RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy4987
         (299 letters)



>d2g17a1 c.2.1.3 (A:1-153,A:309-334)
           N-acetyl-gamma-glutamyl-phosphate reductase ArgC
           {Salmonella typhimurium [TaxId: 90371]}
          Length = 179

 Score = 26.5 bits (57), Expect = 2.9
 Identities = 5/27 (18%), Positives = 12/27 (44%)

Query: 272 PLCSTILSLLSLHPSMIETGLAKSTSI 298
           P      +  ++  + I  G A++ S+
Sbjct: 152 PGLLKGAAAQAVQCANIRFGFAETQSL 178


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.138    0.419 

Gapped
Lambda     K      H
   0.267   0.0621    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,085,233
Number of extensions: 49036
Number of successful extensions: 79
Number of sequences better than 10.0: 1
Number of HSP's gapped: 79
Number of HSP's successfully gapped: 3
Length of query: 299
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 214
Effective length of database: 1,240,546
Effective search space: 265476844
Effective search space used: 265476844
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (24.4 bits)