RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy4977
(63 letters)
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth
muscle, myosin subfragment 2, heavy meromyosin,
essential light chain; 20.00A {Avicularia avicularia}
Length = 196
Score = 80.1 bits (198), Expect = 5e-21
Identities = 32/62 (51%), Positives = 42/62 (67%)
Query: 2 SSRKTAGRRATTKKRAQRATSNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLA 61
+ A + + K+RAQR+ SNVFAMF Q Q+Q FKEAF +IDQ++DGFI K D+
Sbjct: 25 PAAPPAPKPPSQKRRAQRSGSNVFAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFD 84
Query: 62 SL 63
SL
Sbjct: 85 SL 86
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B*
1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B*
1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Length = 166
Score = 74.5 bits (184), Expect = 3e-19
Identities = 28/51 (54%), Positives = 40/51 (78%)
Query: 13 TKKRAQRATSNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
K+RA +SNVF+MFD+ +I++FKEAF +IDQN DG IDK+DL + A++
Sbjct: 4 AKRRAAEGSSNVFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAM 54
Score = 30.6 bits (70), Expect = 0.017
Identities = 8/37 (21%), Positives = 15/37 (40%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ AF ++D + G I K L ++L +
Sbjct: 88 LKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTG 124
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y
1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y
3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y
2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Length = 156
Score = 72.5 bits (179), Expect = 1e-18
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 17 AQRATSNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
A +A S V Q QIQ KEAF+MID +RDGF+ KED+ + L
Sbjct: 1 ADKAASGVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQL 47
Score = 30.6 bits (70), Expect = 0.014
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ AF M D+ ++ E + D+L ++
Sbjct: 90 RNAFAMFDEQETKKLNIEYIKDLLENM 116
>3fwb_A Cell division control protein 31; gene gating, complex, cell
cycle, cell division, mitosis, MR transport, nuclear
pore complex, nucleus, phosphoprotein; 2.50A
{Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A
Length = 161
Score = 59.5 bits (145), Expect = 2e-13
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 13 TKKRAQRATSNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+K R+ + + + + Q Q EAF++ D N DGF+D +L + +L
Sbjct: 2 SKNRSSLQSGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKAL 52
Score = 31.0 bits (71), Expect = 0.011
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
K AF + D + G I ++L + L
Sbjct: 99 KRAFQLFDDDHTGKISIKNLRRVAKEL 125
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform;
phosphorylation, 2D crystalline arrays, myosin
regulation, M light chains, structural protein; 20.00A
{Gallus gallus}
Length = 143
Score = 57.9 bits (141), Expect = 5e-13
Identities = 33/36 (91%), Positives = 35/36 (97%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
FDQ+QIQ FKEAFNMIDQNRDGFIDKEDLHDMLAS+
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASM 36
Score = 30.9 bits (71), Expect = 0.009
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 36 FKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ AF D+ GFI ++ L ++L ++
Sbjct: 78 IRNAFACFDEEASGFIHEDHLRELLTTM 105
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle;
rigor-like, squid, contractIle protein; 2.60A
{Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B*
3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Length = 153
Score = 56.4 bits (137), Expect = 3e-12
Identities = 23/36 (63%), Positives = 26/36 (72%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
Q Q+Q KEAF MIDQ+RDGFI EDL DM +SL
Sbjct: 10 LSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSL 45
Score = 31.0 bits (71), Expect = 0.012
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 36 FKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ AF+M D++ GFI ++ L D+L ++
Sbjct: 87 LRNAFSMFDEDGQGFIPEDYLKDLLENM 114
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould,
EF-hand; 1.75A {Physarum polycephalum}
Length = 142
Score = 49.8 bits (120), Expect = 7e-10
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
Q+ FKEAF + D R GFI KE L +L
Sbjct: 4 QVSEFKEAFELFDSERTGFITKEGLQTVLKQF 35
Score = 29.8 bits (68), Expect = 0.029
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
++AF D G+I K L D L +L
Sbjct: 79 DILRQAFRTFDPEGTGYIPKAALQDALLNL 108
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand;
NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Length = 140
Score = 48.3 bits (116), Expect = 2e-09
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+K+AF++ D++ G I K + D+L +
Sbjct: 3 DDSPYKQAFSLFDRHGTGRIPKTSIGDLLRAC 34
Score = 34.4 bits (80), Expect = 5e-04
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 29 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ F + F + D++ G I +L +L SL
Sbjct: 71 MPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSL 105
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould,
EF-hand; 1.75A {Physarum polycephalum}
Length = 145
Score = 48.3 bits (116), Expect = 3e-09
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 31 AQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
A +E F + D++ DG + E+L L SL
Sbjct: 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSL 34
Score = 33.3 bits (77), Expect = 0.001
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 36 FKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+AF +D+ +G I + +L +L +L
Sbjct: 78 MLDAFRALDKEGNGTIQEAELRQLLLNL 105
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F*
1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C*
1o1g_C*
Length = 149
Score = 48.3 bits (116), Expect = 3e-09
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
F +A +FKEAF + D+ D I + D+ +L
Sbjct: 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARAL 37
Score = 34.0 bits (79), Expect = 9e-04
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 29 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
DQ ++F E + D+ +G + +L +LA+L
Sbjct: 80 DQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATL 114
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion,
structural genomics, PSI, protein structur initiative,
structural genomics of pathogenic protozoa CONS SGPP;
1.70A {Plasmodium falciparum} PDB: 2auc_A
Length = 146
Score = 46.1 bits (110), Expect = 2e-08
Identities = 4/43 (9%), Positives = 12/43 (27%)
Query: 21 TSNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
S + ++ +++ G I ++ L
Sbjct: 2 ESVADIQQLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKL 44
Score = 29.5 bits (67), Expect = 0.036
Identities = 7/37 (18%), Positives = 18/37 (48%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ D+ ++ + F D N G++ K + ++L +
Sbjct: 77 VHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTW 113
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium
binding, ME binding protein-toxin complex; 2.20A
{Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Length = 169
Score = 46.0 bits (110), Expect = 3e-08
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 1 MSSRKTAGRRATTKKRAQRATSNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDML 60
MS + A ++ R + Q Q +EAF++ D + G ID ++L +
Sbjct: 1 MSYKAKTVVSARRDQKKGRV------GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAM 54
Query: 61 ASL 63
+L
Sbjct: 55 RAL 57
Score = 30.2 bits (69), Expect = 0.021
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
+AF + D + G I +DL + L
Sbjct: 104 LKAFRLFDDDNSGTITIKDLRRVAKEL 130
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand
calcium-binding protein; 1.75A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A
1npq_A 1trf_A
Length = 90
Score = 44.1 bits (105), Expect = 4e-08
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ I FK AF+M D + G I ++L ++ L
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRML 49
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially
structured protein, CAM-like; NMR {Entamoeba
histolytica} PDB: 2lc5_A
Length = 85
Score = 43.4 bits (103), Expect = 7e-08
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + Q +KEAF + D++ D + E+L ++ +L
Sbjct: 7 VLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRAL 43
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light
chain, cell cycle protein; 1.65A {Saccharomyces
cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A
2fce_A
Length = 148
Score = 44.5 bits (106), Expect = 8e-08
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 31 AQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + K+ F + D+ G I K+ L D L ++
Sbjct: 1 SATRANKDIFTLFDKKGQGAIAKDSLGDYLRAI 33
Score = 33.0 bits (76), Expect = 0.002
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 29 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+A+ ++F +AF + D+ G + DL ML L
Sbjct: 78 TKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGL 112
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin,
myosin V, chicken, molecular motor, ATPase, ELC, IQ
motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo
sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C
1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Length = 151
Score = 43.7 bits (104), Expect = 2e-07
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
F++ Q++ FKEAF + D+ DG I D++ +L
Sbjct: 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRAL 39
Score = 34.1 bits (79), Expect = 7e-04
Identities = 8/37 (21%), Positives = 18/37 (48%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
Q +++ E F + D+ +G + +L +L +L
Sbjct: 80 NRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTL 116
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin
regulatory light chain LC-2, mantle muscle; rigor-like,
squid, contractIle protein; 2.60A {Todarodes pacificus}
PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Length = 159
Score = 44.1 bits (105), Expect = 2e-07
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 26 AMFDQAQIQNFKEAFNMID--QNRDGFIDKEDLHDMLASL 63
+ + +I+ +E F++ D RDG +D + D+L L
Sbjct: 1 SQLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCL 40
Score = 32.2 bits (74), Expect = 0.004
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 29 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
F EAF D+ G I ++ ++L L
Sbjct: 80 TGTAADEFMEAFKTFDREGQGLISSAEIRNVLKML 114
>2joj_A Centrin protein; N-terminal domain, centrin solution structure,
EF-hand calcium binding protein, cell cycle; NMR
{Euplotes octocarinatus}
Length = 77
Score = 42.1 bits (100), Expect = 2e-07
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
Q Q KEAF++ D N+ G ID +L + +L
Sbjct: 5 QKQEIKEAFDLFDTNKTGSIDYHELKVAMRAL 36
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A
{Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A
1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A
2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B*
2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Length = 148
Score = 43.2 bits (103), Expect = 2e-07
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF + D++ DG I ++L ++ SL
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSL 39
Score = 32.1 bits (74), Expect = 0.004
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
M +Q + EAF + D++ +G I +L ++ +L
Sbjct: 76 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL 112
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein;
1.90A {Homo sapiens}
Length = 107
Score = 42.4 bits (100), Expect = 3e-07
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
++++ FKE + D N +G ID L ML L
Sbjct: 26 DLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKL 61
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin;
EF-hands, calcium, metal binding protein; 2.17A {Bos
taurus} PDB: 2f2p_A
Length = 179
Score = 43.3 bits (103), Expect = 4e-07
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 40
Score = 32.5 bits (75), Expect = 0.003
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
M D + +EAF + D++ +G+I +L ++ +L
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 113
Score = 24.8 bits (55), Expect = 1.9
Identities = 2/15 (13%), Positives = 4/15 (26%)
Query: 37 KEAFNMIDQNRDGFI 51
+ I + F
Sbjct: 163 RNKIRAIGKMARVFS 177
>2hps_A Coelenterazine-binding protein with bound coelent;
bioluminescence, southeast collabora structural
genomics, secsg, structural genomics, PSI; HET: CTZ;
1.72A {Renilla muelleri} PDB: 2hq8_A
Length = 186
Score = 42.8 bits (101), Expect = 6e-07
Identities = 8/37 (21%), Positives = 14/37 (37%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
++ K +D DGFI +ED + +
Sbjct: 7 SERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRI 43
Score = 34.7 bits (80), Expect = 6e-04
Identities = 5/36 (13%), Positives = 15/36 (41%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ ++ ID ++DG++ + L ++
Sbjct: 96 EKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAV 131
Score = 26.6 bits (59), Expect = 0.45
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
FN +D N++G I +++ +
Sbjct: 141 ITCFNTLDFNKNGQISRDEFLVTVNDF 167
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus}
SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C
1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A
1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Length = 162
Score = 42.2 bits (100), Expect = 7e-07
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 26 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
A + I FK AF+M D + G I ++L ++ L
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRML 49
Score = 32.5 bits (75), Expect = 0.003
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ F + D+N DGFID E+L ++L +
Sbjct: 96 EELANCFRIFDKNADGFIDIEELGEILRAT 125
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal
binding protein; NMR {Neanthes diversicolor} SCOP:
a.39.1.5 PDB: 2scp_A
Length = 174
Score = 42.4 bits (100), Expect = 8e-07
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+Q K FN ID ++DG I + D M
Sbjct: 4 WVQKMKTYFNRIDFDKDGAITRMDFESMAERF 35
Score = 32.4 bits (74), Expect = 0.003
Identities = 6/36 (16%), Positives = 10/36 (27%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
F +D N D I +++ L
Sbjct: 88 AKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML 123
Score = 25.1 bits (55), Expect = 1.5
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDM 59
+F+ ID N DG + E+
Sbjct: 131 PASFDAIDTNNDGLLSLEEFVIA 153
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A
{Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A
Length = 147
Score = 41.7 bits (99), Expect = 9e-07
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ QI FKEAF + D++ G I +L ++ SL
Sbjct: 5 LTEEQIAEFKEAFALFDKDNSGSISASELATVMRSL 40
Score = 30.1 bits (69), Expect = 0.019
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ Q EAF + D+N DG I +L +L S+
Sbjct: 77 LKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI 113
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo
sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Length = 153
Score = 41.8 bits (99), Expect = 1e-06
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+I+ +EAF D+++DG+I+ DL + + ++
Sbjct: 9 EIEELREAFREFDKDKDGYINCRDLGNCMRTM 40
Score = 31.0 bits (71), Expect = 0.009
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 29 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
D ++ ++AF D N DG I +L + + +L
Sbjct: 83 DMIGVKELRDAFREFDTNGDGEISTSELREAMRAL 117
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide
compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB:
3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Length = 143
Score = 41.3 bits (98), Expect = 1e-06
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
Q Q +EAF++ D + G ID ++L + +L
Sbjct: 4 QKQEIREAFDLFDADGTGTIDVKELKVAMRAL 35
Score = 31.3 bits (72), Expect = 0.008
Identities = 8/37 (21%), Positives = 17/37 (45%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
M ++ + +AF + D + G I ++L + L
Sbjct: 72 MSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKEL 108
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 87
Score = 40.2 bits (95), Expect = 2e-06
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+I KE F MID + G I ++L D L +
Sbjct: 21 EIGGLKELFKMIDTDNSGTITFDELKDGLKRV 52
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding
domain, structural genomics, structural genomics
consortium, SGC; 2.30A {Homo sapiens}
Length = 91
Score = 39.6 bits (93), Expect = 3e-06
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 26 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
A D ++ + F D NR G +++E+ + L
Sbjct: 19 ADGDGEELARLRSVFAACDANRSGRLEREEFRALCTEL 56
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 188
Score = 40.7 bits (96), Expect = 3e-06
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+I KE F MID + G I ++L D L +
Sbjct: 8 EIGGLKELFKMIDTDNSGTITFDELKDGLKRV 39
Score = 31.8 bits (73), Expect = 0.005
Identities = 6/30 (20%), Positives = 14/30 (46%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+N AF+ D++ G+I +++
Sbjct: 82 ENLVSAFSYFDKDGSGYITLDEIQQACKDF 111
Score = 26.8 bits (60), Expect = 0.38
Identities = 5/23 (21%), Positives = 11/23 (47%)
Query: 35 NFKEAFNMIDQNRDGFIDKEDLH 57
N ++A ++D + I+ H
Sbjct: 161 NLRDALGLVDNGSNQVIEGYFKH 183
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer,
domain-swapping, EF-hand; 1.75A {Chenopodium album}
SCOP: a.39.1.10 PDB: 1h4b_A
Length = 86
Score = 39.2 bits (92), Expect = 3e-06
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
I + + F D N DG I +L D L +L
Sbjct: 5 DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTL 40
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure
initiative, southeast collaboratory for structural
genomics, secsg; 2.00A {Beroe abyssicola}
Length = 208
Score = 41.0 bits (96), Expect = 3e-06
Identities = 4/36 (11%), Positives = 14/36 (38%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + F+ D + DG ++ +++ +
Sbjct: 30 LHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRM 65
Score = 31.3 bits (71), Expect = 0.009
Identities = 6/37 (16%), Positives = 16/37 (43%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
++++D + DG +D ++L M+ +
Sbjct: 121 GEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAF 157
Score = 24.4 bits (53), Expect = 2.8
Identities = 4/24 (16%), Positives = 11/24 (45%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDML 60
F D ++ G +++ +L +
Sbjct: 165 YTFFEKADTDKSGKLERTELVHLF 188
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase
structural genomics malaria, structural genom
consortium, SGC, ATP-binding; 1.15A {Plasmodium
falciparum} PDB: 3o4y_A
Length = 191
Score = 40.7 bits (96), Expect = 4e-06
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
++ K F ++D++ G+I KE L L
Sbjct: 50 DVEKLKSTFLVLDEDGKGYITKEQLKKGLEKD 81
Score = 35.3 bits (82), Expect = 3e-04
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 26 AMFDQAQI--QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
A D+ Q+ + AF + D + DG I +L +L +
Sbjct: 112 AALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNG 151
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal
binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Length = 147
Score = 40.3 bits (94), Expect = 4e-06
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 25 FAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
++++ FK + D N +G ID L ML L
Sbjct: 39 NDEDLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKL 77
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous
protein, calcium-binding protein, NHE1 regulating
protein; 2.70A {Homo sapiens}
Length = 202
Score = 40.5 bits (95), Expect = 4e-06
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLA 61
F QA + F +D+N+ G++ + DL + A
Sbjct: 23 FSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGA 56
Score = 35.1 bits (81), Expect = 4e-04
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ AF + D +RDG I + ++ +L +
Sbjct: 112 RRNKLHYAFQLYDLDRDGKISRHEMLQVLRLM 143
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR
{Saccharopolyspora erythraea} SCOP: a.39.1.5
Length = 176
Score = 40.1 bits (94), Expect = 6e-06
Identities = 5/32 (15%), Positives = 13/32 (40%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
K+ F+ D + +G +++ D +
Sbjct: 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHI 36
Score = 33.6 bits (77), Expect = 0.001
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
F++ K M D+N DG I+ ++ L +L
Sbjct: 96 FNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTAL 131
Score = 25.1 bits (55), Expect = 1.5
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLA 61
EAFN +D N +G + ++L +
Sbjct: 139 AEAFNQVDTNGNGELSLDELLTAVR 163
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein
targeting, AKA beta-augmentation, calmodulin-binding,
membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B*
2p6b_B 1aui_B 1m63_B* 1tco_B*
Length = 155
Score = 39.9 bits (94), Expect = 6e-06
Identities = 6/33 (18%), Positives = 14/33 (42%)
Query: 29 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLA 61
D +I+ + F +D + G + E+ +
Sbjct: 1 DADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPE 33
Score = 33.7 bits (78), Expect = 0.001
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ AF + D ++DG+I +L +L +
Sbjct: 78 RFAFRIYDMDKDGYISNGELFQVLKMM 104
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z
1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z
3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z
2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Length = 156
Score = 39.8 bits (94), Expect = 6e-06
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 28 FDQAQIQNFKEAFNMIDQ--NRDGFIDKEDLHDMLASL 63
Q +I + K+ F + D RDG +D L D+ L
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCL 40
Score = 33.7 bits (78), Expect = 0.001
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 29 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+Q ++ EAF D+ GFI +L +L +L
Sbjct: 79 EQGTFADYMEAFKTFDREGQGFISGAELRHVLTAL 113
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1;
calmodulin-like domain, EF calcium binding protein,
transferase; 2.00A {Arabidopsis thaliana}
Length = 166
Score = 39.8 bits (94), Expect = 6e-06
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+I KE FNMID ++ G I E+L L +
Sbjct: 25 EIAGLKEMFNMIDADKSGQITFEELKAGLKRV 56
Score = 32.1 bits (74), Expect = 0.004
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
AF D++ G+I ++L
Sbjct: 102 FAAFTYFDKDGSGYITPDELQQACEEF 128
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand,
helix-loop- helix, nervous system, metal binding
protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Length = 83
Score = 38.4 bits (90), Expect = 7e-06
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ AF +D N DG++ +L + +L
Sbjct: 3 CKVKAELEAAFKKLDANGDGYVTALELQTFMVTL 36
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent
protein; HET: CZN; 1.60A {Aequorea victoria} SCOP:
a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Length = 191
Score = 39.4 bits (92), Expect = 9e-06
Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 20 ATSNVFAMFDQA-QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
A S + + FD I K FN +D N +G I +++ + +
Sbjct: 1 ANSKLTSDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDI 45
Score = 33.6 bits (77), Expect = 0.001
Identities = 4/27 (14%), Positives = 14/27 (51%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
F+++D++++G I ++ +
Sbjct: 112 DALFDIVDKDQNGAITLDEWKAYTKAA 138
Score = 22.8 bits (49), Expect = 10.0
Identities = 5/23 (21%), Positives = 12/23 (52%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDM 59
+E F + D + G +D +++
Sbjct: 148 EETFRVCDIDESGQLDVDEMTRQ 170
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein;
1.50A {Streptomyces coelicolor} PDB: 3aka_A
Length = 166
Score = 39.3 bits (92), Expect = 9e-06
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ F DQ+ +G ID+ D ++
Sbjct: 4 RRIAARFTTFDQDGNGHIDRSDFSGAAKAM 33
Score = 33.6 bits (77), Expect = 0.001
Identities = 7/36 (19%), Positives = 12/36 (33%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
F + A + D + DG + D L +
Sbjct: 92 FAEMARPFLHAALGVADTDGDGAVTVADTARALTAF 127
Score = 23.9 bits (52), Expect = 3.4
Identities = 5/25 (20%), Positives = 13/25 (52%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLA 61
++A +D + DG + + ++ A
Sbjct: 135 RQAAAALDTDGDGKVGETEIVPAFA 159
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin
crosslinking, ionized calciu binding adapter molecule
2, metal-binding protein; 2.15A {Homo sapiens} PDB:
2jjz_B 2vtg_A
Length = 150
Score = 39.1 bits (91), Expect = 1e-05
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
++ FKE + D N +G ID L M+ L
Sbjct: 44 NLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKL 79
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural
genomics, structural genomics CONS SGC; 2.00A
{Plasmodium falciparum K1}
Length = 197
Score = 39.5 bits (93), Expect = 1e-05
Identities = 7/32 (21%), Positives = 16/32 (50%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+I N + F +D + G + +++ D L +
Sbjct: 55 EINNLRNIFIALDVDNSGTLSSQEILDGLKKI 86
Score = 30.6 bits (70), Expect = 0.017
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLA 61
F D + +G I E+L +
Sbjct: 132 LIPFKFFDIDGNGKISVEELKRIFG 156
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT
calmodulin chimera; calcium sensor, fluorescent protein;
HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A*
3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A*
3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Length = 450
Score = 39.5 bits (92), Expect = 1e-05
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 17 AQRATSNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ N + QI FKEAF++ D++ DG I ++L ++ SL
Sbjct: 295 GHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 341
Score = 32.9 bits (75), Expect = 0.003
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
M D + +EAF + D++ +G+I +L ++ +L
Sbjct: 378 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 414
Score = 30.6 bits (69), Expect = 0.018
Identities = 3/36 (8%), Positives = 14/36 (38%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
F A + + + + ++ + + ++ +L
Sbjct: 241 FKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTL 276
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein,
solution structure, backbone dynamic, structural
genomics; NMR {Homo sapiens}
Length = 71
Score = 37.1 bits (87), Expect = 2e-05
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+A +++ + AF DQ+ DG I ++L +A L
Sbjct: 2 RAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGL 35
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria,
structural genomics consortium, SGC, transfe; 2.10A
{Plasmodium falciparum}
Length = 180
Score = 38.4 bits (90), Expect = 2e-05
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 29 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
I+ E F +D N +G + +++ +LAS+
Sbjct: 34 INNHIKYINELFYKLDTNHNGSLSHREIYTVLASV 68
Score = 33.0 bits (76), Expect = 0.002
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
K AFN ID++ DG+I K D+ ++
Sbjct: 108 TFLKAAFNKIDKDEDGYISKSDIVSLVHDK 137
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca
binding, EF-hand, luminescent protein; HET: CZH; 1.10A
{Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A*
1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Length = 195
Score = 38.2 bits (89), Expect = 3e-05
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLA 61
I+ K F+ +D N +G I +++ +
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDEIVSKAS 47
Score = 33.6 bits (77), Expect = 0.001
Identities = 4/27 (14%), Positives = 10/27 (37%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
F++ D++ G I ++
Sbjct: 116 DAVFDIFDKDGSGTITLDEWKAYGKIS 142
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP,
structural genomics, PSI; 1.95A {Leishmania major}
SCOP: a.39.1.8
Length = 191
Score = 38.0 bits (89), Expect = 3e-05
Identities = 9/38 (23%), Positives = 15/38 (39%)
Query: 26 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ Q E F +D + G I +L+ L+S
Sbjct: 19 SARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSA 56
Score = 33.4 bits (77), Expect = 0.001
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 31 AQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
I + +E F D + DG +D ++ L S
Sbjct: 90 HFILSMREGFRKRDSSGDGRLDSNEVRAALLSS 122
Score = 25.0 bits (55), Expect = 1.4
Identities = 4/21 (19%), Positives = 8/21 (38%)
Query: 31 AQIQNFKEAFNMIDQNRDGFI 51
+ + F D+ R G +
Sbjct: 156 IFVCRVRNVFAFYDRERTGQV 176
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium
binding, EF-hand superfamily, S genomics, protein
structure initiative, PSI; 2.10A {Danio rerio} PDB:
2q4u_A
Length = 272
Score = 38.1 bits (88), Expect = 4e-05
Identities = 7/38 (18%), Positives = 17/38 (44%)
Query: 26 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ F F + + D + +G+I+ ++L D +
Sbjct: 3 SAFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHM 40
Score = 32.7 bits (74), Expect = 0.003
Identities = 7/37 (18%), Positives = 13/37 (35%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
F + + D + G+I +L + L L
Sbjct: 97 EAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDL 133
Score = 30.0 bits (67), Expect = 0.026
Identities = 6/49 (12%), Positives = 20/49 (40%)
Query: 15 KRAQRATSNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + A + ++F++ F D +R G ++ ++ + +
Sbjct: 177 QENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDM 225
Score = 23.1 bits (49), Expect = 7.2
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 28 FDQAQIQNFKEA-FNMIDQNRDGFIDKEDLHDML 60
+ F+E D N+DG I K +L L
Sbjct: 233 ISGGDLDKFRECLLTHCDMNKDGKIQKSELALCL 266
Score = 23.1 bits (49), Expect = 9.1
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLA 61
+ D+N+DG +D DL +LA
Sbjct: 151 DAMMKIFDKNKDGRLDLNDLARILA 175
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium
dependent kinase, structural genomics, structural GE
consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Length = 191
Score = 37.7 bits (88), Expect = 4e-05
Identities = 8/37 (21%), Positives = 18/37 (48%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + + + F +D N DG +D+++L + L
Sbjct: 33 LTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKL 69
Score = 32.3 bits (74), Expect = 0.004
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLAS 62
+ AF D + G I E+L +
Sbjct: 123 ERLLAAFQQFDSDGSGKITNEELGRLFGV 151
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET:
BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A
1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T*
1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C*
2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Length = 161
Score = 37.2 bits (87), Expect = 5e-05
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 28 FDQAQIQNFKEAFNMIDQN-RDGFIDKEDLHDMLASL 63
+ Q FK AF++ DG I ++L ++ L
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML 48
Score = 31.4 bits (72), Expect = 0.007
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + F M D+N DG+ID E+L ML +
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQAT 124
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Length = 94
Score = 36.1 bits (84), Expect = 6e-05
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
M D + +EAF + D++ +G+I +L ++ +L
Sbjct: 22 MKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNL 58
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium
binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Length = 108
Score = 36.5 bits (85), Expect = 6e-05
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 24 VFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + KE F ++D ++ GFI++++L L
Sbjct: 31 QISGMSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRF 70
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR
{Rattus norvegicus} PDB: 2g9b_A
Length = 263
Score = 37.5 bits (87), Expect = 6e-05
Identities = 6/32 (18%), Positives = 16/32 (50%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
F E + D + G+++ ++L +++ L
Sbjct: 14 TASQFFEIWLHFDADGSGYLEGKELQNLIQEL 45
Score = 36.8 bits (85), Expect = 1e-04
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 25 FAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
F + F + + D + GFI+ E+L + L L
Sbjct: 94 FRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDL 132
Score = 33.7 bits (77), Expect = 0.001
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ F +AF + DQ+ +G+ID+ +L +L L
Sbjct: 191 KEFNKAFELYDQDGNGYIDENELDALLKDL 220
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein;
2.20A {Rattus norvegicus} PDB: 2e30_A
Length = 208
Score = 37.1 bits (86), Expect = 7e-05
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLA 61
F +QI F +D+ +G + +ED +
Sbjct: 23 FSHSQITRLYSRFTSLDKGENGTLSREDFQRIPE 56
Score = 33.2 bits (76), Expect = 0.002
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
AF + D ++D I +++L +L +
Sbjct: 113 NKLHFAFRLYDLDKDDKISRDELLQVLRMM 142
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal
binding Pro; NMR {Glycine max}
Length = 92
Score = 35.6 bits (83), Expect = 8e-05
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 29 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
D + KEAF + D++++G+I +L ++ +L
Sbjct: 4 DTDAEEELKEAFKVFDKDQNGYISASELRHVMINL 38
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal
binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Length = 158
Score = 36.4 bits (85), Expect = 9e-05
Identities = 6/33 (18%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 32 QIQNFKEAFNMID-QNRDGFIDKEDLHDMLASL 63
Q++ + AF + G + + + +L L
Sbjct: 11 QVKLLETAFRDFETPEGSGRVSTDQIGIILEVL 43
Score = 32.5 bits (75), Expect = 0.003
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
Q +EAF + D+ +G+I + + ++LA L
Sbjct: 91 QELREAFRLYDKEGNGYISTDVMREILAEL 120
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 37.0 bits (86), Expect = 1e-04
Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 18 QRATSNVFA--MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+A + Q + + F+ +D+N DG +D+ +L + L
Sbjct: 317 AQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKEL 364
Score = 33.1 bits (76), Expect = 0.002
Identities = 8/39 (20%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Query: 26 AMFDQAQIQN---FKEAFNMIDQNRDGFIDKEDLHDMLA 61
D+ + + + AF M D + G I +L +
Sbjct: 407 VAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFG 445
Score = 24.3 bits (53), Expect = 3.5
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDML 60
K + +D+N DG +D ++ ML
Sbjct: 455 KSVLSEVDKNNDGEVDFDEFQQML 478
Score = 23.1 bits (50), Expect = 8.5
Identities = 5/39 (12%), Positives = 17/39 (43%)
Query: 14 KKRAQRATSNVFAMFDQAQIQNFKEAFNMIDQNRDGFID 52
K+ + + + A + + +D +++G+I+
Sbjct: 362 KELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIE 400
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand,
phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Length = 204
Score = 36.6 bits (85), Expect = 1e-04
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
IQ F +D++ +D ++ LA L
Sbjct: 35 GIQGLARFFRQLDRDGSRSLDADEFRQGLAKL 66
Score = 31.9 bits (73), Expect = 0.005
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLAS 62
QA+ AF +D++ DG + +DL + +
Sbjct: 105 QAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSG 137
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 37.0 bits (86), Expect = 1e-04
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 18 QRATSNVFA--MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+A A + Q + + + F ID+N DG +D+++L D + L
Sbjct: 328 AQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKL 375
Score = 33.1 bits (76), Expect = 0.002
Identities = 8/39 (20%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 26 AMFDQAQIQN---FKEAFNMIDQNRDGFIDKEDLHDMLA 61
D+ + + + AF DQ+ +G I ++L +
Sbjct: 415 VAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFG 453
Score = 24.3 bits (53), Expect = 3.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDML 60
KE + ID N DG +D E+ M+
Sbjct: 463 KEMISGIDSNNDGDVDFEEFCKMI 486
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus}
SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Length = 108
Score = 35.7 bits (83), Expect = 1e-04
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
K+ F ID ++ G++D ++L L
Sbjct: 39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKF 70
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding
protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP:
a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A
1rjv_A 1rk9_A 1g33_A
Length = 109
Score = 35.7 bits (83), Expect = 1e-04
Identities = 8/38 (21%), Positives = 22/38 (57%)
Query: 26 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + K+ F+++D+++ GFI++++L +L
Sbjct: 33 VGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGF 70
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix,
structural genomics, protein structure initiative; NMR
{Arabidopsis thaliana} SCOP: a.39.1.5
Length = 67
Score = 34.8 bits (81), Expect = 1e-04
Identities = 6/28 (21%), Positives = 14/28 (50%)
Query: 36 FKEAFNMIDQNRDGFIDKEDLHDMLASL 63
K F D+N+DG + ++ ++ +
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAF 30
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 36.2 bits (84), Expect = 1e-04
Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 18 QRATSNVFA--MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+A + + + + F +D+N DG +DK++L + L
Sbjct: 337 AQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVL 384
Score = 32.8 bits (75), Expect = 0.003
Identities = 10/39 (25%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 26 AMFDQAQIQN---FKEAFNMIDQNRDGFIDKEDLHDMLA 61
D+ + + + AFN+ D ++ G I KE+L ++
Sbjct: 424 VCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFG 462
Score = 23.1 bits (50), Expect = 9.4
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDML 60
+ DQN+D ID ++ M+
Sbjct: 472 NDVLGEADQNKDNMIDFDEFVSMM 495
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding
protein, CBP40, metal binding protein; 3.00A {Physarum
polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Length = 323
Score = 36.3 bits (84), Expect = 2e-04
Identities = 6/32 (18%), Positives = 11/32 (34%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
++ F + G +DL +LA
Sbjct: 120 DTNILRQLFLSSAVSGSGKFSFQDLKQVLAKY 151
Score = 33.2 bits (76), Expect = 0.002
Identities = 6/31 (19%), Positives = 13/31 (41%)
Query: 33 IQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ F ID N +G + +++ + L
Sbjct: 187 LAALVADFRKIDTNSNGTLSRKEFREHFVRL 217
Score = 31.3 bits (71), Expect = 0.011
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 31 AQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + + D ++ G + KE++ +L
Sbjct: 250 LCLLVLRILYAFADFDKSGQLSKEEVQKVLEDA 282
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 36.2 bits (84), Expect = 2e-04
Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 18 QRATSNVFA--MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+A A + + + E F +D N DG +D+++L
Sbjct: 313 AQAALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEF 360
Score = 33.9 bits (78), Expect = 0.001
Identities = 8/39 (20%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 26 AMFDQAQIQN---FKEAFNMIDQNRDGFIDKEDLHDMLA 61
+ D+ + + + AF M D++ G I ++L + +
Sbjct: 406 SAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFS 444
Score = 24.3 bits (53), Expect = 2.9
Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Query: 8 GRRATTKKRAQRATSNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
G + K + S + ++ + +D N+DG +D + +ML +
Sbjct: 430 GSGKISTKELFKLFSQADSSIQMEEL---ESIIEQVDNNKDGEVDFNEFVEMLQNF 482
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo
pealeii}
Length = 191
Score = 36.0 bits (83), Expect = 2e-04
Identities = 9/38 (23%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Query: 27 MFDQAQIQNFKEAFN-MIDQNRDGFIDKEDLHDMLASL 63
Q FN D N DG I+ +D + +
Sbjct: 5 QLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKI 42
Score = 32.9 bits (75), Expect = 0.003
Identities = 7/36 (19%), Positives = 14/36 (38%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + F++ D + D IDK + + S
Sbjct: 103 LPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSY 138
Score = 25.2 bits (55), Expect = 1.2
Identities = 3/25 (12%), Positives = 8/25 (32%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLA 61
AF+ + + +E +
Sbjct: 146 DAAFDTLSDGGKTMVTREIFARLWT 170
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding
protein, metal binding protein; NMR {Branchiostoma
lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Length = 81
Score = 34.4 bits (80), Expect = 2e-04
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ AF + D N DG ID ++ ++ +
Sbjct: 6 DEEEILRAFKVFDANGDGVIDFDEFKFIMQKV 37
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal
binding protein; NMR {Entamoeba histolytica} SCOP:
a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Length = 134
Score = 35.2 bits (82), Expect = 3e-04
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
K + ++D + DG + KE++
Sbjct: 78 KVLYKLMDVDGDGKLTKEEVTSFFKKH 104
Score = 34.8 bits (81), Expect = 4e-04
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ F ID N DG + E++ ++
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKK 29
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform
A; EF-hand like, unknown function; 1.60A {Homo sapiens}
SCOP: a.39.1.7
Length = 105
Score = 34.8 bits (80), Expect = 3e-04
Identities = 6/50 (12%), Positives = 12/50 (24%)
Query: 14 KKRAQRATSNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
A R + + F D + I +E+ +
Sbjct: 4 MATADRDILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRR 53
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis
semifasciata} SCOP: a.39.1.4
Length = 109
Score = 34.5 bits (80), Expect = 3e-04
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
KE F ++D+++ GFI++E+L +L
Sbjct: 41 AQVKEVFEILDKDQSGFIEEEELKGVLKGF 70
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand,
cross-reactivity; 1.75A {Phleum pratense} SCOP:
a.39.1.10
Length = 78
Score = 33.7 bits (78), Expect = 4e-04
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 36 FKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ F D N DG I +L D L +L
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRTL 32
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding
protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A
2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A
1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Length = 108
Score = 34.5 bits (80), Expect = 4e-04
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 35 NFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ K+AF +IDQ++ GFI++++L L +
Sbjct: 42 DVKKAFYVIDQDKSGFIEEDELKLFLQNF 70
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4
PDB: 2pas_A 3pat_A
Length = 110
Score = 34.5 bits (80), Expect = 4e-04
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 35 NFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ K+ F ID + GFI++E+L +L S
Sbjct: 43 DVKKVFKAIDADASGFIEEEELKFVLKSF 71
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand,
structural genomics, seattle S genomics center for
infectious disease, ssgcid; 1.90A {Entamoeba
histolytica} PDB: 3sia_A 3sib_A
Length = 220
Score = 35.1 bits (81), Expect = 4e-04
Identities = 6/36 (16%), Positives = 13/36 (36%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
Q + F +D++R G ++ +L
Sbjct: 45 IPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPG 80
Score = 33.2 bits (76), Expect = 0.002
Identities = 6/31 (19%), Positives = 13/31 (41%)
Query: 33 IQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
++ F M + R G ++ ++ L L
Sbjct: 116 MELAYNLFVMNARARSGTLEPHEILPALQQL 146
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand,
acetylation, calcium, metal binding protein; 1.95A
{Gallus gallus} PDB: 2kqy_A
Length = 109
Score = 33.8 bits (78), Expect = 6e-04
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
K+ F ++DQ++ GFI++E+L L +
Sbjct: 35 GLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNF 71
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo
sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Length = 183
Score = 34.4 bits (79), Expect = 8e-04
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
AF + D + DG +++EDL ++ L
Sbjct: 101 HYAFRIFDFDDDGTLNREDLSRLVNCL 127
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP:
a.39.1.4
Length = 109
Score = 33.4 bits (77), Expect = 8e-04
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ K+AF +IDQ++ GFI++++L L
Sbjct: 42 DDIKKAFFVIDQDKSGFIEEDELKLFLQVF 71
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma
lanceolatum} SCOP: a.39.1.5
Length = 185
Score = 34.1 bits (78), Expect = 0.001
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 32 QIQNFKEAFN-MIDQNRDGFIDKEDLHDMLASL 63
Q Q K F+ +D N DG I D DM+
Sbjct: 6 QKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRY 38
Score = 32.2 bits (73), Expect = 0.004
Identities = 6/36 (16%), Positives = 12/36 (33%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
F +D + DG +D E+ + +
Sbjct: 99 LPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNF 134
Score = 24.5 bits (53), Expect = 2.5
Identities = 3/25 (12%), Positives = 7/25 (28%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLA 61
+N+I D ++
Sbjct: 142 PAVYNVITDGGKVTFDLNRYKELYY 166
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium
binding protein, apoptosis, calcium, endoplasmic
reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB:
2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Length = 172
Score = 33.8 bits (78), Expect = 0.001
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
F +D++R G I +L L++
Sbjct: 5 DQSFLWNVFQRVDKDRSGVISDTELQQALSNG 36
Score = 31.8 bits (73), Expect = 0.005
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 31 AQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
I +++ F D++ G IDK +L L+
Sbjct: 71 KYITDWQNVFRTYDRDNSGMIDKNELKQALSGF 103
Score = 23.3 bits (51), Expect = 5.9
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 31 AQIQNFKEAFNMIDQNRDGFI 51
+Q + F D ++DG+I
Sbjct: 137 IVLQRLTDIFRRYDTDQDGWI 157
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated,
SEN membrane targeting, EF-hand, cell projection,
cilium; 2.00A {Trypanosoma cruzi}
Length = 219
Score = 33.7 bits (77), Expect = 0.001
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
F+ ID + + +D+E+ + L
Sbjct: 133 TVMFDEIDASGNMLVDEEEFKRAVPKL 159
Score = 31.4 bits (71), Expect = 0.008
Identities = 10/50 (20%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 8 GRRATTKKRAQRATSNVFAM-FDQAQIQNFKEAFNMIDQNRDGFIDKEDL 56
G++A +K A Q E F D+N G + +++
Sbjct: 21 GKKAKDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEV 70
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to
SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis
thaliana} PDB: 1v1g_A 1v1f_A
Length = 207
Score = 33.6 bits (77), Expect = 0.002
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
K AF + D + GFI++E+L +M+ +L
Sbjct: 114 KFAFKLYDLRQTGFIEREELKEMVVAL 140
Score = 24.7 bits (54), Expect = 1.8
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 28 FDQAQIQNFKEAFNMIDQNR--DGFIDKEDLHDML 60
F +++ E F + + DG I KE+ L
Sbjct: 31 FTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLAL 65
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15);
calcium binding, signaling domain, NPF binding, FW
binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP:
a.39.1.6
Length = 95
Score = 32.4 bits (74), Expect = 0.002
Identities = 7/31 (22%), Positives = 16/31 (51%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDML 60
A+ + E F D++ DGF+ ++ ++
Sbjct: 6 PAEKAKYDEIFLKTDKDMDGFVSGLEVREIF 36
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase
activating protein, GCAP, GCAP3, GCAP-3, lyase
activator; 3.00A {Homo sapiens}
Length = 211
Score = 32.8 bits (75), Expect = 0.002
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
Q K F + D + +G IDK +L DM ++
Sbjct: 93 QKLKWYFKLYDADGNGSIDKNELLDMFMAV 122
Score = 25.1 bits (55), Expect = 1.7
Identities = 4/36 (11%), Positives = 8/36 (22%), Gaps = 2/36 (5%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + F M G + +L
Sbjct: 16 VPTQETHVWYRTFMMEYP--SGLQTLHEFKTLLGLQ 49
Score = 24.0 bits (52), Expect = 3.8
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDML 60
F+ ID N DG + E+ + +
Sbjct: 138 NLVFHKIDINNDGELTLEEFINGM 161
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport,
ionic channel, membrane, PO potassium channel, potassium
transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Length = 229
Score = 32.5 bits (74), Expect = 0.003
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ AFN+ D N+DG+I KE++ D++ ++
Sbjct: 138 EKLNWAFNLYDINKDGYITKEEMLDIMKAI 167
Score = 24.8 bits (54), Expect = 1.9
Identities = 5/24 (20%), Positives = 13/24 (54%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDML 60
+ F +D+N+DG + ++ +
Sbjct: 189 ETFFQKMDKNKDGVVTIDEFIESC 212
Score = 24.1 bits (52), Expect = 3.8
Identities = 5/36 (13%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
F + ++Q F G +++E ++ +
Sbjct: 61 FTKKELQILYRGFKNECP--SGVVNEETFKEIYSQF 94
Score = 22.9 bits (49), Expect = 9.8
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 40 FNMIDQNRDGFIDKEDLHDMLASL 63
FN D + +G + ED L+ L
Sbjct: 108 FNAFDTDHNGAVSFEDFIKGLSIL 131
>2zfd_A Calcineurin B-like protein 2; calcium binding protein,
protein-protein complex, ATP-bindin kinase,
nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP:
a.39.1.5 PDB: 1uhn_A
Length = 226
Score = 32.9 bits (75), Expect = 0.003
Identities = 6/27 (22%), Positives = 16/27 (59%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
+F + D + GFI+++++ M+ +
Sbjct: 125 HFSFQLYDLKQQGFIERQEVKQMVVAT 151
Score = 24.4 bits (53), Expect = 2.8
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDML 60
+ F D DG IDKE+ ++
Sbjct: 169 DKTFEEADTKHDGKIDKEEWRSLV 192
Score = 23.6 bits (51), Expect = 5.3
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 28 FDQAQIQNFKEAFNMIDQNR--DGFIDKEDLHDML 60
F ++I+ E F I DG I+KE+ L
Sbjct: 42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLAL 76
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell
junction, cell projection, coiled coil, endocytosis,
membrane, phosphoprotein; NMR {Homo sapiens}
Length = 111
Score = 32.0 bits (73), Expect = 0.003
Identities = 6/31 (19%), Positives = 13/31 (41%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDML 60
Q+ +++ FN D+ G + +L
Sbjct: 10 QSSRLKYRQLFNSHDKTMSGHLTGPQARTIL 40
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium,
RAS signal transduction, endocytosis/exocytosis
complex; NMR {Mus musculus} SCOP: a.39.1.6
Length = 92
Score = 31.6 bits (72), Expect = 0.004
Identities = 7/33 (21%), Positives = 11/33 (33%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLAS 62
Q Q + F I + +GFI +
Sbjct: 5 DEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK 37
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein,
EF-finger, transport protein; 2.30A {Homo sapiens} SCOP:
a.39.1.5
Length = 224
Score = 32.3 bits (73), Expect = 0.005
Identities = 10/27 (37%), Positives = 21/27 (77%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ FN+ D N+DG+I+KE++ D++ ++
Sbjct: 128 RWTFNLYDINKDGYINKEEMMDIVKAI 154
Score = 23.8 bits (51), Expect = 5.1
Identities = 5/23 (21%), Positives = 12/23 (52%)
Query: 38 EAFNMIDQNRDGFIDKEDLHDML 60
F +D+N+DG + ++ +
Sbjct: 177 VFFQKMDKNKDGIVTLDEFLESC 199
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein,
EF-hand, calcium ION, metal binding protein; HET: 1PE
P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Length = 190
Score = 32.1 bits (73), Expect = 0.005
Identities = 7/27 (25%), Positives = 18/27 (66%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ AF + D + DG+I + ++ D++ ++
Sbjct: 102 RWAFKLYDLDNDGYITRNEMLDIVDAI 128
Score = 23.3 bits (50), Expect = 6.9
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 40 FNMIDQNRDGFIDKEDLHDML 60
F M+D+N DG + ++ +
Sbjct: 153 FAMMDKNADGKLTLQEFQEGS 173
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand,
transport protein; 2.00A {Rattus norvegicus} SCOP:
a.39.1.5 PDB: 2nz0_A 2i2r_E
Length = 183
Score = 32.1 bits (73), Expect = 0.005
Identities = 10/30 (33%), Positives = 22/30 (73%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + FN+ D N+DG+I+KE++ D++ ++
Sbjct: 92 EKLRWTFNLYDINKDGYINKEEMMDIVKAI 121
Score = 24.0 bits (52), Expect = 3.5
Identities = 5/39 (12%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 22 SNVFAMFDQAQIQNF-KEAFNMIDQNRDGFIDKEDLHDM 59
+ + + + F +D+N+DG + ++ +
Sbjct: 127 KYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLES 165
Score = 23.2 bits (50), Expect = 8.1
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 40 FNMIDQNRDGFIDKEDLHDMLASL 63
FN D + G + ED L+ L
Sbjct: 62 FNAFDTTQTGSVKFEDFVTALSIL 85
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free
energy, dynamic behaviour, cytoskeleton, metal binding;
2.50A {Entamoeba histolytica}
Length = 66
Score = 30.6 bits (70), Expect = 0.006
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ F ID N DG + E++ ++
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKK 29
Score = 29.5 bits (67), Expect = 0.015
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ F ID + +G ID+ + S+
Sbjct: 39 QLIFKSIDADGNGEIDQNEFAKFYGSI 65
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate
cyclase activating protein, GCAP1, GCAP-1, calcium,
lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Length = 198
Score = 31.7 bits (72), Expect = 0.006
Identities = 6/27 (22%), Positives = 17/27 (62%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ F + D + +G ID+ +L +++ ++
Sbjct: 91 RWYFKLYDVDGNGCIDRGELLNIIKAI 117
Score = 25.9 bits (57), Expect = 0.83
Identities = 2/36 (5%), Positives = 9/36 (25%), Gaps = 2/36 (5%)
Query: 28 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + + F + + G + +
Sbjct: 11 LSATECHQWYKKF--MTECPSGQLTLYEFKQFFGLK 44
Score = 25.5 bits (56), Expect = 1.2
Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 19 RATSNVFAMFDQAQIQNF-KEAFNMIDQNRDGFIDKEDLHDML 60
+A + + + F F+ ID N DG + E+ + +
Sbjct: 115 KAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGV 157
Score = 22.8 bits (49), Expect = 9.2
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 40 FNMIDQNRDGFIDKEDLHDMLASL 63
F D N+DG+ID + L+ +
Sbjct: 58 FETFDFNKDGYIDFMEYVAALSLV 81
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR
{Homo sapiens} PDB: 2l4i_A 2lm5_A
Length = 214
Score = 31.4 bits (71), Expect = 0.010
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 34 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
AF + D + DG +++EDL ++ L
Sbjct: 129 IKSHYAFRIFDFDDDGTLNREDLSRLVNCL 158
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain,
POB1 EH domain, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Length = 110
Score = 30.5 bits (69), Expect = 0.012
Identities = 4/33 (12%), Positives = 10/33 (30%)
Query: 30 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLAS 62
+ Q + + F + + FI +
Sbjct: 18 EEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK 50
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein,
regulation, complex, calcium, EF- hand, calmodulin,
ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis
thaliana}
Length = 135
Score = 30.8 bits (70), Expect = 0.013
Identities = 6/37 (16%), Positives = 12/37 (32%)
Query: 27 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
M + + + F+++ I E L L
Sbjct: 33 MDVEEFVSELCKGFSLLADPERHLITAESLRRNSGIL 69
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand,
calcium-binding protein, guanylyl cyclase regulation,
lyase; NMR {Bos taurus} SCOP: a.39.1.5
Length = 204
Score = 30.9 bits (70), Expect = 0.013
Identities = 10/27 (37%), Positives = 20/27 (74%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
K F + D++R+G ID+++L D++ S+
Sbjct: 98 KWTFKIYDKDRNGCIDRQELLDIVESI 124
Score = 24.0 bits (52), Expect = 4.1
Identities = 5/23 (21%), Positives = 11/23 (47%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDM 59
F ++D+N DG + + +
Sbjct: 151 DRIFLLVDENGDGQLSLNEFVEG 173
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer,
alternative splicing, apoptosis, cytoplasm, endoplasmic
reticulum, golgi apparatus; NMR {Mus musculus}
Length = 256
Score = 30.8 bits (69), Expect = 0.014
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
K AFN+ D N+DG I KE++ ++ S+
Sbjct: 168 KWAFNLYDINKDGCITKEEMLAIMKSI 194
Score = 23.9 bits (51), Expect = 4.1
Identities = 5/24 (20%), Positives = 13/24 (54%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDML 60
+ F +D+N+DG + ++ +
Sbjct: 216 ERFFQKMDRNQDGVVTIDEFLETC 239
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal
transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB:
2jc2_A
Length = 198
Score = 30.5 bits (69), Expect = 0.016
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 31 AQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
A + +++ F D +R G +D ++L L ++
Sbjct: 100 AVLNGWRQHFISFDTDRSGTVDPQELQKALTTM 132
Score = 23.6 bits (51), Expect = 5.4
Identities = 3/21 (14%), Positives = 10/21 (47%)
Query: 31 AQIQNFKEAFNMIDQNRDGFI 51
+++ ++F D + G +
Sbjct: 164 VKLRALTDSFRRRDTAQQGVV 184
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding
protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Length = 190
Score = 30.6 bits (69), Expect = 0.018
Identities = 5/27 (18%), Positives = 15/27 (55%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
AF + D + +G I +++ ++ ++
Sbjct: 102 IWAFQLYDLDNNGLISYDEMLRIVDAI 128
Score = 24.4 bits (53), Expect = 2.9
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDML 60
+ FNM+D+N+DG + E+ +
Sbjct: 150 NKIFNMMDKNKDGQLTLEEFCEGS 173
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal
binding protein; NMR {Saccharomyces cerevisiae} SCOP:
a.39.1.5 PDB: 2ju0_A
Length = 190
Score = 30.2 bits (68), Expect = 0.026
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
AF + D N DG+I +++ ++AS+
Sbjct: 102 SWAFELYDLNHDGYITFDEMLTIVASV 128
Score = 23.3 bits (50), Expect = 7.5
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDML 60
K+ F ++D+N DG+I ++ +
Sbjct: 150 KKIFKLMDKNEDGYITLDEFREGS 173
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal
binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8
PDB: 1k95_A 1f4q_A 1f4o_A
Length = 165
Score = 30.0 bits (68), Expect = 0.028
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 31 AQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
A + +KE F +DQ+ G ++ +L + +
Sbjct: 67 AALNAWKENFMTVDQDGSGTVEHHELRQAIGLM 99
Score = 23.1 bits (50), Expect = 7.1
Identities = 3/21 (14%), Positives = 8/21 (38%)
Query: 31 AQIQNFKEAFNMIDQNRDGFI 51
+++ + F D + G
Sbjct: 131 VKLRALTDFFRKRDHLQQGSA 151
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal
specific guanylate cyclase activator; 2.40A {Bos taurus}
SCOP: a.39.1.5
Length = 193
Score = 29.4 bits (66), Expect = 0.047
Identities = 8/27 (29%), Positives = 19/27 (70%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDMLASL 63
K AF+M D + +G+I K ++ +++ ++
Sbjct: 102 KWAFSMYDLDGNGYISKAEMLEIVQAI 128
Score = 24.0 bits (52), Expect = 3.3
Identities = 9/40 (22%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 22 SNVFAMFDQAQIQNF-KEAFNMIDQNRDGFIDKEDLHDML 60
S + D++ + ++ F +D NRDG + E+
Sbjct: 134 SVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGA 173
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding,
phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Length = 167
Score = 28.9 bits (65), Expect = 0.064
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 31 AQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
A + +++ F D +R G +D ++L L ++
Sbjct: 69 AVLNGWRQHFISFDSDRSGTVDPQELQKALTTM 101
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of
cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB:
1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S
3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Length = 173
Score = 28.2 bits (63), Expect = 0.11
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 31 AQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
I+ ++ + D +R G I +L +
Sbjct: 74 NNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAA 106
Score = 26.2 bits (58), Expect = 0.57
Identities = 5/32 (15%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 32 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+++ F+ F + D + +L ++L +
Sbjct: 2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKV 32
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty
acid synthase, acyl-carrier-protein, beta-ketoacyl RED
beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces
cerevisiae}
Length = 1688
Score = 27.9 bits (62), Expect = 0.16
Identities = 9/38 (23%), Positives = 13/38 (34%), Gaps = 8/38 (21%)
Query: 17 AQRATSNVFAMFDQAQIQNFKEA---FNMIDQNRDGFI 51
+ATSN F + E R+GF+
Sbjct: 1146 NMKATSNTLEEF--EHGRTPAEMSRPA---TTTRNGFM 1178
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein
STR and functional analyses, riken structural
genomics/proteomi initiative; 2.20A {Homo sapiens} PDB:
2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A
2het_A
Length = 207
Score = 27.6 bits (61), Expect = 0.21
Identities = 6/25 (24%), Positives = 17/25 (68%)
Query: 39 AFNMIDQNRDGFIDKEDLHDMLASL 63
AF++ D + +G I K ++ +++ ++
Sbjct: 112 AFSLYDVDGNGTISKNEVLEIVMAI 136
Score = 23.4 bits (50), Expect = 6.0
Identities = 2/24 (8%), Positives = 11/24 (45%)
Query: 37 KEAFNMIDQNRDGFIDKEDLHDML 60
++ + +N D + +++ +
Sbjct: 160 EKIWKYFGKNDDDKLTEKEFIEGT 183
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme
delta1; phosphoric diester hydrolase, hydrolase, lipid
degradation, transducer; HET: I3P; 2.30A {Rattus
norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A
1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A
1qat_A
Length = 624
Score = 27.2 bits (59), Expect = 0.27
Identities = 9/39 (23%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 26 AMFDQAQIQN-FKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+M + ++Q+ D+N+D ++ ++L D L L
Sbjct: 2 SMDQRQKLQHWIHSCLRKADKNKDNKMNFKELKDFLKEL 40
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+)
requirement, hydrolase chimera; 2.80A {Rattus
norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Length = 900
Score = 27.4 bits (60), Expect = 0.28
Identities = 5/30 (16%), Positives = 13/30 (43%)
Query: 33 IQNFKEAFNMIDQNRDGFIDKEDLHDMLAS 62
I+ ++ + + +R G I +L +
Sbjct: 803 IKKWQGIYKRFETDRSGTIGSNELPGAFEA 832
Score = 25.5 bits (55), Expect = 1.2
Identities = 5/28 (17%), Positives = 13/28 (46%)
Query: 33 IQNFKEAFNMIDQNRDGFIDKEDLHDML 60
I+N+ F D ++ G + ++ +
Sbjct: 606 IRNYLTIFRKFDLDKSGSMSAYEMRMAI 633
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell
membrane, hydrolase, MEMB protease, thiol protease,
phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A
1df0_A 1u5i_A 1kfu_L 1kfx_L
Length = 714
Score = 27.1 bits (59), Expect = 0.33
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 31 AQIQNFKEAFNMIDQNRDGFIDKEDLHDML 60
+IQ +++ + ID +R G ++ ++ L
Sbjct: 602 TKIQKYQKIYREIDVDRSGTMNSYEMRKAL 631
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding
protein; NMR {Homo sapiens} SCOP: a.39.1.7
Length = 103
Score = 26.4 bits (58), Expect = 0.36
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 24 VFAMFDQAQIQNF--KEAFNMIDQNRDGFIDKEDLHDML 60
V+ D F K F + D N DG +D+++L +
Sbjct: 8 VWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALF 46
Score = 23.0 bits (49), Expect = 8.7
Identities = 4/15 (26%), Positives = 7/15 (46%)
Query: 40 FNMIDQNRDGFIDKE 54
+D N+D + E
Sbjct: 78 MKNVDTNQDRLVTLE 92
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like
domain, actin binding protein, contractIle protein;
20.00A {Gallus gallus} SCOP: i.15.1.1
Length = 863
Score = 26.8 bits (58), Expect = 0.37
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 29 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
Q Q+ F+ +FN D+ + G +D ED L S+
Sbjct: 720 SQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISM 754
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 26.6 bits (58), Expect = 0.57
Identities = 7/57 (12%), Positives = 19/57 (33%), Gaps = 17/57 (29%)
Query: 21 TSNV--FAMF--------DQAQIQNFKE----AFNMIDQNRDGFIDKEDLHDMLASL 63
T+ F + +++ F + + +++ D+H + A L
Sbjct: 55 TTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENC---YLEGNDIHALAAKL 108
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic,
ER, golgi, transport, disulfide bond, endopla
reticulum, ER-golgi transport; 1.84A {Homo sapiens}
PDB: 2vrg_A 3lcp_C
Length = 143
Score = 25.7 bits (56), Expect = 0.87
Identities = 5/22 (22%), Positives = 10/22 (45%)
Query: 39 AFNMIDQNRDGFIDKEDLHDML 60
F M D + + +D +L +
Sbjct: 73 YFKMHDYDGNNLLDGLELSTAI 94
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand,
voltage-gated sodium channel regulation, CTD binds to
FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens}
PDB: 2kbi_A
Length = 168
Score = 25.4 bits (55), Expect = 1.1
Identities = 8/31 (25%), Positives = 11/31 (35%)
Query: 33 IQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
F E + D FI+ L D +L
Sbjct: 19 FDMFYEIWEKFDPEATQFIEYSVLSDFADAL 49
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium
channel, alternative splicing, disease epilepsy,
glycoprotein, ION transport; NMR {Homo sapiens} PDB:
2kbi_A
Length = 129
Score = 25.5 bits (56), Expect = 1.1
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 33 IQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ F E + D + FI+ L D +L
Sbjct: 42 FEMFYEVWEKFDPDATQFIEFAKLSDFADAL 72
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15,
EPS15; EH domain, EF-hand, solution structure, S100
protein; NMR {Mus musculus} SCOP: a.39.1.6
Length = 99
Score = 24.4 bits (53), Expect = 1.9
Identities = 3/27 (11%), Positives = 10/27 (37%)
Query: 36 FKEAFNMIDQNRDGFIDKEDLHDMLAS 62
+++ + ++ G + D L
Sbjct: 13 YEKYYRQVEAGNTGRVLALDAAAFLKK 39
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium
free, signaling protein; HET: MSE; 1.15A {Homo sapiens}
SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A
1jwd_A 2cnp_A 2jtt_A
Length = 90
Score = 24.3 bits (53), Expect = 2.2
Identities = 6/39 (15%), Positives = 16/39 (41%)
Query: 25 FAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 63
+ + Q +D+N+D ++ ++ L +L
Sbjct: 42 LTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 80
>3a8r_A Putative uncharacterized protein; EF-hand, membrane,
oxidoreductase, transmembrane, calcium BI protein; 2.40A
{Oryza sativa japonica group}
Length = 179
Score = 24.6 bits (53), Expect = 2.3
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 24 VFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLAS 62
+ DQ + F+M+D+N DG + E++ +++A
Sbjct: 88 YEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIAL 126
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 24.6 bits (54), Expect = 2.7
Identities = 2/23 (8%), Positives = 5/23 (21%)
Query: 39 AFNMIDQNRDGFIDKEDLHDMLA 61
+ + I + L
Sbjct: 387 PHIHLMGDESACIAYIRITQYLD 409
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.128 0.343
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 851,301
Number of extensions: 35330
Number of successful extensions: 467
Number of sequences better than 10.0: 1
Number of HSP's gapped: 462
Number of HSP's successfully gapped: 274
Length of query: 63
Length of database: 6,701,793
Length adjustment: 34
Effective length of query: 29
Effective length of database: 5,752,479
Effective search space: 166821891
Effective search space used: 166821891
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.3 bits)