Diaphorina citri psyllid: psy4977

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60---
MSSRKTAGRRATTKKRAQRATSNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL
ccccccccccccHHHccccccccHHHcccHHHHHHHHHHHHHHcccccccccHHHHHHHHHcc
************************FAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL
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MSSRKTAGRRATTKKRAQRATSNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Myosin regulatory light chain sqh Required for cytokinesis, could regulate contractile ring function.very confidentP40423
Myosin regulatory light chain 12B Myosin regulatory subunit that plays an important role in regulation of both smooth muscle and nonmuscle cell contractile activity via its phosphorylation. Phosphorylation triggers actin polymerization in vascular smooth muscle. Implicated in cytokinesis, receptor capping, and cell locomotion.very confidentO14950
Myosin regulatory light chain 12B Myosin regulatory subunit that plays an important role in regulation of both smooth muscle and nonmuscle cell contractile activity via its phosphorylation. Phosphorylation triggers actin polymerization in vascular smooth muscle. Implicated in cytokinesis, receptor capping, and cell locomotion.very confidentA4IF97

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0031941 [CC]filamentous actinconfidentGO:0043234, GO:0005856, GO:0032991, GO:0015629, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0005884, GO:0005575, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0045177 [CC]apical part of cellconfidentGO:0005575, GO:0044464, GO:0005623
GO:0007275 [BP]multicellular organismal developmentconfidentGO:0032502, GO:0032501, GO:0008150, GO:0044699, GO:0044707
GO:0016460 [CC]myosin II complexconfidentGO:0043234, GO:0005856, GO:0032991, GO:0015629, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0016459, GO:0044430, GO:0005575, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0001725 [CC]stress fiberconfidentGO:0032432, GO:0005856, GO:0043228, GO:0015629, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0005575, GO:0044424, GO:0043226, GO:0044422, GO:0042641
GO:0044767 [BP]single-organism developmental processconfidentGO:0032502, GO:0008150, GO:0044699
GO:0044763 [BP]single-organism cellular processconfidentGO:0009987, GO:0008150, GO:0044699
GO:0003008 [BP]system processconfidentGO:0032501, GO:0008150, GO:0044699, GO:0044707
GO:0003674 [MF]molecular_functionconfident
GO:0030018 [CC]Z discconfidentGO:0005737, GO:0005575, GO:0043229, GO:0043232, GO:0044464, GO:0031674, GO:0005623, GO:0005622, GO:0030016, GO:0030017, GO:0044444, GO:0043228, GO:0043292, GO:0044424, GO:0043226, GO:0044422, GO:0044449
GO:0016043 [BP]cellular component organizationconfidentGO:0008150, GO:0071840
GO:0009653 [BP]anatomical structure morphogenesisconfidentGO:0032502, GO:0048856, GO:0008150
GO:0008360 [BP]regulation of cell shapeprobableGO:0022604, GO:0022603, GO:0050793, GO:0051128, GO:0065007, GO:0008150, GO:0065008, GO:0050789, GO:0050794
GO:0000281 [BP]cytokinesis after mitosisprobableGO:0000910, GO:0006996, GO:0007049, GO:0000278, GO:0044699, GO:0071840, GO:0009987, GO:0000280, GO:0016043, GO:0008150, GO:0022402, GO:0048285, GO:0044763, GO:0007067, GO:0051301
GO:0005509 [MF]calcium ion bindingprobableGO:0043169, GO:0046872, GO:0003674, GO:0005488, GO:0043167
GO:0010172 [BP]embryonic body morphogenesisprobableGO:0048598, GO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0010171, GO:0009653, GO:0007275, GO:0044699
GO:0008105 [BP]asymmetric protein localizationprobableGO:0033036, GO:0008104, GO:0008150, GO:0051179
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0007411 [BP]axon guidanceprobableGO:0032502, GO:0044707, GO:0030030, GO:0030154, GO:0048468, GO:0031175, GO:0009653, GO:0007275, GO:0044699, GO:0000904, GO:0000902, GO:0042330, GO:0048869, GO:0016043, GO:0032989, GO:0071840, GO:0048666, GO:0048667, GO:0032501, GO:0006935, GO:0030182, GO:0009987, GO:0044767, GO:0008150, GO:0007409, GO:0048731, GO:0042221, GO:0022008, GO:0048858, GO:0040011, GO:0048699, GO:0032990, GO:0009605, GO:0050896, GO:0048856, GO:0007399, GO:0048812, GO:0044763
GO:0002119 [BP]nematode larval developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0009791, GO:0002164, GO:0008150, GO:0007275, GO:0044699
GO:0072661 [BP]protein targeting to plasma membraneprobableGO:0008104, GO:0006612, GO:0061024, GO:0007009, GO:0090002, GO:0044699, GO:0072659, GO:0070727, GO:0016044, GO:0006886, GO:0016043, GO:0071840, GO:0071702, GO:0033036, GO:0006810, GO:0034613, GO:0006605, GO:0045184, GO:0044765, GO:0044763, GO:0072657, GO:0051649, GO:0051234, GO:0051179, GO:0051641, GO:0046907, GO:0090150, GO:0015031, GO:0008150, GO:0009987
GO:0055010 [BP]ventricular cardiac muscle tissue morphogenesisprobableGO:0014706, GO:0072358, GO:0003229, GO:0061061, GO:0009653, GO:0007275, GO:0044699, GO:0003205, GO:0007517, GO:0003206, GO:0003208, GO:0048513, GO:0048729, GO:0048644, GO:0032502, GO:0009887, GO:0032501, GO:0055008, GO:0009888, GO:0003007, GO:0008150, GO:0003231, GO:0007507, GO:0044707, GO:0048856, GO:0072359, GO:0048738, GO:0044767, GO:0060537, GO:0048731, GO:0060415
GO:0005859 [CC]muscle myosin complexprobableGO:0015629, GO:0043229, GO:0043228, GO:0044430, GO:0043226, GO:0005737, GO:0044446, GO:0016459, GO:0005856, GO:0043292, GO:0043234, GO:0032991, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0016460, GO:0044424, GO:0044422, GO:0044449
GO:0035254 [MF]glutamate receptor bindingprobableGO:0005102, GO:0003674, GO:0005488, GO:0005515
GO:0008307 [MF]structural constituent of muscleprobableGO:0003674, GO:0005198
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0003785 [MF]actin monomer bindingprobableGO:0003779, GO:0003674, GO:0005488, GO:0005515, GO:0008092
GO:0030010 [BP]establishment of cell polarityprobableGO:0008150, GO:0009987, GO:0007163, GO:0044763, GO:0044699
GO:0007110 [BP]cytokinesis after meiosis IprobableGO:0000910, GO:0007126, GO:0007127, GO:0033206, GO:0000003, GO:0051321, GO:0044699, GO:0009987, GO:0008150, GO:0048610, GO:0022402, GO:0007049, GO:0044763, GO:0051301
GO:0030308 [BP]negative regulation of cell growthprobableGO:0045926, GO:0040008, GO:0051128, GO:0008150, GO:0001558, GO:0065007, GO:0048519, GO:0050794, GO:0050789, GO:0048523
GO:0009792 [BP]embryo development ending in birth or egg hatchingprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0007275, GO:0044699
GO:0005911 [CC]cell-cell junctionprobableGO:0005575, GO:0030054
GO:0042694 [BP]muscle cell fate specificationprobableGO:0032502, GO:0045165, GO:0009987, GO:0048869, GO:0001708, GO:0030154, GO:0044767, GO:0044763, GO:0061061, GO:0008150, GO:0042693, GO:0042692, GO:0044699, GO:0048856
GO:0055003 [BP]cardiac myofibril assemblyprobableGO:0022607, GO:0055013, GO:0031032, GO:0030154, GO:0048468, GO:0030036, GO:0010927, GO:0014706, GO:0072358, GO:0051146, GO:0061061, GO:0009653, GO:0007275, GO:0044699, GO:0030029, GO:0048869, GO:0030239, GO:0016043, GO:0032989, GO:0048513, GO:0071840, GO:0048646, GO:0032502, GO:0055001, GO:0055002, GO:0032501, GO:0055006, GO:0055007, GO:0009987, GO:0035051, GO:0009888, GO:0044767, GO:0044763, GO:0048731, GO:0070925, GO:0006996, GO:0007507, GO:0007010, GO:0044707, GO:0048856, GO:0072359, GO:0048738, GO:0044085, GO:0060537, GO:0008150, GO:0042692
GO:0016324 [CC]apical plasma membraneprobableGO:0045177, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459
GO:0005912 [CC]adherens junctionprobableGO:0005575, GO:0070161, GO:0030054
GO:0006942 [BP]regulation of striated muscle contractionprobableGO:0044057, GO:0006937, GO:0065007, GO:0090257, GO:0051239, GO:0008150, GO:0050789
GO:0051233 [CC]spindle midzoneprobableGO:0043234, GO:0005856, GO:0005819, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044422, GO:0044424, GO:0043228, GO:0043226, GO:0015630
GO:0043197 [CC]dendritic spineprobableGO:0044309, GO:0044463, GO:0044464, GO:0030425, GO:0005575, GO:0097458, GO:0005623, GO:0043005, GO:0042995
GO:0005777 [CC]peroxisomeprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0042579, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0048518 [BP]positive regulation of biological processprobableGO:0008150, GO:0065007, GO:0050789
GO:0032154 [CC]cleavage furrowprobableGO:0005575, GO:0044464, GO:0032153, GO:0032155, GO:0005623
GO:0031672 [CC]A bandprobableGO:0005737, GO:0005575, GO:0043232, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0030016, GO:0030017, GO:0044444, GO:0043228, GO:0043292, GO:0044424, GO:0043226, GO:0044422, GO:0044449
GO:0005938 [CC]cell cortexprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0071944, GO:0044424
GO:0006955 [BP]immune responseprobableGO:0002376, GO:0050896, GO:0008150
GO:0060048 [BP]cardiac muscle contractionprobableGO:0032501, GO:0044707, GO:0006936, GO:0008015, GO:0006941, GO:0003012, GO:0060047, GO:0008150, GO:0003015, GO:0003013, GO:0044699, GO:0003008
GO:0030496 [CC]midbodyprobableGO:0005575, GO:0044464, GO:0005623
GO:0030049 [BP]muscle filament slidingprobableGO:0032501, GO:0044707, GO:0006936, GO:0009987, GO:0003012, GO:0006928, GO:0030048, GO:0033275, GO:0044763, GO:0030029, GO:0008150, GO:0070252, GO:0044699, GO:0003008
GO:0007519 [BP]skeletal muscle tissue developmentprobableGO:0032502, GO:0007517, GO:0032501, GO:0044707, GO:0048856, GO:0009888, GO:0044767, GO:0061061, GO:0014706, GO:0048513, GO:0008150, GO:0060537, GO:0060538, GO:0048731, GO:0007275, GO:0044699
GO:0048471 [CC]perinuclear region of cytoplasmprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0060288 [BP]formation of a compartment boundaryprobableGO:0032502, GO:0007389, GO:0044699, GO:0032501, GO:0048859, GO:0009952, GO:0044707, GO:0048856, GO:0007386, GO:0044767, GO:0008150, GO:0003002, GO:0009653, GO:0007275, GO:0048646
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0048747 [BP]muscle fiber developmentprobableGO:0032502, GO:0055001, GO:0055002, GO:0048856, GO:0048869, GO:0030154, GO:0048468, GO:0044767, GO:0044763, GO:0051146, GO:0061061, GO:0008150, GO:0009987, GO:0042692, GO:0044699

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3J04, chain B
Confidence level:very confident
Coverage over the Query: 28-63
View the alignment between query and template
View the model in PyMOL