Query psy4974
Match_columns 345
No_of_seqs 415 out of 2713
Neff 10.3
Searched_HMMs 46136
Date Fri Aug 16 22:35:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4974.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4974hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2984|consensus 100.0 2.8E-36 6.1E-41 233.9 14.9 257 70-342 19-276 (277)
2 PLN02824 hydrolase, alpha/beta 100.0 1.3E-33 2.8E-38 248.6 27.1 254 74-342 10-294 (294)
3 PRK00870 haloalkane dehalogena 100.0 2E-32 4.4E-37 241.7 23.4 255 69-342 16-301 (302)
4 TIGR02240 PHA_depoly_arom poly 100.0 5.4E-32 1.2E-36 236.0 25.1 249 74-343 4-267 (276)
5 PRK03592 haloalkane dehalogena 100.0 6.1E-32 1.3E-36 238.0 25.0 250 74-343 9-290 (295)
6 PLN02679 hydrolase, alpha/beta 100.0 2.7E-31 5.9E-36 239.4 27.8 251 74-343 63-358 (360)
7 KOG4178|consensus 100.0 1.7E-31 3.7E-36 225.3 22.6 257 69-343 19-321 (322)
8 PRK10349 carboxylesterase BioH 100.0 7.9E-31 1.7E-35 226.2 23.9 233 83-341 3-255 (256)
9 PLN02578 hydrolase 100.0 3.9E-30 8.5E-35 231.6 28.2 245 75-340 69-353 (354)
10 TIGR03343 biphenyl_bphD 2-hydr 100.0 5.1E-30 1.1E-34 224.3 27.1 243 81-341 19-282 (282)
11 TIGR03056 bchO_mg_che_rel puta 100.0 4.9E-30 1.1E-34 223.8 25.5 248 74-340 8-278 (278)
12 PRK06489 hypothetical protein; 100.0 6.4E-30 1.4E-34 230.8 27.0 254 77-345 45-360 (360)
13 PRK03204 haloalkane dehalogena 100.0 9.7E-30 2.1E-34 222.5 25.6 249 71-339 13-285 (286)
14 PLN02965 Probable pheophorbida 100.0 3.8E-30 8.2E-35 221.7 21.0 229 95-343 5-254 (255)
15 PLN03087 BODYGUARD 1 domain co 100.0 2.5E-29 5.5E-34 230.0 26.6 252 73-342 177-479 (481)
16 PLN02385 hydrolase; alpha/beta 100.0 4.6E-29 1E-33 224.5 26.1 244 77-343 67-346 (349)
17 PRK10673 acyl-CoA esterase; Pr 100.0 5.6E-29 1.2E-33 214.5 25.2 226 92-341 15-254 (255)
18 TIGR02427 protocat_pcaD 3-oxoa 100.0 5.6E-29 1.2E-33 212.9 23.1 237 84-340 2-251 (251)
19 TIGR03611 RutD pyrimidine util 100.0 7.4E-29 1.6E-33 213.4 24.0 237 84-340 1-256 (257)
20 PRK10749 lysophospholipase L2; 100.0 8.8E-29 1.9E-33 220.8 24.1 250 74-343 33-330 (330)
21 PHA02857 monoglyceride lipase; 100.0 2.4E-28 5.2E-33 213.1 26.3 247 75-344 4-275 (276)
22 PRK08775 homoserine O-acetyltr 100.0 6.7E-29 1.5E-33 222.8 23.2 253 74-345 38-342 (343)
23 TIGR01250 pro_imino_pep_2 prol 100.0 2.7E-28 5.9E-33 213.2 26.2 251 74-340 4-288 (288)
24 PLN03084 alpha/beta hydrolase 100.0 6.9E-28 1.5E-32 216.5 27.7 246 77-340 110-382 (383)
25 PF12697 Abhydrolase_6: Alpha/ 100.0 3.7E-29 8.1E-34 210.6 17.9 220 96-334 1-228 (228)
26 PRK07581 hypothetical protein; 100.0 4.1E-28 8.9E-33 217.7 24.6 255 74-343 18-337 (339)
27 TIGR01738 bioH putative pimelo 100.0 4.9E-28 1.1E-32 206.4 22.9 224 90-339 1-245 (245)
28 PLN02298 hydrolase, alpha/beta 100.0 1.6E-27 3.6E-32 213.1 25.6 247 75-342 36-317 (330)
29 TIGR01392 homoserO_Ac_trn homo 100.0 4.7E-28 1E-32 218.0 21.7 252 76-340 10-351 (351)
30 PRK11126 2-succinyl-6-hydroxy- 100.0 1.4E-27 3E-32 204.2 22.6 222 93-341 2-241 (242)
31 PRK00175 metX homoserine O-ace 100.0 1.3E-27 2.9E-32 216.8 21.4 254 75-343 26-375 (379)
32 PLN02211 methyl indole-3-aceta 100.0 2.1E-27 4.7E-32 205.9 21.4 242 79-341 4-269 (273)
33 KOG4409|consensus 100.0 3.7E-27 8E-32 199.6 21.8 251 74-342 67-364 (365)
34 KOG1454|consensus 100.0 1.1E-27 2.4E-32 210.6 16.5 235 92-342 57-324 (326)
35 PRK14875 acetoin dehydrogenase 100.0 1.8E-26 4E-31 209.8 24.2 244 75-341 112-370 (371)
36 TIGR03695 menH_SHCHC 2-succiny 99.9 2.1E-26 4.6E-31 196.6 20.6 227 94-340 2-251 (251)
37 PLN02894 hydrolase, alpha/beta 99.9 1.4E-25 3.1E-30 204.4 25.6 245 83-343 93-386 (402)
38 PLN02652 hydrolase; alpha/beta 99.9 2.9E-25 6.4E-30 200.8 26.0 239 80-342 119-387 (395)
39 TIGR01249 pro_imino_pep_1 prol 99.9 3.6E-25 7.8E-30 195.7 24.6 247 74-340 6-303 (306)
40 COG2267 PldB Lysophospholipase 99.9 5.8E-25 1.3E-29 191.6 24.4 251 74-345 12-297 (298)
41 COG1647 Esterase/lipase [Gener 99.9 5E-25 1.1E-29 174.5 18.6 222 94-341 16-243 (243)
42 PLN02980 2-oxoglutarate decarb 99.9 9.1E-25 2E-29 227.4 24.6 243 84-343 1360-1640(1655)
43 PLN02511 hydrolase 99.9 6.6E-25 1.4E-29 199.2 17.0 252 74-342 73-365 (388)
44 KOG1455|consensus 99.9 5.5E-24 1.2E-28 177.2 20.8 247 76-342 32-312 (313)
45 PRK05855 short chain dehydroge 99.9 6.8E-24 1.5E-28 204.2 24.6 249 74-342 5-292 (582)
46 PRK06765 homoserine O-acetyltr 99.9 2.7E-23 5.7E-28 187.3 23.6 261 78-341 37-387 (389)
47 KOG2382|consensus 99.9 1.2E-23 2.6E-28 178.0 18.9 232 92-342 51-313 (315)
48 PRK13604 luxD acyl transferase 99.9 7E-23 1.5E-27 175.4 22.0 224 74-324 11-246 (307)
49 TIGR01607 PST-A Plasmodium sub 99.9 5.9E-23 1.3E-27 182.8 21.4 243 79-340 5-331 (332)
50 PRK05077 frsA fermentation/res 99.9 5E-22 1.1E-26 181.2 25.6 215 94-343 195-413 (414)
51 PRK10985 putative hydrolase; P 99.9 1.4E-21 3.1E-26 173.9 21.1 236 93-342 58-320 (324)
52 TIGR03100 hydr1_PEP hydrolase, 99.9 9.9E-21 2.1E-25 164.4 21.1 225 93-341 26-274 (274)
53 PRK10566 esterase; Provisional 99.9 1.9E-20 4E-25 160.8 19.8 214 84-342 15-248 (249)
54 PLN02872 triacylglycerol lipas 99.9 1.8E-20 3.8E-25 169.0 20.0 259 69-343 41-390 (395)
55 PF00561 Abhydrolase_1: alpha/ 99.9 6E-21 1.3E-25 161.4 16.0 202 122-337 1-230 (230)
56 PRK11071 esterase YqiA; Provis 99.9 1.8E-20 3.9E-25 153.2 17.6 184 94-340 2-189 (190)
57 TIGR01836 PHA_synth_III_C poly 99.9 1.3E-19 2.8E-24 163.1 21.7 240 80-341 46-349 (350)
58 PF12695 Abhydrolase_5: Alpha/ 99.8 1.7E-19 3.6E-24 141.6 14.9 142 95-322 1-145 (145)
59 TIGR01838 PHA_synth_I poly(R)- 99.8 1.2E-18 2.6E-23 161.5 19.4 221 93-329 188-462 (532)
60 COG0596 MhpC Predicted hydrola 99.8 6E-18 1.3E-22 145.0 22.0 239 80-340 8-280 (282)
61 KOG1552|consensus 99.8 1.4E-18 3.1E-23 142.2 14.0 190 93-343 60-253 (258)
62 PRK07868 acyl-CoA synthetase; 99.8 7E-18 1.5E-22 170.5 21.5 231 93-343 67-362 (994)
63 COG3208 GrsT Predicted thioest 99.8 1E-16 2.3E-21 130.5 21.0 216 93-341 7-235 (244)
64 PRK11460 putative hydrolase; P 99.8 2E-17 4.3E-22 139.8 17.1 182 91-339 14-209 (232)
65 COG2021 MET2 Homoserine acetyl 99.8 2.3E-16 5E-21 135.8 22.0 255 78-341 32-367 (368)
66 KOG2564|consensus 99.8 3.6E-17 7.8E-22 134.2 16.1 217 93-343 74-328 (343)
67 PLN02442 S-formylglutathione h 99.8 1.7E-16 3.8E-21 138.2 21.1 188 92-324 46-264 (283)
68 PF06342 DUF1057: Alpha/beta h 99.8 1.5E-16 3.2E-21 132.1 18.6 234 83-339 22-296 (297)
69 KOG4391|consensus 99.8 1.4E-17 3.1E-22 131.5 11.8 214 80-344 63-284 (300)
70 PF00326 Peptidase_S9: Prolyl 99.7 5.7E-17 1.2E-21 135.7 16.2 197 110-344 3-211 (213)
71 COG1506 DAP2 Dipeptidyl aminop 99.7 1.2E-16 2.5E-21 153.5 19.7 227 80-344 374-618 (620)
72 COG0429 Predicted hydrolase of 99.7 2.1E-16 4.5E-21 133.9 16.5 235 93-342 75-340 (345)
73 KOG4667|consensus 99.7 2.2E-16 4.8E-21 124.8 14.2 213 89-339 30-255 (269)
74 TIGR03101 hydr2_PEP hydrolase, 99.7 1.7E-16 3.8E-21 135.4 14.8 106 93-215 25-136 (266)
75 TIGR02821 fghA_ester_D S-formy 99.7 3.2E-15 7E-20 129.9 21.6 202 93-341 42-273 (275)
76 PF02230 Abhydrolase_2: Phosph 99.7 2.7E-15 5.9E-20 125.7 19.3 194 89-342 10-215 (216)
77 PF03096 Ndr: Ndr family; Int 99.7 4.1E-15 8.8E-20 125.2 19.9 251 75-342 2-279 (283)
78 PLN00021 chlorophyllase 99.7 1.1E-15 2.3E-20 134.1 16.5 172 93-328 52-246 (313)
79 PF00975 Thioesterase: Thioest 99.6 6.8E-14 1.5E-18 118.5 22.3 215 94-339 1-229 (229)
80 PF06500 DUF1100: Alpha/beta h 99.6 1.3E-14 2.8E-19 128.6 18.1 233 74-342 167-409 (411)
81 TIGR01840 esterase_phb esteras 99.6 1.3E-14 2.7E-19 121.4 16.6 173 92-309 12-195 (212)
82 KOG1838|consensus 99.6 3.7E-14 8.1E-19 124.7 19.7 243 72-327 93-368 (409)
83 KOG2931|consensus 99.6 1.5E-13 3.2E-18 114.2 21.3 251 74-341 24-305 (326)
84 PF01738 DLH: Dienelactone hyd 99.6 2.2E-14 4.7E-19 120.5 16.2 178 93-342 14-217 (218)
85 PF05448 AXE1: Acetyl xylan es 99.6 2.2E-13 4.9E-18 119.6 22.9 240 75-342 60-320 (320)
86 PRK10162 acetyl esterase; Prov 99.6 6.5E-14 1.4E-18 124.2 19.3 217 92-345 80-318 (318)
87 COG0400 Predicted esterase [Ge 99.6 7E-14 1.5E-18 114.1 16.2 178 92-341 17-204 (207)
88 COG2945 Predicted hydrolase of 99.6 1.4E-13 2.9E-18 107.5 15.9 181 83-340 17-205 (210)
89 TIGR01849 PHB_depoly_PhaZ poly 99.6 6.3E-13 1.4E-17 118.9 21.4 230 94-342 103-406 (406)
90 TIGR01839 PHA_synth_II poly(R) 99.5 1.7E-12 3.8E-17 119.5 22.6 208 94-323 216-482 (560)
91 COG0412 Dienelactone hydrolase 99.5 1.6E-12 3.4E-17 109.6 19.4 180 94-344 28-235 (236)
92 PF06821 Ser_hydrolase: Serine 99.5 9.5E-14 2.1E-18 110.8 11.3 155 96-326 1-157 (171)
93 PF05728 UPF0227: Uncharacteri 99.5 1.2E-12 2.7E-17 105.6 17.3 177 96-339 2-186 (187)
94 TIGR03230 lipo_lipase lipoprot 99.5 1.6E-13 3.6E-18 124.0 13.5 110 88-214 36-155 (442)
95 cd00707 Pancreat_lipase_like P 99.5 5.5E-14 1.2E-18 121.6 9.6 117 81-214 24-148 (275)
96 COG4757 Predicted alpha/beta h 99.5 6.9E-13 1.5E-17 106.4 11.6 241 79-339 13-280 (281)
97 PRK10115 protease 2; Provision 99.5 3.7E-12 8E-17 123.5 18.7 211 79-323 424-654 (686)
98 COG3571 Predicted hydrolase of 99.5 1.2E-11 2.6E-16 93.5 17.1 189 90-341 11-210 (213)
99 PF02273 Acyl_transf_2: Acyl t 99.5 6.4E-12 1.4E-16 101.8 16.5 223 74-324 4-239 (294)
100 KOG2624|consensus 99.4 6.4E-12 1.4E-16 112.3 17.1 265 69-342 45-398 (403)
101 COG3458 Acetyl esterase (deace 99.4 1.7E-12 3.6E-17 106.7 11.9 239 76-341 61-316 (321)
102 TIGR03502 lipase_Pla1_cef extr 99.4 5.4E-12 1.2E-16 121.1 16.4 111 74-198 420-575 (792)
103 KOG2565|consensus 99.4 2.4E-11 5.2E-16 104.1 17.9 123 75-214 127-265 (469)
104 PF08538 DUF1749: Protein of u 99.4 3.5E-12 7.6E-17 108.6 12.7 224 94-340 34-303 (303)
105 KOG3043|consensus 99.4 1.1E-11 2.4E-16 99.2 14.6 196 74-342 20-240 (242)
106 TIGR00976 /NonD putative hydro 99.4 5E-12 1.1E-16 120.4 15.1 117 80-214 5-133 (550)
107 PF06028 DUF915: Alpha/beta hy 99.4 7.5E-12 1.6E-16 105.8 13.6 214 94-340 12-253 (255)
108 PF10230 DUF2305: Uncharacteri 99.4 1.2E-10 2.7E-15 100.1 19.7 214 94-322 3-264 (266)
109 PF12740 Chlorophyllase2: Chlo 99.3 3.3E-11 7.2E-16 100.9 13.9 171 94-328 18-211 (259)
110 COG3545 Predicted esterase of 99.3 1.9E-10 4E-15 89.1 16.0 172 94-341 3-178 (181)
111 COG3319 Thioesterase domains o 99.3 2E-10 4.3E-15 96.8 17.1 100 94-214 1-104 (257)
112 PRK10252 entF enterobactin syn 99.3 1.5E-10 3.3E-15 121.7 19.7 207 94-328 1069-1281(1296)
113 PF09752 DUF2048: Uncharacteri 99.3 1.2E-10 2.7E-15 100.7 15.5 228 92-340 91-347 (348)
114 PRK05371 x-prolyl-dipeptidyl a 99.3 1.9E-10 4.1E-15 112.5 18.2 211 113-343 271-520 (767)
115 PF07859 Abhydrolase_3: alpha/ 99.3 3.4E-11 7.4E-16 100.6 11.4 190 96-324 1-210 (211)
116 PF12146 Hydrolase_4: Putative 99.3 3.1E-11 6.8E-16 83.1 7.9 76 81-173 1-79 (79)
117 KOG2112|consensus 99.2 5.6E-10 1.2E-14 89.1 14.2 186 94-334 4-200 (206)
118 KOG2551|consensus 99.2 1.4E-09 3E-14 87.5 16.0 186 93-340 5-218 (230)
119 KOG2100|consensus 99.2 5.4E-10 1.2E-14 109.0 16.1 223 75-342 501-747 (755)
120 COG3243 PhaC Poly(3-hydroxyalk 99.2 4.1E-10 8.9E-15 98.8 13.7 211 93-325 107-373 (445)
121 PF03959 FSH1: Serine hydrolas 99.2 1.9E-10 4.2E-15 95.8 10.9 175 93-326 4-205 (212)
122 PF10503 Esterase_phd: Esteras 99.1 3.8E-09 8.1E-14 87.4 16.7 113 93-214 16-133 (220)
123 PRK04940 hypothetical protein; 99.1 1.4E-08 3.1E-13 80.4 19.2 118 178-340 60-178 (180)
124 PF06057 VirJ: Bacterial virul 99.1 5.5E-10 1.2E-14 88.5 10.7 181 95-341 4-191 (192)
125 KOG3975|consensus 99.1 2E-08 4.4E-13 81.8 19.8 245 74-339 3-300 (301)
126 KOG1515|consensus 99.1 1.8E-09 3.8E-14 94.8 14.2 216 93-342 90-335 (336)
127 PF02129 Peptidase_S15: X-Pro 99.1 4.6E-09 9.9E-14 91.3 16.6 104 94-215 21-138 (272)
128 PF03403 PAF-AH_p_II: Platelet 99.1 4.7E-10 1E-14 101.1 9.9 170 94-324 101-317 (379)
129 COG0657 Aes Esterase/lipase [L 99.1 1E-08 2.2E-13 91.0 18.3 212 93-340 79-308 (312)
130 PF07224 Chlorophyllase: Chlor 99.1 9.8E-10 2.1E-14 90.3 10.5 104 94-215 47-159 (307)
131 KOG2281|consensus 99.1 1.3E-09 2.9E-14 99.6 11.3 209 93-341 642-866 (867)
132 COG4099 Predicted peptidase [G 99.1 4E-09 8.7E-14 88.1 12.6 153 80-308 170-341 (387)
133 PTZ00472 serine carboxypeptida 99.0 9E-08 1.9E-12 88.8 22.8 125 73-214 48-217 (462)
134 PF07819 PGAP1: PGAP1-like pro 99.0 4.4E-09 9.5E-14 88.1 12.7 104 94-215 5-125 (225)
135 COG4188 Predicted dienelactone 99.0 3.9E-10 8.5E-15 98.0 6.0 205 94-331 72-303 (365)
136 KOG4627|consensus 99.0 5.2E-09 1.1E-13 82.8 10.3 183 92-327 66-252 (270)
137 smart00824 PKS_TE Thioesterase 99.0 7E-08 1.5E-12 80.1 16.9 201 98-338 2-211 (212)
138 PF08840 BAAT_C: BAAT / Acyl-C 98.9 2.7E-09 5.8E-14 88.8 6.3 148 165-323 6-163 (213)
139 PF01674 Lipase_2: Lipase (cla 98.9 1.4E-09 3.1E-14 89.8 4.2 91 94-199 2-96 (219)
140 KOG1553|consensus 98.8 1.1E-08 2.5E-13 87.0 7.0 103 91-214 241-346 (517)
141 PF05705 DUF829: Eukaryotic pr 98.8 5.7E-07 1.2E-11 76.6 16.2 214 95-339 1-240 (240)
142 PLN02733 phosphatidylcholine-s 98.8 5E-08 1.1E-12 89.2 10.2 93 107-215 107-203 (440)
143 KOG3847|consensus 98.8 6.5E-08 1.4E-12 81.5 9.7 184 94-340 119-346 (399)
144 PF12715 Abhydrolase_7: Abhydr 98.8 5.6E-08 1.2E-12 85.3 9.8 105 94-213 116-260 (390)
145 PF05677 DUF818: Chlamydia CHL 98.7 1.9E-06 4.1E-11 74.3 18.4 88 94-199 138-236 (365)
146 PF03583 LIP: Secretory lipase 98.7 9.3E-07 2E-11 77.2 16.9 59 281-339 218-282 (290)
147 COG4814 Uncharacterized protei 98.7 5.1E-07 1.1E-11 74.1 13.7 210 95-341 47-286 (288)
148 COG3509 LpqC Poly(3-hydroxybut 98.7 3.6E-07 7.9E-12 76.9 11.3 132 74-213 37-179 (312)
149 PF00151 Lipase: Lipase; Inte 98.6 7.5E-08 1.6E-12 85.2 7.1 106 91-214 69-188 (331)
150 KOG3253|consensus 98.6 8.1E-07 1.8E-11 81.3 12.9 158 93-325 176-348 (784)
151 KOG4840|consensus 98.6 2E-06 4.3E-11 69.2 13.4 102 94-215 37-146 (299)
152 PF11339 DUF3141: Protein of u 98.6 1.4E-05 2.9E-10 72.7 20.0 56 160-215 117-177 (581)
153 PF00450 Peptidase_S10: Serine 98.6 1.3E-05 2.7E-10 74.2 20.7 127 73-215 12-183 (415)
154 PF12048 DUF3530: Protein of u 98.5 2.7E-05 5.8E-10 68.6 19.2 216 74-342 64-309 (310)
155 PRK10439 enterobactin/ferric e 98.5 4E-06 8.7E-11 76.7 13.6 105 93-213 209-323 (411)
156 PF05990 DUF900: Alpha/beta hy 98.4 2.5E-06 5.4E-11 71.9 10.6 106 92-214 17-138 (233)
157 COG3150 Predicted esterase [Ge 98.4 2.1E-05 4.6E-10 60.6 13.8 89 96-214 2-92 (191)
158 KOG3101|consensus 98.4 1.6E-06 3.4E-11 69.2 7.4 197 93-323 44-262 (283)
159 COG1075 LipA Predicted acetylt 98.3 1.9E-06 4E-11 76.9 8.1 103 94-216 60-167 (336)
160 PF10340 DUF2424: Protein of u 98.3 1.5E-05 3.2E-10 70.7 13.4 119 80-216 104-238 (374)
161 PF04301 DUF452: Protein of un 98.3 5.4E-05 1.2E-09 62.1 15.0 182 93-325 11-205 (213)
162 KOG1551|consensus 98.3 2.5E-05 5.4E-10 64.7 12.9 227 94-344 114-368 (371)
163 PLN02606 palmitoyl-protein thi 98.3 1.9E-05 4.1E-10 67.7 12.2 97 94-212 27-131 (306)
164 PF05057 DUF676: Putative seri 98.2 3.5E-06 7.6E-11 70.4 7.4 85 94-197 5-97 (217)
165 COG2936 Predicted acyl esteras 98.2 0.0001 2.3E-09 68.6 15.9 125 75-214 22-160 (563)
166 COG1073 Hydrolases of the alph 98.1 3.3E-05 7.2E-10 67.5 12.0 66 278-343 227-298 (299)
167 COG4782 Uncharacterized protei 98.0 4.6E-05 1E-09 66.4 9.9 107 92-214 115-235 (377)
168 PLN02633 palmitoyl protein thi 98.0 0.00045 9.8E-09 59.5 15.7 98 94-212 26-130 (314)
169 PF08386 Abhydrolase_4: TAP-li 98.0 3E-05 6.4E-10 56.5 7.2 60 282-341 34-93 (103)
170 PF10142 PhoPQ_related: PhoPQ- 98.0 0.00027 5.8E-09 63.1 13.8 157 168-342 159-320 (367)
171 PLN03016 sinapoylglucose-malat 97.9 0.012 2.7E-07 54.3 25.0 60 282-342 347-431 (433)
172 PF00756 Esterase: Putative es 97.9 2E-05 4.3E-10 67.6 5.9 52 164-215 98-152 (251)
173 cd00312 Esterase_lipase Estera 97.9 7.5E-05 1.6E-09 70.7 9.7 110 92-214 94-214 (493)
174 PLN02209 serine carboxypeptida 97.8 0.0081 1.8E-07 55.5 22.0 59 282-341 351-434 (437)
175 PF02450 LCAT: Lecithin:choles 97.8 0.0002 4.4E-09 65.3 10.6 113 79-215 37-162 (389)
176 KOG3724|consensus 97.8 0.00039 8.4E-09 66.2 12.3 100 94-214 90-221 (973)
177 COG2272 PnbA Carboxylesterase 97.7 0.00016 3.4E-09 65.8 8.1 119 91-214 92-218 (491)
178 KOG2541|consensus 97.7 0.00035 7.7E-09 58.3 9.0 98 94-212 24-127 (296)
179 KOG1282|consensus 97.7 0.018 3.9E-07 53.1 20.8 60 283-342 364-448 (454)
180 COG1505 Serine proteases of th 97.6 0.00056 1.2E-08 63.4 10.4 224 80-342 403-646 (648)
181 PF05577 Peptidase_S28: Serine 97.6 0.00041 8.8E-09 64.6 9.9 106 95-214 30-149 (434)
182 COG4553 DepA Poly-beta-hydroxy 97.6 0.016 3.5E-07 49.2 17.6 103 94-215 104-211 (415)
183 KOG3967|consensus 97.5 0.00055 1.2E-08 55.0 8.2 110 93-214 101-228 (297)
184 PF11144 DUF2920: Protein of u 97.5 0.0016 3.5E-08 58.2 11.7 36 179-214 185-220 (403)
185 PF05576 Peptidase_S37: PS-10 97.5 0.0016 3.6E-08 57.9 11.3 113 83-213 53-169 (448)
186 COG0627 Predicted esterase [Ge 97.5 0.00051 1.1E-08 60.3 8.1 38 179-216 153-190 (316)
187 PF07082 DUF1350: Protein of u 97.4 0.026 5.6E-07 47.2 17.2 101 95-213 19-125 (250)
188 COG3946 VirJ Type IV secretory 97.3 0.00061 1.3E-08 60.2 6.8 85 93-200 260-348 (456)
189 PF02089 Palm_thioest: Palmito 97.3 0.00044 9.5E-09 59.0 5.7 102 94-212 6-115 (279)
190 PLN02213 sinapoylglucose-malat 97.2 0.11 2.3E-06 46.3 20.2 59 282-341 233-316 (319)
191 COG2830 Uncharacterized protei 97.2 0.017 3.7E-07 44.5 12.2 179 95-324 13-203 (214)
192 cd00741 Lipase Lipase. Lipase 97.1 0.0014 3E-08 51.5 6.4 39 176-214 26-68 (153)
193 COG1770 PtrB Protease II [Amin 97.1 0.028 6.1E-07 53.2 15.5 109 93-214 448-563 (682)
194 PF00135 COesterase: Carboxyle 97.1 0.00062 1.3E-08 65.1 4.8 115 93-214 125-246 (535)
195 PF01764 Lipase_3: Lipase (cla 97.0 0.0024 5.2E-08 49.2 6.5 37 163-199 49-85 (140)
196 KOG2183|consensus 96.9 0.0045 9.8E-08 55.0 8.0 106 91-211 78-200 (492)
197 COG2819 Predicted hydrolase of 96.8 0.012 2.7E-07 49.7 9.8 38 177-214 136-173 (264)
198 PF11187 DUF2974: Protein of u 96.6 0.0056 1.2E-07 51.2 6.3 50 165-215 72-125 (224)
199 PLN02517 phosphatidylcholine-s 96.6 0.0051 1.1E-07 57.7 6.5 90 108-214 156-264 (642)
200 KOG2237|consensus 96.5 0.023 5.1E-07 53.4 9.9 113 92-214 469-585 (712)
201 KOG1202|consensus 96.4 0.19 4.1E-06 51.1 15.8 99 90-215 2120-2221(2376)
202 KOG2369|consensus 96.4 0.0049 1.1E-07 55.9 4.8 88 107-212 123-224 (473)
203 KOG2521|consensus 96.3 0.058 1.2E-06 47.9 11.1 232 92-342 37-290 (350)
204 PF06441 EHN: Epoxide hydrolas 96.1 0.015 3.3E-07 42.7 5.4 39 74-113 70-111 (112)
205 cd00519 Lipase_3 Lipase (class 96.1 0.011 2.5E-07 49.8 5.4 28 172-199 122-149 (229)
206 PLN02162 triacylglycerol lipas 95.8 0.042 9E-07 50.3 7.8 35 163-197 263-297 (475)
207 COG4947 Uncharacterized protei 95.8 0.048 1E-06 42.6 6.9 37 178-214 101-137 (227)
208 PLN00413 triacylglycerol lipas 95.7 0.05 1.1E-06 50.0 7.9 52 163-214 269-328 (479)
209 COG4287 PqaA PhoPQ-activated p 95.6 0.12 2.5E-06 45.6 9.4 157 170-341 226-386 (507)
210 PLN02454 triacylglycerol lipas 95.3 0.031 6.7E-07 50.6 5.2 34 165-198 213-248 (414)
211 KOG1516|consensus 95.3 0.074 1.6E-06 51.1 8.2 114 93-214 112-233 (545)
212 PF06259 Abhydrolase_8: Alpha/ 95.3 0.076 1.6E-06 42.5 6.8 54 161-214 87-145 (177)
213 PLN02571 triacylglycerol lipas 95.2 0.033 7.1E-07 50.5 4.9 37 162-198 208-246 (413)
214 KOG2182|consensus 95.1 0.15 3.3E-06 46.8 9.0 83 118-214 115-208 (514)
215 PF04083 Abhydro_lipase: Parti 95.1 0.053 1.1E-06 35.2 4.4 41 69-110 9-59 (63)
216 PF01083 Cutinase: Cutinase; 94.9 0.068 1.5E-06 43.1 5.8 48 167-214 70-123 (179)
217 KOG4372|consensus 94.9 0.03 6.5E-07 50.0 3.9 102 80-197 67-169 (405)
218 PLN02408 phospholipase A1 94.9 0.046 1E-06 48.8 5.0 35 164-198 184-220 (365)
219 COG2382 Fes Enterochelin ester 94.9 0.16 3.5E-06 43.7 8.0 36 179-214 178-213 (299)
220 PLN02934 triacylglycerol lipas 94.7 0.053 1.1E-06 50.2 5.0 36 162-197 305-340 (515)
221 PF11288 DUF3089: Protein of u 94.6 0.078 1.7E-06 43.4 5.3 39 161-199 77-116 (207)
222 PF05277 DUF726: Protein of un 94.5 0.16 3.4E-06 45.3 7.5 41 176-216 218-263 (345)
223 PLN02324 triacylglycerol lipas 94.3 0.076 1.6E-06 48.1 5.0 35 164-198 199-235 (415)
224 PLN02310 triacylglycerol lipas 94.3 0.2 4.3E-06 45.4 7.6 37 162-198 189-229 (405)
225 TIGR03712 acc_sec_asp2 accesso 94.0 4 8.6E-05 37.9 15.1 106 85-214 280-391 (511)
226 PLN02753 triacylglycerol lipas 93.7 0.11 2.4E-06 48.4 4.9 37 162-198 291-332 (531)
227 PLN02802 triacylglycerol lipas 93.7 0.11 2.4E-06 48.2 4.9 35 164-198 314-350 (509)
228 PLN02719 triacylglycerol lipas 93.3 0.14 3E-06 47.6 4.9 36 163-198 278-318 (518)
229 PLN03037 lipase class 3 family 93.1 0.14 3.1E-06 47.6 4.7 36 163-198 299-338 (525)
230 PLN02761 lipase class 3 family 93.1 0.15 3.3E-06 47.5 4.8 36 162-197 272-313 (527)
231 KOG2029|consensus 92.7 0.52 1.1E-05 44.4 7.6 49 165-213 510-572 (697)
232 KOG4569|consensus 91.9 0.27 5.9E-06 44.0 4.8 37 162-198 155-191 (336)
233 PF06850 PHB_depo_C: PHB de-po 91.7 0.38 8.2E-06 38.8 4.9 61 282-342 134-202 (202)
234 PF09949 DUF2183: Uncharacteri 91.1 1.8 3.8E-05 31.1 7.4 89 104-208 7-97 (100)
235 PLN02847 triacylglycerol lipas 90.8 0.44 9.6E-06 45.1 5.1 21 178-198 251-271 (633)
236 COG2939 Carboxypeptidase C (ca 90.4 2.3 5E-05 39.6 9.2 103 93-211 101-234 (498)
237 COG5153 CVT17 Putative lipase 89.6 0.75 1.6E-05 39.3 5.1 40 170-211 268-307 (425)
238 KOG4540|consensus 89.6 0.75 1.6E-05 39.3 5.1 40 170-211 268-307 (425)
239 PF08237 PE-PPE: PE-PPE domain 87.9 3 6.5E-05 35.0 7.6 53 160-212 28-88 (225)
240 PF07519 Tannase: Tannase and 84.8 1.4 2.9E-05 41.6 4.5 60 283-342 354-427 (474)
241 COG1448 TyrB Aspartate/tyrosin 83.6 22 0.00047 32.1 11.0 86 95-212 173-264 (396)
242 KOG1283|consensus 82.4 5.9 0.00013 34.7 6.8 107 92-214 30-167 (414)
243 KOG4388|consensus 80.4 12 0.00027 35.6 8.6 100 95-214 398-509 (880)
244 KOG2385|consensus 76.9 4.2 9.2E-05 37.9 4.6 43 175-217 444-491 (633)
245 KOG2872|consensus 75.6 6.2 0.00013 33.9 4.9 75 94-187 253-337 (359)
246 PF07519 Tannase: Tannase and 73.8 5.9 0.00013 37.4 5.0 39 177-215 114-152 (474)
247 PRK12467 peptide synthase; Pro 72.8 16 0.00035 44.2 9.1 96 94-210 3693-3792(3956)
248 PF03283 PAE: Pectinacetyleste 71.8 18 0.00039 32.8 7.4 38 177-214 155-196 (361)
249 smart00827 PKS_AT Acyl transfe 68.3 6.8 0.00015 34.3 3.9 31 168-198 72-102 (298)
250 PF00698 Acyl_transf_1: Acyl t 67.9 4.4 9.5E-05 36.0 2.6 31 168-198 74-104 (318)
251 PF09994 DUF2235: Uncharacteri 67.7 41 0.00089 29.2 8.5 28 171-198 84-112 (277)
252 TIGR03131 malonate_mdcH malona 66.2 8.1 0.00017 33.8 3.9 31 168-198 66-96 (295)
253 cd01714 ETF_beta The electron 63.9 28 0.00062 28.6 6.5 39 160-199 92-134 (202)
254 COG4822 CbiK Cobalamin biosynt 61.9 38 0.00083 27.9 6.5 61 94-184 139-200 (265)
255 TIGR00128 fabD malonyl CoA-acy 61.1 11 0.00023 32.9 3.7 30 170-199 74-104 (290)
256 PF06792 UPF0261: Uncharacteri 54.9 87 0.0019 28.8 8.3 100 97-209 4-126 (403)
257 KOG0781|consensus 54.6 41 0.00089 31.5 6.2 85 100-209 445-538 (587)
258 cd07198 Patatin Patatin-like p 54.2 22 0.00047 28.2 4.2 33 168-200 16-48 (172)
259 PRK10279 hypothetical protein; 54.1 18 0.00039 31.8 3.9 33 168-200 23-55 (300)
260 cd07225 Pat_PNPLA6_PNPLA7 Pata 53.7 20 0.00044 31.7 4.2 32 168-199 33-64 (306)
261 COG0529 CysC Adenylylsulfate k 52.3 94 0.002 25.1 7.1 36 94-129 23-59 (197)
262 cd07207 Pat_ExoU_VipD_like Exo 52.0 24 0.00051 28.6 4.1 32 168-199 17-48 (194)
263 cd07210 Pat_hypo_W_succinogene 50.0 29 0.00063 29.0 4.4 31 169-199 19-49 (221)
264 PF10081 Abhydrolase_9: Alpha/ 49.9 27 0.00059 30.2 4.1 52 164-215 92-149 (289)
265 TIGR03709 PPK2_rel_1 polyphosp 49.6 69 0.0015 27.6 6.6 39 93-131 55-94 (264)
266 TIGR03707 PPK2_P_aer polyphosp 49.2 1E+02 0.0022 26.0 7.4 39 93-131 30-69 (230)
267 PRK02399 hypothetical protein; 47.3 1.7E+02 0.0038 26.9 9.0 99 97-208 6-127 (406)
268 COG1752 RssA Predicted esteras 46.5 29 0.00062 30.6 4.1 32 168-199 29-60 (306)
269 cd07228 Pat_NTE_like_bacteria 45.8 35 0.00076 27.1 4.2 31 170-200 20-50 (175)
270 cd07227 Pat_Fungal_NTE1 Fungal 45.7 30 0.00066 29.9 3.9 32 168-199 28-59 (269)
271 PF00837 T4_deiodinase: Iodoth 45.5 1.9E+02 0.0041 24.5 10.3 129 70-214 78-221 (237)
272 TIGR02816 pfaB_fam PfaB family 45.5 25 0.00053 33.8 3.6 31 169-199 255-286 (538)
273 PF03976 PPK2: Polyphosphate k 45.2 20 0.00044 30.1 2.7 39 93-131 30-69 (228)
274 TIGR02884 spore_pdaA delta-lac 44.5 21 0.00046 29.8 2.8 34 95-128 188-221 (224)
275 cd07209 Pat_hypo_Ecoli_Z1214_l 44.3 35 0.00076 28.3 4.0 33 168-200 16-48 (215)
276 cd05312 NAD_bind_1_malic_enz N 44.2 35 0.00075 29.6 4.0 37 95-131 26-69 (279)
277 cd07230 Pat_TGL4-5_like Triacy 43.6 19 0.0004 33.5 2.4 37 168-204 91-127 (421)
278 COG1856 Uncharacterized homolo 43.3 42 0.00091 28.0 4.1 92 95-210 89-187 (275)
279 PF01583 APS_kinase: Adenylyls 42.8 31 0.00068 27.0 3.3 36 94-129 2-38 (156)
280 COG3673 Uncharacterized conser 42.8 2.1E+02 0.0046 25.5 8.4 22 177-198 121-142 (423)
281 COG0541 Ffh Signal recognition 42.1 1.7E+02 0.0036 27.3 8.0 76 109-209 170-247 (451)
282 cd07205 Pat_PNPLA6_PNPLA7_NTE1 42.1 48 0.001 26.3 4.4 31 169-199 19-49 (175)
283 COG0031 CysK Cysteine synthase 41.0 2.5E+02 0.0055 24.7 9.0 123 78-211 147-291 (300)
284 cd07229 Pat_TGL3_like Triacylg 40.3 24 0.00052 32.3 2.6 40 168-207 101-140 (391)
285 PF00448 SRP54: SRP54-type pro 39.8 1.6E+02 0.0034 24.0 7.1 77 108-209 70-148 (196)
286 PF00326 Peptidase_S9: Prolyl 39.2 52 0.0011 26.9 4.4 40 92-131 143-184 (213)
287 COG2939 Carboxypeptidase C (ca 38.1 38 0.00082 31.9 3.5 58 283-341 426-490 (498)
288 PRK14974 cell division protein 37.9 2E+02 0.0044 25.8 8.0 69 116-209 217-287 (336)
289 TIGR02764 spore_ybaN_pdaB poly 37.9 24 0.00052 28.5 2.0 34 95-128 153-188 (191)
290 COG0552 FtsY Signal recognitio 37.6 3E+02 0.0065 24.7 8.7 98 91-220 136-238 (340)
291 cd07231 Pat_SDP1-like Sugar-De 37.6 27 0.00059 30.9 2.4 34 170-203 88-121 (323)
292 cd07232 Pat_PLPL Patain-like p 37.2 27 0.00058 32.3 2.4 38 169-206 86-123 (407)
293 TIGR02873 spore_ylxY probable 36.7 29 0.00063 30.0 2.5 33 95-128 232-264 (268)
294 COG1576 Uncharacterized conser 36.4 1.3E+02 0.0028 23.5 5.6 57 112-195 59-115 (155)
295 PF10605 3HBOH: 3HB-oligomer h 35.4 30 0.00064 33.4 2.4 36 180-215 287-323 (690)
296 PF06309 Torsin: Torsin; Inte 35.0 55 0.0012 24.6 3.4 31 90-121 49-81 (127)
297 TIGR00521 coaBC_dfp phosphopan 34.6 2.4E+02 0.0053 25.9 8.1 88 95-198 114-224 (390)
298 cd07211 Pat_PNPLA8 Patatin-lik 34.6 1.2E+02 0.0027 26.6 6.2 17 181-197 44-60 (308)
299 COG1506 DAP2 Dipeptidyl aminop 34.4 1.1E+02 0.0024 30.1 6.3 38 94-131 552-591 (620)
300 PF02590 SPOUT_MTase: Predicte 33.8 97 0.0021 24.3 4.7 71 112-214 59-129 (155)
301 COG4850 Uncharacterized conser 33.0 1.4E+02 0.0029 26.6 5.8 48 165-212 265-314 (373)
302 cd07208 Pat_hypo_Ecoli_yjju_li 32.8 68 0.0015 27.5 4.2 34 168-201 16-50 (266)
303 COG0331 FabD (acyl-carrier-pro 32.6 53 0.0011 29.1 3.4 22 176-197 83-104 (310)
304 cd07212 Pat_PNPLA9 Patatin-lik 31.3 92 0.002 27.6 4.8 19 181-199 35-53 (312)
305 COG0482 TrmU Predicted tRNA(5- 31.2 97 0.0021 28.0 4.8 33 94-131 5-37 (356)
306 TIGR01425 SRP54_euk signal rec 31.1 1.7E+02 0.0036 27.4 6.5 71 114-209 175-247 (429)
307 TIGR02069 cyanophycinase cyano 31.0 2.1E+02 0.0045 24.5 6.7 42 90-131 25-67 (250)
308 COG3887 Predicted signaling pr 30.9 94 0.002 30.0 4.8 46 165-213 327-378 (655)
309 COG3727 Vsr DNA G:T-mismatch r 29.9 1.1E+02 0.0025 23.1 4.2 14 114-127 101-114 (150)
310 cd07224 Pat_like Patatin-like 28.5 93 0.002 26.2 4.2 33 168-200 17-51 (233)
311 PF12641 Flavodoxin_3: Flavodo 28.4 2.3E+02 0.005 22.3 6.1 61 282-342 39-99 (160)
312 PF02230 Abhydrolase_2: Phosph 28.3 1.4E+02 0.0029 24.6 5.1 39 93-131 155-195 (216)
313 PF12242 Eno-Rase_NADH_b: NAD( 28.1 2E+02 0.0043 19.6 4.7 39 161-199 19-61 (78)
314 COG3946 VirJ Type IV secretory 27.7 2.6E+02 0.0056 25.9 6.8 102 95-211 50-155 (456)
315 PF11713 Peptidase_C80: Peptid 27.2 64 0.0014 25.3 2.7 45 145-190 64-116 (157)
316 cd07206 Pat_TGL3-4-5_SDP1 Tria 26.2 93 0.002 27.4 3.8 30 174-203 93-122 (298)
317 PHA02114 hypothetical protein 25.9 66 0.0014 22.8 2.3 33 95-128 84-116 (127)
318 PRK00103 rRNA large subunit me 25.8 2.4E+02 0.0053 22.1 5.7 54 112-192 59-113 (157)
319 cd07204 Pat_PNPLA_like Patatin 25.6 1.2E+02 0.0025 25.8 4.2 20 181-200 34-53 (243)
320 KOG2805|consensus 25.1 1.6E+02 0.0035 26.0 4.9 61 95-177 8-68 (377)
321 PRK10867 signal recognition pa 25.0 5.7E+02 0.012 24.0 8.9 19 113-131 175-193 (433)
322 PF14253 AbiH: Bacteriophage a 24.9 40 0.00088 28.9 1.4 19 176-194 233-251 (270)
323 KOG1252|consensus 24.9 2.4E+02 0.0052 25.3 6.0 55 75-131 187-249 (362)
324 cd07213 Pat17_PNPLA8_PNPLA9_li 24.7 2.8E+02 0.0062 24.1 6.7 19 181-199 37-55 (288)
325 COG3933 Transcriptional antite 24.5 4.4E+02 0.0096 24.7 7.7 73 94-195 110-182 (470)
326 PF12995 DUF3879: Domain of un 23.5 21 0.00045 27.9 -0.6 16 3-18 124-139 (186)
327 COG3340 PepE Peptidase E [Amin 23.3 2.5E+02 0.0054 23.4 5.4 39 93-131 32-72 (224)
328 PF06180 CbiK: Cobalt chelatas 22.5 2.7E+02 0.0059 24.0 5.9 63 92-184 141-204 (262)
329 cd01819 Patatin_and_cPLA2 Pata 22.4 1.4E+02 0.0031 23.1 4.0 25 172-196 20-46 (155)
330 PRK14194 bifunctional 5,10-met 22.2 1.6E+02 0.0034 26.0 4.4 34 165-198 143-182 (301)
331 PRK14581 hmsF outer membrane N 22.1 1.6E+02 0.0036 29.2 5.0 82 94-186 49-143 (672)
332 TIGR03708 poly_P_AMP_trns poly 22.0 3.6E+02 0.0078 25.8 7.0 40 92-131 38-78 (493)
333 cd07218 Pat_iPLA2 Calcium-inde 22.0 1.5E+02 0.0032 25.3 4.2 20 181-200 33-52 (245)
334 TIGR00959 ffh signal recogniti 21.9 6.1E+02 0.013 23.7 8.5 19 113-131 174-192 (428)
335 KOG1202|consensus 21.8 65 0.0014 34.1 2.2 23 167-189 571-593 (2376)
336 PF05577 Peptidase_S28: Serine 21.1 1.3E+02 0.0029 28.0 4.1 40 283-325 377-416 (434)
337 PF05724 TPMT: Thiopurine S-me 21.1 82 0.0018 26.3 2.4 29 95-129 39-67 (218)
No 1
>KOG2984|consensus
Probab=100.00 E-value=2.8e-36 Score=233.85 Aligned_cols=257 Identities=25% Similarity=0.527 Sum_probs=240.6
Q ss_pred CcceeeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCC
Q psy4974 70 DVFTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQS 148 (345)
Q Consensus 70 ~~~~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s 148 (345)
...++..+.++|.+|.|...|.|+..|+++.|..|+.+..|.+.+..|.+. -++|+++|.|| +|.|
T Consensus 19 ~~~te~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpG-------------YG~S 85 (277)
T KOG2984|consen 19 SDYTESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPG-------------YGTS 85 (277)
T ss_pred chhhhheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCC-------------CCCC
Confidence 334477788999999999999998899999999999888999888777554 49999999999 9999
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHh
Q psy4974 149 LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRR 228 (345)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 228 (345)
.+|.+.+ ..+.+.+++++...+++++..+++.++|+|-||..|+..|+++++.|.++|++++....+......+..++.
T Consensus 86 rPP~Rkf-~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRd 164 (277)
T KOG2984|consen 86 RPPERKF-EVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRD 164 (277)
T ss_pred CCCcccc-hHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHH
Confidence 9999999 888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc
Q psy4974 229 LSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL 308 (345)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~ 308 (345)
...|.+..++.+...|+.+ .+...|..|.+.+.++....+...+...+++++||+|+++|..|++++....-.+....
T Consensus 165 v~kWs~r~R~P~e~~Yg~e--~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~ 242 (277)
T KOG2984|consen 165 VNKWSARGRQPYEDHYGPE--TFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLK 242 (277)
T ss_pred HhhhhhhhcchHHHhcCHH--HHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhc
Confidence 9999999999999999999 99999999999999999888888889999999999999999999999988888888888
Q ss_pred CCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 309 KFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 309 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+.+++.+++.++|.+++..+++|+..+.+||+++
T Consensus 243 ~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 243 SLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred ccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999875
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.3e-33 Score=248.58 Aligned_cols=254 Identities=16% Similarity=0.184 Sum_probs=179.4
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR 153 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~ 153 (345)
..+++++|..++|...|++.|+|||+||+++++ ..|..+++.|+++ |+|+++|+|| ||.|+.+..
T Consensus 10 ~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~-~~w~~~~~~L~~~-~~vi~~DlpG-------------~G~S~~~~~ 74 (294)
T PLN02824 10 TRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNA-DHWRKNTPVLAKS-HRVYAIDLLG-------------YGYSDKPNP 74 (294)
T ss_pred CceEEEcCeEEEEEEcCCCCCeEEEECCCCCCh-hHHHHHHHHHHhC-CeEEEEcCCC-------------CCCCCCCcc
Confidence 678889999999999986447999999999995 9999999999988 8999999999 999976531
Q ss_pred C-C--CCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCC------chhHHHHH
Q psy4974 154 S-F--VPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLT------IDNVRVFE 224 (345)
Q Consensus 154 ~-~--~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~------~~~~~~~~ 224 (345)
. . ....+++++++++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++..... ........
T Consensus 75 ~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~ 154 (294)
T PLN02824 75 RSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIK 154 (294)
T ss_pred ccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHH
Confidence 1 0 0123788999999999999999999999999999999999999999999999999854211 00011111
Q ss_pred HhHhccCC------------C-hhhHHHHHHHcccCCchhhhhHHHH---------HHHHHHHHHhhCchhhhccCCCCC
Q psy4974 225 GMRRLSNW------------S-PMARSEVLKAYDNDVNYITGIFNQY---------VDMVNLIFKSYGRNVYQELLPYVD 282 (345)
Q Consensus 225 ~~~~~~~~------------~-~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~i~ 282 (345)
.+...... . ......+...+...........+.+ ...+..+............+.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 234 (294)
T PLN02824 155 AFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVK 234 (294)
T ss_pred HHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcC
Confidence 11110000 0 0001111111111100001111111 011111111111112234577899
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 283 VPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 283 ~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+|+|+|+|++|.++|.+.++.+.+..++.++++++++||++++|+|+++++.|.+||+++
T Consensus 235 ~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 235 CPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred CCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 999999999999999999999888888889999999999999999999999999999763
No 3
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2e-32 Score=241.74 Aligned_cols=255 Identities=17% Similarity=0.183 Sum_probs=176.3
Q ss_pred CCcceeeeEEEcC-----ceEEEEEcCCC-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCcc
Q psy4974 69 QDVFTEGFFSIKG-----CDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTC 142 (345)
Q Consensus 69 ~~~~~~~~~~~~g-----~~l~~~~~g~~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~ 142 (345)
...+...++++++ .+++|...|++ .|+|||+||++++. ..|..+++.|++.||+|+++|+||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~-~~w~~~~~~L~~~gy~vi~~Dl~G----------- 83 (302)
T PRK00870 16 DYPFAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWS-YLYRKMIPILAAAGHRVIAPDLIG----------- 83 (302)
T ss_pred CCCCCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCch-hhHHHHHHHHHhCCCEEEEECCCC-----------
Confidence 3444578888888 89999998862 36999999999885 999999999987789999999999
Q ss_pred CCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch-hHH
Q psy4974 143 SGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID-NVR 221 (345)
Q Consensus 143 ~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~ 221 (345)
||.|+.+... ...+++++++++.+++++++.++++++||||||.+|+.+|.++|++|+++|++++....... ...
T Consensus 84 --~G~S~~~~~~--~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 159 (302)
T PRK00870 84 --FGRSDKPTRR--EDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPD 159 (302)
T ss_pred --CCCCCCCCCc--ccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchH
Confidence 9999765422 11267889999999999999999999999999999999999999999999999875322111 011
Q ss_pred HHHHhHhccCCChh--------------hHHHHHHHcccCCchhhhhHHHHHHHHHHHHH-------hhCchhhhccCCC
Q psy4974 222 VFEGMRRLSNWSPM--------------ARSEVLKAYDNDVNYITGIFNQYVDMVNLIFK-------SYGRNVYQELLPY 280 (345)
Q Consensus 222 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~ 280 (345)
.+..........+. ........+... +....+............ ..........+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 237 (302)
T PRK00870 160 AFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAP--FPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLER 237 (302)
T ss_pred HHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcc--cCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhc
Confidence 11111110000000 000000111000 000000000000000000 0000112345678
Q ss_pred CCCCEEEEEeCCCCCCChHHHHHHHhhcCCcE---EEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 281 VDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQ---YYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 281 i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+++|+++|+|++|.++|... +.+.+.+++.+ +.+++++||++++|+|+++++.|.+||.++
T Consensus 238 i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 238 WDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred CCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 99999999999999999766 88888888776 889999999999999999999999999764
No 4
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=5.4e-32 Score=236.03 Aligned_cols=249 Identities=19% Similarity=0.246 Sum_probs=175.2
Q ss_pred eeeEEEcCceEEEEEc--CCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKY--GSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~--g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
.++++++|.+++|... ++++++|||+||++++. ..|..+++.|.+. |+|+++|+|| ||.|+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~-~~w~~~~~~L~~~-~~vi~~Dl~G-------------~G~S~~~ 68 (276)
T TIGR02240 4 FRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANL-ELVFPFIEALDPD-LEVIAFDVPG-------------VGGSSTP 68 (276)
T ss_pred EEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcch-HHHHHHHHHhccC-ceEEEECCCC-------------CCCCCCC
Confidence 4567789999999775 34557999999999995 8999999999886 9999999999 9999866
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc--hhHHHHHHhHhc
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI--DNVRVFEGMRRL 229 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~ 229 (345)
...+ +++++++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++...... ............
T Consensus 69 ~~~~----~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 144 (276)
T TIGR02240 69 RHPY----RFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASP 144 (276)
T ss_pred CCcC----cHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCc
Confidence 5444 6788899999999999999999999999999999999999999999999998764211 111111000000
Q ss_pred cCC-Ch-hhHHHHHHHcccCCchhhhhHHHHHH---------HHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCCh
Q psy4974 230 SNW-SP-MARSEVLKAYDNDVNYITGIFNQYVD---------MVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVST 298 (345)
Q Consensus 230 ~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~ 298 (345)
... .. .........+................ ......... .......+.++++|+|+|+|++|+++|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~v~~ 223 (276)
T TIGR02240 145 RRYIQPSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGL-GWTSIHWLHKIQQPTLVLAGDDDPIIPL 223 (276)
T ss_pred hhhhccccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHc-CCchhhHhhcCCCCEEEEEeCCCCcCCH
Confidence 000 00 00000000111000000000000000 000111111 1112345778999999999999999999
Q ss_pred HHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 299 QQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+..+.+.+.++++++++++ +||+++.++|+++++.|.+|+++..
T Consensus 224 ~~~~~l~~~~~~~~~~~i~-~gH~~~~e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 224 INMRLLAWRIPNAELHIID-DGHLFLITRAEAVAPIIMKFLAEER 267 (276)
T ss_pred HHHHHHHHhCCCCEEEEEc-CCCchhhccHHHHHHHHHHHHHHhh
Confidence 9999999999999999997 5999999999999999999998754
No 5
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=6.1e-32 Score=238.01 Aligned_cols=250 Identities=14% Similarity=0.143 Sum_probs=174.2
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR 153 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~ 153 (345)
...++++|.+++|...|++ |+|||+||++++. ..|..+++.|+++ ++|+++|+|| ||.|+.+..
T Consensus 9 ~~~~~~~g~~i~y~~~G~g-~~vvllHG~~~~~-~~w~~~~~~L~~~-~~via~D~~G-------------~G~S~~~~~ 72 (295)
T PRK03592 9 MRRVEVLGSRMAYIETGEG-DPIVFLHGNPTSS-YLWRNIIPHLAGL-GRCLAPDLIG-------------MGASDKPDI 72 (295)
T ss_pred ceEEEECCEEEEEEEeCCC-CEEEEECCCCCCH-HHHHHHHHHHhhC-CEEEEEcCCC-------------CCCCCCCCC
Confidence 5667889999999999976 5999999999995 9999999999998 6999999999 999987765
Q ss_pred CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch------hHHHHHHhH
Q psy4974 154 SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID------NVRVFEGMR 227 (345)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~------~~~~~~~~~ 227 (345)
.+ ++.++++++.+++++++.++++++||||||.+|+.+|.++|++|+++|++++....... ....+..+.
T Consensus 73 ~~----~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (295)
T PRK03592 73 DY----TFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALR 148 (295)
T ss_pred CC----CHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHh
Confidence 55 67888999999999999999999999999999999999999999999999984332110 001111111
Q ss_pred hccCCChh---hHHHHHHHcccCC--chhhhhHHHHH---------HHHHHHHHhhC-----------chhhhccCCCCC
Q psy4974 228 RLSNWSPM---ARSEVLKAYDNDV--NYITGIFNQYV---------DMVNLIFKSYG-----------RNVYQELLPYVD 282 (345)
Q Consensus 228 ~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~---------~~~~~~~~~~~-----------~~~~~~~l~~i~ 282 (345)
........ ........+.... .........+. .....++.... ..+....+.+++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 228 (295)
T PRK03592 149 SPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSD 228 (295)
T ss_pred CcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCC
Confidence 10000000 0000111111100 00000000000 00111111000 011234467889
Q ss_pred CCEEEEEeCCCCCCChHHHHHH-HhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 283 VPVLVFHSADDVMVSTQQVQSL-LNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 283 ~Pvl~i~G~~D~~v~~~~~~~~-~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+|+|+|+|++|.++++....++ .+..+++++.+++++||+++.|+|+++++.|.+|+++..
T Consensus 229 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 229 VPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred CCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhc
Confidence 9999999999999954444444 555678999999999999999999999999999998764
No 6
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.7e-31 Score=239.36 Aligned_cols=251 Identities=17% Similarity=0.190 Sum_probs=173.4
Q ss_pred eeeEEEcCc-eEEEEEcCCC-----CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCC
Q psy4974 74 EGFFSIKGC-DIRFIKYGSG-----AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQ 147 (345)
Q Consensus 74 ~~~~~~~g~-~l~~~~~g~~-----~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~ 147 (345)
..++..+|. +++|.+.|++ .|+|||+||++++. ..|..+++.|++. |+|+++|+|| ||.
T Consensus 63 ~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~-~~w~~~~~~L~~~-~~via~Dl~G-------------~G~ 127 (360)
T PLN02679 63 CKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASI-PHWRRNIGVLAKN-YTVYAIDLLG-------------FGA 127 (360)
T ss_pred CceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCH-HHHHHHHHHHhcC-CEEEEECCCC-------------CCC
Confidence 466777787 9999998865 36999999999994 9999999999875 9999999999 999
Q ss_pred CCCCCC-CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHH-hCCcccceeeEeccCCCCCchh--HHHH
Q psy4974 148 SLPKGR-SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSM-KYPHMVHKLVIWGTKSFLTIDN--VRVF 223 (345)
Q Consensus 148 s~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~-~~p~~v~~lvl~~~~~~~~~~~--~~~~ 223 (345)
|+.+.. .| +++++++++.++++.++.++++|+||||||.+++.++. .+|++|+++|++++........ ....
T Consensus 128 S~~~~~~~~----~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~ 203 (360)
T PLN02679 128 SDKPPGFSY----TMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWR 203 (360)
T ss_pred CCCCCCccc----cHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHH
Confidence 976542 34 67888999999999999999999999999999999887 4799999999999865321110 0000
Q ss_pred -H-------HhHhccC---C----------ChhhHHHHHHHcccCCchhhhhHHHH---------HHHHHHHHHhhCchh
Q psy4974 224 -E-------GMRRLSN---W----------SPMARSEVLKAYDNDVNYITGIFNQY---------VDMVNLIFKSYGRNV 273 (345)
Q Consensus 224 -~-------~~~~~~~---~----------~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 273 (345)
. ....... . .......+...+.............+ ...+..........+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (360)
T PLN02679 204 IKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPN 283 (360)
T ss_pred HhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCC
Confidence 0 0000000 0 00011111111111100000011100 111111111111122
Q ss_pred hhccCCCCCCCEEEEEeCCCCCCChHH-----HHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 274 YQELLPYVDVPVLVFHSADDVMVSTQQ-----VQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 274 ~~~~l~~i~~Pvl~i~G~~D~~v~~~~-----~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
....+.++++|+|+|+|++|.++|... .+.+.+.++++++++++++||++++|+|+++++.|.+||++..
T Consensus 284 ~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 284 PIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred HHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 345577899999999999999998753 3456677899999999999999999999999999999998653
No 7
>KOG4178|consensus
Probab=100.00 E-value=1.7e-31 Score=225.31 Aligned_cols=257 Identities=17% Similarity=0.164 Sum_probs=181.9
Q ss_pred CCcceeeeEEEcCceEEEEEcCCC-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCC
Q psy4974 69 QDVFTEGFFSIKGCDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQ 147 (345)
Q Consensus 69 ~~~~~~~~~~~~g~~l~~~~~g~~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~ 147 (345)
....+..+++.+|+.++|.+.|.+ .|.|+++||++.+ +.+|+.++..|+..||+|+++|+|| +|.
T Consensus 19 ~~~~~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~-wyswr~q~~~la~~~~rviA~DlrG-------------yG~ 84 (322)
T KOG4178|consen 19 LSAISHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPES-WYSWRHQIPGLASRGYRVIAPDLRG-------------YGF 84 (322)
T ss_pred hhhcceeeEEEccEEEEEEeecCCCCCEEEEEccCCcc-chhhhhhhhhhhhcceEEEecCCCC-------------CCC
Confidence 344568889999999999998854 4899999999999 6999999999999999999999999 999
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHH-HHHh
Q psy4974 148 SLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRV-FEGM 226 (345)
Q Consensus 148 s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~ 226 (345)
|+.|... +..++..++.++..+++.++.++++++||+||+.+|..+|..+|++|+++|+++.....+...... ....
T Consensus 85 Sd~P~~~--~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~ 162 (322)
T KOG4178|consen 85 SDAPPHI--SEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAI 162 (322)
T ss_pred CCCCCCc--ceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccc
Confidence 9987653 223788999999999999999999999999999999999999999999999999866522111100 0000
Q ss_pred Hh----------ccC----CChhhHHHHHH-HcccCC--------------chh-hhh------------HHHHHHHHHH
Q psy4974 227 RR----------LSN----WSPMARSEVLK-AYDNDV--------------NYI-TGI------------FNQYVDMVNL 264 (345)
Q Consensus 227 ~~----------~~~----~~~~~~~~~~~-~~~~~~--------------~~~-~~~------------~~~~~~~~~~ 264 (345)
.. ... ......+.+.. .+.... .+. ... +...+...+.
T Consensus 163 f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn 242 (322)
T KOG4178|consen 163 FGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRN 242 (322)
T ss_pred cCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHH
Confidence 00 000 00000000111 110000 000 000 0011111112
Q ss_pred HHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH-HHHHHHhhcCCc-EEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 265 IFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ-QVQSLLNQLKFC-QYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 265 ~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~-~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+.+.+. .....+.++.+|+++|+|+.|.+.+.. ....+.+.+++. +.++++++||+++.|+|+++++++.+||++.
T Consensus 243 ~~r~w~--a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 243 FRRNWE--AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred HhhCch--hccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 222211 224456788999999999999988755 555566666765 7889999999999999999999999999875
Q ss_pred c
Q psy4974 343 N 343 (345)
Q Consensus 343 ~ 343 (345)
.
T Consensus 321 ~ 321 (322)
T KOG4178|consen 321 S 321 (322)
T ss_pred c
Confidence 4
No 8
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=7.9e-31 Score=226.20 Aligned_cols=233 Identities=18% Similarity=0.212 Sum_probs=160.8
Q ss_pred eEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchH
Q psy4974 83 DIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIE 162 (345)
Q Consensus 83 ~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~ 162 (345)
.++|...|+++|+|||+||++++. ..|..+++.|.+. |+|+++|+|| ||.|+.+. .+ +++
T Consensus 3 ~~~y~~~G~g~~~ivllHG~~~~~-~~w~~~~~~L~~~-~~vi~~Dl~G-------------~G~S~~~~-~~----~~~ 62 (256)
T PRK10349 3 NIWWQTKGQGNVHLVLLHGWGLNA-EVWRCIDEELSSH-FTLHLVDLPG-------------FGRSRGFG-AL----SLA 62 (256)
T ss_pred ccchhhcCCCCCeEEEECCCCCCh-hHHHHHHHHHhcC-CEEEEecCCC-------------CCCCCCCC-CC----CHH
Confidence 377888888877899999999995 9999999999887 9999999999 99997542 23 555
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch------hHHHHHHhHh-ccCCChh
Q psy4974 163 EDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID------NVRVFEGMRR-LSNWSPM 235 (345)
Q Consensus 163 ~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~------~~~~~~~~~~-~~~~~~~ 235 (345)
++++++. .+..++++++||||||.+|+.+|.++|++|+++|++++.+..... .......+.. +......
T Consensus 63 ~~~~~l~----~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (256)
T PRK10349 63 DMAEAVL----QQAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQR 138 (256)
T ss_pred HHHHHHH----hcCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHH
Confidence 6565554 346689999999999999999999999999999999885432110 0011111110 0000000
Q ss_pred hHHHHHHH--cccCCchhhhhHHHHHH-----------HHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHH
Q psy4974 236 ARSEVLKA--YDNDVNYITGIFNQYVD-----------MVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQ 302 (345)
Q Consensus 236 ~~~~~~~~--~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~ 302 (345)
....+... +... ........+.. .+..........+....+.++++|+|+++|++|.++|.+.++
T Consensus 139 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~ 216 (256)
T PRK10349 139 TVERFLALQTMGTE--TARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVP 216 (256)
T ss_pred HHHHHHHHHHccCc--hHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHH
Confidence 01111000 1111 00100000000 011111111222345667889999999999999999999999
Q ss_pred HHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 303 SLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 303 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
.+.+.++++++++++++||++++|+|++|++.+.+|-.+
T Consensus 217 ~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 217 MLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred HHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999998543
No 9
>PLN02578 hydrolase
Probab=99.98 E-value=3.9e-30 Score=231.59 Aligned_cols=245 Identities=15% Similarity=0.223 Sum_probs=175.1
Q ss_pred eeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCC
Q psy4974 75 GFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRS 154 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~ 154 (345)
.++..+|..++|...|++ |+|||+||++++ ...|..+++.|++. |+|+++|+|| ||.|+.+...
T Consensus 69 ~~~~~~~~~i~Y~~~g~g-~~vvliHG~~~~-~~~w~~~~~~l~~~-~~v~~~D~~G-------------~G~S~~~~~~ 132 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGEG-LPIVLIHGFGAS-AFHWRYNIPELAKK-YKVYALDLLG-------------FGWSDKALIE 132 (354)
T ss_pred eEEEECCEEEEEEEcCCC-CeEEEECCCCCC-HHHHHHHHHHHhcC-CEEEEECCCC-------------CCCCCCcccc
Confidence 556778999999998876 589999999999 49999999999876 9999999999 9999877655
Q ss_pred CCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH----------HH--
Q psy4974 155 FVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV----------RV-- 222 (345)
Q Consensus 155 ~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~----------~~-- 222 (345)
| +...+++++.++++.+..++++++|||+||.+|+.+|.++|++|+++|++++......... ..
T Consensus 133 ~----~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (354)
T PLN02578 133 Y----DAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLT 208 (354)
T ss_pred c----CHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhh
Confidence 5 6677789999999999889999999999999999999999999999999987543221110 00
Q ss_pred ---HHHhHhc------------cCCChhhHHHHHHHcccCC---chhhhh----------HHHHHHHHHHHHHhhCchhh
Q psy4974 223 ---FEGMRRL------------SNWSPMARSEVLKAYDNDV---NYITGI----------FNQYVDMVNLIFKSYGRNVY 274 (345)
Q Consensus 223 ---~~~~~~~------------~~~~~~~~~~~~~~~~~~~---~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 274 (345)
....... ..............+.... .+.... ...+...+...+........
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (354)
T PLN02578 209 RFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTL 288 (354)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCH
Confidence 0000000 0000000011111111110 000000 00001111111111122334
Q ss_pred hccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 275 QELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 275 ~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.+.+.++++|+++|+|++|.++|.+.++.+.+.+++.+++++ ++||+++.|+|+++++.|.+|++
T Consensus 289 ~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 289 DSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred HHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 556788999999999999999999999999999999999999 59999999999999999999985
No 10
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.98 E-value=5.1e-30 Score=224.34 Aligned_cols=243 Identities=19% Similarity=0.236 Sum_probs=163.9
Q ss_pred CceEEEEEcCCCCceEEEEcCcCCCchhhHHH---HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCC
Q psy4974 81 GCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKK---QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVP 157 (345)
Q Consensus 81 g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~ 157 (345)
+..++|...|++ |+|||+||++++. ..|.. .+..|.+.||+|+++|+|| ||.|+.+.... .
T Consensus 19 ~~~~~y~~~g~~-~~ivllHG~~~~~-~~~~~~~~~~~~l~~~~~~vi~~D~~G-------------~G~S~~~~~~~-~ 82 (282)
T TIGR03343 19 NFRIHYNEAGNG-EAVIMLHGGGPGA-GGWSNYYRNIGPFVDAGYRVILKDSPG-------------FNKSDAVVMDE-Q 82 (282)
T ss_pred ceeEEEEecCCC-CeEEEECCCCCch-hhHHHHHHHHHHHHhCCCEEEEECCCC-------------CCCCCCCcCcc-c
Confidence 577999998866 5899999998874 66654 3455666689999999999 99997653221 1
Q ss_pred ccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc----hhHHHHHHhHhc-cCC
Q psy4974 158 FQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI----DNVRVFEGMRRL-SNW 232 (345)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~----~~~~~~~~~~~~-~~~ 232 (345)
.....++++.++++.++.++++++||||||.+++.+|.++|++++++|++++...... ............ ...
T Consensus 83 --~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (282)
T TIGR03343 83 --RGLVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEP 160 (282)
T ss_pred --ccchhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCC
Confidence 1124578899999999999999999999999999999999999999999997532111 000111111110 011
Q ss_pred ChhhHHHHHHHcccCCchhhh-----hHHHH---HHHHHHHHHh-----hCchhhhccCCCCCCCEEEEEeCCCCCCChH
Q psy4974 233 SPMARSEVLKAYDNDVNYITG-----IFNQY---VDMVNLIFKS-----YGRNVYQELLPYVDVPVLVFHSADDVMVSTQ 299 (345)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~-----~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~ 299 (345)
...........+......... .+... .......... ....+....+.++++|+|+++|++|.+++.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~ 240 (282)
T TIGR03343 161 SYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLD 240 (282)
T ss_pred CHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCch
Confidence 011111111111000000010 00000 0011111110 1112234457789999999999999999999
Q ss_pred HHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 300 QVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
.++++++.+|++++++++++||+++.|+|+++++.|.+||++
T Consensus 241 ~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 241 HGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred hHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999963
No 11
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.97 E-value=4.9e-30 Score=223.76 Aligned_cols=248 Identities=13% Similarity=0.160 Sum_probs=175.0
Q ss_pred eeeEEEcCceEEEEEcCCC-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
..++++++..++|.+.|+. .|+|||+||++++. ..|..+++.|++. |+|+++|+|| ||.|+.+.
T Consensus 8 ~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~-~~~~~~~~~l~~~-~~vi~~D~~G-------------~G~S~~~~ 72 (278)
T TIGR03056 8 SRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGAST-HSWRDLMPPLARS-FRVVAPDLPG-------------HGFTRAPF 72 (278)
T ss_pred cceeeECCEEEEEEecCCCCCCeEEEEcCCCCCH-HHHHHHHHHHhhC-cEEEeecCCC-------------CCCCCCcc
Confidence 5778899999999998863 47999999999995 9999999999875 9999999999 99997655
Q ss_pred C-CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH----HHHHHhH
Q psy4974 153 R-SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV----RVFEGMR 227 (345)
Q Consensus 153 ~-~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~----~~~~~~~ 227 (345)
. .+ +++.+++++.+++++++.++++|+||||||.+++.+|.++|++++++|++++......... .......
T Consensus 73 ~~~~----~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 148 (278)
T TIGR03056 73 RFRF----TLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVL 148 (278)
T ss_pred ccCC----CHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhh
Confidence 4 33 7888899999999999989999999999999999999999999999999987543211000 0000000
Q ss_pred hccCCChhh-------HHHHHHHcccCCchhhh-hHHHH---------HHHHHHHHHhhCchhhhccCCCCCCCEEEEEe
Q psy4974 228 RLSNWSPMA-------RSEVLKAYDNDVNYITG-IFNQY---------VDMVNLIFKSYGRNVYQELLPYVDVPVLVFHS 290 (345)
Q Consensus 228 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G 290 (345)
......... .......+......... ....+ ...................++++++|+++++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g 228 (278)
T TIGR03056 149 ACNPFTPPMMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAG 228 (278)
T ss_pred hhcccchHHHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEe
Confidence 000000000 00000000000000000 00000 00011111111111223456788999999999
Q ss_pred CCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 291 ADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 291 ~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
++|.++|.+..+.+.+.+++++++.++++||+++.++|+++++.|.+|++
T Consensus 229 ~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 229 EEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred CCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999984
No 12
>PRK06489 hypothetical protein; Provisional
Probab=99.97 E-value=6.4e-30 Score=230.81 Aligned_cols=254 Identities=17% Similarity=0.246 Sum_probs=169.3
Q ss_pred EEEcCceEEEEEcCCC--------CceEEEEcCcCCCchhhHH--HHHHhh-------CCCCeEEEEeCCCCchhhhccC
Q psy4974 77 FSIKGCDIRFIKYGSG--------AQVLFFTYGVLGEIRNSFK--KQLTAF-------DPKLFTSIFWDPPGNVVLYLLG 139 (345)
Q Consensus 77 ~~~~g~~l~~~~~g~~--------~p~vv~lHG~~~~~~~~~~--~~~~~L-------~~~G~~vi~~D~~G~~~~~~~g 139 (345)
...+|.+++|...|++ .|+|||+||++++. ..|. .+.+.| ..++|+|+++|+||
T Consensus 45 ~~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~-~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~G-------- 115 (360)
T PRK06489 45 ETLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSG-KSFLSPTFAGELFGPGQPLDASKYFIILPDGIG-------- 115 (360)
T ss_pred CCcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCch-hhhccchhHHHhcCCCCcccccCCEEEEeCCCC--------
Confidence 3568999999999874 47999999999984 6775 454444 13459999999999
Q ss_pred CccCCCCCCCCCCCCCC---CccchHHHHHHHHHH-HHHhCCccEE-EEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 140 KTCSGYGQSLPKGRSFV---PFQYIEEDVDIAYEL-LKLLGVCKVS-LFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 140 ~~~~~~G~s~~~~~~~~---~~~~~~~~~~~~~~~-l~~~~~~~i~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
||.|+.+...+. ...++++.++++.++ ++++++++++ |+||||||.+|+.+|.++|++|+++|++++.+.
T Consensus 116 -----hG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~ 190 (360)
T PRK06489 116 -----HGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPT 190 (360)
T ss_pred -----CCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcc
Confidence 999976543200 122677888888875 4889999985 899999999999999999999999999988643
Q ss_pred CCchhHH-H----HHHhHhccCC-----C--hhhHHHHHHHc--------------ccCCchhhhhHHHHHH--------
Q psy4974 215 LTIDNVR-V----FEGMRRLSNW-----S--PMARSEVLKAY--------------DNDVNYITGIFNQYVD-------- 260 (345)
Q Consensus 215 ~~~~~~~-~----~~~~~~~~~~-----~--~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~-------- 260 (345)
....... . .........+ . ..........+ ..........++....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (360)
T PRK06489 191 EMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADAN 270 (360)
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHH
Confidence 2111111 0 1111111100 0 00000000000 0000000111111110
Q ss_pred HHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHH--HHHHhhcCCcEEEEeCCC----CCcccccChHHHHHH
Q psy4974 261 MVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQV--QSLLNQLKFCQYYQFSSG----GHSCHIKHGQVFNEI 334 (345)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~--~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~ 334 (345)
.+...+......+....+.+|++|+|+|+|++|.++|.+.+ +.+++.+|++++++++++ ||.++ ++|+++++.
T Consensus 271 ~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~ 349 (360)
T PRK06489 271 DFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAY 349 (360)
T ss_pred HHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHH
Confidence 11111111122334566788999999999999999998865 788999999999999986 99997 899999999
Q ss_pred HHHHHHhhccC
Q psy4974 335 SRNFILEENKT 345 (345)
Q Consensus 335 i~~fl~~~~k~ 345 (345)
|.+||++..|.
T Consensus 350 i~~FL~~~~~~ 360 (360)
T PRK06489 350 LAEFLAQVPKR 360 (360)
T ss_pred HHHHHHhcccC
Confidence 99999988763
No 13
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=9.7e-30 Score=222.51 Aligned_cols=249 Identities=15% Similarity=0.149 Sum_probs=169.3
Q ss_pred cceeeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 71 VFTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 71 ~~~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
.++..+++++|.+++|...|++ |+|||+||++.+. ..|..+++.|.+. |+|+++|+|| ||.|+.
T Consensus 13 ~~~~~~~~~~~~~i~y~~~G~~-~~iv~lHG~~~~~-~~~~~~~~~l~~~-~~vi~~D~~G-------------~G~S~~ 76 (286)
T PRK03204 13 PFESRWFDSSRGRIHYIDEGTG-PPILLCHGNPTWS-FLYRDIIVALRDR-FRCVAPDYLG-------------FGLSER 76 (286)
T ss_pred cccceEEEcCCcEEEEEECCCC-CEEEEECCCCccH-HHHHHHHHHHhCC-cEEEEECCCC-------------CCCCCC
Confidence 3557888999999999999876 6999999999884 8999999999876 9999999999 999976
Q ss_pred CCC-CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch-hHHHHHHhHh
Q psy4974 151 KGR-SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID-NVRVFEGMRR 228 (345)
Q Consensus 151 ~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~ 228 (345)
+.. .+ ++++.++++.+++++++.++++++||||||.+++.+|..+|++|+++|++++....... ....+.....
T Consensus 77 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 152 (286)
T PRK03204 77 PSGFGY----QIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMS 152 (286)
T ss_pred CCcccc----CHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhc
Confidence 542 33 67888999999999999999999999999999999999999999999998875432211 1111111000
Q ss_pred ccCCChh-h-HHHH-HHHcccCC--chhhhhHHH---------HHHHHHHHHHhhC--c---hhhhccCC--CCCCCEEE
Q psy4974 229 LSNWSPM-A-RSEV-LKAYDNDV--NYITGIFNQ---------YVDMVNLIFKSYG--R---NVYQELLP--YVDVPVLV 287 (345)
Q Consensus 229 ~~~~~~~-~-~~~~-~~~~~~~~--~~~~~~~~~---------~~~~~~~~~~~~~--~---~~~~~~l~--~i~~Pvl~ 287 (345)
....... . .... ...+.... ......... ....+........ . ......+. .+++|+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ptli 232 (286)
T PRK03204 153 SPPVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLL 232 (286)
T ss_pred cccchhhhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEE
Confidence 0000000 0 0000 11110000 000000000 0001100000000 0 00011111 12899999
Q ss_pred EEeCCCCCCCh-HHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHH
Q psy4974 288 FHSADDVMVST-QQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 288 i~G~~D~~v~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 339 (345)
|+|++|.++++ ...+.+.+.+|+.++++++++||++++|+|+++++.|.+||
T Consensus 233 I~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 233 VWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred EecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 99999998854 46788999999999999999999999999999999999997
No 14
>PLN02965 Probable pheophorbidase
Probab=99.97 E-value=3.8e-30 Score=221.73 Aligned_cols=229 Identities=17% Similarity=0.162 Sum_probs=158.5
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC-CCCCccchHHHHHHHHHHHH
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR-SFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~-~~~~~~~~~~~~~~~~~~l~ 173 (345)
+|||+||++.+. ..|..+++.|.+.||+|+++|+|| ||.|+.+.. .+ +++++++++.++++
T Consensus 5 ~vvllHG~~~~~-~~w~~~~~~L~~~~~~via~Dl~G-------------~G~S~~~~~~~~----~~~~~a~dl~~~l~ 66 (255)
T PLN02965 5 HFVFVHGASHGA-WCWYKLATLLDAAGFKSTCVDLTG-------------AGISLTDSNTVS----SSDQYNRPLFALLS 66 (255)
T ss_pred EEEEECCCCCCc-CcHHHHHHHHhhCCceEEEecCCc-------------CCCCCCCccccC----CHHHHHHHHHHHHH
Confidence 699999999985 999999999977789999999999 999975432 33 67888999999999
Q ss_pred HhCC-ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch--hHHH---HHHhHhccCC-------Ch----hh
Q psy4974 174 LLGV-CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID--NVRV---FEGMRRLSNW-------SP----MA 236 (345)
Q Consensus 174 ~~~~-~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~---~~~~~~~~~~-------~~----~~ 236 (345)
.++. ++++++||||||.+++.+|.++|++|+++|++++....... .... .......... .. ..
T Consensus 67 ~l~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (255)
T PLN02965 67 DLPPDHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMM 146 (255)
T ss_pred hcCCCCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhc
Confidence 9987 49999999999999999999999999999999986321110 0110 0000000000 00 00
Q ss_pred HH-HHHHHcccCCchhhhhHHHHHHHHHH-HHHhh-CchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEE
Q psy4974 237 RS-EVLKAYDNDVNYITGIFNQYVDMVNL-IFKSY-GRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQY 313 (345)
Q Consensus 237 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~ 313 (345)
.. .....+.... .. .........+.. ..... ...+....+..+++|+++|+|++|.++|+...+.+.+.++++++
T Consensus 147 ~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~ 224 (255)
T PLN02965 147 KPEFVRHYYYNQS-PL-EDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQT 224 (255)
T ss_pred CHHHHHHHHhcCC-CH-HHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceE
Confidence 00 1101110110 00 000000000000 00000 00011224456899999999999999999999999999999999
Q ss_pred EEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 314 YQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 314 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
++++++||++++|+|+++++.|.+|++...
T Consensus 225 ~~i~~~GH~~~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 225 YVLEDSDHSAFFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred EEecCCCCchhhcCHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998654
No 15
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.97 E-value=2.5e-29 Score=230.00 Aligned_cols=252 Identities=11% Similarity=0.169 Sum_probs=170.6
Q ss_pred eeeeEEEcCceEEEEEcCCC----CceEEEEcCcCCCchhhHHH-HHHhhC---CCCeEEEEeCCCCchhhhccCCccCC
Q psy4974 73 TEGFFSIKGCDIRFIKYGSG----AQVLFFTYGVLGEIRNSFKK-QLTAFD---PKLFTSIFWDPPGNVVLYLLGKTCSG 144 (345)
Q Consensus 73 ~~~~~~~~g~~l~~~~~g~~----~p~vv~lHG~~~~~~~~~~~-~~~~L~---~~G~~vi~~D~~G~~~~~~~g~~~~~ 144 (345)
...+...++..++|...++. +|+|||+||++++. ..|.. +++.|. +.+|+|+++|+||
T Consensus 177 ~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~-~~W~~~~~~~L~~~~~~~yrVia~Dl~G------------- 242 (481)
T PLN03087 177 CTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSS-AFWTETLFPNFSDAAKSTYRLFAVDLLG------------- 242 (481)
T ss_pred eeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccH-HHHHHHHHHHHHHHhhCCCEEEEECCCC-------------
Confidence 35677788899999998753 36999999999995 88975 445555 3579999999999
Q ss_pred CCCCCCCCC-CCCCccchHHHHHHHH-HHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHH
Q psy4974 145 YGQSLPKGR-SFVPFQYIEEDVDIAY-ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRV 222 (345)
Q Consensus 145 ~G~s~~~~~-~~~~~~~~~~~~~~~~-~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 222 (345)
||.|+.+.. .| +++++++++. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++..........
T Consensus 243 ~G~S~~p~~~~y----tl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~ 318 (481)
T PLN03087 243 FGRSPKPADSLY----TLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQA 318 (481)
T ss_pred CCCCcCCCCCcC----CHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhH
Confidence 999976532 23 6788888884 78999999999999999999999999999999999999999865433221111
Q ss_pred ----HHHhHhccCCCh-----hhHHHH---HHHc----ccCCchhhh---h-----HHH-HHH------------HHHHH
Q psy4974 223 ----FEGMRRLSNWSP-----MARSEV---LKAY----DNDVNYITG---I-----FNQ-YVD------------MVNLI 265 (345)
Q Consensus 223 ----~~~~~~~~~~~~-----~~~~~~---~~~~----~~~~~~~~~---~-----~~~-~~~------------~~~~~ 265 (345)
.........+.. ...... .... ......... . ... ... .+...
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~ 398 (481)
T PLN03087 319 TQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNI 398 (481)
T ss_pred HHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHH
Confidence 111000011110 000000 0000 000000000 0 000 000 00000
Q ss_pred HHhh---CchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccc-cChHHHHHHHHHHHHh
Q psy4974 266 FKSY---GRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHI-KHGQVFNEISRNFILE 341 (345)
Q Consensus 266 ~~~~---~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 341 (345)
.... ........+.++++|+|+|+|++|.++|++..+.+++.+|++++++++++||++++ ++|+++++.|.+|.+.
T Consensus 399 i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 399 ICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 0000 00011122336899999999999999999999999999999999999999999886 9999999999999865
Q ss_pred h
Q psy4974 342 E 342 (345)
Q Consensus 342 ~ 342 (345)
.
T Consensus 479 ~ 479 (481)
T PLN03087 479 S 479 (481)
T ss_pred c
Confidence 3
No 16
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=4.6e-29 Score=224.51 Aligned_cols=244 Identities=13% Similarity=0.128 Sum_probs=167.6
Q ss_pred EEEcCceEEEEEcCC----CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 77 FSIKGCDIRFIKYGS----GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 77 ~~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
++.+|.+++|..+++ .+++|||+||++++....|..+++.|+++||+|+++|+|| ||.|+.+.
T Consensus 67 ~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G-------------~G~S~~~~ 133 (349)
T PLN02385 67 VNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPG-------------FGLSEGLH 133 (349)
T ss_pred EcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCC-------------CCCCCCCC
Confidence 345899999998763 3468999999988852457889999998899999999999 99997543
Q ss_pred CCCCCccchHHHHHHHHHHHHHhCCc------cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch-----h-H
Q psy4974 153 RSFVPFQYIEEDVDIAYELLKLLGVC------KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID-----N-V 220 (345)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~~~~~------~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-----~-~ 220 (345)
. ...+++++++++.++++.+..+ +++|+||||||.+|+.++.++|++++++|+++|....... . .
T Consensus 134 ~---~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~ 210 (349)
T PLN02385 134 G---YIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVL 210 (349)
T ss_pred C---CcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHH
Confidence 2 2236778899999888876532 7999999999999999999999999999999986542211 0 0
Q ss_pred HHHHHhHhc-cCC---Ch----------hhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEE
Q psy4974 221 RVFEGMRRL-SNW---SP----------MARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVL 286 (345)
Q Consensus 221 ~~~~~~~~~-~~~---~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 286 (345)
.....+... ..+ .. ........ +... ..... .........+.. ..+....+.++++|+|
T Consensus 211 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~--~~~~~~~~~l~~--~~~~~~~l~~i~~P~L 283 (349)
T PLN02385 211 QILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAE-YNVI--AYKDK--PRLRTAVELLRT--TQEIEMQLEEVSLPLL 283 (349)
T ss_pred HHHHHHHHHCCCceecCCCccccccccCHHHHHHhh-cCcc--eeCCC--cchHHHHHHHHH--HHHHHHhcccCCCCEE
Confidence 111111110 000 00 00000000 0000 00000 000011111111 1123455778999999
Q ss_pred EEEeCCCCCCChHHHHHHHhhc--CCcEEEEeCCCCCcccccChHH----HHHHHHHHHHhhc
Q psy4974 287 VFHSADDVMVSTQQVQSLLNQL--KFCQYYQFSSGGHSCHIKHGQV----FNEISRNFILEEN 343 (345)
Q Consensus 287 ~i~G~~D~~v~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~----~~~~i~~fl~~~~ 343 (345)
+|+|++|.++|.+.++.+.+.+ ++.++++++++||+++.++|++ +.+.|.+||+++.
T Consensus 284 ii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 284 ILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred EEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 9999999999999999999887 4689999999999999999886 8888999998764
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.97 E-value=5.6e-29 Score=214.48 Aligned_cols=226 Identities=15% Similarity=0.183 Sum_probs=159.3
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
++|+|||+||++++. ..|..++..|++. |+|+++|+|| ||.|..+. .+ +++++++++.++
T Consensus 15 ~~~~iv~lhG~~~~~-~~~~~~~~~l~~~-~~vi~~D~~G-------------~G~s~~~~-~~----~~~~~~~d~~~~ 74 (255)
T PRK10673 15 NNSPIVLVHGLFGSL-DNLGVLARDLVND-HDIIQVDMRN-------------HGLSPRDP-VM----NYPAMAQDLLDT 74 (255)
T ss_pred CCCCEEEECCCCCch-hHHHHHHHHHhhC-CeEEEECCCC-------------CCCCCCCC-CC----CHHHHHHHHHHH
Confidence 347999999999995 8999999999876 9999999999 99997543 34 678889999999
Q ss_pred HHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc--hhHHHHHHhHhccCCChh----hHHHHHHHcc
Q psy4974 172 LKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI--DNVRVFEGMRRLSNWSPM----ARSEVLKAYD 245 (345)
Q Consensus 172 l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 245 (345)
++.++.++++++||||||.+|+.+|.++|++|+++|++++.+.... .....+..+......... ....+...+.
T Consensus 75 l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (255)
T PRK10673 75 LDALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLN 154 (255)
T ss_pred HHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999976443211 111111111111000000 0000111110
Q ss_pred cCCchhh--------hhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeC
Q psy4974 246 NDVNYIT--------GIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFS 317 (345)
Q Consensus 246 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~ 317 (345)
.. .... ..+..........+.. ......++.+++|+|+|+|++|..++.+..+.+.+.++++++.+++
T Consensus 155 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~ 230 (255)
T PRK10673 155 EE-GVIQFLLKSFVDGEWRFNVPVLWDQYPH---IVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIA 230 (255)
T ss_pred CH-HHHHHHHhcCCcceeEeeHHHHHHhHHH---HhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeC
Confidence 00 0000 0000000000011111 1112346678999999999999999999999999999999999999
Q ss_pred CCCCcccccChHHHHHHHHHHHHh
Q psy4974 318 SGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 318 ~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
++||++++++|+++++.|.+||.+
T Consensus 231 ~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 231 GAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCCeeeccCHHHHHHHHHHHHhc
Confidence 999999999999999999999975
No 18
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.97 E-value=5.6e-29 Score=212.89 Aligned_cols=237 Identities=18% Similarity=0.253 Sum_probs=166.3
Q ss_pred EEEEEcCC--CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccch
Q psy4974 84 IRFIKYGS--GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYI 161 (345)
Q Consensus 84 l~~~~~g~--~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~ 161 (345)
++|...|+ ++|+||++||++++. ..|..+++.|.. ||+|+++|+|| ||.|+.+...+ ++
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~-~~~~~~~~~l~~-~~~v~~~d~~G-------------~G~s~~~~~~~----~~ 62 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDL-RMWDPVLPALTP-DFRVLRYDKRG-------------HGLSDAPEGPY----SI 62 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccch-hhHHHHHHHhhc-ccEEEEecCCC-------------CCCCCCCCCCC----CH
Confidence 56776765 457899999999884 999999999975 69999999999 99997655444 67
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCC-Chhh-HHH
Q psy4974 162 EEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNW-SPMA-RSE 239 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~ 239 (345)
++.++++.++++.++.++++++|||+||.+++.+|.++|++++++|++++......... ........... .... ...
T Consensus 63 ~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 141 (251)
T TIGR02427 63 EDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPES-WNARIAAVRAEGLAALADAV 141 (251)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhh-HHHHHhhhhhccHHHHHHHH
Confidence 88899999999999989999999999999999999999999999999987654322111 11110000000 0000 001
Q ss_pred HHHHcccCC----chhhhhHHHH-----HHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC
Q psy4974 240 VLKAYDNDV----NYITGIFNQY-----VDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF 310 (345)
Q Consensus 240 ~~~~~~~~~----~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~ 310 (345)
+..++.... ......+... ...+..........+....+.++++|+++++|++|.++|.+..+.+.+.+++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~ 221 (251)
T TIGR02427 142 LERWFTPGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPG 221 (251)
T ss_pred HHHHcccccccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCC
Confidence 111111110 0000000000 0011111112222233455678899999999999999999999999999999
Q ss_pred cEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 311 CQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 311 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.++++++++||++++++|+++.+.+.+||+
T Consensus 222 ~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 222 ARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred ceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 999999999999999999999999999984
No 19
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.97 E-value=7.4e-29 Score=213.38 Aligned_cols=237 Identities=21% Similarity=0.267 Sum_probs=165.1
Q ss_pred EEEEEcCC---CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccc
Q psy4974 84 IRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQY 160 (345)
Q Consensus 84 l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~ 160 (345)
++|...|+ +.|+||++||++++. ..|..+++.|.+. |+|+++|+|| ||.|..+.. ...+
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~-~~~~~~~~~l~~~-~~vi~~D~~G-------------~G~S~~~~~---~~~~ 62 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSG-SYWAPQLDVLTQR-FHVVTYDHRG-------------TGRSPGELP---PGYS 62 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcch-hHHHHHHHHHHhc-cEEEEEcCCC-------------CCCCCCCCc---ccCC
Confidence 35666663 457999999999995 9999999888765 9999999999 999975432 2226
Q ss_pred hHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh-HhccCCC-hhhHH
Q psy4974 161 IEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM-RRLSNWS-PMARS 238 (345)
Q Consensus 161 ~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~ 238 (345)
+++.++++.++++.++.++++++||||||.+|+.+|.++|++|+++|++++...........+... ....... .....
T Consensus 63 ~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (257)
T TIGR03611 63 IAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVH 142 (257)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhh
Confidence 788899999999999999999999999999999999999999999999998655432221111100 0000000 00000
Q ss_pred HHHH-HcccCCchhhhh----HHH---------HHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHH
Q psy4974 239 EVLK-AYDNDVNYITGI----FNQ---------YVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSL 304 (345)
Q Consensus 239 ~~~~-~~~~~~~~~~~~----~~~---------~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~ 304 (345)
.... .+... +.... ... ...............+....+.++++|+++++|++|.++|.+.++.+
T Consensus 143 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 220 (257)
T TIGR03611 143 AQALFLYPAD--WISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRL 220 (257)
T ss_pred hhhhhhcccc--HhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHH
Confidence 0000 00000 00000 000 00001111111112233456778899999999999999999999999
Q ss_pred HhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 305 LNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 305 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.+.+++.+++.++++||++++++|+++++.|.+||+
T Consensus 221 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 221 AAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred HHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999996
No 20
>PRK10749 lysophospholipase L2; Provisional
Probab=99.97 E-value=8.8e-29 Score=220.78 Aligned_cols=250 Identities=12% Similarity=0.143 Sum_probs=170.0
Q ss_pred eeeEEEcCceEEEEEcCC--CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS--GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~--~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
..++..+|.+++|..++. ++++||++||++++. ..|..++..|.+.||+|+++|+|| ||.|+.+
T Consensus 33 ~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~-~~y~~~~~~l~~~g~~v~~~D~~G-------------~G~S~~~ 98 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESY-VKYAELAYDLFHLGYDVLIIDHRG-------------QGRSGRL 98 (330)
T ss_pred eEEEcCCCCEEEEEEccCCCCCcEEEEECCccchH-HHHHHHHHHHHHCCCeEEEEcCCC-------------CCCCCCC
Confidence 556667999999999863 446899999998884 889999988988899999999999 9999754
Q ss_pred CCCC--CCccchHHHHHHHHHHHHHh----CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH-----
Q psy4974 152 GRSF--VPFQYIEEDVDIAYELLKLL----GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV----- 220 (345)
Q Consensus 152 ~~~~--~~~~~~~~~~~~~~~~l~~~----~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~----- 220 (345)
.... ....+++++++++.++++.+ +..+++++||||||.+++.+|.++|+.++++|+++|.........
T Consensus 99 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~ 178 (330)
T PRK10749 99 LDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMAR 178 (330)
T ss_pred CCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHH
Confidence 2210 01236788899999988876 567999999999999999999999999999999998654221110
Q ss_pred HHHHHhHhc-----------cCCC------------hhhHHHHHHHcccCCch-h-hhhHHHHHHHHHHHHHhhCchhhh
Q psy4974 221 RVFEGMRRL-----------SNWS------------PMARSEVLKAYDNDVNY-I-TGIFNQYVDMVNLIFKSYGRNVYQ 275 (345)
Q Consensus 221 ~~~~~~~~~-----------~~~~------------~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ 275 (345)
......... ..+. ........+.+...+.. . ..... +....... .....
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~ 252 (330)
T PRK10749 179 RILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYH-WVRESILA-----GEQVL 252 (330)
T ss_pred HHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHH-HHHHHHHH-----HHHHH
Confidence 001111000 0000 00000111111111000 0 00011 11110000 01123
Q ss_pred ccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc-------CCcEEEEeCCCCCcccccCh---HHHHHHHHHHHHhhc
Q psy4974 276 ELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL-------KFCQYYQFSSGGHSCHIKHG---QVFNEISRNFILEEN 343 (345)
Q Consensus 276 ~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~-------~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~~ 343 (345)
..+.++++|+|+|+|++|.+++++.++.+++.+ +++++++++++||.++.|.+ +.+.+.|.+||++++
T Consensus 253 ~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~~ 330 (330)
T PRK10749 253 AGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRHN 330 (330)
T ss_pred hhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhcC
Confidence 456788999999999999999999888888765 34589999999999998765 678899999998763
No 21
>PHA02857 monoglyceride lipase; Provisional
Probab=99.97 E-value=2.4e-28 Score=213.07 Aligned_cols=247 Identities=13% Similarity=0.166 Sum_probs=167.5
Q ss_pred eeEEEcCceEEEEEcCCC---CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 75 GFFSIKGCDIRFIKYGSG---AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~~---~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
.++..+|..++|..+.++ ++.|+++||+++++ ..|..+++.|++.||+|+++|+|| ||.|+..
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~-~~~~~~~~~l~~~g~~via~D~~G-------------~G~S~~~ 69 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHS-GRYEELAENISSLGILVFSHDHIG-------------HGRSNGE 69 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCcccc-chHHHHHHHHHhCCCEEEEccCCC-------------CCCCCCc
Confidence 455669999999876542 34666779999985 999999999999899999999999 9999653
Q ss_pred CCCCCCccchHHHHHHHHHHHHHh----CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh-HHH-HHH
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLL----GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN-VRV-FEG 225 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~----~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~-~~~ 225 (345)
. + ....+.+.++++.+.++.+ ...+++++||||||.+|+.+|.++|++++++|+++|........ ... ...
T Consensus 70 ~--~-~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~ 146 (276)
T PHA02857 70 K--M-MIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAK 146 (276)
T ss_pred c--C-CcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHH
Confidence 2 2 4456667777777776654 34589999999999999999999999999999999865422110 000 000
Q ss_pred hHhc--cC-----CChhh----HHHHHHHcccCCchh-hhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCC
Q psy4974 226 MRRL--SN-----WSPMA----RSEVLKAYDNDVNYI-TGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADD 293 (345)
Q Consensus 226 ~~~~--~~-----~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D 293 (345)
.... .. +.... ...... +..+.... ......+....... .......+.++++|+|+++|++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~i~~Pvliv~G~~D 220 (276)
T PHA02857 147 LMGIFYPNKIVGKLCPESVSRDMDEVYK-YQYDPLVNHEKIKAGFASQVLKA-----TNKVRKIIPKIKTPILILQGTNN 220 (276)
T ss_pred HHHHhCCCCccCCCCHhhccCCHHHHHH-HhcCCCccCCCccHHHHHHHHHH-----HHHHHHhcccCCCCEEEEecCCC
Confidence 0000 00 00000 000000 00000000 00011111111111 11224567789999999999999
Q ss_pred CCCChHHHHHHHhhc-CCcEEEEeCCCCCcccccCh---HHHHHHHHHHHHhhcc
Q psy4974 294 VMVSTQQVQSLLNQL-KFCQYYQFSSGGHSCHIKHG---QVFNEISRNFILEENK 344 (345)
Q Consensus 294 ~~v~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~~k 344 (345)
.++|++.++.+.+.+ +++++.+++++||.++.|.+ +++.+.+.+||+.+.|
T Consensus 221 ~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~~~ 275 (276)
T PHA02857 221 EISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNRVK 275 (276)
T ss_pred CcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHhcc
Confidence 999999999998887 46899999999999998865 5788999999988654
No 22
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=6.7e-29 Score=222.81 Aligned_cols=253 Identities=17% Similarity=0.208 Sum_probs=168.0
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchh-----------hHHHHHH---hhCCCCeEEEEeCCCCchhhhccC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRN-----------SFKKQLT---AFDPKLFTSIFWDPPGNVVLYLLG 139 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~-----------~~~~~~~---~L~~~G~~vi~~D~~G~~~~~~~g 139 (345)
..+...+|..++|...|++.+++||+||++++... .|..++. .|...+|+|+++|+||
T Consensus 38 ~~~~~~~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G-------- 109 (343)
T PRK08775 38 MRHAGLEDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIG-------- 109 (343)
T ss_pred ecCCCCCCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCC--------
Confidence 44556689999999999633467888777776422 6888886 5743359999999999
Q ss_pred CccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccE-EEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch
Q psy4974 140 KTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKV-SLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID 218 (345)
Q Consensus 140 ~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 218 (345)
||.|. ...+ ++.++++++.++++.++++++ +++||||||++|+.+|.++|++|+++|++++.......
T Consensus 110 -----~g~s~--~~~~----~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~ 178 (343)
T PRK08775 110 -----ADGSL--DVPI----DTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPY 178 (343)
T ss_pred -----CCCCC--CCCC----CHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHH
Confidence 99874 2234 567889999999999999775 79999999999999999999999999999986543221
Q ss_pred hHHHHH---HhHhccCC---C-h--hh-----------HHHHHHHcccCCch----hhhhHHHHHHHHH-H---------
Q psy4974 219 NVRVFE---GMRRLSNW---S-P--MA-----------RSEVLKAYDNDVNY----ITGIFNQYVDMVN-L--------- 264 (345)
Q Consensus 219 ~~~~~~---~~~~~~~~---~-~--~~-----------~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~--------- 264 (345)
...... ........ . . .. ...+...+...... .......+..... .
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 258 (343)
T PRK08775 179 AAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNA 258 (343)
T ss_pred HHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhH
Confidence 111111 00000000 0 0 00 00011111111000 0000111111000 0
Q ss_pred HHHhhCchhh-hccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc-CCcEEEEeCC-CCCcccccChHHHHHHHHHHHHh
Q psy4974 265 IFKSYGRNVY-QELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL-KFCQYYQFSS-GGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 265 ~~~~~~~~~~-~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~-~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
........+. ...+.++++|+|+|+|++|.++|.+..+.+.+.+ ++++++++++ +||.+++|+|++|++.|.+||++
T Consensus 259 ~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 259 YLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRS 338 (343)
T ss_pred HHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHh
Confidence 0000000001 2236789999999999999999999889998888 6899999985 99999999999999999999987
Q ss_pred hccC
Q psy4974 342 ENKT 345 (345)
Q Consensus 342 ~~k~ 345 (345)
...|
T Consensus 339 ~~~~ 342 (343)
T PRK08775 339 TGET 342 (343)
T ss_pred cccc
Confidence 6543
No 23
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.97 E-value=2.7e-28 Score=213.20 Aligned_cols=251 Identities=20% Similarity=0.224 Sum_probs=167.3
Q ss_pred eeeEEEcCceEEEEEcCC-C-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS-G-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~-~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
+.++++++..+.|...+. + +++|||+||+++++...|..+...|.+.||+|+++|+|| +|.|..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G-------------~G~s~~~ 70 (288)
T TIGR01250 4 EGIITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLG-------------CGYSDQP 70 (288)
T ss_pred cceecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCC-------------CCCCCCC
Confidence 346677888888887663 3 479999999877754566767777776689999999999 9999755
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccC
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSN 231 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 231 (345)
.... ...+++++++++.++++.++.++++++||||||.+++.+|..+|++++++|++++.................+..
T Consensus 71 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 149 (288)
T TIGR01250 71 DDSD-ELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPP 149 (288)
T ss_pred Cccc-ccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcCh
Confidence 3221 123678889999999999999999999999999999999999999999999998765432221111000000000
Q ss_pred --------------CC-hhhHHHHHHHcc----cCCchhhhhHHHHHHHH-HHHHH------------hhCchhhhccCC
Q psy4974 232 --------------WS-PMARSEVLKAYD----NDVNYITGIFNQYVDMV-NLIFK------------SYGRNVYQELLP 279 (345)
Q Consensus 232 --------------~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~------------~~~~~~~~~~l~ 279 (345)
+. ..........+. ... ............. ...+. .....+....+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 228 (288)
T TIGR01250 150 EVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTR-KWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLS 228 (288)
T ss_pred hHHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccc-cchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhh
Confidence 00 000000000000 000 0000000000000 00000 001112334567
Q ss_pred CCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 280 YVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 280 ~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
++++|+++++|++|.+ ++...+.+.+.+++.++++++++||+.+.++|+++++.|.+||+
T Consensus 229 ~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 229 EIKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred ccCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 8899999999999985 56788889988899999999999999999999999999999984
No 24
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.97 E-value=6.9e-28 Score=216.54 Aligned_cols=246 Identities=15% Similarity=0.145 Sum_probs=168.3
Q ss_pred EEEcCceEEEEEcCCC-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCC
Q psy4974 77 FSIKGCDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSF 155 (345)
Q Consensus 77 ~~~~g~~l~~~~~g~~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~ 155 (345)
+..+|.+++|.+.|++ .|+|||+||++++. ..|+.+++.|++. |+|+++|+|| ||.|+.+....
T Consensus 110 ~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~-~~w~~~~~~L~~~-~~Via~DlpG-------------~G~S~~p~~~~ 174 (383)
T PLN03084 110 ASSDLFRWFCVESGSNNNPPVLLIHGFPSQA-YSYRKVLPVLSKN-YHAIAFDWLG-------------FGFSDKPQPGY 174 (383)
T ss_pred EcCCceEEEEEecCCCCCCeEEEECCCCCCH-HHHHHHHHHHhcC-CEEEEECCCC-------------CCCCCCCcccc
Confidence 4568899999999863 47999999999995 9999999999875 9999999999 99998764321
Q ss_pred CCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch-hHHHHHHhHh-----c
Q psy4974 156 VPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID-NVRVFEGMRR-----L 229 (345)
Q Consensus 156 ~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~-----~ 229 (345)
....+++++++++.++++++++++++|+|||+||.+++.+|.++|++|+++|+++++...... .......+.. .
T Consensus 175 ~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~ 254 (383)
T PLN03084 175 GFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEI 254 (383)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhh
Confidence 011278889999999999999999999999999999999999999999999999987542110 0111110000 0
Q ss_pred cCCChhh--------------HHHHHHHcccCCchhhhh-HHHHHHHHHHHHHhhCc---hhhhcc--CCCCCCCEEEEE
Q psy4974 230 SNWSPMA--------------RSEVLKAYDNDVNYITGI-FNQYVDMVNLIFKSYGR---NVYQEL--LPYVDVPVLVFH 289 (345)
Q Consensus 230 ~~~~~~~--------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~--l~~i~~Pvl~i~ 289 (345)
....... .......+... +.... .......+...+..... ...... ...+++|+++|+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~ 332 (383)
T PLN03084 255 FSQDPLRASDKALTSCGPYAMKEDDAMVYRRP--YLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCW 332 (383)
T ss_pred hhcchHHHHhhhhcccCccCCCHHHHHHHhcc--ccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEe
Confidence 0000000 00000000000 00000 00000111111110000 001111 135799999999
Q ss_pred eCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 290 SADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 290 G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
|+.|.+++.+..+.+++. ++.++++++++||+++.|+|+++++.|.+||.
T Consensus 333 G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 333 GLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred eCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 999999999888888887 58899999999999999999999999999986
No 25
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=3.7e-29 Score=210.56 Aligned_cols=220 Identities=25% Similarity=0.354 Sum_probs=158.5
Q ss_pred EEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh
Q psy4974 96 LFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLL 175 (345)
Q Consensus 96 vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~ 175 (345)
|||+||++++. ..|..+++.|+ +||+|+++|+|| +|.|+.+.. + ...++++.++++.++++++
T Consensus 1 vv~~hG~~~~~-~~~~~~~~~l~-~~~~v~~~d~~G-------------~G~s~~~~~-~-~~~~~~~~~~~l~~~l~~~ 63 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESWDPLAEALA-RGYRVIAFDLPG-------------HGRSDPPPD-Y-SPYSIEDYAEDLAELLDAL 63 (228)
T ss_dssp EEEE-STTTTG-GGGHHHHHHHH-TTSEEEEEECTT-------------STTSSSHSS-G-SGGSHHHHHHHHHHHHHHT
T ss_pred eEEECCCCCCH-HHHHHHHHHHh-CCCEEEEEecCC-------------ccccccccc-c-CCcchhhhhhhhhhccccc
Confidence 79999999995 99999999996 679999999999 999976653 2 3447889999999999999
Q ss_pred CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh--HHHHHHhHhccCCChh-----hHHHHHHHcccCC
Q psy4974 176 GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN--VRVFEGMRRLSNWSPM-----ARSEVLKAYDNDV 248 (345)
Q Consensus 176 ~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 248 (345)
+.++++++|||+||.+++.++.++|++|+++|++++........ ......+..+...... ....+...+...
T Consensus 64 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 142 (228)
T PF12697_consen 64 GIKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGD- 142 (228)
T ss_dssp TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH-
T ss_pred ccccccccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccc-
Confidence 99999999999999999999999999999999999987643222 1111111111100000 011111111111
Q ss_pred chhhhhHHHHHHHHHHHHHh-hCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccC
Q psy4974 249 NYITGIFNQYVDMVNLIFKS-YGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKH 327 (345)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 327 (345)
............+...+.. ....+....+..+++|+++++|++|.+++.+..+.+.+.++++++++++++||++++++
T Consensus 143 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 221 (228)
T PF12697_consen 143 -EPEDLIRSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLEQ 221 (228)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHHS
T ss_pred -cccccccccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHHC
Confidence 1222222222222222222 12233345567779999999999999999999999999999999999999999999999
Q ss_pred hHHHHHH
Q psy4974 328 GQVFNEI 334 (345)
Q Consensus 328 ~~~~~~~ 334 (345)
|++++++
T Consensus 222 p~~~~~a 228 (228)
T PF12697_consen 222 PDEVAEA 228 (228)
T ss_dssp HHHHHHH
T ss_pred HHHHhcC
Confidence 9999874
No 26
>PRK07581 hypothetical protein; Validated
Probab=99.96 E-value=4.1e-28 Score=217.70 Aligned_cols=255 Identities=13% Similarity=0.206 Sum_probs=163.6
Q ss_pred eeeEEEcCceEEEEEcCC----CCceEEEEcCcCCCchhhHHHHH---HhhCCCCeEEEEeCCCCchhhhccCCccCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS----GAQVLFFTYGVLGEIRNSFKKQL---TAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYG 146 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~~~~~~~---~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G 146 (345)
+.-.+++|.+++|...|+ ++|+||++||++++. ..|..++ +.|...+|+|+++|+|| ||
T Consensus 18 ~~g~~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~-~~~~~~~~~~~~l~~~~~~vi~~D~~G-------------~G 83 (339)
T PRK07581 18 QSGATLPDARLAYKTYGTLNAAKDNAILYPTWYSGTH-QDNEWLIGPGRALDPEKYFIIIPNMFG-------------NG 83 (339)
T ss_pred cCCCCcCCceEEEEecCccCCCCCCEEEEeCCCCCCc-ccchhhccCCCccCcCceEEEEecCCC-------------CC
Confidence 344567899999999986 234566666666563 5665554 46765569999999999 99
Q ss_pred CCCCCCC---CCCCccc-----hHHHHHHHH-HHHHHhCCccE-EEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCC
Q psy4974 147 QSLPKGR---SFVPFQY-----IEEDVDIAY-ELLKLLGVCKV-SLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLT 216 (345)
Q Consensus 147 ~s~~~~~---~~~~~~~-----~~~~~~~~~-~~l~~~~~~~i-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 216 (345)
.|+.+.. .| +.+. +.+.+.... .++++++++++ +|+||||||.+|+.+|.++|++|+++|++++.....
T Consensus 84 ~S~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~ 162 (339)
T PRK07581 84 LSSSPSNTPAPF-NAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTT 162 (339)
T ss_pred CCCCCCCCCCCC-CCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCC
Confidence 9975542 23 3322 333333322 36678999995 799999999999999999999999999998766533
Q ss_pred chhHHHHHHh----HhccCCC--------hhhHHH----HH------HHcccCC--ch----hhhhHHHHH---------
Q psy4974 217 IDNVRVFEGM----RRLSNWS--------PMARSE----VL------KAYDNDV--NY----ITGIFNQYV--------- 259 (345)
Q Consensus 217 ~~~~~~~~~~----~~~~~~~--------~~~~~~----~~------~~~~~~~--~~----~~~~~~~~~--------- 259 (345)
.......... ..-..|. ...... .. ..+.... .. .........
T Consensus 163 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (339)
T PRK07581 163 PHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDP 242 (339)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCc
Confidence 2211111111 0000110 000000 00 0000000 00 000000000
Q ss_pred HHHHHHHHhh------C----chhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCC-CCCcccccCh
Q psy4974 260 DMVNLIFKSY------G----RNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSS-GGHSCHIKHG 328 (345)
Q Consensus 260 ~~~~~~~~~~------~----~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~ 328 (345)
......+... . ..+....+.++++|+|+|+|++|.++|+..++.+.+.+++++++++++ +||+.+++++
T Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~ 322 (339)
T PRK07581 243 NNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQN 322 (339)
T ss_pred ccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCc
Confidence 0011111000 0 113456678899999999999999999999999999999999999998 8999999999
Q ss_pred HHHHHHHHHHHHhhc
Q psy4974 329 QVFNEISRNFILEEN 343 (345)
Q Consensus 329 ~~~~~~i~~fl~~~~ 343 (345)
+++++.|.+||++..
T Consensus 323 ~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 323 PADIAFIDAALKELL 337 (339)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998753
No 27
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.96 E-value=4.9e-28 Score=206.41 Aligned_cols=224 Identities=18% Similarity=0.244 Sum_probs=151.6
Q ss_pred CCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 90 GSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 90 g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
|+++|+|||+||++++. ..|..+++.|.+. |+|+++|+|| +|.|.... .+ ++++.++++.
T Consensus 1 g~g~~~iv~~HG~~~~~-~~~~~~~~~l~~~-~~vi~~d~~G-------------~G~s~~~~-~~----~~~~~~~~~~ 60 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNA-EVFRCLDEELSAH-FTLHLVDLPG-------------HGRSRGFG-PL----SLADAAEAIA 60 (245)
T ss_pred CCCCceEEEEcCCCCch-hhHHHHHHhhccC-eEEEEecCCc-------------CccCCCCC-Cc----CHHHHHHHHH
Confidence 34557999999999995 9999999999875 9999999999 99986432 22 5666666655
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh-------HHHHHHhHh-ccC-CChhhHHHH
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN-------VRVFEGMRR-LSN-WSPMARSEV 240 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-------~~~~~~~~~-~~~-~~~~~~~~~ 240 (345)
+.+ .++++++||||||.+++.+|.++|++++++|++++.+...... ......... ... .........
T Consensus 61 ~~~----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (245)
T TIGR01738 61 AQA----PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFL 136 (245)
T ss_pred HhC----CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHH
Confidence 443 3699999999999999999999999999999998765321110 001111000 000 000000000
Q ss_pred H-HHcccCCchhhhhHHHH-----------HHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc
Q psy4974 241 L-KAYDNDVNYITGIFNQY-----------VDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL 308 (345)
Q Consensus 241 ~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~ 308 (345)
. ..+... ......... ...+...+......+....+.++++|+++++|++|.++|.+..+.+.+.+
T Consensus 137 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~ 214 (245)
T TIGR01738 137 ALQTLGTP--TARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA 214 (245)
T ss_pred HHHHhcCC--ccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC
Confidence 0 001110 000000000 01111112222223334567789999999999999999999999999999
Q ss_pred CCcEEEEeCCCCCcccccChHHHHHHHHHHH
Q psy4974 309 KFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 309 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 339 (345)
+++++++++++||++++|+|+++++.|.+|+
T Consensus 215 ~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 215 PHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred CCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 9999999999999999999999999999986
No 28
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=1.6e-27 Score=213.06 Aligned_cols=247 Identities=14% Similarity=0.126 Sum_probs=162.7
Q ss_pred eeEEEcCceEEEEEcCC-----CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC
Q psy4974 75 GFFSIKGCDIRFIKYGS-----GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL 149 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~-----~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~ 149 (345)
.+...+|.+++|..+++ .+++|||+||++.+....|..++..|+++||+|+++|+|| ||.|+
T Consensus 36 ~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rG-------------hG~S~ 102 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEG-------------HGRSE 102 (330)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCC-------------CCCCC
Confidence 33445999999987642 2357999999986632467777888998899999999999 99996
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHHhCC------ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh----
Q psy4974 150 PKGRSFVPFQYIEEDVDIAYELLKLLGV------CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN---- 219 (345)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~---- 219 (345)
.... ...+++..++|+.++++.+.. .+++|+||||||.+++.++.++|++|+++|+++|........
T Consensus 103 ~~~~---~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 179 (330)
T PLN02298 103 GLRA---YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPW 179 (330)
T ss_pred Cccc---cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCch
Confidence 4332 123567778888888887643 379999999999999999999999999999999865432110
Q ss_pred --HHHHHHhHhcc-CC--Ch-------hhHHH-HHHHcccCC-chhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCE
Q psy4974 220 --VRVFEGMRRLS-NW--SP-------MARSE-VLKAYDNDV-NYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPV 285 (345)
Q Consensus 220 --~~~~~~~~~~~-~~--~~-------~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 285 (345)
......+.... .. .. ..... ......... .+.......+...+.... ......+.++++|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~Pv 254 (330)
T PLN02298 180 PIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVT-----DYLGKKLKDVSIPF 254 (330)
T ss_pred HHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHH-----HHHHHhhhhcCCCE
Confidence 00001111000 00 00 00000 000000000 000000000111111110 11245577889999
Q ss_pred EEEEeCCCCCCChHHHHHHHhhcC--CcEEEEeCCCCCcccccChH----HHHHHHHHHHHhh
Q psy4974 286 LVFHSADDVMVSTQQVQSLLNQLK--FCQYYQFSSGGHSCHIKHGQ----VFNEISRNFILEE 342 (345)
Q Consensus 286 l~i~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~~~ 342 (345)
|+++|++|.++|.+.++.+++.++ +.+++++++++|.++.++|+ ++.+.+.+||.+.
T Consensus 255 Lii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 255 IVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred EEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988774 78999999999999998875 4677888998765
No 29
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.96 E-value=4.7e-28 Score=218.04 Aligned_cols=252 Identities=17% Similarity=0.259 Sum_probs=167.7
Q ss_pred eEEEcCceEEEEEcCC----CCceEEEEcCcCCCchh----------hHHHHH---HhhCCCCeEEEEeCCCCchhhhcc
Q psy4974 76 FFSIKGCDIRFIKYGS----GAQVLFFTYGVLGEIRN----------SFKKQL---TAFDPKLFTSIFWDPPGNVVLYLL 138 (345)
Q Consensus 76 ~~~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~----------~~~~~~---~~L~~~G~~vi~~D~~G~~~~~~~ 138 (345)
-..++|.+|+|..+|+ +.++|||+||++++... .|..++ ..|..++|+|+++|+||
T Consensus 10 g~~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G------- 82 (351)
T TIGR01392 10 GGVLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLG------- 82 (351)
T ss_pred CCccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCC-------
Confidence 3456899999999984 34799999999997422 477775 25655679999999999
Q ss_pred CCccCCC-CCCCCC-----CC-CCC---CccchHHHHHHHHHHHHHhCCcc-EEEEEeChhHHHHHHHHHhCCcccceee
Q psy4974 139 GKTCSGY-GQSLPK-----GR-SFV---PFQYIEEDVDIAYELLKLLGVCK-VSLFGWCDGGHLSFVFSMKYPHMVHKLV 207 (345)
Q Consensus 139 g~~~~~~-G~s~~~-----~~-~~~---~~~~~~~~~~~~~~~l~~~~~~~-i~lvGhS~Gg~ia~~~a~~~p~~v~~lv 207 (345)
+ +.++.+ .. .+. ...+++++++++.++++++++++ ++++||||||.+++.+|.++|++|+++|
T Consensus 83 ------~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lv 156 (351)
T TIGR01392 83 ------GCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIV 156 (351)
T ss_pred ------CCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEE
Confidence 6 223221 11 010 12368899999999999999998 9999999999999999999999999999
Q ss_pred EeccCCCCCchhHHHHH----HhHhccCCC---------h--hh-------------HHHHHHHcccCCchh--h-----
Q psy4974 208 IWGTKSFLTIDNVRVFE----GMRRLSNWS---------P--MA-------------RSEVLKAYDNDVNYI--T----- 252 (345)
Q Consensus 208 l~~~~~~~~~~~~~~~~----~~~~~~~~~---------~--~~-------------~~~~~~~~~~~~~~~--~----- 252 (345)
++++............. .+.....+. + .. ...+...+....... .
T Consensus 157 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 236 (351)
T TIGR01392 157 VLATSARHSAWCIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFD 236 (351)
T ss_pred EEccCCcCCHHHHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccC
Confidence 99987654432211111 111000000 0 00 001111121110000 0
Q ss_pred --hhHHHHH--------H--------HHHHHHHhhCc----hhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC
Q psy4974 253 --GIFNQYV--------D--------MVNLIFKSYGR----NVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF 310 (345)
Q Consensus 253 --~~~~~~~--------~--------~~~~~~~~~~~----~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~ 310 (345)
...+.+. . .....+..... .+..+.+.+|++|+|+|+|++|.++|+..++.+++.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~ 316 (351)
T TIGR01392 237 TRFQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPA 316 (351)
T ss_pred ccchHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhh
Confidence 0001111 0 00111111110 123567889999999999999999999999999999998
Q ss_pred cEEE-----EeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 311 CQYY-----QFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 311 ~~~~-----~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.++. +++++||.+++++|+++++.|.+||+
T Consensus 317 ~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 317 AGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred cCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 7665 56789999999999999999999984
No 30
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.96 E-value=1.4e-27 Score=204.17 Aligned_cols=222 Identities=15% Similarity=0.166 Sum_probs=148.9
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
.|+|||+||++++. ..|..+++.|+ +|+|+++|+|| ||.|+.+.. .+++++++++.+++
T Consensus 2 ~p~vvllHG~~~~~-~~w~~~~~~l~--~~~vi~~D~~G-------------~G~S~~~~~-----~~~~~~~~~l~~~l 60 (242)
T PRK11126 2 LPWLVFLHGLLGSG-QDWQPVGEALP--DYPRLYIDLPG-------------HGGSAAISV-----DGFADVSRLLSQTL 60 (242)
T ss_pred CCEEEEECCCCCCh-HHHHHHHHHcC--CCCEEEecCCC-------------CCCCCCccc-----cCHHHHHHHHHHHH
Confidence 46899999999995 99999999884 49999999999 999976532 27888999999999
Q ss_pred HHhCCccEEEEEeChhHHHHHHHHHhCCcc-cceeeEeccCCCCCchhHHHHHHhH---hccCCC-hhhHHHHHHHcccC
Q psy4974 173 KLLGVCKVSLFGWCDGGHLSFVFSMKYPHM-VHKLVIWGTKSFLTIDNVRVFEGMR---RLSNWS-PMARSEVLKAYDND 247 (345)
Q Consensus 173 ~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~ 247 (345)
+.++.++++++||||||.+|+.+|.++|+. |++++++++................ ...... ......+..++...
T Consensus 61 ~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (242)
T PRK11126 61 QSYNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQP 140 (242)
T ss_pred HHcCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcc
Confidence 999999999999999999999999998654 9999999876543322111110000 000000 00111111111100
Q ss_pred --CchhhhhHHHHH--------HHHHHHHHhh---CchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEE
Q psy4974 248 --VNYITGIFNQYV--------DMVNLIFKSY---GRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYY 314 (345)
Q Consensus 248 --~~~~~~~~~~~~--------~~~~~~~~~~---~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~ 314 (345)
............ .....++... ...+....+.++++|+++++|++|..+. .+.+. .+++++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-~~~~~~ 214 (242)
T PRK11126 141 VFASLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-LALPLH 214 (242)
T ss_pred hhhccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-hcCeEE
Confidence 000000011000 0111111111 1223455678899999999999998553 22333 378999
Q ss_pred EeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 315 QFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 315 ~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+++++||+++.|+|+++++.|.+||+.
T Consensus 215 ~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 215 VIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred EeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 999999999999999999999999964
No 31
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=1.3e-27 Score=216.78 Aligned_cols=254 Identities=15% Similarity=0.297 Sum_probs=169.7
Q ss_pred eeEEEcCceEEEEEcCC----CCceEEEEcCcCCCchhh-------------HHHHHH---hhCCCCeEEEEeCCCCchh
Q psy4974 75 GFFSIKGCDIRFIKYGS----GAQVLFFTYGVLGEIRNS-------------FKKQLT---AFDPKLFTSIFWDPPGNVV 134 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~~-------------~~~~~~---~L~~~G~~vi~~D~~G~~~ 134 (345)
.-..++|.+++|..+|+ +.|+|||+||++++. .. |..++. .|..++|+|+++|++|
T Consensus 26 ~g~~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~-~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G--- 101 (379)
T PRK00175 26 SGAVLPPVELAYETYGTLNADRSNAVLICHALTGDH-HVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLG--- 101 (379)
T ss_pred CCCCcCCceEEEEeccccCCCCCCEEEEeCCcCCch-hhcccccccCCCCcchhhccCCCCccCccceEEEeccCCC---
Confidence 34566889999999985 247999999999995 53 666652 4434469999999998
Q ss_pred hhccCCccCCC-CCCCCCC-------C----CCCCccchHHHHHHHHHHHHHhCCcc-EEEEEeChhHHHHHHHHHhCCc
Q psy4974 135 LYLLGKTCSGY-GQSLPKG-------R----SFVPFQYIEEDVDIAYELLKLLGVCK-VSLFGWCDGGHLSFVFSMKYPH 201 (345)
Q Consensus 135 ~~~~g~~~~~~-G~s~~~~-------~----~~~~~~~~~~~~~~~~~~l~~~~~~~-i~lvGhS~Gg~ia~~~a~~~p~ 201 (345)
+ |.|+.+. . .+ ...+++++++++.++++++++++ ++++||||||.+++.+|.++|+
T Consensus 102 ----------~~~~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~ 170 (379)
T PRK00175 102 ----------GCKGSTGPSSINPDTGKPYGSDF-PVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPD 170 (379)
T ss_pred ----------CCCCCCCCCCCCCCCCCcccCCC-CcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChH
Confidence 4 4443221 0 11 12378899999999999999999 5899999999999999999999
Q ss_pred ccceeeEeccCCCCCchhHHHH----HHhHhccCCC----------hh----h-----------HHHHHHHcccCCc--h
Q psy4974 202 MVHKLVIWGTKSFLTIDNVRVF----EGMRRLSNWS----------PM----A-----------RSEVLKAYDNDVN--Y 250 (345)
Q Consensus 202 ~v~~lvl~~~~~~~~~~~~~~~----~~~~~~~~~~----------~~----~-----------~~~~~~~~~~~~~--~ 250 (345)
+|+++|++++............ ..+.....|. +. . ...+...+..... .
T Consensus 171 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~ 250 (379)
T PRK00175 171 RVRSALVIASSARLSAQNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGE 250 (379)
T ss_pred hhhEEEEECCCcccCHHHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccc
Confidence 9999999998765433211111 1111100000 00 0 0011111211100 0
Q ss_pred h------hhhHHHHHH----------------HHHHHHHhhCc-----hhhhccCCCCCCCEEEEEeCCCCCCChHHHHH
Q psy4974 251 I------TGIFNQYVD----------------MVNLIFKSYGR-----NVYQELLPYVDVPVLVFHSADDVMVSTQQVQS 303 (345)
Q Consensus 251 ~------~~~~~~~~~----------------~~~~~~~~~~~-----~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~ 303 (345)
. ....+.+.. .....+..... .+....+.+|++|+|+|+|++|.++|++.++.
T Consensus 251 ~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~ 330 (379)
T PRK00175 251 LPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSRE 330 (379)
T ss_pred cccCCCccchHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHH
Confidence 0 000111110 00111111110 12456778999999999999999999999999
Q ss_pred HHhhcCCc----EEEEeC-CCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 304 LLNQLKFC----QYYQFS-SGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 304 ~~~~~~~~----~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+++.++++ ++++++ ++||+.++|+|+++++.|.+||.+..
T Consensus 331 la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 331 IVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred HHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 99999876 777775 89999999999999999999998754
No 32
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.96 E-value=2.1e-27 Score=205.90 Aligned_cols=242 Identities=14% Similarity=0.116 Sum_probs=163.5
Q ss_pred EcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCc
Q psy4974 79 IKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPF 158 (345)
Q Consensus 79 ~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~ 158 (345)
-+|-+++|...+..+|+|||+||++++. ..|..+...|.+.||+|+++|+|| ||.|..... ..
T Consensus 4 ~~~~~~~~~~~~~~~p~vvliHG~~~~~-~~w~~~~~~L~~~g~~vi~~dl~g-------------~G~s~~~~~---~~ 66 (273)
T PLN02211 4 ENGEEVTDMKPNRQPPHFVLIHGISGGS-WCWYKIRCLMENSGYKVTCIDLKS-------------AGIDQSDAD---SV 66 (273)
T ss_pred ccccccccccccCCCCeEEEECCCCCCc-CcHHHHHHHHHhCCCEEEEecccC-------------CCCCCCCcc---cC
Confidence 3788888888655667999999999995 899999999988889999999999 998753322 12
Q ss_pred cchHHHHHHHHHHHHHhC-CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch-h-HHHHHHhHhcc---C-
Q psy4974 159 QYIEEDVDIAYELLKLLG-VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID-N-VRVFEGMRRLS---N- 231 (345)
Q Consensus 159 ~~~~~~~~~~~~~l~~~~-~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~-~~~~~~~~~~~---~- 231 (345)
.+++++++++.++++.++ .++++|+||||||.++..++..+|++|+++|++++....... . ........... .
T Consensus 67 ~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 146 (273)
T PLN02211 67 TTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDV 146 (273)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccc
Confidence 378888999999999885 579999999999999999999999999999999875331111 0 00000000000 0
Q ss_pred ----CC---------hhhHHH-HHHHcccCCchhhhhHHHHHHHHHH--HHHhhCchhhhccCCCC-CCCEEEEEeCCCC
Q psy4974 232 ----WS---------PMARSE-VLKAYDNDVNYITGIFNQYVDMVNL--IFKSYGRNVYQELLPYV-DVPVLVFHSADDV 294 (345)
Q Consensus 232 ----~~---------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~i-~~Pvl~i~G~~D~ 294 (345)
+. ...... ....+... .......+...... ...............++ ++|+++|.|++|.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~ 223 (273)
T PLN02211 147 YELGFGLGPDQPPTSAIIKKEFRRKILYQM---SPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDH 223 (273)
T ss_pred eeeeeccCCCCCCceeeeCHHHHHHHHhcC---CCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCC
Confidence 00 000000 00010000 00000000000000 00001111111223344 7899999999999
Q ss_pred CCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 295 MVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 295 ~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
.+|++..+.+.+.+++.+++.++ +||.+++++|+++++.|.++...
T Consensus 224 ~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 224 VVKPEQQEAMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred CCCHHHHHHHHHhCCccEEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 99999999999999988999996 89999999999999999988754
No 33
>KOG4409|consensus
Probab=99.96 E-value=3.7e-27 Score=199.56 Aligned_cols=251 Identities=19% Similarity=0.269 Sum_probs=164.8
Q ss_pred eeeEEE-cCceEEEEEcC---CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC
Q psy4974 74 EGFFSI-KGCDIRFIKYG---SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL 149 (345)
Q Consensus 74 ~~~~~~-~g~~l~~~~~g---~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~ 149 (345)
..++.+ ++..++..... ..++++|+|||+|++. ..|..-.+.|++. ++|+++|++| +|.|+
T Consensus 67 ~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~-g~f~~Nf~~La~~-~~vyaiDllG-------------~G~SS 131 (365)
T KOG4409|consen 67 KKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGL-GLFFRNFDDLAKI-RNVYAIDLLG-------------FGRSS 131 (365)
T ss_pred eeeeecCCCceeEEEeecccccCCCcEEEEeccchhH-HHHHHhhhhhhhc-CceEEecccC-------------CCCCC
Confidence 344444 44445444332 3457999999999995 9999999999996 9999999999 99999
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch-h--------H
Q psy4974 150 PKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID-N--------V 220 (345)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~--------~ 220 (345)
.|.-..........+++.++++....++++.+|+|||+||++|..||.+||++|+.|||++|....... . .
T Consensus 132 RP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~ 211 (365)
T KOG4409|consen 132 RPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPP 211 (365)
T ss_pred CCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCCh
Confidence 886544122234567899999999999999999999999999999999999999999999998765422 1 1
Q ss_pred HHH-------------HHhHhccCCChhhH----HHHHHHcccCCchhhhhHHHHH-----------HHHHHHHHh--hC
Q psy4974 221 RVF-------------EGMRRLSNWSPMAR----SEVLKAYDNDVNYITGIFNQYV-----------DMVNLIFKS--YG 270 (345)
Q Consensus 221 ~~~-------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~--~~ 270 (345)
.++ ..++....+.+... ......+... ...+..-+++ ..+..++.. +.
T Consensus 212 ~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~--~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~A 289 (365)
T KOG4409|consen 212 EWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSL--IEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWA 289 (365)
T ss_pred HHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhcccc--chhHHHHHHHHHhcCCCCcHHHHHHHHHhccchh
Confidence 111 11111112221111 1111111110 0011101110 011111111 11
Q ss_pred chhhhccCCCC--CCCEEEEEeCCCCCCChHHHHHHHhhc--CCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 271 RNVYQELLPYV--DVPVLVFHSADDVMVSTQQVQSLLNQL--KFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 271 ~~~~~~~l~~i--~~Pvl~i~G~~D~~v~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
...+.+.+..+ +||+++|+|++|- ++.....++.+.+ ..++.++++++||+..+++|+.|++.+.++++..
T Consensus 290 r~Pm~~r~~~l~~~~pv~fiyG~~dW-mD~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 290 RRPMIQRLRELKKDVPVTFIYGDRDW-MDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred hhhHHHHHHhhccCCCEEEEecCccc-ccchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 12233334444 4999999999995 4555666666543 3589999999999999999999999999998753
No 34
>KOG1454|consensus
Probab=99.95 E-value=1.1e-27 Score=210.61 Aligned_cols=235 Identities=19% Similarity=0.279 Sum_probs=161.0
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
.+|+||++||++++. ..|+.++..|.+. |+.|+++|++| +|.++..+.. ...+..+.++.+..
T Consensus 57 ~~~pvlllHGF~~~~-~~w~~~~~~L~~~~~~~v~aiDl~G-------------~g~~s~~~~~--~~y~~~~~v~~i~~ 120 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASS-FSWRRVVPLLSKAKGLRVLAIDLPG-------------HGYSSPLPRG--PLYTLRELVELIRR 120 (326)
T ss_pred CCCcEEEeccccCCc-ccHhhhccccccccceEEEEEecCC-------------CCcCCCCCCC--CceehhHHHHHHHH
Confidence 457999999999985 9999999999877 69999999999 9955433322 22367788888999
Q ss_pred HHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceee---EeccCCCCCchhHHHHH-HhH----hccCCChhhHHHHHH
Q psy4974 171 LLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLV---IWGTKSFLTIDNVRVFE-GMR----RLSNWSPMARSEVLK 242 (345)
Q Consensus 171 ~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lv---l~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~ 242 (345)
+......++++++|||+||.+|+.+|+.+|+.|++++ ++++............. .+. ....+.+........
T Consensus 121 ~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 200 (326)
T KOG1454|consen 121 FVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVR 200 (326)
T ss_pred HHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchh
Confidence 9998888899999999999999999999999999999 66665554333322111 111 011111110000000
Q ss_pred HcccC----C----chhhhhHHHHHH-------------HHHHHHHhhCc--hhhhccCCCCC-CCEEEEEeCCCCCCCh
Q psy4974 243 AYDND----V----NYITGIFNQYVD-------------MVNLIFKSYGR--NVYQELLPYVD-VPVLVFHSADDVMVST 298 (345)
Q Consensus 243 ~~~~~----~----~~~~~~~~~~~~-------------~~~~~~~~~~~--~~~~~~l~~i~-~Pvl~i~G~~D~~v~~ 298 (345)
.+... . ......+..... ....++..... ......+.++. ||+|+++|++|+++|.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~ 280 (326)
T KOG1454|consen 201 LVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPL 280 (326)
T ss_pred heeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCH
Confidence 00000 0 000000111110 00111111111 22233455666 9999999999999999
Q ss_pred HHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 299 QQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+.+..+.+.+|++++++++++||.+++|.|+++++.|..|+.+.
T Consensus 281 ~~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 281 ELAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred HHHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999865
No 35
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.95 E-value=1.8e-26 Score=209.80 Aligned_cols=244 Identities=17% Similarity=0.241 Sum_probs=168.0
Q ss_pred eeEEEcCceEEEEEcCCC-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC
Q psy4974 75 GFFSIKGCDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR 153 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~ 153 (345)
..+..++..++|...+++ .|+|||+||++++. ..|..+...|.+. |+|+++|+|| ||.|.....
T Consensus 112 ~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g-------------~G~s~~~~~ 176 (371)
T PRK14875 112 RKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDL-NNWLFNHAALAAG-RPVIALDLPG-------------HGASSKAVG 176 (371)
T ss_pred CcceEcCcEEEEecccCCCCCeEEEECCCCCcc-chHHHHHHHHhcC-CEEEEEcCCC-------------CCCCCCCCC
Confidence 445678888999888753 47999999999995 9999999999876 9999999999 999965443
Q ss_pred CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCC
Q psy4974 154 SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWS 233 (345)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (345)
.. +++++++++.++++.++.++++++|||+||.+|+.+|..+|+++.++|++++..............+.... ..
T Consensus 177 ~~----~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~-~~ 251 (371)
T PRK14875 177 AG----SLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAE-SR 251 (371)
T ss_pred CC----CHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhccc-ch
Confidence 33 67888999999999999889999999999999999999999999999999886543322111111111000 00
Q ss_pred hhhHHHHHHHcccCCchhhhhHHHH---------HHHHHHHHHh-----hCchhhhccCCCCCCCEEEEEeCCCCCCChH
Q psy4974 234 PMARSEVLKAYDNDVNYITGIFNQY---------VDMVNLIFKS-----YGRNVYQELLPYVDVPVLVFHSADDVMVSTQ 299 (345)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~-----~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~ 299 (345)
......+...+.............. ...+...... ....+....+.++++|+++++|++|.++|.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~ 331 (371)
T PRK14875 252 RELKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAA 331 (371)
T ss_pred hHHHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHH
Confidence 0011111111111000000000000 0001111000 0112334456778999999999999999987
Q ss_pred HHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 300 QVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
..+.+. ++.++.+++++||++++++|+++++.|.+||++
T Consensus 332 ~~~~l~---~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 332 HAQGLP---DGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred HHhhcc---CCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 665443 468999999999999999999999999999975
No 36
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.95 E-value=2.1e-26 Score=196.62 Aligned_cols=227 Identities=19% Similarity=0.262 Sum_probs=153.8
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH-HHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI-AYELL 172 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~-~~~~l 172 (345)
|+||++||++++. ..|..+++.|+ +||+|+++|+|| +|.|+.+... ...++++.+++ +..++
T Consensus 2 ~~vv~~hG~~~~~-~~~~~~~~~L~-~~~~v~~~d~~g-------------~G~s~~~~~~--~~~~~~~~~~~~~~~~~ 64 (251)
T TIGR03695 2 PVLVFLHGFLGSG-ADWQALIELLG-PHFRCLAIDLPG-------------HGSSQSPDEI--ERYDFEEAAQDILATLL 64 (251)
T ss_pred CEEEEEcCCCCch-hhHHHHHHHhc-ccCeEEEEcCCC-------------CCCCCCCCcc--ChhhHHHHHHHHHHHHH
Confidence 6899999999995 99999999998 679999999999 9999765432 33467788888 77788
Q ss_pred HHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh------HhccCCChhhHHHHHHHc--
Q psy4974 173 KLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM------RRLSNWSPMARSEVLKAY-- 244 (345)
Q Consensus 173 ~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-- 244 (345)
+.++.++++++|||+||.+|+.+|.++|+.|++++++++............... ..+... ........++
T Consensus 65 ~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 142 (251)
T TIGR03695 65 DQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQE--GLEAFLDDWYQQ 142 (251)
T ss_pred HHcCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhc--CccHHHHHHhcC
Confidence 888888999999999999999999999999999999998654332211110000 000000 0000000000
Q ss_pred ---ccCCchhhhhHHHH--------HHHHHHHHH---hhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC
Q psy4974 245 ---DNDVNYITGIFNQY--------VDMVNLIFK---SYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF 310 (345)
Q Consensus 245 ---~~~~~~~~~~~~~~--------~~~~~~~~~---~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~ 310 (345)
.............. ...+...+. ..........+.++++|+++++|++|..++ +..+.+.+..++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~ 221 (251)
T TIGR03695 143 PLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPN 221 (251)
T ss_pred ceeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCC
Confidence 00000000000000 000111111 011112234467789999999999998764 567778888899
Q ss_pred cEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 311 CQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 311 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.++++++++||++++++|+++.+.|.+||+
T Consensus 222 ~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 222 LTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred CcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 999999999999999999999999999984
No 37
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=1.4e-25 Score=204.38 Aligned_cols=245 Identities=18% Similarity=0.207 Sum_probs=155.0
Q ss_pred eEEEEEcC--CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccc
Q psy4974 83 DIRFIKYG--SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQY 160 (345)
Q Consensus 83 ~l~~~~~g--~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~ 160 (345)
.+++.... ...|+|||+||++++. ..|...+..|++. |+|+++|+|| ||.|+.+...+.+...
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~-~~~~~~~~~L~~~-~~vi~~D~rG-------------~G~S~~~~~~~~~~~~ 157 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQ-GFFFRNFDALASR-FRVIAIDQLG-------------WGGSSRPDFTCKSTEE 157 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcch-hHHHHHHHHHHhC-CEEEEECCCC-------------CCCCCCCCcccccHHH
Confidence 44444332 2347999999999884 8888888889876 9999999999 9999765432201111
Q ss_pred h-HHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH--HHHH--------HhH--
Q psy4974 161 I-EEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV--RVFE--------GMR-- 227 (345)
Q Consensus 161 ~-~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~--------~~~-- 227 (345)
. +..++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|+++|......... .... .+.
T Consensus 158 ~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (402)
T PLN02894 158 TEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNH 237 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHH
Confidence 2 23466777888888989999999999999999999999999999999998654322111 0000 000
Q ss_pred -------------hccCCChhhH-HHHHHHcccCC---ch---hhhhHHHHHHH----------HHHHHHh---hCchhh
Q psy4974 228 -------------RLSNWSPMAR-SEVLKAYDNDV---NY---ITGIFNQYVDM----------VNLIFKS---YGRNVY 274 (345)
Q Consensus 228 -------------~~~~~~~~~~-~~~~~~~~~~~---~~---~~~~~~~~~~~----------~~~~~~~---~~~~~~ 274 (345)
....+.+... ......+.... .. .......+... ....... ....+.
T Consensus 238 ~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (402)
T PLN02894 238 LWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPL 317 (402)
T ss_pred HhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchH
Confidence 0000000000 00001111000 00 00001011000 0001100 112344
Q ss_pred hccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC-CcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 275 QELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK-FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 275 ~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
...+.++++|+++|+|++|.+.+ .....+.+..+ .+++++++++||+++.|+|++|++.|.+|++...
T Consensus 318 ~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~ 386 (402)
T PLN02894 318 LESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYL 386 (402)
T ss_pred hhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhc
Confidence 55678899999999999998776 45555555553 5889999999999999999999999999987654
No 38
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.95 E-value=2.9e-25 Score=200.77 Aligned_cols=239 Identities=13% Similarity=0.117 Sum_probs=159.9
Q ss_pred cCceEEEEEcCC----CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCC
Q psy4974 80 KGCDIRFIKYGS----GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSF 155 (345)
Q Consensus 80 ~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~ 155 (345)
++..+++..+.+ .+++||++||++++. ..|..+++.|+++||+|+++|+|| ||.|+....
T Consensus 119 ~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~-~~~~~~a~~L~~~Gy~V~~~D~rG-------------hG~S~~~~~-- 182 (395)
T PLN02652 119 RRNALFCRSWAPAAGEMRGILIIIHGLNEHS-GRYLHFAKQLTSCGFGVYAMDWIG-------------HGGSDGLHG-- 182 (395)
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCchHHH-HHHHHHHHHHHHCCCEEEEeCCCC-------------CCCCCCCCC--
Confidence 667888877643 346899999999885 889999999998899999999999 999975432
Q ss_pred CCccchHHHHHHHHHHHHHhCC----ccEEEEEeChhHHHHHHHHHhCC---cccceeeEeccCCCCCchhH--HHHHHh
Q psy4974 156 VPFQYIEEDVDIAYELLKLLGV----CKVSLFGWCDGGHLSFVFSMKYP---HMVHKLVIWGTKSFLTIDNV--RVFEGM 226 (345)
Q Consensus 156 ~~~~~~~~~~~~~~~~l~~~~~----~~i~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~--~~~~~~ 226 (345)
...+++..++|+.++++.+.. .+++++||||||.+++.++. +| ++++++|+.+|......... .....+
T Consensus 183 -~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l 260 (395)
T PLN02652 183 -YVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPI 260 (395)
T ss_pred -CCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHH
Confidence 122566677788877777642 37999999999999998775 55 47999999998754332111 011000
Q ss_pred -Hhc-cCC--Ch---------hhHHHHHHHcccCCchhh-hhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCC
Q psy4974 227 -RRL-SNW--SP---------MARSEVLKAYDNDVNYIT-GIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSAD 292 (345)
Q Consensus 227 -~~~-~~~--~~---------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~ 292 (345)
... ..+ .. .........+.... ... .........+.... ......+.++++|+|+++|++
T Consensus 261 ~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~-~~~g~i~~~~~~~~~~~~-----~~l~~~L~~I~vPvLIi~G~~ 334 (395)
T PLN02652 261 FSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPL-VYTGPIRVRTGHEILRIS-----SYLTRNFKSVTVPFMVLHGTA 334 (395)
T ss_pred HHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCC-cccCCchHHHHHHHHHHH-----HHHHhhcccCCCCEEEEEeCC
Confidence 000 000 00 00011111111110 000 00000111111110 112456778999999999999
Q ss_pred CCCCChHHHHHHHhhcC--CcEEEEeCCCCCccccc-ChHHHHHHHHHHHHhh
Q psy4974 293 DVMVSTQQVQSLLNQLK--FCQYYQFSSGGHSCHIK-HGQVFNEISRNFILEE 342 (345)
Q Consensus 293 D~~v~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~ 342 (345)
|.++|++.++.+++.++ +.+++++++++|.++.+ +++++.+.+.+||+++
T Consensus 335 D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 335 DRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKR 387 (395)
T ss_pred CCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHH
Confidence 99999999999988864 47899999999998776 7999999999999865
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.94 E-value=3.6e-25 Score=195.69 Aligned_cols=247 Identities=14% Similarity=0.183 Sum_probs=156.7
Q ss_pred eeeEEE-cCceEEEEEcCC-CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 74 EGFFSI-KGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 74 ~~~~~~-~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
..++.. +|.+++|...|+ +.++|||+||++++. ..+ .+...+...+|+|+++|+|| ||.|+.+
T Consensus 6 ~~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~-~~~-~~~~~~~~~~~~vi~~D~~G-------------~G~S~~~ 70 (306)
T TIGR01249 6 SGYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSG-TDP-GCRRFFDPETYRIVLFDQRG-------------CGKSTPH 70 (306)
T ss_pred CCeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCC-CCH-HHHhccCccCCEEEEECCCC-------------CCCCCCC
Confidence 455665 689999999885 236899999988774 333 34455555679999999999 9999755
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH-----------
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV----------- 220 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~----------- 220 (345)
... ...+..+.++++..+++.++.++++++||||||.+++.++.++|++|+++|++++....+....
T Consensus 71 ~~~--~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 148 (306)
T TIGR01249 71 ACL--EENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIY 148 (306)
T ss_pred CCc--ccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhC
Confidence 322 1225678899999999999999999999999999999999999999999999987654221110
Q ss_pred -HHHHHhH-hccCCC--hhhHHHHHHHcccCC-c---hhhhhHHHHH------------------------HHHHHHHHh
Q psy4974 221 -RVFEGMR-RLSNWS--PMARSEVLKAYDNDV-N---YITGIFNQYV------------------------DMVNLIFKS 268 (345)
Q Consensus 221 -~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~-~---~~~~~~~~~~------------------------~~~~~~~~~ 268 (345)
..+.... ...... ......+...+.... . .....+..+. ..+...+..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (306)
T TIGR01249 149 PDAWQRFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFV 228 (306)
T ss_pred HHHHHHHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHH
Confidence 0000000 000000 011111111111110 0 0000111111 000000000
Q ss_pred ----hC-chhhhccCCCC-CCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 269 ----YG-RNVYQELLPYV-DVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 269 ----~~-~~~~~~~l~~i-~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.. .......+.++ ++|+|+|+|++|.++|.+.++.+++.+++.++++++++||.++.+ +..+.|.+|+.
T Consensus 229 ~~~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~i~~~~~ 303 (306)
T TIGR01249 229 NKGFLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEAELKVTNNAGHSAFDP---NNLAALVHALE 303 (306)
T ss_pred HhchhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCCCCh---HHHHHHHHHHH
Confidence 00 11123455666 699999999999999999999999999999999999999998632 23355555544
No 40
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.94 E-value=5.8e-25 Score=191.57 Aligned_cols=251 Identities=16% Similarity=0.186 Sum_probs=176.9
Q ss_pred eeeEEEcCceEEEEEcCCCC---ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGA---QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~---p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
..+...+|..++|..+.... .+||++||.+.++ ..|..++..|..+||.|+++|+|| ||.|..
T Consensus 12 ~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~-~ry~~la~~l~~~G~~V~~~D~RG-------------hG~S~r 77 (298)
T COG2267 12 GYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHS-GRYEELADDLAARGFDVYALDLRG-------------HGRSPR 77 (298)
T ss_pred ceeecCCCceEEEEeecCCCCCCcEEEEecCchHHH-HHHHHHHHHHHhCCCEEEEecCCC-------------CCCCCC
Confidence 56667799999999885432 4899999999996 999999999999999999999999 999973
Q ss_pred -CCCCCCCccchHHHHHHHHHHHHHhC----CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc--hhHHHH
Q psy4974 151 -KGRSFVPFQYIEEDVDIAYELLKLLG----VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI--DNVRVF 223 (345)
Q Consensus 151 -~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~ 223 (345)
... ...++.++.+++..+++... ..+++++||||||.+++.++.+++..|+++|+.+|...... ......
T Consensus 78 ~~rg---~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~ 154 (298)
T COG2267 78 GQRG---HVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILA 154 (298)
T ss_pred CCcC---CchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHH
Confidence 322 34458888889988888775 35999999999999999999999999999999999877663 111111
Q ss_pred HHh-HhccCC------Ch-----------hhHHHHHHHcccCCc-hhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCC
Q psy4974 224 EGM-RRLSNW------SP-----------MARSEVLKAYDNDVN-YITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVP 284 (345)
Q Consensus 224 ~~~-~~~~~~------~~-----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 284 (345)
... .....+ .. .......+.+..++. ........|......... .........+++|
T Consensus 155 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~----~~~~~~~~~~~~P 230 (298)
T COG2267 155 RLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGR----VPALRDAPAIALP 230 (298)
T ss_pred HHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhc----ccchhccccccCC
Confidence 100 000000 00 001112222332221 112222233333322222 1123345678899
Q ss_pred EEEEEeCCCCCCC-hHHHHHHHhhc--CCcEEEEeCCCCCcccccC-h--HHHHHHHHHHHHhhccC
Q psy4974 285 VLVFHSADDVMVS-TQQVQSLLNQL--KFCQYYQFSSGGHSCHIKH-G--QVFNEISRNFILEENKT 345 (345)
Q Consensus 285 vl~i~G~~D~~v~-~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~-~--~~~~~~i~~fl~~~~k~ 345 (345)
+|+++|++|.+++ .+...++.+.. ++.++++++|+.|.++.|. . +++.+.+.+||.+..++
T Consensus 231 vLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 231 VLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALPS 297 (298)
T ss_pred EEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhccC
Confidence 9999999999999 67777776665 5678999999999998863 4 78999999999987653
No 41
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.94 E-value=5e-25 Score=174.55 Aligned_cols=222 Identities=16% Similarity=0.178 Sum_probs=155.4
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
..|+||||+.|++ ...+.+.++|.++||+|.+|.+|| ||.....--.. +..+|.+.+.+..+.+.
T Consensus 16 ~AVLllHGFTGt~-~Dvr~Lgr~L~e~GyTv~aP~ypG-------------HG~~~e~fl~t-~~~DW~~~v~d~Y~~L~ 80 (243)
T COG1647 16 RAVLLLHGFTGTP-RDVRMLGRYLNENGYTVYAPRYPG-------------HGTLPEDFLKT-TPRDWWEDVEDGYRDLK 80 (243)
T ss_pred EEEEEEeccCCCc-HHHHHHHHHHHHCCceEecCCCCC-------------CCCCHHHHhcC-CHHHHHHHHHHHHHHHH
Confidence 4899999999996 999999999999999999999999 99874322222 33344444555556666
Q ss_pred HhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHH---HHHHhHhccCCChhhHHHHHHHcccCCch
Q psy4974 174 LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVR---VFEGMRRLSNWSPMARSEVLKAYDNDVNY 250 (345)
Q Consensus 174 ~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (345)
..+.+.|.++|.||||.+|+.+|.++| ++++|.++++......... .....+..........+.+.+.+..-
T Consensus 81 ~~gy~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~--- 155 (243)
T COG1647 81 EAGYDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSY--- 155 (243)
T ss_pred HcCCCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHh---
Confidence 668889999999999999999999998 9999999987663322211 11111222222211122211111110
Q ss_pred hhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC--CcEEEEeCCCCCcccc-cC
Q psy4974 251 ITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK--FCQYYQFSSGGHSCHI-KH 327 (345)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-~~ 327 (345)
...+......+..+++. ....+..|..|++++.|.+|+++|.+.+..+.+.+. +.++.+++++||.+-. ++
T Consensus 156 -~~~~~~~~~~~~~~i~~-----~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~E 229 (243)
T COG1647 156 -KDTPMTTTAQLKKLIKD-----ARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKE 229 (243)
T ss_pred -hcchHHHHHHHHHHHHH-----HHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchh
Confidence 01111112222222222 245577889999999999999999999999998874 5699999999999877 56
Q ss_pred hHHHHHHHHHHHHh
Q psy4974 328 GQVFNEISRNFILE 341 (345)
Q Consensus 328 ~~~~~~~i~~fl~~ 341 (345)
.+.+.+.+..||+.
T Consensus 230 rd~v~e~V~~FL~~ 243 (243)
T COG1647 230 RDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHHHHHHHhhC
Confidence 89999999999963
No 42
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.93 E-value=9.1e-25 Score=227.36 Aligned_cols=243 Identities=19% Similarity=0.255 Sum_probs=162.8
Q ss_pred EEEEEcCC--CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC-----CCC
Q psy4974 84 IRFIKYGS--GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR-----SFV 156 (345)
Q Consensus 84 l~~~~~g~--~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~-----~~~ 156 (345)
++|...|+ ..|+|||+||++++. ..|..++..|.+. |+|+++|+|| ||.|..... ..
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~-~~w~~~~~~L~~~-~rVi~~Dl~G-------------~G~S~~~~~~~~~~~~- 1423 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTG-EDWIPIMKAISGS-ARCISIDLPG-------------HGGSKIQNHAKETQTE- 1423 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCH-HHHHHHHHHHhCC-CEEEEEcCCC-------------CCCCCCcccccccccc-
Confidence 45556664 347999999999995 8999999999876 9999999999 999865421 00
Q ss_pred CccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHh--ccC-C-
Q psy4974 157 PFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRR--LSN-W- 232 (345)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~--~~~-~- 232 (345)
...+++..++++.+++++++.++++|+||||||.+|+.++.++|++|+++|++++.+............... ... .
T Consensus 1424 ~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~ 1503 (1655)
T PLN02980 1424 PTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLI 1503 (1655)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHH
Confidence 122678889999999999999999999999999999999999999999999998765432211111100000 000 0
Q ss_pred ChhhHHHHHHHcccC-------CchhhhhHHHH-----HHHHHHHHHh---hCchhhhccCCCCCCCEEEEEeCCCCCCC
Q psy4974 233 SPMARSEVLKAYDND-------VNYITGIFNQY-----VDMVNLIFKS---YGRNVYQELLPYVDVPVLVFHSADDVMVS 297 (345)
Q Consensus 233 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~ 297 (345)
..........++... ........... ...+...+.. ....+....+.++++|+|+|+|++|.+++
T Consensus 1504 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~ 1583 (1655)
T PLN02980 1504 DHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK 1583 (1655)
T ss_pred hhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH
Confidence 000001111111110 00000000000 0011111111 11223456688999999999999999875
Q ss_pred hHHHHHHHhhcCC------------cEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 298 TQQVQSLLNQLKF------------CQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 298 ~~~~~~~~~~~~~------------~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+.++++.+.+++ +++++++++||++++|+|+++++.|.+||.+..
T Consensus 1584 -~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1584 -QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred -HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhcc
Confidence 566677776665 489999999999999999999999999998754
No 43
>PLN02511 hydrolase
Probab=99.93 E-value=6.6e-25 Score=199.22 Aligned_cols=252 Identities=14% Similarity=0.196 Sum_probs=151.5
Q ss_pred eeeEEE-cCceEEEE--E-----cCCCCceEEEEcCcCCCchhhH-HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCC
Q psy4974 74 EGFFSI-KGCDIRFI--K-----YGSGAQVLFFTYGVLGEIRNSF-KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSG 144 (345)
Q Consensus 74 ~~~~~~-~g~~l~~~--~-----~g~~~p~vv~lHG~~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~ 144 (345)
...+.. ||..+.+- . ....+|+||++||+++++...| ..++..+.++||+|+++|+||
T Consensus 73 re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG------------- 139 (388)
T PLN02511 73 RECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRG------------- 139 (388)
T ss_pred EEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCC-------------
Confidence 334444 67666542 1 1234578999999988753445 456666767789999999999
Q ss_pred CCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC----ccEEEEEeChhHHHHHHHHHhCCcc--cceeeEeccCCCCCch
Q psy4974 145 YGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGV----CKVSLFGWCDGGHLSFVFSMKYPHM--VHKLVIWGTKSFLTID 218 (345)
Q Consensus 145 ~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~i~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~ 218 (345)
||.|......+ . ....++|+.++++.+.. .+++++||||||.+++.++.++|++ |.++++++++......
T Consensus 140 ~G~s~~~~~~~-~---~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~ 215 (388)
T PLN02511 140 CADSPVTTPQF-Y---SASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIA 215 (388)
T ss_pred CCCCCCCCcCE-E---cCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHH
Confidence 99997543332 1 12335555555555543 5899999999999999999999887 8888888765542111
Q ss_pred hHHHHHHhHhcc-C-CChhhHHHH---HHHcccCCc-h----h--hhhHHHHHHHHHHHH-------HhhCchhhhccCC
Q psy4974 219 NVRVFEGMRRLS-N-WSPMARSEV---LKAYDNDVN-Y----I--TGIFNQYVDMVNLIF-------KSYGRNVYQELLP 279 (345)
Q Consensus 219 ~~~~~~~~~~~~-~-~~~~~~~~~---~~~~~~~~~-~----~--~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~ 279 (345)
............ . ......... ...+..... + . ......+.+.+.... ..+...+....+.
T Consensus 216 ~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~ 295 (388)
T PLN02511 216 DEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIK 295 (388)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhc
Confidence 100000000000 0 000000000 000000000 0 0 001111111111110 0011122345688
Q ss_pred CCCCCEEEEEeCCCCCCChHHH-HHHHhhcCCcEEEEeCCCCCcccccChHH------HHHHHHHHHHhh
Q psy4974 280 YVDVPVLVFHSADDVMVSTQQV-QSLLNQLKFCQYYQFSSGGHSCHIKHGQV------FNEISRNFILEE 342 (345)
Q Consensus 280 ~i~~Pvl~i~G~~D~~v~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~~~~~------~~~~i~~fl~~~ 342 (345)
+|++|+|+|+|++|+++|.+.. ....+..+++++++++++||..++|.|+. +.+.+.+||+..
T Consensus 296 ~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 296 HVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred cCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHH
Confidence 8999999999999999997654 45667789999999999999999999876 589999999754
No 44
>KOG1455|consensus
Probab=99.93 E-value=5.5e-24 Score=177.16 Aligned_cols=247 Identities=15% Similarity=0.169 Sum_probs=170.8
Q ss_pred eEEEcCceEEEEEcCC-----CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 76 FFSIKGCDIRFIKYGS-----GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 76 ~~~~~g~~l~~~~~g~-----~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
+...+|..+++..|-+ .+..|+++||+++.+...|..++..|+..||.|+++|++| ||.|+.
T Consensus 32 ~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~G-------------hG~SdG 98 (313)
T KOG1455|consen 32 FTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEG-------------HGRSDG 98 (313)
T ss_pred EEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccC-------------CCcCCC
Confidence 3444899999888743 1237999999998855888999999999999999999999 999985
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCC------ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh-----
Q psy4974 151 KGRSFVPFQYIEEDVDIAYELLKLLGV------CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN----- 219 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~----- 219 (345)
... .+.+++..++|+...++.... .+.+++||||||.+++.++.+.|+...++|+++|.....+..
T Consensus 99 l~~---yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~ 175 (313)
T KOG1455|consen 99 LHA---YVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPP 175 (313)
T ss_pred Ccc---cCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcH
Confidence 443 345778889999988886421 389999999999999999999999999999999966543221
Q ss_pred -HHHHHHhHh-ccCCC---------hhhHHH-HHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEE
Q psy4974 220 -VRVFEGMRR-LSNWS---------PMARSE-VLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLV 287 (345)
Q Consensus 220 -~~~~~~~~~-~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~ 287 (345)
......+.. +..|. ...+.. .......++...... -.+.....+++. ..+....+.++++|+++
T Consensus 176 v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~--pRl~T~~ElLr~--~~~le~~l~~vtvPfli 251 (313)
T KOG1455|consen 176 VISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGK--PRLKTAYELLRV--TADLEKNLNEVTVPFLI 251 (313)
T ss_pred HHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCC--ccHHHHHHHHHH--HHHHHHhcccccccEEE
Confidence 111111111 11221 001111 111111111000000 001111111111 12346678899999999
Q ss_pred EEeCCCCCCChHHHHHHHhhcC--CcEEEEeCCCCCcccc----cChHHHHHHHHHHHHhh
Q psy4974 288 FHSADDVMVSTQQVQSLLNQLK--FCQYYQFSSGGHSCHI----KHGQVFNEISRNFILEE 342 (345)
Q Consensus 288 i~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~~ 342 (345)
+||++|.++.+..++.+.+..+ +.++++|||+-|..+. |+-+.+...|.+||+++
T Consensus 252 lHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 252 LHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred EecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999999999999874 6799999999999875 34467788899999864
No 45
>PRK05855 short chain dehydrogenase; Validated
Probab=99.93 E-value=6.8e-24 Score=204.20 Aligned_cols=249 Identities=13% Similarity=0.089 Sum_probs=159.6
Q ss_pred eeeEEEcCceEEEEEcCCC-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
..++..+|.+++|...|+. .|+|||+||++++. ..|..+++.|. .||+|+++|+|| ||.|+.+.
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~-~~w~~~~~~L~-~~~~Vi~~D~~G-------------~G~S~~~~ 69 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNH-EVWDGVAPLLA-DRFRVVAYDVRG-------------AGRSSAPK 69 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchH-HHHHHHHHHhh-cceEEEEecCCC-------------CCCCCCCC
Confidence 5566779999999998853 47999999999995 99999999995 469999999999 99997543
Q ss_pred CCCCCccchHHHHHHHHHHHHHhCCcc-EEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCCCCchhHHHHH-----
Q psy4974 153 RSFVPFQYIEEDVDIAYELLKLLGVCK-VSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSFLTIDNVRVFE----- 224 (345)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~~~~~~-i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~----- 224 (345)
.. ...+++++++++.+++++++.++ ++|+||||||.+++.++.+. ++++..++.++++.... ......
T Consensus 70 ~~--~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~ 145 (582)
T PRK05855 70 RT--AAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDH--VGFWLRSGLRR 145 (582)
T ss_pred cc--cccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHH--HHHHHhhcccc
Confidence 22 11268889999999999998765 99999999999998887762 34455554444322100 000000
Q ss_pred --------HhHhccC-----------CChh-----hHHHHHHHcccCCchhhhh-H-----HHHHHHHHHHHHhhCchhh
Q psy4974 225 --------GMRRLSN-----------WSPM-----ARSEVLKAYDNDVNYITGI-F-----NQYVDMVNLIFKSYGRNVY 274 (345)
Q Consensus 225 --------~~~~~~~-----------~~~~-----~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~ 274 (345)
....... .... ........+.......... . ...................
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (582)
T PRK05855 146 PTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLS 225 (582)
T ss_pred cchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhc
Confidence 0000000 0000 0000000000000000000 0 0000000000000001111
Q ss_pred hccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 275 QELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 275 ~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
...+..+++|+++|+|++|.++|....+.+.+.+++.++++++ +||+++.|+|+++.+.|.+|+.+.
T Consensus 226 ~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~ 292 (582)
T PRK05855 226 RPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAV 292 (582)
T ss_pred cCccCCccCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCcchhhChhHHHHHHHHHHHhc
Confidence 2234558999999999999999999999998888888888886 799999999999999999999864
No 46
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.92 E-value=2.7e-23 Score=187.32 Aligned_cols=261 Identities=20% Similarity=0.293 Sum_probs=169.9
Q ss_pred EEcCceEEEEEcCC----CCceEEEEcCcCCCchh------------hHHHHH---HhhCCCCeEEEEeCCCCchhhhcc
Q psy4974 78 SIKGCDIRFIKYGS----GAQVLFFTYGVLGEIRN------------SFKKQL---TAFDPKLFTSIFWDPPGNVVLYLL 138 (345)
Q Consensus 78 ~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~------------~~~~~~---~~L~~~G~~vi~~D~~G~~~~~~~ 138 (345)
.+...+|.|..+|. +.++||++|++.++++. -|..++ ..|..+-|.||++|..|++..+.-
T Consensus 37 ~l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p 116 (389)
T PRK06765 37 TIPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDP 116 (389)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCC
Confidence 45778999999985 23699999999886321 266665 235444599999999993322111
Q ss_pred --CCc---c--CCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEE-EEEeChhHHHHHHHHHhCCcccceeeEec
Q psy4974 139 --GKT---C--SGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVS-LFGWCDGGHLSFVFSMKYPHMVHKLVIWG 210 (345)
Q Consensus 139 --g~~---~--~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 210 (345)
|.| + +++|.+... .+ +..++.++++++.+++++++++++. ++||||||++|+.+|.++|++|+++|+++
T Consensus 117 ~~g~tgp~s~~p~tg~~~~~--~f-P~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia 193 (389)
T PRK06765 117 NVITTGPASINPKTGKPYGM--DF-PVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVI 193 (389)
T ss_pred CCCCCCCCCCCcCCCCccCC--CC-CcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEe
Confidence 111 1 222322111 24 4458899999999999999999987 99999999999999999999999999998
Q ss_pred cCCCCCchh-HHHHHH----hHhccCCC---------h-h----hH----------HHHHHHcccCC--chh-------h
Q psy4974 211 TKSFLTIDN-VRVFEG----MRRLSNWS---------P-M----AR----------SEVLKAYDNDV--NYI-------T 252 (345)
Q Consensus 211 ~~~~~~~~~-~~~~~~----~~~~~~~~---------~-~----~~----------~~~~~~~~~~~--~~~-------~ 252 (345)
+........ ...... +..-..|. + . .+ ..+...+.... ... .
T Consensus 194 ~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~ 273 (389)
T PRK06765 194 GNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTL 273 (389)
T ss_pred cCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccch
Confidence 876654433 222221 11111110 0 0 00 00111111100 000 0
Q ss_pred hhHHHHHHHH-------------HHHHHhhCc-------hhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC---
Q psy4974 253 GIFNQYVDMV-------------NLIFKSYGR-------NVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK--- 309 (345)
Q Consensus 253 ~~~~~~~~~~-------------~~~~~~~~~-------~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~--- 309 (345)
...+.++... ..+.+.... .+..+.+.++++|+|+|+|+.|.++|++..+.+.+.++
T Consensus 274 ~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~ 353 (389)
T PRK06765 274 TSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQG 353 (389)
T ss_pred hhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcC
Confidence 0111221111 111111111 13456678899999999999999999999999998886
Q ss_pred -CcEEEEeCC-CCCcccccChHHHHHHHHHHHHh
Q psy4974 310 -FCQYYQFSS-GGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 310 -~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+++++++++ +||..++++|+++++.|.+||++
T Consensus 354 ~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 354 KYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 689999985 89999999999999999999975
No 47
>KOG2382|consensus
Probab=99.92 E-value=1.2e-23 Score=178.04 Aligned_cols=232 Identities=16% Similarity=0.188 Sum_probs=167.4
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
..|+++++||+.|+. ..|+.+...|+.. |..|+++|.|. ||.|.... ..+..++++++..
T Consensus 51 ~~Pp~i~lHGl~GS~-~Nw~sv~k~Ls~~l~~~v~~vd~Rn-------------HG~Sp~~~-----~h~~~~ma~dv~~ 111 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSK-ENWRSVAKNLSRKLGRDVYAVDVRN-------------HGSSPKIT-----VHNYEAMAEDVKL 111 (315)
T ss_pred CCCceEEecccccCC-CCHHHHHHHhcccccCceEEEeccc-------------CCCCcccc-----ccCHHHHHHHHHH
Confidence 448999999999995 9999999999876 78999999999 99996542 2257888999999
Q ss_pred HHHHhC----CccEEEEEeChhH-HHHHHHHHhCCcccceeeEeccCCC-CCc---hhHHHHHHhHhccCC---Chhh--
Q psy4974 171 LLKLLG----VCKVSLFGWCDGG-HLSFVFSMKYPHMVHKLVIWGTKSF-LTI---DNVRVFEGMRRLSNW---SPMA-- 236 (345)
Q Consensus 171 ~l~~~~----~~~i~lvGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~-~~~---~~~~~~~~~~~~~~~---~~~~-- 236 (345)
+++..+ ..+++++|||||| .+++..+...|+.+..+|+++-.+. ... .....+..+...... ....
T Consensus 112 Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke 191 (315)
T KOG2382|consen 112 FIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKE 191 (315)
T ss_pred HHHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHH
Confidence 999874 5699999999999 7888888889999999999986553 221 222333333333222 1111
Q ss_pred --------------HHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccC--CCCCCCEEEEEeCCCCCCChHH
Q psy4974 237 --------------RSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELL--PYVDVPVLVFHSADDVMVSTQQ 300 (345)
Q Consensus 237 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~Pvl~i~G~~D~~v~~~~ 300 (345)
.+.+...+.+...-....|.-....+...+..+....++..+ .....||+++.|.++..++.+.
T Consensus 192 ~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~ 271 (315)
T KOG2382|consen 192 ALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEH 271 (315)
T ss_pred HHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhH
Confidence 111112222111011222223334444444443222233333 5567899999999999999999
Q ss_pred HHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 301 VQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
...+.+.+|++++..++++||++|.|+|+.+.+.|.+|+.+.
T Consensus 272 ~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 272 YPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred HHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999998764
No 48
>PRK13604 luxD acyl transferase; Provisional
Probab=99.92 E-value=7e-23 Score=175.38 Aligned_cols=224 Identities=15% Similarity=0.178 Sum_probs=143.4
Q ss_pred eeeEEE-cCceEEEEEcCC------CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCC-
Q psy4974 74 EGFFSI-KGCDIRFIKYGS------GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGY- 145 (345)
Q Consensus 74 ~~~~~~-~g~~l~~~~~g~------~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~- 145 (345)
.+.+.. +|..|+-....+ ..++||++||+++. ...+..+++.|+++||.|+.+|.+| +
T Consensus 11 ~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~-~~~~~~~A~~La~~G~~vLrfD~rg-------------~~ 76 (307)
T PRK13604 11 DHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARR-MDHFAGLAEYLSSNGFHVIRYDSLH-------------HV 76 (307)
T ss_pred hheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCC-hHHHHHHHHHHHHCCCEEEEecCCC-------------CC
Confidence 455555 788887544322 22689999999998 4779999999999999999999998 8
Q ss_pred CCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHH
Q psy4974 146 GQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEG 225 (345)
Q Consensus 146 G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 225 (345)
|.|+..-..+ +......++..+.++++..+.+++.|+||||||.+|+..|... .++++|+.+|..............
T Consensus 77 GeS~G~~~~~-t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~~~~ 153 (307)
T PRK13604 77 GLSSGTIDEF-TMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERALGY 153 (307)
T ss_pred CCCCCccccC-cccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHhhhc
Confidence 8886554444 3334444555556666666677999999999999997777643 399999999987754222211110
Q ss_pred hHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHh--hCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHH
Q psy4974 226 MRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKS--YGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQS 303 (345)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~ 303 (345)
....++......... +... .+. ...+. ...+.. .......+...++++|+|+|||++|.+||.+.++.
T Consensus 154 --~~~~~p~~~lp~~~d-~~g~--~l~--~~~f~---~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~ 223 (307)
T PRK13604 154 --DYLSLPIDELPEDLD-FEGH--NLG--SEVFV---TDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVID 223 (307)
T ss_pred --ccccCcccccccccc-cccc--ccc--HHHHH---HHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHH
Confidence 000000000000000 0000 000 00111 111100 00112234456678999999999999999999999
Q ss_pred HHhhcC--CcEEEEeCCCCCccc
Q psy4974 304 LLNQLK--FCQYYQFSSGGHSCH 324 (345)
Q Consensus 304 ~~~~~~--~~~~~~~~~~gH~~~ 324 (345)
+.+.++ ++++++++|++|.+.
T Consensus 224 l~e~~~s~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 224 LLDSIRSEQCKLYSLIGSSHDLG 246 (307)
T ss_pred HHHHhccCCcEEEEeCCCccccC
Confidence 999875 689999999999876
No 49
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.91 E-value=5.9e-23 Score=182.85 Aligned_cols=243 Identities=14% Similarity=0.147 Sum_probs=156.3
Q ss_pred EcCceEEEEEcCC--CCceEEEEcCcCCCchhhH-------------------------HHHHHhhCCCCeEEEEeCCCC
Q psy4974 79 IKGCDIRFIKYGS--GAQVLFFTYGVLGEIRNSF-------------------------KKQLTAFDPKLFTSIFWDPPG 131 (345)
Q Consensus 79 ~~g~~l~~~~~g~--~~p~vv~lHG~~~~~~~~~-------------------------~~~~~~L~~~G~~vi~~D~~G 131 (345)
.+|..|++..+.. .+.+|+++||++++....| ..+++.|.++||.|+++|+||
T Consensus 5 ~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rG 84 (332)
T TIGR01607 5 KDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQG 84 (332)
T ss_pred CCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccc
Confidence 4788898888753 3358999999998853222 467899999999999999999
Q ss_pred chhhhccCCccCCCCCCCCCCC-CCCCccchHHHHHHHHHHHHHhC------------------------CccEEEEEeC
Q psy4974 132 NVVLYLLGKTCSGYGQSLPKGR-SFVPFQYIEEDVDIAYELLKLLG------------------------VCKVSLFGWC 186 (345)
Q Consensus 132 ~~~~~~~g~~~~~~G~s~~~~~-~~~~~~~~~~~~~~~~~~l~~~~------------------------~~~i~lvGhS 186 (345)
||.|..... .. ...++++.++|+.++++.+. ..|++|+|||
T Consensus 85 -------------HG~S~~~~~~~g-~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhS 150 (332)
T TIGR01607 85 -------------HGESDGLQNLRG-HINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLS 150 (332)
T ss_pred -------------cCCCcccccccc-chhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeecc
Confidence 999875422 11 23578888888888887642 2479999999
Q ss_pred hhHHHHHHHHHhCCc--------ccceeeEeccCCCCCch-----------hHHHHHHhHhc-cCCC--h---h-hHHHH
Q psy4974 187 DGGHLSFVFSMKYPH--------MVHKLVIWGTKSFLTID-----------NVRVFEGMRRL-SNWS--P---M-ARSEV 240 (345)
Q Consensus 187 ~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~-----------~~~~~~~~~~~-~~~~--~---~-~~~~~ 240 (345)
|||.+++.++..++. .++++|+++|....... .......+... .... . . .....
T Consensus 151 mGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~ 230 (332)
T TIGR01607 151 MGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYV 230 (332)
T ss_pred CccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhh
Confidence 999999999876542 58999988886432110 00111111111 0000 0 0 00011
Q ss_pred HHHcccCCchhh-hhHHHHHHHHHHHHHhhCchhhhccCCCC--CCCEEEEEeCCCCCCChHHHHHHHhhc--CCcEEEE
Q psy4974 241 LKAYDNDVNYIT-GIFNQYVDMVNLIFKSYGRNVYQELLPYV--DVPVLVFHSADDVMVSTQQVQSLLNQL--KFCQYYQ 315 (345)
Q Consensus 241 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvl~i~G~~D~~v~~~~~~~~~~~~--~~~~~~~ 315 (345)
...+..++.... .....+...+....... ...+..+ ++|+|+++|++|.+++.+.++.+.+.. ++.++++
T Consensus 231 ~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~-----~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~ 305 (332)
T TIGR01607 231 NDIIKFDKFRYDGGITFNLASELIKATDTL-----DCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHT 305 (332)
T ss_pred hhHHhcCccccCCcccHHHHHHHHHHHHHH-----HhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEE
Confidence 122222211111 11112222222221111 1123334 789999999999999999999888765 4689999
Q ss_pred eCCCCCcccccC-hHHHHHHHHHHHH
Q psy4974 316 FSSGGHSCHIKH-GQVFNEISRNFIL 340 (345)
Q Consensus 316 ~~~~gH~~~~~~-~~~~~~~i~~fl~ 340 (345)
+++++|.++.|. ++++.+.|.+||+
T Consensus 306 ~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 306 LEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred ECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 999999999874 6899999999986
No 50
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.91 E-value=5e-22 Score=181.19 Aligned_cols=215 Identities=10% Similarity=0.032 Sum_probs=140.3
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
|+||++||+.+.....|..+++.|+++||.|+++|+|| +|.|....... ........+.+++.
T Consensus 195 P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG-------------~G~s~~~~~~~----d~~~~~~avld~l~ 257 (414)
T PRK05077 195 PTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPS-------------VGFSSKWKLTQ----DSSLLHQAVLNALP 257 (414)
T ss_pred cEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCC-------------CCCCCCCCccc----cHHHHHHHHHHHHH
Confidence 55555555544422578888899999999999999999 99985432111 23334455666665
Q ss_pred Hh---CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCch
Q psy4974 174 LL---GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNY 250 (345)
Q Consensus 174 ~~---~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (345)
.. +.+++.++|||+||++|+.+|..+|++|+++|++++.............. ........+...+...
T Consensus 258 ~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~------~p~~~~~~la~~lg~~--- 328 (414)
T PRK05077 258 NVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQ------VPEMYLDVLASRLGMH--- 328 (414)
T ss_pred hCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhh------chHHHHHHHHHHhCCC---
Confidence 54 45789999999999999999999999999999999875321111111110 0001111111111111
Q ss_pred hhhhHHHHHHHHHHHHHhhCchhhhccC-CCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChH
Q psy4974 251 ITGIFNQYVDMVNLIFKSYGRNVYQELL-PYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQ 329 (345)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 329 (345)
.......... +..+... ....+ .++++|+|+|+|++|.++|.+.++.+.+..++.++++++++ ++.+.++
T Consensus 329 -~~~~~~l~~~----l~~~sl~-~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~~~ 399 (414)
T PRK05077 329 -DASDEALRVE----LNRYSLK-VQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRNFD 399 (414)
T ss_pred -CCChHHHHHH----hhhccch-hhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCCHH
Confidence 0011111111 1111100 01112 56899999999999999999999999999999999999976 4557899
Q ss_pred HHHHHHHHHHHhhc
Q psy4974 330 VFNEISRNFILEEN 343 (345)
Q Consensus 330 ~~~~~i~~fl~~~~ 343 (345)
++.+.+.+||+++.
T Consensus 400 ~~~~~i~~wL~~~l 413 (414)
T PRK05077 400 KALQEISDWLEDRL 413 (414)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998753
No 51
>PRK10985 putative hydrolase; Provisional
Probab=99.89 E-value=1.4e-21 Score=173.90 Aligned_cols=236 Identities=15% Similarity=0.186 Sum_probs=140.5
Q ss_pred CceEEEEcCcCCCchh-hHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC-CCCCCCccchHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRN-SFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK-GRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~-~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~-~~~~~~~~~~~~~~~~~~~ 170 (345)
+|+||++||++++... .+..+++.|.++||+|+++|+|| ||.+... ...+ .....++....+..
T Consensus 58 ~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG-------------~g~~~~~~~~~~-~~~~~~D~~~~i~~ 123 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRG-------------CSGEPNRLHRIY-HSGETEDARFFLRW 123 (324)
T ss_pred CCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCC-------------CCCCccCCcceE-CCCchHHHHHHHHH
Confidence 4799999999887423 34568889999999999999999 9877432 2222 22223333333333
Q ss_pred HHHHhCCccEEEEEeChhHHHHHHHHHhCCcc--cceeeEeccCCCCCchhHHHHHHhHhcc-C-CChhhHHHHHH---H
Q psy4974 171 LLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHM--VHKLVIWGTKSFLTIDNVRVFEGMRRLS-N-WSPMARSEVLK---A 243 (345)
Q Consensus 171 ~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~---~ 243 (345)
+.+.++..+++++||||||.++..++..+++. +.++|+++++.................. . +.......... .
T Consensus 124 l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 203 (324)
T PRK10985 124 LQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAA 203 (324)
T ss_pred HHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44446667999999999999888888776543 8899999887653221111100000000 0 00000000000 0
Q ss_pred cccCCc----hhh--hhHHHHHHHH-------HHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC
Q psy4974 244 YDNDVN----YIT--GIFNQYVDMV-------NLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF 310 (345)
Q Consensus 244 ~~~~~~----~~~--~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~ 310 (345)
+..... ... .....+-+.+ ......+...+....+.++++|+++|+|++|++++.+....+.+..++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~ 283 (324)
T PRK10985 204 YPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPN 283 (324)
T ss_pred ccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCC
Confidence 000000 000 0000000000 001111112223456788999999999999999998888777777788
Q ss_pred cEEEEeCCCCCcccccCh-----HHHHHHHHHHHHhh
Q psy4974 311 CQYYQFSSGGHSCHIKHG-----QVFNEISRNFILEE 342 (345)
Q Consensus 311 ~~~~~~~~~gH~~~~~~~-----~~~~~~i~~fl~~~ 342 (345)
.++.+++++||+.+++.. ....+.+.+|++..
T Consensus 284 ~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 284 VEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred eEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 999999999999998742 35667788888654
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.88 E-value=9.9e-21 Score=164.38 Aligned_cols=225 Identities=12% Similarity=0.057 Sum_probs=134.3
Q ss_pred CceEEEEcCcCCC---chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGE---IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 93 ~p~vv~lHG~~~~---~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
+++||++||+++. ....|..+++.|+++||.|+++|+|| ||.|.... . ++.+..+++.
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G-------------~G~S~~~~--~----~~~~~~~d~~ 86 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRG-------------MGDSEGEN--L----GFEGIDADIA 86 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCC-------------CCCCCCCC--C----CHHHHHHHHH
Confidence 3578888887642 13457778899999999999999999 99986432 2 3444455555
Q ss_pred HHHHHh-----CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHH-HHHHhHhccCCChhhHHHHHHH
Q psy4974 170 ELLKLL-----GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVR-VFEGMRRLSNWSPMARSEVLKA 243 (345)
Q Consensus 170 ~~l~~~-----~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
+.++.+ +.++++++|||+||.+++.+|.. +++|+++|+++|.......... ............. ......
T Consensus 87 ~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 162 (274)
T TIGR03100 87 AAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSA---DFWRKL 162 (274)
T ss_pred HHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHHHHHHhCh---HHHHHh
Confidence 555554 56789999999999999999865 4689999999987542221111 1100000000000 000111
Q ss_pred cccCCchhhhhHHHHHHHHHHHHHh-------hCchhhhccCCCCCCCEEEEEeCCCCCCChHH-----HHHHHhhc--C
Q psy4974 244 YDNDVNYITGIFNQYVDMVNLIFKS-------YGRNVYQELLPYVDVPVLVFHSADDVMVSTQQ-----VQSLLNQL--K 309 (345)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~-----~~~~~~~~--~ 309 (345)
..... -+..........+...... .........+..+++|+++++|..|...+... ...+.+.+ +
T Consensus 163 ~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~ 241 (274)
T TIGR03100 163 LSGEV-NLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDP 241 (274)
T ss_pred cCCCc-cHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcC
Confidence 11110 0000011111110000000 00112234455679999999999998764221 14455544 7
Q ss_pred CcEEEEeCCCCCccccc-ChHHHHHHHHHHHHh
Q psy4974 310 FCQYYQFSSGGHSCHIK-HGQVFNEISRNFILE 341 (345)
Q Consensus 310 ~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 341 (345)
++++..+++++|++..+ .++++.+.|.+||++
T Consensus 242 ~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 242 GIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred CeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 89999999999998555 459999999999963
No 53
>PRK10566 esterase; Provisional
Probab=99.87 E-value=1.9e-20 Score=160.82 Aligned_cols=214 Identities=14% Similarity=0.131 Sum_probs=129.2
Q ss_pred EEEEEcCC---CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccc
Q psy4974 84 IRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQY 160 (345)
Q Consensus 84 l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~ 160 (345)
++|...+. ..|+||++||++++. ..|..++..|+++||.|+++|+|| ||.+....... ....
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g-------------~G~~~~~~~~~-~~~~ 79 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSK-LVYSYFAVALAQAGFRVIMPDAPM-------------HGARFSGDEAR-RLNH 79 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCccc-chHHHHHHHHHhCCCEEEEecCCc-------------ccccCCCcccc-chhh
Confidence 44545432 237999999999884 889999999999999999999999 98763221111 1111
Q ss_pred ----hHHHHHHHHHHHHH------hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhcc
Q psy4974 161 ----IEEDVDIAYELLKL------LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS 230 (345)
Q Consensus 161 ----~~~~~~~~~~~l~~------~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 230 (345)
..+..+++.++++. ++.++++++|||+||.+++.++.++|+....++++++... . ......
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~---- 150 (249)
T PRK10566 80 FWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF-T----SLARTL---- 150 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH-H----HHHHHh----
Confidence 11122333333322 2346899999999999999999988864334444433211 0 000000
Q ss_pred CCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCC-CCCEEEEEeCCCCCCChHHHHHHHhhcC
Q psy4974 231 NWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYV-DVPVLVFHSADDVMVSTQQVQSLLNQLK 309 (345)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvl~i~G~~D~~v~~~~~~~~~~~~~ 309 (345)
+.......... ....... .......+....+.++ ++|+|+++|++|.++|.+.++.+.+.++
T Consensus 151 -------------~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~ 213 (249)
T PRK10566 151 -------------FPPLIPETAAQ-QAEFNNI---VAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALR 213 (249)
T ss_pred -------------ccccccccccc-HHHHHHH---HHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHH
Confidence 00000000000 0001111 1111111223334555 6899999999999999999999988774
Q ss_pred ------CcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 310 ------FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 310 ------~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
++++..++++||.+. ....+.+.+||++.
T Consensus 214 ~~g~~~~~~~~~~~~~~H~~~----~~~~~~~~~fl~~~ 248 (249)
T PRK10566 214 ERGLDKNLTCLWEPGVRHRIT----PEALDAGVAFFRQH 248 (249)
T ss_pred hcCCCcceEEEecCCCCCccC----HHHHHHHHHHHHhh
Confidence 257778999999864 34568889998764
No 54
>PLN02872 triacylglycerol lipase
Probab=99.87 E-value=1.8e-20 Score=169.03 Aligned_cols=259 Identities=14% Similarity=0.119 Sum_probs=157.8
Q ss_pred CCcceeeeEEE-cCceEEEEEcC--------CCCceEEEEcCcCCCchhhHH------HHHHhhCCCCeEEEEeCCCCch
Q psy4974 69 QDVFTEGFFSI-KGCDIRFIKYG--------SGAQVLFFTYGVLGEIRNSFK------KQLTAFDPKLFTSIFWDPPGNV 133 (345)
Q Consensus 69 ~~~~~~~~~~~-~g~~l~~~~~g--------~~~p~vv~lHG~~~~~~~~~~------~~~~~L~~~G~~vi~~D~~G~~ 133 (345)
+...+++.++. ||..|...... .++|+|+++||+++++ ..|. .++..|+++||+|+++|+||
T Consensus 41 gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss-~~w~~~~~~~sla~~La~~GydV~l~n~RG-- 117 (395)
T PLN02872 41 GYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAG-DAWFLNSPEQSLGFILADHGFDVWVGNVRG-- 117 (395)
T ss_pred CCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccc-cceeecCcccchHHHHHhCCCCcccccccc--
Confidence 44455666655 89888877642 1247999999998885 7763 35567888999999999999
Q ss_pred hhhccCCccCCCCCCCC------CCCCCCCccchHHHH-HHHHHHHHHh---CCccEEEEEeChhHHHHHHHHHhCCc--
Q psy4974 134 VLYLLGKTCSGYGQSLP------KGRSFVPFQYIEEDV-DIAYELLKLL---GVCKVSLFGWCDGGHLSFVFSMKYPH-- 201 (345)
Q Consensus 134 ~~~~~g~~~~~~G~s~~------~~~~~~~~~~~~~~~-~~~~~~l~~~---~~~~i~lvGhS~Gg~ia~~~a~~~p~-- 201 (345)
++.|.. ....+++ -++++.+ .|+.++++.+ ..++++++|||+||.+++.++ .+|+
T Consensus 118 -----------~~~s~gh~~~~~~~~~fw~-~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~ 184 (395)
T PLN02872 118 -----------TRWSYGHVTLSEKDKEFWD-WSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVV 184 (395)
T ss_pred -----------cccccCCCCCCccchhccC-CcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHH
Confidence 664421 1111101 1566666 6777777765 347999999999999998555 5675
Q ss_pred -ccceeeEeccCCCCCchhHHHHHH--------hH-hc--cCC--ChhhHHHHHH---------------HcccCCchhh
Q psy4974 202 -MVHKLVIWGTKSFLTIDNVRVFEG--------MR-RL--SNW--SPMARSEVLK---------------AYDNDVNYIT 252 (345)
Q Consensus 202 -~v~~lvl~~~~~~~~~~~~~~~~~--------~~-~~--~~~--~~~~~~~~~~---------------~~~~~~~~~~ 252 (345)
+|+.+++++|.............. +. .+ ... .......+.. +.+.+..+..
T Consensus 185 ~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~ 264 (395)
T PLN02872 185 EMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNA 264 (395)
T ss_pred HHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccch
Confidence 689999999976543221111100 00 00 000 0000111111 1111100000
Q ss_pred hhHHHH---------HHHHHH---HH----------------HhhC-chhhhccCCCC--CCCEEEEEeCCCCCCChHHH
Q psy4974 253 GIFNQY---------VDMVNL---IF----------------KSYG-RNVYQELLPYV--DVPVLVFHSADDVMVSTQQV 301 (345)
Q Consensus 253 ~~~~~~---------~~~~~~---~~----------------~~~~-~~~~~~~l~~i--~~Pvl~i~G~~D~~v~~~~~ 301 (345)
...... .+.+.. .. ..+. ...+.-.+.++ ++|+++++|++|.+++++..
T Consensus 265 ~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv 344 (395)
T PLN02872 265 SRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDV 344 (395)
T ss_pred hhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHH
Confidence 000000 000000 00 0010 11122345666 57999999999999999999
Q ss_pred HHHHhhcCC-cEEEEeCCCCCcc---cccChHHHHHHHHHHHHhhc
Q psy4974 302 QSLLNQLKF-CQYYQFSSGGHSC---HIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 302 ~~~~~~~~~-~~~~~~~~~gH~~---~~~~~~~~~~~i~~fl~~~~ 343 (345)
+.+.+.+++ .+++.+++++|.. ..+.|+++.+.|.+||++..
T Consensus 345 ~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 345 EHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred HHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 999999987 6888899999963 34789999999999998654
No 55
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.87 E-value=6e-21 Score=161.40 Aligned_cols=202 Identities=24% Similarity=0.318 Sum_probs=131.9
Q ss_pred eEEEEeCCCCchhhhccCCccCCCCCCCCC-CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCC
Q psy4974 122 FTSIFWDPPGNVVLYLLGKTCSGYGQSLPK-GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP 200 (345)
Q Consensus 122 ~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p 200 (345)
|+|+++|+|| +|.|++. ...+ ...+..+.++++..+++.++.++++++||||||.+++.+|..+|
T Consensus 1 f~vi~~d~rG-------------~g~S~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p 66 (230)
T PF00561_consen 1 FDVILFDLRG-------------FGYSSPHWDPDF-PDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYP 66 (230)
T ss_dssp EEEEEEECTT-------------STTSSSCCGSGS-CTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSG
T ss_pred CEEEEEeCCC-------------CCCCCCCccCCc-ccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCc
Confidence 7899999999 9999840 1222 33478889999999999999999999999999999999999999
Q ss_pred cccceeeEeccCCC----CC-chhHH-HH-HHhHh-ccC-CC---hhhHHHHH---HHcccC--Cchhhh-hHHHHHH--
Q psy4974 201 HMVHKLVIWGTKSF----LT-IDNVR-VF-EGMRR-LSN-WS---PMARSEVL---KAYDND--VNYITG-IFNQYVD-- 260 (345)
Q Consensus 201 ~~v~~lvl~~~~~~----~~-~~~~~-~~-~~~~~-~~~-~~---~~~~~~~~---~~~~~~--~~~~~~-~~~~~~~-- 260 (345)
++|+++|++++... .. ..... .. ..... ... .. ........ ..+... ...... ....+..
T Consensus 67 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (230)
T PF00561_consen 67 ERVKKLVLISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFA 146 (230)
T ss_dssp GGEEEEEEESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTC
T ss_pred hhhcCcEEEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHH
Confidence 99999999999631 00 00000 00 00000 000 00 00000000 000000 000000 0001100
Q ss_pred ---HHHH----HHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHH
Q psy4974 261 ---MVNL----IFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNE 333 (345)
Q Consensus 261 ---~~~~----~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 333 (345)
.... ........+....+.++++|+++++|++|.++|++....+.+.+|+.++++++++||+.++++|+++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~ 226 (230)
T PF00561_consen 147 ETDAFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNE 226 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHH
T ss_pred HHHHHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhh
Confidence 0000 111122223355667899999999999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q psy4974 334 ISRN 337 (345)
Q Consensus 334 ~i~~ 337 (345)
.|.+
T Consensus 227 ~i~~ 230 (230)
T PF00561_consen 227 IIIK 230 (230)
T ss_dssp HHH-
T ss_pred hhcC
Confidence 8863
No 56
>PRK11071 esterase YqiA; Provisional
Probab=99.86 E-value=1.8e-20 Score=153.23 Aligned_cols=184 Identities=13% Similarity=0.123 Sum_probs=125.0
Q ss_pred ceEEEEcCcCCCchhhHHH--HHHhhCCC--CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKK--QLTAFDPK--LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~--~~~~L~~~--G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
|+||++||++++. ..|.. +.+.|.+. +|+|+++|+|| |+ ++.++.+.
T Consensus 2 p~illlHGf~ss~-~~~~~~~~~~~l~~~~~~~~v~~~dl~g-------------~~---------------~~~~~~l~ 52 (190)
T PRK11071 2 STLLYLHGFNSSP-RSAKATLLKNWLAQHHPDIEMIVPQLPP-------------YP---------------ADAAELLE 52 (190)
T ss_pred CeEEEECCCCCCc-chHHHHHHHHHHHHhCCCCeEEeCCCCC-------------CH---------------HHHHHHHH
Confidence 5899999999995 88874 34556442 59999999999 63 23477888
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCc
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVN 249 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (345)
+++++++.++++++||||||.+|+.+|.++|. .+|+++|+.... ...... ..... ..+....
T Consensus 53 ~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~~----~~~~~~---~~~~~-------~~~~~~~- 114 (190)
T PRK11071 53 SLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVRPF----ELLTDY---LGENE-------NPYTGQQ- 114 (190)
T ss_pred HHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCCHH----HHHHHh---cCCcc-------cccCCCc-
Confidence 89999998999999999999999999999983 468888865411 111100 00000 0000000
Q ss_pred hhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChH
Q psy4974 250 YITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQ 329 (345)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 329 (345)
+. ........... . + ...+. .++|+++++|++|+++|.+.+.++.+. ++.++++|++|.+ ...+
T Consensus 115 ~~--~~~~~~~d~~~----~---~-~~~i~-~~~~v~iihg~~De~V~~~~a~~~~~~---~~~~~~~ggdH~f--~~~~ 178 (190)
T PRK11071 115 YV--LESRHIYDLKV----M---Q-IDPLE-SPDLIWLLQQTGDEVLDYRQAVAYYAA---CRQTVEEGGNHAF--VGFE 178 (190)
T ss_pred EE--EcHHHHHHHHh----c---C-CccCC-ChhhEEEEEeCCCCcCCHHHHHHHHHh---cceEEECCCCcch--hhHH
Confidence 00 00111111111 1 1 11233 678999999999999999999999985 4677889999987 4458
Q ss_pred HHHHHHHHHHH
Q psy4974 330 VFNEISRNFIL 340 (345)
Q Consensus 330 ~~~~~i~~fl~ 340 (345)
++.+.+.+|+.
T Consensus 179 ~~~~~i~~fl~ 189 (190)
T PRK11071 179 RYFNQIVDFLG 189 (190)
T ss_pred HhHHHHHHHhc
Confidence 88999999974
No 57
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.85 E-value=1.3e-19 Score=163.10 Aligned_cols=240 Identities=13% Similarity=0.121 Sum_probs=145.2
Q ss_pred cCceEEEEEcC---CCCceEEEEcCcCCCchhh-----HHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 80 KGCDIRFIKYG---SGAQVLFFTYGVLGEIRNS-----FKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 80 ~g~~l~~~~~g---~~~p~vv~lHG~~~~~~~~-----~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
+...++.+... ..+++||++||+..+. .. ++.+++.|.++||+|+++|++| +|.+..
T Consensus 46 ~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~-~~~d~~~~~~~~~~L~~~G~~V~~~D~~g-------------~g~s~~- 110 (350)
T TIGR01836 46 DKVVLYRYTPVKDNTHKTPLLIVYALVNRP-YMLDLQEDRSLVRGLLERGQDVYLIDWGY-------------PDRADR- 110 (350)
T ss_pred CcEEEEEecCCCCcCCCCcEEEeccccccc-eeccCCCCchHHHHHHHCCCeEEEEeCCC-------------CCHHHh-
Confidence 44555544332 1235899999986553 44 3679999999999999999999 887642
Q ss_pred CCCCCCccchH-H-HHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHH--H----
Q psy4974 152 GRSFVPFQYIE-E-DVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRV--F---- 223 (345)
Q Consensus 152 ~~~~~~~~~~~-~-~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~--~---- 223 (345)
.+ +...+. + ..+.+..+.+..+.++++++||||||.+++.++..+|++|+++|+++++.......... .
T Consensus 111 --~~-~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~ 187 (350)
T TIGR01836 111 --YL-TLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHV 187 (350)
T ss_pred --cC-CHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhcccc
Confidence 22 222221 1 22334455566677899999999999999999999999999999999876543221000 0
Q ss_pred ---HHhHhccCCChhhHHHHHHHc---------------------------------ccCCchhhhhHHHHHHHHHHHHH
Q psy4974 224 ---EGMRRLSNWSPMARSEVLKAY---------------------------------DNDVNYITGIFNQYVDMVNLIFK 267 (345)
Q Consensus 224 ---~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 267 (345)
.........+..........+ ..........+.++ +...+.
T Consensus 188 ~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~---~~~~~~ 264 (350)
T TIGR01836 188 DIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQF---VKDFYQ 264 (350)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHH---HHHHHh
Confidence 000000001110000000000 00000000111111 111111
Q ss_pred hhC---ch----hhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC--cEEEEeCCCCCcccccC---hHHHHHHH
Q psy4974 268 SYG---RN----VYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF--CQYYQFSSGGHSCHIKH---GQVFNEIS 335 (345)
Q Consensus 268 ~~~---~~----~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~---~~~~~~~i 335 (345)
... .. .....+.++++|+++++|++|.++|++.++.+.+.++. .++++++ +||..++.+ ++++.+.|
T Consensus 265 ~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i 343 (350)
T TIGR01836 265 QNGLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAI 343 (350)
T ss_pred cCcccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHH
Confidence 110 00 01223567899999999999999999999999998863 5667776 899887754 47899999
Q ss_pred HHHHHh
Q psy4974 336 RNFILE 341 (345)
Q Consensus 336 ~~fl~~ 341 (345)
.+||.+
T Consensus 344 ~~wl~~ 349 (350)
T TIGR01836 344 GKWLQA 349 (350)
T ss_pred HHHHHh
Confidence 999976
No 58
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.83 E-value=1.7e-19 Score=141.57 Aligned_cols=142 Identities=22% Similarity=0.313 Sum_probs=112.1
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH-H
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL-K 173 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l-~ 173 (345)
+||++||++++. ..|..+++.|+++||.|+.+|+|+ +|.+. .... ++++.+.+ .
T Consensus 1 ~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~~~~~-------------~~~~~-------~~~~----~~~~~~~~~~ 55 (145)
T PF12695_consen 1 VVVLLHGWGGSR-RDYQPLAEALAEQGYAVVAFDYPG-------------HGDSD-------GADA----VERVLADIRA 55 (145)
T ss_dssp EEEEECTTTTTT-HHHHHHHHHHHHTTEEEEEESCTT-------------STTSH-------HSHH----HHHHHHHHHH
T ss_pred CEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEEecCC-------------CCccc-------hhHH----HHHHHHHHHh
Confidence 689999999995 889999999999999999999999 87761 1112 22333222 1
Q ss_pred -HhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhh
Q psy4974 174 -LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYIT 252 (345)
Q Consensus 174 -~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (345)
..+.++++++|||+||.+++.++.+. .+++++|++++...
T Consensus 56 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~-------------------------------------- 96 (145)
T PF12695_consen 56 GYPDPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD-------------------------------------- 96 (145)
T ss_dssp HHCTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESSG--------------------------------------
T ss_pred hcCCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCccc--------------------------------------
Confidence 23667999999999999999999988 68999999999211
Q ss_pred hhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC-CcEEEEeCCCCCc
Q psy4974 253 GIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK-FCQYYQFSSGGHS 322 (345)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~gH~ 322 (345)
...+...++|+++++|++|.+++.+..+.+.+.++ +.+++++++++|+
T Consensus 97 ----------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 ----------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ----------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ----------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 11133456799999999999999999999988887 5799999999995
No 59
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.82 E-value=1.2e-18 Score=161.46 Aligned_cols=221 Identities=10% Similarity=0.010 Sum_probs=139.0
Q ss_pred CceEEEEcCcCCCchhhHH-----HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFK-----KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~-----~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
++|||++||+.... ..|. .++++|.++||+|+++|++| +|.+..... + +....+...+.
T Consensus 188 ~~PlLiVp~~i~k~-yilDL~p~~Slv~~L~~qGf~V~~iDwrg-------------pg~s~~~~~-~-ddY~~~~i~~a 251 (532)
T TIGR01838 188 KTPLLIVPPWINKY-YILDLRPQNSLVRWLVEQGHTVFVISWRN-------------PDASQADKT-F-DDYIRDGVIAA 251 (532)
T ss_pred CCcEEEECcccccc-eeeecccchHHHHHHHHCCcEEEEEECCC-------------CCcccccCC-h-hhhHHHHHHHH
Confidence 47999999998774 7774 79999999999999999999 998743321 1 11122334566
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHH----HHHHhC-CcccceeeEeccCCCCCchhHH----------HHH-HhHhccC
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSF----VFSMKY-PHMVHKLVIWGTKSFLTIDNVR----------VFE-GMRRLSN 231 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~----~~a~~~-p~~v~~lvl~~~~~~~~~~~~~----------~~~-~~~~~~~ 231 (345)
+..+.+..+.++++++||||||.++. .+++.. +++|++++++++...+...... ..+ .+.....
T Consensus 252 l~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~ 331 (532)
T TIGR01838 252 LEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGY 331 (532)
T ss_pred HHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCC
Confidence 66777778889999999999999852 245554 7789999999987664422110 011 1111111
Q ss_pred CChhhHHHHHHHcccC--------------CchhhhhHHHH------------HHHHHHHHHhhC-------chhhhccC
Q psy4974 232 WSPMARSEVLKAYDND--------------VNYITGIFNQY------------VDMVNLIFKSYG-------RNVYQELL 278 (345)
Q Consensus 232 ~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~------------~~~~~~~~~~~~-------~~~~~~~l 278 (345)
...........++... ..........| .+.+..++.... .......+
T Consensus 332 lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL 411 (532)
T TIGR01838 332 LDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDL 411 (532)
T ss_pred CCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecch
Confidence 1111111111111110 00000000111 111222221111 11224567
Q ss_pred CCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChH
Q psy4974 279 PYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQ 329 (345)
Q Consensus 279 ~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 329 (345)
.+|++|+++++|++|.++|.+.+..+.+.+++.+..+++++||..++++|.
T Consensus 412 ~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 412 SKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred hhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 789999999999999999999999999999998999999999999988764
No 60
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.81 E-value=6e-18 Score=145.04 Aligned_cols=239 Identities=18% Similarity=0.257 Sum_probs=149.6
Q ss_pred cCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhC---CCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC
Q psy4974 80 KGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFD---PKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV 156 (345)
Q Consensus 80 ~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~---~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~ 156 (345)
.+..+.|...+...|+++++||++++. ..|......+. .. |+++++|+|| ||.|. .. .+
T Consensus 8 ~~~~~~~~~~~~~~~~i~~~hg~~~~~-~~~~~~~~~~~~~~~~-~~~~~~d~~g-------------~g~s~-~~-~~- 69 (282)
T COG0596 8 DGVRLAYREAGGGGPPLVLLHGFPGSS-SVWRPVFKVLPALAAR-YRVIAPDLRG-------------HGRSD-PA-GY- 69 (282)
T ss_pred CCeEEEEeecCCCCCeEEEeCCCCCch-hhhHHHHHHhhccccc-eEEEEecccC-------------CCCCC-cc-cc-
Confidence 445566666655456999999999994 77777333332 24 9999999999 99996 11 12
Q ss_pred CccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCC-----------chhHHHHHH
Q psy4974 157 PFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLT-----------IDNVRVFEG 225 (345)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~-----------~~~~~~~~~ 225 (345)
.....++++..+++.++..+++++|||+||.+++.++.++|++++++|++++..... .........
T Consensus 70 ---~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (282)
T COG0596 70 ---SLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALAD 146 (282)
T ss_pred ---cHHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhh
Confidence 233348889999999998899999999999999999999999999999999765410 000000000
Q ss_pred hHhccCCChhhHHHHHHH--cccC--------Cchhh-hhHHHH---HHHHH-----HHHHhhCchhhhccCCCCCCCEE
Q psy4974 226 MRRLSNWSPMARSEVLKA--YDND--------VNYIT-GIFNQY---VDMVN-----LIFKSYGRNVYQELLPYVDVPVL 286 (345)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~--~~~~--------~~~~~-~~~~~~---~~~~~-----~~~~~~~~~~~~~~l~~i~~Pvl 286 (345)
...... ........... .... ..... ...... ..... ..............+..+++|++
T Consensus 147 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 225 (282)
T COG0596 147 LLLGLD-AAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTL 225 (282)
T ss_pred hhhccc-hhhhhhhhhcccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeE
Confidence 000000 00000000000 0000 00000 000000 00000 00000000012344567789999
Q ss_pred EEEeCCCCCCChHHHHHHHhhcCC-cEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 287 VFHSADDVMVSTQQVQSLLNQLKF-CQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 287 ~i~G~~D~~v~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
+++|++|.+.|......+.+..++ .++.+++++||+.+.++|+.+.+.+.+|+.
T Consensus 226 ~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 226 IIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred EEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 999999977776666777777775 899999999999999999999999988543
No 61
>KOG1552|consensus
Probab=99.80 E-value=1.4e-18 Score=142.16 Aligned_cols=190 Identities=18% Similarity=0.221 Sum_probs=138.4
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
.+++++.||.... ......+...|..+ +++|+++|++| +|.|...+.+. ...++++.+.++
T Consensus 60 ~~~lly~hGNa~D-lgq~~~~~~~l~~~ln~nv~~~DYSG-------------yG~S~G~psE~----n~y~Di~avye~ 121 (258)
T KOG1552|consen 60 HPTLLYSHGNAAD-LGQMVELFKELSIFLNCNVVSYDYSG-------------YGRSSGKPSER----NLYADIKAVYEW 121 (258)
T ss_pred ceEEEEcCCcccc-hHHHHHHHHHHhhcccceEEEEeccc-------------ccccCCCcccc----cchhhHHHHHHH
Confidence 3799999999666 34444555556552 59999999999 99998766544 455556666666
Q ss_pred HHHhC--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCc
Q psy4974 172 LKLLG--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVN 249 (345)
Q Consensus 172 l~~~~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (345)
+++-. .++++|+|+|+|...++.+|.+.| +.++||.+|........ +...
T Consensus 122 Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~------------------------~~~~-- 173 (258)
T KOG1552|consen 122 LRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVA------------------------FPDT-- 173 (258)
T ss_pred HHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhh------------------------ccCc--
Confidence 66543 579999999999999999999998 99999999965521100 0000
Q ss_pred hhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCc-EEEEeCCCCCcccccCh
Q psy4974 250 YITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFC-QYYQFSSGGHSCHIKHG 328 (345)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~ 328 (345)
... . + .+.....+..+.++||+|++||++|.+++.....++.+..++. +-.++.|+||.-. +..
T Consensus 174 ~~~-~---~----------~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~-~~~ 238 (258)
T KOG1552|consen 174 KTT-Y---C----------FDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDI-ELY 238 (258)
T ss_pred ceE-E---e----------eccccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCccc-ccC
Confidence 000 0 0 0001115567788999999999999999999999999999764 7778889999866 556
Q ss_pred HHHHHHHHHHHHhhc
Q psy4974 329 QVFNEISRNFILEEN 343 (345)
Q Consensus 329 ~~~~~~i~~fl~~~~ 343 (345)
.++.+.+.+|+....
T Consensus 239 ~~yi~~l~~f~~~~~ 253 (258)
T KOG1552|consen 239 PEYIEHLRRFISSVL 253 (258)
T ss_pred HHHHHHHHHHHHHhc
Confidence 677788888887543
No 62
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.79 E-value=7e-18 Score=170.53 Aligned_cols=231 Identities=10% Similarity=0.091 Sum_probs=142.3
Q ss_pred CceEEEEcCcCCCchhhHHHH-----HHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQ-----LTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~-----~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
.+||||+||++.+. ..|+.. ++.|.++||+|+++|+ | .++.+...+ ..++.+++..
T Consensus 67 ~~plllvhg~~~~~-~~~d~~~~~s~v~~L~~~g~~v~~~d~-G---------------~~~~~~~~~--~~~l~~~i~~ 127 (994)
T PRK07868 67 GPPVLMVHPMMMSA-DMWDVTRDDGAVGILHRAGLDPWVIDF-G---------------SPDKVEGGM--ERNLADHVVA 127 (994)
T ss_pred CCcEEEECCCCCCc-cceecCCcccHHHHHHHCCCEEEEEcC-C---------------CCChhHcCc--cCCHHHHHHH
Confidence 37999999999985 999864 7889899999999995 3 343332211 1255566655
Q ss_pred HHHHHHH---hCCccEEEEEeChhHHHHHHHHHhC-CcccceeeEeccCCCCCch---h-H-HH-H-------HHhHhcc
Q psy4974 168 AYELLKL---LGVCKVSLFGWCDGGHLSFVFSMKY-PHMVHKLVIWGTKSFLTID---N-V-RV-F-------EGMRRLS 230 (345)
Q Consensus 168 ~~~~l~~---~~~~~i~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~---~-~-~~-~-------~~~~~~~ 230 (345)
+.+.++. ...++++++||||||.+++.+++.+ +++|+++|+++++...... . . .. . ..+....
T Consensus 128 l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (994)
T PRK07868 128 LSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRL 207 (994)
T ss_pred HHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcC
Confidence 5555543 3446899999999999999988755 5689999998876432211 0 0 00 0 0000000
Q ss_pred CCChhh-------------HH---HHHHHcccCCchhh--hhHHH------H--------HHHHHHHHHhhCc----hhh
Q psy4974 231 NWSPMA-------------RS---EVLKAYDNDVNYIT--GIFNQ------Y--------VDMVNLIFKSYGR----NVY 274 (345)
Q Consensus 231 ~~~~~~-------------~~---~~~~~~~~~~~~~~--~~~~~------~--------~~~~~~~~~~~~~----~~~ 274 (345)
..+... .. .+.+.+.... +.. ...+. | .+.+..++..... ...
T Consensus 208 ~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~-~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~ 286 (994)
T PRK07868 208 DIPGWMARTGFQMLDPVKTAKARVDFLRQLHDRE-ALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAI 286 (994)
T ss_pred CCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchh-hhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEE
Confidence 000000 00 0011111110 100 00000 1 1111122111000 011
Q ss_pred ---hccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEE-EEeCCCCCcccc---cChHHHHHHHHHHHHhhc
Q psy4974 275 ---QELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQY-YQFSSGGHSCHI---KHGQVFNEISRNFILEEN 343 (345)
Q Consensus 275 ---~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~---~~~~~~~~~i~~fl~~~~ 343 (345)
...+.++++|+|+|+|++|.++|++..+.+.+.+++.++ .+++++||+.++ ..++++...|.+||.++.
T Consensus 287 ~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 287 NGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLE 362 (994)
T ss_pred CCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhc
Confidence 124789999999999999999999999999999999887 677899999877 457889999999998764
No 63
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.78 E-value=1e-16 Score=130.47 Aligned_cols=216 Identities=17% Similarity=0.161 Sum_probs=153.0
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
++.++++|-.||++ ..|+.+...|... +.++++++|| +|..-... ...+++++++.+...+
T Consensus 7 ~~~L~cfP~AGGsa-~~fr~W~~~lp~~-iel~avqlPG-------------R~~r~~ep----~~~di~~Lad~la~el 67 (244)
T COG3208 7 RLRLFCFPHAGGSA-SLFRSWSRRLPAD-IELLAVQLPG-------------RGDRFGEP----LLTDIESLADELANEL 67 (244)
T ss_pred CceEEEecCCCCCH-HHHHHHHhhCCch-hheeeecCCC-------------cccccCCc----ccccHHHHHHHHHHHh
Confidence 35799999999996 9999999999887 9999999999 77653322 3447888888888776
Q ss_pred H-HhCCccEEEEEeChhHHHHHHHHHhCC---cccceeeEeccCCCCCc--------hhHHHHHHhHhccCCChhhHHHH
Q psy4974 173 K-LLGVCKVSLFGWCDGGHLSFVFSMKYP---HMVHKLVIWGTKSFLTI--------DNVRVFEGMRRLSNWSPMARSEV 240 (345)
Q Consensus 173 ~-~~~~~~i~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
. -..-+++.++||||||++|.++|.+.. ..+.++++.+..+.... ........+..+...++...
T Consensus 68 ~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~l--- 144 (244)
T COG3208 68 LPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELL--- 144 (244)
T ss_pred ccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHh---
Confidence 6 344468999999999999999998742 22667777766444111 11122222222222211110
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC-CcEEEEeCCC
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK-FCQYYQFSSG 319 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~ 319 (345)
.-.+...-.+..+++-+.....+.+... ..++||+.++.|++|..+..+....|.+... ..++.+++ +
T Consensus 145 ---------ed~El~~l~LPilRAD~~~~e~Y~~~~~-~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd-G 213 (244)
T COG3208 145 ---------EDPELMALFLPILRADFRALESYRYPPP-APLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD-G 213 (244)
T ss_pred ---------cCHHHHHHHHHHHHHHHHHhcccccCCC-CCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-C
Confidence 0122233344555555555555544444 5689999999999999999999999998876 67999997 8
Q ss_pred CCcccccChHHHHHHHHHHHHh
Q psy4974 320 GHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 320 gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
||+...++.+++.+.|.+.+..
T Consensus 214 gHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 214 GHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred cceehhhhHHHHHHHHHHHhhh
Confidence 9999999999999999998853
No 64
>PRK11460 putative hydrolase; Provisional
Probab=99.77 E-value=2e-17 Score=139.82 Aligned_cols=182 Identities=13% Similarity=0.115 Sum_probs=115.9
Q ss_pred CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCC--C--CCCCCCCCccchHHHHH
Q psy4974 91 SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQS--L--PKGRSFVPFQYIEEDVD 166 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s--~--~~~~~~~~~~~~~~~~~ 166 (345)
+..|+||++||++++. ..|..+++.|.+.++.+..++++|.... +.. -|.+ + ...... ....+.+..+
T Consensus 14 ~~~~~vIlLHG~G~~~-~~~~~l~~~l~~~~~~~~~i~~~g~~~~---~~~---~g~~W~~~~~~~~~~-~~~~~~~~~~ 85 (232)
T PRK11460 14 PAQQLLLLFHGVGDNP-VAMGEIGSWFAPAFPDALVVSVGGPEPS---GNG---AGRQWFSVQGITEDN-RQARVAAIMP 85 (232)
T ss_pred CCCcEEEEEeCCCCCh-HHHHHHHHHHHHHCCCCEEECCCCCCCc---CCC---CCcccccCCCCCccc-hHHHHHHHHH
Confidence 3457999999999995 9999999999876555555555551000 000 0100 0 000000 1112223333
Q ss_pred HHHHHH----HHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHH
Q psy4974 167 IAYELL----KLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEV 240 (345)
Q Consensus 167 ~~~~~l----~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
.+.+++ +..++ ++++++|||+||.+++.++.++|+.+.+++.+++.....
T Consensus 86 ~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~------------------------ 141 (232)
T PRK11460 86 TFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL------------------------ 141 (232)
T ss_pred HHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc------------------------
Confidence 333333 33343 489999999999999999999988778787765521100
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----CcEEEEe
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----FCQYYQF 316 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~~~~~~~ 316 (345)
. .....+.|++++||++|.++|.+.++++.+.+. +++++++
T Consensus 142 ----~-------------------------------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~ 186 (232)
T PRK11460 142 ----P-------------------------------ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIV 186 (232)
T ss_pred ----c-------------------------------ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 0 001236799999999999999998888887763 4688889
Q ss_pred CCCCCcccccChHHHHHHHHHHH
Q psy4974 317 SSGGHSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 317 ~~~gH~~~~~~~~~~~~~i~~fl 339 (345)
+++||.+..+..+.+.+.+.++|
T Consensus 187 ~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 187 EDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHc
Confidence 99999987555555555555554
No 65
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.76 E-value=2.3e-16 Score=135.84 Aligned_cols=255 Identities=18% Similarity=0.307 Sum_probs=168.0
Q ss_pred EEcCceEEEEEcCCC----CceEEEEcCcCCCc--hh--------hHHHHH---HhhCCCCeEEEEeCCCCchhhhccCC
Q psy4974 78 SIKGCDIRFIKYGSG----AQVLFFTYGVLGEI--RN--------SFKKQL---TAFDPKLFTSIFWDPPGNVVLYLLGK 140 (345)
Q Consensus 78 ~~~g~~l~~~~~g~~----~p~vv~lHG~~~~~--~~--------~~~~~~---~~L~~~G~~vi~~D~~G~~~~~~~g~ 140 (345)
.+.+..|.|+.+|+- ...|+++|++.++. .. -|..++ ..+...-|.||++|..|+ |.-
T Consensus 32 ~l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~-----c~G 106 (368)
T COG2021 32 VLSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGG-----CKG 106 (368)
T ss_pred cccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCC-----CCC
Confidence 457889999999852 24899999999852 12 455555 234444599999999991 100
Q ss_pred ccCCCCCCCCCC------CCCCCccchHHHHHHHHHHHHHhCCccEE-EEEeChhHHHHHHHHHhCCcccceeeEeccCC
Q psy4974 141 TCSGYGQSLPKG------RSFVPFQYIEEDVDIAYELLKLLGVCKVS-LFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKS 213 (345)
Q Consensus 141 ~~~~~G~s~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 213 (345)
+ .|.++..+ ..| +.-++.+++..-..+++++|++++. +||-||||+.|+.++..+|++|.++|.+++..
T Consensus 107 S---tgP~s~~p~g~~yg~~F-P~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~ 182 (368)
T COG2021 107 S---TGPSSINPGGKPYGSDF-PVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAA 182 (368)
T ss_pred C---CCCCCcCCCCCccccCC-CcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccc
Confidence 0 11222111 234 5557888888888899999999988 99999999999999999999999999999977
Q ss_pred CCCchhHHHHHHhHh----ccCCC---------h---------------hhHHHHHHHcccCC---chh----hhhHHHH
Q psy4974 214 FLTIDNVRVFEGMRR----LSNWS---------P---------------MARSEVLKAYDNDV---NYI----TGIFNQY 258 (345)
Q Consensus 214 ~~~~~~~~~~~~~~~----~~~~~---------~---------------~~~~~~~~~~~~~~---~~~----~~~~~~~ 258 (345)
........+....+. -..|. + .....+.+.+.... ... ....+.+
T Consensus 183 r~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESY 262 (368)
T COG2021 183 RLSAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESY 262 (368)
T ss_pred cCCHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHH
Confidence 665554433332222 12221 0 01112222232210 000 0111222
Q ss_pred HHHHH-------------HHHHhhCch-------hhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcE-EEEeC
Q psy4974 259 VDMVN-------------LIFKSYGRN-------VYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQ-YYQFS 317 (345)
Q Consensus 259 ~~~~~-------------~~~~~~~~~-------~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~-~~~~~ 317 (345)
++..- .+.+..+.. +....+.++++|++++.-+.|.+.|++..+.+.+.++.+. +.+++
T Consensus 263 L~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~ 342 (368)
T COG2021 263 LDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREID 342 (368)
T ss_pred HHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEec
Confidence 22111 111111122 2344478899999999999999999999999999998765 66664
Q ss_pred -CCCCcccccChHHHHHHHHHHHHh
Q psy4974 318 -SGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 318 -~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
..||..++.+.+.+...|.+||+.
T Consensus 343 S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 343 SPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred CCCCchhhhcchhhhhHHHHHHhhc
Confidence 579999999899999999999975
No 66
>KOG2564|consensus
Probab=99.76 E-value=3.6e-17 Score=134.23 Aligned_cols=217 Identities=13% Similarity=0.094 Sum_probs=135.8
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCC-CCCCccchHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR-SFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~-~~~~~~~~~~~~~~~~~ 170 (345)
.|.++++||++.+. -.|..++..|... ..+|+++|+|| ||++.-.+. ++ +.+.++.|+.+
T Consensus 74 gpil~l~HG~G~S~-LSfA~~a~el~s~~~~r~~a~DlRg-------------HGeTk~~~e~dl----S~eT~~KD~~~ 135 (343)
T KOG2564|consen 74 GPILLLLHGGGSSA-LSFAIFASELKSKIRCRCLALDLRG-------------HGETKVENEDDL----SLETMSKDFGA 135 (343)
T ss_pred ccEEEEeecCcccc-hhHHHHHHHHHhhcceeEEEeeccc-------------cCccccCChhhc----CHHHHHHHHHH
Confidence 37899999999995 9999999888664 47889999999 999964433 33 67778999999
Q ss_pred HHHHhC---CccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCCCCchhHHHH-HHhHhccCCChhhHHHH----
Q psy4974 171 LLKLLG---VCKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSFLTIDNVRVF-EGMRRLSNWSPMARSEV---- 240 (345)
Q Consensus 171 ~l~~~~---~~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---- 240 (345)
+++.+= ..+|+||||||||.+|.+.|... |. +.+++.++-.-.........+ ..++......+.....+
T Consensus 136 ~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAmeAL~~m~~fL~~rP~~F~Si~~Ai~W~v 214 (343)
T KOG2564|consen 136 VIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAMEALNSMQHFLRNRPKSFKSIEDAIEWHV 214 (343)
T ss_pred HHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechHHHHHHHHHHHHHhcCCccccchhhHHHHHh
Confidence 988863 34899999999999999877653 54 889999887543211111111 01111000000000000
Q ss_pred ---------------HHHcccCC-----------chhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCC
Q psy4974 241 ---------------LKAYDNDV-----------NYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDV 294 (345)
Q Consensus 241 ---------------~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~ 294 (345)
...+.... ......|..|...+.. .+-..++|-++|.+..|.
T Consensus 215 ~sg~~Rn~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~gLS~------------~Fl~~p~~klLilAg~d~ 282 (343)
T KOG2564|consen 215 RSGQLRNRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKGLSD------------KFLGLPVPKLLILAGVDR 282 (343)
T ss_pred ccccccccccceEecchheeeccCCCcEEEEeeccccchhHHHHHhhhhh------------HhhCCCccceeEEecccc
Confidence 00000000 0112233333333332 233457787888777775
Q ss_pred CCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 295 MVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 295 ~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
.-..- .+-+.-...++.+++.+||+.+.+.|..+++.+..|+.++.
T Consensus 283 LDkdL---tiGQMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 283 LDKDL---TIGQMQGKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNR 328 (343)
T ss_pred cCcce---eeeeeccceeeeeecccCceeccCCcchHHHHHHHHHhhhc
Confidence 32210 01111124688999999999999999999999999997763
No 67
>PLN02442 S-formylglutathione hydrolase
Probab=99.76 E-value=1.7e-16 Score=138.19 Aligned_cols=188 Identities=13% Similarity=0.153 Sum_probs=114.3
Q ss_pred CCceEEEEcCcCCCchhhHHH---HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCC-----C---------------
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKK---QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQ-----S--------------- 148 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~-----s--------------- 148 (345)
+.|+|+++||++++. ..|.. +...+...|+.|+.+|..+ +|. +
T Consensus 46 ~~Pvv~~lHG~~~~~-~~~~~~~~~~~~~~~~g~~Vv~pd~~~-------------~g~~~~~~~~~~~~~~~~~~~~~~ 111 (283)
T PLN02442 46 KVPVLYWLSGLTCTD-ENFIQKSGAQRAAAARGIALVAPDTSP-------------RGLNVEGEADSWDFGVGAGFYLNA 111 (283)
T ss_pred CCCEEEEecCCCcCh-HHHHHhhhHHHHHhhcCeEEEecCCCC-------------CCCCCCCCccccccCCCcceeecc
Confidence 448999999999884 66643 3456677799999999876 431 0
Q ss_pred CCCC-CCCCCc-c-chHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHH
Q psy4974 149 LPKG-RSFVPF-Q-YIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEG 225 (345)
Q Consensus 149 ~~~~-~~~~~~-~-~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 225 (345)
.... ..+ .. . ..++..+.+....+.++.++++++||||||..|+.++.++|+++++++++++..........
T Consensus 112 ~~~~~~~~-~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~---- 186 (283)
T PLN02442 112 TQEKWKNW-RMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPWG---- 186 (283)
T ss_pred ccCCCccc-chhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCchh----
Confidence 0000 000 00 0 12333344444455567789999999999999999999999999999999987542211000
Q ss_pred hHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH-HHHHH
Q psy4974 226 MRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ-QVQSL 304 (345)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~-~~~~~ 304 (345)
...+...+... ...+. ..........+...++|+++++|++|.+++.. ..+.+
T Consensus 187 -----------~~~~~~~~g~~----~~~~~-----------~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~ 240 (283)
T PLN02442 187 -----------QKAFTNYLGSD----KADWE-----------EYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENF 240 (283)
T ss_pred -----------hHHHHHHcCCC----hhhHH-----------HcChhhhhhhccccCCCEEEEECCCCccccccccHHHH
Confidence 00011111111 00011 11111122334456889999999999998852 23333
Q ss_pred Hhhc----CCcEEEEeCCCCCccc
Q psy4974 305 LNQL----KFCQYYQFSSGGHSCH 324 (345)
Q Consensus 305 ~~~~----~~~~~~~~~~~gH~~~ 324 (345)
.+.+ .++++.++++++|..+
T Consensus 241 ~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 241 EEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred HHHHHHcCCCeEEEEeCCCCccHH
Confidence 3322 3578999999999765
No 68
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.75 E-value=1.5e-16 Score=132.08 Aligned_cols=234 Identities=16% Similarity=0.192 Sum_probs=155.8
Q ss_pred eEEEEEcC-CCC--ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCcc
Q psy4974 83 DIRFIKYG-SGA--QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQ 159 (345)
Q Consensus 83 ~l~~~~~g-~~~--p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~ 159 (345)
+-.|.+.. ++. .+||-+||.+|+ +..|+.+.+.|.+.|++++.+++|| +|.++.+... ..
T Consensus 22 ~a~y~D~~~~gs~~gTVv~~hGsPGS-H~DFkYi~~~l~~~~iR~I~iN~PG-------------f~~t~~~~~~---~~ 84 (297)
T PF06342_consen 22 QAVYEDSLPSGSPLGTVVAFHGSPGS-HNDFKYIRPPLDEAGIRFIGINYPG-------------FGFTPGYPDQ---QY 84 (297)
T ss_pred EEEEEecCCCCCCceeEEEecCCCCC-ccchhhhhhHHHHcCeEEEEeCCCC-------------CCCCCCCccc---cc
Confidence 34455543 333 389999999999 6999999999999999999999999 9999765432 12
Q ss_pred chHHHHHHHHHHHHHhCCc-cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHh---ccCC-Ch
Q psy4974 160 YIEEDVDIAYELLKLLGVC-KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRR---LSNW-SP 234 (345)
Q Consensus 160 ~~~~~~~~~~~~l~~~~~~-~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~---~~~~-~~ 234 (345)
+-++....+.++++.++++ +++++|||.||-.|+.+|..+| ..++++++|+........+.+..+.. +... +.
T Consensus 85 ~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~ 162 (297)
T PF06342_consen 85 TNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPR 162 (297)
T ss_pred ChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHHHHHHHHHhhH
Confidence 5567788899999999986 7889999999999999999986 78999999988766544433222221 1111 11
Q ss_pred hhHHHH----HHHcccCCchhhhhHHHHHHHHHHHHHh--hCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc
Q psy4974 235 MARSEV----LKAYDNDVNYITGIFNQYVDMVNLIFKS--YGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL 308 (345)
Q Consensus 235 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~ 308 (345)
.....+ .++++-. -..-+.....++.+... .......+.+.+-++|+++++|.+|.++..+...+.+..+
T Consensus 163 ~~~~~i~~~~y~~iG~K----V~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f 238 (297)
T PF06342_consen 163 FIINAIMYFYYRMIGFK----VSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF 238 (297)
T ss_pred HHHHHHHHHHHHHhCee----ecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh
Confidence 111111 1111111 00012222222222211 1112335556666799999999999998876666654432
Q ss_pred C---------------------------CcEEEEeCCCCCcccccChHHHHHHHHHHH
Q psy4974 309 K---------------------------FCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 309 ~---------------------------~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 339 (345)
. ....+.|.+.||+.+-.+++-+++.+...|
T Consensus 239 ~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 239 KGLDHFNIEKEISEEEKPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMF 296 (297)
T ss_pred CCccceeeecCCChhHHHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhh
Confidence 1 112456777899998888888888887765
No 69
>KOG4391|consensus
Probab=99.75 E-value=1.4e-17 Score=131.48 Aligned_cols=214 Identities=14% Similarity=0.138 Sum_probs=146.3
Q ss_pred cCceEEEEE--cCCCCceEEEEcCcCCCchhhHHHHHHhh-CCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC
Q psy4974 80 KGCDIRFIK--YGSGAQVLFFTYGVLGEIRNSFKKQLTAF-DPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV 156 (345)
Q Consensus 80 ~g~~l~~~~--~g~~~p~vv~lHG~~~~~~~~~~~~~~~L-~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~ 156 (345)
|.+++.... ..+..|+++++|+..|+. ...-+.+..+ ...+.+|+.+++|| +|.|+..+.+-
T Consensus 63 D~vtL~a~~~~~E~S~pTlLyfh~NAGNm-Ghr~~i~~~fy~~l~mnv~ivsYRG-------------YG~S~GspsE~- 127 (300)
T KOG4391|consen 63 DKVTLDAYLMLSESSRPTLLYFHANAGNM-GHRLPIARVFYVNLKMNVLIVSYRG-------------YGKSEGSPSEE- 127 (300)
T ss_pred cceeEeeeeecccCCCceEEEEccCCCcc-cchhhHHHHHHHHcCceEEEEEeec-------------cccCCCCcccc-
Confidence 566665332 334668999999999995 5555555443 33469999999999 99998665432
Q ss_pred CccchHHHHHHHHHHHHHh---CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCC
Q psy4974 157 PFQYIEEDVDIAYELLKLL---GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWS 233 (345)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~---~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (345)
.+.-+++.+.+.+..- ...+++++|.|+||.+|+.+|+++.+++.++|+-++....+........
T Consensus 128 ---GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~--------- 195 (300)
T KOG4391|consen 128 ---GLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVF--------- 195 (300)
T ss_pred ---ceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheec---------
Confidence 3444455555555432 3458999999999999999999999999999999887665332211100
Q ss_pred hhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC--Cc
Q psy4974 234 PMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK--FC 311 (345)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~--~~ 311 (345)
+...+.+..+..+ ..+. . ...+...+.|+|++.|..|.+||+...+++.+.++ ..
T Consensus 196 p~~~k~i~~lc~k-----------------n~~~---S---~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~K 252 (300)
T KOG4391|consen 196 PFPMKYIPLLCYK-----------------NKWL---S---YRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTK 252 (300)
T ss_pred cchhhHHHHHHHH-----------------hhhc---c---hhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhh
Confidence 0000000000000 0000 0 22234567899999999999999999999999987 46
Q ss_pred EEEEeCCCCCcccccChHHHHHHHHHHHHhhcc
Q psy4974 312 QYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 312 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~k 344 (345)
++.+||++.|.--.- -+-..++|.+||.+..+
T Consensus 253 rl~eFP~gtHNDT~i-~dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 253 RLAEFPDGTHNDTWI-CDGYFQAIEDFLAEVVK 284 (300)
T ss_pred hheeCCCCccCceEE-eccHHHHHHHHHHHhcc
Confidence 899999999985543 35677899999988764
No 70
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.75 E-value=5.7e-17 Score=135.74 Aligned_cols=197 Identities=17% Similarity=0.192 Sum_probs=117.9
Q ss_pred HHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC--CCCCCCCCccchHHHHHHHHHHHHHh--CCccEEEEEe
Q psy4974 110 FKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL--PKGRSFVPFQYIEEDVDIAYELLKLL--GVCKVSLFGW 185 (345)
Q Consensus 110 ~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~--~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~i~lvGh 185 (345)
|......|+++||.|+.+|+|| ++++|..- ...... ....+++..+.+..+++.. +.+++.++||
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rG----------s~g~g~~~~~~~~~~~-~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~ 71 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRG----------SGGYGKDFHEAGRGDW-GQADVDDVVAAIEYLIKQYYIDPDRIGIMGH 71 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TT----------SSSSHHHHHHTTTTGT-THHHHHHHHHHHHHHHHTTSEEEEEEEEEEE
T ss_pred eeHHHHHHHhCCEEEEEEcCCC----------CCccchhHHHhhhccc-cccchhhHHHHHHHHhccccccceeEEEEcc
Confidence 4456778889999999999999 22222210 011111 1112333333333333332 2358999999
Q ss_pred ChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHH-HHHHHcccCCchhhhhHHHHHHHHHH
Q psy4974 186 CDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARS-EVLKAYDNDVNYITGIFNQYVDMVNL 264 (345)
Q Consensus 186 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (345)
|+||++++.++.++|+++++++..++........... . . ... ..... ... .. .. ..+..
T Consensus 72 S~GG~~a~~~~~~~~~~f~a~v~~~g~~d~~~~~~~~--------~--~-~~~~~~~~~-~~~--~~---~~---~~~~~ 131 (213)
T PF00326_consen 72 SYGGYLALLAATQHPDRFKAAVAGAGVSDLFSYYGTT--------D--I-YTKAEYLEY-GDP--WD---NP---EFYRE 131 (213)
T ss_dssp THHHHHHHHHHHHTCCGSSEEEEESE-SSTTCSBHHT--------C--C-HHHGHHHHH-SST--TT---SH---HHHHH
T ss_pred cccccccchhhcccceeeeeeeccceecchhcccccc--------c--c-ccccccccc-Ccc--ch---hh---hhhhh
Confidence 9999999999999999999999999876543222110 0 0 000 00110 000 00 00 00001
Q ss_pred HHHhhCchhhhccCCC--CCCCEEEEEeCCCCCCChHHHHHHHhhcC----CcEEEEeCCCCCcccc-cChHHHHHHHHH
Q psy4974 265 IFKSYGRNVYQELLPY--VDVPVLVFHSADDVMVSTQQVQSLLNQLK----FCQYYQFSSGGHSCHI-KHGQVFNEISRN 337 (345)
Q Consensus 265 ~~~~~~~~~~~~~l~~--i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-~~~~~~~~~i~~ 337 (345)
.. ....+.+ +++|+|++||++|..||.+.+..+.+.+. ++++++++++||.+.. +...+..+.+.+
T Consensus 132 ~s-------~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~ 204 (213)
T PF00326_consen 132 LS-------PISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILD 204 (213)
T ss_dssp HH-------HGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHH
T ss_pred hc-------cccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHH
Confidence 00 0112223 78999999999999999998888877763 5799999999996553 556688899999
Q ss_pred HHHhhcc
Q psy4974 338 FILEENK 344 (345)
Q Consensus 338 fl~~~~k 344 (345)
||++..|
T Consensus 205 f~~~~l~ 211 (213)
T PF00326_consen 205 FFDKYLK 211 (213)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9998764
No 71
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.74 E-value=1.2e-16 Score=153.55 Aligned_cols=227 Identities=15% Similarity=0.142 Sum_probs=146.0
Q ss_pred cCceEEEEEcCC-----CC--ceEEEEcCcCCCc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC--
Q psy4974 80 KGCDIRFIKYGS-----GA--QVLFFTYGVLGEI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL-- 149 (345)
Q Consensus 80 ~g~~l~~~~~g~-----~~--p~vv~lHG~~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~-- 149 (345)
+|.+++.....+ ++ |+||++||++... ...|....+.|+.+||.|+.+++|| +.|+|..-
T Consensus 374 dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RG----------S~GyG~~F~~ 443 (620)
T COG1506 374 DGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRG----------STGYGREFAD 443 (620)
T ss_pred CCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCC----------CCccHHHHHH
Confidence 788888665432 12 7999999998662 1346777888999999999999999 33344331
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHHhCC---ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh
Q psy4974 150 PKGRSFVPFQYIEEDVDIAYELLKLLGV---CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM 226 (345)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 226 (345)
.....+ ....+++..+.+. ++...+. +++.|+|||.||++++..+.+.| .+++.+...+.........
T Consensus 444 ~~~~~~-g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~------ 514 (620)
T COG1506 444 AIRGDW-GGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFG------ 514 (620)
T ss_pred hhhhcc-CCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhcc------
Confidence 112222 2334555555555 5555442 38999999999999999999888 6777776666443211000
Q ss_pred HhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHh
Q psy4974 227 RRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLN 306 (345)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~ 306 (345)
......+.......... +. -... +..........++++|+|+|||++|..||.+++.++.+
T Consensus 515 ----~~~~~~~~~~~~~~~~~-------~~-----~~~~---~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~ 575 (620)
T COG1506 515 ----ESTEGLRFDPEENGGGP-------PE-----DREK---YEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVD 575 (620)
T ss_pred ----ccchhhcCCHHHhCCCc-------cc-----ChHH---HHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHH
Confidence 00000000000000000 00 0000 11111234466889999999999999999999999887
Q ss_pred hcC----CcEEEEeCCCCCcccc-cChHHHHHHHHHHHHhhcc
Q psy4974 307 QLK----FCQYYQFSSGGHSCHI-KHGQVFNEISRNFILEENK 344 (345)
Q Consensus 307 ~~~----~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~k 344 (345)
.+. +++++++|+.+|.+.. ++...+.+.+.+|+.++.+
T Consensus 576 aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 576 ALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred HHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 773 5799999999999876 5567788999999988765
No 72
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.73 E-value=2.1e-16 Score=133.92 Aligned_cols=235 Identities=14% Similarity=0.110 Sum_probs=130.5
Q ss_pred CceEEEEcCcCCCchhhH-HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC-CCCCCCccchHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSF-KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK-GRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~-~~~~~~~~~~~~~~~~~~~ 170 (345)
.|.||++||+.|++...| +.+.+.+.++||.|++++.|| ++.+... +.-| .....++.+..+..
T Consensus 75 ~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rg-------------cs~~~n~~p~~y-h~G~t~D~~~~l~~ 140 (345)
T COG0429 75 KPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRG-------------CSGEANTSPRLY-HSGETEDIRFFLDW 140 (345)
T ss_pred CceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEeccc-------------ccCCcccCccee-cccchhHHHHHHHH
Confidence 379999999998865555 557788999999999999999 8877542 2223 22223333333333
Q ss_pred HHHHhCCccEEEEEeChhH-HHHHHHHHhCCc-ccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHccc--
Q psy4974 171 LLKLLGVCKVSLFGWCDGG-HLSFVFSMKYPH-MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDN-- 246 (345)
Q Consensus 171 ~l~~~~~~~i~lvGhS~Gg-~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 246 (345)
+.......++..+|.|+|| +++..++.+-.+ .+.+.+.++.+..........-.... ...+.......+.+....
T Consensus 141 l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s-~~ly~r~l~~~L~~~~~~kl 219 (345)
T COG0429 141 LKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFS-LRLYSRYLLRNLKRNAARKL 219 (345)
T ss_pred HHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchh-hhhhHHHHHHHHHHHHHHHH
Confidence 3333456699999999999 555555544321 24555544443322111100000000 000000000000000000
Q ss_pred --CCchhhhhHHHHHHHHH-----------------HHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHh-
Q psy4974 247 --DVNYITGIFNQYVDMVN-----------------LIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLN- 306 (345)
Q Consensus 247 --~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~- 306 (345)
-...........++.+. .....+........+++|.+|+|+|++.+|++++++..-....
T Consensus 220 ~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~ 299 (345)
T COG0429 220 KELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEM 299 (345)
T ss_pred HhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhc
Confidence 00001111111111111 1112222233466788999999999999999999866655555
Q ss_pred hcCCcEEEEeCCCCCccccc----ChH-HHHHHHHHHHHhh
Q psy4974 307 QLKFCQYYQFSSGGHSCHIK----HGQ-VFNEISRNFILEE 342 (345)
Q Consensus 307 ~~~~~~~~~~~~~gH~~~~~----~~~-~~~~~i~~fl~~~ 342 (345)
..|++.+.+-+.+||..++. +|. ...+.+.+||+..
T Consensus 300 ~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 300 LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 55788999999999998876 343 4567777887653
No 73
>KOG4667|consensus
Probab=99.72 E-value=2.2e-16 Score=124.75 Aligned_cols=213 Identities=14% Similarity=0.200 Sum_probs=135.9
Q ss_pred cCCCCceEEEEcCcCCCchh-hHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 89 YGSGAQVLFFTYGVLGEIRN-SFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 89 ~g~~~p~vv~lHG~~~~~~~-~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
.|+. ..+|++||+-++... ....++..|.+.|+.++.+|++| .|+|+.. + .+..+...++|
T Consensus 30 tgs~-e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~G-------------nGeS~gs---f-~~Gn~~~eadD 91 (269)
T KOG4667|consen 30 TGST-EIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSG-------------NGESEGS---F-YYGNYNTEADD 91 (269)
T ss_pred cCCc-eEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecC-------------CCCcCCc---c-ccCcccchHHH
Confidence 3444 499999999887323 34456788999999999999999 9999543 2 33345556788
Q ss_pred HHHHHHHhCCc-c--EEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH-----HHHHHhHhccCCChhhHHH
Q psy4974 168 AYELLKLLGVC-K--VSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV-----RVFEGMRRLSNWSPMARSE 239 (345)
Q Consensus 168 ~~~~l~~~~~~-~--i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 239 (345)
+..+++.+.-. . -+++|||-||.+++.+|.++++ +..+|-+++......... ..++++..-..|.
T Consensus 92 L~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid------ 164 (269)
T KOG4667|consen 92 LHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYLERIKEQGFID------ 164 (269)
T ss_pred HHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHHHHHHhCCcee------
Confidence 88888887532 2 3589999999999999999976 778887777554322211 0111111111110
Q ss_pred HHHHcccCCchhhhhH--HHHHHHHHHHHHhhCchhhhccCC--CCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEE
Q psy4974 240 VLKAYDNDVNYITGIF--NQYVDMVNLIFKSYGRNVYQELLP--YVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQ 315 (345)
Q Consensus 240 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~--~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~ 315 (345)
+.....-+...| +..++.+. .+..+... ..+||||-+||..|.+||.+.+.++++.+|+.++.+
T Consensus 165 ----~~~rkG~y~~rvt~eSlmdrLn--------td~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~i 232 (269)
T KOG4667|consen 165 ----VGPRKGKYGYRVTEESLMDRLN--------TDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEI 232 (269)
T ss_pred ----cCcccCCcCceecHHHHHHHHh--------chhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccCCceEE
Confidence 000000000000 00011111 11122222 246999999999999999999999999999999999
Q ss_pred eCCCCCcccccChHHHHHHHHHHH
Q psy4974 316 FSSGGHSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 316 ~~~~gH~~~~~~~~~~~~~i~~fl 339 (345)
++|+.|..... ..+.......|.
T Consensus 233 IEgADHnyt~~-q~~l~~lgl~f~ 255 (269)
T KOG4667|consen 233 IEGADHNYTGH-QSQLVSLGLEFI 255 (269)
T ss_pred ecCCCcCccch-hhhHhhhcceeE
Confidence 99999987643 233334444443
No 74
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.72 E-value=1.7e-16 Score=135.40 Aligned_cols=106 Identities=20% Similarity=0.120 Sum_probs=84.9
Q ss_pred CceEEEEcCcCCC---chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGE---IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 93 ~p~vv~lHG~~~~---~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
.++||++||+++. ....|..+++.|+++||.|+++|+|| ||.|....... ++..+++|+.
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G-------------~G~S~g~~~~~----~~~~~~~Dv~ 87 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYG-------------CGDSAGDFAAA----RWDVWKEDVA 87 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCC-------------CCCCCCccccC----CHHHHHHHHH
Confidence 3689999999864 13567888999998999999999999 99996543333 4445555554
Q ss_pred ---HHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 170 ---ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 170 ---~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
+++++.+.++++++||||||.+++.+|.++|++++++|+++|....
T Consensus 88 ~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g 136 (266)
T TIGR03101 88 AAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSG 136 (266)
T ss_pred HHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccch
Confidence 4556666789999999999999999999999999999999987653
No 75
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.71 E-value=3.2e-15 Score=129.91 Aligned_cols=202 Identities=13% Similarity=0.120 Sum_probs=117.9
Q ss_pred CceEEEEcCcCCCchhhHHHH--HHhh-CCCCeEEEEeCC--CCchhhhccCCccCCCCCCCCC----------------
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQ--LTAF-DPKLFTSIFWDP--PGNVVLYLLGKTCSGYGQSLPK---------------- 151 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~--~~~L-~~~G~~vi~~D~--~G~~~~~~~g~~~~~~G~s~~~---------------- 151 (345)
.|+|+++||++++. ..|... +..+ .+.|+.|+++|. +| +|.+...
T Consensus 42 ~P~vvllHG~~~~~-~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g-------------~~~~~~~~~w~~g~~~~~~~d~~ 107 (275)
T TIGR02821 42 VPVLWYLSGLTCTH-ENFMIKAGAQRFAAEHGLALVAPDTSPRG-------------TGIAGEDDAWDFGKGAGFYVDAT 107 (275)
T ss_pred CCEEEEccCCCCCc-cHHHhhhHHHHHHhhcCcEEEEeCCCCCc-------------CCCCCCcccccccCCccccccCC
Confidence 47999999999884 777432 3344 456899999998 44 3322110
Q ss_pred CCCCCCccch-HHHHHHHHHHHHH---hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhH
Q psy4974 152 GRSFVPFQYI-EEDVDIAYELLKL---LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMR 227 (345)
Q Consensus 152 ~~~~~~~~~~-~~~~~~~~~~l~~---~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 227 (345)
.........+ ...++++..+++. ++.++++++||||||.+|+.++.++|+.+++++++++........
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~-------- 179 (275)
T TIGR02821 108 EEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRCP-------- 179 (275)
T ss_pred cCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccCc--------
Confidence 0000000022 2335677777776 345689999999999999999999999999999998875432110
Q ss_pred hccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCCh-HHHHHHHh
Q psy4974 228 RLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVST-QQVQSLLN 306 (345)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~-~~~~~~~~ 306 (345)
+. ...+...+..+. ..+.. .......... ....|+++++|+.|..++. .....+.+
T Consensus 180 ----~~---~~~~~~~l~~~~----~~~~~-----------~~~~~~~~~~-~~~~plli~~G~~D~~v~~~~~~~~~~~ 236 (275)
T TIGR02821 180 ----WG---QKAFSAYLGADE----AAWRS-----------YDASLLVADG-GRHSTILIDQGTADQFLDEQLRPDAFEQ 236 (275)
T ss_pred ----ch---HHHHHHHhcccc----cchhh-----------cchHHHHhhc-ccCCCeeEeecCCCcccCccccHHHHHH
Confidence 00 011111111110 00000 0000001111 2356999999999999997 34444444
Q ss_pred hc----CCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 307 QL----KFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 307 ~~----~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
.+ ..+++.++++++|.... -..+.+...+|..+
T Consensus 237 ~l~~~g~~v~~~~~~g~~H~f~~--~~~~~~~~~~~~~~ 273 (275)
T TIGR02821 237 ACRAAGQALTLRRQAGYDHSYYF--IASFIADHLRHHAE 273 (275)
T ss_pred HHHHcCCCeEEEEeCCCCccchh--HHHhHHHHHHHHHh
Confidence 33 35788999999997653 23344444455443
No 76
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.70 E-value=2.7e-15 Score=125.71 Aligned_cols=194 Identities=16% Similarity=0.166 Sum_probs=111.8
Q ss_pred cCCCCceEEEEcCcCCCchhhHHHHHH-hhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC-C-CCCCCCCccchHHHH
Q psy4974 89 YGSGAQVLFFTYGVLGEIRNSFKKQLT-AFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL-P-KGRSFVPFQYIEEDV 165 (345)
Q Consensus 89 ~g~~~p~vv~lHG~~~~~~~~~~~~~~-~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~-~-~~~~~~~~~~~~~~~ 165 (345)
.++..++||++||+|++. ..|..+.. .+......++.++-|........|.....+..-. . +.... +...+.+.+
T Consensus 10 ~~~~~~lvi~LHG~G~~~-~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~-~~~~i~~s~ 87 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSE-DLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPE-DEAGIEESA 87 (216)
T ss_dssp SST-SEEEEEE--TTS-H-HHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB--HHHHHHHH
T ss_pred CCCCceEEEEECCCCCCc-chhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhh-hHHHHHHHH
Confidence 344558999999999995 77776665 3333458888887654111111222000011110 0 11111 233445555
Q ss_pred HHHHHHHHHh-----CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHH
Q psy4974 166 DIAYELLKLL-----GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEV 240 (345)
Q Consensus 166 ~~~~~~l~~~-----~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
+.+.++++.. ..++++++|+|+||.+|+.++.++|+.+.++|++++.........
T Consensus 88 ~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~-------------------- 147 (216)
T PF02230_consen 88 ERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELE-------------------- 147 (216)
T ss_dssp HHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCH--------------------
T ss_pred HHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccccc--------------------
Confidence 5566665542 345899999999999999999999999999999998654211000
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc----CCcEEEEe
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL----KFCQYYQF 316 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~----~~~~~~~~ 316 (345)
.. ..... ++|++++||++|+++|.+.++...+.+ .++++..+
T Consensus 148 -----~~---------------------------~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~ 193 (216)
T PF02230_consen 148 -----DR---------------------------PEALA--KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEY 193 (216)
T ss_dssp -----CC---------------------------HCCCC--TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEE
T ss_pred -----cc---------------------------ccccC--CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEc
Confidence 00 11111 689999999999999988877777666 35789999
Q ss_pred CCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 317 SSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 317 ~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+++||.+. .+..+.+.+||+++
T Consensus 194 ~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 194 PGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp TT-SSS------HHHHHHHHHHHHHH
T ss_pred CCCCCCCC----HHHHHHHHHHHhhh
Confidence 99999875 44556677777653
No 77
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.70 E-value=4.1e-15 Score=125.19 Aligned_cols=251 Identities=14% Similarity=0.176 Sum_probs=148.5
Q ss_pred eeEEEcCceEEEEEcCC---CCceEEEEcCcCCCchhhHHHHH-----HhhCCCCeEEEEeCCCCchhhhccCCccCCCC
Q psy4974 75 GFFSIKGCDIRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQL-----TAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYG 146 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~-----~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G 146 (345)
+.++..-..+++...|+ ++|++|-.|..|-+....|..+. +.+.++ |.|+-+|.|| +.
T Consensus 2 h~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPG-------------qe 67 (283)
T PF03096_consen 2 HDVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPG-------------QE 67 (283)
T ss_dssp EEEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TT-------------TS
T ss_pred ceeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCC-------------CC
Confidence 34555556777777774 36899999999988433376664 456666 9999999999 76
Q ss_pred CCCC-CCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHH
Q psy4974 147 QSLP-KGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEG 225 (345)
Q Consensus 147 ~s~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 225 (345)
.-.. -+..| .+.+++++++++..++++++++.++-+|--.||++...+|..+|++|.++||+++..............
T Consensus 68 ~ga~~~p~~y-~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K 146 (283)
T PF03096_consen 68 EGAATLPEGY-QYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQK 146 (283)
T ss_dssp TT-----TT------HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHH
T ss_pred CCcccccccc-cccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHH
Confidence 5432 23455 677899999999999999999999999999999999999999999999999999977654444333333
Q ss_pred hHh----ccCCChhhHHHHH-HHcccCCc-hhhhhHHHHH---------HHHHHHHHhh-CchhhhccCCCCCCCEEEEE
Q psy4974 226 MRR----LSNWSPMARSEVL-KAYDNDVN-YITGIFNQYV---------DMVNLIFKSY-GRNVYQELLPYVDVPVLVFH 289 (345)
Q Consensus 226 ~~~----~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~---------~~~~~~~~~~-~~~~~~~~l~~i~~Pvl~i~ 289 (345)
+.. ...+.....+.+. ..|+.... ...+..+.+. ..+..++..+ .+.++....+...||+|++.
T Consensus 147 ~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvv 226 (283)
T PF03096_consen 147 LSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVV 226 (283)
T ss_dssp HH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEE
T ss_pred HhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEE
Confidence 221 1223333333322 23332210 0011111111 1222222222 33455556677789999999
Q ss_pred eCCCCCCChHHHHHHHhhcC--CcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 290 SADDVMVSTQQVQSLLNQLK--FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 290 G~~D~~v~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
|+..+.. +.+.++..++. ..++..++++|=.+..|+|+++++.+.=||...
T Consensus 227 G~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 227 GDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp ETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred ecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 9998765 35567777763 578999999999999999999999999999753
No 78
>PLN00021 chlorophyllase
Probab=99.69 E-value=1.1e-15 Score=134.13 Aligned_cols=172 Identities=15% Similarity=0.115 Sum_probs=113.1
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
.|+||++||++.+. ..|..+++.|+++||.|+++|++| ++.... .. ...+..+..+++.+.+
T Consensus 52 ~PvVv~lHG~~~~~-~~y~~l~~~Las~G~~VvapD~~g-------------~~~~~~---~~-~i~d~~~~~~~l~~~l 113 (313)
T PLN00021 52 YPVLLFLHGYLLYN-SFYSQLLQHIASHGFIVVAPQLYT-------------LAGPDG---TD-EIKDAAAVINWLSSGL 113 (313)
T ss_pred CCEEEEECCCCCCc-ccHHHHHHHHHhCCCEEEEecCCC-------------cCCCCc---hh-hHHHHHHHHHHHHhhh
Confidence 37999999999984 889999999999999999999998 653311 11 2222223333333322
Q ss_pred HH-------hCCccEEEEEeChhHHHHHHHHHhCCc-----ccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHH
Q psy4974 173 KL-------LGVCKVSLFGWCDGGHLSFVFSMKYPH-----MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEV 240 (345)
Q Consensus 173 ~~-------~~~~~i~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
+. .+.++++++|||+||.+|+.+|..+++ +++++|+++|......... ..+..
T Consensus 114 ~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~-----------~~p~i---- 178 (313)
T PLN00021 114 AAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQ-----------TPPPV---- 178 (313)
T ss_pred hhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccC-----------CCCcc----
Confidence 22 234689999999999999999998864 5899999998654211000 00000
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCC-----C----CChH-HHHHHHhhcC-
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDV-----M----VSTQ-QVQSLLNQLK- 309 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~-----~----v~~~-~~~~~~~~~~- 309 (345)
+ .+......+.+|+|++.+..|. . .|.. ...++++.++
T Consensus 179 ---l----------------------------~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~ 227 (313)
T PLN00021 179 ---L----------------------------TYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA 227 (313)
T ss_pred ---c----------------------------ccCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCC
Confidence 0 0011122368999999999763 2 2233 3366666664
Q ss_pred CcEEEEeCCCCCcccccCh
Q psy4974 310 FCQYYQFSSGGHSCHIKHG 328 (345)
Q Consensus 310 ~~~~~~~~~~gH~~~~~~~ 328 (345)
.+.+.+++++||+-++++.
T Consensus 228 ~~~~~~~~~~gH~~~~~~~ 246 (313)
T PLN00021 228 PAVHFVAKDYGHMDMLDDD 246 (313)
T ss_pred CeeeeeecCCCcceeecCC
Confidence 6788889999999887544
No 79
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.65 E-value=6.8e-14 Score=118.49 Aligned_cols=215 Identities=18% Similarity=0.202 Sum_probs=135.5
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
++|+|+|+++|+. ..|..+++.|...++.|++++.+| .+.... ...+++++++...+.+.
T Consensus 1 ~~lf~~p~~gG~~-~~y~~la~~l~~~~~~v~~i~~~~-------------~~~~~~------~~~si~~la~~y~~~I~ 60 (229)
T PF00975_consen 1 RPLFCFPPAGGSA-SSYRPLARALPDDVIGVYGIEYPG-------------RGDDEP------PPDSIEELASRYAEAIR 60 (229)
T ss_dssp -EEEEESSTTCSG-GGGHHHHHHHTTTEEEEEEECSTT-------------SCTTSH------EESSHHHHHHHHHHHHH
T ss_pred CeEEEEcCCccCH-HHHHHHHHhCCCCeEEEEEEecCC-------------CCCCCC------CCCCHHHHHHHHHHHhh
Confidence 3899999999995 999999999988569999999999 762211 34478889998888777
Q ss_pred HhCCc-cEEEEEeChhHHHHHHHHHhC---CcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccC--
Q psy4974 174 LLGVC-KVSLFGWCDGGHLSFVFSMKY---PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDND-- 247 (345)
Q Consensus 174 ~~~~~-~i~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 247 (345)
....+ ++.|+|||+||.+|+.+|.+. ...+..++++++................. .....+.......
T Consensus 61 ~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 134 (229)
T PF00975_consen 61 ARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDE------QFIEELRRIGGTPDA 134 (229)
T ss_dssp HHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHH------HHHHHHHHHCHHHHH
T ss_pred hhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHH------HHHHHHHHhcCCchh
Confidence 76655 999999999999999999864 34589999999765432111111100000 0111111111000
Q ss_pred CchhhhhHHHHHHHHHHHHHhhCchhhhccCCCC---CCCEEEEEeCCCCCCChH---HHHHHHhhcC-CcEEEEeCCCC
Q psy4974 248 VNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYV---DVPVLVFHSADDVMVSTQ---QVQSLLNQLK-FCQYYQFSSGG 320 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i---~~Pvl~i~G~~D~~v~~~---~~~~~~~~~~-~~~~~~~~~~g 320 (345)
.......+......+........... .... .+|.++.....|...... ....+.+..+ ..+++.++ ++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~-G~ 209 (229)
T PF00975_consen 135 SLEDEELLARLLRALRDDFQALENYS----IRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVP-GD 209 (229)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHTCS-----TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEES-SE
T ss_pred hhcCHHHHHHHHHHHHHHHHHHhhcc----CCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEc-CC
Confidence 00111122222233222222221111 1112 457889999999887755 3444676665 45788887 79
Q ss_pred Cccccc-ChHHHHHHHHHHH
Q psy4974 321 HSCHIK-HGQVFNEISRNFI 339 (345)
Q Consensus 321 H~~~~~-~~~~~~~~i~~fl 339 (345)
|+.++. +..++++.|.++|
T Consensus 210 H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 210 HFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp TTGHHSTTHHHHHHHHHHHH
T ss_pred CcEecchHHHHHHHHHhccC
Confidence 999887 7788888888876
No 80
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.65 E-value=1.3e-14 Score=128.56 Aligned_cols=233 Identities=12% Similarity=0.094 Sum_probs=129.0
Q ss_pred eeeEEEcCceEEEEE-c--CCCCceEEEEcCcCCCchhh-HHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIK-Y--GSGAQVLFFTYGVLGEIRNS-FKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL 149 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~-~--g~~~p~vv~lHG~~~~~~~~-~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~ 149 (345)
.-.+.+.|..|.... . ++++.|+|++.|+.++-... |..+.++|.++|+.++++|.|| .|.|.
T Consensus 167 ~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG-------------~G~s~ 233 (411)
T PF06500_consen 167 EVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPG-------------QGESP 233 (411)
T ss_dssp EEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TT-------------SGGGT
T ss_pred EEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCC-------------Ccccc
Confidence 444555665555332 2 23333444444544553445 4555577889999999999999 99885
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHHhC---CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh
Q psy4974 150 PKGRSFVPFQYIEEDVDIAYELLKLLG---VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM 226 (345)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 226 (345)
... + +. +.+...+.+.+++.... ..+|.++|.|+||++|.++|...+++++++|.++++...--...
T Consensus 234 ~~~--l-~~-D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~------ 303 (411)
T PF06500_consen 234 KWP--L-TQ-DSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDP------ 303 (411)
T ss_dssp TT---S--S--CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-H------
T ss_pred cCC--C-Cc-CHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccH------
Confidence 332 2 22 22344566666666653 34899999999999999999988889999999999765322111
Q ss_pred HhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccC--CCCCCCEEEEEeCCCCCCChHHHHHH
Q psy4974 227 RRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELL--PYVDVPVLVFHSADDVMVSTQQVQSL 304 (345)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~Pvl~i~G~~D~~v~~~~~~~~ 304 (345)
......+......+...++... . ..+. +......+... ....+ .+.++|+|.+.+++|+++|.+..+.+
T Consensus 304 ~~~~~~P~my~d~LA~rlG~~~--~--~~~~----l~~el~~~SLk-~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~li 374 (411)
T PF06500_consen 304 EWQQRVPDMYLDVLASRLGMAA--V--SDES----LRGELNKFSLK-TQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLI 374 (411)
T ss_dssp HHHTTS-HHHHHHHHHHCT-SC--E---HHH----HHHHGGGGSTT-TTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHhCCcc--C--CHHH----HHHHHHhcCcc-hhccccCCCCCcceEEeecCCCCCCCHHHHHHH
Confidence 1112223333334444444331 0 0111 11111111110 12234 56789999999999999999999999
Q ss_pred HhhcCCcEEEEeCCCC-CcccccChHHHHHHHHHHHHhh
Q psy4974 305 LNQLKFCQYYQFSSGG-HSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 305 ~~~~~~~~~~~~~~~g-H~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+..-.+.+...++... |.. -+.-...+.+||++.
T Consensus 375 a~~s~~gk~~~~~~~~~~~g----y~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 375 AESSTDGKALRIPSKPLHMG----YPQALDEIYKWLEDK 409 (411)
T ss_dssp HHTBTT-EEEEE-SSSHHHH----HHHHHHHHHHHHHHH
T ss_pred HhcCCCCceeecCCCccccc----hHHHHHHHHHHHHHh
Confidence 9887778888887544 322 235667778888754
No 81
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.64 E-value=1.3e-14 Score=121.35 Aligned_cols=173 Identities=12% Similarity=0.055 Sum_probs=99.9
Q ss_pred CCceEEEEcCcCCCchhhHH---HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC------CccchH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFK---KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV------PFQYIE 162 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~---~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~------~~~~~~ 162 (345)
..|+||++||++++. ..+. .+...+.+.||.|+++|++| ++.+.....-+. ......
T Consensus 12 ~~P~vv~lHG~~~~~-~~~~~~~~~~~~a~~~g~~Vv~Pd~~g-------------~~~~~~~~~~~~~~~~~~~~~~~~ 77 (212)
T TIGR01840 12 PRALVLALHGCGQTA-SAYVIDWGWKAAADRYGFVLVAPEQTS-------------YNSSNNCWDWFFTHHRARGTGEVE 77 (212)
T ss_pred CCCEEEEeCCCCCCH-HHHhhhcChHHHHHhCCeEEEecCCcC-------------ccccCCCCCCCCccccCCCCccHH
Confidence 458999999999884 5554 24445555799999999999 653321100000 001112
Q ss_pred HHHHHHHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHH
Q psy4974 163 EDVDIAYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEV 240 (345)
Q Consensus 163 ~~~~~~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
+..+.+..+.+..++ ++++|+|||+||.+++.++.++|+.+.+++.+++.......... ...
T Consensus 78 ~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~--~~~-------------- 141 (212)
T TIGR01840 78 SLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSI--SAT-------------- 141 (212)
T ss_pred HHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccch--hhH--------------
Confidence 222222233333333 48999999999999999999999999999988876543221100 000
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK 309 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~ 309 (345)
... .. ......+.+..... .........|++++||++|.+||.+.++.+.+.+.
T Consensus 142 ~~~-~~-----~~~~~~~~~~~~~~---------~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~ 195 (212)
T TIGR01840 142 PQM-CT-----AATAASVCRLVRGM---------QSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAML 195 (212)
T ss_pred hhc-CC-----CCCHHHHHHHHhcc---------CCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHH
Confidence 000 00 00011111111110 01122233457899999999999998888887763
No 82
>KOG1838|consensus
Probab=99.64 E-value=3.7e-14 Score=124.67 Aligned_cols=243 Identities=14% Similarity=0.203 Sum_probs=139.2
Q ss_pred ceeeeEEE-cCceEEEE--EcC--------CCCceEEEEcCcCCCchhhH-HHHHHhhCCCCeEEEEeCCCCchhhhccC
Q psy4974 72 FTEGFFSI-KGCDIRFI--KYG--------SGAQVLFFTYGVLGEIRNSF-KKQLTAFDPKLFTSIFWDPPGNVVLYLLG 139 (345)
Q Consensus 72 ~~~~~~~~-~g~~l~~~--~~g--------~~~p~vv~lHG~~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~~~~~~~g 139 (345)
.+..+++. ||..+.+- ... ...|.||++||+.+++.+.| +.++..+.++||+|++++.||
T Consensus 93 y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG-------- 164 (409)
T KOG1838|consen 93 YTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRG-------- 164 (409)
T ss_pred ceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCC--------
Confidence 34556666 77666542 111 23489999999998865665 557777888899999999999
Q ss_pred CccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCc---ccceeeEeccCCCC-
Q psy4974 140 KTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH---MVHKLVIWGTKSFL- 215 (345)
Q Consensus 140 ~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~- 215 (345)
+|.+.-......+....++....+..+.+.....++..+|.||||.+...|..+..+ .+.++++++|.-..
T Consensus 165 -----~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~ 239 (409)
T KOG1838|consen 165 -----LGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLA 239 (409)
T ss_pred -----CCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhh
Confidence 998875443221444444444444444445566689999999999999998877543 35566666664432
Q ss_pred -Cch-----hHHHHHHhHhc--cCCChhhHHHHH-HHcccCCchhhhhHHHHHHHH-------HHHHHhhCchhhhccCC
Q psy4974 216 -TID-----NVRVFEGMRRL--SNWSPMARSEVL-KAYDNDVNYITGIFNQYVDMV-------NLIFKSYGRNVYQELLP 279 (345)
Q Consensus 216 -~~~-----~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~ 279 (345)
... ....+..+... .......+..+. +....+........++.-+.+ ...-..+........+.
T Consensus 240 ~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~ 319 (409)
T KOG1838|consen 240 ASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVD 319 (409)
T ss_pred hhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcc
Confidence 000 00111111000 000000000000 000000000000111111111 11112233334567788
Q ss_pred CCCCCEEEEEeCCCCCCChH-HHHHHHhhcCCcEEEEeCCCCCcccccC
Q psy4974 280 YVDVPVLVFHSADDVMVSTQ-QVQSLLNQLKFCQYYQFSSGGHSCHIKH 327 (345)
Q Consensus 280 ~i~~Pvl~i~G~~D~~v~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 327 (345)
+|++|+|+|.+.+|+++|.. .-.......|++-+++-..+||..++|.
T Consensus 320 ~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 320 KIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred cccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 99999999999999999973 4444555567888888889999998876
No 83
>KOG2931|consensus
Probab=99.63 E-value=1.5e-13 Score=114.16 Aligned_cols=251 Identities=15% Similarity=0.192 Sum_probs=166.7
Q ss_pred eeeEEEcCceEEEEEcCC---CCceEEEEcCcCCCchhhHHHHH-----HhhCCCCeEEEEeCCCCchhhhccCCccCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQL-----TAFDPKLFTSIFWDPPGNVVLYLLGKTCSGY 145 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~-----~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~ 145 (345)
++.+...-..+++..+|+ ++|++|-.|..+.+....|..+. ..+.++ |.|+-+|.|| +
T Consensus 24 e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PG-------------q 89 (326)
T KOG2931|consen 24 EHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPG-------------Q 89 (326)
T ss_pred eeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCc-------------c
Confidence 555555556677777764 35789999999988534466553 456677 9999999999 7
Q ss_pred CCCC-CCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHH
Q psy4974 146 GQSL-PKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFE 224 (345)
Q Consensus 146 G~s~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 224 (345)
-... .-+.+| .+.++++.++++..++++++.+.++-+|--.|++|..++|..+|++|-++||+++.+...........
T Consensus 90 e~gAp~~p~~y-~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~ 168 (326)
T KOG2931|consen 90 EDGAPSFPEGY-PYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYN 168 (326)
T ss_pred ccCCccCCCCC-CCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHH
Confidence 5443 234556 67799999999999999999999999999999999999999999999999999987665433332222
Q ss_pred HhH----hccCCChhhHHHH-HHHcccCCc-hhhhhHHHHHH---------HHHHHHHhhC-chhhhccCC----CCCCC
Q psy4974 225 GMR----RLSNWSPMARSEV-LKAYDNDVN-YITGIFNQYVD---------MVNLIFKSYG-RNVYQELLP----YVDVP 284 (345)
Q Consensus 225 ~~~----~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~-~~~~~~~l~----~i~~P 284 (345)
.+. ....+.......+ ...|+++.. -..++.+.+.. .+..++..+. +.++..... .++||
T Consensus 169 K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~ 248 (326)
T KOG2931|consen 169 KVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCP 248 (326)
T ss_pred HHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCcccccc
Confidence 221 1111112222222 223333310 01112222211 2222222222 122222222 45699
Q ss_pred EEEEEeCCCCCCChHHHHHHHhhcC--CcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 285 VLVFHSADDVMVSTQQVQSLLNQLK--FCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 285 vl~i~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+|++.|++.+.+. ...+....+. +..+..+.++|-.+..++|.++.+.+.=|+..
T Consensus 249 vllvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 249 VLLVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred EEEEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 9999999987664 4555555552 57888999999999989999999999999864
No 84
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.62 E-value=2.2e-14 Score=120.53 Aligned_cols=178 Identities=16% Similarity=0.175 Sum_probs=112.5
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccc--------hHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQY--------IEED 164 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~--------~~~~ 164 (345)
.|.||++|++.|-. ...+.+++.|+++||.|+++|+-+ -.......... .... .+..
T Consensus 14 ~~~Vvv~~d~~G~~-~~~~~~ad~lA~~Gy~v~~pD~f~-------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 78 (218)
T PF01738_consen 14 RPAVVVIHDIFGLN-PNIRDLADRLAEEGYVVLAPDLFG-------------GRGAPPSDPEE-AFAAMRELFAPRPEQV 78 (218)
T ss_dssp EEEEEEE-BTTBS--HHHHHHHHHHHHTT-EEEEE-CCC-------------CTS--CCCHHC-HHHHHHHCHHHSHHHH
T ss_pred CCEEEEEcCCCCCc-hHHHHHHHHHHhcCCCEEeccccc-------------CCCCCccchhh-HHHHHHHHHhhhHHHH
Confidence 47999999999984 777889999999999999999865 22100111000 0001 1233
Q ss_pred HHHHHHHHHHh---C---CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHH
Q psy4974 165 VDIAYELLKLL---G---VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARS 238 (345)
Q Consensus 165 ~~~~~~~l~~~---~---~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (345)
.+++.+.++.+ . .++|.++|+|+||.+++.+|... +.+++.|..-|.....
T Consensus 79 ~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~---------------------- 135 (218)
T PF01738_consen 79 AADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPP---------------------- 135 (218)
T ss_dssp HHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGG----------------------
T ss_pred HHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCC----------------------
Confidence 44554444443 3 34899999999999999999887 5799998887721100
Q ss_pred HHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc----CCcEEE
Q psy4974 239 EVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL----KFCQYY 314 (345)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~----~~~~~~ 314 (345)
.......++++|+++++|++|+.++.+..+.+.+.+ ...+++
T Consensus 136 ----------------------------------~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (218)
T PF01738_consen 136 ----------------------------------PPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVH 181 (218)
T ss_dssp ----------------------------------GHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEE
T ss_pred ----------------------------------cchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEE
Confidence 002224457899999999999999988777776665 468999
Q ss_pred EeCCCCCcccccCh--------HHHHHHHHHHHHhh
Q psy4974 315 QFSSGGHSCHIKHG--------QVFNEISRNFILEE 342 (345)
Q Consensus 315 ~~~~~gH~~~~~~~--------~~~~~~i~~fl~~~ 342 (345)
+|+|++|-+..... ++..+.+.+||+++
T Consensus 182 ~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 182 VYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp EETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred ECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 99999998766322 34557788888764
No 85
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.62 E-value=2.2e-13 Score=119.64 Aligned_cols=240 Identities=16% Similarity=0.099 Sum_probs=124.2
Q ss_pred eeEEEcCceEEEEE---c-CCCC-ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhh-----ccCCccCC
Q psy4974 75 GFFSIKGCDIRFIK---Y-GSGA-QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLY-----LLGKTCSG 144 (345)
Q Consensus 75 ~~~~~~g~~l~~~~---~-g~~~-p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~-----~~g~~~~~ 144 (345)
.+...+|..|+-.. . +.++ |.||.+||.++.. ..|...+. ++.+||.|+.+|.||++... ..+.+..+
T Consensus 60 ~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~-~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g 137 (320)
T PF05448_consen 60 SFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRS-GDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKG 137 (320)
T ss_dssp EEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--G-GGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSS
T ss_pred EEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCC-CCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCcc
Confidence 33344676666322 2 2233 7999999999984 66665543 56778999999999944211 01111111
Q ss_pred C---CCCCCCCCCCCCccchHHHHHHHHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 145 Y---GQSLPKGRSFVPFQYIEEDVDIAYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 145 ~---G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
| |..+. .+.+ .+.....|....++.+ +.++|.+.|.|+||.+++.+|+..+ +|++++...|...-
T Consensus 138 ~~~~g~~~~-~e~~----yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d 211 (320)
T PF05448_consen 138 HITRGIDDN-PEDY----YYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD 211 (320)
T ss_dssp STTTTTTS--TTT-----HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS
T ss_pred HHhcCccCc-hHHH----HHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc
Confidence 1 11110 1111 2333334444433332 2348999999999999999999886 69999988875431
Q ss_pred CchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCC
Q psy4974 216 TIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVM 295 (345)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~ 295 (345)
-. ..+..... ...-.......+..... .......+......|......+|+||+++-.|-.|.+
T Consensus 212 ~~---~~~~~~~~--~~~y~~~~~~~~~~d~~-----------~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~ 275 (320)
T PF05448_consen 212 FR---RALELRAD--EGPYPEIRRYFRWRDPH-----------HEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPV 275 (320)
T ss_dssp HH---HHHHHT----STTTHHHHHHHHHHSCT-----------HCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SS
T ss_pred hh---hhhhcCCc--cccHHHHHHHHhccCCC-----------cccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCC
Confidence 10 00000000 00000000111100011 0111222222333444556678899999999999999
Q ss_pred CChHHHHHHHhhcC-CcEEEEeCCCCCcccccChHHH-HHHHHHHHHhh
Q psy4974 296 VSTQQVQSLLNQLK-FCQYYQFSSGGHSCHIKHGQVF-NEISRNFILEE 342 (345)
Q Consensus 296 v~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~-~~~i~~fl~~~ 342 (345)
+|+...-...+.++ ..++.+++..||.. +.++ .+...+||.++
T Consensus 276 cPP~t~fA~yN~i~~~K~l~vyp~~~He~----~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 276 CPPSTQFAAYNAIPGPKELVVYPEYGHEY----GPEFQEDKQLNFLKEH 320 (320)
T ss_dssp S-HHHHHHHHCC--SSEEEEEETT--SST----THHHHHHHHHHHHHH-
T ss_pred CCchhHHHHHhccCCCeeEEeccCcCCCc----hhhHHHHHHHHHHhcC
Confidence 99999999999986 57999999999954 4444 77788888764
No 86
>PRK10162 acetyl esterase; Provisional
Probab=99.61 E-value=6.5e-14 Score=124.15 Aligned_cols=217 Identities=13% Similarity=0.056 Sum_probs=123.9
Q ss_pred CCceEEEEcCcC---CCchhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 92 GAQVLFFTYGVL---GEIRNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 92 ~~p~vv~lHG~~---~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
+.|+||++||++ ++ ...|..++..|+. .|+.|+.+|+|. ......+. ...+..+..+.
T Consensus 80 ~~p~vv~~HGGg~~~g~-~~~~~~~~~~la~~~g~~Vv~vdYrl-------------ape~~~p~----~~~D~~~a~~~ 141 (318)
T PRK10162 80 SQATLFYLHGGGFILGN-LDTHDRIMRLLASYSGCTVIGIDYTL-------------SPEARFPQ----AIEEIVAVCCY 141 (318)
T ss_pred CCCEEEEEeCCcccCCC-chhhhHHHHHHHHHcCCEEEEecCCC-------------CCCCCCCC----cHHHHHHHHHH
Confidence 347899999977 44 3678888888876 489999999998 43221111 11122223334
Q ss_pred HHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhC------CcccceeeEeccCCCCCchhHHHHHHhHhcc-CCChhhHH
Q psy4974 168 AYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKY------PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS-NWSPMARS 238 (345)
Q Consensus 168 ~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 238 (345)
+.+..+.+++ ++++|+|+|+||.+|+.++... +..+.+++++.|......... ........ .+......
T Consensus 142 l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s--~~~~~~~~~~l~~~~~~ 219 (318)
T PRK10162 142 FHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVS--RRLLGGVWDGLTQQDLQ 219 (318)
T ss_pred HHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChh--HHHhCCCccccCHHHHH
Confidence 4444445655 4899999999999999988753 357899999988655321110 00000000 01111111
Q ss_pred HHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc----CCcEEE
Q psy4974 239 EVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL----KFCQYY 314 (345)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~----~~~~~~ 314 (345)
.+...|..+. .. ............+...-.|+++++|+.|.+.+ ..+.+++.+ -.++++
T Consensus 220 ~~~~~y~~~~--------------~~-~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~ 282 (318)
T PRK10162 220 MYEEAYLSND--------------AD-RESPYYCLFNNDLTRDVPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFK 282 (318)
T ss_pred HHHHHhCCCc--------------cc-cCCcccCcchhhhhcCCCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEE
Confidence 1111111100 00 00000000001121122599999999999876 444555444 357999
Q ss_pred EeCCCCCcccc-----cChHHHHHHHHHHHHhhccC
Q psy4974 315 QFSSGGHSCHI-----KHGQVFNEISRNFILEENKT 345 (345)
Q Consensus 315 ~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~~k~ 345 (345)
++++..|.+.. +...+..+.+.+||++..+|
T Consensus 283 ~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~~ 318 (318)
T PRK10162 283 LYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLKT 318 (318)
T ss_pred EECCCceehhhccCchHHHHHHHHHHHHHHHHHhcC
Confidence 99999997643 23456778888999887665
No 87
>COG0400 Predicted esterase [General function prediction only]
Probab=99.60 E-value=7e-14 Score=114.15 Aligned_cols=178 Identities=18% Similarity=0.221 Sum_probs=119.9
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccc----hHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQY----IEEDVDI 167 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~----~~~~~~~ 167 (345)
..|+||++||+|++ ...+.++.+.+..+ +.++.+--+- ..-|.. -..+......| +.+. ...+++.
T Consensus 17 ~~~~iilLHG~Ggd-e~~~~~~~~~~~P~-~~~is~rG~v----~~~g~~---~~f~~~~~~~~-d~edl~~~~~~~~~~ 86 (207)
T COG0400 17 AAPLLILLHGLGGD-ELDLVPLPELILPN-ATLVSPRGPV----AENGGP---RFFRRYDEGSF-DQEDLDLETEKLAEF 86 (207)
T ss_pred CCcEEEEEecCCCC-hhhhhhhhhhcCCC-CeEEcCCCCc----cccCcc---cceeecCCCcc-chhhHHHHHHHHHHH
Confidence 33689999999999 48888877777776 7776653221 111110 00111112223 2222 2334555
Q ss_pred HHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcc
Q psy4974 168 AYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYD 245 (345)
Q Consensus 168 ~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
+..+.++.++ ++++++|+|.||.+++.+..++|+.++++|++++.......
T Consensus 87 l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~--------------------------- 139 (207)
T COG0400 87 LEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE--------------------------- 139 (207)
T ss_pred HHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc---------------------------
Confidence 5566666666 69999999999999999999999999999999997664211
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----CcEEEEeCCCCC
Q psy4974 246 NDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----FCQYYQFSSGGH 321 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~~~gH 321 (345)
.....-..|+++++|+.|+++|...+.++.+.+. +++...++ +||
T Consensus 140 ------------------------------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH 188 (207)
T COG0400 140 ------------------------------LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGH 188 (207)
T ss_pred ------------------------------cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCC
Confidence 0011235799999999999999988888877663 57888888 999
Q ss_pred cccccChHHHHHHHHHHHHh
Q psy4974 322 SCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 322 ~~~~~~~~~~~~~i~~fl~~ 341 (345)
.+. .+-.+.+.+|+.+
T Consensus 189 ~i~----~e~~~~~~~wl~~ 204 (207)
T COG0400 189 EIP----PEELEAARSWLAN 204 (207)
T ss_pred cCC----HHHHHHHHHHHHh
Confidence 775 3444555667654
No 88
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.58 E-value=1.4e-13 Score=107.49 Aligned_cols=181 Identities=15% Similarity=0.113 Sum_probs=125.9
Q ss_pred eEEEEEcC-CCCceEEEEcC-----cCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC
Q psy4974 83 DIRFIKYG-SGAQVLFFTYG-----VLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV 156 (345)
Q Consensus 83 ~l~~~~~g-~~~p~vv~lHG-----~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~ 156 (345)
...|.... +..|..|++|. +..+ ......++..|.+.||.++.+|+|| .|.|...-+.
T Consensus 17 e~~~~~~~~~~~~iAli~HPHPl~gGtm~-nkvv~~la~~l~~~G~atlRfNfRg-------------VG~S~G~fD~-- 80 (210)
T COG2945 17 EGRYEPAKTPAAPIALICHPHPLFGGTMN-NKVVQTLARALVKRGFATLRFNFRG-------------VGRSQGEFDN-- 80 (210)
T ss_pred eeccCCCCCCCCceEEecCCCccccCccC-CHHHHHHHHHHHhCCceEEeecccc-------------cccccCcccC--
Confidence 33344333 34467778775 2233 2556677888999999999999999 9999654332
Q ss_pred CccchHHHHHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCCh
Q psy4974 157 PFQYIEEDVDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSP 234 (345)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (345)
.... .+++..+.++++....+ .+.+.|+|+|+++++.+|.+.|+ ....+.+.|.....
T Consensus 81 GiGE-~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~------------------ 140 (210)
T COG2945 81 GIGE-LEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY------------------ 140 (210)
T ss_pred Ccch-HHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch------------------
Confidence 2222 23344455555555433 34689999999999999999875 44444444433210
Q ss_pred hhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEE
Q psy4974 235 MARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYY 314 (345)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~ 314 (345)
+ ...+....+|.++|+|+.|.+++.....++++. ...+++
T Consensus 141 ------------d---------------------------fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i 180 (210)
T COG2945 141 ------------D---------------------------FSFLAPCPSPGLVIQGDADDVVDLVAVLKWQES-IKITVI 180 (210)
T ss_pred ------------h---------------------------hhhccCCCCCceeEecChhhhhcHHHHHHhhcC-CCCceE
Confidence 0 122445678999999999999999888888887 467888
Q ss_pred EeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 315 QFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 315 ~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
++++++|+++ .+-..+.+.+.+||.
T Consensus 181 ~i~~a~HFF~-gKl~~l~~~i~~~l~ 205 (210)
T COG2945 181 TIPGADHFFH-GKLIELRDTIADFLE 205 (210)
T ss_pred EecCCCceec-ccHHHHHHHHHHHhh
Confidence 9999999988 446788899999984
No 89
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.57 E-value=6.3e-13 Score=118.94 Aligned_cols=230 Identities=12% Similarity=0.130 Sum_probs=144.7
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
|+||++..+.+.....-+.+++.|.+ |+.|+..|+.. -+..+.....+ +++++++.+.+.++
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~-------------p~~vp~~~~~f----~ldDYi~~l~~~i~ 164 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVN-------------ARMVPLSAGKF----DLEDYIDYLIEFIR 164 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCC-------------CCCCchhcCCC----CHHHHHHHHHHHHH
Confidence 69999999987743445778899988 89999999877 65443445666 67777888889999
Q ss_pred HhCCccEEEEEeChhHHHHHHHHHhC-----CcccceeeEeccCCCCCch--hHHHH------HHhHhc-----------
Q psy4974 174 LLGVCKVSLFGWCDGGHLSFVFSMKY-----PHMVHKLVIWGTKSFLTID--NVRVF------EGMRRL----------- 229 (345)
Q Consensus 174 ~~~~~~i~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~--~~~~~------~~~~~~----------- 229 (345)
.+|.+ ++++|+|+||..++.+++.. |.+++++++++++...... ....+ ......
T Consensus 165 ~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g 243 (406)
T TIGR01849 165 FLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPG 243 (406)
T ss_pred HhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccC
Confidence 99877 99999999999977666554 6679999999987765432 11111 001100
Q ss_pred -c--CCChhhHHH-------------HHH---Hcc-cCCchhhh---hHH-----------HHHHHHHHHHHhhCch---
Q psy4974 230 -S--NWSPMARSE-------------VLK---AYD-NDVNYITG---IFN-----------QYVDMVNLIFKSYGRN--- 272 (345)
Q Consensus 230 -~--~~~~~~~~~-------------~~~---~~~-~~~~~~~~---~~~-----------~~~~~~~~~~~~~~~~--- 272 (345)
. ..+...... ... .+. .+...... .++ .+.+.+...+......
T Consensus 244 ~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~ 323 (406)
T TIGR01849 244 AGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGK 323 (406)
T ss_pred CCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCc
Confidence 0 011111100 010 110 00000000 000 1112222222211100
Q ss_pred ----hhhccCCCCC-CCEEEEEeCCCCCCChHHHHHHHhhc---C--CcEEEEeCCCCCccccc---ChHHHHHHHHHHH
Q psy4974 273 ----VYQELLPYVD-VPVLVFHSADDVMVSTQQVQSLLNQL---K--FCQYYQFSSGGHSCHIK---HGQVFNEISRNFI 339 (345)
Q Consensus 273 ----~~~~~l~~i~-~Pvl~i~G~~D~~v~~~~~~~~~~~~---~--~~~~~~~~~~gH~~~~~---~~~~~~~~i~~fl 339 (345)
.-.-.+.+|+ +|+|.+.|++|.++|+..+..+.+.+ + +.+....+++||+..+. -++++...|.+||
T Consensus 324 l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl 403 (406)
T TIGR01849 324 FIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFI 403 (406)
T ss_pred EEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHH
Confidence 0122356788 99999999999999999999988874 4 34567777899997773 4678889999999
Q ss_pred Hhh
Q psy4974 340 LEE 342 (345)
Q Consensus 340 ~~~ 342 (345)
.++
T Consensus 404 ~~~ 406 (406)
T TIGR01849 404 RRN 406 (406)
T ss_pred HhC
Confidence 763
No 90
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.55 E-value=1.7e-12 Score=119.52 Aligned_cols=208 Identities=13% Similarity=0.020 Sum_probs=125.5
Q ss_pred ceEEEEcCcCCCchhhH-----HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSF-----KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~-----~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
+|||+++.+... ...| +.++++|.++||+|+.+|+++ -+.. ...+ +++++++.+
T Consensus 216 ~PLLIVPp~INK-~YIlDL~P~~SlVr~lv~qG~~VflIsW~n-------------P~~~---~r~~----~ldDYv~~i 274 (560)
T TIGR01839 216 RPLLVVPPQINK-FYIFDLSPEKSFVQYCLKNQLQVFIISWRN-------------PDKA---HREW----GLSTYVDAL 274 (560)
T ss_pred CcEEEechhhhh-hheeecCCcchHHHHHHHcCCeEEEEeCCC-------------CChh---hcCC----CHHHHHHHH
Confidence 699999999755 3555 578999999999999999988 6555 2334 445555555
Q ss_pred HHHHHHh----CCccEEEEEeChhHHHHHH----HHHhCCc-ccceeeEeccCCCCCchh-HH------HH---H-HhHh
Q psy4974 169 YELLKLL----GVCKVSLFGWCDGGHLSFV----FSMKYPH-MVHKLVIWGTKSFLTIDN-VR------VF---E-GMRR 228 (345)
Q Consensus 169 ~~~l~~~----~~~~i~lvGhS~Gg~ia~~----~a~~~p~-~v~~lvl~~~~~~~~~~~-~~------~~---~-~~~~ 228 (345)
.+.++.+ +.+++.++|||+||.++.. +++++++ +|++++++.+...+.... .. .. + .+..
T Consensus 275 ~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~ 354 (560)
T TIGR01839 275 KEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQ 354 (560)
T ss_pred HHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHh
Confidence 5544443 6679999999999999886 7788885 799999998876654211 00 01 1 1111
Q ss_pred ccCCChhhHHHHHHHcccCCc--------------hhhhhHHHH-----------HHHHHHHHHhhCc--------hhhh
Q psy4974 229 LSNWSPMARSEVLKAYDNDVN--------------YITGIFNQY-----------VDMVNLIFKSYGR--------NVYQ 275 (345)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~-----------~~~~~~~~~~~~~--------~~~~ 275 (345)
..............++..... -.......| ...+..++..... ..-.
T Consensus 355 ~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~G~~ 434 (560)
T TIGR01839 355 AGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSNPLTRPDALEVCGTP 434 (560)
T ss_pred cCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcCCCCCCCCEEECCEE
Confidence 111111111111111111100 000001111 1111222211110 0112
Q ss_pred ccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC-CcEEEEeCCCCCcc
Q psy4974 276 ELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK-FCQYYQFSSGGHSC 323 (345)
Q Consensus 276 ~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~gH~~ 323 (345)
-.+.+|+||++++.|.+|.++|++.+..+.+.+. +.+++.. .+||..
T Consensus 435 idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~-~gGHIg 482 (560)
T TIGR01839 435 IDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLS-NSGHIQ 482 (560)
T ss_pred echhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEec-CCCccc
Confidence 3467899999999999999999999999998886 4566555 488963
No 91
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.53 E-value=1.6e-12 Score=109.64 Aligned_cols=180 Identities=15% Similarity=0.162 Sum_probs=128.4
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC-C--CCCC----ccchHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG-R--SFVP----FQYIEEDVD 166 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~-~--~~~~----~~~~~~~~~ 166 (345)
|.||++|++.|- ....+.+++.|+..||.|+++|+-++ .|.+.... . .... .....+...
T Consensus 28 P~VIv~hei~Gl-~~~i~~~a~rlA~~Gy~v~~Pdl~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (236)
T COG0412 28 PGVIVLHEIFGL-NPHIRDVARRLAKAGYVVLAPDLYGR------------QGDPTDIEDEPAELETGLVERVDPAEVLA 94 (236)
T ss_pred CEEEEEecccCC-chHHHHHHHHHHhCCcEEEechhhcc------------CCCCCcccccHHHHhhhhhccCCHHHHHH
Confidence 899999999998 48999999999999999999998661 22221111 0 0000 011234455
Q ss_pred HHHHHHHHh---C---CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHH
Q psy4974 167 IAYELLKLL---G---VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEV 240 (345)
Q Consensus 167 ~~~~~l~~~---~---~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
++.+.++.+ . .++|.++|+||||.+++.++.+.| .+++.+..-+......
T Consensus 95 d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~----------------------- 150 (236)
T COG0412 95 DIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD----------------------- 150 (236)
T ss_pred HHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc-----------------------
Confidence 555554444 3 457999999999999999999887 6888888877544210
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----CcEEEEe
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----FCQYYQF 316 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~~~~~~~ 316 (345)
.....++++|+|+.+|+.|..+|......+.+.+. ..++.++
T Consensus 151 ----------------------------------~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y 196 (236)
T COG0412 151 ----------------------------------TADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIY 196 (236)
T ss_pred ----------------------------------ccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEe
Confidence 11144689999999999999999887777776663 4688999
Q ss_pred CCCCCcccccC-----------hHHHHHHHHHHHHhhcc
Q psy4974 317 SSGGHSCHIKH-----------GQVFNEISRNFILEENK 344 (345)
Q Consensus 317 ~~~gH~~~~~~-----------~~~~~~~i~~fl~~~~k 344 (345)
+++.|.++-+. .+.-.+.+.+||++...
T Consensus 197 ~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 197 PGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred CCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 99989877432 13456778888887653
No 92
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.53 E-value=9.5e-14 Score=110.84 Aligned_cols=155 Identities=14% Similarity=0.057 Sum_probs=103.5
Q ss_pred EEEEcCcCCCchhhHHHHH-HhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHH
Q psy4974 96 LFFTYGVLGEIRNSFKKQL-TAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKL 174 (345)
Q Consensus 96 vv~lHG~~~~~~~~~~~~~-~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~ 174 (345)
|+++||+++++...|.... +.|... ++|-.+|+-. | ..+++.+.+.+.+..
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~~-------------------P--------~~~~W~~~l~~~i~~ 52 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWDN-------------------P--------DLDEWVQALDQAIDA 52 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--TS-----------------------------HHHHHHHHHHCCHC
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccCC-------------------C--------CHHHHHHHHHHHHhh
Confidence 6899999999767787755 567666 7777665422 1 466677777777766
Q ss_pred hCCccEEEEEeChhHHHHHHHH-HhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhh
Q psy4974 175 LGVCKVSLFGWCDGGHLSFVFS-MKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITG 253 (345)
Q Consensus 175 ~~~~~i~lvGhS~Gg~ia~~~a-~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (345)
.. +++++||||+|+..++.++ .....+|++++|++|+....... ......
T Consensus 53 ~~-~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~-----~~~~~~----------------------- 103 (171)
T PF06821_consen 53 ID-EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEP-----FPPELD----------------------- 103 (171)
T ss_dssp -T-TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHC-----CTCGGC-----------------------
T ss_pred cC-CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccc-----hhhhcc-----------------------
Confidence 54 5799999999999999999 66778999999999975420000 000000
Q ss_pred hHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCccccc
Q psy4974 254 IFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIK 326 (345)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 326 (345)
.. .......+.+|.++|.+++|+++|.+.++.+++.+ +++++.++++||+...+
T Consensus 104 -----------------~f-~~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 104 -----------------GF-TPLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL-GAELIILGGGGHFNAAS 157 (171)
T ss_dssp -----------------CC-TTSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH-T-EEEEETS-TTSSGGG
T ss_pred -----------------cc-ccCcccccCCCeEEEEcCCCCccCHHHHHHHHHHc-CCCeEECCCCCCccccc
Confidence 00 00112234567799999999999999999999998 89999999999987654
No 93
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.52 E-value=1.2e-12 Score=105.55 Aligned_cols=177 Identities=16% Similarity=0.152 Sum_probs=110.1
Q ss_pred EEEEcCcCCCchhhHH--HHHHhhCCCC--eEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 96 LFFTYGVLGEIRNSFK--KQLTAFDPKL--FTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 96 vv~lHG~~~~~~~~~~--~~~~~L~~~G--~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
|+++||+.+++ .+.. .+.+.+++.+ ..+.++|++. ...+..+.+.++
T Consensus 2 ilYlHGF~Ssp-~S~Ka~~l~~~~~~~~~~~~~~~p~l~~----------------------------~p~~a~~~l~~~ 52 (187)
T PF05728_consen 2 ILYLHGFNSSP-QSFKAQALKQYFAEHGPDIQYPCPDLPP----------------------------FPEEAIAQLEQL 52 (187)
T ss_pred eEEecCCCCCC-CCHHHHHHHHHHHHhCCCceEECCCCCc----------------------------CHHHHHHHHHHH
Confidence 79999999985 4443 3445565543 5677777666 334456777888
Q ss_pred HHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchh
Q psy4974 172 LKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYI 251 (345)
Q Consensus 172 l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (345)
++....+.+.|+|.||||+.|..+|.+++ +++ |+++|+..+...... .++......
T Consensus 53 i~~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~---------------------~iG~~~~~~ 108 (187)
T PF05728_consen 53 IEELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQD---------------------YIGEQTNPY 108 (187)
T ss_pred HHhCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHH---------------------hhCccccCC
Confidence 88887777999999999999999999885 445 899997764322111 111110000
Q ss_pred -hhhH---HHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccC
Q psy4974 252 -TGIF---NQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKH 327 (345)
Q Consensus 252 -~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 327 (345)
...+ ......+.. . ......-..++++++++.|.+++.+.+ .+.+.++..++.+|++|-+. +
T Consensus 109 ~~e~~~~~~~~~~~l~~----l-----~~~~~~~~~~~lvll~~~DEvLd~~~a---~~~~~~~~~~i~~ggdH~f~--~ 174 (187)
T PF05728_consen 109 TGESYELTEEHIEELKA----L-----EVPYPTNPERYLVLLQTGDEVLDYREA---VAKYRGCAQIIEEGGDHSFQ--D 174 (187)
T ss_pred CCccceechHhhhhcce----E-----eccccCCCccEEEEEecCCcccCHHHH---HHHhcCceEEEEeCCCCCCc--c
Confidence 0000 001111000 0 001123357999999999999997544 33344556667788999764 4
Q ss_pred hHHHHHHHHHHH
Q psy4974 328 GQVFNEISRNFI 339 (345)
Q Consensus 328 ~~~~~~~i~~fl 339 (345)
-++....|.+|+
T Consensus 175 f~~~l~~i~~f~ 186 (187)
T PF05728_consen 175 FEEYLPQIIAFL 186 (187)
T ss_pred HHHHHHHHHHhh
Confidence 567777888886
No 94
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.52 E-value=1.6e-13 Score=124.00 Aligned_cols=110 Identities=13% Similarity=0.057 Sum_probs=81.5
Q ss_pred EcCCCCceEEEEcCcCCCc-hhhHHH-HHHhhC--CCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHH
Q psy4974 88 KYGSGAQVLFFTYGVLGEI-RNSFKK-QLTAFD--PKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEE 163 (345)
Q Consensus 88 ~~g~~~p~vv~lHG~~~~~-~~~~~~-~~~~L~--~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~ 163 (345)
......|++|++||++++. ...|.. ++..|. +..++|+++|++| +|.+..+... .....
T Consensus 36 ~Fn~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g-------------~g~s~y~~a~----~~t~~ 98 (442)
T TIGR03230 36 NFNHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLS-------------RAQQHYPTSA----AYTKL 98 (442)
T ss_pred CcCCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCC-------------cCCCCCcccc----ccHHH
Confidence 3444568999999998753 256775 555553 2249999999999 9987544321 12344
Q ss_pred HHHHHHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 164 DVDIAYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 164 ~~~~~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.++++.++++.+ +.++++|+||||||.+|..++...|++|.++++++|+..
T Consensus 99 vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 99 VGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred HHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 455566665543 367999999999999999999999999999999999754
No 95
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.52 E-value=5.5e-14 Score=121.59 Aligned_cols=117 Identities=10% Similarity=0.028 Sum_probs=82.7
Q ss_pred CceEEEEEcCCCCceEEEEcCcCCCchhhHHH-HHH-hhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCc
Q psy4974 81 GCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKK-QLT-AFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPF 158 (345)
Q Consensus 81 g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~-~~~-~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~ 158 (345)
+..+.+.......|++|++||++++....|.. +.. .|...+++|+++|+++ ++.+..+. ..
T Consensus 24 ~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~-------------~~~~~y~~----a~ 86 (275)
T cd00707 24 PSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGR-------------GANPNYPQ----AV 86 (275)
T ss_pred hhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECcc-------------ccccChHH----HH
Confidence 45666666777778999999999884256654 344 3444569999999999 73322111 11
Q ss_pred cchHHHHHHHHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 159 QYIEEDVDIAYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 159 ~~~~~~~~~~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.......+++.++++.+ +.++++++||||||.+|..++.++|++|+++++++|+..
T Consensus 87 ~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 87 NNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 12333344444444443 346899999999999999999999999999999998755
No 96
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.47 E-value=6.9e-13 Score=106.40 Aligned_cols=241 Identities=12% Similarity=0.106 Sum_probs=141.0
Q ss_pred EcCceEEEEEcCC-CC-ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC
Q psy4974 79 IKGCDIRFIKYGS-GA-QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV 156 (345)
Q Consensus 79 ~~g~~l~~~~~g~-~~-p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~ 156 (345)
.||+.+....+.. ++ +-.+++-|..+-.+..|+.++..++..||.|+.+|+|| .|.|.+....-
T Consensus 13 ~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG-------------~g~S~p~~~~~- 78 (281)
T COG4757 13 PDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRG-------------IGQSRPASLSG- 78 (281)
T ss_pred CCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEeccc-------------ccCCCcccccc-
Confidence 3777777665532 22 33555555555546889999999999999999999999 99997654321
Q ss_pred CccchHHHHH-HHHHHHH----HhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhc--
Q psy4974 157 PFQYIEEDVD-IAYELLK----LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRL-- 229 (345)
Q Consensus 157 ~~~~~~~~~~-~~~~~l~----~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-- 229 (345)
....+.+++. |+.+.++ .+.-.+...+|||+||.+.-.+. +++ +..+....+........... .+.+...
T Consensus 79 ~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m~~-~~~l~~~~l 155 (281)
T COG4757 79 SQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWMGL-RERLGAVLL 155 (281)
T ss_pred CccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccceeeEeccccccccchhh-hhcccceee
Confidence 1113333322 3333333 33445899999999998765554 344 55555555554442221111 0111111
Q ss_pred --------cCCChhhHHHHHHHcccCCchhhh---hHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCCh
Q psy4974 230 --------SNWSPMARSEVLKAYDNDVNYITG---IFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVST 298 (345)
Q Consensus 230 --------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~ 298 (345)
..|...+...+ ++...+.... .|..|...-...+.......+.+....+++|+.++...+|+.+|+
T Consensus 156 ~~lv~p~lt~w~g~~p~~l---~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~ 232 (281)
T COG4757 156 WNLVGPPLTFWKGYMPKDL---LGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPP 232 (281)
T ss_pred ccccccchhhccccCcHhh---cCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCH
Confidence 11111111111 1111112222 233333222222222222234556677899999999999999999
Q ss_pred HHHHHHHhhcCCcE--EEEeCC----CCCcccccCh-HHHHHHHHHHH
Q psy4974 299 QQVQSLLNQLKFCQ--YYQFSS----GGHSCHIKHG-QVFNEISRNFI 339 (345)
Q Consensus 299 ~~~~~~~~~~~~~~--~~~~~~----~gH~~~~~~~-~~~~~~i~~fl 339 (345)
...+.+.+..+++. ...++. -||+-..-++ |.+.+.+.+|+
T Consensus 233 As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 233 ASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 99999999887764 444443 4999887776 77888888776
No 97
>PRK10115 protease 2; Provisional
Probab=99.46 E-value=3.7e-12 Score=123.45 Aligned_cols=211 Identities=17% Similarity=0.153 Sum_probs=130.9
Q ss_pred EcCceEEE-EEc------CCCCceEEEEcCcCCCc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 79 IKGCDIRF-IKY------GSGAQVLFFTYGVLGEI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 79 ~~g~~l~~-~~~------g~~~p~vv~lHG~~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
.||.+|.+ ..+ ....|+||++||+.+.+ ...|......|.++||.|+.++.|| ++++|..-.
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RG----------s~g~G~~w~ 493 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRG----------GGELGQQWY 493 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCC----------CCccCHHHH
Confidence 48888775 222 12348999999988763 2446666678888999999999999 444554311
Q ss_pred CC--CCCCCccchHHHHHHHHHHHHHh--CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh
Q psy4974 151 KG--RSFVPFQYIEEDVDIAYELLKLL--GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM 226 (345)
Q Consensus 151 ~~--~~~~~~~~~~~~~~~~~~~l~~~--~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 226 (345)
.. ... ...++++.++.+..+++.- ..+++.+.|.|.||+++..++.++|++++++|+..|..........
T Consensus 494 ~~g~~~~-k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~----- 567 (686)
T PRK10115 494 EDGKFLK-KKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLD----- 567 (686)
T ss_pred Hhhhhhc-CCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhccc-----
Confidence 11 111 1235556666565555542 2358999999999999999999999999999999887653211000
Q ss_pred HhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCC-EEEEEeCCCCCCChHHHHHHH
Q psy4974 227 RRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVP-VLVFHSADDVMVSTQQVQSLL 305 (345)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vl~i~G~~D~~v~~~~~~~~~ 305 (345)
..+.. ..... ..++.. .. ......+..+ .+...+.+++.| +|+++|.+|..||+..+.++.
T Consensus 568 ~~~p~----~~~~~-~e~G~p--~~--------~~~~~~l~~~---SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~ 629 (686)
T PRK10115 568 ESIPL----TTGEF-EEWGNP--QD--------PQYYEYMKSY---SPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWV 629 (686)
T ss_pred CCCCC----ChhHH-HHhCCC--CC--------HHHHHHHHHc---CchhccCccCCCceeEEecCCCCCcCchHHHHHH
Confidence 00000 00011 111111 00 0011111111 123445667889 567799999999999888888
Q ss_pred hhcC----CcEEEEe---CCCCCcc
Q psy4974 306 NQLK----FCQYYQF---SSGGHSC 323 (345)
Q Consensus 306 ~~~~----~~~~~~~---~~~gH~~ 323 (345)
..+. +.+.+++ +++||..
T Consensus 630 a~Lr~~~~~~~~vl~~~~~~~GHg~ 654 (686)
T PRK10115 630 AKLRELKTDDHLLLLCTDMDSGHGG 654 (686)
T ss_pred HHHHhcCCCCceEEEEecCCCCCCC
Confidence 7763 4566777 8999984
No 98
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.46 E-value=1.2e-11 Score=93.54 Aligned_cols=189 Identities=14% Similarity=0.106 Sum_probs=129.0
Q ss_pred CCCCceEEEEcCcCCCch-hhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 90 GSGAQVLFFTYGVLGEIR-NSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 90 g~~~p~vv~lHG~~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
|+..-+||+-||.+++.. ......+..|+..|+.|..+++|. +..++.|...+++.. -..-.++...+
T Consensus 11 g~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpY--------ma~Rrtg~rkPp~~~---~t~~~~~~~~~ 79 (213)
T COG3571 11 GPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPY--------MAARRTGRRKPPPGS---GTLNPEYIVAI 79 (213)
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecch--------hhhccccCCCCcCcc---ccCCHHHHHHH
Confidence 333348899999988731 456678889999999999999876 333334533333321 11234456666
Q ss_pred HHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCC
Q psy4974 169 YELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDV 248 (345)
Q Consensus 169 ~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (345)
.++...+.-.+.++-|+||||.++.+++...-..|+++++++=+...+....+
T Consensus 80 aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~--------------------------- 132 (213)
T COG3571 80 AQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQ--------------------------- 132 (213)
T ss_pred HHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCccc---------------------------
Confidence 67777776669999999999999999988765569999999865443321100
Q ss_pred chhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccc---
Q psy4974 249 NYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHI--- 325 (345)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~--- 325 (345)
.-.+.+..+++|+|+++|+.|++-..+...... ..+..++++++++.|..--
T Consensus 133 ------------------------~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y~-ls~~iev~wl~~adHDLkp~k~ 187 (213)
T COG3571 133 ------------------------LRTEHLTGLKTPTLITQGTRDEFGTRDEVAGYA-LSDPIEVVWLEDADHDLKPRKL 187 (213)
T ss_pred ------------------------chhhhccCCCCCeEEeecccccccCHHHHHhhh-cCCceEEEEeccCccccccccc
Confidence 004457788999999999999987755442222 2256799999999997422
Q ss_pred -------cChHHHHHHHHHHHHh
Q psy4974 326 -------KHGQVFNEISRNFILE 341 (345)
Q Consensus 326 -------~~~~~~~~~i~~fl~~ 341 (345)
++-...++.|..|+..
T Consensus 188 vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 188 VSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred cccccHHHHHHHHHHHHHHHHhh
Confidence 2334566777777764
No 99
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.46 E-value=6.4e-12 Score=101.80 Aligned_cols=223 Identities=13% Similarity=0.177 Sum_probs=114.9
Q ss_pred eeeEEE-cCceEEEEEcCC------CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCC-
Q psy4974 74 EGFFSI-KGCDIRFIKYGS------GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGY- 145 (345)
Q Consensus 74 ~~~~~~-~g~~l~~~~~g~------~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~- 145 (345)
.+.+.+ +|..|+..+..+ ..++||+-+|++-.. ..|..++.+|+.+||+|+.+|.-. |
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrm-dh~agLA~YL~~NGFhViRyDsl~-------------Hv 69 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRM-DHFAGLAEYLSANGFHVIRYDSLN-------------HV 69 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGG-GGGHHHHHHHHTTT--EEEE---B---------------
T ss_pred cceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHH-HHHHHHHHHHhhCCeEEEeccccc-------------cc
Confidence 456666 778888766532 236899999998885 999999999999999999999776 5
Q ss_pred CCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHH
Q psy4974 146 GQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEG 225 (345)
Q Consensus 146 G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 225 (345)
|.|+..-..| ++....+....+.++++..|..++.|+.-|+.|-+|+..|.+. .+.-+|..-+.........+.+..
T Consensus 70 GlSsG~I~ef-tms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~TLe~al~~ 146 (294)
T PF02273_consen 70 GLSSGDINEF-TMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRDTLEKALGY 146 (294)
T ss_dssp ------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHHHHHHHSS
T ss_pred cCCCCChhhc-chHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHHHHHHhcc
Confidence 8898877777 6555556666677778888889999999999999999999853 366666655544432221111100
Q ss_pred hHhccCCChhhHHHHHHHcccCCchhhh--hHHHHHH-HHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHH
Q psy4974 226 MRRLSNWSPMARSEVLKAYDNDVNYITG--IFNQYVD-MVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQ 302 (345)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~ 302 (345)
.-+..+.... +...++..- ..+.+.. .+...+. ........++.+.+|++.+++++|.+|......
T Consensus 147 -Dyl~~~i~~l--------p~dldfeGh~l~~~vFv~dc~e~~w~--~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~ 215 (294)
T PF02273_consen 147 -DYLQLPIEQL--------PEDLDFEGHNLGAEVFVTDCFEHGWD--DLDSTINDMKRLSIPFIAFTANDDDWVKQSEVE 215 (294)
T ss_dssp --GGGS-GGG----------SEEEETTEEEEHHHHHHHHHHTT-S--SHHHHHHHHTT--S-EEEEEETT-TTS-HHHHH
T ss_pred -chhhcchhhC--------CCcccccccccchHHHHHHHHHcCCc--cchhHHHHHhhCCCCEEEEEeCCCccccHHHHH
Confidence 0000000000 000000000 0001111 1111110 011124456778999999999999999999888
Q ss_pred HHHhhcC--CcEEEEeCCCCCccc
Q psy4974 303 SLLNQLK--FCQYYQFSSGGHSCH 324 (345)
Q Consensus 303 ~~~~~~~--~~~~~~~~~~gH~~~ 324 (345)
++...+. .++++.++|++|..-
T Consensus 216 ~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 216 ELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp HHHTT-TT--EEEEEETT-SS-TT
T ss_pred HHHHhcCCCceeEEEecCccchhh
Confidence 8888663 578899999999765
No 100
>KOG2624|consensus
Probab=99.44 E-value=6.4e-12 Score=112.28 Aligned_cols=265 Identities=13% Similarity=0.070 Sum_probs=153.3
Q ss_pred CCcceeeeEEE-cCceEEEEEc--C-CCCceEEEEcCcCCCchhhHHH------HHHhhCCCCeEEEEeCCCCchhhhcc
Q psy4974 69 QDVFTEGFFSI-KGCDIRFIKY--G-SGAQVLFFTYGVLGEIRNSFKK------QLTAFDPKLFTSIFWDPPGNVVLYLL 138 (345)
Q Consensus 69 ~~~~~~~~~~~-~g~~l~~~~~--g-~~~p~vv~lHG~~~~~~~~~~~------~~~~L~~~G~~vi~~D~~G~~~~~~~ 138 (345)
+.+.+++.++. ||+-+..... + ..+|+|++.||+.+++ ..|.. ++-.|+++||+|+.-+.|| +.|.+
T Consensus 45 gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS-~~Wv~n~p~~sLaf~LadaGYDVWLgN~RG--n~ySr 121 (403)
T KOG2624|consen 45 GYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASS-SSWVLNGPEQSLAFLLADAGYDVWLGNNRG--NTYSR 121 (403)
T ss_pred CCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeecccccc-ccceecCccccHHHHHHHcCCceeeecCcC--cccch
Confidence 45555666655 8886665543 2 4458999999999996 88843 4556889999999999999 33333
Q ss_pred CCccCCCCCC-CCCCCCCCCccchHHH-----HHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCc---ccceeeEe
Q psy4974 139 GKTCSGYGQS-LPKGRSFVPFQYIEED-----VDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH---MVHKLVIW 209 (345)
Q Consensus 139 g~~~~~~G~s-~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~ 209 (345)
.+.. ...+ ...-..| ++.++ .+.+.-+++.-+.++++.+|||.|+.....++...|+ +|+.++++
T Consensus 122 ~h~~--l~~~~~~~FW~F----S~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aL 195 (403)
T KOG2624|consen 122 KHKK--LSPSSDKEFWDF----SWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIAL 195 (403)
T ss_pred hhcc--cCCcCCcceeec----chhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeee
Confidence 3320 1111 1112223 34443 3334444555577899999999999999998888765 79999999
Q ss_pred ccCCCCCch---hHHHHHH-------hHhccCCCh-----hhHHHHHHHcccCCchhhh---------------hHHHH-
Q psy4974 210 GTKSFLTID---NVRVFEG-------MRRLSNWSP-----MARSEVLKAYDNDVNYITG---------------IFNQY- 258 (345)
Q Consensus 210 ~~~~~~~~~---~~~~~~~-------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~---------------~~~~~- 258 (345)
+|+...... ....... +..+..... ...+.+............. .+...
T Consensus 196 AP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~ 275 (403)
T KOG2624|consen 196 APAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTL 275 (403)
T ss_pred cchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcc
Confidence 998854311 1111100 111111000 0000011111110000000 00000
Q ss_pred -------------HHHHHHHHH--------------------hhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHH
Q psy4974 259 -------------VDMVNLIFK--------------------SYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLL 305 (345)
Q Consensus 259 -------------~~~~~~~~~--------------------~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~ 305 (345)
.+.+..+.. ......+...+.++++|+.+.+|++|.++.++....+.
T Consensus 276 ~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~ 355 (403)
T KOG2624|consen 276 LPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILL 355 (403)
T ss_pred cchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHH
Confidence 011111110 00111233446678999999999999999999999888
Q ss_pred hhcCCcEEEE---eCCCCCcccc---cChHHHHHHHHHHHHhh
Q psy4974 306 NQLKFCQYYQ---FSSGGHSCHI---KHGQVFNEISRNFILEE 342 (345)
Q Consensus 306 ~~~~~~~~~~---~~~~gH~~~~---~~~~~~~~~i~~fl~~~ 342 (345)
...+++.... +++=.|.-++ +-++++.+.|.+.++..
T Consensus 356 ~~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~ 398 (403)
T KOG2624|consen 356 LVLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLF 398 (403)
T ss_pred HhcccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhh
Confidence 8877654422 6777886444 45889999999888754
No 101
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.44 E-value=1.7e-12 Score=106.72 Aligned_cols=239 Identities=13% Similarity=0.042 Sum_probs=135.3
Q ss_pred eEEEcCceEEEEE----cC-CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 76 FFSIKGCDIRFIK----YG-SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 76 ~~~~~g~~l~~~~----~g-~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
+...+|.+|.-.. .+ ...|.||-.||.+++. ..|..++. ++..||.|+.+|.||++.... -..++..|.+.+
T Consensus 61 f~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~-g~~~~~l~-wa~~Gyavf~MdvRGQg~~~~-dt~~~p~~~s~p 137 (321)
T COG3458 61 FTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRG-GEWHDMLH-WAVAGYAVFVMDVRGQGSSSQ-DTADPPGGPSDP 137 (321)
T ss_pred EeccCCceEEEEEEeecccCCccceEEEEeeccCCC-CCcccccc-ccccceeEEEEecccCCCccc-cCCCCCCCCcCC
Confidence 3344666666332 22 2338999999999995 78877664 556689999999999322211 000011111100
Q ss_pred -------C--CCCCCCccchHHHHHHHHHH--HHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh
Q psy4974 151 -------K--GRSFVPFQYIEEDVDIAYEL--LKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN 219 (345)
Q Consensus 151 -------~--~~~~~~~~~~~~~~~~~~~~--l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 219 (345)
. ...|.-..-+.+.++.+..+ +.....++|.+.|.|.||.+++.+++..| +|+++++.-|...--+..
T Consensus 138 G~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r~ 216 (321)
T COG3458 138 GFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPRA 216 (321)
T ss_pred ceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchhh
Confidence 0 01110011122223333222 22234468999999999999999988775 799998887754311100
Q ss_pred HHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH
Q psy4974 220 VRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ 299 (345)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~ 299 (345)
+..........+...+.... ..-...+......+..+...++++|+|+..|-.|+++|+.
T Consensus 217 ---------i~~~~~~~ydei~~y~k~h~-----------~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPs 276 (321)
T COG3458 217 ---------IELATEGPYDEIQTYFKRHD-----------PKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPS 276 (321)
T ss_pred ---------eeecccCcHHHHHHHHHhcC-----------chHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCCh
Confidence 00001111112222222210 0011222222333445556788999999999999999999
Q ss_pred HHHHHHhhcCC-cEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 300 QVQSLLNQLKF-CQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 300 ~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
..-...+.++. .++.+++.-+|.-. |.-..+.+..|++.
T Consensus 277 tqFA~yN~l~~~K~i~iy~~~aHe~~---p~~~~~~~~~~l~~ 316 (321)
T COG3458 277 TQFAAYNALTTSKTIEIYPYFAHEGG---PGFQSRQQVHFLKI 316 (321)
T ss_pred hhHHHhhcccCCceEEEeeccccccC---cchhHHHHHHHHHh
Confidence 99999998874 56677776677544 44555556667654
No 102
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.42 E-value=5.4e-12 Score=121.09 Aligned_cols=111 Identities=18% Similarity=0.187 Sum_probs=86.2
Q ss_pred eeeEEEcCceEEEEEcCCCC----------ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGA----------QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCS 143 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~----------p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~ 143 (345)
..++..++..+.|...+.+. |+||++||++++ ...|..+++.|.++||+|+++|+||
T Consensus 420 ~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~-~~~~~~lA~~La~~Gy~VIaiDlpG------------ 486 (792)
T TIGR03502 420 VLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGA-KENALAFAGTLAAAGVATIAIDHPL------------ 486 (792)
T ss_pred eEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCC-HHHHHHHHHHHHhCCcEEEEeCCCC------------
Confidence 35556688888777755442 489999999999 4999999999998899999999999
Q ss_pred CCCCCCCC---------CC---CCCC-------ccchHHHHHHHHHHHHHhC----------------CccEEEEEeChh
Q psy4974 144 GYGQSLPK---------GR---SFVP-------FQYIEEDVDIAYELLKLLG----------------VCKVSLFGWCDG 188 (345)
Q Consensus 144 ~~G~s~~~---------~~---~~~~-------~~~~~~~~~~~~~~l~~~~----------------~~~i~lvGhS~G 188 (345)
||.|... .. .|.. .+.+.+.+.|+..+...++ ..+++++|||||
T Consensus 487 -HG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLG 565 (792)
T TIGR03502 487 -HGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLG 565 (792)
T ss_pred -CCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHH
Confidence 8888432 11 1101 1467888888888877765 248999999999
Q ss_pred HHHHHHHHHh
Q psy4974 189 GHLSFVFSMK 198 (345)
Q Consensus 189 g~ia~~~a~~ 198 (345)
|.+++.++..
T Consensus 566 giig~~~~~~ 575 (792)
T TIGR03502 566 GIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 103
>KOG2565|consensus
Probab=99.41 E-value=2.4e-11 Score=104.11 Aligned_cols=123 Identities=22% Similarity=0.215 Sum_probs=98.6
Q ss_pred eeEEEcCceEEEEEcCCC-------CceEEEEcCcCCCchhhHHHHHHhhCCC---C------eEEEEeCCCCchhhhcc
Q psy4974 75 GFFSIKGCDIRFIKYGSG-------AQVLFFTYGVLGEIRNSFKKQLTAFDPK---L------FTSIFWDPPGNVVLYLL 138 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~~-------~p~vv~lHG~~~~~~~~~~~~~~~L~~~---G------~~vi~~D~~G~~~~~~~ 138 (345)
-..++.|.+||+...... ..|++++|||+|+. +.|..+++.|.+. | |.|+++.+||
T Consensus 127 ykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv-~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPG------- 198 (469)
T KOG2565|consen 127 YKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSV-REFYKFIPLLTDPKRHGNESDYAFEVIAPSLPG------- 198 (469)
T ss_pred hhhhhcceeEEEEEecCCccccCCcccceEEecCCCchH-HHHHhhhhhhcCccccCCccceeEEEeccCCCC-------
Confidence 345678999998865321 14899999999995 8888888888654 3 8999999999
Q ss_pred CCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 139 GKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 139 g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
+|.|+.+... .+ ...+.|.-+..++-.+|.+++.|-|-.||+.|+..+|..+|+.|.++-+--+...
T Consensus 199 ------ygwSd~~sk~--GF-n~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~~ 265 (469)
T KOG2565|consen 199 ------YGWSDAPSKT--GF-NAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFVN 265 (469)
T ss_pred ------cccCcCCccC--Cc-cHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccccC
Confidence 9999877542 22 4556677778888899999999999999999999999999999998876555433
No 104
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.41 E-value=3.5e-12 Score=108.64 Aligned_cols=224 Identities=16% Similarity=0.144 Sum_probs=83.5
Q ss_pred ceEEEEcCcCCCc--hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEI--RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 94 p~vv~lHG~~~~~--~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
..||||.|++..- -.....+++.|.+.||.|+-+.++. +-.|+|.+ +++.+++++.++
T Consensus 34 ~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsS---------Sy~G~G~~-----------SL~~D~~eI~~~ 93 (303)
T PF08538_consen 34 NALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSS---------SYSGWGTS-----------SLDRDVEEIAQL 93 (303)
T ss_dssp SEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GG---------GBTTS-S-------------HHHHHHHHHHH
T ss_pred cEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecC---------ccCCcCcc-----------hhhhHHHHHHHH
Confidence 4899999988752 2446778899988889999998765 11114433 677777777766
Q ss_pred HHH---h-----CCccEEEEEeChhHHHHHHHHHhCC-----cccceeeEeccCCCCCchhHH-----HHHHh----Hhc
Q psy4974 172 LKL---L-----GVCKVSLFGWCDGGHLSFVFSMKYP-----HMVHKLVIWGTKSFLTIDNVR-----VFEGM----RRL 229 (345)
Q Consensus 172 l~~---~-----~~~~i~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~-----~~~~~----~~~ 229 (345)
++. . +.++|+|+|||.|+.-+++|+.... ..|+++||-+|.......... .+..+ +.+
T Consensus 94 v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~ 173 (303)
T PF08538_consen 94 VEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKEL 173 (303)
T ss_dssp HHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHH
T ss_pred HHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHH
Confidence 654 3 3568999999999999999987652 569999999998764322211 11111 100
Q ss_pred ---cCCChhhHHHHHHHcccCCchhhhhHHHHHH-----HHHHHH-HhhCchhhhccCCCCCCCEEEEEeCCCCCCChH-
Q psy4974 230 ---SNWSPMARSEVLKAYDNDVNYITGIFNQYVD-----MVNLIF-KSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ- 299 (345)
Q Consensus 230 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~- 299 (345)
.+....+..........+ .+-...+|.. .-..++ .......+...+..+.+|+|++.+.+|..||..
T Consensus 174 i~~g~~~~~lp~~~~~~~~~~---~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~v 250 (303)
T PF08538_consen 174 IAEGKGDEILPREFTPLVFYD---TPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWV 250 (303)
T ss_dssp HHCT-TT-GG----GGTTT-S---S---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT------
T ss_pred HHcCCCCceeeccccccccCC---CcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccc
Confidence 000000000000000000 0000011110 000111 112223445667788899999999999999864
Q ss_pred HHHHHHhhcCC--------cEEEEeCCCCCcccccCh----HHHHHHHHHHHH
Q psy4974 300 QVQSLLNQLKF--------CQYYQFSSGGHSCHIKHG----QVFNEISRNFIL 340 (345)
Q Consensus 300 ~~~~~~~~~~~--------~~~~~~~~~gH~~~~~~~----~~~~~~i~~fl~ 340 (345)
..+.+.+++.. ..-.++||++|.+--+.. +.+.+.+..||+
T Consensus 251 dk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 251 DKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -----------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 22334443321 124589999999865432 357788888874
No 105
>KOG3043|consensus
Probab=99.41 E-value=1.1e-11 Score=99.22 Aligned_cols=196 Identities=19% Similarity=0.147 Sum_probs=134.1
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC-CC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP-KG 152 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~-~~ 152 (345)
....+++|.+-++.-..+.+..||+|--+.|.....-+..+..++.+||.|+.+|+-. | --.+.. ..
T Consensus 20 g~~~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~-------G-----dp~~~~~~~ 87 (242)
T KOG3043|consen 20 GREEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFR-------G-----DPWSPSLQK 87 (242)
T ss_pred CceEeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhc-------C-----CCCCCCCCh
Confidence 3455677777776655555557888888777754557888999999999999999855 1 101110 00
Q ss_pred -------CCCCCccchHHHHHHHHHHHHHhC-CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHH
Q psy4974 153 -------RSFVPFQYIEEDVDIAYELLKLLG-VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFE 224 (345)
Q Consensus 153 -------~~~~~~~~~~~~~~~~~~~l~~~~-~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 224 (345)
... +..........+..+++.-+ ..+|.++|+||||-++..+....| .+.+.+.+-|....
T Consensus 88 ~~~~~w~~~~-~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d--------- 156 (242)
T KOG3043|consen 88 SERPEWMKGH-SPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD--------- 156 (242)
T ss_pred hhhHHHHhcC-CcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC---------
Confidence 011 11122333445555566555 568999999999999998888877 67777777664331
Q ss_pred HhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHH
Q psy4974 225 GMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSL 304 (345)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~ 304 (345)
......+++|++++.|+.|.++|++....+
T Consensus 157 --------------------------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ 186 (242)
T KOG3043|consen 157 --------------------------------------------------SADIANVKAPILFLFAELDEDVPPKDVKAW 186 (242)
T ss_pred --------------------------------------------------hhHHhcCCCCEEEEeecccccCCHHHHHHH
Confidence 223456789999999999999999888887
Q ss_pred HhhcC-----CcEEEEeCCCCCcccc-----cCh------HHHHHHHHHHHHhh
Q psy4974 305 LNQLK-----FCQYYQFSSGGHSCHI-----KHG------QVFNEISRNFILEE 342 (345)
Q Consensus 305 ~~~~~-----~~~~~~~~~~gH~~~~-----~~~------~~~~~~i~~fl~~~ 342 (345)
.+.+. ..++.+|++.+|-++. +.| ++..+.+..||+..
T Consensus 187 ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 187 EEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred HHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 77764 2478999999997663 233 34556677777654
No 106
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.41 E-value=5e-12 Score=120.42 Aligned_cols=117 Identities=13% Similarity=0.118 Sum_probs=84.2
Q ss_pred cCceEEEEEc---CC-CCceEEEEcCcCCCch--hhH-HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 80 KGCDIRFIKY---GS-GAQVLFFTYGVLGEIR--NSF-KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 80 ~g~~l~~~~~---g~-~~p~vv~lHG~~~~~~--~~~-~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
+|.+|++..+ +. ..|+||++||++.+.. ..+ ......|.++||.|+++|+|| +|.|....
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG-------------~g~S~g~~ 71 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRG-------------RGASEGEF 71 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccc-------------cccCCCce
Confidence 6777875443 22 3379999999987631 112 224467888899999999999 99997553
Q ss_pred CCCCCccchHHHHHHHHHHHHHhC-----CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 153 RSFVPFQYIEEDVDIAYELLKLLG-----VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~~~-----~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
..+ . ...++|+.++++.+. ..++.++|||+||.+++.+|..+|+.++++|..++...
T Consensus 72 ~~~-~----~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 72 DLL-G----SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred Eec-C----cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 322 2 234555555555442 24899999999999999999999999999998887654
No 107
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.39 E-value=7.5e-12 Score=105.81 Aligned_cols=214 Identities=18% Similarity=0.140 Sum_probs=121.6
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhC-CCC--eEEEEeCCCCchhhhccCCccCCCCCCCCCC--CCCC-Cc-cchHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFD-PKL--FTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG--RSFV-PF-QYIEEDVD 166 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~-~~G--~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~--~~~~-~~-~~~~~~~~ 166 (345)
.|.||+||++++. ..+..++..+. +.| -.++.++.--.|.+.+.|.- ......|- -.|. .. .++...+.
T Consensus 12 tPTifihG~~gt~-~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~---~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 12 TPTIFIHGYGGTA-NSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKL---SKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp EEEEEE--TTGGC-CCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES------TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred CcEEEECCCCCCh-hHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeec---CCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 5899999999994 99999999996 654 34444444344466666665 22222111 0000 11 25666677
Q ss_pred HHHHHHHHh----CCccEEEEEeChhHHHHHHHHHhCCc-----ccceeeEeccCCCCCchhHHHHHHhHhccCCChhhH
Q psy4974 167 IAYELLKLL----GVCKVSLFGWCDGGHLSFVFSMKYPH-----MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMAR 237 (345)
Q Consensus 167 ~~~~~l~~~----~~~~i~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (345)
++..++..+ +++++.+|||||||..++.++..+.. .+.++|.++++............ ...+..-.+
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~-~~~~~~~gp--- 163 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQN-QNDLNKNGP--- 163 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TT-TT-CSTT-B---
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccch-hhhhcccCC---
Confidence 777666655 67899999999999999999887531 58999999986653211100000 000000000
Q ss_pred HHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeC------CCCCCChHHHHHHHhhcCC-
Q psy4974 238 SEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSA------DDVMVSTQQVQSLLNQLKF- 310 (345)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~------~D~~v~~~~~~~~~~~~~~- 310 (345)
.. ....+..+.... ...++ -++.||-|.|+ .|..||...+..+...+.+
T Consensus 164 ---------------~~---~~~~y~~l~~~~-----~~~~p-~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~ 219 (255)
T PF06028_consen 164 ---------------KS---MTPMYQDLLKNR-----RKNFP-KNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNR 219 (255)
T ss_dssp ---------------SS-----HHHHHHHHTH-----GGGST-TT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTT
T ss_pred ---------------cc---cCHHHHHHHHHH-----HhhCC-CCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcc
Confidence 00 011111111110 11122 25789999998 7899999988888877753
Q ss_pred ---cEEEEeCC--CCCcccccChHHHHHHHHHHHH
Q psy4974 311 ---CQYYQFSS--GGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 311 ---~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.+-.++.| +.|.-..|++ ++.+.|.+||=
T Consensus 220 ~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 220 AKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp SSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred cCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 34455654 6898777754 77799999983
No 108
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.37 E-value=1.2e-10 Score=100.13 Aligned_cols=214 Identities=12% Similarity=0.078 Sum_probs=126.7
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCC---CeEEEEeCCCCchhhhccCCccCCCCCCCCCC---CCCCCccchHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPK---LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG---RSFVPFQYIEEDVDI 167 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~---G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~---~~~~~~~~~~~~~~~ 167 (345)
+.+++|+|.+|-. ..|..++..|.+. .+.|+++.+.| |-.++... ... ...+++++++.
T Consensus 3 ~li~~IPGNPGlv-~fY~~Fl~~L~~~l~~~~~i~~ish~G-------------h~~~~~~~~~~~~~-~~~sL~~QI~h 67 (266)
T PF10230_consen 3 PLIVFIPGNPGLV-EFYEEFLSALYEKLNPQFEILGISHAG-------------HSTSPSNSKFSPNG-RLFSLQDQIEH 67 (266)
T ss_pred EEEEEECCCCChH-HHHHHHHHHHHHhCCCCCeeEEecCCC-------------CcCCcccccccCCC-CccCHHHHHHH
Confidence 5799999999995 9999988777633 59999999999 86664431 011 33377777777
Q ss_pred HHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCC---cccceeeEeccCCCCCchhHHH--HHH-h---------
Q psy4974 168 AYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYP---HMVHKLVIWGTKSFLTIDNVRV--FEG-M--------- 226 (345)
Q Consensus 168 ~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~--~~~-~--------- 226 (345)
..++++++ ...+++|+|||.|+++++++..+.+ .+|.+++++-|........... +.. +
T Consensus 68 k~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~~~~~~~~~~~~ 147 (266)
T PF10230_consen 68 KIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNGRRLTPLLFSPPPLVWL 147 (266)
T ss_pred HHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchhHHHHHHHhhccHHHHH
Confidence 66666654 2348999999999999999999998 7899999998865422211111 111 0
Q ss_pred -----HhccCCChhhHHHHHHHcccCC-chhh---------hhHHHHHHHHHHHHHhhCc---hhhhccCCCCCCCEEEE
Q psy4974 227 -----RRLSNWSPMARSEVLKAYDNDV-NYIT---------GIFNQYVDMVNLIFKSYGR---NVYQELLPYVDVPVLVF 288 (345)
Q Consensus 227 -----~~~~~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~Pvl~i 288 (345)
......+......+...+.... .... ....+.+.....-+..... .........-...+.++
T Consensus 148 ~~~~~~l~~~lP~~~~~~lv~~~~~~~~~~~~~t~~~l~~~~~v~qaL~Ma~~Em~~I~~~d~~~~~~~~~~~~~kl~f~ 227 (266)
T PF10230_consen 148 ASFLSFLLSLLPESVLRWLVRWVMGFPPPAVEATTKFLLSPRVVRQALYMARDEMREIREDDNDELIKHHNENGDKLWFY 227 (266)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHcCCChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHccCcchHHHHHHhccCCCEEEEE
Confidence 0011222223333333322221 0000 0011111111111111111 11122222226789999
Q ss_pred EeCCCCCCChHHHHHHHhhcCC--cEEEEe-CCCCCc
Q psy4974 289 HSADDVMVSTQQVQSLLNQLKF--CQYYQF-SSGGHS 322 (345)
Q Consensus 289 ~G~~D~~v~~~~~~~~~~~~~~--~~~~~~-~~~gH~ 322 (345)
+|.+|.+||.+..+++.+.+++ .++.+- ++..|.
T Consensus 228 fg~~D~Wvp~~~~~~l~~~~~~~~~~~~v~~~~i~Ha 264 (266)
T PF10230_consen 228 FGQNDHWVPNETRDELIERYPGHEPDVVVDEEGIPHA 264 (266)
T ss_pred EeCCCCCCCHHHHHHHHHHcCCCCCeEEEecCCCCCC
Confidence 9999999999999999999983 333322 455564
No 109
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.34 E-value=3.3e-11 Score=100.87 Aligned_cols=171 Identities=15% Similarity=0.153 Sum_probs=109.5
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
|++||+||+... ...|..++++++..||-|+++|+.. .+.. .... ......+..+++.+=++
T Consensus 18 PVv~f~~G~~~~-~s~Ys~ll~hvAShGyIVV~~d~~~-------------~~~~---~~~~-~~~~~~~vi~Wl~~~L~ 79 (259)
T PF12740_consen 18 PVVLFLHGFLLI-NSWYSQLLEHVASHGYIVVAPDLYS-------------IGGP---DDTD-EVASAAEVIDWLAKGLE 79 (259)
T ss_pred CEEEEeCCcCCC-HHHHHHHHHHHHhCceEEEEecccc-------------cCCC---Ccch-hHHHHHHHHHHHHhcch
Confidence 899999999976 4779999999999999999999655 3321 1111 22233333443332111
Q ss_pred -Hh------CCccEEEEEeChhHHHHHHHHHhC-----CcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHH
Q psy4974 174 -LL------GVCKVSLFGWCDGGHLSFVFSMKY-----PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVL 241 (345)
Q Consensus 174 -~~------~~~~i~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
.+ +..++.|.|||.||-+|..++..+ +.+++++++++|......... ..+..
T Consensus 80 ~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~-----------~~P~v----- 143 (259)
T PF12740_consen 80 SKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQ-----------TEPPV----- 143 (259)
T ss_pred hhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccC-----------CCCcc-----
Confidence 12 344899999999999999999887 558999999999874221100 00000
Q ss_pred HHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCC---------CC-hHHHHHHHhhcC-C
Q psy4974 242 KAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVM---------VS-TQQVQSLLNQLK-F 310 (345)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~---------v~-~~~~~~~~~~~~-~ 310 (345)
..+...--+.++|+++|...-+.. .| -..-+++.+..+ .
T Consensus 144 ------------------------------~~~~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p 193 (259)
T PF12740_consen 144 ------------------------------LTYTPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPP 193 (259)
T ss_pred ------------------------------ccCcccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCC
Confidence 000111123468999997776642 22 235666666664 4
Q ss_pred cEEEEeCCCCCcccccCh
Q psy4974 311 CQYYQFSSGGHSCHIKHG 328 (345)
Q Consensus 311 ~~~~~~~~~gH~~~~~~~ 328 (345)
+...+..+.||+-+++..
T Consensus 194 ~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 194 SWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred EEEEEeCCCCchHhhcCC
Confidence 566677899999888655
No 110
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.32 E-value=1.9e-10 Score=89.06 Aligned_cols=172 Identities=12% Similarity=0.059 Sum_probs=116.5
Q ss_pred ceEEEEcCcCCCchhhHHHHHHh-hCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTA-FDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~-L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
+.+|++||+.+|+...|....+. |.. +-.+++.. . ....++++++.+.+.+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~----a~rveq~~-------------w-----------~~P~~~dWi~~l~~~v 54 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN----ARRVEQDD-------------W-----------EAPVLDDWIARLEKEV 54 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc----chhcccCC-------------C-----------CCCCHHHHHHHHHHHH
Confidence 46899999999977888775532 221 22333323 1 2226777788888777
Q ss_pred HHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhh
Q psy4974 173 KLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYIT 252 (345)
Q Consensus 173 ~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (345)
... .++++||+||+|+.+++.++......|.++++++|+........ ......+.
T Consensus 55 ~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~-----------------~~~~~tf~------- 109 (181)
T COG3545 55 NAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIR-----------------PKHLMTFD------- 109 (181)
T ss_pred hcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccccc-----------------hhhccccC-------
Confidence 776 35799999999999999999987778999999999754321000 00000000
Q ss_pred hhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccc---cChH
Q psy4974 253 GIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHI---KHGQ 329 (345)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~---~~~~ 329 (345)
.....+..-|.+++.+.+|++++.+.++.+++.+ +..++...++||.--. ..-.
T Consensus 110 ----------------------~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w-gs~lv~~g~~GHiN~~sG~g~wp 166 (181)
T COG3545 110 ----------------------PIPREPLPFPSVVVASRNDPYVSYEHAEDLANAW-GSALVDVGEGGHINAESGFGPWP 166 (181)
T ss_pred ----------------------CCccccCCCceeEEEecCCCCCCHHHHHHHHHhc-cHhheecccccccchhhcCCCcH
Confidence 1112234569999999999999999999999987 5677788889997433 2234
Q ss_pred HHHHHHHHHHHh
Q psy4974 330 VFNEISRNFILE 341 (345)
Q Consensus 330 ~~~~~i~~fl~~ 341 (345)
+....+.+++.+
T Consensus 167 eg~~~l~~~~s~ 178 (181)
T COG3545 167 EGYALLAQLLSR 178 (181)
T ss_pred HHHHHHHHHhhh
Confidence 555566666554
No 111
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.31 E-value=2e-10 Score=96.85 Aligned_cols=100 Identities=19% Similarity=0.298 Sum_probs=84.1
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
|+|+++|+.+|.. ..|..+...|... ..|+.++.|| ++.-.. ...+++++++...+.+.
T Consensus 1 ~pLF~fhp~~G~~-~~~~~L~~~l~~~-~~v~~l~a~g-------------~~~~~~------~~~~l~~~a~~yv~~Ir 59 (257)
T COG3319 1 PPLFCFHPAGGSV-LAYAPLAAALGPL-LPVYGLQAPG-------------YGAGEQ------PFASLDDMAAAYVAAIR 59 (257)
T ss_pred CCEEEEcCCCCcH-HHHHHHHHHhccC-ceeeccccCc-------------cccccc------ccCCHHHHHHHHHHHHH
Confidence 5899999999995 9999999999998 9999999999 875322 33378888888887777
Q ss_pred HhCC-ccEEEEEeChhHHHHHHHHHhC---CcccceeeEeccCCC
Q psy4974 174 LLGV-CKVSLFGWCDGGHLSFVFSMKY---PHMVHKLVIWGTKSF 214 (345)
Q Consensus 174 ~~~~-~~i~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~ 214 (345)
.... .+++|+|||+||.+|..+|.+. .+.|..++++++...
T Consensus 60 ~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 60 RVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 6643 4999999999999999999874 457999999999877
No 112
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.30 E-value=1.5e-10 Score=121.68 Aligned_cols=207 Identities=14% Similarity=0.057 Sum_probs=124.3
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
++++++||++++. ..|..+.+.|... +.|+++|.|| ++... ... .+++++++++.+.++
T Consensus 1069 ~~l~~lh~~~g~~-~~~~~l~~~l~~~-~~v~~~~~~g-------------~~~~~--~~~----~~l~~la~~~~~~i~ 1127 (1296)
T PRK10252 1069 PTLFCFHPASGFA-WQFSVLSRYLDPQ-WSIYGIQSPR-------------PDGPM--QTA----TSLDEVCEAHLATLL 1127 (1296)
T ss_pred CCeEEecCCCCch-HHHHHHHHhcCCC-CcEEEEECCC-------------CCCCC--CCC----CCHHHHHHHHHHHHH
Confidence 6899999999995 9999999999876 9999999999 87652 222 278888999998888
Q ss_pred HhCC-ccEEEEEeChhHHHHHHHHHh---CCcccceeeEeccCCCCCchhHHH-HHHhH-hccCCChhhHHHHHHHcccC
Q psy4974 174 LLGV-CKVSLFGWCDGGHLSFVFSMK---YPHMVHKLVIWGTKSFLTIDNVRV-FEGMR-RLSNWSPMARSEVLKAYDND 247 (345)
Q Consensus 174 ~~~~-~~i~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 247 (345)
.+.. .+++++|||+||.+|..+|.+ .++++..++++++........... ..... ....................
T Consensus 1128 ~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1207 (1296)
T PRK10252 1128 EQQPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQGS 1207 (1296)
T ss_pred hhCCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHHHHHHhhhcc
Confidence 7654 489999999999999999986 477899999998743311000000 00000 00000000000001000000
Q ss_pred CchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccC
Q psy4974 248 VNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKH 327 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 327 (345)
............+..... .........+.+|++++.++.|..........+.+...+.+...++ ++|+.++..
T Consensus 1208 --~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~v~-g~H~~~~~~ 1280 (1296)
T PRK10252 1208 --LSTELFTTIEGNYADAVR----LLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWIAELDVYRQD-CAHVDIISP 1280 (1296)
T ss_pred --ccHHHHHHHHHHHHHHHH----HHHhccCCcccCceEEEEcCCCCcccCCcccchhhhcCCCEEEECC-CCHHHHCCc
Confidence 011111111111111111 1111223556789999999998755544444455444566777775 899987754
Q ss_pred h
Q psy4974 328 G 328 (345)
Q Consensus 328 ~ 328 (345)
+
T Consensus 1281 ~ 1281 (1296)
T PRK10252 1281 E 1281 (1296)
T ss_pred H
Confidence 3
No 113
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.29 E-value=1.2e-10 Score=100.72 Aligned_cols=228 Identities=15% Similarity=0.185 Sum_probs=132.2
Q ss_pred CCceEEEEcCcCCCchhhHH--HH-HHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchH------
Q psy4974 92 GAQVLFFTYGVLGEIRNSFK--KQ-LTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIE------ 162 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~--~~-~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~------ 162 (345)
.+|.+|.++|.|+.. .|+ .+ +..|.++|+..+.+..|- ||...+.......+.+..
T Consensus 91 ~rp~~IhLagTGDh~--f~rR~~l~a~pLl~~gi~s~~le~Py-------------yg~RkP~~Q~~s~l~~VsDl~~~g 155 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHG--FWRRRRLMARPLLKEGIASLILENPY-------------YGQRKPKDQRRSSLRNVSDLFVMG 155 (348)
T ss_pred CCceEEEecCCCccc--hhhhhhhhhhHHHHcCcceEEEeccc-------------ccccChhHhhcccccchhHHHHHH
Confidence 357889999998873 442 23 677777799999999999 987754432110111111
Q ss_pred ----HHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHH
Q psy4974 163 ----EDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARS 238 (345)
Q Consensus 163 ----~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (345)
..+..+..+++..|..++.+.|.||||.+|...|...|..+..+-++++.........-.+ .....|.....+
T Consensus 156 ~~~i~E~~~Ll~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvl---s~~i~W~~L~~q 232 (348)
T PF09752_consen 156 RATILESRALLHWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVL---SNSINWDALEKQ 232 (348)
T ss_pred hHHHHHHHHHHHHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhh---hcCCCHHHHHHH
Confidence 1234455666666888999999999999999999999987777666665433211110000 000011000000
Q ss_pred -------HHHHHcccCCc-------hhhhhHHHHHHHHHHHHHhhCchhhhccC-CCCCCCEEEEEeCCCCCCChHHHHH
Q psy4974 239 -------EVLKAYDNDVN-------YITGIFNQYVDMVNLIFKSYGRNVYQELL-PYVDVPVLVFHSADDVMVSTQQVQS 303 (345)
Q Consensus 239 -------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~Pvl~i~G~~D~~v~~~~~~~ 303 (345)
........... .......+....+...+...... .+.. +.-.-.+.++.+++|.+||......
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l--~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~ 310 (348)
T PF09752_consen 233 FEDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHL--TNFPVPVDPSAIIFVAAKNDAYVPRHGVLS 310 (348)
T ss_pred hcccchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccc--cccCCCCCCCcEEEEEecCceEechhhcch
Confidence 00000000000 00000011112222222221110 1111 1112358999999999999988889
Q ss_pred HHhhcCCcEEEEeCCCCCcc-cccChHHHHHHHHHHHH
Q psy4974 304 LLNQLKFCQYYQFSSGGHSC-HIKHGQVFNEISRNFIL 340 (345)
Q Consensus 304 ~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~ 340 (345)
+.+..|++++..++ +||.. ++-+.+.+.++|.+-++
T Consensus 311 Lq~~WPGsEvR~l~-gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 311 LQEIWPGSEVRYLP-GGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred HHHhCCCCeEEEec-CCcEEEeeechHHHHHHHHHHhh
Confidence 99999999999998 59974 44677888888887664
No 114
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.29 E-value=1.9e-10 Score=112.46 Aligned_cols=211 Identities=13% Similarity=0.079 Sum_probs=118.0
Q ss_pred HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC----------------
Q psy4974 113 QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLG---------------- 176 (345)
Q Consensus 113 ~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------------- 176 (345)
+.++|.++||.|+..|.|| .|.|+.....+ . .+..++..++++.+.
T Consensus 271 ~~~~~~~rGYaVV~~D~RG-------------tg~SeG~~~~~-~----~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~k 332 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIG-------------TRGSDGCPTTG-D----YQEIESMKAVIDWLNGRATAYTDRTRGKEVK 332 (767)
T ss_pred HHHHHHhCCeEEEEEcCCC-------------CCCCCCcCccC-C----HHHHHHHHHHHHHHhhCCccccccccccccc
Confidence 4578889999999999999 99997653322 1 223334433333332
Q ss_pred ----CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHH-HcccC---C
Q psy4974 177 ----VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLK-AYDND---V 248 (345)
Q Consensus 177 ----~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~ 248 (345)
..+|.++|.|+||.+++.+|...|+.++++|..++.......... .........+.......+.. .+... .
T Consensus 333 q~WsnGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~-~G~~~~~~g~~ged~d~l~~~~~~r~~~~~ 411 (767)
T PRK05371 333 ADWSNGKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRE-NGLVRAPGGYQGEDLDVLAELTYSRNLLAG 411 (767)
T ss_pred cCCCCCeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhc-CCceeccCCcCCcchhhHHHHhhhcccCcc
Confidence 359999999999999999999888889999988776442110000 00000000110000000000 00000 0
Q ss_pred c--hhhhhHHHHHHHHHHHHH--------hhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----CcEEE
Q psy4974 249 N--YITGIFNQYVDMVNLIFK--------SYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----FCQYY 314 (345)
Q Consensus 249 ~--~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~~~~~ 314 (345)
. .....++.....+..... .+...++...+.++++|+|+++|..|..++...+.++.+.+. ..++.
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~ 491 (767)
T PRK05371 412 DYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLF 491 (767)
T ss_pred hhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEE
Confidence 0 000111111111111110 011223345567899999999999999999877766666653 34555
Q ss_pred EeCCCCCcccc-cChHHHHHHHHHHHHhhc
Q psy4974 315 QFSSGGHSCHI-KHGQVFNEISRNFILEEN 343 (345)
Q Consensus 315 ~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~ 343 (345)
+. .++|.... ..+.++.+.+.+||....
T Consensus 492 l~-~g~H~~~~~~~~~d~~e~~~~Wfd~~L 520 (767)
T PRK05371 492 LH-QGGHVYPNNWQSIDFRDTMNAWFTHKL 520 (767)
T ss_pred Ee-CCCccCCCchhHHHHHHHHHHHHHhcc
Confidence 44 57886443 345677788888887654
No 115
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.29 E-value=3.4e-11 Score=100.56 Aligned_cols=190 Identities=15% Similarity=0.079 Sum_probs=98.5
Q ss_pred EEEEcCcCCC--chhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 96 LFFTYGVLGE--IRNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 96 vv~lHG~~~~--~~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
||++||++.. .......++..+++ .|+.|+.+|+|- .. ...+ ...+++..+.+..++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl-------------~p-----~~~~--p~~~~D~~~a~~~l~ 60 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRL-------------AP-----EAPF--PAALEDVKAAYRWLL 60 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE----------------TT-----TSST--THHHHHHHHHHHHHH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccc-------------cc-----cccc--cccccccccceeeec
Confidence 7999998754 12333445566654 799999999988 32 2222 112333333344444
Q ss_pred HH-----hCCccEEEEEeChhHHHHHHHHHhCCc----ccceeeEeccCCCC-CchhHHHH--HHhHhccCCChhhHHHH
Q psy4974 173 KL-----LGVCKVSLFGWCDGGHLSFVFSMKYPH----MVHKLVIWGTKSFL-TIDNVRVF--EGMRRLSNWSPMARSEV 240 (345)
Q Consensus 173 ~~-----~~~~~i~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~ 240 (345)
+. .+.++|+|+|+|.||.+|+.++....+ .++++++++|.... ........ ........+.......+
T Consensus 61 ~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (211)
T PF07859_consen 61 KNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWF 140 (211)
T ss_dssp HTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHH
T ss_pred cccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccccccccccc
Confidence 44 334599999999999999999976433 48999999997644 11111111 01111011111111111
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhc-cCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc----CCcEEEE
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQE-LLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL----KFCQYYQ 315 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~----~~~~~~~ 315 (345)
...+... ... .......... .++. -.|+++++|+.|.+++ ....+.+.+ .++++++
T Consensus 141 ~~~~~~~--~~~--------------~~~~~sp~~~~~~~~-~Pp~~i~~g~~D~l~~--~~~~~~~~L~~~gv~v~~~~ 201 (211)
T PF07859_consen 141 WKLYLPG--SDR--------------DDPLASPLNASDLKG-LPPTLIIHGEDDVLVD--DSLRFAEKLKKAGVDVELHV 201 (211)
T ss_dssp HHHHHST--GGT--------------TSTTTSGGGSSCCTT-CHEEEEEEETTSTTHH--HHHHHHHHHHHTT-EEEEEE
T ss_pred ccccccc--ccc--------------ccccccccccccccc-CCCeeeeccccccchH--HHHHHHHHHHHCCCCEEEEE
Confidence 1111100 000 0000000111 1222 2399999999998764 445555544 3578999
Q ss_pred eCCCCCccc
Q psy4974 316 FSSGGHSCH 324 (345)
Q Consensus 316 ~~~~gH~~~ 324 (345)
+++++|.+.
T Consensus 202 ~~g~~H~f~ 210 (211)
T PF07859_consen 202 YPGMPHGFF 210 (211)
T ss_dssp ETTEETTGG
T ss_pred ECCCeEEee
Confidence 999999765
No 116
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.26 E-value=3.1e-11 Score=83.05 Aligned_cols=76 Identities=13% Similarity=0.219 Sum_probs=63.5
Q ss_pred CceEEEEEcCCC---CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCC
Q psy4974 81 GCDIRFIKYGSG---AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVP 157 (345)
Q Consensus 81 g~~l~~~~~g~~---~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~ 157 (345)
|.+|+++.+.+. +.+|+++||.+.++ ..|..+++.|+++||.|+++|+|| ||.|+.... .
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~-~ry~~~a~~L~~~G~~V~~~D~rG-------------hG~S~g~rg---~ 63 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHS-GRYAHLAEFLAEQGYAVFAYDHRG-------------HGRSEGKRG---H 63 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHH-HHHHHHHHHHHhCCCEEEEECCCc-------------CCCCCCccc---c
Confidence 567888887543 35899999999996 899999999999999999999999 999975433 4
Q ss_pred ccchHHHHHHHHHHHH
Q psy4974 158 FQYIEEDVDIAYELLK 173 (345)
Q Consensus 158 ~~~~~~~~~~~~~~l~ 173 (345)
..+++++++|+..+++
T Consensus 64 ~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 64 IDSFDDYVDDLHQFIQ 79 (79)
T ss_pred cCCHHHHHHHHHHHhC
Confidence 5578888999988763
No 117
>KOG2112|consensus
Probab=99.22 E-value=5.6e-10 Score=89.07 Aligned_cols=186 Identities=13% Similarity=0.115 Sum_probs=125.5
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC--CCCCCCCccchHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP--KGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~--~~~~~~~~~~~~~~~~~~~~~ 171 (345)
.+||++||.+.+. ..|..+++.|.......+++..|-+.+..+.|.-...+.+--. ..... +...+...++.+..+
T Consensus 4 atIi~LHglGDsg-~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~-d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 4 ATIIFLHGLGDSG-SGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPE-DEEGLHRAADNIANL 81 (206)
T ss_pred EEEEEEecCCCCC-ccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccch-hhhHHHHHHHHHHHH
Confidence 4899999999995 9999888888777799999998887777777775433322110 00111 233455556667777
Q ss_pred HHHh---C--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHccc
Q psy4974 172 LKLL---G--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDN 246 (345)
Q Consensus 172 l~~~---~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (345)
+++. + ..+|.+-|+|+||.+|++.+..+|..+.+++...+........ +..
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~------------------------~~~ 137 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIG------------------------LPG 137 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhh------------------------ccC
Confidence 6654 3 3478999999999999999999987777777665543311000 000
Q ss_pred CCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc----CCcEEEEeCCCCCc
Q psy4974 247 DVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL----KFCQYYQFSSGGHS 322 (345)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~----~~~~~~~~~~~gH~ 322 (345)
. ....+ ..|++..||+.|++||....+...+.+ ..++++.+++.+|.
T Consensus 138 ~---------------------------~~~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~ 188 (206)
T KOG2112|consen 138 W---------------------------LPGVN--YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHS 188 (206)
T ss_pred C---------------------------ccccC--cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccc
Confidence 0 00011 679999999999999987666665554 24788999999998
Q ss_pred ccccChHHHHHH
Q psy4974 323 CHIKHGQVFNEI 334 (345)
Q Consensus 323 ~~~~~~~~~~~~ 334 (345)
...++-+++...
T Consensus 189 ~~~~e~~~~~~~ 200 (206)
T KOG2112|consen 189 TSPQELDDLKSW 200 (206)
T ss_pred ccHHHHHHHHHH
Confidence 875444444333
No 118
>KOG2551|consensus
Probab=99.21 E-value=1.4e-09 Score=87.46 Aligned_cols=186 Identities=17% Similarity=0.186 Sum_probs=113.8
Q ss_pred CceEEEEcCcCCCchhhHHH----HHHhhCCCCeEEEEeCCCCchhhhccCCc---------cC------CCCCCCCCCC
Q psy4974 93 AQVLFFTYGVLGEIRNSFKK----QLTAFDPKLFTSIFWDPPGNVVLYLLGKT---------CS------GYGQSLPKGR 153 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~----~~~~L~~~G~~vi~~D~~G~~~~~~~g~~---------~~------~~G~s~~~~~ 153 (345)
++-|+|+||+--+. ..|.. +...|.+. +..+.+|-|-.-. -.+.+ +. .+|.-.....
T Consensus 5 k~rvLcLHGfrQsg-~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~--~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~ 80 (230)
T KOG2551|consen 5 KLRVLCLHGFRQSG-KVFSEKTGSLRKLLKKL-AELVFPDAPHELP--KADLPDSEREKKFDAPPDVEQNRYGWFSNNEA 80 (230)
T ss_pred CceEEEecchhhcc-HHHHHHhhhHHHHHHhh-heEEecCCCccCC--cccCCcccccccccCCcccccchhhhhccccc
Confidence 46799999999885 66654 33445555 7777777663000 00000 00 0111000000
Q ss_pred CCCCccchHHHHHHHHHHHHHhCCccE-EEEEeChhHHHHHHHHHhC--C------cccceeeEeccCCCCCchhHHHHH
Q psy4974 154 SFVPFQYIEEDVDIAYELLKLLGVCKV-SLFGWCDGGHLSFVFSMKY--P------HMVHKLVIWGTKSFLTIDNVRVFE 224 (345)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~l~~~~~~~i-~lvGhS~Gg~ia~~~a~~~--p------~~v~~lvl~~~~~~~~~~~~~~~~ 224 (345)
.......+++-.+.+.+.+...| |+ .|+|+|.|+.++..++... . ..++-+|++++........
T Consensus 81 ~~~~~~~~eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~----- 153 (230)
T KOG2551|consen 81 SFTEYFGFEESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKL----- 153 (230)
T ss_pred ccccccChHHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchh-----
Confidence 00012234555677777777766 55 4999999999999888721 1 1357777777754421000
Q ss_pred HhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHH
Q psy4974 225 GMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSL 304 (345)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~ 304 (345)
+-......+++|.|-|.|+.|.++|...+..+
T Consensus 154 ------------------------------------------------~~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L 185 (230)
T KOG2551|consen 154 ------------------------------------------------DESAYKRPLSTPSLHIFGETDTIVPSERSEQL 185 (230)
T ss_pred ------------------------------------------------hhhhhccCCCCCeeEEecccceeecchHHHHH
Confidence 00112346899999999999999999999999
Q ss_pred HhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 305 LNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 305 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
++.+++..++.-+ +||.+.-.. ...+.|.+||.
T Consensus 186 ~~~~~~a~vl~Hp-ggH~VP~~~--~~~~~i~~fi~ 218 (230)
T KOG2551|consen 186 AESFKDATVLEHP-GGHIVPNKA--KYKEKIADFIQ 218 (230)
T ss_pred HHhcCCCeEEecC-CCccCCCch--HHHHHHHHHHH
Confidence 9999998655555 899987544 45555555554
No 119
>KOG2100|consensus
Probab=99.20 E-value=5.4e-10 Score=108.98 Aligned_cols=223 Identities=17% Similarity=0.222 Sum_probs=136.6
Q ss_pred eeEEEcCceEEEEEcCC------CC-ceEEEEcCcCCCc------hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCc
Q psy4974 75 GFFSIKGCDIRFIKYGS------GA-QVLFFTYGVLGEI------RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKT 141 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~------~~-p~vv~lHG~~~~~------~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~ 141 (345)
..+..+|...++...-+ .+ |.+|.+||++++- .-.|... .....|+.|+.+|.||
T Consensus 501 ~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RG---------- 568 (755)
T KOG2100|consen 501 GKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRG---------- 568 (755)
T ss_pred EEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCC----------
Confidence 34455888887775432 22 7889999999741 1234333 4567799999999999
Q ss_pred cCCCCCCC--CCCCCCCCccchHHHHHHHHHHHHHh--CCccEEEEEeChhHHHHHHHHHhCCcc-cceeeEeccCCCCC
Q psy4974 142 CSGYGQSL--PKGRSFVPFQYIEEDVDIAYELLKLL--GVCKVSLFGWCDGGHLSFVFSMKYPHM-VHKLVIWGTKSFLT 216 (345)
Q Consensus 142 ~~~~G~s~--~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~i~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~ 216 (345)
+.++|..- ...+.. .....++....+..+++.. +.+++.|+|+|.||++++.++...|+. ++..+.++|.....
T Consensus 569 s~~~G~~~~~~~~~~l-G~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 569 SGGYGWDFRSALPRNL-GDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL 647 (755)
T ss_pred cCCcchhHHHHhhhhc-CCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee
Confidence 23333331 111222 2224455555555555544 334899999999999999999998855 45559999987643
Q ss_pred chhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCE-EEEEeCCCCC
Q psy4974 217 IDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPV-LVFHSADDVM 295 (345)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv-l~i~G~~D~~ 295 (345)
........ + .++.. ...... + ........+..++.|. |++||+.|..
T Consensus 648 -~yds~~te-r---------------ymg~p----~~~~~~--------y---~e~~~~~~~~~~~~~~~LliHGt~Ddn 695 (755)
T KOG2100|consen 648 -YYDSTYTE-R---------------YMGLP----SENDKG--------Y---EESSVSSPANNIKTPKLLLIHGTEDDN 695 (755)
T ss_pred -eecccccH-h---------------hcCCC----ccccch--------h---hhccccchhhhhccCCEEEEEcCCcCC
Confidence 11100000 0 00000 000000 0 0111122334445455 9999999999
Q ss_pred CChHHHHHHHhhcC----CcEEEEeCCCCCcccccCh-HHHHHHHHHHHHhh
Q psy4974 296 VSTQQVQSLLNQLK----FCQYYQFSSGGHSCHIKHG-QVFNEISRNFILEE 342 (345)
Q Consensus 296 v~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~-~~~~~~i~~fl~~~ 342 (345)
|+.+.+..+.+.+. ..+..++|+.+|.+..-.. ..+...+..|+...
T Consensus 696 Vh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 696 VHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDC 747 (755)
T ss_pred cCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHH
Confidence 99988888887763 3688999999999876433 66778888888744
No 120
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.20 E-value=4.1e-10 Score=98.84 Aligned_cols=211 Identities=11% Similarity=0.057 Sum_probs=126.1
Q ss_pred CceEEEEcCcCCCchhhH-----HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccc-h-HHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSF-----KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQY-I-EEDV 165 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~-----~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~-~-~~~~ 165 (345)
++|++++|.+... ...| ..++..|.++|..|+.+++++ -..+.. .. ..++ + +...
T Consensus 107 ~~PlLiVpP~iNk-~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~n-------------Pd~~~~---~~-~~edYi~e~l~ 168 (445)
T COG3243 107 KRPLLIVPPWINK-FYILDLSPEKSLVRWLLEQGLDVFVISWRN-------------PDASLA---AK-NLEDYILEGLS 168 (445)
T ss_pred CCceEeeccccCc-eeEEeCCCCccHHHHHHHcCCceEEEeccC-------------chHhhh---hc-cHHHHHHHHHH
Confidence 3689999998665 2444 457888999999999999988 444422 11 1111 1 3334
Q ss_pred HHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcc-cceeeEeccCCCCCchh-------HHHH----HHhHhccCCC
Q psy4974 166 DIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHM-VHKLVIWGTKSFLTIDN-------VRVF----EGMRRLSNWS 233 (345)
Q Consensus 166 ~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~-------~~~~----~~~~~~~~~~ 233 (345)
+.+..+.+..+.++|.++|+|.||.++..+++.++.+ |+.++++.+...+.... .... ..+......+
T Consensus 169 ~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lp 248 (445)
T COG3243 169 EAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILP 248 (445)
T ss_pred HHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCC
Confidence 5555666667889999999999999999998888877 99999988755433211 0001 1111111111
Q ss_pred hhhHHHHHHHcccCC-----------------------------chhhhhHHHHHHHHHHHHHhh---C----chhhhcc
Q psy4974 234 PMARSEVLKAYDNDV-----------------------------NYITGIFNQYVDMVNLIFKSY---G----RNVYQEL 277 (345)
Q Consensus 234 ~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~ 277 (345)
.........++.... .+.......++ +..+... . -....-.
T Consensus 249 g~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~L---rn~y~~N~l~~g~~~v~G~~Vd 325 (445)
T COG3243 249 GWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYL---RNFYLENRLIRGGLEVSGTMVD 325 (445)
T ss_pred hHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHH---HHHHHhChhhccceEECCEEec
Confidence 111111111111111 01111111111 1111110 0 0112334
Q ss_pred CCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC-cEEEEeCCCCCcccc
Q psy4974 278 LPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF-CQYYQFSSGGHSCHI 325 (345)
Q Consensus 278 l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~ 325 (345)
+.+|+||++.+.|++|.++|.+.....+..+++ ++++.. ++||....
T Consensus 326 L~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~-~sGHIa~v 373 (445)
T COG3243 326 LGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLS-RSGHIAGV 373 (445)
T ss_pred hhhcccceEEEeecccccCCHHHHHHHHHhcCCceEEEEe-cCceEEEE
Confidence 678999999999999999999999999999887 445444 69998655
No 121
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.19 E-value=1.9e-10 Score=95.80 Aligned_cols=175 Identities=16% Similarity=0.182 Sum_probs=89.4
Q ss_pred CceEEEEcCcCCCchhhHHHHH----HhhCCCCeEEEEeCCCCchh--hhcc------------CCccCCCCCCCCCCCC
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQL----TAFDPKLFTSIFWDPPGNVV--LYLL------------GKTCSGYGQSLPKGRS 154 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~----~~L~~~G~~vi~~D~~G~~~--~~~~------------g~~~~~~G~s~~~~~~ 154 (345)
++.|+||||++.++ ..++... ..|.+.++..+.+|-|-... --+. ....+.+-.... ..
T Consensus 4 k~riLcLHG~~~na-~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~--~~ 80 (212)
T PF03959_consen 4 KPRILCLHGYGQNA-EIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDD--DD 80 (212)
T ss_dssp --EEEEE--TT--H-HHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S---S
T ss_pred CceEEEeCCCCcCH-HHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCC--Cc
Confidence 46899999999995 7776654 44544259999988665110 0000 000000111100 01
Q ss_pred CCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhC--------CcccceeeEeccCCCCCchhHHHHHHh
Q psy4974 155 FVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY--------PHMVHKLVIWGTKSFLTIDNVRVFEGM 226 (345)
Q Consensus 155 ~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~~~~~~~~~~~~~~ 226 (345)
. ....+++..+.+.++++..+. =..|+|+|.||.+|..++... ...++-+|++++.......
T Consensus 81 ~-~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~-------- 150 (212)
T PF03959_consen 81 H-EYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD-------- 150 (212)
T ss_dssp G-GG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE---------
T ss_pred c-cccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh--------
Confidence 1 233566667777787777662 346999999999998888542 1247888888876542211
Q ss_pred HhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHh
Q psy4974 227 RRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLN 306 (345)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~ 306 (345)
+... . ....|++|+|.|+|.+|.+++++.++.+.+
T Consensus 151 -----------------~~~~---------------------------~-~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~ 185 (212)
T PF03959_consen 151 -----------------YQEL---------------------------Y-DEPKISIPTLHVIGENDPVVPPERSEALAE 185 (212)
T ss_dssp -----------------GTTT---------------------------T---TT---EEEEEEETT-SSS-HHHHHHHHH
T ss_pred -----------------hhhh---------------------------h-ccccCCCCeEEEEeCCCCCcchHHHHHHHH
Confidence 0000 0 234579999999999999999999999999
Q ss_pred hcCC-cEEEEeCCCCCccccc
Q psy4974 307 QLKF-CQYYQFSSGGHSCHIK 326 (345)
Q Consensus 307 ~~~~-~~~~~~~~~gH~~~~~ 326 (345)
.+.+ .+++..+ +||.+...
T Consensus 186 ~~~~~~~v~~h~-gGH~vP~~ 205 (212)
T PF03959_consen 186 MFDPDARVIEHD-GGHHVPRK 205 (212)
T ss_dssp HHHHHEEEEEES-SSSS----
T ss_pred hccCCcEEEEEC-CCCcCcCC
Confidence 8876 6776675 89988754
No 122
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.15 E-value=3.8e-09 Score=87.44 Aligned_cols=113 Identities=11% Similarity=0.148 Sum_probs=68.9
Q ss_pred CceEEEEcCcCCCchhhHHHH--HHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQ--LTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~--~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
.|.||++||.+.+. ..+... ...|++ +||-|+.++...+.+. + .|..+....... ..........-+.
T Consensus 16 ~PLVv~LHG~~~~a-~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~---~-~cw~w~~~~~~~----g~~d~~~i~~lv~ 86 (220)
T PF10503_consen 16 VPLVVVLHGCGQSA-EDFAAGSGWNALADREGFIVVYPEQSRRANP---Q-GCWNWFSDDQQR----GGGDVAFIAALVD 86 (220)
T ss_pred CCEEEEeCCCCCCH-HHHHhhcCHHHHhhcCCeEEEcccccccCCC---C-Cccccccccccc----CccchhhHHHHHH
Confidence 47999999999985 555432 234554 4899999986431100 0 111110000000 1111111222233
Q ss_pred HHHHHhCCc--cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 170 ELLKLLGVC--KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 170 ~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.+..+.+++ +|++.|+|.||.++..++..+|+.+.++...++...
T Consensus 87 ~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 87 YVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred hHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 444454544 899999999999999999999999999988887655
No 123
>PRK04940 hypothetical protein; Provisional
Probab=99.15 E-value=1.4e-08 Score=80.37 Aligned_cols=118 Identities=15% Similarity=0.077 Sum_probs=74.8
Q ss_pred ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHH
Q psy4974 178 CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQ 257 (345)
Q Consensus 178 ~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (345)
+++.|||+|+||+.|..+|.++. + ..|+++|+..+.... ....+...+ .......
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv~P~~~L---------------------~~~ig~~~~-y~~~~~~ 114 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNLFPEENM---------------------EGKIDRPEE-YADIATK 114 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCCChHHHH---------------------HHHhCCCcc-hhhhhHH
Confidence 57999999999999999999985 3 678889987642111 111111111 1112222
Q ss_pred HHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCc-EEEEeCCCCCcccccChHHHHHHHH
Q psy4974 258 YVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFC-QYYQFSSGGHSCHIKHGQVFNEISR 336 (345)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~ 336 (345)
.++.+. ..-+-..+++..+.|++.+...+..... ++ +..+.+|++|-+ ++-++....|.
T Consensus 115 h~~eL~---------------~~~p~r~~vllq~gDEvLDyr~a~~~y~---~~y~~~v~~GGdH~f--~~fe~~l~~I~ 174 (180)
T PRK04940 115 CVTNFR---------------EKNRDRCLVILSRNDEVLDSQRTAEELH---PYYEIVWDEEQTHKF--KNISPHLQRIK 174 (180)
T ss_pred HHHHhh---------------hcCcccEEEEEeCCCcccCHHHHHHHhc---cCceEEEECCCCCCC--CCHHHHHHHHH
Confidence 222222 1123346899999999998766655443 44 688888888865 34566788888
Q ss_pred HHHH
Q psy4974 337 NFIL 340 (345)
Q Consensus 337 ~fl~ 340 (345)
+|+.
T Consensus 175 ~F~~ 178 (180)
T PRK04940 175 AFKT 178 (180)
T ss_pred HHHh
Confidence 8884
No 124
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.14 E-value=5.5e-10 Score=88.53 Aligned_cols=181 Identities=15% Similarity=0.061 Sum_probs=111.9
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHH
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKL 174 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~ 174 (345)
.+||+.|=+|-. ..=..+++.|+++|+.|+.+|-+- |-.+.+.+. +...+..+.+..+.++
T Consensus 4 ~~v~~SGDgGw~-~~d~~~a~~l~~~G~~VvGvdsl~-------------Yfw~~rtP~-----~~a~Dl~~~i~~y~~~ 64 (192)
T PF06057_consen 4 LAVFFSGDGGWR-DLDKQIAEALAKQGVPVVGVDSLR-------------YFWSERTPE-----QTAADLARIIRHYRAR 64 (192)
T ss_pred EEEEEeCCCCch-hhhHHHHHHHHHCCCeEEEechHH-------------HHhhhCCHH-----HHHHHHHHHHHHHHHH
Confidence 578888876663 455668899999999999999777 555533221 1222333333344555
Q ss_pred hCCccEEEEEeChhHHHHHHHHHhCC----cccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCch
Q psy4974 175 LGVCKVSLFGWCDGGHLSFVFSMKYP----HMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNY 250 (345)
Q Consensus 175 ~~~~~i~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (345)
.+.++++|+|+|+|+-+......+.| ++|+.++|+++.....-.. ....++...
T Consensus 65 w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFei-------------------hv~~wlg~~--- 122 (192)
T PF06057_consen 65 WGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEI-------------------HVSGWLGMG--- 122 (192)
T ss_pred hCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEE-------------------EhhhhcCCC---
Confidence 67789999999999988887777776 4799999999865422100 000111111
Q ss_pred hhhhHHHHHHHHHHHHHhhCchhhhccCCCCC-CCEEEEEeCCCCC--CChHHHHHHHhhcCCcEEEEeCCCCCcccccC
Q psy4974 251 ITGIFNQYVDMVNLIFKSYGRNVYQELLPYVD-VPVLVFHSADDVM--VSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKH 327 (345)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~Pvl~i~G~~D~~--v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 327 (345)
......+....+.+++ .|++.|+|+++.- +| .+. .++.+.+.+| +||.+- ++
T Consensus 123 ----------------~~~~~~~~~pei~~l~~~~v~CiyG~~E~d~~cp-----~l~--~~~~~~i~lp-GgHHfd-~d 177 (192)
T PF06057_consen 123 ----------------GDDAAYPVIPEIAKLPPAPVQCIYGEDEDDSLCP-----SLR--QPGVEVIALP-GGHHFD-GD 177 (192)
T ss_pred ----------------CCcccCCchHHHHhCCCCeEEEEEcCCCCCCcCc-----ccc--CCCcEEEEcC-CCcCCC-CC
Confidence 0000011222333443 5999999987753 33 111 2578999998 566554 45
Q ss_pred hHHHHHHHHHHHHh
Q psy4974 328 GQVFNEISRNFILE 341 (345)
Q Consensus 328 ~~~~~~~i~~fl~~ 341 (345)
-+++++.|.+-|+.
T Consensus 178 y~~La~~Il~~l~~ 191 (192)
T PF06057_consen 178 YDALAKRILDALKA 191 (192)
T ss_pred HHHHHHHHHHHHhc
Confidence 67777877776653
No 125
>KOG3975|consensus
Probab=99.14 E-value=2e-08 Score=81.84 Aligned_cols=245 Identities=11% Similarity=0.061 Sum_probs=142.6
Q ss_pred eeeEEEcCceEEEEEc-------CCCCceEEEEcCcCCCchhhHHHHHHhhCCC-C--eEEEEeCCCCchhhhccCCccC
Q psy4974 74 EGFFSIKGCDIRFIKY-------GSGAQVLFFTYGVLGEIRNSFKKQLTAFDPK-L--FTSIFWDPPGNVVLYLLGKTCS 143 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~-------g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~-G--~~vi~~D~~G~~~~~~~g~~~~ 143 (345)
+.++..+|.++..... +..++.++++.|.+|.. ..|.+++..|..+ + +.++.+-..|
T Consensus 3 e~~~~~~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~-gFY~~F~~~L~~~l~~r~~~wtIsh~~------------ 69 (301)
T KOG3975|consen 3 EKEYTKSGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLL-GFYTEFARHLHLNLIDRLPVWTISHAG------------ 69 (301)
T ss_pred ceeeeecCCcccceeeeeeeccCCCCceEEEEecCCCCch-hHHHHHHHHHHHhcccccceeEEeccc------------
Confidence 4455555555444332 34557899999999995 8888888776443 1 5688887777
Q ss_pred CCCCCC---CC---CCCCCCccchHHHHHHHHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhCC--cccceeeEeccCC
Q psy4974 144 GYGQSL---PK---GRSFVPFQYIEEDVDIAYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYP--HMVHKLVIWGTKS 213 (345)
Q Consensus 144 ~~G~s~---~~---~~~~~~~~~~~~~~~~~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~ 213 (345)
|-.-+ .. .... +.-+++++++.-.++++..-. .+++++|||.|+++.+.+..... -.|.+++++-|..
T Consensus 70 -H~~~P~sl~~~~s~~~~-eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 70 -HALMPASLREDHSHTNE-EIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred -cccCCcccccccccccc-cccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 64332 11 1111 233677888888888887643 38999999999999999886432 3577888777643
Q ss_pred CCCchhH------HHHHHhH------h--ccC-CChhhHHHHHHHcccCCchhhhhHHHH----------------HHHH
Q psy4974 214 FLTIDNV------RVFEGMR------R--LSN-WSPMARSEVLKAYDNDVNYITGIFNQY----------------VDMV 262 (345)
Q Consensus 214 ~~~~~~~------~~~~~~~------~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~ 262 (345)
......+ .....+. . ... .+...+..+.+.+.............. -+++
T Consensus 148 erM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm 227 (301)
T KOG3975|consen 148 ERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEM 227 (301)
T ss_pred HHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHH
Confidence 2111000 0000000 0 001 111222222222211110111111000 0011
Q ss_pred HHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCc--EEEEeCCCCCcccccChHHHHHHHHHHH
Q psy4974 263 NLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFC--QYYQFSSGGHSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~--~~~~~~~~gH~~~~~~~~~~~~~i~~fl 339 (345)
..... ...+.+.+-.+-+.+.+|..|.+||.+....+.+.+|.. ++-+ ++..|.+...+.+..+..+.+.+
T Consensus 228 ~eV~~-----~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 228 EEVTT-----RDIEYCEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred HHHHH-----hHHHHHHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 11111 012223344567899999999999999999999999864 4444 67999999999999888888765
No 126
>KOG1515|consensus
Probab=99.12 E-value=1.8e-09 Score=94.79 Aligned_cols=216 Identities=15% Similarity=0.027 Sum_probs=122.9
Q ss_pred CceEEEEcCcCCC----chhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 93 AQVLFFTYGVLGE----IRNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 93 ~p~vv~lHG~~~~----~~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
.|.||++||+|.. ....|..+...++. .+..|+++|+|- - |+..+ + ..+++-.+.
T Consensus 90 ~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRL-------------A-----PEh~~-P-a~y~D~~~A 149 (336)
T KOG1515|consen 90 LPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRL-------------A-----PEHPF-P-AAYDDGWAA 149 (336)
T ss_pred ceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCccc-------------C-----CCCCC-C-ccchHHHHH
Confidence 4799999998753 13567777777744 479999999988 2 22222 2 234555555
Q ss_pred HHHHHHH------hCCccEEEEEeChhHHHHHHHHHhC------CcccceeeEeccCCCCCchhHHHHHHhHhcc-CCCh
Q psy4974 168 AYELLKL------LGVCKVSLFGWCDGGHLSFVFSMKY------PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS-NWSP 234 (345)
Q Consensus 168 ~~~~l~~------~~~~~i~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~ 234 (345)
+..+.++ .+.++++|+|-|.||.+|..+|.+. +.++++.|++-|............+...... ....
T Consensus 150 l~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~~~~~ 229 (336)
T KOG1515|consen 150 LKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSPELAR 229 (336)
T ss_pred HHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCCcchhH
Confidence 5555553 2445899999999999999988763 3579999999997764433322222111111 0000
Q ss_pred hhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhh----hccCCCCCC-CEEEEEeCCCCCCCh--HHHHHHHhh
Q psy4974 235 MARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVY----QELLPYVDV-PVLVFHSADDVMVST--QQVQSLLNQ 307 (345)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~i~~-Pvl~i~G~~D~~v~~--~~~~~~~~~ 307 (345)
.......+.+-++. .. ......-.+. .....-..+ |++++.++.|.+... ..++++.+.
T Consensus 230 ~~~~~~w~~~lP~~--~~------------~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~ 295 (336)
T KOG1515|consen 230 PKIDKWWRLLLPNG--KT------------DLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKA 295 (336)
T ss_pred HHHHHHHHHhCCCC--CC------------CcCCccccccccccccCccccCCCceEEEEeCchhhhhhhHHHHHHHHHc
Confidence 01111111111110 00 0000000000 111222334 599999999987652 233444333
Q ss_pred cCCcEEEEeCCCCCcccccCh-----HHHHHHHHHHHHhh
Q psy4974 308 LKFCQYYQFSSGGHSCHIKHG-----QVFNEISRNFILEE 342 (345)
Q Consensus 308 ~~~~~~~~~~~~gH~~~~~~~-----~~~~~~i~~fl~~~ 342 (345)
--.+++..++++.|.++.-.+ .++.+.+.+|+.+.
T Consensus 296 Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 296 GVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred CCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 234567789999998776443 46778888888764
No 127
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.11 E-value=4.6e-09 Score=91.26 Aligned_cols=104 Identities=16% Similarity=0.147 Sum_probs=68.2
Q ss_pred ceEEEEcCcCCCchhhHHHH---H------HhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQ---L------TAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEED 164 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~---~------~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~ 164 (345)
|+||..|+.+.......... . ..|.++||.|+..|.|| .|.|....... ....
T Consensus 21 P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG-------------~g~S~G~~~~~-----~~~e 82 (272)
T PF02129_consen 21 PVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRG-------------TGGSEGEFDPM-----SPNE 82 (272)
T ss_dssp EEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TT-------------STTS-S-B-TT-----SHHH
T ss_pred cEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcc-------------cccCCCccccC-----ChhH
Confidence 78999999986521222211 1 12888999999999999 99996554331 2333
Q ss_pred HHHHH---HHHHHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 165 VDIAY---ELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 165 ~~~~~---~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
++|.. +++..... .+|.++|.|++|..++.+|...|..+++++...+....
T Consensus 83 ~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 83 AQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred HHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 44444 44444333 28999999999999999999888889999998775543
No 128
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.10 E-value=4.7e-10 Score=101.12 Aligned_cols=170 Identities=14% Similarity=0.125 Sum_probs=83.3
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCC-chhhhc--cCCccCCCC--CCCCCC------CCCCCcc---
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPG-NVVLYL--LGKTCSGYG--QSLPKG------RSFVPFQ--- 159 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G-~~~~~~--~g~~~~~~G--~s~~~~------~~~~~~~--- 159 (345)
|+|||-||++++ +..|..++..|+.+||-|+++|.|. |..+.+ ......... ...... .......
T Consensus 101 PvvIFSHGlgg~-R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (379)
T PF03403_consen 101 PVVIFSHGLGGS-RTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFE 179 (379)
T ss_dssp EEEEEE--TT---TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHH
T ss_pred CEEEEeCCCCcc-hhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHH
Confidence 899999999999 6999999999999999999999995 211111 111100000 000000 0000000
Q ss_pred ----chHHHHHHHHHHHHHh--------------------------CCccEEEEEeChhHHHHHHHHHhCCcccceeeEe
Q psy4974 160 ----YIEEDVDIAYELLKLL--------------------------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIW 209 (345)
Q Consensus 160 ----~~~~~~~~~~~~l~~~--------------------------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 209 (345)
.++..+.++..+++.+ +.+++.++|||+||..++..+.+. .++++.|++
T Consensus 180 ~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~L 258 (379)
T PF03403_consen 180 LRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGILL 258 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEEe
Confidence 0111122333232221 134799999999999999988776 579999999
Q ss_pred ccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEE
Q psy4974 210 GTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFH 289 (345)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~ 289 (345)
++...+-. .+....++.|+|+|.
T Consensus 259 D~W~~Pl~---------------------------------------------------------~~~~~~i~~P~L~In 281 (379)
T PF03403_consen 259 DPWMFPLG---------------------------------------------------------DEIYSKIPQPLLFIN 281 (379)
T ss_dssp S---TTS----------------------------------------------------------GGGGGG--S-EEEEE
T ss_pred CCcccCCC---------------------------------------------------------cccccCCCCCEEEEE
Confidence 99754210 001134678999998
Q ss_pred eCCCCCCChHHHHHHHhh---cCCcEEEEeCCCCCccc
Q psy4974 290 SADDVMVSTQQVQSLLNQ---LKFCQYYQFSSGGHSCH 324 (345)
Q Consensus 290 G~~D~~v~~~~~~~~~~~---~~~~~~~~~~~~gH~~~ 324 (345)
++. +........+.+. -++..++.+.|+.|..+
T Consensus 282 Se~--f~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~ 317 (379)
T PF03403_consen 282 SES--FQWWENIFRMKKVISNNKESRMLTIKGTAHLSF 317 (379)
T ss_dssp ETT--T--HHHHHHHHTT--TTS-EEEEEETT--GGGG
T ss_pred Ccc--cCChhhHHHHHHHhccCCCcEEEEECCCcCCCc
Confidence 774 2333333333332 24568889999999743
No 129
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.10 E-value=1e-08 Score=91.03 Aligned_cols=212 Identities=14% Similarity=0.031 Sum_probs=112.7
Q ss_pred CceEEEEcCcCCC--chhhH-HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGE--IRNSF-KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 93 ~p~vv~lHG~~~~--~~~~~-~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
.|+||++||++.. +.... ..+...+...|+.|+.+|+|- - |...| +. .+++..+.+.
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrl-------------a-----Pe~~~-p~-~~~d~~~a~~ 138 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRL-------------A-----PEHPF-PA-ALEDAYAAYR 138 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCC-------------C-----CCCCC-Cc-hHHHHHHHHH
Confidence 4799999998743 12334 444555666799999999998 2 22222 11 2333333333
Q ss_pred HHHHH---hC--CccEEEEEeChhHHHHHHHHHhCCc----ccceeeEeccCCCCCchhHHHHHHhHhccCCChhh-HHH
Q psy4974 170 ELLKL---LG--VCKVSLFGWCDGGHLSFVFSMKYPH----MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMA-RSE 239 (345)
Q Consensus 170 ~~l~~---~~--~~~i~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 239 (345)
.+.++ ++ .++|.++|+|.||.+++.++....+ ...+.+++.|...... ....+........+.... ...
T Consensus 139 ~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~~~~~~~~~~~~~~~~~~ 217 (312)
T COG0657 139 WLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASLPGYGEADLLDAAAILAW 217 (312)
T ss_pred HHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccchhhcCCccccCHHHHHHH
Confidence 33333 34 4589999999999999998876543 4788899998766543 111111111000011110 101
Q ss_pred HHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCC--hHHHHHHHhhcCCcEEEEeC
Q psy4974 240 VLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVS--TQQVQSLLNQLKFCQYYQFS 317 (345)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~--~~~~~~~~~~~~~~~~~~~~ 317 (345)
+...+......... ...... ....+.. -.|+++++|+.|.+.+ ...++++.+.-..+++..++
T Consensus 218 ~~~~~~~~~~~~~~-------------p~~spl-~~~~~~~-lPP~~i~~a~~D~l~~~~~~~a~~L~~agv~~~~~~~~ 282 (312)
T COG0657 218 FADLYLGAAPDRED-------------PEASPL-ASDDLSG-LPPTLIQTAEFDPLRDEGEAYAERLRAAGVPVELRVYP 282 (312)
T ss_pred HHHHhCcCccccCC-------------CccCcc-ccccccC-CCCEEEEecCCCcchhHHHHHHHHHHHcCCeEEEEEeC
Confidence 11111111000000 000000 0111233 3589999999999988 22334444443456889999
Q ss_pred CCCCcccccChH---HHHHHHHHHHH
Q psy4974 318 SGGHSCHIKHGQ---VFNEISRNFIL 340 (345)
Q Consensus 318 ~~gH~~~~~~~~---~~~~~i~~fl~ 340 (345)
++.|.+...... .....+.+|+.
T Consensus 283 g~~H~f~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 283 GMIHGFDLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred CcceeccccCcHHHHHHHHHHHHHHH
Confidence 999966443322 22345555555
No 130
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.09 E-value=9.8e-10 Score=90.31 Aligned_cols=104 Identities=14% Similarity=0.110 Sum_probs=74.7
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
|.|+|+||+.-.. ..|..++.+++.+||-|+++++-. - .. +...- .++...+.++++..-+.
T Consensus 47 PVilF~HG~~l~n-s~Ys~lL~HIASHGfIVVAPQl~~-------------~--~~-p~~~~-Ei~~aa~V~~WL~~gL~ 108 (307)
T PF07224_consen 47 PVILFLHGFNLYN-SFYSQLLAHIASHGFIVVAPQLYT-------------L--FP-PDGQD-EIKSAASVINWLPEGLQ 108 (307)
T ss_pred cEEEEeechhhhh-HHHHHHHHHHhhcCeEEEechhhc-------------c--cC-CCchH-HHHHHHHHHHHHHhhhh
Confidence 7999999998884 899999999999999999999855 2 21 22111 22233333344433333
Q ss_pred Hh-------CCccEEEEEeChhHHHHHHHHHhCC--cccceeeEeccCCCC
Q psy4974 174 LL-------GVCKVSLFGWCDGGHLSFVFSMKYP--HMVHKLVIWGTKSFL 215 (345)
Q Consensus 174 ~~-------~~~~i~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~ 215 (345)
.+ +..++.++|||.||-.|..+|..+. -.+.++|.++|....
T Consensus 109 ~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 109 HVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred hhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 32 2458999999999999999998763 248899999997664
No 131
>KOG2281|consensus
Probab=99.07 E-value=1.3e-09 Score=99.56 Aligned_cols=209 Identities=19% Similarity=0.221 Sum_probs=128.1
Q ss_pred CceEEEEcCcCCC--chhhHH--HH--HHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC--CCCCCCCCccchHHH
Q psy4974 93 AQVLFFTYGVLGE--IRNSFK--KQ--LTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL--PKGRSFVPFQYIEED 164 (345)
Q Consensus 93 ~p~vv~lHG~~~~--~~~~~~--~~--~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~--~~~~~~~~~~~~~~~ 164 (345)
-|+++++-|+++- ....|. .. ...|+..||.|+.+|-||+-+ .|.-- .-.... ..-.+++.
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~h----------RGlkFE~~ik~km-GqVE~eDQ 710 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAH----------RGLKFESHIKKKM-GQVEVEDQ 710 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccc----------cchhhHHHHhhcc-Ceeeehhh
Confidence 3899999999874 112232 22 356888999999999999211 01100 000011 22246777
Q ss_pred HHHHHHHHHHhC---CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHH
Q psy4974 165 VDIAYELLKLLG---VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVL 241 (345)
Q Consensus 165 ~~~~~~~l~~~~---~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
++.+.-+.++.| .++|.+-|||.||+++++...++|+-++..|.-+|......... ... .
T Consensus 711 Veglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDT--------------gYT---E 773 (867)
T KOG2281|consen 711 VEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDT--------------GYT---E 773 (867)
T ss_pred HHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecc--------------cch---h
Confidence 888888888775 46999999999999999999999987777776666543211000 000 0
Q ss_pred HHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc----CCcEEEEeC
Q psy4974 242 KAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL----KFCQYYQFS 317 (345)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~----~~~~~~~~~ 317 (345)
+.++.. ... ..-+....-....+.++.-+-..|++||--|.-|.......+.+.+ +..++.+||
T Consensus 774 RYMg~P----~~n--------E~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP 841 (867)
T KOG2281|consen 774 RYMGYP----DNN--------EHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFP 841 (867)
T ss_pred hhcCCC----ccc--------hhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEcc
Confidence 000000 000 0000000000113334444556899999999999877766666554 456999999
Q ss_pred CCCCcccc-cChHHHHHHHHHHHHh
Q psy4974 318 SGGHSCHI-KHGQVFNEISRNFILE 341 (345)
Q Consensus 318 ~~gH~~~~-~~~~~~~~~i~~fl~~ 341 (345)
+--|.+-. |...-....+..||++
T Consensus 842 ~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 842 NERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred ccccccCCCccchhHHHHHHHHHhh
Confidence 99998765 4456677788888875
No 132
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.05 E-value=4e-09 Score=88.09 Aligned_cols=153 Identities=19% Similarity=0.281 Sum_probs=97.8
Q ss_pred cCceEEEEEcCC-----CC---ceEEEEcCcCCCchhhHHHHHH-------hhCCCCeEEEEeCC-CCchhhhccCCccC
Q psy4974 80 KGCDIRFIKYGS-----GA---QVLFFTYGVLGEIRNSFKKQLT-------AFDPKLFTSIFWDP-PGNVVLYLLGKTCS 143 (345)
Q Consensus 80 ~g~~l~~~~~g~-----~~---p~vv~lHG~~~~~~~~~~~~~~-------~L~~~G~~vi~~D~-~G~~~~~~~g~~~~ 143 (345)
.|.++.|+.+-+ ++ |.+||+||.+..+......+.. ...+.++-|+++.+ +=
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~i------------ 237 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPI------------ 237 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccc------------
Confidence 567788876532 22 7899999998765344433322 22233456666663 22
Q ss_pred CCCCCCCCCCCCCCccchHHHHHHHH-HHHHHhCCc--cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH
Q psy4974 144 GYGQSLPKGRSFVPFQYIEEDVDIAY-ELLKLLGVC--KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV 220 (345)
Q Consensus 144 ~~G~s~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 220 (345)
+..++.. +........+.+. .+.++.+++ +|+++|.|+||+-++.++.++|+.+.+.+++++......
T Consensus 238 -f~d~e~~-----t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~--- 308 (387)
T COG4099 238 -FADSEEK-----TLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVY--- 308 (387)
T ss_pred -ccccccc-----cchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhh---
Confidence 2233221 1112333344444 344555555 899999999999999999999999999999988654100
Q ss_pred HHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHH
Q psy4974 221 RVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQ 300 (345)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~ 300 (345)
....+ -+.|+.++|+.+|+++|.+.
T Consensus 309 -----------------------------------------------------lv~~l--k~~piWvfhs~dDkv~Pv~n 333 (387)
T COG4099 309 -----------------------------------------------------LVRTL--KKAPIWVFHSSDDKVIPVSN 333 (387)
T ss_pred -----------------------------------------------------hhhhh--ccCceEEEEecCCCccccCc
Confidence 01111 25799999999999999877
Q ss_pred HHHHHhhc
Q psy4974 301 VQSLLNQL 308 (345)
Q Consensus 301 ~~~~~~~~ 308 (345)
++-+.+.+
T Consensus 334 Srv~y~~l 341 (387)
T COG4099 334 SRVLYERL 341 (387)
T ss_pred ceeehHHH
Confidence 66655554
No 133
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.04 E-value=9e-08 Score=88.82 Aligned_cols=125 Identities=19% Similarity=0.252 Sum_probs=80.9
Q ss_pred eeeeEEEc----CceEEEEEcC-----CCCceEEEEcCcCCCchhhHHHHHH------------------hhCCCCeEEE
Q psy4974 73 TEGFFSIK----GCDIRFIKYG-----SGAQVLFFTYGVLGEIRNSFKKQLT------------------AFDPKLFTSI 125 (345)
Q Consensus 73 ~~~~~~~~----g~~l~~~~~g-----~~~p~vv~lHG~~~~~~~~~~~~~~------------------~L~~~G~~vi 125 (345)
...++.++ +..++|.-.. ...|.||+++|++|++ ..+-.+.+ .+.+. ..++
T Consensus 48 ~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~s-s~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l 125 (462)
T PTZ00472 48 WSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCS-SMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVI 125 (462)
T ss_pred eeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHH-HHHhhhccCCCeEEeCCCCceeECCcccccc-cCeE
Confidence 36778874 3566665432 2348999999999985 44422210 12223 6789
Q ss_pred EeCCC-CchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh-------CCccEEEEEeChhHHHHHHHHH
Q psy4974 126 FWDPP-GNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLL-------GVCKVSLFGWCDGGHLSFVFSM 197 (345)
Q Consensus 126 ~~D~~-G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~i~lvGhS~Gg~ia~~~a~ 197 (345)
.+|.| | +|.|......+ ..+.++.++++.++++.+ ...+++|+|||+||.++..+|.
T Consensus 126 ~iDqP~G-------------~G~S~~~~~~~--~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~ 190 (462)
T PTZ00472 126 YVDQPAG-------------VGFSYADKADY--DHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAY 190 (462)
T ss_pred EEeCCCC-------------cCcccCCCCCC--CCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHH
Confidence 99975 7 77775433322 123456677777776643 3469999999999999888876
Q ss_pred hC----------CcccceeeEeccCCC
Q psy4974 198 KY----------PHMVHKLVIWGTKSF 214 (345)
Q Consensus 198 ~~----------p~~v~~lvl~~~~~~ 214 (345)
+. .-.++++++-++...
T Consensus 191 ~i~~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 191 RINMGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred HHHhhccccCCceeeeEEEEEeccccC
Confidence 52 124788888887543
No 134
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.04 E-value=4.4e-09 Score=88.10 Aligned_cols=104 Identities=18% Similarity=0.131 Sum_probs=69.0
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhC--------CCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccc-hHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFD--------PKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQY-IEED 164 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~--------~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~-~~~~ 164 (345)
.+|||+||.+|+ ...|+.+...+. ...++++++|+.. ....- ... .+.. .+..
T Consensus 5 ~pVlFIhG~~Gs-~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~-------------~~s~~-~g~---~l~~q~~~~ 66 (225)
T PF07819_consen 5 IPVLFIHGNAGS-YKQVRSLASELQRKALLNDNSSHFDFFTVDFNE-------------ELSAF-HGR---TLQRQAEFL 66 (225)
T ss_pred CEEEEECcCCCC-HhHHHHHHHHHhhhhhhccCccceeEEEeccCc-------------ccccc-ccc---cHHHHHHHH
Confidence 599999999999 488877765552 1248899999877 32110 111 1111 1222
Q ss_pred HHHHHHHHHHh-----CCccEEEEEeChhHHHHHHHHHhCC---cccceeeEeccCCCC
Q psy4974 165 VDIAYELLKLL-----GVCKVSLFGWCDGGHLSFVFSMKYP---HMVHKLVIWGTKSFL 215 (345)
Q Consensus 165 ~~~~~~~l~~~-----~~~~i~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~ 215 (345)
.+.+..+++.+ +.++++||||||||.+|..++...+ +.|+.+|.++++...
T Consensus 67 ~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 67 AEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred HHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCC
Confidence 33444555555 4569999999999999988876543 479999999987653
No 135
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.02 E-value=3.9e-10 Score=97.96 Aligned_cols=205 Identities=15% Similarity=0.060 Sum_probs=111.5
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCC---CCCccchHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRS---FVPFQYIEEDVDIAYE 170 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~---~~~~~~~~~~~~~~~~ 170 (345)
|.|++-||.++. ...|..+++.|++.||.|.++|.|| +..|........ | ....+.+...++..
T Consensus 72 PlvvlshG~Gs~-~~~f~~~A~~lAs~Gf~Va~~~hpg-----------s~~~~~~~~~~~~~~~-~p~~~~erp~dis~ 138 (365)
T COG4188 72 PLVVLSHGSGSY-VTGFAWLAEHLASYGFVVAAPDHPG-----------SNAGGAPAAYAGPGSY-APAEWWERPLDISA 138 (365)
T ss_pred CeEEecCCCCCC-ccchhhhHHHHhhCceEEEeccCCC-----------cccccCChhhcCCccc-chhhhhcccccHHH
Confidence 789999999999 5999999999999999999999999 223333211110 1 11111122222222
Q ss_pred HHH-------------HhCCccEEEEEeChhHHHHHHHHHhCCcccceeeE--------eccCCCCCchhHHHHHHhHhc
Q psy4974 171 LLK-------------LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVI--------WGTKSFLTIDNVRVFEGMRRL 229 (345)
Q Consensus 171 ~l~-------------~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl--------~~~~~~~~~~~~~~~~~~~~~ 229 (345)
+++ ++...+|.++|||+||+.++.++....+-.....- ..+..... +... ...
T Consensus 139 lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~----~~l~--q~~ 212 (365)
T COG4188 139 LLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNG----RLLN--QCA 212 (365)
T ss_pred HHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcCh----hhhc--ccc
Confidence 222 22345899999999999999988765431111111 11111000 0000 000
Q ss_pred cCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH-HHHHHHhhc
Q psy4974 230 SNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ-QVQSLLNQL 308 (345)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~-~~~~~~~~~ 308 (345)
..+.. .....+... . .......-.......-...+.+++.|++++.|..|.+.|.. ........+
T Consensus 213 av~~~----~~~~~~rDp------r----iravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l 278 (365)
T COG4188 213 AVWLP----RQAYDLRDP------R----IRAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYL 278 (365)
T ss_pred ccccc----hhhhccccc------c----ceeeeeccCCcccccccccceeeecceeeecccccccCCcccccccccccC
Confidence 00000 000000000 0 00000000000011114456788999999999999977743 455556667
Q ss_pred CCc--EEEEeCCCCCcccccChHHH
Q psy4974 309 KFC--QYYQFSSGGHSCHIKHGQVF 331 (345)
Q Consensus 309 ~~~--~~~~~~~~gH~~~~~~~~~~ 331 (345)
++. -+..++++.|+.+++-.++.
T Consensus 279 ~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 279 PGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred CcchhheeecCCCccccccccCccc
Confidence 765 67788999999998766553
No 136
>KOG4627|consensus
Probab=98.99 E-value=5.2e-09 Score=82.80 Aligned_cols=183 Identities=15% Similarity=0.054 Sum_probs=110.3
Q ss_pred CCceEEEEcCcCCC--chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGE--IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 92 ~~p~vv~lHG~~~~--~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
..|..||+||+-.. .+......+..+.++||+|..++ ++.+..... -..++.+...-+.
T Consensus 66 ~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvg----------------Y~l~~q~ht---L~qt~~~~~~gv~ 126 (270)
T KOG4627|consen 66 QAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVG----------------YNLCPQVHT---LEQTMTQFTHGVN 126 (270)
T ss_pred CccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEec----------------cCcCccccc---HHHHHHHHHHHHH
Confidence 34699999996432 12333345556667789999986 455532210 1113334444444
Q ss_pred HHHHHhC-CccEEEEEeChhHHHHHHHHHh-CCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccC
Q psy4974 170 ELLKLLG-VCKVSLFGWCDGGHLSFVFSMK-YPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDND 247 (345)
Q Consensus 170 ~~l~~~~-~~~i~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
-+++... .+.+.+-|||.|+.+|+.+..+ +..+|.+++++++........ ... +..+
T Consensus 127 filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~--------~te-------------~g~d 185 (270)
T KOG4627|consen 127 FILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELS--------NTE-------------SGND 185 (270)
T ss_pred HHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHh--------CCc-------------cccc
Confidence 4455543 3467788999999999987765 345799999988865521100 000 0000
Q ss_pred CchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccC
Q psy4974 248 VNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKH 327 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 327 (345)
+. ...+..+. ...+ ...+..++.|+|++.|.+|.---.+..+.++..+..+++..+++.+|+-.+++
T Consensus 186 ---lg-Lt~~~ae~--------~Scd-l~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 186 ---LG-LTERNAES--------VSCD-LWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred ---cC-cccchhhh--------cCcc-HHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHHH
Confidence 00 00000000 0000 23355678999999999997555678888888888899999999999977654
No 137
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.95 E-value=7e-08 Score=80.08 Aligned_cols=201 Identities=12% Similarity=0.114 Sum_probs=112.9
Q ss_pred EEcCcC--CCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH-H
Q psy4974 98 FTYGVL--GEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK-L 174 (345)
Q Consensus 98 ~lHG~~--~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~-~ 174 (345)
++|+.+ ++ ...|..+...|... +.|+++|.+| ++.+..... +++..++.+...+. .
T Consensus 2 ~~~~~~~~~~-~~~~~~~~~~l~~~-~~v~~~~~~g-------------~~~~~~~~~------~~~~~~~~~~~~l~~~ 60 (212)
T smart00824 2 CFPSTAAPSG-PHEYARLAAALRGR-RDVSALPLPG-------------FGPGEPLPA------SADALVEAQAEAVLRA 60 (212)
T ss_pred ccCCCCCCCc-HHHHHHHHHhcCCC-ccEEEecCCC-------------CCCCCCCCC------CHHHHHHHHHHHHHHh
Confidence 456544 55 38899999999876 9999999999 876543321 45555655554433 3
Q ss_pred hCCccEEEEEeChhHHHHHHHHHhC---CcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchh
Q psy4974 175 LGVCKVSLFGWCDGGHLSFVFSMKY---PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYI 251 (345)
Q Consensus 175 ~~~~~i~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (345)
....+++++|||+||.++..++.+. ++.+.+++++++............ ......+.......
T Consensus 61 ~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~---- 126 (212)
T smart00824 61 AGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTYPPGDPAPEGWL----------PELLRGVFEREDSF---- 126 (212)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccCCCCCccchhhH----------HHHHHHHHhhhccc----
Confidence 3456899999999999999988863 456899998887543221110000 00000000000000
Q ss_pred hhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCC-ChHHHHHHHhhc-CCcEEEEeCCCCCcccc-cCh
Q psy4974 252 TGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMV-STQQVQSLLNQL-KFCQYYQFSSGGHSCHI-KHG 328 (345)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v-~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~-~~~ 328 (345)
..........+...+..... .....+.+|+.++.+++|... +......+.... ...+...++ ++|+.++ +++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~-g~H~~~~~~~~ 201 (212)
T smart00824 127 VPMDDARLTAMGAYLRLFGG----WTPGPVAAPTLLVRASEPLAEWPDEDPDGWRAHWPLPHTVVDVP-GDHFTMMEEHA 201 (212)
T ss_pred ccccchhhhHHHHHHHHhcc----CCCCCCCCCEEEEeccCCCCCCCCCCcccccCCCCCCceeEEcc-CchHHHHHHhH
Confidence 00000011111111111111 112356789999999998654 222223344433 356777887 7888764 556
Q ss_pred HHHHHHHHHH
Q psy4974 329 QVFNEISRNF 338 (345)
Q Consensus 329 ~~~~~~i~~f 338 (345)
..+.+.+..|
T Consensus 202 ~~~~~~~~~~ 211 (212)
T smart00824 202 AATARAVHDW 211 (212)
T ss_pred HHHHHHHHhh
Confidence 6666666655
No 138
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.90 E-value=2.7e-09 Score=88.85 Aligned_cols=148 Identities=13% Similarity=0.162 Sum_probs=67.1
Q ss_pred HHHHHHHHHHh---CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHH
Q psy4974 165 VDIAYELLKLL---GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVL 241 (345)
Q Consensus 165 ~~~~~~~l~~~---~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
.+...+++... ..++|.|+|.|.||-+|+.+|..+| .|+++|.++|.................+..+.......
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~-- 82 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKF-- 82 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG---
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhhc--
Confidence 34445555544 2358999999999999999999998 79999999986653211100000000000000000000
Q ss_pred HHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH-HHHHHHhhc-----C-CcEEE
Q psy4974 242 KAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ-QVQSLLNQL-----K-FCQYY 314 (345)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~-~~~~~~~~~-----~-~~~~~ 314 (345)
...... ... .+. ..... .........-.+.++++|+|+|.|++|.+.|.. .++.+.+++ + +.+++
T Consensus 83 ~~~~~~--~~~-~~~----~~~~~-~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l 154 (213)
T PF08840_consen 83 SWNEPG--LLR-SRY----AFELA-DDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHL 154 (213)
T ss_dssp EE-TTS---EE--TT-----B--T-TTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEE
T ss_pred eecCCc--cee-hhh----hhhcc-cccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEE
Confidence 000000 000 000 00000 000000111235578999999999999999854 444444433 2 46888
Q ss_pred EeCCCCCcc
Q psy4974 315 QFSSGGHSC 323 (345)
Q Consensus 315 ~~~~~gH~~ 323 (345)
.|+++||.+
T Consensus 155 ~Y~~aGH~i 163 (213)
T PF08840_consen 155 SYPGAGHLI 163 (213)
T ss_dssp EETTB-S--
T ss_pred EcCCCCcee
Confidence 999999985
No 139
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.89 E-value=1.4e-09 Score=89.77 Aligned_cols=91 Identities=11% Similarity=0.084 Sum_probs=55.7
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeE---EEEeCCCCchhhhccCCccCCCCCCCCCC-CCCCCccchHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFT---SIFWDPPGNVVLYLLGKTCSGYGQSLPKG-RSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~---vi~~D~~G~~~~~~~g~~~~~~G~s~~~~-~~~~~~~~~~~~~~~~~ 169 (345)
.||||+||.+++....|..+.+.|.++||. |+++++-. ........ ... ..++..+..+.+.
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~-------------~~~~~~~~~~~~-~~~~~~~l~~fI~ 67 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGS-------------GNGSPSVQNAHM-SCESAKQLRAFID 67 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S--------------CCHHTHHHHHHB--HHHHHHHHHHHH
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCC-------------CCCCCccccccc-chhhHHHHHHHHH
Confidence 389999999995469999999999999999 89999744 21111000 000 1122334555566
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHhC
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
+++..-+. +|.||||||||.++..+....
T Consensus 68 ~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 68 AVLAYTGA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHHHT---EEEEEETCHHHHHHHHHHHC
T ss_pred HHHHhhCC-EEEEEEcCCcCHHHHHHHHHc
Confidence 66777788 999999999999999887643
No 140
>KOG1553|consensus
Probab=98.81 E-value=1.1e-08 Score=87.05 Aligned_cols=103 Identities=19% Similarity=0.326 Sum_probs=71.6
Q ss_pred CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 91 SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
+|+..|||+-|..|-- +. - ....-.+.||.|+.+++|| ++.|...+.+. .+ ...++.+.+
T Consensus 241 ngq~LvIC~EGNAGFY-Ev-G-~m~tP~~lgYsvLGwNhPG-------------FagSTG~P~p~---n~-~nA~DaVvQ 300 (517)
T KOG1553|consen 241 NGQDLVICFEGNAGFY-EV-G-VMNTPAQLGYSVLGWNHPG-------------FAGSTGLPYPV---NT-LNAADAVVQ 300 (517)
T ss_pred CCceEEEEecCCccce-Ee-e-eecChHHhCceeeccCCCC-------------ccccCCCCCcc---cc-hHHHHHHHH
Confidence 4556788888876641 11 1 1122234589999999999 99997654332 22 223444444
Q ss_pred H-HHHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 171 L-LKLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 171 ~-l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
+ +..++. +.|+|.|||.||..+..+|..+|+ |+++|+-++...
T Consensus 301 fAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDD 346 (517)
T KOG1553|consen 301 FAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDD 346 (517)
T ss_pred HHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhh
Confidence 4 556664 589999999999999999999996 999999887544
No 141
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.76 E-value=5.7e-07 Score=76.63 Aligned_cols=214 Identities=14% Similarity=0.176 Sum_probs=121.1
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHH
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKL 174 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~ 174 (345)
|+|++-||.+..........+...+.|++++.+-.+- .....+. ..+...++.+.+.+..
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~-------------~~~~~~~-------~~~~~~~~~l~~~l~~ 60 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPP-------------ADFFWPS-------KRLAPAADKLLELLSD 60 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCH-------------HHHeeec-------cchHHHHHHHHHHhhh
Confidence 5778889988855555566665556889999987665 2111110 1344556666666665
Q ss_pred hCCc---cEEEEEeChhHHHHHHHHHh---------CC-cccceeeEeccCCCCCc-hhHHHHHHhHhccCCChh----h
Q psy4974 175 LGVC---KVSLFGWCDGGHLSFVFSMK---------YP-HMVHKLVIWGTKSFLTI-DNVRVFEGMRRLSNWSPM----A 236 (345)
Q Consensus 175 ~~~~---~i~lvGhS~Gg~ia~~~a~~---------~p-~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~ 236 (345)
.... ++.+-.+|.||...+..... .+ .+++++|+-+++..... .....+... +...... .
T Consensus 61 ~~~~~~~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 138 (240)
T PF05705_consen 61 SQSASPPPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAA--LPKSSPRWFVPL 138 (240)
T ss_pred hccCCCCCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHH--cCccchhhHHHH
Confidence 4433 79999999988766554331 11 24889998887755433 111111111 1111000 0
Q ss_pred HHHHHHHcccCCchhhhh---HHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----
Q psy4974 237 RSEVLKAYDNDVNYITGI---FNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK---- 309 (345)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~---- 309 (345)
.......+... ..... ...........+. ........+|-|+++++.|.+++.+..++..+...
T Consensus 139 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~ 209 (240)
T PF05705_consen 139 WPLLQFLLRLS--IISYFIFGYPDVQEYYRRALN-------DFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGW 209 (240)
T ss_pred HHHHHHHHHHH--HHHHHHhcCCcHHHHHHHHHh-------hhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCC
Confidence 00000000000 00000 0000011111111 11123456899999999999999988777766543
Q ss_pred CcEEEEeCCCCCcccc-cChHHHHHHHHHHH
Q psy4974 310 FCQYYQFSSGGHSCHI-KHGQVFNEISRNFI 339 (345)
Q Consensus 310 ~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl 339 (345)
+++...++++.|..|+ ++|++..+.+.+|+
T Consensus 210 ~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 210 DVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred eEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 3678889999999888 68999999999885
No 142
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.76 E-value=5e-08 Score=89.21 Aligned_cols=93 Identities=13% Similarity=0.055 Sum_probs=70.6
Q ss_pred hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeC
Q psy4974 107 RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWC 186 (345)
Q Consensus 107 ~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS 186 (345)
...|..+++.|.+.||.+ ..|++| +|.+.+..... ...++++.+.+.++.+..+.++++|+|||
T Consensus 107 ~~~~~~li~~L~~~GY~~-~~dL~g-------------~gYDwR~~~~~--~~~~~~Lk~lIe~~~~~~g~~kV~LVGHS 170 (440)
T PLN02733 107 VYYFHDMIEQLIKWGYKE-GKTLFG-------------FGYDFRQSNRL--PETMDGLKKKLETVYKASGGKKVNIISHS 170 (440)
T ss_pred HHHHHHHHHHHHHcCCcc-CCCccc-------------CCCCccccccH--HHHHHHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 489999999999999766 899999 99886543211 11234445555566666677899999999
Q ss_pred hhHHHHHHHHHhCCcc----cceeeEeccCCCC
Q psy4974 187 DGGHLSFVFSMKYPHM----VHKLVIWGTKSFL 215 (345)
Q Consensus 187 ~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~ 215 (345)
|||.++..++..+|+. |+++|+++++...
T Consensus 171 MGGlva~~fl~~~p~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 171 MGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred HhHHHHHHHHHHCCHhHHhHhccEEEECCCCCC
Confidence 9999999999888763 7899999876543
No 143
>KOG3847|consensus
Probab=98.75 E-value=6.5e-08 Score=81.53 Aligned_cols=184 Identities=13% Similarity=0.095 Sum_probs=106.9
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCC--C---CCC-------CCCCCCCCcc--
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGY--G---QSL-------PKGRSFVPFQ-- 159 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~--G---~s~-------~~~~~~~~~~-- 159 (345)
|.+||-||++++ +..|..+...|+.+||-|.+++.|-++-. +-...-..| + .+. ..+..+ .+.
T Consensus 119 PvvvFSHGLggs-Rt~YSa~c~~LAShG~VVaavEHRD~SA~-~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef-~irNe 195 (399)
T KOG3847|consen 119 PVVVFSHGLGGS-RTLYSAYCTSLASHGFVVAAVEHRDRSAC-WTYVLKEKHENEPLVEQWIKIRLVEANEKEF-HIRNE 195 (399)
T ss_pred cEEEEecccccc-hhhHHHHhhhHhhCceEEEEeecccCcce-eEEEecccccCCcccccceEeeeeccCceeE-EeeCH
Confidence 899999999999 69999999999999999999999882110 000000000 0 000 000001 000
Q ss_pred chH---HHHHHHHHHHHHhC------------------------CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccC
Q psy4974 160 YIE---EDVDIAYELLKLLG------------------------VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTK 212 (345)
Q Consensus 160 ~~~---~~~~~~~~~l~~~~------------------------~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 212 (345)
... +.+..+..++++++ -.++.++|||+||..++...+.+ .+++..|+++..
T Consensus 196 qv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~lD~W 274 (399)
T KOG3847|consen 196 QVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIALDAW 274 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeeeeeee
Confidence 011 11222233343321 12688999999999988877665 458888888875
Q ss_pred CCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCC
Q psy4974 213 SFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSAD 292 (345)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~ 292 (345)
..+-. .....+++.|+++|.-++
T Consensus 275 M~Pl~---------------------------------------------------------~~~~~~arqP~~finv~~ 297 (399)
T KOG3847|consen 275 MFPLD---------------------------------------------------------QLQYSQARQPTLFINVED 297 (399)
T ss_pred ecccc---------------------------------------------------------hhhhhhccCCeEEEEccc
Confidence 44210 222345677999988432
Q ss_pred CCCCChHHHHHHHh---hcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 293 DVMVSTQQVQSLLN---QLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 293 D~~v~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
+--.+....+.+ ...+..++.+.|+=|-.+-+.|-.+-++|.++|.
T Consensus 298 --fQ~~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~ 346 (399)
T KOG3847|consen 298 --FQWNENLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWIGKVFK 346 (399)
T ss_pred --ccchhHHHHHHhhhCCCccceEEEEccceecccccCccccHHHHHHHhc
Confidence 222233333333 3334577888888887666666555555555553
No 144
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.75 E-value=5.6e-08 Score=85.34 Aligned_cols=105 Identities=11% Similarity=0.075 Sum_probs=58.7
Q ss_pred ceEEEEcCcCCCchhh--------------H----HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCC
Q psy4974 94 QVLFFTYGVLGEIRNS--------------F----KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSF 155 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~--------------~----~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~ 155 (345)
|.||++||-++.. +. + ..+...|+++||.|+++|.+| +|+........
T Consensus 116 PAVL~lHgHg~~K-e~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g-------------~GER~~~e~~~ 181 (390)
T PF12715_consen 116 PAVLCLHGHGGGK-EKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALG-------------FGERGDMEGAA 181 (390)
T ss_dssp EEEEEE--TT--H-HHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TT-------------SGGG-SSCCCT
T ss_pred CEEEEeCCCCCCc-ccccCCcccccccchhhccccccHHHHHHhCCCEEEEEcccc-------------ccccccccccc
Confidence 7999999977652 22 1 235678999999999999999 98875433211
Q ss_pred CC-ccchHHH---------------HHHHHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCC
Q psy4974 156 VP-FQYIEED---------------VDIAYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKS 213 (345)
Q Consensus 156 ~~-~~~~~~~---------------~~~~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 213 (345)
.. ..+.... +-+....++.+ ..++|.++|+||||..++.+|+.. ++|++.|..+-..
T Consensus 182 ~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l~ 260 (390)
T PF12715_consen 182 QGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYLC 260 (390)
T ss_dssp TTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B-
T ss_pred cccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhhh
Confidence 00 0011111 11122233333 235899999999999999999887 5788888766543
No 145
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.74 E-value=1.9e-06 Score=74.29 Aligned_cols=88 Identities=15% Similarity=0.090 Sum_probs=55.8
Q ss_pred ceEEEEcCcCCCchhhH-------HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSF-------KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVD 166 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~-------~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~ 166 (345)
.-|++.-|.++.- +.. ..+.+...+.|.+|+.+++|| .|.|..... ..++....+
T Consensus 138 RWiL~s~GNg~~~-E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpG-------------Vg~S~G~~s----~~dLv~~~~ 199 (365)
T PF05677_consen 138 RWILVSNGNGECY-ENRAMLDYKDDWIQRFAKELGANVLVFNYPG-------------VGSSTGPPS----RKDLVKDYQ 199 (365)
T ss_pred cEEEEEcCChHHh-hhhhhhccccHHHHHHHHHcCCcEEEECCCc-------------cccCCCCCC----HHHHHHHHH
Confidence 4788888877662 330 122233333478999999999 999965542 123333334
Q ss_pred HHHHHHHH--hC--CccEEEEEeChhHHHHHHHHHhC
Q psy4974 167 IAYELLKL--LG--VCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 167 ~~~~~l~~--~~--~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
.+.+++.. .| .+.+++.|||+||.++..++.++
T Consensus 200 a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 200 ACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 44444432 12 35899999999999988866654
No 146
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.73 E-value=9.3e-07 Score=77.17 Aligned_cols=59 Identities=19% Similarity=0.316 Sum_probs=41.8
Q ss_pred CCCCEEEEEeCCCCCCChHHHHHHHhhc-----CCcEEEEeCCCCCcccc-cChHHHHHHHHHHH
Q psy4974 281 VDVPVLVFHSADDVMVSTQQVQSLLNQL-----KFCQYYQFSSGGHSCHI-KHGQVFNEISRNFI 339 (345)
Q Consensus 281 i~~Pvl~i~G~~D~~v~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl 339 (345)
.+.|+++.+|..|.++|....+.+.+.+ .++++..+++.+|.... .......++|.+-|
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf 282 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRF 282 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHH
Confidence 3689999999999999988777776554 35788888999997643 22333334444444
No 147
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.72 E-value=5.1e-07 Score=74.10 Aligned_cols=210 Identities=16% Similarity=0.092 Sum_probs=114.5
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCC-----eEEEEeCCCCchhhhccCCccCCCCCCCCCCCCC--C-CccchHHHHH
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKL-----FTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSF--V-PFQYIEEDVD 166 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G-----~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~--~-~~~~~~~~~~ 166 (345)
|.|||||.+|+. .+...++..|.+.+ --++.+|--| -+...|+. --.+..|--.+ + ...+..++..
T Consensus 47 PTIfIhGsgG~a-sS~~~Mv~ql~~~~~~~~e~Lt~~V~~dg--slk~tGk~---~Kd~~nP~I~~gfe~n~~s~~~~s~ 120 (288)
T COG4814 47 PTIFIHGSGGTA-SSLNGMVNQLLPDYKAGTESLTMTVDVDG--SLKVTGKI---SKDAKNPIIEFGFEDNTASGLDQSK 120 (288)
T ss_pred ceEEEecCCCCh-hHHHHHHHHhhhcccccccceEEEEcCCC--cEEEeeee---cccCCCCeEEEEEecCcCchhhHHH
Confidence 899999999995 99999998888763 2355566555 34444544 11111111100 0 1112333344
Q ss_pred HHHHH----HHHhCCccEEEEEeChhHHHHHHHHHhCCc-----ccceeeEeccCCCCCchhHHHHHHhHhccCCChh-h
Q psy4974 167 IAYEL----LKLLGVCKVSLFGWCDGGHLSFVFSMKYPH-----MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPM-A 236 (345)
Q Consensus 167 ~~~~~----l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 236 (345)
++..+ -++.+++++.++||||||.-...|+..+.. .+.++|.++++....... .-+.+..+..-.+. .
T Consensus 121 wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~--~de~v~~v~~~~~~~~ 198 (288)
T COG4814 121 WLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLV--PDETVTDVLKDGPGLI 198 (288)
T ss_pred HHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccC--CCcchheeeccCcccc
Confidence 44433 345678899999999999988888876531 489999998866511000 00000000000000 0
Q ss_pred HHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCC------CCCCChHHHHHHHhhcCC
Q psy4974 237 RSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSAD------DVMVSTQQVQSLLNQLKF 310 (345)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~------D~~v~~~~~~~~~~~~~~ 310 (345)
...... .+... ...+ .-+..+|+|.|+- |..||...+..+...+++
T Consensus 199 ~t~y~~------------------y~~~n---------~k~v-~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~ 250 (288)
T COG4814 199 KTPYYD------------------YIAKN---------YKKV-SPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKK 250 (288)
T ss_pred CcHHHH------------------HHHhc---------ceeC-CCCcEEEEEecccccCCcCCCceechHhHHHHHHhcc
Confidence 000000 00000 0111 1246799999985 456777766666665542
Q ss_pred ---c-E--EEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 311 ---C-Q--YYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 311 ---~-~--~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+ . +..=+++.|.-+.|+| .+.+.+..||-+
T Consensus 251 ~~ksy~e~~~~Gk~a~Hs~lhen~-~v~~yv~~FLw~ 286 (288)
T COG4814 251 NGKSYIESLYKGKDARHSKLHENP-TVAKYVKNFLWE 286 (288)
T ss_pred CcceeEEEeeeCCcchhhccCCCh-hHHHHHHHHhhc
Confidence 2 1 2233458898877765 455777888754
No 148
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.65 E-value=3.6e-07 Score=76.94 Aligned_cols=132 Identities=16% Similarity=0.170 Sum_probs=86.1
Q ss_pred eeeEEEcCceEEEEEcC-----CCCceEEEEcCcCCCchhhHHHHH--HhhCC-CCeEEEEeC-CCCchhhhccCCccCC
Q psy4974 74 EGFFSIKGCDIRFIKYG-----SGAQVLFFTYGVLGEIRNSFKKQL--TAFDP-KLFTSIFWD-PPGNVVLYLLGKTCSG 144 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g-----~~~p~vv~lHG~~~~~~~~~~~~~--~~L~~-~G~~vi~~D-~~G~~~~~~~g~~~~~ 144 (345)
...+.++|....|..+- +++|.||++||..++. ..+.... +.|++ +||-|+.+| ++++-+.--|++.
T Consensus 37 ~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sg-ag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~--- 112 (312)
T COG3509 37 VASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSG-AGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNW--- 112 (312)
T ss_pred ccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCCh-HHhhcccchhhhhcccCcEEECcCccccccCCCccccc---
Confidence 34456677666665442 3447999999999984 5544433 44444 489999996 3331112223333
Q ss_pred CCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCC
Q psy4974 145 YGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKS 213 (345)
Q Consensus 145 ~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 213 (345)
+|.++... ..+....+.+.+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 113 ~~p~~~~~----g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 113 FGPADRRR----GVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CCcccccC----CccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 33332121 3334444455556667777777 89999999999999999999999999998887754
No 149
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.63 E-value=7.5e-08 Score=85.18 Aligned_cols=106 Identities=10% Similarity=0.042 Sum_probs=62.9
Q ss_pred CCCceEEEEcCcCCCc-hhhHHH-HHH-hhCC--CCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC-CccchHHH
Q psy4974 91 SGAQVLFFTYGVLGEI-RNSFKK-QLT-AFDP--KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV-PFQYIEED 164 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~-~~~~~~-~~~-~L~~--~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~-~~~~~~~~ 164 (345)
..+|++|++|||.++. ...|.. +.+ .|.. .+++|+++|+.. . .+ ..|. ........
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~-------------~-a~----~~Y~~a~~n~~~v 130 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSR-------------G-AS----NNYPQAVANTRLV 130 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HH-------------H-HS----S-HHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchh-------------h-cc----ccccchhhhHHHH
Confidence 4568999999999885 345644 444 4555 469999999855 2 11 1120 01112222
Q ss_pred HHHHHHHHH----Hh--CCccEEEEEeChhHHHHHHHHHhCCc--ccceeeEeccCCC
Q psy4974 165 VDIAYELLK----LL--GVCKVSLFGWCDGGHLSFVFSMKYPH--MVHKLVIWGTKSF 214 (345)
Q Consensus 165 ~~~~~~~l~----~~--~~~~i~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 214 (345)
.+.+..++. .. ..++++|||||+||.+|-.++..... +|.++..++|+..
T Consensus 131 g~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 131 GRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp HHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred HHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 233333332 33 35699999999999999999988776 8999999999765
No 150
>KOG3253|consensus
Probab=98.60 E-value=8.1e-07 Score=81.26 Aligned_cols=158 Identities=15% Similarity=0.098 Sum_probs=104.7
Q ss_pred CceEEEEcCcCC----Cc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 93 AQVLFFTYGVLG----EI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 93 ~p~vv~lHG~~~----~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
.|.++++||.+. +. .+.|........+. ..|.++|++. + .|. . .+...++.
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gev-vev~tfdl~n---------~---igG-------~----nI~h~ae~ 231 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEV-VEVPTFDLNN---------P---IGG-------A----NIKHAAEY 231 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhcee-eeeccccccC---------C---CCC-------c----chHHHHHH
Confidence 368899999881 11 23444455444444 7788888876 0 121 1 33334444
Q ss_pred HHHHHH--------HhCCccEEEEEeChhHHHHHHHHHhCC-cccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHH
Q psy4974 168 AYELLK--------LLGVCKVSLFGWCDGGHLSFVFSMKYP-HMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARS 238 (345)
Q Consensus 168 ~~~~l~--------~~~~~~i~lvGhS~Gg~ia~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (345)
+..+.+ ++...+|+|+|+|||+.++.+.+.... ..|+++|+++-+........
T Consensus 232 ~vSf~r~kvlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr------------------ 293 (784)
T KOG3253|consen 232 SVSFDRYKVLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR------------------ 293 (784)
T ss_pred HHHHhhhhhhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc------------------
Confidence 444433 234568999999999888888776543 34889998875443211100
Q ss_pred HHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC-CcEEEEeC
Q psy4974 239 EVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK-FCQYYQFS 317 (345)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~ 317 (345)
....+.+-.++.|+|++.|.+|..+++...++++++.. ..+++++.
T Consensus 294 ---------------------------------girDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~ 340 (784)
T KOG3253|consen 294 ---------------------------------GIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIG 340 (784)
T ss_pred ---------------------------------CCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEec
Confidence 00023345678899999999999999999999998874 57899999
Q ss_pred CCCCcccc
Q psy4974 318 SGGHSCHI 325 (345)
Q Consensus 318 ~~gH~~~~ 325 (345)
+++|.+-.
T Consensus 341 ~adhsmai 348 (784)
T KOG3253|consen 341 GADHSMAI 348 (784)
T ss_pred CCCccccC
Confidence 99998754
No 151
>KOG4840|consensus
Probab=98.60 E-value=2e-06 Score=69.20 Aligned_cols=102 Identities=13% Similarity=0.049 Sum_probs=75.6
Q ss_pred ceEEEEcCcCCC--chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGE--IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 94 p~vv~lHG~~~~--~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
-.|||+-|++.. ....-..+..+|.+.+|.++-+.++. + ...| ...++.+.++++..+
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~S-------------s------y~G~-Gt~slk~D~edl~~l 96 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRS-------------S------YNGY-GTFSLKDDVEDLKCL 96 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccc-------------c------cccc-ccccccccHHHHHHH
Confidence 478888888765 22445667889999999999998876 1 1112 223677779999999
Q ss_pred HHHhCC----ccEEEEEeChhHHHHHHHHHh--CCcccceeeEeccCCCC
Q psy4974 172 LKLLGV----CKVSLFGWCDGGHLSFVFSMK--YPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 172 l~~~~~----~~i~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~ 215 (345)
+++++. .+|+|+|||.|+.-.++|..+ .+..+++.|+.+|....
T Consensus 97 ~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 97 LEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred HHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 997753 289999999999888887743 35678889999887653
No 152
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.59 E-value=1.4e-05 Score=72.66 Aligned_cols=56 Identities=21% Similarity=0.355 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHHHHh---C--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 160 YIEEDVDIAYELLKLL---G--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 160 ~~~~~~~~~~~~l~~~---~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
++++.+....++++.+ . ..+.+|+|-|.||+.++.+|+.+|+.+.-+|+-+++...
T Consensus 117 Tl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsy 177 (581)
T PF11339_consen 117 TLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSY 177 (581)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccc
Confidence 5666666555555554 1 238999999999999999999999999888888775543
No 153
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.58 E-value=1.3e-05 Score=74.23 Aligned_cols=127 Identities=14% Similarity=0.144 Sum_probs=77.0
Q ss_pred eeeeEEEc---CceEEEEEcC-----CCCceEEEEcCcCCCchhhHHHHHHh-------------------hCCCCeEEE
Q psy4974 73 TEGFFSIK---GCDIRFIKYG-----SGAQVLFFTYGVLGEIRNSFKKQLTA-------------------FDPKLFTSI 125 (345)
Q Consensus 73 ~~~~~~~~---g~~l~~~~~g-----~~~p~vv~lHG~~~~~~~~~~~~~~~-------------------L~~~G~~vi 125 (345)
...++.++ +..++|.-.. +.+|.||++.|++|++ ..+-.+.+. +.+. .+++
T Consensus 12 ~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~S-S~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l 89 (415)
T PF00450_consen 12 YSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCS-SMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLL 89 (415)
T ss_dssp EEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB--THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEE
T ss_pred EEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceec-cccccccccCceEEeecccccccccccccccc-cceE
Confidence 35677776 5677765432 2448999999999986 666433210 1122 6789
Q ss_pred EeCCC-CchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh-------CCccEEEEEeChhHHHHHHHHH
Q psy4974 126 FWDPP-GNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLL-------GVCKVSLFGWCDGGHLSFVFSM 197 (345)
Q Consensus 126 ~~D~~-G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~i~lvGhS~Gg~ia~~~a~ 197 (345)
.+|.| | .|.|......- ...+.++.++++.+++..+ ...+++|.|-|.||..+..+|.
T Consensus 90 ~iD~PvG-------------tGfS~~~~~~~-~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~ 155 (415)
T PF00450_consen 90 FIDQPVG-------------TGFSYGNDPSD-YVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALAS 155 (415)
T ss_dssp EE--STT-------------STT-EESSGGG-GS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHH
T ss_pred EEeecCc-------------eEEeecccccc-ccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHH
Confidence 99955 7 77775433221 1224566677777666654 3458999999999988777665
Q ss_pred h----C------CcccceeeEeccCCCC
Q psy4974 198 K----Y------PHMVHKLVIWGTKSFL 215 (345)
Q Consensus 198 ~----~------p~~v~~lvl~~~~~~~ 215 (345)
. . +-.++++++.++....
T Consensus 156 ~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 156 YILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred hhhhccccccccccccccceecCccccc
Confidence 3 2 2358899998886654
No 154
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.49 E-value=2.7e-05 Score=68.59 Aligned_cols=216 Identities=11% Similarity=0.023 Sum_probs=118.7
Q ss_pred eeeEEEcCceEE--EEEcCCCC--ceEEEEcCcCCCch--hhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCcc-----
Q psy4974 74 EGFFSIKGCDIR--FIKYGSGA--QVLFFTYGVLGEIR--NSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTC----- 142 (345)
Q Consensus 74 ~~~~~~~g~~l~--~~~~g~~~--p~vv~lHG~~~~~~--~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~----- 142 (345)
..++..++.++- |+.+..++ -.||++||.+.+.. ..-..+...|.+.|++.+++.+|.-...+.-....
T Consensus 64 ~~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~ 143 (310)
T PF12048_consen 64 VQWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEV 143 (310)
T ss_pred cEEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCC
Confidence 344555444332 33333332 38999999988731 33455667888999999999887700000000000
Q ss_pred CCCCCC--CCCCCC-----------CC-CccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCc-ccceee
Q psy4974 143 SGYGQS--LPKGRS-----------FV-PFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH-MVHKLV 207 (345)
Q Consensus 143 ~~~G~s--~~~~~~-----------~~-~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~-~v~~lv 207 (345)
..-+.. +.+... +. ....+....+.+.+++...+..+++|+||+.|+..++.+....+. .++++|
T Consensus 144 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV 223 (310)
T PF12048_consen 144 PSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALV 223 (310)
T ss_pred CCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEE
Confidence 000000 000000 00 000111223334444555566679999999999999998888753 589999
Q ss_pred EeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEE
Q psy4974 208 IWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLV 287 (345)
Q Consensus 208 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~ 287 (345)
++++........ ..+.+.+.++++|||=
T Consensus 224 ~I~a~~p~~~~n----------------------------------------------------~~l~~~la~l~iPvLD 251 (310)
T PF12048_consen 224 LINAYWPQPDRN----------------------------------------------------PALAEQLAQLKIPVLD 251 (310)
T ss_pred EEeCCCCcchhh----------------------------------------------------hhHHHHhhccCCCEEE
Confidence 999965532110 1113345667899999
Q ss_pred EEeCCCCCCChH--HHHHHHhhc--CCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 288 FHSADDVMVSTQ--QVQSLLNQL--KFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 288 i~G~~D~~v~~~--~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
|++.....+-.. .-+...++. ++.+...+.+..|...- ..+.+.+.|..||+.+
T Consensus 252 i~~~~~~~~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~-~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 252 IYSADNPASQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSG-WQEQLLRRIRGWLKRH 309 (310)
T ss_pred EecCCChHHHHHHHHHHHHHHhccCCCceeEecCCCCCChhh-HHHHHHHHHHHHHHhh
Confidence 998873322211 112222222 24566667666664432 2334889999999864
No 155
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.46 E-value=4e-06 Score=76.69 Aligned_cols=105 Identities=8% Similarity=0.009 Sum_probs=64.2
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCC----eEEEEeCCCCchhhhccCCccCCC-CCCCCCCCCCCCccchHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKL----FTSIFWDPPGNVVLYLLGKTCSGY-GQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G----~~vi~~D~~G~~~~~~~g~~~~~~-G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
-|+|+++||............+..|.++| ..++.+|... . .++. .-.. .......++++
T Consensus 209 ~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~-------------~~~R~~--el~~-~~~f~~~l~~e 272 (411)
T PRK10439 209 RPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAID-------------TTHRSQ--ELPC-NADFWLAVQQE 272 (411)
T ss_pred CCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCC-------------cccccc--cCCc-hHHHHHHHHHH
Confidence 37899999954321111223444554444 4567887533 1 1110 0000 11122334566
Q ss_pred HHHHHHHh-----CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCC
Q psy4974 168 AYELLKLL-----GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKS 213 (345)
Q Consensus 168 ~~~~l~~~-----~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 213 (345)
+.-++++. +.++.+|+|+||||..|+.++.++|+.+.+++.+++..
T Consensus 273 LlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 273 LLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 66666553 23478999999999999999999999999999999864
No 156
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.42 E-value=2.5e-06 Score=71.94 Aligned_cols=106 Identities=11% Similarity=0.134 Sum_probs=64.8
Q ss_pred CCceEEEEcCcCCCchhhHHH---HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKK---QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
.+..+||+||+..+....... +...+.-. -.++.+.+|+ .|.-.. -.. +......-...+
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~-~~~i~FsWPS-------------~g~~~~--Y~~-d~~~a~~s~~~l 79 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFP-GVVILFSWPS-------------DGSLLG--YFY-DRESARFSGPAL 79 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCC-ceEEEEEcCC-------------CCChhh--hhh-hhhhHHHHHHHH
Confidence 446999999998883222222 33333333 3899999999 654211 000 111222334444
Q ss_pred HHHHHHh----CCccEEEEEeChhHHHHHHHHHhC----C-----cccceeeEeccCCC
Q psy4974 169 YELLKLL----GVCKVSLFGWCDGGHLSFVFSMKY----P-----HMVHKLVIWGTKSF 214 (345)
Q Consensus 169 ~~~l~~~----~~~~i~lvGhS~Gg~ia~~~a~~~----p-----~~v~~lvl~~~~~~ 214 (345)
.+++..+ +.++|+|++||||+.+.+.+.... + .++..+|+++|-..
T Consensus 80 ~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 80 ARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred HHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 4444443 567999999999999988876541 1 25778888887554
No 157
>COG3150 Predicted esterase [General function prediction only]
Probab=98.39 E-value=2.1e-05 Score=60.60 Aligned_cols=89 Identities=15% Similarity=0.126 Sum_probs=60.0
Q ss_pred EEEEcCcCCCchhhHHHH--HHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 96 LFFTYGVLGEIRNSFKKQ--LTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 96 vv~lHG~~~~~~~~~~~~--~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
|+++||+.+|+ ...... .+.+.+. .. - .+.+.+.... +....++.+..++.
T Consensus 2 ilYlHGFnSSP-~shka~l~~q~~~~~-~~-------~-------------i~y~~p~l~h-----~p~~a~~ele~~i~ 54 (191)
T COG3150 2 ILYLHGFNSSP-GSHKAVLLLQFIDED-VR-------D-------------IEYSTPHLPH-----DPQQALKELEKAVQ 54 (191)
T ss_pred eEEEecCCCCc-ccHHHHHHHHHHhcc-cc-------c-------------eeeecCCCCC-----CHHHHHHHHHHHHH
Confidence 79999999985 555443 2444443 22 2 2222221111 45667888888898
Q ss_pred HhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 174 LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 174 ~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
..+.+...|+|-|+||+.|..++.++. +++ |+++|...
T Consensus 55 ~~~~~~p~ivGssLGGY~At~l~~~~G--ira-v~~NPav~ 92 (191)
T COG3150 55 ELGDESPLIVGSSLGGYYATWLGFLCG--IRA-VVFNPAVR 92 (191)
T ss_pred HcCCCCceEEeecchHHHHHHHHHHhC--Chh-hhcCCCcC
Confidence 888778999999999999999999875 444 45566544
No 158
>KOG3101|consensus
Probab=98.36 E-value=1.6e-06 Score=69.23 Aligned_cols=197 Identities=16% Similarity=0.205 Sum_probs=103.6
Q ss_pred CceEEEEcCcCCCchhhHHH---HHHhhCCCCeEEEEeCC--CCchhhhccCCc-cCCCCCCC-----CCCCCCC-Cccc
Q psy4974 93 AQVLFFTYGVLGEIRNSFKK---QLTAFDPKLFTSIFWDP--PGNVVLYLLGKT-CSGYGQSL-----PKGRSFV-PFQY 160 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~---~~~~L~~~G~~vi~~D~--~G~~~~~~~g~~-~~~~G~s~-----~~~~~~~-~~~~ 160 (345)
-|++.++.|+.+.. ..|.. +-+.-+++|+.|+++|- || +-..|-. +-.+|.-. ...++|. ...-
T Consensus 44 ~P~lf~LSGLTCT~-~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG---~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrM 119 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTH-ENFIEKSGFQQQASKHGLAVVAPDTSPRG---VEVAGDDESWDFGQGAGFYVNATQEPWAKHYRM 119 (283)
T ss_pred CceEEEecCCcccc-hhhHhhhhHHHhHhhcCeEEECCCCCCCc---cccCCCcccccccCCceeEEecccchHhhhhhH
Confidence 38999999999884 55533 22344567999999994 44 1111110 00011100 0001110 0011
Q ss_pred hHHHHHHHHHHHHH----hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhh
Q psy4974 161 IEEDVDIAYELLKL----LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMA 236 (345)
Q Consensus 161 ~~~~~~~~~~~l~~----~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (345)
++-.++.+.+++.. +...++.|.||||||.=|+..+.+.|.+.+.+-..+|...+..-. | -
T Consensus 120 YdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cp------------W---G 184 (283)
T KOG3101|consen 120 YDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCP------------W---G 184 (283)
T ss_pred HHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCc------------c---h
Confidence 22224444555542 223479999999999999999999999999888888765532111 0 0
Q ss_pred HHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCCh----HHHHHHHhhc--CC
Q psy4974 237 RSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVST----QQVQSLLNQL--KF 310 (345)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~----~~~~~~~~~~--~~ 310 (345)
...+...++.+ ...+..++...+..........+|+=.|+.|.+.+. +...+..+.. ..
T Consensus 185 qKAf~gYLG~~---------------ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~ 249 (283)
T KOG3101|consen 185 QKAFTGYLGDN---------------KAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAP 249 (283)
T ss_pred HHHhhcccCCC---------------hHHHhhcchHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhcccccc
Confidence 11111111111 112222222233444455566789999999987662 2222222211 12
Q ss_pred cEEEEeCCCCCcc
Q psy4974 311 CQYYQFSSGGHSC 323 (345)
Q Consensus 311 ~~~~~~~~~gH~~ 323 (345)
+.+...+|-.|..
T Consensus 250 v~~r~~~gyDHSY 262 (283)
T KOG3101|consen 250 VVFRLQEGYDHSY 262 (283)
T ss_pred EEEEeecCCCcce
Confidence 4556667778864
No 159
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.33 E-value=1.9e-06 Score=76.89 Aligned_cols=103 Identities=19% Similarity=0.090 Sum_probs=79.7
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeE---EEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFT---SIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~---vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
-+++++||++++ ...|..+...+...|+. ++.+++++ - .. ... ....-++....+.+
T Consensus 60 ~pivlVhG~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------------~-~~--~~~---~~~~~~ql~~~V~~ 119 (336)
T COG1075 60 EPIVLVHGLGGG-YGNFLPLDYRLAILGWLTNGVYAFELSG-------------G-DG--TYS---LAVRGEQLFAYVDE 119 (336)
T ss_pred ceEEEEccCcCC-cchhhhhhhhhcchHHHhcccccccccc-------------c-CC--Ccc---ccccHHHHHHHHHH
Confidence 489999999777 48898888888888887 89999887 3 11 111 11134455666667
Q ss_pred HHHHhCCccEEEEEeChhHHHHHHHHHhCC--cccceeeEeccCCCCC
Q psy4974 171 LLKLLGVCKVSLFGWCDGGHLSFVFSMKYP--HMVHKLVIWGTKSFLT 216 (345)
Q Consensus 171 ~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~~ 216 (345)
.+...+.+++.|+||||||.+...++...+ .+|+.++.++++-...
T Consensus 120 ~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 120 VLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred HHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCCc
Confidence 777778889999999999999999999887 7899999999876543
No 160
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.32 E-value=1.5e-05 Score=70.69 Aligned_cols=119 Identities=15% Similarity=0.132 Sum_probs=75.8
Q ss_pred cCceEEEEEcC-----CCCceEEEEcCcCCCc---hhhH---HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCC
Q psy4974 80 KGCDIRFIKYG-----SGAQVLFFTYGVLGEI---RNSF---KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQS 148 (345)
Q Consensus 80 ~g~~l~~~~~g-----~~~p~vv~lHG~~~~~---~~~~---~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s 148 (345)
+...++....+ +.+|+||++||+|-.- .... ..+...|. . ..++++|+.- .. |
T Consensus 104 d~~s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~-~SILvLDYsL-------------t~-~ 167 (374)
T PF10340_consen 104 DSQSYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-E-VSILVLDYSL-------------TS-S 167 (374)
T ss_pred ccceEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-C-CeEEEEeccc-------------cc-c
Confidence 34445555532 2358999999987541 1111 22334444 3 6999999865 21 0
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCC-----cccceeeEeccCCCCC
Q psy4974 149 LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP-----HMVHKLVIWGTKSFLT 216 (345)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~ 216 (345)
......| + ..+.+.++....+++..|.+.|+|+|-|.||.+++.+.+... ...+++|+++|.....
T Consensus 168 ~~~~~~y-P-tQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 168 DEHGHKY-P-TQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred ccCCCcC-c-hHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 1112222 2 245666777777787778889999999999999988775421 2368999999977654
No 161
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.29 E-value=5.4e-05 Score=62.08 Aligned_cols=182 Identities=13% Similarity=0.178 Sum_probs=98.6
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEE-EEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTS-IFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~v-i~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
+..|||+.||+.+. ..+..+. +. .++.| +++|+|. . +.+ . +
T Consensus 11 ~~LilfF~GWg~d~-~~f~hL~--~~-~~~D~l~~yDYr~-------------l-----------~~d-~-----~---- 52 (213)
T PF04301_consen 11 KELILFFAGWGMDP-SPFSHLI--LP-ENYDVLICYDYRD-------------L-----------DFD-F-----D---- 52 (213)
T ss_pred CeEEEEEecCCCCh-HHhhhcc--CC-CCccEEEEecCcc-------------c-----------ccc-c-----c----
Confidence 45899999999884 6665542 22 23554 5678776 2 110 0 0
Q ss_pred HHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch----hHHHHHHhHhccCCChhhHHHHHHHcccC
Q psy4974 172 LKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID----NVRVFEGMRRLSNWSPMARSEVLKAYDND 247 (345)
Q Consensus 172 l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
+ -+.+.+.|||+|||-++|..+....| ++..|.+++...+... .+..+... +..+.+..+..+.+.+...
T Consensus 53 ~--~~y~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~Pid~~~GIpp~iF~~T--l~~l~ee~~~kF~rrmcg~ 126 (213)
T PF04301_consen 53 L--SGYREIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTPYPIDDEYGIPPAIFAGT--LENLSEENLQKFNRRMCGD 126 (213)
T ss_pred c--ccCceEEEEEEeHHHHHHHHHhccCC--cceeEEEECCCCCcCCCCCCCHHHHHHH--HHhCCHHHHHHHHHHhcCC
Confidence 1 13579999999999999988766543 6667777765543221 12222221 1223333333343333222
Q ss_pred Cchh-------hh-hHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCC
Q psy4974 248 VNYI-------TG-IFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSG 319 (345)
Q Consensus 248 ~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~ 319 (345)
.... .. ..+....++...+....... ....-.=...+.|++|.++|++..+..-+.. +.+..++ +
T Consensus 127 ~~~~~~f~~~~~r~~~~elk~EL~~l~~~~~~~~----~~~~~~wd~aiIg~~D~IFpp~nQ~~~W~~~--~~~~~~~-~ 199 (213)
T PF04301_consen 127 KELLEKFQSFPPRRSFEELKEELAALYEFIKKNP----PADLFHWDKAIIGKKDRIFPPENQKRAWQGR--CTIVEID-A 199 (213)
T ss_pred chhhHHhhcCCcCCCHHHHHHHHHHHHHHHhccC----CCCCccccEEEEcCCCEEeCHHHHHHHHhCc--CcEEEec-C
Confidence 1000 11 12333344444433221110 0000012358899999999998887777643 4566675 8
Q ss_pred CCcccc
Q psy4974 320 GHSCHI 325 (345)
Q Consensus 320 gH~~~~ 325 (345)
+|+++.
T Consensus 200 ~Hy~F~ 205 (213)
T PF04301_consen 200 PHYPFF 205 (213)
T ss_pred CCcCch
Confidence 999864
No 162
>KOG1551|consensus
Probab=98.29 E-value=2.5e-05 Score=64.68 Aligned_cols=227 Identities=13% Similarity=0.119 Sum_probs=119.3
Q ss_pred ceEEEEcCcCCCchhhHH-HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH-----
Q psy4974 94 QVLFFTYGVLGEIRNSFK-KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI----- 167 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~-~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~----- 167 (345)
+..+++-|-+++. ..=+ -+...+.++|...+.++-|- ||+..++..-. ..-+.+.|
T Consensus 114 ~KOG~~a~tgdh~-y~rr~~L~~p~~k~~i~tmvle~pf-------------Ygqr~p~~q~~----~~Le~vtDlf~mG 175 (371)
T KOG1551|consen 114 DLCLSWALTGDHV-YTRRLVLSKPINKREIATMVLEKPF-------------YGQRVPEEQII----HMLEYVTDLFKMG 175 (371)
T ss_pred CeeEEEeecCCce-eEeeeeecCchhhhcchheeeeccc-------------ccccCCHHHHH----HHHHHHHHHHHhh
Confidence 4666666666553 2212 23345556678888999999 88875443110 11111111
Q ss_pred ---HHHHH------HHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHH----HHHHhHhccCCCh
Q psy4974 168 ---AYELL------KLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVR----VFEGMRRLSNWSP 234 (345)
Q Consensus 168 ---~~~~l------~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~----~~~~~~~~~~~~~ 234 (345)
|.+.. ...|..+..++|-||||.+|......++..|.-+=++++.......... ....+.....-
T Consensus 176 ~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~~~-- 253 (371)
T KOG1551|consen 176 RATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATEGLLLQDTSKMKRFNQT-- 253 (371)
T ss_pred HHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhhhhhhhhhHHHHhhccC--
Confidence 11211 2235669999999999999999998776656655555543221111100 01111111100
Q ss_pred hhHHHHHHHcccCCchhhhh---HHHHHHHHHHHHHhhCchhhhccCCCCCC-----CEEEEEeCCCCCCChHHHHHHHh
Q psy4974 235 MARSEVLKAYDNDVNYITGI---FNQYVDMVNLIFKSYGRNVYQELLPYVDV-----PVLVFHSADDVMVSTQQVQSLLN 306 (345)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-----Pvl~i~G~~D~~v~~~~~~~~~~ 306 (345)
.......+...... +.... .+.-.++...+++..-.. ...+....+ -+.++.+++|..+|......+.+
T Consensus 254 t~~~~~~~r~p~Q~-~~~~~~~~srn~~~E~~~~Mr~vmd~--~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~ 330 (371)
T KOG1551|consen 254 TNKSGYTSRNPAQS-YHLLSKEQSRNSRKESLIFMRGVMDE--CTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQE 330 (371)
T ss_pred cchhhhhhhCchhh-HHHHHHHhhhcchHHHHHHHHHHHHh--hchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHH
Confidence 00000000000000 00000 000001111111111000 011222222 26788899999999988899999
Q ss_pred hcCCcEEEEeCCCCCcc-cccChHHHHHHHHHHHHhhcc
Q psy4974 307 QLKFCQYYQFSSGGHSC-HIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 307 ~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~~k 344 (345)
..|++++..++ +||.. .+-+-+.+.++|.+-|++.+|
T Consensus 331 ~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~k 368 (371)
T KOG1551|consen 331 IWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLDK 368 (371)
T ss_pred hCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhhhh
Confidence 99999999998 89974 446678999999999987654
No 163
>PLN02606 palmitoyl-protein thioesterase
Probab=98.26 E-value=1.9e-05 Score=67.73 Aligned_cols=97 Identities=15% Similarity=0.096 Sum_probs=62.1
Q ss_pred ceEEEEcCcCC--CchhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 94 QVLFFTYGVLG--EIRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 94 p~vv~lHG~~~--~~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
.|||++||+++ +. ..+..+.+.+.+. |..+..+. .| -+.. .. -+..+.+.++.+.+
T Consensus 27 ~PvViwHGlgD~~~~-~~~~~~~~~i~~~~~~pg~~v~-ig-------------~~~~----~s--~~~~~~~Qv~~vce 85 (306)
T PLN02606 27 VPFVLFHGFGGECSN-GKVSNLTQFLINHSGYPGTCVE-IG-------------NGVQ----DS--LFMPLRQQASIACE 85 (306)
T ss_pred CCEEEECCCCcccCC-chHHHHHHHHHhCCCCCeEEEE-EC-------------CCcc----cc--cccCHHHHHHHHHH
Confidence 48999999994 43 5666676666422 55444444 34 2211 11 11234444444443
Q ss_pred HHHH---hCCccEEEEEeChhHHHHHHHHHhCCc--ccceeeEeccC
Q psy4974 171 LLKL---LGVCKVSLFGWCDGGHLSFVFSMKYPH--MVHKLVIWGTK 212 (345)
Q Consensus 171 ~l~~---~~~~~i~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 212 (345)
-+.. +. +-++++|+|.||.++-.++.+.|+ .|+.+|.++++
T Consensus 86 ~l~~~~~L~-~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 86 KIKQMKELS-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred HHhcchhhc-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 3333 22 369999999999999999999876 59999999874
No 164
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.24 E-value=3.5e-06 Score=70.41 Aligned_cols=85 Identities=16% Similarity=0.165 Sum_probs=48.5
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCC--CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHH----HH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPK--LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDV----DI 167 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~--G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~----~~ 167 (345)
-.|||+||+.|+. ..|..+...+... .+.-..+...+ +... ... +.+.++..+ +.
T Consensus 5 hLvV~vHGL~G~~-~d~~~~~~~l~~~~~~~~~~~i~~~~-------------~~~n--~~~---T~~gI~~~g~rL~~e 65 (217)
T PF05057_consen 5 HLVVFVHGLWGNP-ADMRYLKNHLEKIPEDLPNARIVVLG-------------YSNN--EFK---TFDGIDVCGERLAEE 65 (217)
T ss_pred EEEEEeCCCCCCH-HHHHHHHHHHHHhhhhcchhhhhhhc-------------cccc--ccc---cchhhHHHHHHHHHH
Confidence 4899999999995 8888777666551 12211222222 1111 011 222344444 44
Q ss_pred HHHHHHHhCC--ccEEEEEeChhHHHHHHHHH
Q psy4974 168 AYELLKLLGV--CKVSLFGWCDGGHLSFVFSM 197 (345)
Q Consensus 168 ~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~ 197 (345)
+.+.++.... .++.+|||||||.++-.+..
T Consensus 66 I~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 66 ILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHhccccccccccceEEEecccHHHHHHHHH
Confidence 4444444343 38999999999999876554
No 165
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.17 E-value=0.0001 Score=68.58 Aligned_cols=125 Identities=16% Similarity=0.031 Sum_probs=82.6
Q ss_pred eeEEE-cCceEEEEEcCC---CC-ceEEEEcCcCCCch--hhH--HHHHH---hhCCCCeEEEEeCCCCchhhhccCCcc
Q psy4974 75 GFFSI-KGCDIRFIKYGS---GA-QVLFFTYGVLGEIR--NSF--KKQLT---AFDPKLFTSIFWDPPGNVVLYLLGKTC 142 (345)
Q Consensus 75 ~~~~~-~g~~l~~~~~g~---~~-p~vv~lHG~~~~~~--~~~--~~~~~---~L~~~G~~vi~~D~~G~~~~~~~g~~~ 142 (345)
..+.. ||++|+...+-+ ++ |+++..+-++-... ..+ ....+ .++.+||.|+..|.||
T Consensus 22 v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG----------- 90 (563)
T COG2936 22 VMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRG----------- 90 (563)
T ss_pred eeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccc-----------
Confidence 33444 999998666532 33 77777772221110 011 11233 6888999999999999
Q ss_pred CCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 143 SGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 143 ~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.|.|+..-..+ ... -.++..|+++++.+... .+|..+|.|++|...+.+|+..|.-+++++.+.+...
T Consensus 91 --~~~SeG~~~~~-~~~-E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 91 --RGGSEGVFDPE-SSR-EAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred --cccCCccccee-ccc-cccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 99997655443 111 12234455566555433 4899999999999999999998888899888877554
No 166
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.15 E-value=3.3e-05 Score=67.54 Aligned_cols=66 Identities=17% Similarity=0.204 Sum_probs=52.3
Q ss_pred CCCCC-CCEEEEEeCCCCCCChHHHHHHHhhcCC--cEEEEeCCCCCcccccChH---HHHHHHHHHHHhhc
Q psy4974 278 LPYVD-VPVLVFHSADDVMVSTQQVQSLLNQLKF--CQYYQFSSGGHSCHIKHGQ---VFNEISRNFILEEN 343 (345)
Q Consensus 278 l~~i~-~Pvl~i~G~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~---~~~~~i~~fl~~~~ 343 (345)
+..+. +|+|+++|.+|.++|...+..+...... .+...+++++|........ +..+.+.+|+.+..
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 33444 7999999999999999999888887755 5777888999988764433 67888999988754
No 167
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.02 E-value=4.6e-05 Score=66.35 Aligned_cols=107 Identities=14% Similarity=0.159 Sum_probs=64.7
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCC--eEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKL--FTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G--~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
++..+||+||++-+-...-...++-....| ...+.+-+|. -|.- -.-.| +-++...-..++.
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS-------------~g~l--~~Yn~-DreS~~~Sr~aLe 178 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPS-------------RGSL--LGYNY-DRESTNYSRPALE 178 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCC-------------CCee--eeccc-chhhhhhhHHHHH
Confidence 445899999997762233333443333333 6678888888 3321 11111 2223333344444
Q ss_pred HHHHHh----CCccEEEEEeChhHHHHHHHHHhC--------CcccceeeEeccCCC
Q psy4974 170 ELLKLL----GVCKVSLFGWCDGGHLSFVFSMKY--------PHMVHKLVIWGTKSF 214 (345)
Q Consensus 170 ~~l~~~----~~~~i~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~~ 214 (345)
.+++.+ ..++|+|++||||.++++....+. +.+++.+|+-+|-..
T Consensus 179 ~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 179 RLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred HHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 444443 466899999999999999877652 346788888877554
No 168
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.02 E-value=0.00045 Score=59.49 Aligned_cols=98 Identities=12% Similarity=0.087 Sum_probs=61.8
Q ss_pred ceEEEEcCcCCCch-hhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIR-NSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 94 p~vv~lHG~~~~~~-~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
.|+|+.||+|++.. .....+.+.+.+. |..+.++.. | .+ ....| +..+.+.++.+.+-
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g---------------~~--~~~s~--~~~~~~Qve~vce~ 85 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-G---------------NG--VGDSW--LMPLTQQAEIACEK 85 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-C---------------CC--ccccc--eeCHHHHHHHHHHH
Confidence 48999999998731 2334444444332 566666653 3 22 11222 22344444444443
Q ss_pred HHH---hCCccEEEEEeChhHHHHHHHHHhCCc--ccceeeEeccC
Q psy4974 172 LKL---LGVCKVSLFGWCDGGHLSFVFSMKYPH--MVHKLVIWGTK 212 (345)
Q Consensus 172 l~~---~~~~~i~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 212 (345)
+.. +. +-++++|+|.||.++-.++.+.|+ .|+.+|.++++
T Consensus 86 l~~~~~l~-~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 86 VKQMKELS-QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred Hhhchhhh-CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 333 22 369999999999999999999876 59999999874
No 169
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.00 E-value=3e-05 Score=56.47 Aligned_cols=60 Identities=13% Similarity=0.298 Sum_probs=54.5
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 282 DVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 282 ~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
..|+|++.++.|+++|.+.++.+++.+++++++.+++.||........-+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 589999999999999999999999999999999999999998865557778899999974
No 170
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.95 E-value=0.00027 Score=63.08 Aligned_cols=157 Identities=13% Similarity=0.111 Sum_probs=97.8
Q ss_pred HHHHHHHh---CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhcc-CCChhhHHHHHHH
Q psy4974 168 AYELLKLL---GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS-NWSPMARSEVLKA 243 (345)
Q Consensus 168 ~~~~l~~~---~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 243 (345)
+.+++++. .++++++.|.|==|..++..|+ ...||++++-+.-... ..........+... .|...+......-
T Consensus 159 vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~L--N~~~~l~h~y~~yG~~ws~a~~dY~~~g 235 (367)
T PF10142_consen 159 VQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVL--NMKANLEHQYRSYGGNWSFAFQDYYNEG 235 (367)
T ss_pred HHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccC--CcHHHHHHHHHHhCCCCccchhhhhHhC
Confidence 33455544 5779999999999999999988 4467888875543222 11112222233333 3333322222211
Q ss_pred cccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC-cEEEEeCCCCCc
Q psy4974 244 YDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF-CQYYQFSSGGHS 322 (345)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~-~~~~~~~~~gH~ 322 (345)
+... + ....+..+....+...+. .++.+|-++|.|..|++..+.....+...+|+ ..+..+|+++|.
T Consensus 236 i~~~------l---~tp~f~~L~~ivDP~~Y~---~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~ 303 (367)
T PF10142_consen 236 ITQQ------L---DTPEFDKLMQIVDPYSYR---DRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHS 303 (367)
T ss_pred chhh------c---CCHHHHHHHHhcCHHHHH---HhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcc
Confidence 1111 0 011222233333333333 44588999999999999999999999999985 567788999998
Q ss_pred ccccChHHHHHHHHHHHHhh
Q psy4974 323 CHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 323 ~~~~~~~~~~~~i~~fl~~~ 342 (345)
... ..+.+.+..|+...
T Consensus 304 ~~~---~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 304 LIG---SDVVQSLRAFYNRI 320 (367)
T ss_pred cch---HHHHHHHHHHHHHH
Confidence 875 67777888888653
No 171
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.95 E-value=0.012 Score=54.33 Aligned_cols=60 Identities=15% Similarity=0.257 Sum_probs=47.9
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHhhcC------------------------C-cEEEEeCCCCCcccccChHHHHHHHH
Q psy4974 282 DVPVLVFHSADDVMVSTQQVQSLLNQLK------------------------F-CQYYQFSSGGHSCHIKHGQVFNEISR 336 (345)
Q Consensus 282 ~~Pvl~i~G~~D~~v~~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~~~~~~~~~~~i~ 336 (345)
..+||+..|+.|.+|+.-..+.+.+.+. + .+++.+.+|||... .+|++..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 4799999999999999877777655431 1 35667788999996 68999999999
Q ss_pred HHHHhh
Q psy4974 337 NFILEE 342 (345)
Q Consensus 337 ~fl~~~ 342 (345)
.|+...
T Consensus 426 ~Fi~~~ 431 (433)
T PLN03016 426 RWISGQ 431 (433)
T ss_pred HHHcCC
Confidence 999653
No 172
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.91 E-value=2e-05 Score=67.56 Aligned_cols=52 Identities=8% Similarity=0.125 Sum_probs=40.8
Q ss_pred HHHHHHHHHHH-hCCc--cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 164 DVDIAYELLKL-LGVC--KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 164 ~~~~~~~~l~~-~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
..+++..+++. +... +..|+|+||||..|+.++.++|+.+.++++++|....
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 34566655554 3322 3799999999999999999999999999999987553
No 173
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.88 E-value=7.5e-05 Score=70.74 Aligned_cols=110 Identities=11% Similarity=0.109 Sum_probs=64.7
Q ss_pred CCceEEEEcCcCCC--chhhHHHHHHhhCC-C-CeEEEEeCCC-CchhhhccCCccCCCCCCCC--CCCCCCCccchHHH
Q psy4974 92 GAQVLFFTYGVLGE--IRNSFKKQLTAFDP-K-LFTSIFWDPP-GNVVLYLLGKTCSGYGQSLP--KGRSFVPFQYIEED 164 (345)
Q Consensus 92 ~~p~vv~lHG~~~~--~~~~~~~~~~~L~~-~-G~~vi~~D~~-G~~~~~~~g~~~~~~G~s~~--~~~~~~~~~~~~~~ 164 (345)
..|+||+|||++-. +...+ ....|.. . |+.|+.+++| | ..| +..+.. ....+ .+.+....
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg-----~~g-----~~~~~~~~~~~n~-g~~D~~~a 160 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLG-----VLG-----FLSTGDIELPGNY-GLKDQRLA 160 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEeccccc-----ccc-----cccCCCCCCCcch-hHHHHHHH
Confidence 34899999997532 01221 1122322 2 4999999999 4 001 222211 11222 22233334
Q ss_pred HHHHHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCC
Q psy4974 165 VDIAYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSF 214 (345)
Q Consensus 165 ~~~~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 214 (345)
.+++.+.+..++. ++|.|+|+|.||..+..++... +..++++|+.++...
T Consensus 161 l~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 161 LKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 4555555666654 4899999999999988877652 346888888887544
No 174
>PLN02209 serine carboxypeptidase
Probab=97.85 E-value=0.0081 Score=55.55 Aligned_cols=59 Identities=17% Similarity=0.278 Sum_probs=47.6
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHhhc------------------------CC-cEEEEeCCCCCcccccChHHHHHHHH
Q psy4974 282 DVPVLVFHSADDVMVSTQQVQSLLNQL------------------------KF-CQYYQFSSGGHSCHIKHGQVFNEISR 336 (345)
Q Consensus 282 ~~Pvl~i~G~~D~~v~~~~~~~~~~~~------------------------~~-~~~~~~~~~gH~~~~~~~~~~~~~i~ 336 (345)
.++||+..|+.|.+|+....+.+.+.+ .+ .+++.+.+|||... .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 479999999999999987777765544 12 45667788999995 69999999999
Q ss_pred HHHHh
Q psy4974 337 NFILE 341 (345)
Q Consensus 337 ~fl~~ 341 (345)
.|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
No 175
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.80 E-value=0.0002 Score=65.35 Aligned_cols=113 Identities=18% Similarity=0.147 Sum_probs=67.1
Q ss_pred EcCceEEEEEcCCCCceEEEEc-CcCCCchhhHHHHHHhhCCCCeE------EEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 79 IKGCDIRFIKYGSGAQVLFFTY-GVLGEIRNSFKKQLTAFDPKLFT------SIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 79 ~~g~~l~~~~~g~~~p~vv~lH-G~~~~~~~~~~~~~~~L~~~G~~------vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
..|+.+.....|... .|-.+- ..... ...|..+++.|.+.||. ..-+|+|- +..
T Consensus 37 ~~gv~i~~~~~g~~~-~i~~ld~~~~~~-~~~~~~li~~L~~~GY~~~~~l~~~pYDWR~----------------~~~- 97 (389)
T PF02450_consen 37 DPGVEIRVPGFGGTS-GIEYLDPSFITG-YWYFAKLIENLEKLGYDRGKDLFAAPYDWRL----------------SPA- 97 (389)
T ss_pred CCCceeecCCCCcee-eeeecccccccc-cchHHHHHHHHHhcCcccCCEEEEEeechhh----------------chh-
Confidence 356666655555211 233332 22222 24899999999887764 22268776 100
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCc------ccceeeEeccCCCC
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH------MVHKLVIWGTKSFL 215 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~------~v~~lvl~~~~~~~ 215 (345)
. ....+..+.+.+.+..+. ..++++|+||||||.++..+....+. .|+++|.++++...
T Consensus 98 ~----~~~~~~~lk~~ie~~~~~-~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 98 E----RDEYFTKLKQLIEEAYKK-NGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred h----HHHHHHHHHHHHHHHHHh-cCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 0 001222333333333332 35799999999999999998887643 49999999986553
No 176
>KOG3724|consensus
Probab=97.78 E-value=0.00039 Score=66.24 Aligned_cols=100 Identities=14% Similarity=0.131 Sum_probs=57.5
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhC----------------CCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCC
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFD----------------PKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVP 157 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~----------------~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~ 157 (345)
-||+||+|..|+ ...-+.++.... ...|+.+++|+-+ +- ..+ .
T Consensus 90 IPVLFIPGNAGS-yKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE---------------e~----tAm-~ 148 (973)
T KOG3724|consen 90 IPVLFIPGNAGS-YKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE---------------EF----TAM-H 148 (973)
T ss_pred ceEEEecCCCCc-hHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc---------------hh----hhh-c
Confidence 389999999999 366666553322 1126677777644 10 011 1
Q ss_pred ccchHHHHHHHHH----HHHHhCC---------ccEEEEEeChhHHHHHHHHHh---CCcccceeeEeccCCC
Q psy4974 158 FQYIEEDVDIAYE----LLKLLGV---------CKVSLFGWCDGGHLSFVFSMK---YPHMVHKLVIWGTKSF 214 (345)
Q Consensus 158 ~~~~~~~~~~~~~----~l~~~~~---------~~i~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~~ 214 (345)
...+.++++.+.+ +++.... ..++|+||||||.+|..++.. .++.|.-++..+++-.
T Consensus 149 G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 149 GHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred cHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 1233344333332 3332221 249999999999999887753 2345666666665443
No 177
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.69 E-value=0.00016 Score=65.75 Aligned_cols=119 Identities=10% Similarity=0.027 Sum_probs=70.1
Q ss_pred CCCceEEEEcCcCCCc--hhhHHHHHHhhCCCC-eEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 91 SGAQVLFFTYGVLGEI--RNSFKKQLTAFDPKL-FTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~--~~~~~~~~~~L~~~G-~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
++.|++|+|||++-.. ......-...|+++| +-|+++++|-.--=+|.... ++..+...... .+.+.....++
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~---~~~~~~~~~n~-Gl~DqilALkW 167 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSS---LDTEDAFASNL-GLLDQILALKW 167 (491)
T ss_pred CCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhh---ccccccccccc-cHHHHHHHHHH
Confidence 3458999999976321 122112235677887 99999998850000111111 22111111222 22233333566
Q ss_pred HHHHHHHhCCc--cEEEEEeChhHHHHHHHHHhCC---cccceeeEeccCCC
Q psy4974 168 AYELLKLLGVC--KVSLFGWCDGGHLSFVFSMKYP---HMVHKLVIWGTKSF 214 (345)
Q Consensus 168 ~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~ 214 (345)
+.+-++++|-+ .|.|+|+|.||+.++.+.+- | ..++++|+.++...
T Consensus 168 V~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 168 VRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 66777788755 79999999999988776653 4 35788888888765
No 178
>KOG2541|consensus
Probab=97.66 E-value=0.00035 Score=58.27 Aligned_cols=98 Identities=16% Similarity=0.173 Sum_probs=66.5
Q ss_pred ceEEEEcCcCCCchhh--HHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNS--FKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~--~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
.|+|++||.+++. .. ...+.+.+.+. |..|+++|. | -| . ... .+....+.++.+.+
T Consensus 24 ~P~ii~HGigd~c-~~~~~~~~~q~l~~~~g~~v~~lei-g-------------~g--~--~~s--~l~pl~~Qv~~~ce 82 (296)
T KOG2541|consen 24 VPVIVWHGIGDSC-SSLSMANLTQLLEELPGSPVYCLEI-G-------------DG--I--KDS--SLMPLWEQVDVACE 82 (296)
T ss_pred CCEEEEeccCccc-ccchHHHHHHHHHhCCCCeeEEEEe-c-------------CC--c--chh--hhccHHHHHHHHHH
Confidence 4899999999874 43 56666666555 789999996 4 33 0 111 22344555555555
Q ss_pred HHHHhC--CccEEEEEeChhHHHHHHHHHhCC-cccceeeEeccC
Q psy4974 171 LLKLLG--VCKVSLFGWCDGGHLSFVFSMKYP-HMVHKLVIWGTK 212 (345)
Q Consensus 171 ~l~~~~--~~~i~lvGhS~Gg~ia~~~a~~~p-~~v~~lvl~~~~ 212 (345)
.++... .+-++++|.|.||.++-.++...+ ..|+.+|.++++
T Consensus 83 ~v~~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 83 KVKQMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred HHhcchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 554332 246899999999999999998754 358899988864
No 179
>KOG1282|consensus
Probab=97.65 E-value=0.018 Score=53.08 Aligned_cols=60 Identities=15% Similarity=0.219 Sum_probs=48.1
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHhhc---------C----------------CcEEEEeCCCCCcccccChHHHHHHHHH
Q psy4974 283 VPVLVFHSADDVMVSTQQVQSLLNQL---------K----------------FCQYYQFSSGGHSCHIKHGQVFNEISRN 337 (345)
Q Consensus 283 ~Pvl~i~G~~D~~v~~~~~~~~~~~~---------~----------------~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 337 (345)
.++++..|+.|.++|.-..+.+.+.+ | +..+..+.|+||.+..++|+.....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 68999999999999987666654332 1 1234677899999999999999999999
Q ss_pred HHHhh
Q psy4974 338 FILEE 342 (345)
Q Consensus 338 fl~~~ 342 (345)
||...
T Consensus 444 fl~g~ 448 (454)
T KOG1282|consen 444 FLNGQ 448 (454)
T ss_pred HHcCC
Confidence 99764
No 180
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.61 E-value=0.00056 Score=63.41 Aligned_cols=224 Identities=16% Similarity=0.161 Sum_probs=121.0
Q ss_pred cCceEEEEEcCC-----CCceEEEEcCcCCCc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC---C
Q psy4974 80 KGCDIRFIKYGS-----GAQVLFFTYGVLGEI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL---P 150 (345)
Q Consensus 80 ~g~~l~~~~~g~-----~~p~vv~lHG~~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~---~ 150 (345)
||.+|.|...++ ..|++|+--|+..-+ ...|......+-++|...+..+.|| -+++|..= .
T Consensus 403 DGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRG----------GGEfGp~WH~Aa 472 (648)
T COG1505 403 DGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRG----------GGEFGPEWHQAG 472 (648)
T ss_pred CCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEeccc----------CCccCHHHHHHH
Confidence 999999987642 246777766655432 1345555566667888888899999 11122110 0
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCC---ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhH
Q psy4974 151 KGRSFVPFQYIEEDVDIAYELLKLLGV---CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMR 227 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 227 (345)
.... ....+++...-+..++++ ++ +++.+.|-|-||.+.-.+..++|+.+.++|+--|...+-.. ..+.
T Consensus 473 ~k~n--rq~vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRY-----h~l~ 544 (648)
T COG1505 473 MKEN--KQNVFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRY-----HLLT 544 (648)
T ss_pred hhhc--chhhhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhh-----cccc
Confidence 0000 111233334333333332 43 48899999999999988889999988888876664432110 0000
Q ss_pred hccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCC--CCCCEEEEEeCCCCCCChHHHHHHH
Q psy4974 228 RLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPY--VDVPVLVFHSADDVMVSTQQVQSLL 305 (345)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~Pvl~i~G~~D~~v~~~~~~~~~ 305 (345)
.-..| + .-|+.. -.+. ....+..+.. ...++. .=-|+|+-.+..|.-|.+.++++++
T Consensus 545 aG~sW-------~-~EYG~P--d~P~--------d~~~l~~YSP---y~nl~~g~kYP~~LITTs~~DDRVHPaHarKfa 603 (648)
T COG1505 545 AGSSW-------I-AEYGNP--DDPE--------DRAFLLAYSP---YHNLKPGQKYPPTLITTSLHDDRVHPAHARKFA 603 (648)
T ss_pred cchhh-------H-hhcCCC--CCHH--------HHHHHHhcCc---hhcCCccccCCCeEEEcccccccccchHHHHHH
Confidence 00000 0 111111 0000 1111111211 122221 1148999999999988888999988
Q ss_pred hhcCC--c--EEEEeCCCCCcccccChH--HHHHHHHHHHHhh
Q psy4974 306 NQLKF--C--QYYQFSSGGHSCHIKHGQ--VFNEISRNFILEE 342 (345)
Q Consensus 306 ~~~~~--~--~~~~~~~~gH~~~~~~~~--~~~~~i~~fl~~~ 342 (345)
..+.. . -+.+=.++||..--...+ .-...+..||.+.
T Consensus 604 a~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~ 646 (648)
T COG1505 604 AKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRT 646 (648)
T ss_pred HHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHh
Confidence 87742 2 233334689986544332 2334455666543
No 181
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.61 E-value=0.00041 Score=64.60 Aligned_cols=106 Identities=19% Similarity=0.249 Sum_probs=65.5
Q ss_pred eEEEEcCcCCCchhhH--HHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCC----CCCCCccchHHHHHH
Q psy4974 95 VLFFTYGVLGEIRNSF--KKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG----RSFVPFQYIEEDVDI 167 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~--~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~----~~~~~~~~~~~~~~~ 167 (345)
||++.-|+-+.....| ..+...|+++ |-.++++++|- +|.|.+.. ... ..-+.++..+|
T Consensus 30 pifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRy-------------YG~S~P~~~~s~~nL-~yLt~~QALaD 95 (434)
T PF05577_consen 30 PIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRY-------------YGKSQPFGDLSTENL-RYLTSEQALAD 95 (434)
T ss_dssp EEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TT-------------STTB-TTGGGGGSTT-TC-SHHHHHHH
T ss_pred CEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhh-------------hcCCCCccccchhhH-HhcCHHHHHHH
Confidence 4555556655531222 2244455554 78999999999 99996532 122 23356777788
Q ss_pred HHHHHHHhC-------CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 168 AYELLKLLG-------VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 168 ~~~~l~~~~-------~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
+..+++.+. ..|++++|-|.||.+|..+-.++|+.|.+.+.-+++..
T Consensus 96 ~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 96 LAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred HHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 887776653 13899999999999999999999999999998887654
No 182
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.58 E-value=0.016 Score=49.23 Aligned_cols=103 Identities=13% Similarity=0.166 Sum_probs=73.1
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
|.|+++-...|+-....+...+.|... ..|+.-|+-. --.-+...+.| +++++.+.+.+.+.
T Consensus 104 PkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~d-------------Ar~Vp~~~G~F----dldDYIdyvie~~~ 165 (415)
T COG4553 104 PKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVD-------------ARMVPLEAGHF----DLDDYIDYVIEMIN 165 (415)
T ss_pred CeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccc-------------cceeecccCCc----cHHHHHHHHHHHHH
Confidence 567777777666335667777888776 7888888766 33333345556 67778999999999
Q ss_pred HhCCccEEEEEeChhH-----HHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 174 LLGVCKVSLFGWCDGG-----HLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 174 ~~~~~~i~lvGhS~Gg-----~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
.+|.+ +++++-|.=+ .++++.+...|.....+++++++...
T Consensus 166 ~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 166 FLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred HhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 99965 7888888764 44555555567778899999887653
No 183
>KOG3967|consensus
Probab=97.54 E-value=0.00055 Score=55.04 Aligned_cols=110 Identities=10% Similarity=0.137 Sum_probs=66.7
Q ss_pred CceEEEEcCcCCCchhhHHH---------------HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCC
Q psy4974 93 AQVLFFTYGVLGEIRNSFKK---------------QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVP 157 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~---------------~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~ 157 (345)
+..+|+|||.|--....|.. .++.-.+.||.|+..+.-- +..+-.+...+..|
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~----------~~kfye~k~np~ky-- 168 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNR----------ERKFYEKKRNPQKY-- 168 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCch----------hhhhhhcccCcchh--
Confidence 34899999988653355632 2344446689999887531 11122221122222
Q ss_pred ccchHHHHHHHH-HHHHHhCCccEEEEEeChhHHHHHHHHHhCCc--ccceeeEeccCCC
Q psy4974 158 FQYIEEDVDIAY-ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH--MVHKLVIWGTKSF 214 (345)
Q Consensus 158 ~~~~~~~~~~~~-~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 214 (345)
..+-.+.+..+- .++.-...+.+.++.||.||...+.+..++|+ +|.++.+.+++..
T Consensus 169 irt~veh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~ 228 (297)
T KOG3967|consen 169 IRTPVEHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMG 228 (297)
T ss_pred ccchHHHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccccc
Confidence 112223333222 33444456789999999999999999999874 6778888777644
No 184
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.51 E-value=0.0016 Score=58.21 Aligned_cols=36 Identities=14% Similarity=0.210 Sum_probs=31.2
Q ss_pred cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 179 KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 179 ~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
|++++|+|.||++|...|.-.|..+++++=-++...
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999998888876665544
No 185
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=97.49 E-value=0.0016 Score=57.94 Aligned_cols=113 Identities=13% Similarity=0.152 Sum_probs=86.4
Q ss_pred eEEEEEcCCCCceEEEEcCcCCCchhhH-HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccch
Q psy4974 83 DIRFIKYGSGAQVLFFTYGVLGEIRNSF-KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYI 161 (345)
Q Consensus 83 ~l~~~~~g~~~p~vv~lHG~~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~ 161 (345)
++...+.+...|+|+..-|.+.+. ... ......|. -+-+.+++|- ++.|.+.+.++ ..-++
T Consensus 53 RvtLlHk~~drPtV~~T~GY~~~~-~p~r~Ept~Lld---~NQl~vEhRf-------------F~~SrP~p~DW-~~Lti 114 (448)
T PF05576_consen 53 RVTLLHKDFDRPTVLYTEGYNVST-SPRRSEPTQLLD---GNQLSVEHRF-------------FGPSRPEPADW-SYLTI 114 (448)
T ss_pred EEEEEEcCCCCCeEEEecCccccc-CccccchhHhhc---cceEEEEEee-------------ccCCCCCCCCc-ccccH
Confidence 455556666778999999987763 322 23333332 4678899999 99999888888 77788
Q ss_pred HHHHHHHHHHHHHhC---CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCC
Q psy4974 162 EEDVDIAYELLKLLG---VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKS 213 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~---~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 213 (345)
.+.+.|..++++++. ..+.+-.|-|=||+.++.+=.-+|+.|++.|.--.+.
T Consensus 115 ~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 115 WQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred hHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 888999888887764 3478889999999999998888999999988765543
No 186
>COG0627 Predicted esterase [General function prediction only]
Probab=97.48 E-value=0.00051 Score=60.32 Aligned_cols=38 Identities=13% Similarity=0.129 Sum_probs=34.3
Q ss_pred cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCC
Q psy4974 179 KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLT 216 (345)
Q Consensus 179 ~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 216 (345)
+..|+||||||.=|+.+|.++|++++.+..+++.....
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 68999999999999999999999999999988876644
No 187
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.44 E-value=0.026 Score=47.22 Aligned_cols=101 Identities=13% Similarity=0.057 Sum_probs=58.1
Q ss_pred eEEEEcCcC--CCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 95 VLFFTYGVL--GEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 95 ~vv~lHG~~--~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
+|=|+-|.. ..+.-.|+.+++.|+++||.|++.-+.- |.. .... ....+.+.-..+..+.
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~--------------tfD---H~~~-A~~~~~~f~~~~~~L~ 80 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV--------------TFD---HQAI-AREVWERFERCLRALQ 80 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC--------------CCc---HHHH-HHHHHHHHHHHHHHHH
Confidence 344444422 2356789999999999999999987643 100 0000 0001111111222222
Q ss_pred HHhCC----ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCC
Q psy4974 173 KLLGV----CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKS 213 (345)
Q Consensus 173 ~~~~~----~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 213 (345)
+..+. -+++-+|||+|+-+-+.+...++..-++.|+++-..
T Consensus 81 ~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN 125 (250)
T PF07082_consen 81 KRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNN 125 (250)
T ss_pred HhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEecCC
Confidence 22222 267889999999988888877765556777776543
No 188
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.34 E-value=0.00061 Score=60.21 Aligned_cols=85 Identities=21% Similarity=0.131 Sum_probs=59.2
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
...-||+.|=||- +..=+.+.+.|+++|+.|+.+|-.- |-.+.+ +-++.++|+..++
T Consensus 260 d~~av~~SGDGGW-r~lDk~v~~~l~~~gvpVvGvdsLR-------------YfW~~r---------tPe~~a~Dl~r~i 316 (456)
T COG3946 260 DTVAVFYSGDGGW-RDLDKEVAEALQKQGVPVVGVDSLR-------------YFWSER---------TPEQIAADLSRLI 316 (456)
T ss_pred ceEEEEEecCCch-hhhhHHHHHHHHHCCCceeeeehhh-------------hhhccC---------CHHHHHHHHHHHH
Confidence 3456777776665 3555668899999999999999655 444433 2344466666555
Q ss_pred HH----hCCccEEEEEeChhHHHHHHHHHhCC
Q psy4974 173 KL----LGVCKVSLFGWCDGGHLSFVFSMKYP 200 (345)
Q Consensus 173 ~~----~~~~~i~lvGhS~Gg~ia~~~a~~~p 200 (345)
+. .+..++.|+|+|+|+-+.-..-.+.|
T Consensus 317 ~~y~~~w~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 317 RFYARRWGAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred HHHHHhhCcceEEEEeecccchhhHHHHHhCC
Confidence 54 56679999999999988766555555
No 189
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.33 E-value=0.00044 Score=59.00 Aligned_cols=102 Identities=16% Similarity=0.119 Sum_probs=52.2
Q ss_pred ceEEEEcCcCCCch--hhHH---HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIR--NSFK---KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 94 p~vv~lHG~~~~~~--~~~~---~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
.|||+.||++++.. ..+. .+++.... |.-|.+++.-. +.++..... -+..+.+.++.+
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~P-G~yV~si~ig~--------------~~~~D~~~s--~f~~v~~Qv~~v 68 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQHP-GTYVHSIEIGN--------------DPSEDVENS--FFGNVNDQVEQV 68 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHST-T--EEE--SSS--------------SHHHHHHHH--HHSHHHHHHHHH
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhCC-CceEEEEEECC--------------Ccchhhhhh--HHHHHHHHHHHH
Confidence 48999999997521 2333 34444433 67888888622 211000000 112344555555
Q ss_pred HHHHHHhC--CccEEEEEeChhHHHHHHHHHhCCc-ccceeeEeccC
Q psy4974 169 YELLKLLG--VCKVSLFGWCDGGHLSFVFSMKYPH-MVHKLVIWGTK 212 (345)
Q Consensus 169 ~~~l~~~~--~~~i~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~ 212 (345)
.+.+.... .+-++++|+|.||.++-.++.+.|+ .|+.+|.++++
T Consensus 69 c~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 69 CEQLANDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp HHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred HHHHhhChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 55555422 1469999999999999999999864 69999999874
No 190
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.24 E-value=0.11 Score=46.27 Aligned_cols=59 Identities=15% Similarity=0.252 Sum_probs=47.0
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHhhcC------------------------C-cEEEEeCCCCCcccccChHHHHHHHH
Q psy4974 282 DVPVLVFHSADDVMVSTQQVQSLLNQLK------------------------F-CQYYQFSSGGHSCHIKHGQVFNEISR 336 (345)
Q Consensus 282 ~~Pvl~i~G~~D~~v~~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~~~~~~~~~~~i~ 336 (345)
.++||+..|+.|.+|+.-..+.+.+.+. + .+++.+.+|||+.. .+|++..+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4799999999999999776666655441 1 45566778999996 58999999999
Q ss_pred HHHHh
Q psy4974 337 NFILE 341 (345)
Q Consensus 337 ~fl~~ 341 (345)
.|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99965
No 191
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.19 E-value=0.017 Score=44.50 Aligned_cols=179 Identities=12% Similarity=0.178 Sum_probs=92.6
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCCeE-EEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKLFT-SIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G~~-vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
.||++-||+..+ ..+..++ +.++ +. ++++|+.. . .-++ ++.
T Consensus 13 LIvyFaGwgtpp-s~v~HLi--lpeN-~dl~lcYDY~d-------------l------~ldf-Dfs-------------- 54 (214)
T COG2830 13 LIVYFAGWGTPP-SAVNHLI--LPEN-HDLLLCYDYQD-------------L------NLDF-DFS-------------- 54 (214)
T ss_pred EEEEEecCCCCH-HHHhhcc--CCCC-CcEEEEeehhh-------------c------Cccc-chh--------------
Confidence 788888887775 6666553 4444 54 56888877 3 2222 111
Q ss_pred HhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh----HHHHHHhHhccCCChhhHHHHHHHcccCC-
Q psy4974 174 LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN----VRVFEGMRRLSNWSPMARSEVLKAYDNDV- 248 (345)
Q Consensus 174 ~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (345)
..+.+.++++|||-.+|-++....+ ++..+.+++........ ...+... +.......+-.+.+.+..+.
T Consensus 55 --Ay~hirlvAwSMGVwvAeR~lqg~~--lksatAiNGTgLpcDds~GIp~AIF~gT--L~nl~e~nr~kFerricg~k~ 128 (214)
T COG2830 55 --AYRHIRLVAWSMGVWVAERVLQGIR--LKSATAINGTGLPCDDSFGIPPAIFKGT--LENLTENNRLKFERRICGDKA 128 (214)
T ss_pred --hhhhhhhhhhhHHHHHHHHHHhhcc--ccceeeecCCCCCccccCCCCHHHHHHH--HhccchhhHHHHHHHHhcccc
Confidence 1246789999999999999887764 67777777644322211 1222211 11222222222222222211
Q ss_pred ------chhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCc
Q psy4974 249 ------NYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHS 322 (345)
Q Consensus 249 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~ 322 (345)
.+...-....-..+...+.......-.+.+. =.-.+.|++|.+.|+.....+.+. .+.+..+. ++|+
T Consensus 129 ~l~~yq~f~~rp~~eIh~El~alfa~i~Qdrr~dli~----W~ka~v~skDkIFpp~nq~ayw~~--rc~v~ei~-g~H~ 201 (214)
T COG2830 129 SLEDYQIFPARPFLEIHQELTALFAMIQQDRRTDLIL----WDKAYVGSKDKIFPPANQHAYWNA--RCAVIEIN-GEHY 201 (214)
T ss_pred cchhhhccCcChHHHHHHHHHHHHHHHhhhhhhhhhh----hhhhhccCCCcccCCcchhhhhcc--ceeEEEec-Ccce
Confidence 0111112222223333332222111011111 112567899999998877666553 46777785 7887
Q ss_pred cc
Q psy4974 323 CH 324 (345)
Q Consensus 323 ~~ 324 (345)
.+
T Consensus 202 ~F 203 (214)
T COG2830 202 LF 203 (214)
T ss_pred EE
Confidence 54
No 192
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.13 E-value=0.0014 Score=51.50 Aligned_cols=39 Identities=15% Similarity=0.227 Sum_probs=31.1
Q ss_pred CCccEEEEEeChhHHHHHHHHHhCCc----ccceeeEeccCCC
Q psy4974 176 GVCKVSLFGWCDGGHLSFVFSMKYPH----MVHKLVIWGTKSF 214 (345)
Q Consensus 176 ~~~~i~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~ 214 (345)
...+++++|||+||.+|..++..... .+..++.++++..
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 55799999999999999998887644 4667777777654
No 193
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.12 E-value=0.028 Score=53.20 Aligned_cols=109 Identities=17% Similarity=0.138 Sum_probs=70.4
Q ss_pred CceEEEEcCcCCCc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCC----CCCCCCCCCccchHHHHHH
Q psy4974 93 AQVLFFTYGVLGEI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQS----LPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 93 ~p~vv~lHG~~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s----~~~~~~~~~~~~~~~~~~~ 167 (345)
.|.++.--|.-|.+ ...|....-.|.++||--...-.|| |.- .|.. .+... -..++.+..+.
T Consensus 448 ~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRG-------Gge---lG~~WYe~GK~l~---K~NTf~DFIa~ 514 (682)
T COG1770 448 APLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRG-------GGE---LGRAWYEDGKLLN---KKNTFTDFIAA 514 (682)
T ss_pred CcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeec-------ccc---cChHHHHhhhhhh---ccccHHHHHHH
Confidence 36777777765552 2344444445677887766667777 111 1211 01111 12256666666
Q ss_pred HHHHHHHh--CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 168 AYELLKLL--GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 168 ~~~~l~~~--~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
...+++.- ..+.++++|-|.||+++-..+...|+.++++|+--|...
T Consensus 515 a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 515 ARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred HHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 66665542 234799999999999999999999999999998888655
No 194
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.09 E-value=0.00062 Score=65.15 Aligned_cols=115 Identities=10% Similarity=0.044 Sum_probs=59.3
Q ss_pred CceEEEEcCcCCCch-h--hHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIR-N--SFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~-~--~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
.|++|+|||++-... . ....-...++.++.-||.+++|= -.-|+.+ .+....+...+ .+.+.....+++.
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRl----g~~Gfl~--~~~~~~~~gN~-Gl~Dq~~AL~WV~ 197 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRL----GAFGFLS--LGDLDAPSGNY-GLLDQRLALKWVQ 197 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE--------HHHHH-B--SSSTTSHBSTH-HHHHHHHHHHHHH
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEecccc----ccccccc--ccccccCchhh-hhhhhHHHHHHHH
Confidence 389999999764310 1 12222233445679999999985 1111110 01111111333 2222333344555
Q ss_pred HHHHHhCCc--cEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCC
Q psy4974 170 ELLKLLGVC--KVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSF 214 (345)
Q Consensus 170 ~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 214 (345)
+-+..+|-+ +|.|+|||.||..+....... ...++++|+.++...
T Consensus 198 ~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 198 DNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 556666644 899999999998877766542 246999999998543
No 195
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.99 E-value=0.0024 Score=49.20 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhC
Q psy4974 163 EDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 163 ~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
...+.+.++++..+..++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 3455566666666656899999999999999888763
No 196
>KOG2183|consensus
Probab=96.91 E-value=0.0045 Score=55.02 Aligned_cols=106 Identities=30% Similarity=0.443 Sum_probs=70.7
Q ss_pred CCCceEEEEcCcCCCchhhHHH---HHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCC-------CCCcc
Q psy4974 91 SGAQVLFFTYGVLGEIRNSFKK---QLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRS-------FVPFQ 159 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~~~~~~---~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~-------~~~~~ 159 (345)
.+.-||+|.-|.-|+. +.|.. ++-.++++ +--++..+.|- +|+|-+-... . ..-
T Consensus 78 ~g~gPIffYtGNEGdi-e~Fa~ntGFm~D~Ap~~~AllVFaEHRy-------------YGeS~PFG~~s~k~~~hl-gyL 142 (492)
T KOG2183|consen 78 KGEGPIFFYTGNEGDI-EWFANNTGFMWDLAPELKALLVFAEHRY-------------YGESLPFGSQSYKDARHL-GYL 142 (492)
T ss_pred CCCCceEEEeCCcccH-HHHHhccchHHhhhHhhCceEEEeehhc-------------cccCCCCcchhccChhhh-ccc
Confidence 3434899998987773 44432 22333333 56788999999 9988543221 1 222
Q ss_pred chHHHHHHHHHHHHHhC------CccEEEEEeChhHHHHHHHHHhCCcccceeeEecc
Q psy4974 160 YIEEDVDIAYELLKLLG------VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGT 211 (345)
Q Consensus 160 ~~~~~~~~~~~~l~~~~------~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 211 (345)
+.++...|...++..+. ..+++.+|-|.||++|..+=.++|+.|.+...-+.
T Consensus 143 tseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSA 200 (492)
T KOG2183|consen 143 TSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASA 200 (492)
T ss_pred cHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccC
Confidence 34455556666665553 23899999999999999999999998877665554
No 197
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.85 E-value=0.012 Score=49.67 Aligned_cols=38 Identities=13% Similarity=0.304 Sum_probs=34.2
Q ss_pred CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 177 VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 177 ~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.++-.|+|||+||.+++.....+|+.+...++++|...
T Consensus 136 ~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 136 SERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred cccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 34789999999999999999999999999999998654
No 198
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.63 E-value=0.0056 Score=51.21 Aligned_cols=50 Identities=16% Similarity=0.220 Sum_probs=37.5
Q ss_pred HHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCC----cccceeeEeccCCCC
Q psy4974 165 VDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP----HMVHKLVIWGTKSFL 215 (345)
Q Consensus 165 ~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~~~~ 215 (345)
++.+..+++..+ .++.+.|||.||.+|..+|...+ ++|.++...+++...
T Consensus 72 ~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 72 LAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 444555555554 36999999999999999988743 478888888887653
No 199
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.62 E-value=0.0051 Score=57.72 Aligned_cols=90 Identities=7% Similarity=-0.095 Sum_probs=52.5
Q ss_pred hhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH----HhCCccEEEE
Q psy4974 108 NSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK----LLGVCKVSLF 183 (345)
Q Consensus 108 ~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~i~lv 183 (345)
..|..+++.|++.||. .-++.| ....-+.... ..+..+++...+..+++ .-+-+|++|+
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~g-------------APYDWRls~~--~le~rd~YF~rLK~lIE~ay~~nggkKVVLV 218 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYM-------------AAYDWRLSFQ--NTEVRDQTLSRLKSNIELMVATNGGKKVVVV 218 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceee-------------cccccccCcc--chhhhhHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 5678999999998886 344444 2111000000 01111222233333333 2235799999
Q ss_pred EeChhHHHHHHHHHhCC---------------cccceeeEeccCCC
Q psy4974 184 GWCDGGHLSFVFSMKYP---------------HMVHKLVIWGTKSF 214 (345)
Q Consensus 184 GhS~Gg~ia~~~a~~~p---------------~~v~~lvl~~~~~~ 214 (345)
||||||.+++.+..... ..|+++|.++++..
T Consensus 219 ~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 219 PHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred EeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccC
Confidence 99999999999765321 24788999888644
No 200
>KOG2237|consensus
Probab=96.50 E-value=0.023 Score=53.44 Aligned_cols=113 Identities=17% Similarity=0.195 Sum_probs=70.7
Q ss_pred CCceEEEEcCcCCCc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC-CccchHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV-PFQYIEEDVDIAY 169 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~-~~~~~~~~~~~~~ 169 (345)
.+|.+|..+|+.+-+ ...|+.-.--|.+.|+.....|.|| |- ++|..-...+... -...+.+....+.
T Consensus 469 ~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRG-------GG---e~G~~WHk~G~lakKqN~f~Dfia~Ae 538 (712)
T KOG2237|consen 469 SKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRG-------GG---EYGEQWHKDGRLAKKQNSFDDFIACAE 538 (712)
T ss_pred CCceEEEEecccceeeccccccceeEEEecceEEEEEeecc-------Cc---ccccchhhccchhhhcccHHHHHHHHH
Confidence 347788888765542 2445544444556889888999999 11 1333211111000 1224444454444
Q ss_pred HHHHHh--CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 170 ELLKLL--GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 170 ~~l~~~--~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.++++- ...+..+.|.|.||.++..++-++|+.+.++|+-.|...
T Consensus 539 yLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 539 YLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred HHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 444431 234899999999999999999999999999888776544
No 201
>KOG1202|consensus
Probab=96.41 E-value=0.19 Score=51.06 Aligned_cols=99 Identities=17% Similarity=0.267 Sum_probs=68.4
Q ss_pred CCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 90 GSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 90 g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
.+..|+++|+|..-|.. ..+..++..|. .|- ||.... +.- +.+++++.+....
T Consensus 2120 ~se~~~~Ffv~pIEG~t-t~l~~la~rle----------~Pa-------------YglQ~T--~~v-P~dSies~A~~yi 2172 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFT-TALESLASRLE----------IPA-------------YGLQCT--EAV-PLDSIESLAAYYI 2172 (2376)
T ss_pred cccCCceEEEeccccch-HHHHHHHhhcC----------Ccc-------------hhhhcc--ccC-CcchHHHHHHHHH
Confidence 34557999999998884 67776665543 233 443321 111 5567888888777
Q ss_pred HHHHHhCC-ccEEEEEeChhHHHHHHHHHhCC--cccceeeEeccCCCC
Q psy4974 170 ELLKLLGV-CKVSLFGWCDGGHLSFVFSMKYP--HMVHKLVIWGTKSFL 215 (345)
Q Consensus 170 ~~l~~~~~-~~i~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~ 215 (345)
.-++++.. .++.++|+|+|+.++..+|.... +....+|++++.+..
T Consensus 2173 rqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2173 RQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred HHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 77777654 48999999999999999987642 335669999886543
No 202
>KOG2369|consensus
Probab=96.39 E-value=0.0049 Score=55.89 Aligned_cols=88 Identities=17% Similarity=0.097 Sum_probs=56.3
Q ss_pred hhhHHHHHHhhCCCCeE------EEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccE
Q psy4974 107 RNSFKKQLTAFDPKLFT------SIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKV 180 (345)
Q Consensus 107 ~~~~~~~~~~L~~~G~~------vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i 180 (345)
...|..+++.|..-||. -..+|+|- |-...+. ....+.++...++...+.-|.+|+
T Consensus 123 y~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl----------------s~~~~e~--rd~yl~kLK~~iE~~~~~~G~kkV 184 (473)
T KOG2369|consen 123 YWYWHELIENLVGIGYERGKTLFGAPYDWRL----------------SYHNSEE--RDQYLSKLKKKIETMYKLNGGKKV 184 (473)
T ss_pred hHHHHHHHHHHHhhCcccCceeeccccchhh----------------ccCChhH--HHHHHHHHHHHHHHHHHHcCCCce
Confidence 35888999999887776 34567665 1111110 111233444444444444466899
Q ss_pred EEEEeChhHHHHHHHHHhCCc--------ccceeeEeccC
Q psy4974 181 SLFGWCDGGHLSFVFSMKYPH--------MVHKLVIWGTK 212 (345)
Q Consensus 181 ~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~ 212 (345)
+|++|||||.+.+++...+++ -|++++-++++
T Consensus 185 vlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 185 VLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred EEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCch
Confidence 999999999999999988765 26666666653
No 203
>KOG2521|consensus
Probab=96.34 E-value=0.058 Score=47.89 Aligned_cols=232 Identities=11% Similarity=0.104 Sum_probs=116.3
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
...+||++=||.|..............+.||.++.+-.|. +-..-.... ...+.......+.++
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~-------------~~~~~~~s~---~~~sl~~~~~~l~~L 100 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPC-------------PSVFLSASR---RILSLSLASTRLSEL 100 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcc-------------ccccccccc---ccchhhHHHHHHHHH
Confidence 3337777778888743444455566677799999999888 433211111 111333445666677
Q ss_pred HHHhC--CccEEEEEeChhHHHHHHHH---Hh-C-C---cccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHH
Q psy4974 172 LKLLG--VCKVSLFGWCDGGHLSFVFS---MK-Y-P---HMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVL 241 (345)
Q Consensus 172 l~~~~--~~~i~lvGhS~Gg~ia~~~a---~~-~-p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
+.... ..+++.--+|+||...+... .. + | +...++++.+.+............ ..............
T Consensus 101 ~~~~~~~~~pi~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~---~~~~~~~~~~~~~~ 177 (350)
T KOG2521|consen 101 LSDYNSDPCPIIFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAV---SFSSPPDDYVARWA 177 (350)
T ss_pred hhhccCCcCceEEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhccee---ccccCchhhHHHHH
Confidence 76665 44778889999997655433 11 2 2 345566666654432111100000 00000000000000
Q ss_pred H-HcccCCc-hhhhh-HHHHHHHHHH---HHHhhCc-hhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----C
Q psy4974 242 K-AYDNDVN-YITGI-FNQYVDMVNL---IFKSYGR-NVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----F 310 (345)
Q Consensus 242 ~-~~~~~~~-~~~~~-~~~~~~~~~~---~~~~~~~-~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~ 310 (345)
+ .+..... +.... -......+.. +...... +.+...-.....+.+.+.+..|.++|....+++.+... +
T Consensus 178 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~ 257 (350)
T KOG2521|consen 178 RLNYHITLLTMAGNEGGAYLLGPLAEKISMSRKYHFLDRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVN 257 (350)
T ss_pred hcCeEEEEEEeeecccchhhhhhhhhccccccchHHHHHHHhhhhcccccceeecCCccccccHHHHHHHHHHHHhcCce
Confidence 0 0000000 00000 0000000000 0000000 00111122235578899999999999988888754432 3
Q ss_pred cEEEEeCCCCCcccc-cChHHHHHHHHHHHHhh
Q psy4974 311 CQYYQFSSGGHSCHI-KHGQVFNEISRNFILEE 342 (345)
Q Consensus 311 ~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~ 342 (345)
++.+-+.++-|..+. ..|..+.+...+|++..
T Consensus 258 v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 258 VKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred EEEeeccCccceeeeccCcHHHHHHHHHHHHhc
Confidence 455667789998877 57999999999999754
No 204
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=96.12 E-value=0.015 Score=42.69 Aligned_cols=39 Identities=33% Similarity=0.321 Sum_probs=24.7
Q ss_pred eeeEEEcCceEEEEEcCC---CCceEEEEcCcCCCchhhHHHH
Q psy4974 74 EGFFSIKGCDIRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQ 113 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~ 113 (345)
...++++|..||+....+ +..||||+|||+||- ..|..+
T Consensus 70 hf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf-~Ef~~v 111 (112)
T PF06441_consen 70 HFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSF-LEFLKV 111 (112)
T ss_dssp EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--G-GGGHHH
T ss_pred CeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccH-HhHHhh
Confidence 555678999999987643 335999999999994 666554
No 205
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.09 E-value=0.011 Score=49.76 Aligned_cols=28 Identities=25% Similarity=0.352 Sum_probs=21.6
Q ss_pred HHHhCCccEEEEEeChhHHHHHHHHHhC
Q psy4974 172 LKLLGVCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 172 l~~~~~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
+++....++++.|||+||.+|..++...
T Consensus 122 ~~~~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 122 LKQYPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HhhCCCceEEEEccCHHHHHHHHHHHHH
Confidence 3333445899999999999999888753
No 206
>PLN02162 triacylglycerol lipase
Probab=95.81 E-value=0.042 Score=50.35 Aligned_cols=35 Identities=23% Similarity=0.158 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHH
Q psy4974 163 EDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSM 197 (345)
Q Consensus 163 ~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~ 197 (345)
+..+.+.+++.+....++++.|||+||.+|..+|.
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 33445555666655568999999999999998765
No 207
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.78 E-value=0.048 Score=42.62 Aligned_cols=37 Identities=16% Similarity=0.179 Sum_probs=33.2
Q ss_pred ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 178 CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 178 ~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
....+-|-||||+.|..+.-++|+...++|.+++...
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 4567889999999999999999999999999998655
No 208
>PLN00413 triacylglycerol lipase
Probab=95.70 E-value=0.05 Score=49.98 Aligned_cols=52 Identities=17% Similarity=0.195 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHh----C----CcccceeeEeccCCC
Q psy4974 163 EDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMK----Y----PHMVHKLVIWGTKSF 214 (345)
Q Consensus 163 ~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~----~----p~~v~~lvl~~~~~~ 214 (345)
+..+.+.++++.....++++.|||+||.+|..+|.. . ..++.++...+.+-.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRV 328 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRV 328 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCC
Confidence 456667777777766689999999999999988752 1 123445566655433
No 209
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=95.62 E-value=0.12 Score=45.63 Aligned_cols=157 Identities=13% Similarity=0.173 Sum_probs=85.8
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhcc-CCChhhHHHHHHHcccCC
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS-NWSPMARSEVLKAYDNDV 248 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 248 (345)
..+.++.++.+.+-|-|--|+.++..|...| +|.++|-...-.. ..........+... .|+........+-..+.
T Consensus 226 ~eL~q~~Ik~F~VTGaSKRgWttwLTAIaDp-rv~aIvp~v~D~L--ni~a~L~hiyrsYGgnwpi~l~pyyaegi~er- 301 (507)
T COG4287 226 DELEQVEIKGFMVTGASKRGWTTWLTAIADP-RVFAIVPFVYDNL--NIEAQLLHIYRSYGGNWPIKLAPYYAEGIDER- 301 (507)
T ss_pred hhhhheeeeeEEEeccccchHHHHHHHhcCc-chhhhhhhHHhhc--ccHHHHHHHHHhhCCCCCcccchhHhhhHHHh-
Confidence 4455567788999999999999999888776 5666653222111 00111111111111 22222221111111111
Q ss_pred chhhhhHHHHHHHHHHHHHhhCchhh--hccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCc-EEEEeCCCCCcccc
Q psy4974 249 NYITGIFNQYVDMVNLIFKSYGRNVY--QELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFC-QYYQFSSGGHSCHI 325 (345)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~ 325 (345)
.-...+ .......+...+ .....++..|-.++.|+.|.+.++..+....+.+|+. .+..+|+..|...
T Consensus 302 -l~tp~f-------kqL~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~- 372 (507)
T COG4287 302 -LETPLF-------KQLLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI- 372 (507)
T ss_pred -hcCHHH-------HHHHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh-
Confidence 001111 111111111111 1112456789999999999999999999999999975 5667899999876
Q ss_pred cChHHHHHHHHHHHHh
Q psy4974 326 KHGQVFNEISRNFILE 341 (345)
Q Consensus 326 ~~~~~~~~~i~~fl~~ 341 (345)
++.+.+.+..|+++
T Consensus 373 --n~~i~esl~~flnr 386 (507)
T COG4287 373 --NQFIKESLEPFLNR 386 (507)
T ss_pred --HHHHHHHHHHHHHH
Confidence 44555556666543
No 210
>PLN02454 triacylglycerol lipase
Probab=95.31 E-value=0.031 Score=50.61 Aligned_cols=34 Identities=21% Similarity=0.183 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHh
Q psy4974 165 VDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 165 ~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~ 198 (345)
...+..+++..... +|++.|||+||.+|+.+|..
T Consensus 213 l~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 213 LAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 44445555555434 49999999999999998854
No 211
>KOG1516|consensus
Probab=95.30 E-value=0.074 Score=51.15 Aligned_cols=114 Identities=15% Similarity=0.087 Sum_probs=64.2
Q ss_pred CceEEEEcCcCCCc--hhhH--HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEI--RNSF--KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 93 ~p~vv~lHG~~~~~--~~~~--~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
.|++|++||++-.. ...+ ......+.....-|+.+.+|= =+-|+.+ .|.+.. ...+ .+.+.....+++
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRL----G~lGF~s--t~d~~~-~gN~-gl~Dq~~AL~wv 183 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRL----GPLGFLS--TGDSAA-PGNL-GLFDQLLALRWV 183 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccc----eeceeee--cCCCCC-CCcc-cHHHHHHHHHHH
Confidence 58999999986431 1222 112223334347788888764 0112210 222222 3444 333333334555
Q ss_pred HHHHHHhCC--ccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCC
Q psy4974 169 YELLKLLGV--CKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSF 214 (345)
Q Consensus 169 ~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 214 (345)
.+-+...|- ++|.|+|||.||..+..+.... ...+.++|..++...
T Consensus 184 ~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 184 KDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred HHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 566666664 4899999999999887766531 245677777776544
No 212
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=95.28 E-value=0.076 Score=42.53 Aligned_cols=54 Identities=13% Similarity=0.118 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHHHHhC-----CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 161 IEEDVDIAYELLKLLG-----VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 161 ~~~~~~~~~~~l~~~~-----~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
-++-+..+..+++.+. ..++.++|||+|+.++-..+...+..+..+|+++++..
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 3445666667766553 23789999999999998888776678999999987654
No 213
>PLN02571 triacylglycerol lipase
Probab=95.18 E-value=0.033 Score=50.51 Aligned_cols=37 Identities=11% Similarity=0.154 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHh
Q psy4974 162 EEDVDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~ 198 (345)
++..+++..+++....+ ++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 44556666777665433 68999999999999998864
No 214
>KOG2182|consensus
Probab=95.12 E-value=0.15 Score=46.79 Aligned_cols=83 Identities=24% Similarity=0.231 Sum_probs=63.1
Q ss_pred CCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC----CCCCccchHHHHHHHHHHHHHhCC-------ccEEEEEeC
Q psy4974 118 DPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR----SFVPFQYIEEDVDIAYELLKLLGV-------CKVSLFGWC 186 (345)
Q Consensus 118 ~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~-------~~i~lvGhS 186 (345)
++.|-.|+.+++|- +|.|.+-.. .. ..-+..+...|+.++++++.. .|.+.+|-|
T Consensus 115 kkfgA~v~~lEHRF-------------YG~S~P~~~~st~nl-k~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgS 180 (514)
T KOG2182|consen 115 KKFGATVFQLEHRF-------------YGQSSPIGDLSTSNL-KYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGS 180 (514)
T ss_pred HHhCCeeEEeeeec-------------cccCCCCCCCcccch-hhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCC
Confidence 34478999999999 998854321 11 223456667888888887642 289999999
Q ss_pred hhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 187 DGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 187 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.-|.++..+=.++|+.+.+.|.-+++..
T Consensus 181 YsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 181 YSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred chhHHHHHHHHhCchhheeeccccccee
Confidence 9999999999999999988887776544
No 215
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=95.06 E-value=0.053 Score=35.22 Aligned_cols=41 Identities=10% Similarity=0.122 Sum_probs=21.4
Q ss_pred CCcceeeeEEE-cCceEEEEEcC--C-------CCceEEEEcCcCCCchhhH
Q psy4974 69 QDVFTEGFFSI-KGCDIRFIKYG--S-------GAQVLFFTYGVLGEIRNSF 110 (345)
Q Consensus 69 ~~~~~~~~~~~-~g~~l~~~~~g--~-------~~p~vv~lHG~~~~~~~~~ 110 (345)
+...+++.+.. ||+-|...... . .+|+|++.||+.+++ ..|
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss-~~w 59 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSS-DDW 59 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--G-GGG
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccCh-HHH
Confidence 34445666666 88887765432 2 347999999999996 777
No 216
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.94 E-value=0.068 Score=43.11 Aligned_cols=48 Identities=15% Similarity=0.132 Sum_probs=34.6
Q ss_pred HHHHHHHHhCCccEEEEEeChhHHHHHHHHHh--C----CcccceeeEeccCCC
Q psy4974 167 IAYELLKLLGVCKVSLFGWCDGGHLSFVFSMK--Y----PHMVHKLVIWGTKSF 214 (345)
Q Consensus 167 ~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~--~----p~~v~~lvl~~~~~~ 214 (345)
.+.+....-.-.+++|+|+|.|+.++..++.. . .++|.++++++-+..
T Consensus 70 ~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 70 LIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 33333344445599999999999999998877 2 357899999887654
No 217
>KOG4372|consensus
Probab=94.91 E-value=0.03 Score=50.02 Aligned_cols=102 Identities=15% Similarity=0.083 Sum_probs=54.7
Q ss_pred cCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCC-CCCCCCCCCc
Q psy4974 80 KGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQS-LPKGRSFVPF 158 (345)
Q Consensus 80 ~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s-~~~~~~~~~~ 158 (345)
+..++.+....+++-.+|+.||+.+.....|...+...... +.=..+..+| +-.. ....... ..
T Consensus 67 ~~w~~p~~~~~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g-------------~~~~~~~T~~Gv-~~ 131 (405)
T KOG4372|consen 67 DLWDLPYSFPTKPKHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRG-------------KMNNMCQTFDGV-DV 131 (405)
T ss_pred ccccCCcccccCCceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeec-------------cccchhhccccc-ee
Confidence 44444442222232489999999883247787777766655 2222333344 1111 1001000 00
Q ss_pred cchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHH
Q psy4974 159 QYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSM 197 (345)
Q Consensus 159 ~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~ 197 (345)
-=+..++++.+.+....++++..+|||+||.++..+..
T Consensus 132 -lG~Rla~~~~e~~~~~si~kISfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 132 -LGERLAEEVKETLYDYSIEKISFVGHSLGGLVARYAIG 169 (405)
T ss_pred -eecccHHHHhhhhhccccceeeeeeeecCCeeeeEEEE
Confidence 01223445555555555789999999999998765443
No 218
>PLN02408 phospholipase A1
Probab=94.88 E-value=0.046 Score=48.81 Aligned_cols=35 Identities=17% Similarity=0.161 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHh
Q psy4974 164 DVDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 164 ~~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~ 198 (345)
..+.+..+++..+.+ +|++.|||+||.+|..+|..
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 345566666665533 58999999999999988865
No 219
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=94.86 E-value=0.16 Score=43.74 Aligned_cols=36 Identities=17% Similarity=0.165 Sum_probs=32.6
Q ss_pred cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 179 KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 179 ~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.-+|+|-|+||.+++..+..+|+.+..++..+|...
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 568999999999999999999999999998888655
No 220
>PLN02934 triacylglycerol lipase
Probab=94.72 E-value=0.053 Score=50.22 Aligned_cols=36 Identities=25% Similarity=0.208 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHH
Q psy4974 162 EEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSM 197 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~ 197 (345)
.+....+.+++++....++++.|||+||.+|..+|.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 345566667777766669999999999999998874
No 221
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=94.63 E-value=0.078 Score=43.43 Aligned_cols=39 Identities=10% Similarity=-0.084 Sum_probs=30.6
Q ss_pred hHHHHHHHHHHHHHhCC-ccEEEEEeChhHHHHHHHHHhC
Q psy4974 161 IEEDVDIAYELLKLLGV-CKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 161 ~~~~~~~~~~~l~~~~~-~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
+.+..+....++++.+. ++++|+|||.|+.+...+....
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 44556666677887754 4999999999999999988764
No 222
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=94.54 E-value=0.16 Score=45.27 Aligned_cols=41 Identities=20% Similarity=0.330 Sum_probs=31.9
Q ss_pred CCccEEEEEeChhHHHHHHHHHhCCc-----ccceeeEeccCCCCC
Q psy4974 176 GVCKVSLFGWCDGGHLSFVFSMKYPH-----MVHKLVIWGTKSFLT 216 (345)
Q Consensus 176 ~~~~i~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~ 216 (345)
+.+|+.|+|||+|+.+...+.....+ .|..+++++.+....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 66699999999999998876655433 389999998776643
No 223
>PLN02324 triacylglycerol lipase
Probab=94.29 E-value=0.076 Score=48.15 Aligned_cols=35 Identities=17% Similarity=0.131 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHh
Q psy4974 164 DVDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 164 ~~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~ 198 (345)
..+.+..+++....+ +|++.|||+||.+|...|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 345566677765532 69999999999999988853
No 224
>PLN02310 triacylglycerol lipase
Probab=94.26 E-value=0.2 Score=45.45 Aligned_cols=37 Identities=16% Similarity=0.285 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHhC---C-ccEEEEEeChhHHHHHHHHHh
Q psy4974 162 EEDVDIAYELLKLLG---V-CKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~---~-~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
++..+.+.++++.+. . .++.+.|||+||.+|+..|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344556666666552 1 379999999999999988753
No 225
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=94.00 E-value=4 Score=37.93 Aligned_cols=106 Identities=16% Similarity=0.207 Sum_probs=64.1
Q ss_pred EEEEcCCC-CceEEEEcCcCCCchhhHHH--HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccch
Q psy4974 85 RFIKYGSG-AQVLFFTYGVLGEIRNSFKK--QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYI 161 (345)
Q Consensus 85 ~~~~~g~~-~p~vv~lHG~~~~~~~~~~~--~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~ 161 (345)
+|...|+= +|..|.+.|.-.. +.|+. +.+.|..- -.+.-|.|- -|.+--.. .+.+
T Consensus 280 yYFnPGD~KPPL~VYFSGyR~a--EGFEgy~MMk~Lg~P--fLL~~DpRl-------------eGGaFYlG-----s~ey 337 (511)
T TIGR03712 280 YYFNPGDFKPPLNVYFSGYRPA--EGFEGYFMMKRLGAP--FLLIGDPRL-------------EGGAFYLG-----SDEY 337 (511)
T ss_pred EecCCcCCCCCeEEeeccCccc--CcchhHHHHHhcCCC--eEEeecccc-------------ccceeeeC-----cHHH
Confidence 34445553 3567888887653 44433 33444332 344557776 44442111 1123
Q ss_pred HHH-HHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 162 EED-VDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 162 ~~~-~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
++. .+-+.+.++.++.+ .++|-|-|||..-|+.++++.. ..++|+--|...
T Consensus 338 E~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~N 391 (511)
T TIGR03712 338 EQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVN 391 (511)
T ss_pred HHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccc
Confidence 333 45555778888876 7999999999999999998863 456666555443
No 226
>PLN02753 triacylglycerol lipase
Probab=93.72 E-value=0.11 Score=48.40 Aligned_cols=37 Identities=19% Similarity=0.259 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHhCC-----ccEEEEEeChhHHHHHHHHHh
Q psy4974 162 EEDVDIAYELLKLLGV-----CKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~~-----~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
++..+.+..+++..+. -+|.+.|||+||.+|...|..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 3445556666666532 389999999999999998853
No 227
>PLN02802 triacylglycerol lipase
Probab=93.69 E-value=0.11 Score=48.16 Aligned_cols=35 Identities=14% Similarity=0.153 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHh
Q psy4974 164 DVDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 164 ~~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~ 198 (345)
..+.+..+++...-+ +|++.|||+||.+|...|..
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 344555666655432 68999999999999988764
No 228
>PLN02719 triacylglycerol lipase
Probab=93.34 E-value=0.14 Score=47.63 Aligned_cols=36 Identities=17% Similarity=0.256 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhCC-----ccEEEEEeChhHHHHHHHHHh
Q psy4974 163 EDVDIAYELLKLLGV-----CKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 163 ~~~~~~~~~l~~~~~-----~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
+..+.+..+++.... .+|.+.|||+||.+|...|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344555566665532 279999999999999998753
No 229
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.15 E-value=0.14 Score=47.59 Aligned_cols=36 Identities=14% Similarity=0.303 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhC---C-ccEEEEEeChhHHHHHHHHHh
Q psy4974 163 EDVDIAYELLKLLG---V-CKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 163 ~~~~~~~~~l~~~~---~-~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
+..+++..+++.+. . .++.+.|||+||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34556666666553 1 269999999999999988854
No 230
>PLN02761 lipase class 3 family protein
Probab=93.09 E-value=0.15 Score=47.46 Aligned_cols=36 Identities=19% Similarity=0.296 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHhC-----C-ccEEEEEeChhHHHHHHHHH
Q psy4974 162 EEDVDIAYELLKLLG-----V-CKVSLFGWCDGGHLSFVFSM 197 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~-----~-~~i~lvGhS~Gg~ia~~~a~ 197 (345)
++..+.+..+++..+ . -+|.+.|||+||.+|...|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 344556666666552 1 27999999999999998875
No 231
>KOG2029|consensus
Probab=92.71 E-value=0.52 Score=44.39 Aligned_cols=49 Identities=16% Similarity=0.221 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhC---CccEEEEEeChhHHHHHHHHHh-----CCc------ccceeeEeccCC
Q psy4974 165 VDIAYELLKLLG---VCKVSLFGWCDGGHLSFVFSMK-----YPH------MVHKLVIWGTKS 213 (345)
Q Consensus 165 ~~~~~~~l~~~~---~~~i~lvGhS~Gg~ia~~~a~~-----~p~------~v~~lvl~~~~~ 213 (345)
...+.+.+.+.+ -++|+.+||||||.++=.+... .|+ .-+++|+++.+-
T Consensus 510 s~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 510 SNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 334444444433 3489999999999887665443 232 356778777653
No 232
>KOG4569|consensus
Probab=91.87 E-value=0.27 Score=43.97 Aligned_cols=37 Identities=16% Similarity=0.134 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHh
Q psy4974 162 EEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
..+.+++..+++...--++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 3455666777777775689999999999999988864
No 233
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=91.72 E-value=0.38 Score=38.77 Aligned_cols=61 Identities=15% Similarity=0.100 Sum_probs=45.6
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHhh---cCC--cEEEEeCCCCCcccccC---hHHHHHHHHHHHHhh
Q psy4974 282 DVPVLVFHSADDVMVSTQQVQSLLNQ---LKF--CQYYQFSSGGHSCHIKH---GQVFNEISRNFILEE 342 (345)
Q Consensus 282 ~~Pvl~i~G~~D~~v~~~~~~~~~~~---~~~--~~~~~~~~~gH~~~~~~---~~~~~~~i~~fl~~~ 342 (345)
++++|-|-|+.|.++...+....... +|. ...++.+++||+....- .+++...|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 46788899999999987655555444 442 36677889999977653 478889999998763
No 234
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=91.07 E-value=1.8 Score=31.12 Aligned_cols=89 Identities=17% Similarity=0.079 Sum_probs=59.1
Q ss_pred CCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEE
Q psy4974 104 GEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLF 183 (345)
Q Consensus 104 ~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lv 183 (345)
.+++..|..+.+.+..+||..=.+.++. +|.+-... + .....+.-...+..+++.+...+++++
T Consensus 7 ~SPwnly~~l~~Fl~~~~~P~G~~~Lr~-------------~~~~~~~~--~-~~~~~~~K~~~i~~i~~~fP~~kfiLI 70 (100)
T PF09949_consen 7 NSPWNLYPFLRDFLRRNGFPAGPLLLRD-------------YGPSLSGL--F-KSGAEEHKRDNIERILRDFPERKFILI 70 (100)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCceEccc-------------CCcccccc--c-cCCchhHHHHHHHHHHHHCCCCcEEEE
Confidence 3445666777777777777766677776 64442111 0 111112446678888999988899999
Q ss_pred EeChhH--HHHHHHHHhCCcccceeeE
Q psy4974 184 GWCDGG--HLSFVFSMKYPHMVHKLVI 208 (345)
Q Consensus 184 GhS~Gg--~ia~~~a~~~p~~v~~lvl 208 (345)
|-|--. -+-..+|.++|++|.++.+
T Consensus 71 GDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 71 GDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred eeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 998655 3445578889999988765
No 235
>PLN02847 triacylglycerol lipase
Probab=90.76 E-value=0.44 Score=45.15 Aligned_cols=21 Identities=19% Similarity=0.362 Sum_probs=18.3
Q ss_pred ccEEEEEeChhHHHHHHHHHh
Q psy4974 178 CKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 178 ~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 389999999999999887764
No 236
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=90.40 E-value=2.3 Score=39.57 Aligned_cols=103 Identities=20% Similarity=0.145 Sum_probs=58.4
Q ss_pred CceEEEEcCcCCCchhhHHHHHHh-------------------hCCCCeEEEEeC-CCCchhhhccCCccCCCCCCCC--
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTA-------------------FDPKLFTSIFWD-PPGNVVLYLLGKTCSGYGQSLP-- 150 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~-------------------L~~~G~~vi~~D-~~G~~~~~~~g~~~~~~G~s~~-- 150 (345)
+|.++++.|++|++ ..|-.+.+. +.+. -.++.+| .-| -|.|..
T Consensus 101 rPvi~wlNGGPGcS-S~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvG-------------TGfS~a~~ 165 (498)
T COG2939 101 RPVIFWLNGGPGCS-SVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVG-------------TGFSRALG 165 (498)
T ss_pred CceEEEecCCCChH-hhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcc-------------cCcccccc
Confidence 47999999999996 666554321 0011 3577788 446 666653
Q ss_pred CCCCCCCccchHHHHHHHH----HHHHHhCC--ccEEEEEeChhHHHHHHHHHhCCc---ccceeeEecc
Q psy4974 151 KGRSFVPFQYIEEDVDIAY----ELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYPH---MVHKLVIWGT 211 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~----~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~ 211 (345)
.+..- +.....+++..+. +.+.+..- .+.+|+|-|.||.-+..+|...-+ ..++++.+.+
T Consensus 166 ~e~~~-d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlss 234 (498)
T COG2939 166 DEKKK-DFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSS 234 (498)
T ss_pred ccccc-chhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeee
Confidence 22111 2222222232222 22223332 389999999999988888765333 2566666554
No 237
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=89.63 E-value=0.75 Score=39.26 Aligned_cols=40 Identities=10% Similarity=0.267 Sum_probs=27.8
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEecc
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGT 211 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 211 (345)
.+.+...-.++.+.|||+||.+|..+..++. +-.+.+-+|
T Consensus 268 ~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 268 AVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 4444445558999999999999999888764 333444443
No 238
>KOG4540|consensus
Probab=89.63 E-value=0.75 Score=39.26 Aligned_cols=40 Identities=10% Similarity=0.267 Sum_probs=27.8
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEecc
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGT 211 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 211 (345)
.+.+...-.++.+.|||+||.+|..+..++. +-.+.+-+|
T Consensus 268 ~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 268 AVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 4444445558999999999999999888764 333444443
No 239
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=87.91 E-value=3 Score=34.99 Aligned_cols=53 Identities=15% Similarity=0.197 Sum_probs=32.4
Q ss_pred chHHHHHHHHHHHHH-h-CCccEEEEEeChhHHHHHHHHHhCC------cccceeeEeccC
Q psy4974 160 YIEEDVDIAYELLKL-L-GVCKVSLFGWCDGGHLSFVFSMKYP------HMVHKLVIWGTK 212 (345)
Q Consensus 160 ~~~~~~~~~~~~l~~-~-~~~~i~lvGhS~Gg~ia~~~a~~~p------~~v~~lvl~~~~ 212 (345)
+..+-++.+.+.++. . .-++++++|+|+|+.++...+.+.- ...-.+|+++-+
T Consensus 28 Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP 88 (225)
T PF08237_consen 28 SVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNP 88 (225)
T ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCC
Confidence 344444555544444 1 2368999999999999888776531 123356666544
No 240
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=84.81 E-value=1.4 Score=41.60 Aligned_cols=60 Identities=10% Similarity=0.145 Sum_probs=45.7
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHhhc----C--------CcEEEEeCCCCCccccc--ChHHHHHHHHHHHHhh
Q psy4974 283 VPVLVFHSADDVMVSTQQVQSLLNQL----K--------FCQYYQFSSGGHSCHIK--HGQVFNEISRNFILEE 342 (345)
Q Consensus 283 ~Pvl~i~G~~D~~v~~~~~~~~~~~~----~--------~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~~ 342 (345)
-.+++.||..|.++|+.....+.+++ . -.++..+||.+|+.--. .+-.....|.+|.++-
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 57999999999999987766665544 1 14788999999986443 4556788899998753
No 241
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=83.59 E-value=22 Score=32.12 Aligned_cols=86 Identities=13% Similarity=0.069 Sum_probs=60.1
Q ss_pred eEEEEcCcCCC------chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 95 VLFFTYGVLGE------IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 95 ~vv~lHG~~~~------~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
.||++||-+.+ ....|..+++.+.++| .+-.+|..- .|..+ .+++++..+
T Consensus 173 ~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~-lip~~D~AY-------------QGF~~----------GleeDa~~l 228 (396)
T COG1448 173 SVVLLHGCCHNPTGIDPTEEQWQELADLIKERG-LIPFFDIAY-------------QGFAD----------GLEEDAYAL 228 (396)
T ss_pred CEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-Ceeeeehhh-------------hhhcc----------chHHHHHHH
Confidence 69999997655 2588999999998884 445566554 43331 356667767
Q ss_pred HHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccC
Q psy4974 169 YELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTK 212 (345)
Q Consensus 169 ~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 212 (345)
..++.... -.++..|+.=.+++ |.+||-++.+++..
T Consensus 229 R~~a~~~~---~~lva~S~SKnfgL-----YgERVGa~~vva~~ 264 (396)
T COG1448 229 RLFAEVGP---ELLVASSFSKNFGL-----YGERVGALSVVAED 264 (396)
T ss_pred HHHHHhCC---cEEEEehhhhhhhh-----hhhccceeEEEeCC
Confidence 76666533 38888888777665 56889999988663
No 242
>KOG1283|consensus
Probab=82.38 E-value=5.9 Score=34.74 Aligned_cols=107 Identities=18% Similarity=0.142 Sum_probs=68.4
Q ss_pred CCceEEEEcCcCCCchhh---HHHHHH-----------hhCCCCeEEEEeCCC-CchhhhccCCccCCCCCCCCCCCCCC
Q psy4974 92 GAQVLFFTYGVLGEIRNS---FKKQLT-----------AFDPKLFTSIFWDPP-GNVVLYLLGKTCSGYGQSLPKGRSFV 156 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~---~~~~~~-----------~L~~~G~~vi~~D~~-G~~~~~~~g~~~~~~G~s~~~~~~~~ 156 (345)
.+|..+.+.|.++.+... |+++-+ .|.. ..++.+|-| | -|.|-.....+
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVG-------------aGfSyVdg~~~- 93 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVG-------------AGFSYVDGSSA- 93 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCc-------------CceeeecCccc-
Confidence 346788898888764222 333221 1222 467888866 5 66664443333
Q ss_pred CccchHHHHHHHHHHHHHh-------CCccEEEEEeChhHHHHHHHHHhCCc---------ccceeeEeccCCC
Q psy4974 157 PFQYIEEDVDIAYELLKLL-------GVCKVSLFGWCDGGHLSFVFSMKYPH---------MVHKLVIWGTKSF 214 (345)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~-------~~~~i~lvGhS~Gg~ia~~~a~~~p~---------~v~~lvl~~~~~~ 214 (345)
...+..+.+.|+.++++.+ ...|++|+.-|.||-+|..++...-+ .+.+++|-++...
T Consensus 94 Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 94 YTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred ccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 3345677889999998875 23489999999999999888765322 3456676666544
No 243
>KOG4388|consensus
Probab=80.36 E-value=12 Score=35.60 Aligned_cols=100 Identities=19% Similarity=0.143 Sum_probs=54.1
Q ss_pred eEEEEcCcCCCc--hhhHHHHHHhhC-CCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 95 VLFFTYGVLGEI--RNSFKKQLTAFD-PKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 95 ~vv~lHG~~~~~--~~~~~~~~~~L~-~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
.|+-+||+|--. ...-+..++.++ ..|+.|+.+|+-- .|..+| +- ..++..-..-.+
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSL------------------APEaPF-PR-aleEv~fAYcW~ 457 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSL------------------APEAPF-PR-ALEEVFFAYCWA 457 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeecc------------------CCCCCC-Cc-HHHHHHHHHHHH
Confidence 578889987431 022222222222 2369999999744 233333 22 122222111222
Q ss_pred H---HHhCC--ccEEEEEeChhHHHHHHHHHh----CCcccceeeEeccCCC
Q psy4974 172 L---KLLGV--CKVSLFGWCDGGHLSFVFSMK----YPHMVHKLVIWGTKSF 214 (345)
Q Consensus 172 l---~~~~~--~~i~lvGhS~Gg~ia~~~a~~----~p~~v~~lvl~~~~~~ 214 (345)
+ ..+|. ++|+++|-|.||.+.+-.|.+ .-...+++++.-++.-
T Consensus 458 inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl 509 (880)
T KOG4388|consen 458 INNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTL 509 (880)
T ss_pred hcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhh
Confidence 2 33443 599999999999875554443 3334578888776543
No 244
>KOG2385|consensus
Probab=76.87 E-value=4.2 Score=37.88 Aligned_cols=43 Identities=16% Similarity=0.342 Sum_probs=32.7
Q ss_pred hCCccEEEEEeChhHHHHHHHHHhC-----CcccceeeEeccCCCCCc
Q psy4974 175 LGVCKVSLFGWCDGGHLSFVFSMKY-----PHMVHKLVIWGTKSFLTI 217 (345)
Q Consensus 175 ~~~~~i~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~ 217 (345)
.|.+||.|+|+|+|+.+...+.... -..|..+++++++.....
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~ 491 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKA 491 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCH
Confidence 4678999999999999888655422 235889999998776543
No 245
>KOG2872|consensus
Probab=75.55 E-value=6.2 Score=33.93 Aligned_cols=75 Identities=17% Similarity=0.175 Sum_probs=45.5
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCc---------hhhhccCCccCCCCCCCCCCCCCCCccchHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN---------VVLYLLGKTCSGYGQSLPKGRSFVPFQYIEED 164 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~---------~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~ 164 (345)
|.|+|.-|.++. ++.|+..||.|+..|+-=. ++++++|+- + |.. -+.+-+..
T Consensus 253 Pmi~fakG~g~~--------Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNl-------D-P~~---ly~s~e~i 313 (359)
T KOG2872|consen 253 PMILFAKGSGGA--------LEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNL-------D-PGV---LYGSKEEI 313 (359)
T ss_pred ceEEEEcCcchH--------HHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCC-------C-hHH---hcCCHHHH
Confidence 677777776433 4567788999999997320 123344443 1 111 22345666
Q ss_pred HHHHHHHHHHhCCccEE-EEEeCh
Q psy4974 165 VDIAYELLKLLGVCKVS-LFGWCD 187 (345)
Q Consensus 165 ~~~~~~~l~~~~~~~i~-lvGhS~ 187 (345)
.+.+.+.++..|.++.+ =+||..
T Consensus 314 t~~v~~mv~~fG~~ryI~NLGHGi 337 (359)
T KOG2872|consen 314 TQLVKQMVKDFGKSRYIANLGHGI 337 (359)
T ss_pred HHHHHHHHHHhCccceEEecCCCC
Confidence 77788888888866544 477753
No 246
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=73.84 E-value=5.9 Score=37.36 Aligned_cols=39 Identities=13% Similarity=0.161 Sum_probs=34.6
Q ss_pred CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 177 VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 177 ~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
.+.-+..|.|.||.-++..|+++|+..++++.-+|+...
T Consensus 114 p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 114 PKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred CCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHH
Confidence 346789999999999999999999999999999986543
No 247
>PRK12467 peptide synthase; Provisional
Probab=72.84 E-value=16 Score=44.23 Aligned_cols=96 Identities=11% Similarity=0.031 Sum_probs=65.5
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
+.+++.|...+.. ..+..+...|... ..++.+..++ .-.... ...++.+.+....+.+.
T Consensus 3693 ~~l~~~h~~~r~~-~~~~~l~~~l~~~-~~~~~l~~~~-------------~~~d~~------~~~~~~~~~~~y~~~~~ 3751 (3956)
T PRK12467 3693 PALFCRHEGLGTV-FDYEPLAVILEGD-RHVLGLTCRH-------------LLDDGW------QDTSLQAMAVQYADYIL 3751 (3956)
T ss_pred cceeeechhhcch-hhhHHHHHHhCCC-CcEEEEeccc-------------cccccC------CccchHHHHHHHHHHHH
Confidence 4699999998885 7788888888765 7888888766 321111 22245566666666655
Q ss_pred HhC-CccEEEEEeChhHHHHHHHHHh---CCcccceeeEec
Q psy4974 174 LLG-VCKVSLFGWCDGGHLSFVFSMK---YPHMVHKLVIWG 210 (345)
Q Consensus 174 ~~~-~~~i~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~ 210 (345)
... ..+..+.|+|+||.++..++.. ..+.+.-+.+++
T Consensus 3752 ~~~~~~p~~l~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3752 WQQAKGPYGLLGWSLGGTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred HhccCCCeeeeeeecchHHHHHHHHHHHHcCCceeEEEEEe
Confidence 543 3478999999999999988765 334555555554
No 248
>PF03283 PAE: Pectinacetylesterase
Probab=71.84 E-value=18 Score=32.80 Aligned_cols=38 Identities=21% Similarity=0.258 Sum_probs=25.1
Q ss_pred CccEEEEEeChhHHHHHHHHH----hCCcccceeeEeccCCC
Q psy4974 177 VCKVSLFGWCDGGHLSFVFSM----KYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 177 ~~~i~lvGhS~Gg~ia~~~a~----~~p~~v~~lvl~~~~~~ 214 (345)
.++++|.|.|.||.-++..+. ..|..++-..+.++...
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f 196 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFF 196 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccccc
Confidence 358999999999988877554 34544444444555444
No 249
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=68.31 E-value=6.8 Score=34.28 Aligned_cols=31 Identities=16% Similarity=0.062 Sum_probs=25.0
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHh
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
+.++++..|+++-.++|||+|-+.|+.++..
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhCC
Confidence 3355677889999999999999998877753
No 250
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=67.95 E-value=4.4 Score=35.98 Aligned_cols=31 Identities=19% Similarity=0.194 Sum_probs=25.1
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHh
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
+.++++..|+.+-.++|||+|=+.|+.++..
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCCc
Confidence 4466778888999999999999988876654
No 251
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=67.73 E-value=41 Score=29.22 Aligned_cols=28 Identities=25% Similarity=0.308 Sum_probs=21.7
Q ss_pred HHHHhC-CccEEEEEeChhHHHHHHHHHh
Q psy4974 171 LLKLLG-VCKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 171 ~l~~~~-~~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
+.+.+. .++|.++|+|-|+++|-.+|..
T Consensus 84 l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 84 LSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 334443 3589999999999999999864
No 252
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=66.23 E-value=8.1 Score=33.84 Aligned_cols=31 Identities=19% Similarity=0.104 Sum_probs=24.9
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHh
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
+.++++..++++..++|||+|=+.|..++..
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 3455677788899999999999988887754
No 253
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=63.87 E-value=28 Score=28.57 Aligned_cols=39 Identities=13% Similarity=0.102 Sum_probs=31.9
Q ss_pred chHHHHHHHHHHHHHhCCccEEEEEeCh----hHHHHHHHHHhC
Q psy4974 160 YIEEDVDIAYELLKLLGVCKVSLFGWCD----GGHLSFVFSMKY 199 (345)
Q Consensus 160 ~~~~~~~~~~~~l~~~~~~~i~lvGhS~----Gg~ia~~~a~~~ 199 (345)
+.+.+++.+.+++++.+ ..++++|+|. |..++..+|.+.
T Consensus 92 ~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarL 134 (202)
T cd01714 92 DTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELL 134 (202)
T ss_pred ChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHh
Confidence 45666888888888877 5799999998 888999988875
No 254
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=61.89 E-value=38 Score=27.94 Aligned_cols=61 Identities=20% Similarity=0.202 Sum_probs=41.5
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCe-EEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLF-TSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~-~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
.+|++.||...++...|..+-.-|.+.|| .|+....-| + | .++.+.+.+
T Consensus 139 ~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~-------------y-----P------------~~d~vi~~l 188 (265)
T COG4822 139 ILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEG-------------Y-----P------------LVDTVIEYL 188 (265)
T ss_pred EEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecC-------------C-----C------------cHHHHHHHH
Confidence 47888899988765556555556677788 666655555 2 1 166677888
Q ss_pred HHhCCccEEEEE
Q psy4974 173 KLLGVCKVSLFG 184 (345)
Q Consensus 173 ~~~~~~~i~lvG 184 (345)
+.-+++++.|+-
T Consensus 189 ~~~~~~~v~L~P 200 (265)
T COG4822 189 RKNGIKEVHLIP 200 (265)
T ss_pred HHcCCceEEEee
Confidence 888888777653
No 255
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=61.12 E-value=11 Score=32.88 Aligned_cols=30 Identities=20% Similarity=-0.014 Sum_probs=23.9
Q ss_pred HHHHHhC-CccEEEEEeChhHHHHHHHHHhC
Q psy4974 170 ELLKLLG-VCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 170 ~~l~~~~-~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
.++...+ +.+-.++|||+|=+.|+.++...
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCCC
Confidence 4556666 88999999999999888877543
No 256
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=54.93 E-value=87 Score=28.79 Aligned_cols=100 Identities=15% Similarity=0.009 Sum_probs=61.9
Q ss_pred EEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC----------CCC--C-------C
Q psy4974 97 FFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG----------RSF--V-------P 157 (345)
Q Consensus 97 v~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~----------~~~--~-------~ 157 (345)
|++=|..+.....+..+.+.+.+.|..|+.+|.-- .+....+. ... . .
T Consensus 4 I~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~-------------~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dR 70 (403)
T PF06792_consen 4 IAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGT-------------LGEPSFPPDISREEVARAAGDSIEAVRSSGDR 70 (403)
T ss_pred EEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCC-------------CCCCCCCCCcCHHHHHHhcCCChHHhhccCCH
Confidence 44446667755778888888888999999999643 22221110 000 0 0
Q ss_pred ccchHHHHHHHHHHHHHhC----CccEEEEEeChhHHHHHHHHHhCCcccceeeEe
Q psy4974 158 FQYIEEDVDIAYELLKLLG----VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIW 209 (345)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~~----~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 209 (345)
...++.+.+.+..++..+- ++-++-+|-|.|..++.......|--+-+++..
T Consensus 71 g~ai~~M~~ga~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 71 GEAIEAMARGAARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 0123334445555555442 456788999999999999988887656565543
No 257
>KOG0781|consensus
Probab=54.57 E-value=41 Score=31.51 Aligned_cols=85 Identities=14% Similarity=0.080 Sum_probs=51.9
Q ss_pred cCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCcc
Q psy4974 100 YGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCK 179 (345)
Q Consensus 100 HG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 179 (345)
-|++.++...-...+++-..+||.|+.+|-.| .-.. -..+...+..+++.-..+.
T Consensus 445 kGYgkd~a~vak~AI~~a~~~gfDVvLiDTAG-------------R~~~------------~~~lm~~l~k~~~~~~pd~ 499 (587)
T KOG0781|consen 445 KGYGKDAAGVAKEAIQEARNQGFDVVLIDTAG-------------RMHN------------NAPLMTSLAKLIKVNKPDL 499 (587)
T ss_pred hhcCCChHHHHHHHHHHHHhcCCCEEEEeccc-------------cccC------------ChhHHHHHHHHHhcCCCce
Confidence 45555532333444566667799999999988 2111 1222555666777667778
Q ss_pred EEEEEeChhHHHHHHHHHh---------CCcccceeeEe
Q psy4974 180 VSLFGWCDGGHLSFVFSMK---------YPHMVHKLVIW 209 (345)
Q Consensus 180 i~lvGhS~Gg~ia~~~a~~---------~p~~v~~lvl~ 209 (345)
|..+|--+=|.-++.-+.. .|..++++++.
T Consensus 500 i~~vgealvg~dsv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 500 ILFVGEALVGNDSVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred EEEehhhhhCcHHHHHHHHHHHHHhcCCCccccceEEEE
Confidence 8889888777666554433 24456666654
No 258
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=54.18 E-value=22 Score=28.23 Aligned_cols=33 Identities=12% Similarity=0.052 Sum_probs=25.5
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHhCC
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP 200 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p 200 (345)
+.+.+...++..-.+.|-|.|+.+|..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 344455557777789999999999999998654
No 259
>PRK10279 hypothetical protein; Provisional
Probab=54.10 E-value=18 Score=31.85 Aligned_cols=33 Identities=15% Similarity=0.144 Sum_probs=26.7
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHhCC
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP 200 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p 200 (345)
+.+.++..++..-.++|-|+|+.++..+|....
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 445566678888889999999999999997653
No 260
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=53.65 E-value=20 Score=31.66 Aligned_cols=32 Identities=13% Similarity=0.112 Sum_probs=26.1
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHhC
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
+.+.++..++..-.++|-|+|+.++..+|...
T Consensus 33 vL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 45566666887778999999999999999864
No 261
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=52.32 E-value=94 Score=25.11 Aligned_cols=36 Identities=11% Similarity=0.147 Sum_probs=28.5
Q ss_pred ceEEEEcCcCCCchhhH-HHHHHhhCCCCeEEEEeCC
Q psy4974 94 QVLFFTYGVLGEIRNSF-KKQLTAFDPKLFTSIFWDP 129 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~-~~~~~~L~~~G~~vi~~D~ 129 (345)
+.+|++-|+.|++.... ..+.+.|.+.|++++.+|-
T Consensus 23 ~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 23 GAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 58999999999864444 3456788889999999993
No 262
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=51.96 E-value=24 Score=28.56 Aligned_cols=32 Identities=22% Similarity=0.338 Sum_probs=24.3
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHhC
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
+.+.++..++..-.++|-|.||.+|..++...
T Consensus 17 vl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 17 ALKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 33444555666778999999999999998754
No 263
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=49.96 E-value=29 Score=28.98 Aligned_cols=31 Identities=16% Similarity=0.189 Sum_probs=23.9
Q ss_pred HHHHHHhCCccEEEEEeChhHHHHHHHHHhC
Q psy4974 169 YELLKLLGVCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 169 ~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
.+.+...+++.-.++|-|.|+.+|..+|...
T Consensus 19 L~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 19 LAALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 3444445777778999999999999999754
No 264
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=49.93 E-value=27 Score=30.23 Aligned_cols=52 Identities=17% Similarity=0.019 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhCCc---cEEEEEeChhHHHHHHHHHh---CCcccceeeEeccCCCC
Q psy4974 164 DVDIAYELLKLLGVC---KVSLFGWCDGGHLSFVFSMK---YPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 164 ~~~~~~~~l~~~~~~---~i~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~~~ 215 (345)
+.+.+.+.+..+..+ ++++.|-|+|++-+...-.. .-+++.+.++.+|+...
T Consensus 92 L~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 92 LFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred HHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 344444445555432 79999999998766553322 23568999999887653
No 265
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=49.57 E-value=69 Score=27.64 Aligned_cols=39 Identities=8% Similarity=0.215 Sum_probs=32.1
Q ss_pred CceEEEEcCcCCCch-hhHHHHHHhhCCCCeEEEEeCCCC
Q psy4974 93 AQVLFFTYGVLGEIR-NSFKKQLTAFDPKLFTSIFWDPPG 131 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G 131 (345)
.|+||++.|+-+++. ..-..+...|..+|++|.++..|.
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt 94 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPS 94 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC
Confidence 379999999988743 455778899999999999997766
No 266
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=49.18 E-value=1e+02 Score=25.99 Aligned_cols=39 Identities=15% Similarity=0.196 Sum_probs=32.2
Q ss_pred CceEEEEcCcCCCch-hhHHHHHHhhCCCCeEEEEeCCCC
Q psy4974 93 AQVLFFTYGVLGEIR-NSFKKQLTAFDPKLFTSIFWDPPG 131 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G 131 (345)
.|+||++.|+-+++. ..-..+...|..+|+.|.++..|.
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt 69 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPS 69 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC
Confidence 479999999988743 455778899999999999998776
No 267
>PRK02399 hypothetical protein; Provisional
Probab=47.28 E-value=1.7e+02 Score=26.91 Aligned_cols=99 Identities=17% Similarity=0.141 Sum_probs=60.5
Q ss_pred EEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC------------C----CCC---C
Q psy4974 97 FFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG------------R----SFV---P 157 (345)
Q Consensus 97 v~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~------------~----~~~---~ 157 (345)
|++-|..+.....+..+.+.+.+.|..|+.+|.-. .|....+. . ... .
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~-------------~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dR 72 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSG-------------LGEPPFEPDISAEEVAEAAGDGIEAVFCGGDR 72 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCC-------------CCCCCCCCCCCHHHHHHHcCCCHHHhhcCccH
Confidence 55557777755777777777878899999999843 22110000 0 000 0
Q ss_pred ccchHHHHHHHHHHHHHh----CCccEEEEEeChhHHHHHHHHHhCCcccceeeE
Q psy4974 158 FQYIEEDVDIAYELLKLL----GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVI 208 (345)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~----~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 208 (345)
-..++.+.+.+..++..+ .++-++-+|-|.|..++.......|--+-+++.
T Consensus 73 g~ai~~M~~ga~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 73 GSAMAAMAEGAAAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 011233444455555432 355688899999999999988888765555554
No 268
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=46.46 E-value=29 Score=30.64 Aligned_cols=32 Identities=13% Similarity=0.177 Sum_probs=27.1
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHhC
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
+.+.++..++..-.+.|-|+|+.++..+|...
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 45666777888899999999999999999864
No 269
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=45.79 E-value=35 Score=27.13 Aligned_cols=31 Identities=13% Similarity=0.062 Sum_probs=23.8
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHhCC
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP 200 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p 200 (345)
+.++..++..-.+.|-|.|+.+|..++...+
T Consensus 20 ~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 20 RALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 3444556666679999999999999987654
No 270
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=45.73 E-value=30 Score=29.89 Aligned_cols=32 Identities=13% Similarity=0.104 Sum_probs=25.6
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHhC
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
+.+.+++.++..=.+.|-|+|+.++..+|...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 44555667877667999999999999999764
No 271
>PF00837 T4_deiodinase: Iodothyronine deiodinase; InterPro: IPR000643 Iodothyronine deiodinase (1.97.1.10 from EC) (DI) [] is the vertebrate enzyme responsible for the deiodination of the prohormone thyroxine (T4 or 3,5,3',5'-tetraiodothyronine) into the biologically active hormone T3 (3,5,3'-triiodothyronine) and of T3 into the inactive metabolite T2 (3,3'-diiodothyronine). All known DI are proteins of about 250 residues that contain a selenocysteine at their active site. Three types of DI are known, type II is essential for providing the brain with the appropriate levels of T3 during the critical period of development, and type III is essential for the regulation of thyroid hormone inactivation during embryological development.; GO: 0004800 thyroxine 5'-deiodinase activity, 0055114 oxidation-reduction process
Probab=45.46 E-value=1.9e+02 Score=24.49 Aligned_cols=129 Identities=14% Similarity=0.222 Sum_probs=75.5
Q ss_pred CcceeeeEEEcCce-EEEEEcCCCCceEEEEcCcCCCc-----hhhHHHHHHhhCCC-CeEEEEeC--CCCchhhhccCC
Q psy4974 70 DVFTEGFFSIKGCD-IRFIKYGSGAQVLFFTYGVLGEI-----RNSFKKQLTAFDPK-LFTSIFWD--PPGNVVLYLLGK 140 (345)
Q Consensus 70 ~~~~~~~~~~~g~~-l~~~~~g~~~p~vv~lHG~~~~~-----~~~~~~~~~~L~~~-G~~vi~~D--~~G~~~~~~~g~ 140 (345)
..+....++.+|.+ .+......+..|+|+--|....+ ...+..+++.+++. .|-++.+. +|+
T Consensus 78 ~APns~vv~l~g~~~~~ildf~~g~RPLVlnFGS~TCPpF~~~l~~f~~l~~~f~d~adFl~VYI~EAHps--------- 148 (237)
T PF00837_consen 78 PAPNSPVVTLDGQRSCRILDFAKGNRPLVLNFGSCTCPPFMAKLDAFKRLVEDFSDVADFLIVYIEEAHPS--------- 148 (237)
T ss_pred CCCCCceEeeCCCcceeHHHhccCCCCeEEEcccccchHHHHHHHHHHHHHHHhhhhhheehhhHhhhCcC---------
Confidence 34557788888887 77777766666788887876552 24455666666653 24444444 333
Q ss_pred ccCCCCCCCCCC-CCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCccc-----ceeeEeccCCC
Q psy4974 141 TCSGYGQSLPKG-RSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMV-----HKLVIWGTKSF 214 (345)
Q Consensus 141 ~~~~~G~s~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v-----~~lvl~~~~~~ 214 (345)
-|...... ..+....++++-......+.+.. ..+-++--+|.+.....|++ .|+++ .+++..++..+
T Consensus 149 ----DgW~~~~~~~~i~qh~sledR~~aA~~l~~~~--~~~pi~vD~mdN~~~~~YgA-~PeRlyIi~~gkv~Y~Gg~GP 221 (237)
T PF00837_consen 149 ----DGWAFGNNPYEIPQHRSLEDRLRAAKLLKEEF--PQCPIVVDTMDNNFNKAYGA-LPERLYIIQDGKVVYKGGPGP 221 (237)
T ss_pred ----CCccCCCCceeecCCCCHHHHHHHHHHHHhhC--CCCCEEEEccCCHHHHHhCC-CcceEEEEECCEEEEeCCCCC
Confidence 33222111 11102336777777777776665 34557778888888877775 57653 34455554433
No 272
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=45.45 E-value=25 Score=33.80 Aligned_cols=31 Identities=13% Similarity=0.145 Sum_probs=25.5
Q ss_pred HHHH-HHhCCccEEEEEeChhHHHHHHHHHhC
Q psy4974 169 YELL-KLLGVCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 169 ~~~l-~~~~~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
.+++ +..|+++-.++|||+|=+.|+..|.-.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3555 578899999999999999998888654
No 273
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=45.16 E-value=20 Score=30.07 Aligned_cols=39 Identities=18% Similarity=0.265 Sum_probs=28.6
Q ss_pred CceEEEEcCcCCCch-hhHHHHHHhhCCCCeEEEEeCCCC
Q psy4974 93 AQVLFFTYGVLGEIR-NSFKKQLTAFDPKLFTSIFWDPPG 131 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G 131 (345)
.|+||++.|+.+++. ..-..+...|..+|++|.++..|.
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~pt 69 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKPT 69 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS--
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCCC
Confidence 468999999988853 445667788999999999998776
No 274
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=44.52 E-value=21 Score=29.85 Aligned_cols=34 Identities=12% Similarity=0.147 Sum_probs=27.1
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeC
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWD 128 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D 128 (345)
.||++|............+++.|.++||+++.++
T Consensus 188 ~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 188 AILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 6999998543324678889999999999998875
No 275
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=44.29 E-value=35 Score=28.29 Aligned_cols=33 Identities=15% Similarity=0.049 Sum_probs=25.4
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHhCC
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP 200 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p 200 (345)
+.+.+...++..-.+.|.|.|+.+|..+|...+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 334455557666679999999999999998764
No 276
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=44.17 E-value=35 Score=29.64 Aligned_cols=37 Identities=11% Similarity=-0.042 Sum_probs=24.2
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCCe-------EEEEeCCCC
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKLF-------TSIFWDPPG 131 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G~-------~vi~~D~~G 131 (345)
.-|++.|.|...-..-+.+...+...|. +++.+|..|
T Consensus 26 ~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~G 69 (279)
T cd05312 26 QRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKG 69 (279)
T ss_pred cEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCC
Confidence 3456667766543445555566555566 899999988
No 277
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=43.58 E-value=19 Score=33.49 Aligned_cols=37 Identities=8% Similarity=0.044 Sum_probs=27.2
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccc
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVH 204 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~ 204 (345)
+...+...++.+=++.|-|.|+.+|..++...++.+.
T Consensus 91 VLkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel~ 127 (421)
T cd07230 91 VLKALFEANLLPRIISGSSAGSIVAAILCTHTDEEIP 127 (421)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHH
Confidence 3344444466677899999999999999987665543
No 278
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=43.30 E-value=42 Score=27.96 Aligned_cols=92 Identities=17% Similarity=0.145 Sum_probs=49.6
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCcc-chHHHHHHHHHHHH
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQ-YIEEDVDIAYELLK 173 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~-~~~~~~~~~~~~l~ 173 (345)
.++-.|=+.-. +..++.|.+.+..|+..|+-| +.+.-.+-| ... +.+++.+ ...+++
T Consensus 89 l~inaHvGfvd-----E~~~eklk~~~vdvvsLDfvg---------------Dn~vIk~vy-~l~ksv~dyl~-~l~~L~ 146 (275)
T COG1856 89 LLINAHVGFVD-----ESDLEKLKEELVDVVSLDFVG---------------DNDVIKRVY-KLPKSVEDYLR-SLLLLK 146 (275)
T ss_pred eEEEEEeeecc-----HHHHHHHHHhcCcEEEEeecC---------------ChHHHHHHH-cCCccHHHHHH-HHHHHH
Confidence 45555543222 335566777778999999977 221111111 110 1112222 223445
Q ss_pred HhCCc--cEEEEEeChhHH----HHHHHHHhCCcccceeeEec
Q psy4974 174 LLGVC--KVSLFGWCDGGH----LSFVFSMKYPHMVHKLVIWG 210 (345)
Q Consensus 174 ~~~~~--~i~lvGhS~Gg~----ia~~~a~~~p~~v~~lvl~~ 210 (345)
..+++ +-+.+|-+.|+. -|+.+...++ .+++|+..
T Consensus 147 e~~irvvpHitiGL~~gki~~e~kaIdiL~~~~--~DalVl~v 187 (275)
T COG1856 147 ENGIRVVPHITIGLDFGKIHGEFKAIDILVNYE--PDALVLVV 187 (275)
T ss_pred HcCceeceeEEEEeccCcccchHHHHHHHhcCC--CCeEEEEE
Confidence 55554 667899999985 4777777665 45555544
No 279
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=42.82 E-value=31 Score=27.02 Aligned_cols=36 Identities=8% Similarity=0.137 Sum_probs=26.2
Q ss_pred ceEEEEcCcCCCchhhH-HHHHHhhCCCCeEEEEeCC
Q psy4974 94 QVLFFTYGVLGEIRNSF-KKQLTAFDPKLFTSIFWDP 129 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~-~~~~~~L~~~G~~vi~~D~ 129 (345)
+.+|++-|..++..... ..+.+.|.+.|+.++.+|-
T Consensus 2 g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 2 GFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp -EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 57999999999964443 3455777788999999983
No 280
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=42.77 E-value=2.1e+02 Score=25.53 Aligned_cols=22 Identities=18% Similarity=0.245 Sum_probs=19.0
Q ss_pred CccEEEEEeChhHHHHHHHHHh
Q psy4974 177 VCKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 177 ~~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
-++|+++|+|-|+++|--+|.-
T Consensus 121 GD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 121 GDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred CCeEEEeeccchhHHHHHHHHH
Confidence 3689999999999999888864
No 281
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=42.14 E-value=1.7e+02 Score=27.32 Aligned_cols=76 Identities=13% Similarity=0.049 Sum_probs=55.0
Q ss_pred hHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChh
Q psy4974 109 SFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDG 188 (345)
Q Consensus 109 ~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~G 188 (345)
.-..-++.+.+.+|.|+.+|-.| . . . .=+++.+.+.++-+.+..+.+.+|--++=
T Consensus 170 Iak~al~~ak~~~~DvvIvDTAG-------------R-------l---~--ide~Lm~El~~Ik~~~~P~E~llVvDam~ 224 (451)
T COG0541 170 IAKAALEKAKEEGYDVVIVDTAG-------------R-------L---H--IDEELMDELKEIKEVINPDETLLVVDAMI 224 (451)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCC-------------c-------c---c--ccHHHHHHHHHHHhhcCCCeEEEEEeccc
Confidence 34445566777778999999877 1 1 1 12455677777778888888999999999
Q ss_pred HHHHHHHHHhCCcc--cceeeEe
Q psy4974 189 GHLSFVFSMKYPHM--VHKLVIW 209 (345)
Q Consensus 189 g~ia~~~a~~~p~~--v~~lvl~ 209 (345)
|.-|...|..+.+. +.++|+.
T Consensus 225 GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 225 GQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred chHHHHHHHHHhhhcCCceEEEE
Confidence 99888888876543 6777775
No 282
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=42.06 E-value=48 Score=26.30 Aligned_cols=31 Identities=16% Similarity=0.235 Sum_probs=23.3
Q ss_pred HHHHHHhCCccEEEEEeChhHHHHHHHHHhC
Q psy4974 169 YELLKLLGVCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 169 ~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
.+.++..+...-.++|-|.|+.+|..++...
T Consensus 19 l~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 19 LKALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 3444455666667999999999999998654
No 283
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=41.03 E-value=2.5e+02 Score=24.73 Aligned_cols=123 Identities=19% Similarity=0.250 Sum_probs=60.7
Q ss_pred EEcCceEEEEEcCC-------CC-ceEEEEcCcCCCchhhHHHHHHhhCCC--CeEEEEeCCCCchhhhcc--CCccCCC
Q psy4974 78 SIKGCDIRFIKYGS-------GA-QVLFFTYGVLGEIRNSFKKQLTAFDPK--LFTSIFWDPPGNVVLYLL--GKTCSGY 145 (345)
Q Consensus 78 ~~~g~~l~~~~~g~-------~~-p~vv~lHG~~~~~~~~~~~~~~~L~~~--G~~vi~~D~~G~~~~~~~--g~~~~~~ 145 (345)
...+...||...++ ++ ..+|.--|.+|+ ...+.++|.++ ..++++.|..+|..+.-. .+--.|.
T Consensus 147 NpaN~~aH~~tT~~EI~~~~~g~~d~fVagvGTGGT----itGvar~Lk~~~p~i~iv~vdP~~S~~~~~G~g~~~i~GI 222 (300)
T COG0031 147 NPANPEAHYETTGPEIWQQTDGKVDAFVAGVGTGGT----ITGVARYLKERNPNVRIVAVDPEGSVLLSGGEGPHKIEGI 222 (300)
T ss_pred CCccHHHHHhhhHHHHHHHhCCCCCEEEEeCCcchh----HHHHHHHHHhhCCCcEEEEECCCCCcccCCCCCCcccCCC
Confidence 33455566654431 22 134444444444 34455555543 389999999884444321 1222333
Q ss_pred CCCCCCCCCCCCccch--------HHHHHHHHHHHHHhCCccEEEEEeChhHHH--HHHHHHhCCcccceeeEecc
Q psy4974 146 GQSLPKGRSFVPFQYI--------EEDVDIAYELLKLLGVCKVSLFGWCDGGHL--SFVFSMKYPHMVHKLVIWGT 211 (345)
Q Consensus 146 G~s~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~i--a~~~a~~~p~~v~~lvl~~~ 211 (345)
|.+-.+ ..+ ..+-+ ++....+..+.+..+ .++|-|-|+.+ |+.+|.+.+. =+.+|.+-|
T Consensus 223 G~~~ip-~~~-~~~~iD~v~~V~d~~A~~~~r~La~~eG----ilvG~SsGA~~~aa~~~a~~~~~-g~~IVti~p 291 (300)
T COG0031 223 GAGFVP-ENL-DLDLIDEVIRVSDEEAIATARRLAREEG----LLVGISSGAALAAALKLAKELPA-GKTIVTILP 291 (300)
T ss_pred CCCcCC-ccc-ccccCceEEEECHHHHHHHHHHHHHHhC----eeecccHHHHHHHHHHHHHhcCC-CCeEEEEEC
Confidence 444333 111 11111 222333445555555 89999999976 4446666542 233444433
No 284
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=40.28 E-value=24 Score=32.28 Aligned_cols=40 Identities=13% Similarity=0.181 Sum_probs=29.7
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceee
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLV 207 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lv 207 (345)
+...+...++.+=++.|-|.|+.+|..+|...++.+..++
T Consensus 101 v~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 101 VVKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 3444555677777899999999999999986655554443
No 285
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=39.79 E-value=1.6e+02 Score=24.04 Aligned_cols=77 Identities=18% Similarity=0.182 Sum_probs=46.7
Q ss_pred hhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeCh
Q psy4974 108 NSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCD 187 (345)
Q Consensus 108 ~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~ 187 (345)
.......+.+.++++.++.+|-+| ... .-.+..+.+..+++......++++=-+.
T Consensus 70 ~~~~~~l~~~~~~~~D~vlIDT~G-------------r~~------------~d~~~~~el~~~~~~~~~~~~~LVlsa~ 124 (196)
T PF00448_consen 70 EIAREALEKFRKKGYDLVLIDTAG-------------RSP------------RDEELLEELKKLLEALNPDEVHLVLSAT 124 (196)
T ss_dssp HHHHHHHHHHHHTTSSEEEEEE-S-------------SSS------------THHHHHHHHHHHHHHHSSSEEEEEEEGG
T ss_pred HHHHHHHHHHhhcCCCEEEEecCC-------------cch------------hhHHHHHHHHHHhhhcCCccceEEEecc
Confidence 344445566666679999999999 321 1234466777777777666777666555
Q ss_pred hHHHHHHHHHhCC--cccceeeEe
Q psy4974 188 GGHLSFVFSMKYP--HMVHKLVIW 209 (345)
Q Consensus 188 Gg~ia~~~a~~~p--~~v~~lvl~ 209 (345)
.+.-.+..+..+- -.+.++|+.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~lIlT 148 (196)
T PF00448_consen 125 MGQEDLEQALAFYEAFGIDGLILT 148 (196)
T ss_dssp GGGHHHHHHHHHHHHSSTCEEEEE
T ss_pred cChHHHHHHHHHhhcccCceEEEE
Confidence 5555554443331 236777765
No 286
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=39.25 E-value=52 Score=26.87 Aligned_cols=40 Identities=10% Similarity=-0.076 Sum_probs=25.6
Q ss_pred CCceEEEEcCcCCCc--hhhHHHHHHhhCCCCeEEEEeCCCC
Q psy4974 92 GAQVLFFTYGVLGEI--RNSFKKQLTAFDPKLFTSIFWDPPG 131 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~--~~~~~~~~~~L~~~G~~vi~~D~~G 131 (345)
.++|++++||..+.. ...-..+...|.+.|..+...-+|+
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~ 184 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPG 184 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCc
Confidence 347999999987651 1333456667777776555555555
No 287
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=38.05 E-value=38 Score=31.87 Aligned_cols=58 Identities=12% Similarity=-0.014 Sum_probs=37.7
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHhhcC------Cc-EEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 283 VPVLVFHSADDVMVSTQQVQSLLNQLK------FC-QYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 283 ~Pvl~i~G~~D~~v~~~~~~~~~~~~~------~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
.+++..+|-.|..+|+.......+..+ +. ...++ .+||++..++|+...+.+..|+.-
T Consensus 426 Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y-~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 426 LKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIY-EAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred ceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEe-cCcceeecCChHHHHHHHHHHHhh
Confidence 455666666666665443333222222 22 34455 599999999999999999999864
No 288
>PRK14974 cell division protein FtsY; Provisional
Probab=37.91 E-value=2e+02 Score=25.82 Aligned_cols=69 Identities=9% Similarity=0.056 Sum_probs=41.6
Q ss_pred hhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHH
Q psy4974 116 AFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVF 195 (345)
Q Consensus 116 ~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~ 195 (345)
.....|+.++.+|-+| .... -....+.+..+.+....+.++++.-+.-|.-+..-
T Consensus 217 ~~~~~~~DvVLIDTaG-------------r~~~------------~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~ 271 (336)
T PRK14974 217 HAKARGIDVVLIDTAG-------------RMHT------------DANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQ 271 (336)
T ss_pred HHHhCCCCEEEEECCC-------------ccCC------------cHHHHHHHHHHHHhhCCceEEEeeccccchhHHHH
Confidence 3334568999999888 3221 12334555566665666667777777767666665
Q ss_pred HHhCC--cccceeeEe
Q psy4974 196 SMKYP--HMVHKLVIW 209 (345)
Q Consensus 196 a~~~p--~~v~~lvl~ 209 (345)
+..+. -.+.++|+.
T Consensus 272 a~~f~~~~~~~giIlT 287 (336)
T PRK14974 272 AREFNEAVGIDGVILT 287 (336)
T ss_pred HHHHHhcCCCCEEEEe
Confidence 55432 246777765
No 289
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=37.87 E-value=24 Score=28.55 Aligned_cols=34 Identities=3% Similarity=0.012 Sum_probs=24.9
Q ss_pred eEEEEcCcCC--CchhhHHHHHHhhCCCCeEEEEeC
Q psy4974 95 VLFFTYGVLG--EIRNSFKKQLTAFDPKLFTSIFWD 128 (345)
Q Consensus 95 ~vv~lHG~~~--~~~~~~~~~~~~L~~~G~~vi~~D 128 (345)
.||++|.... ........+++.|.++||+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 5999994222 123567788899999999998874
No 290
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=37.59 E-value=3e+02 Score=24.71 Aligned_cols=98 Identities=13% Similarity=0.096 Sum_probs=0.0
Q ss_pred CCCceEEEEcCcCCC--chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 91 SGAQVLFFTYGVLGE--IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~--~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
+++|.|+++-|..|. . .+-..++.+|.++|+.|+.. -|++ .-...++.+
T Consensus 136 ~~~p~Vil~vGVNG~GKT-TTIaKLA~~l~~~g~~Vlla-----------------A~DT-----------FRAaAiEQL 186 (340)
T COG0552 136 EKKPFVILFVGVNGVGKT-TTIAKLAKYLKQQGKSVLLA-----------------AGDT-----------FRAAAIEQL 186 (340)
T ss_pred CCCcEEEEEEecCCCchH-hHHHHHHHHHHHCCCeEEEE-----------------ecch-----------HHHHHHHHH
Q ss_pred HHHHHHhCCccEEEEEeChh---HHHHHHHHHhCCcccceeeEeccCCCCCchhH
Q psy4974 169 YELLKLLGVCKVSLFGWCDG---GHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV 220 (345)
Q Consensus 169 ~~~l~~~~~~~i~lvGhS~G---g~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 220 (345)
..+-+.++ +-++.|..| +.++.........+=.-+++++++........
T Consensus 187 ~~w~er~g---v~vI~~~~G~DpAaVafDAi~~Akar~~DvvliDTAGRLhnk~n 238 (340)
T COG0552 187 EVWGERLG---VPVISGKEGADPAAVAFDAIQAAKARGIDVVLIDTAGRLHNKKN 238 (340)
T ss_pred HHHHHHhC---CeEEccCCCCCcHHHHHHHHHHHHHcCCCEEEEeCcccccCchh
No 291
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=37.56 E-value=27 Score=30.91 Aligned_cols=34 Identities=9% Similarity=0.029 Sum_probs=25.0
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHhCCccc
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMV 203 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v 203 (345)
+.+...++.+-++.|-|.|+.+|..++...++.+
T Consensus 88 kaL~e~gl~p~~i~GsSaGAivaa~~~~~t~~El 121 (323)
T cd07231 88 RTLVEHQLLPRVIAGSSVGSIVCAIIATRTDEEL 121 (323)
T ss_pred HHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 3344447777789999999999999987654433
No 292
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=37.25 E-value=27 Score=32.32 Aligned_cols=38 Identities=11% Similarity=0.098 Sum_probs=27.9
Q ss_pred HHHHHHhCCccEEEEEeChhHHHHHHHHHhCCccccee
Q psy4974 169 YELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKL 206 (345)
Q Consensus 169 ~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~l 206 (345)
...+...++.+=++.|-|.|+.+|..+|...++.+..+
T Consensus 86 lkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 86 VKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 33334446667789999999999999998766655444
No 293
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=36.66 E-value=29 Score=29.99 Aligned_cols=33 Identities=6% Similarity=0.040 Sum_probs=27.6
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeC
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWD 128 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D 128 (345)
.||++|....+ ......+++.|.++||.++.++
T Consensus 232 ~IILmHd~~~T-~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTASS-TEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred cEEEEcCCccH-HHHHHHHHHHHHHCCCEEEeHH
Confidence 68999987666 3778889999999999998874
No 294
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=36.41 E-value=1.3e+02 Score=23.50 Aligned_cols=57 Identities=23% Similarity=0.047 Sum_probs=34.8
Q ss_pred HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHH
Q psy4974 112 KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHL 191 (345)
Q Consensus 112 ~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~i 191 (345)
.+...+.+ |-.|++.|.+| -- -+-+++++.+..+-. .|-+=.+++|-|.|=.-
T Consensus 59 ~il~~i~~-~~~vi~Ld~~G-------------k~------------~sSe~fA~~l~~~~~-~G~~i~f~IGG~~Gl~~ 111 (155)
T COG1576 59 AILAAIPK-GSYVVLLDIRG-------------KA------------LSSEEFADFLERLRD-DGRDISFLIGGADGLSE 111 (155)
T ss_pred HHHHhcCC-CCeEEEEecCC-------------Cc------------CChHHHHHHHHHHHh-cCCeEEEEEeCcccCCH
Confidence 34556655 48999999999 21 133455665555433 34234568999998655
Q ss_pred HHHH
Q psy4974 192 SFVF 195 (345)
Q Consensus 192 a~~~ 195 (345)
++.-
T Consensus 112 ~~~~ 115 (155)
T COG1576 112 AVKA 115 (155)
T ss_pred HHHH
Confidence 5544
No 295
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=35.38 E-value=30 Score=33.38 Aligned_cols=36 Identities=14% Similarity=0.149 Sum_probs=27.9
Q ss_pred EEEEEeChhHHHHHHHHHhCC-cccceeeEeccCCCC
Q psy4974 180 VSLFGWCDGGHLSFVFSMKYP-HMVHKLVIWGTKSFL 215 (345)
Q Consensus 180 i~lvGhS~Gg~ia~~~a~~~p-~~v~~lvl~~~~~~~ 215 (345)
++.-+.|-||.-++..|.+.. ..|++++...|....
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~ 323 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNL 323 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccCC
Confidence 455678999999999998764 468999988875543
No 296
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=35.03 E-value=55 Score=24.62 Aligned_cols=31 Identities=10% Similarity=0.023 Sum_probs=20.6
Q ss_pred CCCCceEEEEcCcCCCchhhH--HHHHHhhCCCC
Q psy4974 90 GSGAQVLFFTYGVLGEIRNSF--KKQLTAFDPKL 121 (345)
Q Consensus 90 g~~~p~vv~lHG~~~~~~~~~--~~~~~~L~~~G 121 (345)
.+.+|.|+-+||+.|.+ ..| +-+++.|-..|
T Consensus 49 ~p~KpLVlSfHG~tGtG-Kn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTG-KNFVSRLIAEHLYKSG 81 (127)
T ss_pred CCCCCEEEEeecCCCCc-HHHHHHHHHHHHHhcc
Confidence 45668899999999996 444 23445554444
No 297
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=34.65 E-value=2.4e+02 Score=25.94 Aligned_cols=88 Identities=15% Similarity=0.094 Sum_probs=47.6
Q ss_pred eEEEEcCcCCCc--hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 95 VLFFTYGVLGEI--RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 95 ~vv~lHG~~~~~--~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
++|+++-..... ......-+..|.+.|+.|+-+.. | .|- |...|.. .+...++.++.+.+.+
T Consensus 114 plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~-g---~~a----c~~~g~g--------~~~~~~~i~~~v~~~~ 177 (390)
T TIGR00521 114 PIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDS-G---LLA----CGDEGKG--------RLAEPETIVKAAEREF 177 (390)
T ss_pred CEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCC-c---ccc----cccccCC--------CCCCHHHHHHHHHHHH
Confidence 677776543221 13445666778888888776653 3 000 1111222 2235566677777665
Q ss_pred HH---hCCccEEEEEe------------------ChhHHHHHHHHHh
Q psy4974 173 KL---LGVCKVSLFGW------------------CDGGHLSFVFSMK 198 (345)
Q Consensus 173 ~~---~~~~~i~lvGh------------------S~Gg~ia~~~a~~ 198 (345)
.. +.-+++.+.|- .+|..+|..++.+
T Consensus 178 ~~~~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~ 224 (390)
T TIGR00521 178 SPKEDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKR 224 (390)
T ss_pred hhccccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHC
Confidence 43 43356666666 3566777766654
No 298
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=34.58 E-value=1.2e+02 Score=26.63 Aligned_cols=17 Identities=24% Similarity=0.554 Sum_probs=15.2
Q ss_pred EEEEeChhHHHHHHHHH
Q psy4974 181 SLFGWCDGGHLSFVFSM 197 (345)
Q Consensus 181 ~lvGhS~Gg~ia~~~a~ 197 (345)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 38999999999999886
No 299
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=34.43 E-value=1.1e+02 Score=30.14 Aligned_cols=38 Identities=13% Similarity=0.014 Sum_probs=27.7
Q ss_pred ceEEEEcCcCCCc--hhhHHHHHHhhCCCCeEEEEeCCCC
Q psy4974 94 QVLFFTYGVLGEI--RNSFKKQLTAFDPKLFTSIFWDPPG 131 (345)
Q Consensus 94 p~vv~lHG~~~~~--~~~~~~~~~~L~~~G~~vi~~D~~G 131 (345)
.|+++|||..... ...-..+...|..+|..|-..-+|+
T Consensus 552 ~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~ 591 (620)
T COG1506 552 TPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPD 591 (620)
T ss_pred CCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCC
Confidence 5899999987751 2344557788888887777777766
No 300
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=33.83 E-value=97 Score=24.26 Aligned_cols=71 Identities=17% Similarity=0.055 Sum_probs=35.4
Q ss_pred HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHH
Q psy4974 112 KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHL 191 (345)
Q Consensus 112 ~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~i 191 (345)
.+...+.+. -.++++|..| - .-+-+++++.+..+...-..+=++++|-+.|=.-
T Consensus 59 ~il~~i~~~-~~~i~Ld~~G-------------k------------~~sS~~fA~~l~~~~~~g~~~i~F~IGG~~G~~~ 112 (155)
T PF02590_consen 59 RILKKIPPN-DYVILLDERG-------------K------------QLSSEEFAKKLERWMNQGKSDIVFIIGGADGLSE 112 (155)
T ss_dssp HHHCTSHTT-SEEEEE-TTS-------------E------------E--HHHHHHHHHHHHHTTS-EEEEEE-BTTB--H
T ss_pred HHHhhccCC-CEEEEEcCCC-------------c------------cCChHHHHHHHHHHHhcCCceEEEEEecCCCCCH
Confidence 344455444 6789999998 2 1144566777776655422244679999998433
Q ss_pred HHHHHHhCCcccceeeEeccCCC
Q psy4974 192 SFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 192 a~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.+. . +.+..+.+++...
T Consensus 113 ~~~--~----~a~~~lSLS~mTf 129 (155)
T PF02590_consen 113 EVR--K----RADEKLSLSKMTF 129 (155)
T ss_dssp HHH--H----H-SEEEES-SS--
T ss_pred HHH--h----hcCceEEEecCCC
Confidence 222 1 2334555555444
No 301
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=33.03 E-value=1.4e+02 Score=26.64 Aligned_cols=48 Identities=13% Similarity=0.070 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhCCccEEEEEeChh--HHHHHHHHHhCCcccceeeEeccC
Q psy4974 165 VDIAYELLKLLGVCKVSLFGWCDG--GHLSFVFSMKYPHMVHKLVIWGTK 212 (345)
Q Consensus 165 ~~~~~~~l~~~~~~~i~lvGhS~G--g~ia~~~a~~~p~~v~~lvl~~~~ 212 (345)
...+..++..+...+++|+|-|-= =-+=..++.++|.+|.++.+-+..
T Consensus 265 ~~~l~nil~~~p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 265 GQSLRNILRRYPDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred ccHHHHHHHhCCCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeeecc
Confidence 344566788888889999998843 234445777899999998877655
No 302
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=32.85 E-value=68 Score=27.51 Aligned_cols=34 Identities=9% Similarity=0.001 Sum_probs=24.2
Q ss_pred HHHHHHHhCCc-cEEEEEeChhHHHHHHHHHhCCc
Q psy4974 168 AYELLKLLGVC-KVSLFGWCDGGHLSFVFSMKYPH 201 (345)
Q Consensus 168 ~~~~l~~~~~~-~i~lvGhS~Gg~ia~~~a~~~p~ 201 (345)
+.+.+...++. .=.++|.|.|+.+|..++...+.
T Consensus 16 vl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 16 VLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 33344444555 44799999999999999887543
No 303
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=32.65 E-value=53 Score=29.09 Aligned_cols=22 Identities=18% Similarity=0.037 Sum_probs=19.0
Q ss_pred CCccEEEEEeChhHHHHHHHHH
Q psy4974 176 GVCKVSLFGWCDGGHLSFVFSM 197 (345)
Q Consensus 176 ~~~~i~lvGhS~Gg~ia~~~a~ 197 (345)
+.++.++.|||+|=+.|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4678899999999999988775
No 304
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=31.32 E-value=92 Score=27.62 Aligned_cols=19 Identities=21% Similarity=0.247 Sum_probs=16.6
Q ss_pred EEEEeChhHHHHHHHHHhC
Q psy4974 181 SLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 181 ~lvGhS~Gg~ia~~~a~~~ 199 (345)
.+.|.|+||.+|..++...
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 4899999999999999754
No 305
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=31.20 E-value=97 Score=27.97 Aligned_cols=33 Identities=12% Similarity=-0.073 Sum_probs=24.1
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCC
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPG 131 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G 131 (345)
.++|.+.|+-+|+- .+..|.++||.|+.+-+..
T Consensus 5 kV~v~mSGGVDSSV-----aA~lLk~QGyeViGl~m~~ 37 (356)
T COG0482 5 KVLVGMSGGVDSSV-----AAYLLKEQGYEVIGLFMKN 37 (356)
T ss_pred EEEEEccCCHHHHH-----HHHHHHHcCCeEEEEEEEe
Confidence 47888888766641 2234667899999999887
No 306
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=31.12 E-value=1.7e+02 Score=27.38 Aligned_cols=71 Identities=11% Similarity=0.080 Sum_probs=41.1
Q ss_pred HHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHH
Q psy4974 114 LTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSF 193 (345)
Q Consensus 114 ~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~ 193 (345)
++.+...+|.++.+|-+| .-. .-+.+.+.+..+.+....+.++++--++-|.-+.
T Consensus 175 l~~~~~~~~DvViIDTaG-------------r~~------------~d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~ 229 (429)
T TIGR01425 175 VEKFKKENFDIIIVDTSG-------------RHK------------QEDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAE 229 (429)
T ss_pred HHHHHhCCCCEEEEECCC-------------CCc------------chHHHHHHHHHHhhhcCCcEEEEEeccccChhHH
Confidence 344445579999999988 311 1123345555555555556677777676665555
Q ss_pred HHHHhCCc--ccceeeEe
Q psy4974 194 VFSMKYPH--MVHKLVIW 209 (345)
Q Consensus 194 ~~a~~~p~--~v~~lvl~ 209 (345)
..|..+-+ .+.++|+.
T Consensus 230 ~~a~~F~~~~~~~g~IlT 247 (429)
T TIGR01425 230 AQAKAFKDSVDVGSVIIT 247 (429)
T ss_pred HHHHHHHhccCCcEEEEE
Confidence 55554422 35666654
No 307
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=31.00 E-value=2.1e+02 Score=24.45 Aligned_cols=42 Identities=14% Similarity=0.110 Sum_probs=26.0
Q ss_pred CCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeE-EEEeCCCC
Q psy4974 90 GSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFT-SIFWDPPG 131 (345)
Q Consensus 90 g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~-vi~~D~~G 131 (345)
|...|.|++++-..+......+...+.|.+.|+. |-.++.+.
T Consensus 25 g~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~~ 67 (250)
T TIGR02069 25 GGEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVRE 67 (250)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecCC
Confidence 4445688999876655334455566677777773 55556543
No 308
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=30.91 E-value=94 Score=30.05 Aligned_cols=46 Identities=9% Similarity=0.115 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhCCccEEEEEe------ChhHHHHHHHHHhCCcccceeeEeccCC
Q psy4974 165 VDIAYELLKLLGVCKVSLFGW------CDGGHLSFVFSMKYPHMVHKLVIWGTKS 213 (345)
Q Consensus 165 ~~~~~~~l~~~~~~~i~lvGh------S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 213 (345)
...+.+++.. .++++++|| +.|+.+++..-+..-.+ .+.+.++|.-
T Consensus 327 s~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~~ 378 (655)
T COG3887 327 STALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPED 378 (655)
T ss_pred HHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECccc
Confidence 3344444443 579999999 78999998855544333 5677777643
No 309
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=29.94 E-value=1.1e+02 Score=23.09 Aligned_cols=14 Identities=0% Similarity=0.031 Sum_probs=10.7
Q ss_pred HHhhCCCCeEEEEe
Q psy4974 114 LTAFDPKLFTSIFW 127 (345)
Q Consensus 114 ~~~L~~~G~~vi~~ 127 (345)
+..|.+.|++|+.+
T Consensus 101 ~~~L~~~GwrvlvV 114 (150)
T COG3727 101 IKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHcCCeEEEE
Confidence 46788889998765
No 310
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=28.45 E-value=93 Score=26.19 Aligned_cols=33 Identities=21% Similarity=0.154 Sum_probs=23.8
Q ss_pred HHHHHHHhCCc--cEEEEEeChhHHHHHHHHHhCC
Q psy4974 168 AYELLKLLGVC--KVSLFGWCDGGHLSFVFSMKYP 200 (345)
Q Consensus 168 ~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~p 200 (345)
+.+.+...++. .-.++|-|.|+.+|..++...+
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 34444445654 3479999999999999998654
No 311
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=28.39 E-value=2.3e+02 Score=22.28 Aligned_cols=61 Identities=11% Similarity=0.092 Sum_probs=48.0
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 282 DVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 282 ~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+..++++...-|.-.+....+++.+.+.+.++.+|--+|....-++...+.+.+..++.+.
T Consensus 39 ~yD~i~lG~w~d~G~~d~~~~~fl~~l~~KkV~lF~T~G~~~~s~~~~~~~~~~~~~~~~~ 99 (160)
T PF12641_consen 39 DYDLIFLGFWIDKGTPDKDMKEFLKKLKGKKVALFGTAGAGPDSEYAKKILKNVEALLPKG 99 (160)
T ss_pred CCCEEEEEcCccCCCCCHHHHHHHHHccCCeEEEEEecCCCCchHHHHHHHHHHHHhhccC
Confidence 4568888888888888888889988898888888877777666666777777777777654
No 312
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=28.28 E-value=1.4e+02 Score=24.59 Aligned_cols=39 Identities=13% Similarity=0.086 Sum_probs=25.7
Q ss_pred CceEEEEcCcCCCc--hhhHHHHHHhhCCCCeEEEEeCCCC
Q psy4974 93 AQVLFFTYGVLGEI--RNSFKKQLTAFDPKLFTSIFWDPPG 131 (345)
Q Consensus 93 ~p~vv~lHG~~~~~--~~~~~~~~~~L~~~G~~vi~~D~~G 131 (345)
+.+|+++||-.+.. ....+...+.|.+.|.+|-.-.++|
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g 195 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPG 195 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCC
Confidence 35899999997762 2334566788888887777777775
No 313
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=28.11 E-value=2e+02 Score=19.55 Aligned_cols=39 Identities=23% Similarity=0.236 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHHH----hCCccEEEEEeChhHHHHHHHHHhC
Q psy4974 161 IEEDVDIAYELLKL----LGVCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 161 ~~~~~~~~~~~l~~----~~~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
....++...++++. -+.+++.++|-|.|=.+|.+.+..+
T Consensus 19 C~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 19 CARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 44445555555554 3456899999999988887766654
No 314
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=27.66 E-value=2.6e+02 Score=25.87 Aligned_cols=102 Identities=15% Similarity=0.033 Sum_probs=60.9
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC---CCCCCCCCccchHHHHHHHHHH
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL---PKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~---~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
+++++.--.+.. ..-....+.+.+.|+-|+-.|..+ +-..- .....| ....++.+.+++...
T Consensus 50 ~villSd~~G~~-d~~~s~a~al~~~~Alv~~vd~~~-------------ylaaL~~dd~ecvy-lisd~Ealsr~~Qr~ 114 (456)
T COG3946 50 LVILLSDEAGIG-DQERSRADALLARGALVAPVDLGA-------------YLAALGADDNECVY-LISDFEALSREAQRA 114 (456)
T ss_pred eeEEEEcccChh-hhhcchhHHHhhcCCeeeccccch-------------hhhccccCCCcceE-EehhHHHHhHHHHHH
Confidence 566665544443 333445666777779999999877 53221 112233 344555555555544
Q ss_pred HHHhCCccEEEEEeChhHHHHHHHHHhCCc-ccceeeEecc
Q psy4974 172 LKLLGVCKVSLFGWCDGGHLSFVFSMKYPH-MVHKLVIWGT 211 (345)
Q Consensus 172 l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~ 211 (345)
...-....-+|.|---||.+++..+++.|+ .+.+.+-+++
T Consensus 115 a~~g~yr~PVl~g~g~Gg~~A~asaaqSp~atlag~Vsldp 155 (456)
T COG3946 115 ADLGVYRLPVLTGPGQGGTLAYASAAQSPDATLAGAVSLDP 155 (456)
T ss_pred hhccCcccceEeecCCCcHHHHHHHhhChhhhhcCccCCCC
Confidence 433233456788899999999999988764 2444444443
No 315
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=27.20 E-value=64 Score=25.32 Aligned_cols=45 Identities=18% Similarity=0.131 Sum_probs=25.6
Q ss_pred CCCCCCCCCCCCCccchHHHHHHH----HHHHHHhC----CccEEEEEeChhHH
Q psy4974 145 YGQSLPKGRSFVPFQYIEEDVDIA----YELLKLLG----VCKVSLFGWCDGGH 190 (345)
Q Consensus 145 ~G~s~~~~~~~~~~~~~~~~~~~~----~~~l~~~~----~~~i~lvGhS~Gg~ 190 (345)
||........+ .-.+..+++..+ ..+.+..+ .++|.|+|-|++..
T Consensus 64 HG~~~~~~~~l-~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 64 HGRDEFNNQTL-AGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp -EESSTSSSEE-TTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred eCCCcCCCcee-CCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 77763333333 334566677766 34444442 45899999999887
No 316
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=26.20 E-value=93 Score=27.39 Aligned_cols=30 Identities=7% Similarity=0.033 Sum_probs=23.0
Q ss_pred HhCCccEEEEEeChhHHHHHHHHHhCCccc
Q psy4974 174 LLGVCKVSLFGWCDGGHLSFVFSMKYPHMV 203 (345)
Q Consensus 174 ~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v 203 (345)
..++.+-.+.|.|.|+.+|..++....+.+
T Consensus 93 e~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 93 EQDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HcCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 345666689999999999999997654433
No 317
>PHA02114 hypothetical protein
Probab=25.90 E-value=66 Score=22.76 Aligned_cols=33 Identities=9% Similarity=0.147 Sum_probs=27.9
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeC
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWD 128 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D 128 (345)
+||+=-.+..+ +..|..++..|.+.||.|++-.
T Consensus 84 tivldvn~ams-r~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 84 TIVLDVNYAMS-RAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred eEEEEehhhhc-cCcHHHHHHHHHhcCceeeehh
Confidence 67777777777 6999999999999999999864
No 318
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=25.76 E-value=2.4e+02 Score=22.11 Aligned_cols=54 Identities=20% Similarity=0.066 Sum_probs=32.3
Q ss_pred HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-ccEEEEEeChhHH
Q psy4974 112 KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGV-CKVSLFGWCDGGH 190 (345)
Q Consensus 112 ~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~i~lvGhS~Gg~ 190 (345)
.+...+.+. -.++++|-+| - .+ +-+++++.+..+... +. +-++++|-+.|=.
T Consensus 59 ~il~~l~~~-~~~i~LDe~G-------------k-----------~~-sS~~fA~~l~~~~~~-g~~~i~F~IGGa~G~~ 111 (157)
T PRK00103 59 RILAALPKG-ARVIALDERG-------------K-----------QL-SSEEFAQELERWRDD-GRSDVAFVIGGADGLS 111 (157)
T ss_pred HHHhhCCCC-CEEEEEcCCC-------------C-----------cC-CHHHHHHHHHHHHhc-CCccEEEEEcCccccC
Confidence 345556554 5699999988 2 11 345556666665332 32 4566899887744
Q ss_pred HH
Q psy4974 191 LS 192 (345)
Q Consensus 191 ia 192 (345)
-.
T Consensus 112 ~~ 113 (157)
T PRK00103 112 PA 113 (157)
T ss_pred HH
Confidence 33
No 319
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=25.62 E-value=1.2e+02 Score=25.83 Aligned_cols=20 Identities=15% Similarity=0.124 Sum_probs=17.9
Q ss_pred EEEEeChhHHHHHHHHHhCC
Q psy4974 181 SLFGWCDGGHLSFVFSMKYP 200 (345)
Q Consensus 181 ~lvGhS~Gg~ia~~~a~~~p 200 (345)
.++|-|.|+.+|..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999998754
No 320
>KOG2805|consensus
Probab=25.09 E-value=1.6e+02 Score=26.01 Aligned_cols=61 Identities=13% Similarity=-0.030 Sum_probs=36.6
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHH
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKL 174 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~ 174 (345)
++|.+.|+-.|+ - -+..|+.+||.|..+=++. +-.-+... +....+.+.+++..+.++
T Consensus 8 VvvamSgGVDSs-V----aa~Ll~~~g~~v~gv~M~n-------------Wd~~de~~----s~cp~e~D~~da~~Vc~~ 65 (377)
T KOG2805|consen 8 VVVAMSGGVDSS-V----AARLLAARGYNVTGVFMKN-------------WDSLDEFG----SQCPAERDWKDAKRVCKQ 65 (377)
T ss_pred EEEEecCCchHH-H----HHHHHHhcCCCeeEEeeec-------------cccccccc----cCCCchhhHHHHHHHHHH
Confidence 677777776653 1 2345678899999998888 72222111 122445556666666666
Q ss_pred hCC
Q psy4974 175 LGV 177 (345)
Q Consensus 175 ~~~ 177 (345)
+++
T Consensus 66 LnI 68 (377)
T KOG2805|consen 66 LNI 68 (377)
T ss_pred hCC
Confidence 654
No 321
>PRK10867 signal recognition particle protein; Provisional
Probab=24.99 E-value=5.7e+02 Score=23.99 Aligned_cols=19 Identities=16% Similarity=0.267 Sum_probs=14.1
Q ss_pred HHHhhCCCCeEEEEeCCCC
Q psy4974 113 QLTAFDPKLFTSIFWDPPG 131 (345)
Q Consensus 113 ~~~~L~~~G~~vi~~D~~G 131 (345)
........+|.++.+|-+|
T Consensus 175 a~~~a~~~~~DvVIIDTaG 193 (433)
T PRK10867 175 ALEEAKENGYDVVIVDTAG 193 (433)
T ss_pred HHHHHHhcCCCEEEEeCCC
Confidence 3344445579999999999
No 322
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=24.90 E-value=40 Score=28.89 Aligned_cols=19 Identities=11% Similarity=0.095 Sum_probs=14.2
Q ss_pred CCccEEEEEeChhHHHHHH
Q psy4974 176 GVCKVSLFGWCDGGHLSFV 194 (345)
Q Consensus 176 ~~~~i~lvGhS~Gg~ia~~ 194 (345)
..+.|+++|||+|..=...
T Consensus 233 ~i~~I~i~GhSl~~~D~~Y 251 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDYPY 251 (270)
T ss_pred CCCEEEEEeCCCchhhHHH
Confidence 3468999999999754433
No 323
>KOG1252|consensus
Probab=24.88 E-value=2.4e+02 Score=25.32 Aligned_cols=55 Identities=13% Similarity=0.077 Sum_probs=31.9
Q ss_pred eeEEEcCceEEEEEcCC------CCceEEEEcCcCCCchhhHHHHHHhhCCC--CeEEEEeCCCC
Q psy4974 75 GFFSIKGCDIRFIKYGS------GAQVLFFTYGVLGEIRNSFKKQLTAFDPK--LFTSIFWDPPG 131 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~------~~p~vv~lHG~~~~~~~~~~~~~~~L~~~--G~~vi~~D~~G 131 (345)
+|-.-.+-..||...++ ..++=+|+||.|.. ..-..+-++|.++ ...|+..|.-+
T Consensus 187 Qf~np~Np~~hy~ttg~EI~~q~~g~vDi~V~gaGTG--GTitgvGRylke~~~~~kVv~vdp~~ 249 (362)
T KOG1252|consen 187 QFHNPGNPLAHYETTGPEIWRQLDGKVDIFVAGAGTG--GTITGVGRYLKEQNPNIKVVGVDPQE 249 (362)
T ss_pred HhcCCCCcccccccccHHHHHHhcCCCCEEEeccCCC--ceeechhHHHHHhCCCCEEEEeCCCc
Confidence 44444555677766553 22366777776544 2333344555443 38899999866
No 324
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.65 E-value=2.8e+02 Score=24.10 Aligned_cols=19 Identities=16% Similarity=0.366 Sum_probs=16.7
Q ss_pred EEEEeChhHHHHHHHHHhC
Q psy4974 181 SLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 181 ~lvGhS~Gg~ia~~~a~~~ 199 (345)
.++|-|.||.+|..++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 5899999999999998754
No 325
>COG3933 Transcriptional antiterminator [Transcription]
Probab=24.47 E-value=4.4e+02 Score=24.71 Aligned_cols=73 Identities=18% Similarity=0.002 Sum_probs=53.4
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
..+|+-||.... .+....+..|-.. --+.++|+|- +. +..+..+.+.+.++
T Consensus 110 ~vIiiAHG~sTA--SSmaevanrLL~~-~~~~aiDMPL-------------------------dv-sp~~vle~l~e~~k 160 (470)
T COG3933 110 KVIIIAHGYSTA--SSMAEVANRLLGE-EIFIAIDMPL-------------------------DV-SPSDVLEKLKEYLK 160 (470)
T ss_pred eEEEEecCcchH--HHHHHHHHHHhhc-cceeeecCCC-------------------------cC-CHHHHHHHHHHHHH
Confidence 489999998444 5667777777666 5788999988 22 45666788888888
Q ss_pred HhCCccEEEEEeChhHHHHHHH
Q psy4974 174 LLGVCKVSLFGWCDGGHLSFVF 195 (345)
Q Consensus 174 ~~~~~~i~lvGhS~Gg~ia~~~ 195 (345)
+....+=.++=-.||...+..-
T Consensus 161 ~~~~~~GlllLVDMGSL~~f~~ 182 (470)
T COG3933 161 ERDYRSGLLLLVDMGSLTSFGS 182 (470)
T ss_pred hcCccCceEEEEecchHHHHHH
Confidence 8877665666678998776653
No 326
>PF12995 DUF3879: Domain of unknown function, E. rectale Gene description (DUF3879); InterPro: IPR024540 This entry represents proteins of unknown function found primarily in Firmicutes. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture [].
Probab=23.45 E-value=21 Score=27.85 Aligned_cols=16 Identities=31% Similarity=0.343 Sum_probs=13.3
Q ss_pred CCCCCCcccCcEEEee
Q psy4974 3 QVNPSKRLSGGVFLCS 18 (345)
Q Consensus 3 ~~~~~~~~~~~~~~~~ 18 (345)
||+|++|+++||-|--
T Consensus 124 sv~k~dRlaAGWTLeQ 139 (186)
T PF12995_consen 124 SVPKDDRLAAGWTLEQ 139 (186)
T ss_pred hcCHhhhhcccccHHH
Confidence 6889999999998754
No 327
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=23.33 E-value=2.5e+02 Score=23.42 Aligned_cols=39 Identities=8% Similarity=-0.082 Sum_probs=26.9
Q ss_pred CceEEEEcCcCCCchh--hHHHHHHhhCCCCeEEEEeCCCC
Q psy4974 93 AQVLFFTYGVLGEIRN--SFKKQLTAFDPKLFTSIFWDPPG 131 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G 131 (345)
.+.|.||+-.+..... .-....+.|.+.|+.+..+++--
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~~ 72 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLSK 72 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeeccC
Confidence 3589999988776312 22345577888899998888644
No 328
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=22.55 E-value=2.7e+02 Score=24.00 Aligned_cols=63 Identities=16% Similarity=0.195 Sum_probs=33.6
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCe-EEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLF-TSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~-~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
+.+.|++-||....+...|..+...|.+.|+ +|+.--.-| + | + .+++.+
T Consensus 141 ~~a~vlmGHGt~h~an~~Y~~l~~~l~~~~~~~v~vgtvEG-------------~-----P--------~----~~~vi~ 190 (262)
T PF06180_consen 141 DEAVVLMGHGTPHPANAAYSALQAMLKKHGYPNVFVGTVEG-------------Y-----P--------S----LEDVIA 190 (262)
T ss_dssp TEEEEEEE---SCHHHHHHHHHHHHHHCCT-TTEEEEETTS-------------S-----S--------B----HHHHHH
T ss_pred CCEEEEEeCCCCCCccHHHHHHHHHHHhCCCCeEEEEEeCC-------------C-----C--------C----HHHHHH
Confidence 3356777788876655566777777766652 244333334 1 1 2 345556
Q ss_pred HHHHhCCccEEEEE
Q psy4974 171 LLKLLGVCKVSLFG 184 (345)
Q Consensus 171 ~l~~~~~~~i~lvG 184 (345)
-++.-+.+++.|+=
T Consensus 191 ~L~~~g~k~V~L~P 204 (262)
T PF06180_consen 191 RLKKKGIKKVHLIP 204 (262)
T ss_dssp HHHHHT-SEEEEEE
T ss_pred HHHhcCCCeEEEEe
Confidence 66666777777664
No 329
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=22.39 E-value=1.4e+02 Score=23.08 Aligned_cols=25 Identities=24% Similarity=0.360 Sum_probs=18.9
Q ss_pred HHHhCC--ccEEEEEeChhHHHHHHHH
Q psy4974 172 LKLLGV--CKVSLFGWCDGGHLSFVFS 196 (345)
Q Consensus 172 l~~~~~--~~i~lvGhS~Gg~ia~~~a 196 (345)
+...+. ..-.+.|.|.|+.++..++
T Consensus 20 l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 20 LAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 333444 4557899999999999988
No 330
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.18 E-value=1.6e+02 Score=26.03 Aligned_cols=34 Identities=12% Similarity=0.021 Sum_probs=27.8
Q ss_pred HHHHHHHHHHhCC----ccEEEEEeC--hhHHHHHHHHHh
Q psy4974 165 VDIAYELLKLLGV----CKVSLFGWC--DGGHLSFVFSMK 198 (345)
Q Consensus 165 ~~~~~~~l~~~~~----~~i~lvGhS--~Gg~ia~~~a~~ 198 (345)
+..+.+++++.++ +++.++|.| +|-.+|..+..+
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 6677888888765 389999997 999999998765
No 331
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=22.08 E-value=1.6e+02 Score=29.21 Aligned_cols=82 Identities=13% Similarity=0.054 Sum_probs=46.5
Q ss_pred ceEEEEcCcCCC---------chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCC--CCCcc-ch
Q psy4974 94 QVLFFTYGVLGE---------IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRS--FVPFQ-YI 161 (345)
Q Consensus 94 p~vv~lHG~~~~---------~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~--~~~~~-~~ 161 (345)
.+|++.|..... +...|+..++.|.++||+++.+|--- .++ .|....+... . +++ .+
T Consensus 49 ~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~---~~~-------~g~~~LP~KaV~L-TFDDGy 117 (672)
T PRK14581 49 FVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQIL---AAR-------NGGPTLPDKAVLL-TFDDGY 117 (672)
T ss_pred eEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHH---HHH-------hcCCCCCCCeEEE-EEEcCC
Confidence 356666665322 13678999999999999999988211 000 1111111111 1 111 23
Q ss_pred HHHHHHHHHHHHHhCCc-cEEEEEeC
Q psy4974 162 EEDVDIAYELLKLLGVC-KVSLFGWC 186 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~~~-~i~lvGhS 186 (345)
.+....+..+|++.+.. -++++|.-
T Consensus 118 ~sny~~AlPILKkyg~pATfFvVg~w 143 (672)
T PRK14581 118 SSFYRRVYPLLKAYKWSAVLAPVGTW 143 (672)
T ss_pred cchHHHHHHHHHHcCCCEEEEEechh
Confidence 34466778889999876 45566643
No 332
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=22.02 E-value=3.6e+02 Score=25.79 Aligned_cols=40 Identities=18% Similarity=0.248 Sum_probs=33.0
Q ss_pred CCceEEEEcCcCCCch-hhHHHHHHhhCCCCeEEEEeCCCC
Q psy4974 92 GAQVLFFTYGVLGEIR-NSFKKQLTAFDPKLFTSIFWDPPG 131 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G 131 (345)
+.|.||++-|+-+++. ..-..+...|..+|++|+++..|.
T Consensus 38 ~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~ 78 (493)
T TIGR03708 38 GFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS 78 (493)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC
Confidence 3478999999988742 456778899999999999999887
No 333
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=21.98 E-value=1.5e+02 Score=25.29 Aligned_cols=20 Identities=15% Similarity=0.240 Sum_probs=17.4
Q ss_pred EEEEeChhHHHHHHHHHhCC
Q psy4974 181 SLFGWCDGGHLSFVFSMKYP 200 (345)
Q Consensus 181 ~lvGhS~Gg~ia~~~a~~~p 200 (345)
.+.|-|.|+.+|..+|...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999998654
No 334
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=21.88 E-value=6.1e+02 Score=23.73 Aligned_cols=19 Identities=21% Similarity=0.261 Sum_probs=14.1
Q ss_pred HHHhhCCCCeEEEEeCCCC
Q psy4974 113 QLTAFDPKLFTSIFWDPPG 131 (345)
Q Consensus 113 ~~~~L~~~G~~vi~~D~~G 131 (345)
..+.+...+|.++.+|-+|
T Consensus 174 al~~~~~~~~DvVIIDTaG 192 (428)
T TIGR00959 174 ALEYAKENGFDVVIVDTAG 192 (428)
T ss_pred HHHHHHhcCCCEEEEeCCC
Confidence 3444445579999999999
No 335
>KOG1202|consensus
Probab=21.76 E-value=65 Score=34.09 Aligned_cols=23 Identities=26% Similarity=0.355 Sum_probs=19.1
Q ss_pred HHHHHHHHhCCccEEEEEeChhH
Q psy4974 167 IAYELLKLLGVCKVSLFGWCDGG 189 (345)
Q Consensus 167 ~~~~~l~~~~~~~i~lvGhS~Gg 189 (345)
.+.+++..+++.+=.|+|||.|-
T Consensus 571 aLtDlLs~lgi~PDGIvGHS~GE 593 (2376)
T KOG1202|consen 571 ALTDLLSCLGIRPDGIVGHSLGE 593 (2376)
T ss_pred HHHHHHHhcCCCCCcccccccch
Confidence 34577888899999999999874
No 336
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=21.08 E-value=1.3e+02 Score=27.96 Aligned_cols=40 Identities=10% Similarity=0.071 Sum_probs=23.9
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccc
Q psy4974 283 VPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHI 325 (345)
Q Consensus 283 ~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 325 (345)
..|+++.|+.|+......... .-.....+++++++|+.-+
T Consensus 377 tnviFtNG~~DPW~~lgv~~~---~~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVTSD---SSDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp -SEEEEEETT-CCGGGS--S----SSSSEEEEEETT--TTGGG
T ss_pred CeEEeeCCCCCCcccccCCCC---CCCCcccEEECCCeeeccc
Confidence 489999999999866442111 1234566789999998655
No 337
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=21.07 E-value=82 Score=26.26 Aligned_cols=29 Identities=7% Similarity=-0.134 Sum_probs=21.1
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCC
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDP 129 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~ 129 (345)
.=||++|-|-+- . +..|+++||+|+.+|+
T Consensus 39 ~rvLvPgCG~g~-D-----~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 39 GRVLVPGCGKGY-D-----MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp EEEEETTTTTSC-H-----HHHHHHTTEEEEEEES
T ss_pred CeEEEeCCCChH-H-----HHHHHHCCCeEEEEec
Confidence 467788876663 2 3356678999999997
Done!