BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4977
(63 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of
Chick Smooth Muscle Myosin With Regulatory Light Chain
In Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of
Chick Smooth Muscle Myosin With Regulatory Light Chain
In Phosphorylated State
Length = 143
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/36 (91%), Positives = 35/36 (97%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
FDQ+QIQ FKEAFNMIDQNRDGFIDKEDLHDMLAS+
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASM 36
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 35/41 (85%)
Query: 23 NVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
NVF+MFDQ QIQ+FKEAF +IDQNRDG IDK+DL + A++
Sbjct: 1 NVFSMFDQTQIQDFKEAFTVIDQNRDGIIDKDDLRETFAAM 41
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C
Alphas Provided For Regulatory Light Chain. Only
Backbone Atoms Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C
Alphas Provided For Regulatory Light Chain. Only
Backbone Atoms Provided For S2 Fragment
Length = 166
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 35/42 (83%)
Query: 22 SNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
SNVF+MFD+ +I++FKEAF +IDQN DG IDK+DL + A++
Sbjct: 13 SNVFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAM 54
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking
To Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking
To Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%)
Query: 22 SNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
SNVFAMF Q Q+Q FKEAF +IDQ++DGFI K D+ SL
Sbjct: 45 SNVFAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSL 86
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 30/42 (71%)
Query: 22 SNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
SNVFA Q +Q KEAF MIDQNRDGFID DL +M +SL
Sbjct: 11 SNVFARLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSL 52
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of
This Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of
This Allosteric Motor
Length = 157
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 28/42 (66%)
Query: 22 SNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
S V Q QIQ KEAF MIDQNRDGFID DL +M +SL
Sbjct: 7 SGVLTKLPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSL 48
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth
Muscle Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth
Muscle Myosin
Length = 161
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 29/41 (70%)
Query: 23 NVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
NVFA Q +Q KEAF MIDQNRDGFID DL +M +SL
Sbjct: 12 NVFARLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSL 52
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 29/36 (80%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
FD+ +I++FKEAF +IDQN DG IDK+DL + A++
Sbjct: 1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAM 36
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In
The Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
Q Q+Q KEAF MIDQ+RDGFI EDL DM +SL
Sbjct: 12 QRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSL 45
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility
And Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel
Nucleotide Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever
Arm) With Reconstituted Complete Light Chains
Length = 156
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 22 SNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLH 57
S V Q QIQ KEAF+MID +RDGF+ KED+
Sbjct: 6 SGVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIK 41
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 23/31 (74%)
Query: 33 IQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+Q KEAF MIDQNRDGFID DL + +SL
Sbjct: 1 MQEMKEAFTMIDQNRDGFIDINDLKEEFSSL 31
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLH 57
Q QIQ KEAF+MID +RDGF+ KED+
Sbjct: 2 QKQIQEMKEAFSMIDVDRDGFVSKEDIK 29
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLH 57
Q QIQ KEAF+MID +RDGF+ KED+
Sbjct: 3 QKQIQEMKEAFSMIDVDRDGFVSKEDIK 30
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With
Mgadp:vanadate-Transition State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With
Mgadp:vanadate-Transition State
Length = 139
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLH 57
Q QIQ KEAF+MID +RDGF+ KED+
Sbjct: 3 QKQIQEMKEAFSMIDVDRDGFVSKEDIK 30
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLH 57
QIQ KEAF+MID +RDGF+ KED+
Sbjct: 2 QIQEMKEAFSMIDVDRDGFVSKEDIK 27
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 35.0 bits (79), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDML 60
Q+ FKEAF + D R GFI KE L +L
Sbjct: 4 QVSEFKEAFELFDSERTGFITKEGLQTVL 32
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 32.3 bits (72), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + QI +FKEAF + D++ DG I E+L ++ SL
Sbjct: 3 ILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSL 39
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + QI +FKEAF + D++ DG I E+L ++ SL
Sbjct: 3 ILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSL 39
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + QI +FKEAF + D++ DG I E+L ++ SL
Sbjct: 3 ILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSL 39
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 26 AMFDQ---AQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
AM DQ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 3 AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 43
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSL 39
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 39
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 39
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 39
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 40
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 39
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 39
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 39
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 39
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 39
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 8 QISEFKEAFSLFDKDGDGCITTKELGTVMRSL 39
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
Length = 179
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 40
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In
The Crystal Structure
Length = 142
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 35
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 39
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor
State ( Crystal Form 2)
Length = 149
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 40
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor
State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant
Crystal Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1)
Post-rigor State
Length = 149
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 40
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 3 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 36
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans :
Calmodulin
Length = 149
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 40
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
Length = 146
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 37
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 40
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 35
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 39
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 8 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 41
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 39
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX
COMPLEX
Length = 144
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 37
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 37
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 40
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 39
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE
KINASE Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal
Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal
Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A
Calcineurin Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A
Calcineurin Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium
Channel Splice Variant Complexed With
Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium
Channel Splice Variant Complexed With
Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel
Splice Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel
Splice Variant And Ebio-1
Length = 149
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 40
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 39
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 39
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 12 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 45
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd),
1:2 Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A
Bis-Indol Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled
(Sail) Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From
Dap Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The
Basis Of Diversity In Molecular Recognition, 30
Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA
RECEPTOR NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel
(Cav2.1) Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel
(Cav2.1) Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide
From Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1
In Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE
BINDING MODE
Length = 148
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 39
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 40
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 39
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional
Myosin V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional
Myosin V
Length = 145
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 5 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 38
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 40
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 39 AFNMIDQNRDGFIDKEDLHDMLASL 63
AFN+ D N+DG+I KE++ D++ ++
Sbjct: 143 AFNLYDINKDGYITKEEMLDIMKAI 167
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 30.8 bits (68), Expect = 0.21, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 298 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 331
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ Q+ FKEAF++ D++ DG I +L ++ SL
Sbjct: 6 EEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSL 39
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 22/30 (73%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + FN+ D N+DG+I+KE++ D++ ++
Sbjct: 125 EKLRWTFNLYDINKDGYINKEEMMDIVKAI 154
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ K AFN+ D N+DG+I KE++ ++ S+
Sbjct: 9 EKLKWAFNLYDINKDGYITKEEMLAIMKSI 38
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 22/30 (73%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + FN+ D N+DG+I+KE++ D++ ++
Sbjct: 89 EKLRWTFNLYDINKDGYINKEEMMDIVKAI 118
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSL 40
Score = 25.4 bits (54), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
M D + KEAF + D++++GFI +L ++ +L
Sbjct: 77 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 113
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSL 40
Score = 25.4 bits (54), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
M D + KEAF + D++++GFI +L ++ +L
Sbjct: 77 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 113
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 22/30 (73%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + FN+ D N+DG+I+KE++ D++ ++
Sbjct: 89 EKLRWTFNLYDINKDGYINKEEMMDIVKAI 118
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 5 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 36
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 30.4 bits (67), Expect = 0.27, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 339
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 22/30 (73%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + FN+ D N+DG+I+KE++ D++ ++
Sbjct: 92 EKLRWTFNLYDINKDGYINKEEMMDIVKAI 121
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 30.4 bits (67), Expect = 0.28, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 23 NVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
N+ + QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 299 NLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 339
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 30.4 bits (67), Expect = 0.28, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 340
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 30.4 bits (67), Expect = 0.29, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 340
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 30.4 bits (67), Expect = 0.29, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 340
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 30.4 bits (67), Expect = 0.30, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 308 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 341
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20
Peptide Complex
Length = 148
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 39
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 30.0 bits (66), Expect = 0.30, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 340
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 39
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 30.0 bits (66), Expect = 0.31, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 340
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 30.0 bits (66), Expect = 0.32, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 339
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 30.0 bits (66), Expect = 0.32, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 270 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 303
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 30.0 bits (66), Expect = 0.33, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 306
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 30.0 bits (66), Expect = 0.34, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 306
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 29.6 bits (65), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF + D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSL 39
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 29.6 bits (65), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF + D++ DG I ++L ++ SL
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSL 39
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L + SL
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSL 39
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L + SL
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSL 39
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
Length = 149
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L + SL
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSL 40
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 29.3 bits (64), Expect = 0.55, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I + L ++ SL
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSL 340
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 28.9 bits (63), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 22/26 (84%)
Query: 35 NFKEAFNMIDQNRDGFIDKEDLHDML 60
+ K+ F+++D+++DGFID+++L +L
Sbjct: 42 DVKKVFHILDKDKDGFIDEDELGSIL 67
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 28.9 bits (63), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ K AFN+ D N+DG I KE++ ++ S+
Sbjct: 165 EKLKWAFNLYDINKDGCITKEEMLAIMKSI 194
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+++ +EAF + D++ +GFI K++L + SL
Sbjct: 34 ELEEIREAFKVFDRDGNGFISKQELGTAMRSL 65
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 28.5 bits (62), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+I+ +EAF D+++DG+I+ DL + + ++
Sbjct: 8 EIEELREAFREFDKDKDGYINCRDLGNCMRTM 39
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 28.5 bits (62), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+I+ +EAF D+++DG+I+ DL + + ++
Sbjct: 23 EIEELREAFREFDKDKDGYINCRDLGNCMRTM 54
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF + D++ +G I +L ++ SL
Sbjct: 5 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSL 40
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
Q EAF + D+N DG I +L +L S+
Sbjct: 84 QELLEAFKVFDKNGDGLISAAELKHVLTSI 113
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+I+ +EAF D+++DG+I+ DL + + ++
Sbjct: 9 EIEELREAFREFDKDKDGYINCRDLGNCMRTM 40
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+I+ +EAF D+++DG+I+ DL + + ++
Sbjct: 9 EIEELREAFREFDKDKDGYINCRDLGNCMRTM 40
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF + D++ +G I +L ++ SL
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSL 39
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ K AF + D + GFI++E+L +M+ +L
Sbjct: 111 EKVKFAFKLYDLRQTGFIEREELKEMVVAL 140
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ K AF + D + GFI++E+L +M+ +L
Sbjct: 111 EKVKFAFKLYDLRQTGFIEREELKEMVVAL 140
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 36 FKEAFNMIDQNRDGFIDKEDL 56
K AFN ID++ DG+I K D+
Sbjct: 110 LKAAFNKIDKDEDGYISKSDI 130
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF + D++ +G I +L ++ SL
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSL 39
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
Q EAF + D+N DG I +L +L S+
Sbjct: 83 QELLEAFKVFDKNGDGLISAAELKHVLTSI 112
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF + D++ +G I +L ++ SL
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSL 39
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
Q EAF + D+N DG I +L +L S+
Sbjct: 83 QELLEAFKVFDKNGDGLISAAELKHVLTSI 112
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 17/21 (80%)
Query: 37 KEAFNMIDQNRDGFIDKEDLH 57
K+ F ++DQ++ GFI++E+L
Sbjct: 44 KKVFGILDQDKSGFIEEEELQ 64
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin
(Avian Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin
(Avian Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin
(Avian Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin
(Avian Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin
(Avian Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin
(Avian Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin
(Avian Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin
(Avian Thymic Hormone)
Length = 109
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 17/21 (80%)
Query: 37 KEAFNMIDQNRDGFIDKEDLH 57
K+ F ++DQ++ GFI++E+L
Sbjct: 45 KKVFGILDQDKSGFIEEEELQ 65
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 39 AFNMIDQNRDGFIDKEDLHDML 60
AF + D+N DG+ID E+L ++L
Sbjct: 10 AFRIFDKNADGYIDIEELGEIL 31
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF + D++ G I +L ++ SL
Sbjct: 7 EEQIAEFKEAFALFDKDNSGSISASELATVMRSL 40
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
Q EAF + D+N DG I +L +L S+
Sbjct: 84 QELLEAFKVFDKNGDGLISAAELKHVLTSI 113
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ Q Q EAF++ D N DGF+D +L + +L
Sbjct: 19 EEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKAL 52
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLAS 62
+ ++ F + D+N DGFID E+L ++L +
Sbjct: 96 EELEDCFRIFDKNADGFIDIEELGEILRA 124
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 35 NFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
K F + D++R+G ID+++L D++ S+
Sbjct: 96 KLKWTFKIYDKDRNGCIDRQELLDIVESI 124
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
F++ Q++ FKEAF + D+ DG I D++ +L
Sbjct: 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRAL 39
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
Q Q+ F+ +FN D+ + G +D ED L S+
Sbjct: 721 QEQMNEFRASFNHFDRKKTGMMDCEDFRACLISM 754
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDL 56
+ Q Q EAF++ D N DGF+D +L
Sbjct: 19 EEQKQEIYEAFSLFDXNNDGFLDYHEL 45
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C
Alphas Provided For Regulatory Light Chain. Only
Backbone Atoms Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C
Alphas Provided For Regulatory Light Chain. Only
Backbone Atoms Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking
To Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking
To Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
F + Q FKEAF + D+ DG I D++ +L
Sbjct: 3 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRAL 38
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of
Chick Smooth Muscle Myosin With Regulatory Light Chain
In Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of
Chick Smooth Muscle Myosin With Regulatory Light Chain
In Phosphorylated State
Length = 148
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
F + Q FKEAF + D+ DG I D++ +L
Sbjct: 1 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRAL 36
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component
From Muscle Of The Leopard Shark (Triakis
Semifasciata). The First X-Ray Study Of An
Alpha-Parvalbumin
Length = 109
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 19/24 (79%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDML 60
KE F ++D+++ GFI++E+L +L
Sbjct: 44 KEVFEILDKDQSGFIEEEELKGVL 67
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ Q Q KEAF++ D N+ G ID +L + +L
Sbjct: 3 EEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRAL 36
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four
Different Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four
Different Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four
Different Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four
Different Ionic Environments
Length = 108
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 20/25 (80%)
Query: 33 IQNFKEAFNMIDQNRDGFIDKEDLH 57
+ + K+AF +IDQ++ GFI++++L
Sbjct: 40 LDDVKKAFYVIDQDKSGFIEEDELK 64
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDM 59
+ E F + D+N DG+ID E+L ++
Sbjct: 93 EELAECFRIFDRNADGYIDAEELAEI 118
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDML 60
+ + F + D+N DGFID E+L ++L
Sbjct: 96 EELADCFRIFDKNADGFIDIEELGEIL 122
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLAS 62
+ + F M D+N DG+ID E+L ML +
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQA 123
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLAS 62
+ + F M D+N DG+ID E+L ML +
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQA 123
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLAS 62
+ + F M D+N DG+ID E+L ML +
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQA 123
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 18/21 (85%)
Query: 37 KEAFNMIDQNRDGFIDKEDLH 57
K+AF +IDQ++ GFI++++L
Sbjct: 45 KKAFAIIDQDKSGFIEEDELK 65
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 18/21 (85%)
Query: 37 KEAFNMIDQNRDGFIDKEDLH 57
K+AF +IDQ++ GFI++++L
Sbjct: 44 KKAFAIIDQDKSGFIEEDELK 64
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake
(Pi 4.2) Parvalbumin At 1.65 A
Length = 109
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 19/23 (82%)
Query: 35 NFKEAFNMIDQNRDGFIDKEDLH 57
+ K+AF +IDQ++ GFI++++L
Sbjct: 43 DIKKAFFVIDQDKSGFIEEDELK 65
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
Q +EAF + D+ +G+I + + ++LA L
Sbjct: 91 QELREAFRLYDKEGNGYISTDVMREILAEL 120
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 35 NFKEAFNMIDQNRDGFIDKEDLH 57
+ K+AF IDQ++ GFI++++L
Sbjct: 43 DIKKAFVFIDQDKSGFIEEDELK 65
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 35 NFKEAFNMIDQNRDGFIDKEDLH 57
+ K+AF IDQ++ GFI++++L
Sbjct: 42 DIKKAFVFIDQDKSGFIEEDELK 64
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLAS 62
+ + F M D+N DG+ID E+L ML +
Sbjct: 7 EELSDLFRMFDKNADGYIDLEELKIMLQA 35
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLAS 62
+ + F M D+N DG+ID E+L ML +
Sbjct: 15 EELSDLFRMFDKNADGYIDLEELKIMLQA 43
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ F +AF + DQ+ +G+ID+ +L +L L
Sbjct: 191 KEFNKAFELYDQDGNGYIDENELDALLKDL 220
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLAS 62
+ + F M D+N DG+ID E+L ML +
Sbjct: 5 EELSDLFRMFDKNADGYIDLEELKIMLQA 33
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 39 AFNMIDQNRDGFIDKEDLHDMLAS 62
F + D+N DGFID E+L ++L +
Sbjct: 101 CFRIFDKNADGFIDIEELGEILRA 124
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 39 AFNMIDQNRDGFIDKEDLHDMLAS 62
F + D+N DGFID E+L ++L +
Sbjct: 98 CFRIFDKNADGFIDIEELGEILRA 121
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 39 AFNMIDQNRDGFIDKEDLHDML 60
F + D+N DGFID E+L ++L
Sbjct: 101 CFRIFDKNADGFIDIEELGEIL 122
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 25.8 bits (55), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
Q +EAF + D+ +G+I + + ++LA L
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAEL 32
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 22 SNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
++VF + D + + +KE + ID N DG +D E+ M+ L
Sbjct: 449 ASVFGL-DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKL 489
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLAS 62
+ + F M D+N DG+ID E+L ML +
Sbjct: 10 EELSDLFRMFDKNADGYIDLEELKIMLQA 38
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDM 59
+ E F + D+N DG+ID E+L ++
Sbjct: 93 EELAELFRIFDRNADGYIDAEELAEI 118
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 39 AFNMIDQNRDGFIDKEDLHDMLAS 62
F + D+N DGFID E+L ++L +
Sbjct: 15 CFRIFDKNADGFIDIEELGEILRA 38
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 25.4 bits (54), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 22 SNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
++VF + D + + +KE + ID N DG +D E+ M+ L
Sbjct: 166 ASVFGL-DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKL 206
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 25.0 bits (53), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ KEAF + D++++GFI +L ++ +L
Sbjct: 4 EELKEAFRVFDKDQNGFISAAELRHVMTNL 33
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.133 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,079,046
Number of Sequences: 62578
Number of extensions: 23222
Number of successful extensions: 361
Number of sequences better than 100.0: 172
Number of HSP's better than 100.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 117
Number of HSP's gapped (non-prelim): 246
length of query: 63
length of database: 14,973,337
effective HSP length: 34
effective length of query: 29
effective length of database: 12,845,685
effective search space: 372524865
effective search space used: 372524865
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 45 (21.9 bits)