BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4988
(627 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 139/292 (47%), Gaps = 35/292 (11%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
++RY ++ +LGKG F EV K D Q+ A KV +NK ++K + I LRE
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKV--INKASAKNKDTSTI---LREVE 73
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
+ K LDHP ++KL+++ E D++SF V E G +L + + K +E +A I+ QV S
Sbjct: 74 LLKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS 132
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
+ Y++ K ++H DLKP NILL +IKI DFGLS + D
Sbjct: 133 GITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR------- 183
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATILEENT 522
GT +Y+ PE K DVWS GVI Y L G PF G N E
Sbjct: 184 -IGTAYYIAPEVL-----RGTYDEKCDVWSAGVILYILLSGTPPFYGKN--------EYD 229
Query: 523 ILKATEV-----QFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
ILK E T+S++AK IR L + RI H ++Q
Sbjct: 230 ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 139/291 (47%), Gaps = 35/291 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
++RY ++ +LGKG F EV K D Q+ A KV +NK ++K + I LRE +
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKV--INKASAKNKDTSTI---LREVEL 74
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSA 404
K LDHP ++KL+++ E D++SF V E G +L + + K +E +A I+ QV S
Sbjct: 75 LKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSG 133
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
+ Y++ K ++H DLKP NILL +IKI DFGLS + D
Sbjct: 134 ITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR-------- 183
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATILEENTI 523
GT +Y+ PE K DVWS GVI Y L G PF G N E I
Sbjct: 184 IGTAYYIAPEVL-----RGTYDEKCDVWSAGVILYILLSGTPPFYGKN--------EYDI 230
Query: 524 LKATEV-----QFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
LK E T+S++AK IR L + RI H ++Q
Sbjct: 231 LKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 139/291 (47%), Gaps = 35/291 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
++RY ++ +LGKG F EV K D Q+ A KV +NK ++K + I LRE +
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKV--INKASAKNKDTSTI---LREVEL 74
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSA 404
K LDHP ++KL+++ E D++SF V E G +L + + K +E +A I+ QV S
Sbjct: 75 LKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSG 133
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
+ Y++ K ++H DLKP NILL +IKI DFGLS + D
Sbjct: 134 ITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR-------- 183
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATILEENTI 523
GT +Y+ PE K DVWS GVI Y L G PF G N E I
Sbjct: 184 IGTAYYIAPEVL-----RGTYDEKCDVWSAGVILYILLSGTPPFYGKN--------EYDI 230
Query: 524 LKATEV-----QFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
LK E T+S++AK IR L + RI H ++Q
Sbjct: 231 LKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 132/296 (44%), Gaps = 40/296 (13%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHAL 339
+ SDRY +LGKG F EV D + A KV Q+ + K DK++ L
Sbjct: 45 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ--KTDKES-----LL 97
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE + K LDHP ++KLY+ FE D F V E G +L + K +E +A I+
Sbjct: 98 REVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR 156
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+S + Y++ K ++H DLKP N+LL + I+I DFGLS + D
Sbjct: 157 QVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--- 211
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATIL 518
GT +Y+ PE K DVWS GVI Y L G PF G N
Sbjct: 212 -----IGTAYYIAPEVL-----HGTYDEKCDVWSTGVILYILLSGCPPFNGAN------- 254
Query: 519 EENTILKATE-----VQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
E ILK E + VS AK IR L Y RI H+++Q
Sbjct: 255 -EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 309
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 132/296 (44%), Gaps = 40/296 (13%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHAL 339
+ SDRY +LGKG F EV D + A KV Q+ + K DK++ L
Sbjct: 46 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ--KTDKES-----LL 98
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE + K LDHP ++KLY+ FE D F V E G +L + K +E +A I+
Sbjct: 99 REVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR 157
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+S + Y++ K ++H DLKP N+LL + I+I DFGLS + D
Sbjct: 158 QVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--- 212
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATIL 518
GT +Y+ PE K DVWS GVI Y L G PF G N
Sbjct: 213 -----IGTAYYIAPEVL-----HGTYDEKCDVWSTGVILYILLSGCPPFNGAN------- 255
Query: 519 EENTILKATE-----VQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
E ILK E + VS AK IR L Y RI H+++Q
Sbjct: 256 -EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 310
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 132/296 (44%), Gaps = 40/296 (13%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHAL 339
+ SDRY +LGKG F EV D + A KV Q+ + K DK++ L
Sbjct: 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ--KTDKES-----LL 74
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE + K LDHP ++KLY+ FE D F V E G +L + K +E +A I+
Sbjct: 75 REVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR 133
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+S + Y++ K ++H DLKP N+LL + I+I DFGLS + D
Sbjct: 134 QVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--- 188
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATIL 518
GT +Y+ PE K DVWS GVI Y L G PF G N
Sbjct: 189 -----IGTAYYIAPEVL-----HGTYDEKCDVWSTGVILYILLSGCPPFNGAN------- 231
Query: 519 EENTILKATE-----VQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
E ILK E + VS AK IR L Y RI H+++Q
Sbjct: 232 -EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 286
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 132/295 (44%), Gaps = 40/295 (13%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHALR 340
+ SDRY +LGKG F EV D + A KV Q+ + K DK++ LR
Sbjct: 29 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ--KTDKES-----LLR 81
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E + K LDHP ++KLY+ FE D F V E G +L + K +E +A I+ Q
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ 140
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
V+S + Y++ K ++H DLKP N+LL + I+I DFGLS + D
Sbjct: 141 VLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---- 194
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATILE 519
GT +Y+ PE K DVWS GVI Y L G PF G N
Sbjct: 195 ----IGTAYYIAPEVL-----HGTYDEKCDVWSTGVILYILLSGCPPFNGAN-------- 237
Query: 520 ENTILKATE-----VQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
E ILK E + VS AK IR L Y RI H+++Q
Sbjct: 238 EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 292
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 130/296 (43%), Gaps = 40/296 (13%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHAL 339
+ SDRY +LGKG F EV D + A KV Q+ + K DK++ L
Sbjct: 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ--KTDKES-----LL 74
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE + K LDHP + KLY+ FE D F V E G +L + K +E +A I+
Sbjct: 75 REVQLLKQLDHPNIXKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR 133
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+S + Y + K ++H DLKP N+LL + I+I DFGLS + D
Sbjct: 134 QVLSGITYXH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK--- 188
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATIL 518
GT +Y+ PE K DVWS GVI Y L G PF G N
Sbjct: 189 -----IGTAYYIAPEVL-----HGTYDEKCDVWSTGVILYILLSGCPPFNGAN------- 231
Query: 519 EENTILKATE-----VQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
E ILK E + VS AK IR L Y RI H+++Q
Sbjct: 232 -EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQ 286
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 136/279 (48%), Gaps = 34/279 (12%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
LLGKG F+ V++A + VA K+ D K KA ++ E IH L HP +
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKM----IDKKAMYKAGMVQRVQNEVKIHCQLKHPSI 73
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH-KTIAEREARSIVMQVVSALKYLNEIK 412
++LY+ FE D+N VLE C +++ YLK K +E EAR + Q+++ + YL+
Sbjct: 74 LELYNYFE-DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS-- 130
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLS---KVMDEENYNPDHGMDLTSQGAGTYW 469
++H DL N+LLT IKI DFGL+ K+ E++Y GT
Sbjct: 131 HGILHRDLTLSNLLLTRNM---NIKIADFGLATQLKMPHEKHYTL----------CGTPN 177
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEV 529
Y+ PE + ++ + S DVWS+G +FY L G+ PF + + NT+ K
Sbjct: 178 YISPE--IATRSAHGLES--DVWSLGCMFYTLLIGRPPFDTDTVK------NTLNKVVLA 227
Query: 530 QFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
+ +S EAK I L DR+ + S+ H ++
Sbjct: 228 DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 15/286 (5%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK-DWKEDKKANYIKHALREYN 343
L D Y++ LG G EV AF+ K + VA K+ K ++A+ + E
Sbjct: 14 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 73
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
I K L+HP ++K+ + F DA + VLE +G +L + +K + E + Q++
Sbjct: 74 ILKKLNHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 131
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
A++YL+E +IH DLKP N+LL+ IKITDFG SK++ E + L
Sbjct: 132 AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--------LMRT 181
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
GT YL PE +V + VD WS+GVI + CL G PF +++Q ++ ++ T
Sbjct: 182 LCGTPTYLAPE-VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 240
Query: 524 LKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
K + VS +A ++ L + R RH +LQ
Sbjct: 241 GKYNFIP-EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 15/286 (5%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK-DWKEDKKANYIKHALREYN 343
L D Y++ LG G EV AF+ K + VA K+ K ++A+ + E
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
I K L+HP ++K+ + F DA + VLE +G +L + +K + E + Q++
Sbjct: 68 ILKKLNHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
A++YL+E +IH DLKP N+LL+ IKITDFG SK++ E + L
Sbjct: 126 AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--------LMRT 175
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
GT YL PE +V + VD WS+GVI + CL G PF +++Q ++ ++ T
Sbjct: 176 LCGTPTYLAPE-VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 524 LKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
K + VS +A ++ L + R RH +LQ
Sbjct: 235 GKYNFIP-EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 15/286 (5%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK-DWKEDKKANYIKHALREYN 343
L D Y++ LG G EV AF+ K + VA K+ K ++A+ + E
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
I K L+HP ++K+ + F DA + VLE +G +L + +K + E + Q++
Sbjct: 68 ILKKLNHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
A++YL+E +IH DLKP N+LL+ IKITDFG SK++ E + L
Sbjct: 126 AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--------LMRT 175
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
GT YL PE +V + VD WS+GVI + CL G PF +++Q ++ ++ T
Sbjct: 176 LCGTPTYLAPE-VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 524 LKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
K + VS +A ++ L + R RH +LQ
Sbjct: 235 GKYNFIP-EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 15/286 (5%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK-DWKEDKKANYIKHALREYN 343
L D Y++ LG G EV AF+ K + VA K+ K ++A+ + E
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
I K L+HP ++K+ + F DA + VLE +G +L + +K + E + Q++
Sbjct: 68 ILKKLNHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
A++YL+E +IH DLKP N+LL+ IKITDFG SK++ E + L
Sbjct: 126 AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--------LMRT 175
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
GT YL PE +V + VD WS+GVI + CL G PF +++Q ++ ++ T
Sbjct: 176 LCGTPTYLAPE-VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 524 LKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
K + VS +A ++ L + R RH +LQ
Sbjct: 235 GKYNFIP-EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 15/286 (5%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK-DWKEDKKANYIKHALREYN 343
L D Y++ LG G EV AF+ K + VA K+ K ++A+ + E
Sbjct: 7 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 66
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
I K L+HP ++K+ + F DA + VLE +G +L + +K + E + Q++
Sbjct: 67 ILKKLNHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
A++YL+E +IH DLKP N+LL+ IKITDFG SK++ E + L
Sbjct: 125 AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--------LMRT 174
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
GT YL PE +V + VD WS+GVI + CL G PF +++Q ++ ++ T
Sbjct: 175 LCGTPTYLAPE-VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 233
Query: 524 LKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
K + VS +A ++ L + R RH +LQ
Sbjct: 234 GKYNFIP-EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 128/278 (46%), Gaps = 34/278 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHALRE 341
+ + Y + LG G + EV + A KV Q +K D N K
Sbjct: 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEI 93
Query: 342 YN---IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
YN + K+LDHP ++KL+DVFE D F V E+ +G +L + E +A +I+
Sbjct: 94 YNEISLLKSLDHPNIIKLFDVFE-DKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIM 152
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGM 458
Q++S + YL+ K ++H D+KP NILL N IKI DFGLS ++ D+ +
Sbjct: 153 KQILSGICYLH--KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF-----FSKDYKL 205
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
GT +Y+ PE K + K DVWS GVI Y L G PFG Q
Sbjct: 206 ---RDRLGTAYYIAPEVL-----KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ---- 253
Query: 519 EENTILKATE-----VQFANKPTVSNEAKGFIRSCLAY 551
I+K E F + +S+EAK I+ L Y
Sbjct: 254 ---DIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTY 288
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 114/229 (49%), Gaps = 24/229 (10%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
LSDRY L +LG GG SEVH A DL++ R VA KV L D D ++ RE
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKV--LRADLARDP--SFYLRFRREAQN 65
Query: 345 HKALDHPRVVKLYDVFEIDANSF---CTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQV 401
AL+HP +V +YD E + + V+EY DG L + + + A ++
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 402 VSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLT 461
AL + ++ +IH D+KP NI+++ N +K+ DFG+++ + D G +T
Sbjct: 126 CQALNFSHQNG--IIHRDVKPANIMISATNA---VKVMDFGIARAI------ADSGNSVT 174
Query: 462 SQGA--GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
A GT YL PE + ++ DV+S+G + Y+ L G+ PF
Sbjct: 175 QTAAVIGTAQYLSPE----QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 114/229 (49%), Gaps = 24/229 (10%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
LSDRY L +LG GG SEVH A DL++ R VA KV L D D ++ RE
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKV--LRADLARDP--SFYLRFRREAQN 65
Query: 345 HKALDHPRVVKLYDVFEIDANSF---CTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQV 401
AL+HP +V +YD E + + V+EY DG L + + + A ++
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 402 VSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLT 461
AL + ++ +IH D+KP NI+++ N +K+ DFG+++ + D G +T
Sbjct: 126 CQALNFSHQNG--IIHRDVKPANIMISATNA---VKVMDFGIARAI------ADSGNSVT 174
Query: 462 SQGA--GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
A GT YL PE + ++ DV+S+G + Y+ L G+ PF
Sbjct: 175 QTAAVIGTAQYLSPE----QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 114/227 (50%), Gaps = 20/227 (8%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
LSDRY L +LG GG SEVH A DL++ R VA KV L D D ++ RE
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKV--LRADLARDP--SFYLRFRREAQN 65
Query: 345 HKALDHPRVVKLYDVFEIDANSF---CTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQV 401
AL+HP +V +YD E + + V+EY DG L + + + A ++
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 402 VSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLT 461
AL + ++ +IH D+KP NIL++ N +K+ DFG+++ + + + + T
Sbjct: 126 CQALNFSHQNG--IIHRDVKPANILISATNA---VKVVDFGIARAIADSG----NSVXQT 176
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ GT YL PE + ++ DV+S+G + Y+ L G+ PF
Sbjct: 177 AAVIGTAQYLSPE----QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 143/297 (48%), Gaps = 17/297 (5%)
Query: 274 EDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK-DWKEDKKA 332
+DQS + L D Y++ LG G EV AF+ K + VA ++ K ++A
Sbjct: 124 DDQSVYPK--ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREA 181
Query: 333 NYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER 392
+ + E I K L+HP ++K+ + F DA + VLE +G +L + +K + E
Sbjct: 182 DPALNVETEIEILKKLNHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKEA 239
Query: 393 EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENY 452
+ Q++ A++YL+E +IH DLKP N+LL+ IKITDFG SK++ E +
Sbjct: 240 TCKLYFYQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS- 296
Query: 453 NPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
L GT YL PE +V + VD WS+GVI + CL G PF ++
Sbjct: 297 -------LMRTLCGTPTYLAPE-VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348
Query: 513 SQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+Q ++ ++ T K + VS +A ++ L + R RH +LQ
Sbjct: 349 TQVSLKDQITSGKYNFIP-EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 143/297 (48%), Gaps = 17/297 (5%)
Query: 274 EDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK-DWKEDKKA 332
+DQS + L D Y++ LG G EV AF+ K + VA ++ K ++A
Sbjct: 138 DDQSVYPK--ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREA 195
Query: 333 NYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER 392
+ + E I K L+HP ++K+ + F DA + VLE +G +L + +K + E
Sbjct: 196 DPALNVETEIEILKKLNHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKEA 253
Query: 393 EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENY 452
+ Q++ A++YL+E +IH DLKP N+LL+ IKITDFG SK++ E +
Sbjct: 254 TCKLYFYQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS- 310
Query: 453 NPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
L GT YL PE +V + VD WS+GVI + CL G PF ++
Sbjct: 311 -------LMRTLCGTPTYLAPE-VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 362
Query: 513 SQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+Q ++ ++ T K + VS +A ++ L + R RH +LQ
Sbjct: 363 TQVSLKDQITSGKYNFIP-EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 113/229 (49%), Gaps = 24/229 (10%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
LSDRY L +LG GG SEVH A DL+ R VA KV L D D ++ RE
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKV--LRADLARDP--SFYLRFRREAQN 65
Query: 345 HKALDHPRVVKLYDVFEIDANSF---CTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQV 401
AL+HP +V +YD E + + V+EY DG L + + + A ++
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 402 VSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLT 461
AL + ++ +IH D+KP NI+++ N +K+ DFG+++ + D G +T
Sbjct: 126 CQALNFSHQNG--IIHRDVKPANIMISATNA---VKVMDFGIARAI------ADSGNSVT 174
Query: 462 SQGA--GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
A GT YL PE + ++ DV+S+G + Y+ L G+ PF
Sbjct: 175 QTAAVIGTAQYLSPE----QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 150/295 (50%), Gaps = 31/295 (10%)
Query: 278 RFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACK-VHQLNKDWKEDKKANYIK 336
R+ + D Y +LG G FSEV A D + Q+ VA K + + + KE N I
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIA 68
Query: 337 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARS 396
+HK + HP +V L D++E + + +++ G +L + + ER+A
Sbjct: 69 ------VLHK-IKHPNIVALDDIYESGGHLYL-IMQLVSGGELFDRIVEKGFYTERDASR 120
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
++ QV+ A+KYL+++ ++H DLKP N+L + +I I+DFGLSK+ D +
Sbjct: 121 LIFQVLDAVKYLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS----- 173
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQAT 516
+ S GT Y+ PE V+ + P S VD WS+GVI Y L G PF ++++ A
Sbjct: 174 ---VLSTACGTPGYVAPE--VLAQKP--YSKAVDCWSIGVIAYILLCGYPPF-YDENDAK 225
Query: 517 ILEENTILKATEVQFANKP---TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
+ E+ ILKA E +F + P +S+ AK FIR + E R +H ++
Sbjct: 226 LFEQ--ILKA-EYEF-DSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 113/229 (49%), Gaps = 24/229 (10%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
LSDRY L +LG GG SEVH A DL+ R VA KV L D D ++ RE
Sbjct: 27 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKV--LRADLARDP--SFYLRFRREAQN 82
Query: 345 HKALDHPRVVKLYDVFEIDANSF---CTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQV 401
AL+HP +V +YD E + + V+EY DG L + + + A ++
Sbjct: 83 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 142
Query: 402 VSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLT 461
AL + ++ +IH D+KP NI+++ N +K+ DFG+++ + D G +T
Sbjct: 143 CQALNFSHQNG--IIHRDVKPANIMISATNA---VKVMDFGIARAI------ADSGNSVT 191
Query: 462 SQGA--GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
A GT YL PE + ++ DV+S+G + Y+ L G+ PF
Sbjct: 192 QTAAVIGTAQYLSPE----QARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 147/291 (50%), Gaps = 33/291 (11%)
Query: 280 NNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHAL 339
N H SD + L ++GKG F +V A E+ + A KV Q K+ ++ KH +
Sbjct: 32 NPHAKPSD-FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEE----KHIM 86
Query: 340 REYNIH-KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
E N+ K + HP +V L+ F+ A+ VL+Y +G +L ++L++ + E AR
Sbjct: 87 SERNVLLKNVKHPFLVGLHFSFQT-ADKLYFVLDYINGGELFYHLQRERCFLEPRARFYA 145
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGM 458
++ SAL YL+ + +++ DLKP NILL G I +TDFGL K E N
Sbjct: 146 AEIASALGYLHSLN--IVYRDLKPENILLDSQ---GHIVLTDFGLCKENIEHN------- 193
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
TS GT YL PE V+ K P VD W +G + Y+ LYG PF ++++ A +
Sbjct: 194 STTSTFCGTPEYLAPE--VLHKQP--YDRTVDWWCLGAVLYEMLYGLPPF-YSRNTAEMY 248
Query: 519 EENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+N + K ++ KP ++N A+ + L + R+ A+ D+++
Sbjct: 249 -DNILNKPLQL----KPNITNSARHLLEGLLQKDRTKRLG----AKDDFME 290
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 149/294 (50%), Gaps = 29/294 (9%)
Query: 278 RFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKH 337
R+ + D Y +LG G FSEV A D + Q+ VA K + K+ E K+ +
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKC--IAKEALEGKEGS---- 62
Query: 338 ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSI 397
E + + HP +V L D++E + + +++ G +L + + ER+A +
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLY-LIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ QV+ A+KYL+++ ++H DLKP N+L + +I I+DFGLSK+ D +
Sbjct: 122 IFQVLDAVKYLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS------ 173
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATI 517
+ S GT Y+ PE V+ + P S VD WS+GVI Y L G PF ++++ A +
Sbjct: 174 --VLSTACGTPGYVAPE--VLAQKP--YSKAVDCWSIGVIAYILLCGYPPF-YDENDAKL 226
Query: 518 LEENTILKATEVQFANKP---TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
E+ ILKA E +F + P +S+ AK FIR + E R +H ++
Sbjct: 227 FEQ--ILKA-EYEF-DSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 149/294 (50%), Gaps = 29/294 (9%)
Query: 278 RFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKH 337
R+ + D Y +LG G FSEV A D + Q+ VA K + K+ E K+ +
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKC--IAKEALEGKEGS---- 62
Query: 338 ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSI 397
E + + HP +V L D++E + + +++ G +L + + ER+A +
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLY-LIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ QV+ A+KYL+++ ++H DLKP N+L + +I I+DFGLSK+ D +
Sbjct: 122 IFQVLDAVKYLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS------ 173
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATI 517
+ S GT Y+ PE V+ + P S VD WS+GVI Y L G PF ++++ A +
Sbjct: 174 --VLSTACGTPGYVAPE--VLAQKP--YSKAVDCWSIGVIAYILLCGYPPF-YDENDAKL 226
Query: 518 LEENTILKATEVQFANKP---TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
E+ ILKA E +F + P +S+ AK FIR + E R +H ++
Sbjct: 227 FEQ--ILKA-EYEF-DSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 149/294 (50%), Gaps = 29/294 (9%)
Query: 278 RFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKH 337
R+ + D Y +LG G FSEV A D + Q+ VA K + K+ E K+ +
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKC--IAKEALEGKEGS---- 62
Query: 338 ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSI 397
E + + HP +V L D++E + + +++ G +L + + ER+A +
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLY-LIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ QV+ A+KYL+++ ++H DLKP N+L + +I I+DFGLSK+ D +
Sbjct: 122 IFQVLDAVKYLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS------ 173
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATI 517
+ S GT Y+ PE V+ + P S VD WS+GVI Y L G PF ++++ A +
Sbjct: 174 --VLSTACGTPGYVAPE--VLAQKP--YSKAVDCWSIGVIAYILLCGYPPF-YDENDAKL 226
Query: 518 LEENTILKATEVQFANKP---TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
E+ ILKA E +F + P +S+ AK FIR + E R +H ++
Sbjct: 227 FEQ--ILKA-EYEF-DSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 112/229 (48%), Gaps = 24/229 (10%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
LSDRY L +LG GG SEVH A DL+ R VA KV L D D ++ RE
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKV--LRADLARDP--SFYLRFRREAQN 65
Query: 345 HKALDHPRVVKLYDVFEIDANSF---CTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQV 401
AL+HP +V +Y E + + V+EY DG L + + + A ++
Sbjct: 66 AAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 402 VSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLT 461
AL + ++ +IH D+KP NI+++ N +K+ DFG+++ + D G +T
Sbjct: 126 CQALNFSHQNG--IIHRDVKPANIMISATNA---VKVMDFGIARAI------ADSGNSVT 174
Query: 462 SQGA--GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
A GT YL PE + ++ DV+S+G + Y+ L G+ PF
Sbjct: 175 QTAAVIGTAQYLSPE----QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 120/232 (51%), Gaps = 18/232 (7%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I + + HP ++ L+DV+E + +LE G +L +L Q ++++E EA S +
Sbjct: 64 REVSILRQVLHPNIITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNV-CGEIKITDFGLSKVMDEENYNPDHGM 458
Q++ + YL+ K + H+DLKP NI+L + N+ IK+ DFGL+ + + G+
Sbjct: 123 QILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-------HEIEDGV 173
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
+ + GT ++ PE +V P + + D+WS+GVI Y L G PF + Q T+
Sbjct: 174 EFKNI-FGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 519 EENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQP 570
+ + +F ++ S AK FIR L R+ + RH ++ P
Sbjct: 229 NITAVSYDFDEEFFSQ--TSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 130/294 (44%), Gaps = 31/294 (10%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA----LR 340
LS+ Y + LG G + EV D KV + + K +K + + L
Sbjct: 35 LSEMYQRVKKLGSGAYGEVLLCRD---------KVTHVERAIKIIRKTSVSTSSNSKLLE 85
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E + K LDHP ++KLYD FE D ++ V+E G +L + E +A I+ Q
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFE-DKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQ 144
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
V+S + YL+ K ++H DLKP N+LL IKI DFGLS V + + +
Sbjct: 145 VLSGVTYLH--KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER---- 198
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
GT +Y+ PE K K DVWS+GVI + L G PFG Q+ IL +
Sbjct: 199 ----LGTAYYIAPEVL-----RKKYDEKCDVWSIGVILFILLAGYPPFG-GQTDQEILRK 248
Query: 521 NTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPK 574
K T VS AK I+ L + + RI H +++ K
Sbjct: 249 VEKGKYT-FDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSK 301
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 142/287 (49%), Gaps = 28/287 (9%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
Y ++ LG+G F +V A+ + VA K+ +NK K K++ RE + + L
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKI--INK--KVLAKSDMQGRIEREISYLRLL 71
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYL 408
HP ++KLYDV + + V+EY G++L Y+ Q ++E+EAR Q++SA++Y
Sbjct: 72 RHPHIIKLYDVIK-SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 129
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+ K ++H DLKP N+LL E +KI DFGLS +M + N+ G+
Sbjct: 130 HRHK--IVHRDLKPENLLLDEHL---NVKIADFGLSNIMTDGNF--------LKTSCGSP 176
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATE 528
Y PE + GK +VDVWS GVI Y L + PF + +L +N +
Sbjct: 177 NYAAPEV-ISGK--LYAGPEVDVWSCGVILYVMLCRRLPF--DDESIPVLFKNI----SN 227
Query: 529 VQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
+ +S A G I+ L +RI + + + D+ + +P++
Sbjct: 228 GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEY 274
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 142/287 (49%), Gaps = 28/287 (9%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
Y ++ LG+G F +V A+ + VA K+ +NK K K++ RE + + L
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKI--INK--KVLAKSDMQGRIEREISYLRLL 70
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYL 408
HP ++KLYDV + + V+EY G++L Y+ Q ++E+EAR Q++SA++Y
Sbjct: 71 RHPHIIKLYDVIK-SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 128
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+ K ++H DLKP N+LL E +KI DFGLS +M + N+ G+
Sbjct: 129 HRHK--IVHRDLKPENLLLDEHL---NVKIADFGLSNIMTDGNF--------LKTSCGSP 175
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATE 528
Y PE + GK +VDVWS GVI Y L + PF + +L +N +
Sbjct: 176 NYAAPEV-ISGK--LYAGPEVDVWSCGVILYVMLCRRLPF--DDESIPVLFKNI----SN 226
Query: 529 VQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
+ +S A G I+ L +RI + + + D+ + +P++
Sbjct: 227 GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEY 273
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 133/294 (45%), Gaps = 42/294 (14%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA-----L 339
LSDRY + LG G + EV D K+ + K KK++ + L
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKD---------KLTGAERAIKIIKKSSVTTTSNSGALL 52
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
E + K LDHP ++KLY+ FE D ++ V+E G +L + + +E +A I+
Sbjct: 53 DEVAVLKQLDHPNIMKLYEFFE-DKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 111
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+S YL+ K ++H DLKP N+LL + IKI DFGLS ++ M
Sbjct: 112 QVLSGTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA-----HFEVGGKM- 163
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT +Y+ PE K K DVWS GVI Y L G PFG Q
Sbjct: 164 --KERLGTAYYIAPEVL-----RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQE---- 212
Query: 520 ENTILKATEV-QFANKP----TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
ILK E +F+ P VS+EAK ++ L Y RI H ++
Sbjct: 213 ---ILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 142/287 (49%), Gaps = 28/287 (9%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
Y ++ LG+G F +V A+ + VA K+ +NK K K++ RE + + L
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKI--INK--KVLAKSDMQGRIEREISYLRLL 61
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYL 408
HP ++KLYDV + + V+EY G++L Y+ Q ++E+EAR Q++SA++Y
Sbjct: 62 RHPHIIKLYDVIK-SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 119
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+ K ++H DLKP N+LL E +KI DFGLS +M + N+ G+
Sbjct: 120 HRHK--IVHRDLKPENLLLDEHL---NVKIADFGLSNIMTDGNF--------LKTSCGSP 166
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATE 528
Y PE + GK +VDVWS GVI Y L + PF + +L +N +
Sbjct: 167 NYAAPEV-ISGK--LYAGPEVDVWSCGVILYVMLCRRLPF--DDESIPVLFKNI----SN 217
Query: 529 VQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
+ +S A G I+ L +RI + + + D+ + +P++
Sbjct: 218 GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEY 264
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 142/287 (49%), Gaps = 28/287 (9%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
Y ++ LG+G F +V A+ + VA K+ +NK K K++ RE + + L
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKI--INK--KVLAKSDMQGRIEREISYLRLL 65
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYL 408
HP ++KLYDV + + V+EY G++L Y+ Q ++E+EAR Q++SA++Y
Sbjct: 66 RHPHIIKLYDVIK-SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 123
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+ K ++H DLKP N+LL E +KI DFGLS +M + N+ G+
Sbjct: 124 HRHK--IVHRDLKPENLLLDEHL---NVKIADFGLSNIMTDGNF--------LKTSCGSP 170
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATE 528
Y PE + GK +VDVWS GVI Y L + PF + +L +N +
Sbjct: 171 NYAAPEV-ISGK--LYAGPEVDVWSCGVILYVMLCRRLPF--DDESIPVLFKNI----SN 221
Query: 529 VQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
+ +S A G I+ L +RI + + + D+ + +P++
Sbjct: 222 GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEY 268
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 124/261 (47%), Gaps = 32/261 (12%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHALREYNIH 345
Y LL +GKG F++V A + R VA K+ QLN ++ RE I
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN--------PTSLQKLFREVRIM 65
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
K L+HP +VKL++V E + + ++EY G ++ YL H + E+EARS Q+VSA+
Sbjct: 66 KILNHPNIVKLFEVIETEKTLYL-IMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAV 124
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
+Y ++ + ++H DLK N+LL + IKI DFG S + +D
Sbjct: 125 QYCHQKR--IVHRDLKAENLLL---DADMNIKIADFGFSN-----EFTVGGKLDTF---C 171
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATILEENTIL 524
G+ Y PE F + +VDVWS+GVI Y + G PF G N + L E +
Sbjct: 172 GSPPYAAPELF---QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE---LRERVLR 225
Query: 525 KATEVQFANKPTVSNEAKGFI 545
+ F N K F+
Sbjct: 226 GKYRIPFYMSTDCENLLKRFL 246
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 139/321 (43%), Gaps = 57/321 (17%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
L RY+ L LG GG V A D + VA K K D ++ +KHALRE I
Sbjct: 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIK-----KIVLTDPQS--VKHALREIKI 61
Query: 345 HKALDHPRVVKLYDVFE-------------IDANSFCTVLEYCDGHDLDFYLKQHKTIAE 391
+ LDH +VK++++ + NS V EY + DL L+Q + E
Sbjct: 62 IRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQ-GPLLE 119
Query: 392 REARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEEN 451
AR + Q++ LKY++ V+H DLKP N+ + ++ +KI DFGL+++MD
Sbjct: 120 EHARLFMYQLLRGLKYIHSAN--VLHRDLKPANLFINTEDLV--LKIGDFGLARIMDPHY 175
Query: 452 YNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF--G 509
+ H S+G T WY P + +P + +D+W+ G IF + L GK F
Sbjct: 176 SHKGH----LSEGLVTKWYRSPRLLL---SPNNYTKAIDMWAAGCIFAEMLTGKTLFAGA 228
Query: 510 HNQSQATILEENT----------ILKATEVQFANK------------PTVSNEAKGFIRS 547
H Q ++ E+ +L V N P +S EA F+
Sbjct: 229 HELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQ 288
Query: 548 CLAYRKEDRIDVISLARHDYL 568
L + DR+ H Y+
Sbjct: 289 ILTFSPMDRLTAEEALSHPYM 309
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 133/294 (45%), Gaps = 42/294 (14%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA-----L 339
LSDRY + LG G + EV D K+ + K KK++ + L
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKD---------KLTGAERAIKIIKKSSVTTTSNSGALL 69
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
E + K LDHP ++KLY+ FE D ++ V+E G +L + + +E +A I+
Sbjct: 70 DEVAVLKQLDHPNIMKLYEFFE-DKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 128
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+S YL+ K ++H DLKP N+LL + IKI DFGLS ++ M
Sbjct: 129 QVLSGTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA-----HFEVGGKM- 180
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT +Y+ PE K K DVWS GVI Y L G PFG Q
Sbjct: 181 --KERLGTAYYIAPEVL-----RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQE---- 229
Query: 520 ENTILKATEV-QFANKP----TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
ILK E +F+ P VS+EAK ++ L Y RI H ++
Sbjct: 230 ---ILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 123/261 (47%), Gaps = 32/261 (12%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHALREYNIH 345
Y LL +GKG F++V A + R VA K+ QLN ++ RE I
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN--------PTSLQKLFREVRIM 68
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
K L+HP +VKL++V E + + ++EY G ++ YL H + E+EARS Q+VSA+
Sbjct: 69 KILNHPNIVKLFEVIETEKTLYL-IMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAV 127
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
+Y ++ + ++H DLK N+LL + IKI DFG S + +D
Sbjct: 128 QYCHQKR--IVHRDLKAENLLL---DADMNIKIADFGFSN-----EFTVGGKLDAF---C 174
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATILEENTIL 524
G Y PE F + +VDVWS+GVI Y + G PF G N + L E +
Sbjct: 175 GAPPYAAPELF---QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE---LRERVLR 228
Query: 525 KATEVQFANKPTVSNEAKGFI 545
+ F N K F+
Sbjct: 229 GKYRIPFYMSTDCENLLKRFL 249
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 118/228 (51%), Gaps = 26/228 (11%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
+ D ++ LG G F +VH L E+R + + ++ K +D+ ++ E +
Sbjct: 20 IDDLFIFKRKLGSGAFGDVH----LVEER--SSGLERVIKTINKDRSQVPMEQIEAEIEV 73
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL----KQHKTIAEREARSIVMQ 400
K+LDHP ++K+++VFE D ++ V+E C+G +L + + K ++E ++ Q
Sbjct: 74 LKSLDHPNIIKIFEVFE-DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQ 132
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++AL Y + V+H DLKP NIL + + IKI DFGL+++ + +
Sbjct: 133 MMNALAYFH--SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH-------- 182
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ AGT Y+ PE F ++ K D+WS GV+ Y L G PF
Sbjct: 183 STNAAGTALYMAPEVF-----KRDVTFKCDIWSAGVVMYFLLTGCLPF 225
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 126/261 (48%), Gaps = 32/261 (12%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHALREYNIH 345
Y LL +GKG F++V A + + VA K+ QLN ++ ++ RE I
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN--------SSSLQKLFREVRIM 67
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
K L+HP +VKL++V E + + V+EY G ++ YL H + E+EAR+ Q+VSA+
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
+Y ++ ++H DLK N+LL + IKI DFG S + + +D
Sbjct: 127 QYCHQ--KFIVHRDLKAENLLL---DADMNIKIADFGFSN-----EFTFGNKLDTF---C 173
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATILEENTIL 524
G+ Y PE F K +VDVWS+GVI Y + G PF G N + L E +
Sbjct: 174 GSPPYAAPELFQGKKYD---GPEVDVWSLGVILYTLVSGSLPFDGQNLKE---LRERVLR 227
Query: 525 KATEVQFANKPTVSNEAKGFI 545
+ F N K F+
Sbjct: 228 GKYRIPFYMSTDCENLLKKFL 248
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 126/261 (48%), Gaps = 32/261 (12%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHALREYNIH 345
Y LL +GKG F++V A + + VA K+ QLN ++ ++ RE I
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN--------SSSLQKLFREVRIM 67
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
K L+HP +VKL++V E + + V+EY G ++ YL H + E+EAR+ Q+VSA+
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
+Y ++ ++H DLK N+LL + IKI DFG S + + +D
Sbjct: 127 QYCHQ--KFIVHRDLKAENLLL---DADMNIKIADFGFS-----NEFTFGNKLDTF---C 173
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATILEENTIL 524
G+ Y PE F K +VDVWS+GVI Y + G PF G N + L E +
Sbjct: 174 GSPPYAAPELFQGKKYD---GPEVDVWSLGVILYTLVSGSLPFDGQNLKE---LRERVLR 227
Query: 525 KATEVQFANKPTVSNEAKGFI 545
+ F N K F+
Sbjct: 228 GKYRIPFYMSTDCENLLKKFL 248
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 127/261 (48%), Gaps = 32/261 (12%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHALREYNIH 345
Y LL +GKG F++V A + + VA ++ QLN ++ ++ RE I
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLN--------SSSLQKLFREVRIM 67
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
K L+HP +VKL++V E + + V+EY G ++ YL H + E+EAR+ Q+VSA+
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
+Y ++ ++H DLK N+LL + IKI DFG S + + +D +
Sbjct: 127 QYCHQ--KFIVHRDLKAENLLL---DADMNIKIADFGFSN-----EFTFGNKLD---EFC 173
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATILEENTIL 524
G+ Y PE F K +VDVWS+GVI Y + G PF G N + L E +
Sbjct: 174 GSPPYAAPELFQGKKYD---GPEVDVWSLGVILYTLVSGSLPFDGQNLKE---LRERVLR 227
Query: 525 KATEVQFANKPTVSNEAKGFI 545
+ F N K F+
Sbjct: 228 GKYRIPFYMSTDCENLLKKFL 248
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 127/291 (43%), Gaps = 32/291 (10%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKV--HQLNKDWKEDKKANYIKHALREYNIHK 346
Y++ LG+G F +V A K Q+ VA K QL K K++ RE + K
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLK------KSDMHMRVEREISYLK 64
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
L HP ++KLYDV + V+EY G D Y+ + K + E E R Q++ A++
Sbjct: 65 LLRHPHIIKLYDVITTPTD-IVMVIEYAGGELFD-YIVEKKRMTEDEGRRFFQQIICAIE 122
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
Y + K ++H DLKP N+LL + +KI DFGLS +M + N+ G
Sbjct: 123 YCHRHK--IVHRDLKPENLLLDDNL---NVKIADFGLSNIMTDGNF--------LKTSCG 169
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKA 526
+ Y PE V +VDVWS G++ Y L G+ PF N K
Sbjct: 170 SPNYAAPE---VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE------FIPNLFKKV 220
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKHGR 577
+ +S A+ IR + RI + + R + +P + R
Sbjct: 221 NSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLR 271
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 121/244 (49%), Gaps = 32/244 (13%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHAL 339
P RY+ LGKGGF++ ++ D+ + A KV L K +++K +
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST------ 91
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
E IHK+LD+P VV + FE D + VLE C L K+ K + E EAR +
Sbjct: 92 -EIAIHKSLDNPHVVGFHGFFE-DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 149
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q + ++YL+ + VIH DLK GN+ L + ++KI DFGL+ ++ ++ + D
Sbjct: 150 QTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM---DVKIGDFGLATKIE---FDGERKKD 201
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
L GT Y+ PE + S +VD+WS+G I Y L GK PF + + L+
Sbjct: 202 L----CGTPNYIAPEVLCKKGH----SFEVDIWSLGCILYTLLVGKPPF-----ETSCLK 248
Query: 520 ENTI 523
E I
Sbjct: 249 ETYI 252
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 125/261 (47%), Gaps = 32/261 (12%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHALREYNIH 345
Y LL +GKG F++V A + + VA K+ QLN ++ ++ RE I
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN--------SSSLQKLFREVRIM 67
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
K L+HP +VKL++V E + + V+EY G ++ YL H + E+EAR+ Q+VSA+
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
+Y ++ ++H DLK N+LL + IKI DFG S + + +D
Sbjct: 127 QYCHQ--KFIVHRDLKAENLLL---DADMNIKIADFGFSN-----EFTFGNKLD---AFC 173
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATILEENTIL 524
G Y PE F + +VDVWS+GVI Y + G PF G N + L E +
Sbjct: 174 GAPPYAAPELF---QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE---LRERVLR 227
Query: 525 KATEVQFANKPTVSNEAKGFI 545
+ F N K F+
Sbjct: 228 GKYRIPFYMSTDCENLLKKFL 248
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 126/261 (48%), Gaps = 32/261 (12%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHALREYNIH 345
Y LL +GKG F++V A + + VA ++ QLN ++ ++ RE I
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLN--------SSSLQKLFREVRIM 67
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
K L+HP +VKL++V E + + V+EY G ++ YL H + E+EAR+ Q+VSA+
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
+Y ++ ++H DLK N+LL + IKI DFG S + + +D
Sbjct: 127 QYCHQ--KFIVHRDLKAENLLL---DADMNIKIADFGFSN-----EFTFGNKLDTF---C 173
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATILEENTIL 524
G+ Y PE F K +VDVWS+GVI Y + G PF G N + L E +
Sbjct: 174 GSPPYAAPELFQGKKYD---GPEVDVWSLGVILYTLVSGSLPFDGQNLKE---LRERVLR 227
Query: 525 KATEVQFANKPTVSNEAKGFI 545
+ F N K F+
Sbjct: 228 GKYRIPFYMSTDCENLLKKFL 248
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 121/244 (49%), Gaps = 32/244 (13%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHAL 339
P RY+ LGKGGF++ ++ D+ + A KV L K +++K +
Sbjct: 22 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST------ 75
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
E IHK+LD+P VV + FE D + VLE C L K+ K + E EAR +
Sbjct: 76 -EIAIHKSLDNPHVVGFHGFFE-DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 133
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q + ++YL+ + VIH DLK GN+ L + ++KI DFGL+ ++ ++ + D
Sbjct: 134 QTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM---DVKIGDFGLATKIE---FDGERKKD 185
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
L GT Y+ PE + S +VD+WS+G I Y L GK PF + + L+
Sbjct: 186 L----CGTPNYIAPEVLCKKGH----SFEVDIWSLGCILYTLLVGKPPF-----ETSCLK 232
Query: 520 ENTI 523
E I
Sbjct: 233 ETYI 236
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 120/232 (51%), Gaps = 18/232 (7%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I + + H V+ L+DV+E + +LE G +L +L Q ++++E EA S +
Sbjct: 64 REVSILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNV-CGEIKITDFGLSKVMDEENYNPDHGM 458
Q++ + YL+ K + H+DLKP NI+L + N+ IK+ DFGL+ +++ G+
Sbjct: 123 QILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-------GV 173
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
+ + GT ++ PE +V P + + D+WS+GVI Y L G PF + Q T+
Sbjct: 174 EFKNI-FGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 519 EENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQP 570
+ + +F ++ S AK FIR L R+ + RH ++ P
Sbjct: 229 NITAVSYDFDEEFFSQ--TSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 24/247 (9%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E EA +
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGM 458
Q+++ + YL+ ++ + H+DLKP NI+L + NV IKI DFGL+ H +
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----------HKI 168
Query: 459 DLTSQGA---GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
D ++ GT ++ PE +V P + + D+WS+GVI Y L G PF + Q
Sbjct: 169 DFGNEFKNIFGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
T+ + + E ++ + S AK FIR L + R+ + +H +++P +
Sbjct: 225 TLANVSAVNYEFEDEYFS--NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Query: 576 GRQSASS 582
SA S
Sbjct: 283 ALSSAWS 289
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 24/247 (9%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E EA +
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGM 458
Q+++ + YL+ ++ + H+DLKP NI+L + NV IKI DFGL+ H +
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----------HKI 168
Query: 459 DLTSQGA---GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
D ++ GT ++ PE +V P + + D+WS+GVI Y L G PF + Q
Sbjct: 169 DFGNEFKNIFGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
T+ + + E ++ + S AK FIR L + R+ + +H +++P +
Sbjct: 225 TLANVSAVNYEFEDEYFS--NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Query: 576 GRQSASS 582
SA S
Sbjct: 283 ALSSAWS 289
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 24/247 (9%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E EA +
Sbjct: 62 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 120
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGM 458
Q+++ + YL+ ++ + H+DLKP NI+L + NV IKI DFGL+ H +
Sbjct: 121 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----------HKI 167
Query: 459 DLTSQGA---GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
D ++ GT ++ PE +V P + + D+WS+GVI Y L G PF + Q
Sbjct: 168 DFGNEFKNIFGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQE 223
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
T+ + + E ++ + S AK FIR L + R+ + +H +++P +
Sbjct: 224 TLANVSAVNYEFEDEYFS--NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 281
Query: 576 GRQSASS 582
SA S
Sbjct: 282 ALSSAWS 288
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 126/261 (48%), Gaps = 32/261 (12%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHALREYNIH 345
Y LL +GKG F++V A + + VA K+ QLN ++ ++ RE I
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN--------SSSLQKLFREVRIM 60
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
K L+HP +VKL++V E + + V+EY G ++ YL H + E+EAR+ Q+VSA+
Sbjct: 61 KVLNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAV 119
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
+Y ++ ++H DLK N+LL + IKI DFG S + + +D
Sbjct: 120 QYCHQ--KFIVHRDLKAENLLL---DADMNIKIADFGFSN-----EFTFGNKLD---TFC 166
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATILEENTIL 524
G+ Y PE F + +VDVWS+GVI Y + G PF G N + L E +
Sbjct: 167 GSPPYAAPELF---QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE---LRERVLR 220
Query: 525 KATEVQFANKPTVSNEAKGFI 545
+ F N K F+
Sbjct: 221 GKYRIPFYMSTDCENLLKKFL 241
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 131/281 (46%), Gaps = 36/281 (12%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLN--KDWKEDKKANYIKHALREYNIHKALDHP 351
+LG G F +VHK + +A K+ + KD +E K E ++ LDH
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKN---------EISVMNQLDHA 146
Query: 352 RVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNE 410
+++LYD FE N V+EY DG +L D + + + E + + Q+ ++++++
Sbjct: 147 NLIQLYDAFE-SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ 205
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
+ ++H DLKP NIL + +IKI DFGL++ Y P + + GT +
Sbjct: 206 MY--ILHLDLKPENILCVNRD-AKQIKIIDFGLAR-----RYKPREKLKVN---FGTPEF 254
Query: 471 LPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQA--TILEENTILKAT 527
L PE N +S D+WSVGVI Y L G PF G N ++ IL L+
Sbjct: 255 LAPEVV----NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDE 310
Query: 528 EVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
E Q +S EAK FI L K RI +H +L
Sbjct: 311 EFQ-----DISEEAKEFISKLLIKEKSWRISASEALKHPWL 346
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 24/247 (9%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E EA +
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGM 458
Q+++ + YL+ ++ + H+DLKP NI+L + NV IKI DFGL+ H +
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----------HKI 168
Query: 459 DLTSQGA---GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
D ++ GT ++ PE +V P + + D+WS+GVI Y L G PF + Q
Sbjct: 169 DFGNEFKNIFGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
T+ + + E ++ + S AK FIR L + R+ + +H +++P +
Sbjct: 225 TLANVSAVNYEFEDEYFS--NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Query: 576 GRQSASS 582
SA S
Sbjct: 283 ALSSAWS 289
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 120/232 (51%), Gaps = 18/232 (7%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I + + H V+ L+DV+E + +LE G +L +L Q ++++E EA S +
Sbjct: 64 REVSILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNV-CGEIKITDFGLSKVMDEENYNPDHGM 458
Q++ + YL+ K + H+DLKP NI+L + N+ IK+ DFGL+ +++ G+
Sbjct: 123 QILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-------GV 173
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
+ + GT ++ PE +V P + + D+WS+GVI Y L G PF + Q T+
Sbjct: 174 EFKNI-FGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 519 EENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQP 570
++ + +F + S AK FIR L R+ + RH ++ P
Sbjct: 229 NITSVSYDFDEEFFSH--TSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 24/247 (9%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E EA +
Sbjct: 62 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 120
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGM 458
Q+++ + YL+ ++ + H+DLKP NI+L + NV IKI DFGL+ H +
Sbjct: 121 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----------HKI 167
Query: 459 DLTSQGA---GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
D ++ GT ++ PE +V P + + D+WS+GVI Y L G PF + Q
Sbjct: 168 DFGNEFKNIFGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQE 223
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
T+ + + E ++ + S AK FIR L + R+ + +H +++P +
Sbjct: 224 TLANVSAVNYEFEDEYFS--NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 281
Query: 576 GRQSASS 582
SA S
Sbjct: 282 ALSSAWS 288
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 120/232 (51%), Gaps = 18/232 (7%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I + + H V+ L+DV+E + +LE G +L +L Q ++++E EA S +
Sbjct: 64 REVSILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNV-CGEIKITDFGLSKVMDEENYNPDHGM 458
Q++ + YL+ K + H+DLKP NI+L + N+ IK+ DFGL+ +++ G+
Sbjct: 123 QILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-------GV 173
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
+ + GT ++ PE +V P + + D+WS+GVI Y L G PF + Q T+
Sbjct: 174 EFKNI-FGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 519 EENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQP 570
++ + +F + S AK FIR L R+ + RH ++ P
Sbjct: 229 NITSVSYDFDEEFFSH--TSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 120/232 (51%), Gaps = 18/232 (7%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I + + H V+ L+DV+E + +LE G +L +L Q ++++E EA S +
Sbjct: 64 REVSILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNV-CGEIKITDFGLSKVMDEENYNPDHGM 458
Q++ + YL+ K + H+DLKP NI+L + N+ IK+ DFGL+ +++ G+
Sbjct: 123 QILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-------GV 173
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
+ + GT ++ PE +V P + + D+WS+GVI Y L G PF + Q T+
Sbjct: 174 EFKNI-FGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 519 EENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQP 570
+ + +F ++ S AK FIR L R+ + RH ++ P
Sbjct: 229 NITAVSYDFDEEFFSQ--TSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 143/296 (48%), Gaps = 32/296 (10%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G F+ V K + A K + + K ++ + RE +I K + HP V+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRT-KSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
L++V+E + +LE G +L +L + +++ E EA + Q+++ + YL+ ++
Sbjct: 78 TLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-- 134
Query: 415 VIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGMDLTSQGA---GTYWY 470
+ H+DLKP NI+L + NV IKI DFGL+ H +D ++ GT +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----------HKIDFGNEFKNIFGTPAF 183
Query: 471 LPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQ 530
+ PE +V P + + D+WS+GVI Y L G PF + Q T+ + A +
Sbjct: 184 VAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQETLAN----VSAVNYE 235
Query: 531 FANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKHGRQSASSSA 584
F ++ S AK FIR L + R+ + +H +++ PK +Q+ S A
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK---PKDTQQALSRKA 288
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 120/232 (51%), Gaps = 18/232 (7%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I + + H V+ L+DV+E + +LE G +L +L Q ++++E EA S +
Sbjct: 64 REVSILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNV-CGEIKITDFGLSKVMDEENYNPDHGM 458
Q++ + YL+ K + H+DLKP NI+L + N+ IK+ DFGL+ +++ G+
Sbjct: 123 QILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-------GV 173
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
+ + GT ++ PE +V P + + D+WS+GVI Y L G PF + Q T+
Sbjct: 174 EFKNI-FGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 519 EENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQP 570
++ + +F + S AK FIR L R+ + RH ++ P
Sbjct: 229 NITSVSYDFDEEFFSH--TSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 116/227 (51%), Gaps = 29/227 (12%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHALREYNIH 345
Y L +GKG F++V A + R VA K+ QLN ++ RE I
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLN--------PTSLQKLFREVRIM 68
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
K L+HP +VKL++V E + + V+EY G ++ YL H + E+EAR+ Q+VSA+
Sbjct: 69 KILNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 127
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
+Y ++ ++H DLK N+LL +G++ IKI DFG S + + +D
Sbjct: 128 QYCHQ--KYIVHRDLKAENLLL-DGDM--NIKIADFGFSN-----EFTVGNKLDTF---C 174
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHN 511
G+ Y PE F K +VDVWS+GVI Y + G PF G N
Sbjct: 175 GSPPYAAPELFQGKKYD---GPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 127/251 (50%), Gaps = 31/251 (12%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E EA +
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGM 458
Q+++ + YL+ ++ + H+DLKP NI+L + NV IKI DFGL+ H +
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----------HKI 168
Query: 459 DLTSQGA---GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
D ++ GT ++ PE +V P + + D+WS+GVI Y L G PF + Q
Sbjct: 169 DFGNEFKNIFGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 516 TILEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVP 573
T+ + A +F ++ S AK FIR L + R+ + +H +++ P
Sbjct: 225 TLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK---P 277
Query: 574 KHGRQSASSSA 584
K +Q+ S A
Sbjct: 278 KDTQQALSRKA 288
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 127/251 (50%), Gaps = 31/251 (12%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E EA +
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGM 458
Q+++ + YL+ ++ + H+DLKP NI+L + NV IKI DFGL+ H +
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----------HKI 168
Query: 459 DLTSQGA---GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
D ++ GT ++ PE +V P + + D+WS+GVI Y L G PF + Q
Sbjct: 169 DFGNEFKNIFGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 516 TILEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVP 573
T+ + A +F ++ S AK FIR L + R+ + +H +++ P
Sbjct: 225 TLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK---P 277
Query: 574 KHGRQSASSSA 584
K +Q+ S A
Sbjct: 278 KDTQQALSRKA 288
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 118/244 (48%), Gaps = 32/244 (13%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHAL 339
P RY+ LGKGGF++ ++ D+ + A KV L K +++K +
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST------ 91
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
E IHK+LD+P VV + FE D + VLE C L K+ K + E EAR +
Sbjct: 92 -EIAIHKSLDNPHVVGFHGFFE-DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 149
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q + ++YL+ + VIH DLK GN+ L + ++KI DFGL+ ++ + +
Sbjct: 150 QTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM---DVKIGDFGLATKIEFDG-------E 197
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
GT Y+ PE + S +VD+WS+G I Y L GK PF + + L+
Sbjct: 198 RKKTLCGTPNYIAPEVLCKKGH----SFEVDIWSLGCILYTLLVGKPPF-----ETSCLK 248
Query: 520 ENTI 523
E I
Sbjct: 249 ETYI 252
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 127/251 (50%), Gaps = 31/251 (12%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E EA +
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGM 458
Q+++ + YL+ ++ + H+DLKP NI+L + NV IKI DFGL+ H +
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----------HKI 168
Query: 459 DLTSQGA---GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
D ++ GT ++ PE +V P + + D+WS+GVI Y L G PF + Q
Sbjct: 169 DFGNEFKNIFGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 516 TILEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVP 573
T+ + A +F ++ S AK FIR L + R+ + +H +++ P
Sbjct: 225 TLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK---P 277
Query: 574 KHGRQSASSSA 584
K +Q+ S A
Sbjct: 278 KDTQQALSRKA 288
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 127/251 (50%), Gaps = 31/251 (12%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E EA +
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGM 458
Q+++ + YL+ ++ + H+DLKP NI+L + NV IKI DFGL+ H +
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----------HKI 168
Query: 459 DLTSQGA---GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
D ++ GT ++ PE +V P + + D+WS+GVI Y L G PF + Q
Sbjct: 169 DFGNEFKNIFGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 516 TILEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVP 573
T+ + A +F ++ S AK FIR L + R+ + +H +++ P
Sbjct: 225 TLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK---P 277
Query: 574 KHGRQSASSSA 584
K +Q+ S A
Sbjct: 278 KDTQQALSRKA 288
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 118/244 (48%), Gaps = 32/244 (13%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHAL 339
P RY+ LGKGGF++ ++ D+ + A KV L K +++K +
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST------ 91
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
E IHK+LD+P VV + FE D + VLE C L K+ K + E EAR +
Sbjct: 92 -EIAIHKSLDNPHVVGFHGFFE-DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 149
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q + ++YL+ + VIH DLK GN+ L + ++KI DFGL+ ++ + +
Sbjct: 150 QTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM---DVKIGDFGLATKIEFDG-------E 197
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
GT Y+ PE + S +VD+WS+G I Y L GK PF + + L+
Sbjct: 198 RKKXLCGTPNYIAPEVLCKKGH----SFEVDIWSLGCILYTLLVGKPPF-----ETSCLK 248
Query: 520 ENTI 523
E I
Sbjct: 249 ETYI 252
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 123/261 (47%), Gaps = 32/261 (12%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHALREYNIH 345
Y LL +GKG F++V A + + VA K+ QLN ++ ++ RE I
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN--------SSSLQKLFREVRIX 67
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
K L+HP +VKL++V E + + V EY G ++ YL H E+EAR+ Q+VSA+
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYL-VXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAV 126
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
+Y ++ ++H DLK N+LL + IKI DFG S + + +D
Sbjct: 127 QYCHQ--KFIVHRDLKAENLLL---DADXNIKIADFGFSN-----EFTFGNKLDAF---C 173
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATILEENTIL 524
G Y PE F K +VDVWS+GVI Y + G PF G N + L E +
Sbjct: 174 GAPPYAAPELFQGKKYD---GPEVDVWSLGVILYTLVSGSLPFDGQNLKE---LRERVLR 227
Query: 525 KATEVQFANKPTVSNEAKGFI 545
+ F N K F+
Sbjct: 228 GKYRIPFYXSTDCENLLKKFL 248
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 94
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 95 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 151
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 152 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANXFVGTAQYVSP 203
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 204 E-LLTEKSAXKSS---DLWALGCIIYQLVAGLPPF 234
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 121/237 (51%), Gaps = 28/237 (11%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E EA +
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGM 458
Q+++ + YL+ ++ + H+DLKP NI+L + NV IKI DFGL+ H +
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----------HKI 168
Query: 459 DLTSQGA---GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
D ++ GT ++ PE +V P + + D+WS+GVI Y L G PF + Q
Sbjct: 169 DFGNEFKNIFGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 516 TILEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQP 570
T+ + A +F ++ S AK FIR L + R+ + +H +++P
Sbjct: 225 TLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 121/235 (51%), Gaps = 24/235 (10%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E EA +
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGM 458
Q+++ + YL+ ++ + H+DLKP NI+L + NV IKI DFGL+ H +
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----------HKI 168
Query: 459 DLTSQGA---GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
D ++ GT ++ PE +V P + + D+WS+GVI Y L G PF + Q
Sbjct: 169 DFGNEFKNIFGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQP 570
T+ + + E ++ + S AK FIR L + R+ + +H +++P
Sbjct: 225 TLANVSAVNYEFEDEYFS--NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 121/235 (51%), Gaps = 24/235 (10%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E EA +
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGM 458
Q+++ + YL+ ++ + H+DLKP NI+L + NV IKI DFGL+ H +
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----------HKI 168
Query: 459 DLTSQGA---GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
D ++ GT ++ PE +V P + + D+WS+GVI Y L G PF + Q
Sbjct: 169 DFGNEFKNIFGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQP 570
T+ + + E ++ + S AK FIR L + R+ + +H +++P
Sbjct: 225 TLANVSAVNYEFEDEYFS--NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 139/299 (46%), Gaps = 31/299 (10%)
Query: 282 HPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
H V + + L LLGKG F +V + RY A K+ + +D+ + H L E
Sbjct: 143 HRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VAHTLTE 198
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQV 401
+ + HP + L F+ + C V+EY +G +L F+L + + +E AR ++
Sbjct: 199 NRVLQNSRHPFLTALKYSFQTH-DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 257
Query: 402 VSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLT 461
VSAL YL+ K V++ DLK N++L + G IKITDFGL K E M
Sbjct: 258 VSALDYLHSEK-NVVYRDLKLENLMLDKD---GHIKITDFGLCK----EGIKDGATM--- 306
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEEN 521
GT YL PE V+ N VD W +GV+ Y+ + G+ PF +NQ + E
Sbjct: 307 KTFCGTPEYLAPE--VLEDN--DYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHEKLFE-- 359
Query: 522 TILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRI-----DVISLARHDYLQPPVPKH 575
++ E++F T+ EAK + L + R+ D + +H + V +H
Sbjct: 360 -LILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQH 415
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 95
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 96 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 152
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 153 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANSFVGTAQYVSP 204
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 205 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 235
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 139/299 (46%), Gaps = 31/299 (10%)
Query: 282 HPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
H V + + L LLGKG F +V + RY A K+ + +D+ + H L E
Sbjct: 146 HRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VAHTLTE 201
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQV 401
+ + HP + L F+ + C V+EY +G +L F+L + + +E AR ++
Sbjct: 202 NRVLQNSRHPFLTALKYSFQTH-DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 260
Query: 402 VSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLT 461
VSAL YL+ K V++ DLK N++L + G IKITDFGL K E M
Sbjct: 261 VSALDYLHSEK-NVVYRDLKLENLMLDKD---GHIKITDFGLCK----EGIKDGATM--- 309
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEEN 521
GT YL PE V+ N VD W +GV+ Y+ + G+ PF +NQ + E
Sbjct: 310 KTFCGTPEYLAPE--VLEDN--DYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHEKLFE-- 362
Query: 522 TILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRI-----DVISLARHDYLQPPVPKH 575
++ E++F T+ EAK + L + R+ D + +H + V +H
Sbjct: 363 -LILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQH 418
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 92
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 93 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 149
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 150 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANXFVGTAQYVSP 201
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 202 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 232
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 92
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 93 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 149
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 150 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANXFVGTAQYVSP 201
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 202 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 232
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 94
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 95 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 151
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 152 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANXFVGTAQYVSP 203
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 204 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 94
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 95 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 151
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 152 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANXFVGTAQYVSP 203
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 204 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 42 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 97
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 98 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 154
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 155 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANXFVGTAQYVSP 206
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 207 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 237
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 95
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 96 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 152
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 153 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANXFVGTAQYVSP 204
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 205 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 235
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 92
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 93 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 149
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 150 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANAFVGTAQYVSP 201
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 202 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 232
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 94
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 95 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 151
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 152 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANXFVGTAQYVSP 203
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 204 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 94
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 95 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 151
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 152 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANXFVGTAQYVSP 203
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 204 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 14 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 69
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 70 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 126
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 127 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANXFVGTAQYVSP 178
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 179 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 209
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 15 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 70
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 71 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 127
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 128 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANXFVGTAQYVSP 179
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 180 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 210
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 17 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 72
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 73 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 129
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 130 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANXFVGTAQYVSP 181
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 182 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 212
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 44 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 99
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 100 VKLYFCFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 156
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 157 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANXFVGTAQYVSP 208
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 209 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 239
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 16 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 71
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 72 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 128
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 129 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANXFVGTAQYVSP 180
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 181 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 211
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 91
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 92 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 148
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 149 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANSFVGTAQYVSP 200
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 201 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 231
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 24/247 (9%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE +I K + HP V+ L++V+E + + E G +L +L + +++ E EA +
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGM 458
Q+++ + YL+ ++ + H+DLKP NI+L + NV IKI DFGL+ H +
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----------HKI 168
Query: 459 DLTSQGA---GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
D ++ GT ++ PE +V P + + D+WS+GVI Y L G PF + Q
Sbjct: 169 DFGNEFKNIFGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
T+ + + E ++ + S AK FIR L + R+ + +H +++P +
Sbjct: 225 TLANVSAVNYEFEDEYFS--NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Query: 576 GRQSASS 582
SA S
Sbjct: 283 ALSSAWS 289
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 21 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 76
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 77 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 133
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 134 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANXFVGTAQYVSP 185
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 186 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 216
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 91
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 92 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 148
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 149 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANXFVGTAQYVSP 200
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 201 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 231
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 109/215 (50%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS V A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 94
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y L Y+++ + E R ++VSAL+YL+
Sbjct: 95 VKLYFTFQDDEKLYFG-LSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 151
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 152 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANSFVGTAQYVSP 203
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 204 E-LLTEKSASKSS---DLWALGCIIYQLVAGLPPF 234
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 131/280 (46%), Gaps = 28/280 (10%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG+G FS K K + A K+ ++K + + + L E HP +V
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKI--ISKRMEANTQKEITALKLCE-------GHPNIV 69
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
KL++VF ++F V+E +G +L +K+ K +E EA I+ ++VSA+ +++++
Sbjct: 70 KLHEVFHDQLHTF-LVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVG-- 126
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPE 474
V+H DLKP N+L T+ N EIKI DFG +++ +N P T Y PE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QP------LKTPCFTLHYAAPE 179
Query: 475 CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKAT---EVQF 531
N D+WS+GVI Y L G+ PF + T I+K + F
Sbjct: 180 LL----NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF 235
Query: 532 ANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+ VS EAK I+ L R+ + L +++LQ
Sbjct: 236 EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQ 275
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 19/215 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+G FS A +L R A K+ + KE+K + + RE ++ LDHP
Sbjct: 37 ILGEGSFSTTVLARELATSREYAIKILEKRHIIKENK----VPYVTRERDVMSRLDHPFF 92
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
VKLY F+ D + L Y +L Y+++ + E R ++VSAL+YL+
Sbjct: 93 VKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH--GK 149
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLKP NILL E I+ITDFG +KV+ +P+ + GT Y+ P
Sbjct: 150 GIIHRDLKPENILLNEDM---HIQITDFGTAKVL-----SPESKQARANXFVGTAQYVSP 201
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K+ K S D+W++G I YQ + G PF
Sbjct: 202 E-LLTEKSACKSS---DLWALGCIIYQLVAGLPPF 232
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 96
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 97 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 154
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P D GT YLPP
Sbjct: 155 -VIHRDIKPENLLL---GSAGELKIADFGWSV------HAPSSRRD---DLCGTLDYLPP 201
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 202 E-MIEGR---MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 251
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 252 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 138/297 (46%), Gaps = 31/297 (10%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
V + + L LLGKG F +V + RY A K+ + +D+ + H L E
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VAHTLTENR 61
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
+ + HP + L F+ + C V+EY +G +L F+L + + +E AR ++VS
Sbjct: 62 VLQNSRHPFLTALKYSFQTH-DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS 120
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
AL YL+ K V++ DLK N++L + G IKITDFGL K E M
Sbjct: 121 ALDYLHSEK-NVVYRDLKLENLMLDKD---GHIKITDFGLCK----EGIKDGATM---KX 169
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
GT YL PE V+ N VD W +GV+ Y+ + G+ PF +NQ + E +
Sbjct: 170 FCGTPEYLAPE--VLEDN--DYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHEKLFE---L 221
Query: 524 LKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRI-----DVISLARHDYLQPPVPKH 575
+ E++F T+ EAK + L + R+ D + +H + V +H
Sbjct: 222 ILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQH 276
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 138/297 (46%), Gaps = 31/297 (10%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
V + + L LLGKG F +V + RY A K+ + +D+ + H L E
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VAHTLTENR 62
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
+ + HP + L F+ + C V+EY +G +L F+L + + +E AR ++VS
Sbjct: 63 VLQNSRHPFLTALKYSFQTH-DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS 121
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
AL YL+ K V++ DLK N++L + G IKITDFGL K E M
Sbjct: 122 ALDYLHSEK-NVVYRDLKLENLMLDKD---GHIKITDFGLCK----EGIKDGATM---KX 170
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
GT YL PE V+ N VD W +GV+ Y+ + G+ PF +NQ + E +
Sbjct: 171 FCGTPEYLAPE--VLEDN--DYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHEKLFE---L 222
Query: 524 LKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRI-----DVISLARHDYLQPPVPKH 575
+ E++F T+ EAK + L + R+ D + +H + V +H
Sbjct: 223 ILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQH 277
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 138/297 (46%), Gaps = 31/297 (10%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
V + + L LLGKG F +V + RY A K+ + +D+ + H L E
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VAHTLTENR 60
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
+ + HP + L F+ + C V+EY +G +L F+L + + +E AR ++VS
Sbjct: 61 VLQNSRHPFLTALKYSFQTH-DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS 119
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
AL YL+ K V++ DLK N++L + G IKITDFGL K E M
Sbjct: 120 ALDYLHSEK-NVVYRDLKLENLMLDKD---GHIKITDFGLCK----EGIKDGATM---KX 168
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
GT YL PE V+ N VD W +GV+ Y+ + G+ PF +NQ + E +
Sbjct: 169 FCGTPEYLAPE--VLEDN--DYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHEKLFE---L 220
Query: 524 LKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRI-----DVISLARHDYLQPPVPKH 575
+ E++F T+ EAK + L + R+ D + +H + V +H
Sbjct: 221 ILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQH 275
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 125/258 (48%), Gaps = 27/258 (10%)
Query: 292 LMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
L LLGKG F +V + RY A K+ + +D+ A H + E + + HP
Sbjct: 13 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESRVLQNTRHP 68
Query: 352 RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
+ L F+ + C V+EY +G +L F+L + + E AR ++VSAL+YL+
Sbjct: 69 FLTALKYAFQTH-DRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH-- 125
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
V++ D+K N++L + G IKITDFGL K E + M GT YL
Sbjct: 126 SRDVVYRDIKLENLMLDKD---GHIKITDFGLCK----EGISDGATM---KTFCGTPEYL 175
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQF 531
PE V+ N VD W +GV+ Y+ + G+ PF +NQ + E ++ E++F
Sbjct: 176 APE--VLEDN--DYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHERLFE---LILMEEIRF 227
Query: 532 ANKPTVSNEAKGFIRSCL 549
T+S EAK + L
Sbjct: 228 PR--TLSPEAKSLLAGLL 243
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 116/228 (50%), Gaps = 19/228 (8%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR 340
N V D + +L +GKG F +V ++ A K +NK ++ + N +++ +
Sbjct: 9 NEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKY--MNK--QKCVERNEVRNVFK 64
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I + L+HP +V L+ F+ + + F V++ G DL ++L+Q+ E + + +
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMF-MVVDLLLGGDLRYHLQQNVHFKEETVKLFICE 123
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+V AL YL + +IH D+KP NILL E G + ITDF ++ ++ E
Sbjct: 124 LVMALDYLQNQR--IIHRDMKPDNILLDEH---GHVHITDFNIAAMLPRETQ-------- 170
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ AGT Y+ PE F K S VD WS+GV Y+ L G++P+
Sbjct: 171 ITTMAGTKPYMAPEMFSSRKGA-GYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 125/258 (48%), Gaps = 27/258 (10%)
Query: 292 LMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
L LLGKG F +V + RY A K+ + +D+ A H + E + + HP
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESRVLQNTRHP 65
Query: 352 RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
+ L F+ + C V+EY +G +L F+L + + E AR ++VSAL+YL+
Sbjct: 66 FLTALKYAFQTH-DRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH-- 122
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
V++ D+K N++L + G IKITDFGL K E + M GT YL
Sbjct: 123 SRDVVYRDIKLENLMLDKD---GHIKITDFGLCK----EGISDGATM---KXFCGTPEYL 172
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQF 531
PE V+ N VD W +GV+ Y+ + G+ PF +NQ + E ++ E++F
Sbjct: 173 APE--VLEDN--DYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHERLFE---LILMEEIRF 224
Query: 532 ANKPTVSNEAKGFIRSCL 549
T+S EAK + L
Sbjct: 225 PR--TLSPEAKSLLAGLL 240
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 22/233 (9%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE NI + + HP ++ L+D+FE + +LE G +L +L + +++ E EA +
Sbjct: 57 REVNILREIRHPNIITLHDIFE-NKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLK 115
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGM 458
Q++ + YL+ + + H+DLKP NI+L + NV IK+ DFG++ ++ N +
Sbjct: 116 QILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI-- 171
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
GT ++ PE +V P + + D+WS+GVI Y L G PF Q T+
Sbjct: 172 ------FGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGETKQETL- 220
Query: 519 EENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
T + A F + S AK FIR L + R+ + H +++
Sbjct: 221 ---TNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 125/258 (48%), Gaps = 27/258 (10%)
Query: 292 LMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
L LLGKG F +V + RY A K+ + +D+ A H + E + + HP
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESRVLQNTRHP 65
Query: 352 RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
+ L F+ + C V+EY +G +L F+L + + E AR ++VSAL+YL+
Sbjct: 66 FLTALKYAFQTH-DRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH-- 122
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
V++ D+K N++L + G IKITDFGL K E + M GT YL
Sbjct: 123 SRDVVYRDIKLENLMLDKD---GHIKITDFGLCK----EGISDGATM---KTFCGTPEYL 172
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQF 531
PE V+ N VD W +GV+ Y+ + G+ PF +NQ + E ++ E++F
Sbjct: 173 APE--VLEDN--DYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHERLFE---LILMEEIRF 224
Query: 532 ANKPTVSNEAKGFIRSCL 549
T+S EAK + L
Sbjct: 225 PR--TLSPEAKSLLAGLL 240
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 125/258 (48%), Gaps = 27/258 (10%)
Query: 292 LMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
L LLGKG F +V + RY A K+ + +D+ A H + E + + HP
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESRVLQNTRHP 65
Query: 352 RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
+ L F+ + C V+EY +G +L F+L + + E AR ++VSAL+YL+
Sbjct: 66 FLTALKYAFQTH-DRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH-- 122
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
V++ D+K N++L + G IKITDFGL K E + M GT YL
Sbjct: 123 SRDVVYRDIKLENLMLDKD---GHIKITDFGLCK----EGISDGATM---KXFCGTPEYL 172
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQF 531
PE V+ N VD W +GV+ Y+ + G+ PF +NQ + E ++ E++F
Sbjct: 173 APE--VLEDN--DYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHERLFE---LILMEEIRF 224
Query: 532 ANKPTVSNEAKGFIRSCL 549
T+S EAK + L
Sbjct: 225 PR--TLSPEAKSLLAGLL 240
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 22/233 (9%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE NI + + HP ++ L+D+FE + +LE G +L +L + +++ E EA +
Sbjct: 78 REVNILREIRHPNIITLHDIFE-NKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLK 136
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGM 458
Q++ + YL+ + + H+DLKP NI+L + NV IK+ DFG++ ++ N +
Sbjct: 137 QILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI-- 192
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
GT ++ PE +V P + + D+WS+GVI Y L G PF Q T+
Sbjct: 193 ------FGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGETKQETL- 241
Query: 519 EENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
T + A F + S AK FIR L + R+ + H +++
Sbjct: 242 ---TNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 125/258 (48%), Gaps = 27/258 (10%)
Query: 292 LMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
L LLGKG F +V + RY A K+ + +D+ A H + E + + HP
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESRVLQNTRHP 65
Query: 352 RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
+ L F+ + C V+EY +G +L F+L + + E AR ++VSAL+YL+
Sbjct: 66 FLTALKYAFQTH-DRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH-- 122
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
V++ D+K N++L + G IKITDFGL K E + M GT YL
Sbjct: 123 SRDVVYRDIKLENLMLDKD---GHIKITDFGLCK----EGISDGATM---KTFCGTPEYL 172
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQF 531
PE V+ N VD W +GV+ Y+ + G+ PF +NQ + E ++ E++F
Sbjct: 173 APE--VLEDN--DYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHERLFE---LILMEEIRF 224
Query: 532 ANKPTVSNEAKGFIRSCL 549
T+S EAK + L
Sbjct: 225 PR--TLSPEAKSLLAGLL 240
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 22/233 (9%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE NI + + HP ++ L+D+FE + +LE G +L +L + +++ E EA +
Sbjct: 64 REVNILREIRHPNIITLHDIFE-NKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLK 122
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGM 458
Q++ + YL+ + + H+DLKP NI+L + NV IK+ DFG++ ++ N +
Sbjct: 123 QILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI-- 178
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
GT ++ PE +V P + + D+WS+GVI Y L G PF Q T+
Sbjct: 179 ------FGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPFLGETKQETL- 227
Query: 519 EENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
T + A F + S AK FIR L + R+ + H +++
Sbjct: 228 ---TNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 96
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 97 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 154
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P + GT YLPP
Sbjct: 155 -VIHRDIKPENLLL---GSAGELKIADFGWSV------HAPS---SRRTTLCGTLDYLPP 201
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 202 E-MIEGR---MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 251
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 252 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 29/289 (10%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
Y +L +G GG S+V + + K+Q Y + +N + +++ + ++ + N K
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYA---IKYVNLEEADNQTLDSYRNEIAYLN--KLQ 112
Query: 349 DHP-RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKY 407
H ++++LYD +EI V+E C DL+ +LK+ K+I E +S ++ A+
Sbjct: 113 QHSDKIIRLYD-YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 408 LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGT 467
+++ ++H DLKP N L+ +G +K+ DFG++ M PD + GT
Sbjct: 171 IHQ--HGIVHSDLKPANFLIVDG----MLKLIDFGIANQM-----QPDTTSVVKDSQVGT 219
Query: 468 YWYLPPECFV-------VGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
Y+PPE GK+ KIS K DVWS+G I Y YGK PF +Q + L
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 279
Query: 521 NTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I E++F + P + + ++ CL + RI + L H Y+Q
Sbjct: 280 -IIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 132/290 (45%), Gaps = 46/290 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVL-----FKSQLEKEGVEHQLRREIEIQSHLRHPNI 77
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
+++Y+ F D +LE+ +L L++H E+ + + + ++ AL Y +E K
Sbjct: 78 LRMYNYFH-DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK- 135
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG-AGTYWYLP 472
VIH D+KP N+L+ GE+KI DFG S H L + GT YLP
Sbjct: 136 -VIHRDIKPENLLM---GYKGELKIADFGWSV----------HAPSLRRRXMCGTLDYLP 181
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF---GHNQSQATILEENTILKATEV 529
PE + GK KVD+W GV+ Y+ L G PF H ++ I+ V
Sbjct: 182 PE-MIEGKTH---DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV---------NV 228
Query: 530 QFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ-------PPV 572
P +S+ +K I L Y R+ + + H +++ PPV
Sbjct: 229 DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPV 278
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 71
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 72 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 129
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P D GT YLPP
Sbjct: 130 -VIHRDIKPENLLLGSA---GELKIADFGWSV------HAPSSRRDTL---CGTLDYLPP 176
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 177 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 226
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 227 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 125/258 (48%), Gaps = 27/258 (10%)
Query: 292 LMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
L LLGKG F +V + RY A K+ + +D+ A H + E + + HP
Sbjct: 15 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESRVLQNTRHP 70
Query: 352 RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
+ L F+ + C V+EY +G +L F+L + + E AR ++VSAL+YL+
Sbjct: 71 FLTALKYAFQT-HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH-- 127
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
V++ D+K N++L + G IKITDFGL K E + M GT YL
Sbjct: 128 SRDVVYRDIKLENLMLDKD---GHIKITDFGLCK----EGISDGATM---KXFCGTPEYL 177
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQF 531
PE V+ N VD W +GV+ Y+ + G+ PF +NQ + E ++ E++F
Sbjct: 178 APE--VLEDN--DYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHERLFE---LILMEEIRF 229
Query: 532 ANKPTVSNEAKGFIRSCL 549
T+S EAK + L
Sbjct: 230 PR--TLSPEAKSLLAGLL 245
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 125/258 (48%), Gaps = 27/258 (10%)
Query: 292 LMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
L LLGKG F +V + RY A K+ + +D+ A H + E + + HP
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESRVLQNTRHP 65
Query: 352 RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
+ L F+ + C V+EY +G +L F+L + + E AR ++VSAL+YL+
Sbjct: 66 FLTALKYAFQTH-DRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH-- 122
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
V++ D+K N++L + G IKITDFGL K E + M GT YL
Sbjct: 123 SRDVVYRDIKLENLMLDKD---GHIKITDFGLCK----EGISDGATM---KXFCGTPEYL 172
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQF 531
PE V+ N VD W +GV+ Y+ + G+ PF +NQ + E ++ E++F
Sbjct: 173 APE--VLEDN--DYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHERLFE---LILMEEIRF 224
Query: 532 ANKPTVSNEAKGFIRSCL 549
T+S EAK + L
Sbjct: 225 PR--TLSPEAKSLLAGLL 240
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 132/290 (45%), Gaps = 46/290 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVL-----FKSQLEKEGVEHQLRREIEIQSHLRHPNI 76
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
+++Y+ F D +LE+ +L L++H E+ + + + ++ AL Y +E K
Sbjct: 77 LRMYNYFH-DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK- 134
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG-AGTYWYLP 472
VIH D+KP N+L+ GE+KI DFG S H L + GT YLP
Sbjct: 135 -VIHRDIKPENLLM---GYKGELKIADFGWSV----------HAPSLRRRXMCGTLDYLP 180
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF---GHNQSQATILEENTILKATEV 529
PE + GK KVD+W GV+ Y+ L G PF H ++ I+ V
Sbjct: 181 PE-MIEGKTH---DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV---------NV 227
Query: 530 QFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ-------PPV 572
P +S+ +K I L Y R+ + + H +++ PPV
Sbjct: 228 DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPV 277
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 136/298 (45%), Gaps = 46/298 (15%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIH 345
D + ++ LGKG F V+ A + + + +A KV +K + ++H LR E I
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVL-----FKSQLEKEGVEHQLRREIEIQ 68
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
L HP ++++Y+ F D +LE+ +L L++H E+ + + + ++ AL
Sbjct: 69 SHLRHPNILRMYNYFH-DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG- 464
Y +E K VIH D+KP N+L+ GE+KI DFG S H L +
Sbjct: 128 HYCHERK--VIHRDIKPENLLM---GYKGELKIADFGWSV----------HAPSLRRRXM 172
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF---GHNQSQATILEEN 521
GT YLPPE + GK KVD+W GV+ Y+ L G PF H ++ I+
Sbjct: 173 CGTLDYLPPE-MIEGKTH---DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV--- 225
Query: 522 TILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ-------PPV 572
V P +S+ +K I L Y R+ + + H +++ PPV
Sbjct: 226 ------NVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPV 277
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 133/292 (45%), Gaps = 35/292 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 71
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 72 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 129
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P S GT YLPP
Sbjct: 130 -VIHRDIKPENLLL---GSAGELKIADFGWS------CHAPSSRRTTLS---GTLDYLPP 176
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 177 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 226
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQP----PVPKHGRQSAS 581
V+ A+ I L + R + + H ++ P ++SAS
Sbjct: 227 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNSQNKESAS 278
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 144/331 (43%), Gaps = 39/331 (11%)
Query: 258 IGYKNLHIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVAC 317
+G + ++ + H + + + ++ D + +LG G +V + F+ + Q A
Sbjct: 3 MGSGAMGSQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFAL 62
Query: 318 KVHQLNKDWKEDKKANYIKHALREYNIH-KALDHPRVVKLYDVFE-IDANSFC--TVLEY 373
K+ Q A RE +H +A P +V++ DV+E + A C V+E
Sbjct: 63 KMLQ------------DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC 110
Query: 374 CDGHDLDFYLKQH--KTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGN 431
DG +L ++ + EREA I+ + A++YL+ I + H D+KP N+L T
Sbjct: 111 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKR 168
Query: 432 VCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDV 491
+K+TDFG +K N LT+ Y Y+ PE V+G P K D+
Sbjct: 169 PNAILKLTDFGFAKETTSHN-------SLTTPCYTPY-YVAPE--VLG--PEKYDKSCDM 216
Query: 492 WSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANK--PTVSNEAKGFIRSCL 549
WS+GVI Y L G PF N A T ++ + +F N VS E K IR+ L
Sbjct: 217 WSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 276
Query: 550 AYRKEDRIDVISLARHDYLQ-----PPVPKH 575
R+ + H ++ P P H
Sbjct: 277 KTEPTQRMTITEFMNHPWIMQSTKVPQTPLH 307
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 144/324 (44%), Gaps = 39/324 (12%)
Query: 265 IRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK 324
+++ + H + + + ++ D + +LG G +V + F+ + Q A K+ Q
Sbjct: 1 MQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--- 57
Query: 325 DWKEDKKANYIKHALREYNIH-KALDHPRVVKLYDVFE-IDANSFC--TVLEYCDGHDLD 380
+ KA RE +H +A P +V++ DV+E + A C V+E DG +L
Sbjct: 58 ---DCPKAR------REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELF 108
Query: 381 FYLKQH--KTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKI 438
++ + EREA I+ + A++YL+ I + H D+KP N+L T +K+
Sbjct: 109 SRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKL 166
Query: 439 TDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
TDFG +K N LT+ Y Y+ PE V+G P K D+WS+GVI
Sbjct: 167 TDFGFAKETTSHN-------SLTTPCYTPY-YVAPE--VLG--PEKYDKSCDMWSLGVIM 214
Query: 499 YQCLYGKKPFGHNQSQATILEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDR 556
Y L G PF N A T ++ + +F N VS E K IR+ L R
Sbjct: 215 YILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQR 274
Query: 557 IDVISLARHDYLQ-----PPVPKH 575
+ + H ++ P P H
Sbjct: 275 MTITEFMNHPWIMQSTKVPQTPLH 298
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 155/316 (49%), Gaps = 40/316 (12%)
Query: 258 IGYKNLHIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVAC 317
+G +NL+ + ++ FNN +L+ + L G+G F+ V + + A
Sbjct: 13 LGTENLYFQSMEN--------FNNFYILTSKEL-----GRGKFAVVRQCISKSTGQEYAA 59
Query: 318 KVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGH 377
K + + +D +A I H + + K+ PRV+ L++V+E + + +LEY G
Sbjct: 60 KFLK-KRRRGQDCRAE-ILHEIAVLELAKSC--PRVINLHEVYE-NTSEIILILEYAAGG 114
Query: 378 DLDFYL---KQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG 434
++ F L + + ++E + ++ Q++ + YL++ ++H DLKP NILL+ G
Sbjct: 115 EI-FSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ--NNIVHLDLKPQNILLSSIYPLG 171
Query: 435 EIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSV 494
+IKI DFG+S+ + H +L + GT YL PE ++ +P I++ D+W++
Sbjct: 172 DIKIVDFGMSRKI-------GHACEL-REIMGTPEYLAPE--ILNYDP--ITTATDMWNI 219
Query: 495 GVIFYQCLYGKKPFGHNQSQATILEENTI-LKATEVQFANKPTVSNEAKGFIRSCLAYRK 553
G+I Y L PF +Q T L + + + +E F+ +VS A FI+S L
Sbjct: 220 GIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFS---SVSQLATDFIQSLLVKNP 276
Query: 554 EDRIDVISLARHDYLQ 569
E R H +LQ
Sbjct: 277 EKRPTAEICLSHSWLQ 292
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 29/289 (10%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
Y +L +G GG S+V + + K+Q Y + +N + +++ + ++ + N K
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYA---IKYVNLEEADNQTLDSYRNEIAYLN--KLQ 112
Query: 349 DHP-RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKY 407
H ++++LYD +EI V+E C DL+ +LK+ K+I E +S ++ A+
Sbjct: 113 QHSDKIIRLYD-YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 408 LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGT 467
+++ ++H DLKP N L+ +G +K+ DFG++ M PD + GT
Sbjct: 171 IHQ--HGIVHSDLKPANFLIVDG----MLKLIDFGIANQM-----QPDTTSVVKDSQVGT 219
Query: 468 YWYLPPECFV-------VGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
Y+PPE GK+ KIS K DVWS+G I Y YGK PF +Q + L
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 279
Query: 521 NTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I E++F + P + + ++ CL + RI + L H Y+Q
Sbjct: 280 -IIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 128/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY ++ L++ E+ + + ++ +AL Y + +
Sbjct: 76 LRLYGYFH-DATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR- 133
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P + GT YLPP
Sbjct: 134 -VIHRDIKPENLLLGSA---GELKIADFGWSV------HAPS---SRRTTLCGTLDYLPP 180
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 181 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 230
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 231 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 128/276 (46%), Gaps = 31/276 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVL-----FKTQLEKAGVEHQLRREVEIQSHLRHPNI 74
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 75 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR- 132
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P D GT YLPP
Sbjct: 133 -VIHRDIKPENLLLGSN---GELKIADFGWSV------HAPSSRRDTL---CGTLDYLPP 179
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L G PF + Q T + + V+F
Sbjct: 180 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGMPPFEAHTYQ------ETYRRISRVEFTF 229
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
V+ A+ I L + R+ + + H +++
Sbjct: 230 PDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 128/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 71 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 128
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P ++ GT YLPP
Sbjct: 129 -VIHRDIKPENLLLGSA---GELKIADFGWSV------HAPS---SRRTELCGTLDYLPP 175
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 176 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 225
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 141/323 (43%), Gaps = 39/323 (12%)
Query: 266 RELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKD 325
++ + H + + + ++ D + +LG G +V + F+ + Q A K+ Q
Sbjct: 3 QQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ---- 58
Query: 326 WKEDKKANYIKHALREYNIH-KALDHPRVVKLYDVFE-IDANSFC--TVLEYCDGHDLDF 381
A RE +H +A P +V++ DV+E + A C V+E DG +L
Sbjct: 59 --------DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFS 110
Query: 382 YLKQH--KTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKIT 439
++ + EREA I+ + A++YL+ I + H D+KP N+L T +K+T
Sbjct: 111 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLT 168
Query: 440 DFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFY 499
DFG +K N LT+ Y Y+ PE V+G P K D+WS+GVI Y
Sbjct: 169 DFGFAKETTSHN-------SLTTPCYTPY-YVAPE--VLG--PEKYDKSCDMWSLGVIMY 216
Query: 500 QCLYGKKPFGHNQSQATILEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRI 557
L G PF N A T ++ + +F N VS E K IR+ L R+
Sbjct: 217 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 276
Query: 558 DVISLARHDYLQ-----PPVPKH 575
+ H ++ P P H
Sbjct: 277 TITEFMNHPWIMQSTKVPQTPLH 299
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 147/335 (43%), Gaps = 41/335 (12%)
Query: 260 YKNLHIRELKRIHNEDQSRFNNHPV------LSDRYLLLMLLGKGGFSEVHKAFDLKEQR 313
Y I + + + + ++ PV + D Y +L LG G F VH+ + R
Sbjct: 18 YDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGR 77
Query: 314 YVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEY 373
K +N + DK E +I L HP+++ L+D FE D +LE+
Sbjct: 78 VFVAKF--INTPYPLDKYT-----VKNEISIMNQLHHPKLINLHDAFE-DKYEMVLILEF 129
Query: 374 CDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNV 432
G +L D + ++E E + + Q LK+++E ++H D+KP NI+ E
Sbjct: 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE--HSIVHLDIKPENIM-CETKK 186
Query: 433 CGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVW 492
+KI DFGL+ + NPD + +T+ A + PE +V + P + D+W
Sbjct: 187 ASSVKIIDFGLATKL-----NPDEIVKVTTATAE---FAAPE--IVDREP--VGFYTDMW 234
Query: 493 SVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKP--TVSNEAKGFIRSCLA 550
++GV+ Y L G PF T+ +K + +F +VS EAK FI++ L
Sbjct: 235 AIGVLGYVLLSGLSPFAGEDDLETLQN----VKRCDWEFDEDAFSSVSPEAKDFIKNLLQ 290
Query: 551 YRKEDRIDVISLARHDYLQPPVPKHGRQSASSSAP 585
R+ V HD L+ P K + +S P
Sbjct: 291 KEPRKRLTV-----HDALEHPWLKGDHSNLTSRIP 320
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 87
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 88 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 145
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P + GT YLPP
Sbjct: 146 -VIHRDIKPENLLLGSA---GELKIADFGWSV------HAPS---SRRTTLCGTLDYLPP 192
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 193 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 242
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 243 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 74 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 131
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P D GT YLPP
Sbjct: 132 -VIHRDIKPENLLL---GSAGELKIADFGWSV------HAPSSRRD---DLCGTLDYLPP 178
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 179 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 228
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 229 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 137/278 (49%), Gaps = 31/278 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACK-VHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
LG G FSEV A + + A K + + KE N E + + + H +
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIEN-------EIAVLRKIKHENI 82
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
V L D++E N V++ G +L + + E++A +++ QV+ A+ YL+ +
Sbjct: 83 VALEDIYE-SPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRM-- 139
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
++H DLKP N+L + +I I+DFGLSK+ + D+ S GT Y+ P
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--------EGKGDVMSTACGTPGYVAP 191
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E V+ + P S VD WS+GVI Y L G PF ++++ + + E+ ILKA E +F +
Sbjct: 192 E--VLAQKP--YSKAVDCWSIGVIAYILLCGYPPF-YDENDSKLFEQ--ILKA-EYEF-D 242
Query: 534 KP---TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
P +S+ AK FIR+ + R ARH ++
Sbjct: 243 SPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWI 280
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 29/289 (10%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
Y +L +G GG S+V + + K+Q Y + +N + +++ + ++ + N K
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYA---IKYVNLEEADNQTLDSYRNEIAYLN--KLQ 65
Query: 349 DHP-RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKY 407
H ++++LYD +EI V+E C DL+ +LK+ K+I E +S ++ A+
Sbjct: 66 QHSDKIIRLYD-YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 123
Query: 408 LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGT 467
+++ ++H DLKP N L+ +G +K+ DFG++ M PD + GT
Sbjct: 124 IHQ--HGIVHSDLKPANFLIVDG----MLKLIDFGIANQM-----QPDTTSVVKDSQVGT 172
Query: 468 YWYLPPECFV-------VGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
Y+PPE GK+ KIS K DVWS+G I Y YGK PF +Q + L
Sbjct: 173 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 232
Query: 521 NTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I E++F + P + + ++ CL + RI + L H Y+Q
Sbjct: 233 -IIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 141/323 (43%), Gaps = 39/323 (12%)
Query: 266 RELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKD 325
++ + H + + + ++ D + +LG G +V + F+ + Q A K+ Q
Sbjct: 1 QQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ---- 56
Query: 326 WKEDKKANYIKHALREYNIH-KALDHPRVVKLYDVFE-IDANSFC--TVLEYCDGHDLDF 381
A RE +H +A P +V++ DV+E + A C V+E DG +L
Sbjct: 57 --------DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFS 108
Query: 382 YLKQH--KTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKIT 439
++ + EREA I+ + A++YL+ I + H D+KP N+L T +K+T
Sbjct: 109 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLT 166
Query: 440 DFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFY 499
DFG +K N LT+ Y Y+ PE V+G P K D+WS+GVI Y
Sbjct: 167 DFGFAKETTSHN-------SLTTPCYTPY-YVAPE--VLG--PEKYDKSCDMWSLGVIMY 214
Query: 500 QCLYGKKPFGHNQSQATILEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRI 557
L G PF N A T ++ + +F N VS E K IR+ L R+
Sbjct: 215 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 274
Query: 558 DVISLARHDYLQ-----PPVPKH 575
+ H ++ P P H
Sbjct: 275 TITEFMNHPWIMQSTKVPQTPLH 297
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 144/299 (48%), Gaps = 29/299 (9%)
Query: 279 FNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA 338
F + V Y +L +G GG S+V + + K+Q Y + +N + +++ + ++
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYA---IKYVNLEEADNQTLDSYRNE 76
Query: 339 LREYNIHKALDHP-RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSI 397
+ N K H ++++LYD +EI V+E C DL+ +LK+ K+I E +S
Sbjct: 77 IAYLN--KLQQHSDKIIRLYD-YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY 132
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
++ A+ +++ ++H DLKP N L+ +G +K+ DFG++ M PD
Sbjct: 133 WKNMLEAVHTIHQ--HGIVHSDLKPANFLIVDG----MLKLIDFGIANQM-----QPDXX 181
Query: 458 MDLTSQGAGTYWYLPPECFV-------VGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGH 510
+ GT Y+PPE GK+ KIS K DVWS+G I Y YGK PF
Sbjct: 182 XVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
Query: 511 NQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+Q + L I E++F + P + + ++ CL + RI + L H Y+Q
Sbjct: 242 IINQISKLHA-IIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 76 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 133
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + DL GT YLPP
Sbjct: 134 -VIHRDIKPENLLLGSA---GELKIADFGWSV-----HAPSSRRTDL----CGTLDYLPP 180
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 181 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 230
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 231 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY ++ L++ E+ + + ++ +AL Y + +
Sbjct: 76 LRLYGYFH-DATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR- 133
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P GT YLPP
Sbjct: 134 -VIHRDIKPENLLL---GSAGELKIADFGWSV------HAPSSRRXXLX---GTLDYLPP 180
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 181 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 230
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 231 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 71 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 128
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + DL GT YLPP
Sbjct: 129 -VIHRDIKPENLLLGSA---GELKIADFGWSV-----HAPSSRRTDL----CGTLDYLPP 175
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 176 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 225
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 76 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 133
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P + GT YLPP
Sbjct: 134 -VIHRDIKPENLLLGSA---GELKIADFGWSV------HAPS---SRRTTLCGTLDYLPP 180
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 181 EX-IEGRXH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 230
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 231 PDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWI 265
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 71
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 72 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 129
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + DL GT YLPP
Sbjct: 130 -VIHRDIKPENLLLGSA---GELKIADFGWSV-----HAPSSRRTDL----CGTLDYLPP 176
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 177 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 226
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 227 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 134/305 (43%), Gaps = 39/305 (12%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
++ D + +LG G +V + F+ + Q A K+ Q A RE
Sbjct: 65 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ------------DCPKARREVE 112
Query: 344 IH-KALDHPRVVKLYDVFE-IDANSFC--TVLEYCDGHDLDFYLKQH--KTIAEREARSI 397
+H +A P +V++ DV+E + A C V+E DG +L ++ + EREA I
Sbjct: 113 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 172
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ + A++YL+ I + H D+KP N+L T +K+TDFG +K N
Sbjct: 173 MKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN------ 224
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATI 517
LT+ Y Y+ PE V+G P K D+WS+GVI Y L G PF N A
Sbjct: 225 -SLTTPCYTPY-YVAPE--VLG--PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 278
Query: 518 LEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ-----P 570
T ++ + +F N VS E K IR+ L R+ + H ++ P
Sbjct: 279 PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 338
Query: 571 PVPKH 575
P H
Sbjct: 339 QTPLH 343
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 76 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 133
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P + GT YLPP
Sbjct: 134 -VIHRDIKPENLLLGSA---GELKIADFGWSV------HAPS---SRRTTLCGTLDYLPP 180
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 181 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 230
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 231 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 144/299 (48%), Gaps = 29/299 (9%)
Query: 279 FNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA 338
F + V Y +L +G GG S+V + + K+Q Y + +N + +++ + ++
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYA---IKYVNLEEADNQTLDSYRNE 76
Query: 339 LREYNIHKALDHP-RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSI 397
+ N K H ++++LYD +EI V+E C DL+ +LK+ K+I E +S
Sbjct: 77 IAYLN--KLQQHSDKIIRLYD-YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY 132
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
++ A+ +++ ++H DLKP N L+ +G +K+ DFG++ M PD
Sbjct: 133 WKNMLEAVHTIHQ--HGIVHSDLKPANFLIVDG----MLKLIDFGIANQM-----QPDTT 181
Query: 458 MDLTSQGAGTYWYLPPECFV-------VGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGH 510
+ GT Y+PPE GK+ KIS K DVWS+G I Y YGK PF
Sbjct: 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
Query: 511 NQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+Q + L I E++F + P + + ++ CL + RI + L H Y+Q
Sbjct: 242 IINQISKLHA-IIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 138/317 (43%), Gaps = 39/317 (12%)
Query: 272 HNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKK 331
H + + + ++ D + +LG G +V + F+ + Q A K+ Q
Sbjct: 3 HVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ---------- 52
Query: 332 ANYIKHALREYNIH-KALDHPRVVKLYDVFE-IDANSFC--TVLEYCDGHDLDFYLKQH- 386
A RE +H +A P +V++ DV+E + A C V+E DG +L ++
Sbjct: 53 --DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRG 110
Query: 387 -KTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
+ EREA I+ + A++YL+ I + H D+KP N+L T +K+TDFG +K
Sbjct: 111 DQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
Query: 446 VMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGK 505
N LT+ Y Y+ PE V+G P K D+WS+GVI Y L G
Sbjct: 169 ETTSHN-------SLTTPCYTPY-YVAPE--VLG--PEKYDKSCDMWSLGVIMYILLCGY 216
Query: 506 KPFGHNQSQATILEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLA 563
PF N A T ++ + +F N VS E K IR+ L R+ +
Sbjct: 217 PPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFM 276
Query: 564 RHDYLQ-----PPVPKH 575
H ++ P P H
Sbjct: 277 NHPWIMQSTKVPQTPLH 293
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 71 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 128
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P + GT YLPP
Sbjct: 129 -VIHRDIKPENLLLGSA---GELKIADFGWSV------HAPS---SRRTTLCGTLDYLPP 175
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 176 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 225
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 74 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 131
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P + GT YLPP
Sbjct: 132 -VIHRDIKPENLLLGSA---GELKIADFGWSV------HAPS---SRRTTLCGTLDYLPP 178
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 179 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 228
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 229 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 134/305 (43%), Gaps = 39/305 (12%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
++ D + +LG G +V + F+ + Q A K+ Q A RE
Sbjct: 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ------------DCPKARREVE 106
Query: 344 IH-KALDHPRVVKLYDVFE-IDANSFC--TVLEYCDGHDLDFYLKQH--KTIAEREARSI 397
+H +A P +V++ DV+E + A C V+E DG +L ++ + EREA I
Sbjct: 107 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 166
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ + A++YL+ I + H D+KP N+L T +K+TDFG +K N
Sbjct: 167 MKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN------ 218
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATI 517
LT+ Y Y+ PE V+G P K D+WS+GVI Y L G PF N A
Sbjct: 219 -SLTTPCYTPY-YVAPE--VLG--PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 272
Query: 518 LEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ-----P 570
T ++ + +F N VS E K IR+ L R+ + H ++ P
Sbjct: 273 PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 332
Query: 571 PVPKH 575
P H
Sbjct: 333 QTPLH 337
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
Y +L +G GG S+V + + K+Q Y + +N + +++ + ++ + N K
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYA---IKYVNLEEADNQTLDSYRNEIAYLN--KLQ 112
Query: 349 DHP-RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKY 407
H ++++LYD +EI V+E C DL+ +LK+ K+I E +S ++ A+
Sbjct: 113 QHSDKIIRLYD-YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 408 LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGT 467
+++ ++H DLKP N L+ +G +K+ DFG++ M PD + G
Sbjct: 171 IHQ--HGIVHSDLKPANFLIVDG----MLKLIDFGIANQM-----QPDTTSVVKDSQVGA 219
Query: 468 YWYLPPECFV-------VGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
Y+PPE GK+ KIS K DVWS+G I Y YGK PF +Q + L
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 279
Query: 521 NTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I E++F + P + + ++ CL + RI + L H Y+Q
Sbjct: 280 -IIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 71 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 128
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + DL GT YLPP
Sbjct: 129 -VIHRDIKPENLLLGSA---GELKIADFGWSV-----HAPSSRRTDL----CGTLDYLPP 175
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 176 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 225
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 74 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 131
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P + GT YLPP
Sbjct: 132 -VIHRDIKPENLLLGSA---GELKIADFGWSV------HAPS---SRRAALCGTLDYLPP 178
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 179 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 228
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 229 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 138/317 (43%), Gaps = 39/317 (12%)
Query: 272 HNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKK 331
H + + + ++ D + +LG G +V + F+ + Q A K+ Q
Sbjct: 1 HVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ---------- 50
Query: 332 ANYIKHALREYNIH-KALDHPRVVKLYDVFE-IDANSFC--TVLEYCDGHDLDFYLKQH- 386
A RE +H +A P +V++ DV+E + A C V+E DG +L ++
Sbjct: 51 --DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRG 108
Query: 387 -KTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
+ EREA I+ + A++YL+ I + H D+KP N+L T +K+TDFG +K
Sbjct: 109 DQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 166
Query: 446 VMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGK 505
N LT+ Y Y+ PE V+G P K D+WS+GVI Y L G
Sbjct: 167 ETTSHN-------SLTTPCYTPY-YVAPE--VLG--PEKYDKSCDMWSLGVIMYILLCGY 214
Query: 506 KPFGHNQSQATILEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLA 563
PF N A T ++ + +F N VS E K IR+ L R+ +
Sbjct: 215 PPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFM 274
Query: 564 RHDYLQ-----PPVPKH 575
H ++ P P H
Sbjct: 275 NHPWIMQSTKVPQTPLH 291
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 29/289 (10%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
Y +L +G GG S+V + + K+Q Y + +N + +++ + ++ + N K
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYA---IKYVNLEEADNQTLDSYRNEIAYLN--KLQ 68
Query: 349 DHP-RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKY 407
H ++++LYD +EI V+E C DL+ +LK+ K+I E +S ++ A+
Sbjct: 69 QHSDKIIRLYD-YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 126
Query: 408 LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGT 467
+++ ++H DLKP N L+ +G +K+ DFG++ M PD + GT
Sbjct: 127 IHQ--HGIVHSDLKPANFLIVDG----MLKLIDFGIANQM-----QPDTTSVVKDSQVGT 175
Query: 468 YWYLPPECFV-------VGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
Y+PPE GK+ KIS K DVWS+G I Y YGK PF +Q + L
Sbjct: 176 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 235
Query: 521 NTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I E++F + P + + ++ CL + RI + L H Y+Q
Sbjct: 236 -IIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 139/319 (43%), Gaps = 39/319 (12%)
Query: 270 RIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKED 329
+ H + + + ++ D + +LG G +V + F+ + Q A K+ Q
Sbjct: 1 QFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------- 52
Query: 330 KKANYIKHALREYNIH-KALDHPRVVKLYDVFE-IDANSFC--TVLEYCDGHDLDFYLKQ 385
A RE +H +A P +V++ DV+E + A C V+E DG +L ++
Sbjct: 53 ----DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD 108
Query: 386 H--KTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGL 443
+ EREA I+ + A++YL+ I + H D+KP N+L T +K+TDFG
Sbjct: 109 RGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGF 166
Query: 444 SKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLY 503
+K N LT+ Y Y+ PE V+G P K D+WS+GVI Y L
Sbjct: 167 AKETTSHN-------SLTTPCYTPY-YVAPE--VLG--PEKYDKSCDMWSLGVIMYILLC 214
Query: 504 GKKPFGHNQSQATILEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVIS 561
G PF N A T ++ + +F N VS E K IR+ L R+ +
Sbjct: 215 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 274
Query: 562 LARHDYLQ-----PPVPKH 575
H ++ P P H
Sbjct: 275 FMNHPWIMQSTKVPQTPLH 293
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 74
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 75 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 132
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P + GT YLPP
Sbjct: 133 -VIHRDIKPENLLL---GSAGELKIADFGWSV------HAPS---SRRTTLCGTLDYLPP 179
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 180 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 229
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 230 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 264
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 138/318 (43%), Gaps = 39/318 (12%)
Query: 271 IHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDK 330
H + + + ++ D + +LG G +V + F+ + Q A K+ Q
Sbjct: 1 FHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------- 51
Query: 331 KANYIKHALREYNIH-KALDHPRVVKLYDVFE-IDANSFC--TVLEYCDGHDLDFYLKQH 386
A RE +H +A P +V++ DV+E + A C V+E DG +L ++
Sbjct: 52 ---DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR 108
Query: 387 --KTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLS 444
+ EREA I+ + A++YL+ I + H D+KP N+L T +K+TDFG +
Sbjct: 109 GDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFA 166
Query: 445 KVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYG 504
K N LT+ Y Y+ PE V+G P K D+WS+GVI Y L G
Sbjct: 167 KETTSHN-------SLTTPCYTPY-YVAPE--VLG--PEKYDKSCDMWSLGVIMYILLCG 214
Query: 505 KKPFGHNQSQATILEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISL 562
PF N A T ++ + +F N VS E K IR+ L R+ +
Sbjct: 215 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 274
Query: 563 ARHDYLQ-----PPVPKH 575
H ++ P P H
Sbjct: 275 MNHPWIMQSTKVPQTPLH 292
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 69
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 70 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 127
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P + GT YLPP
Sbjct: 128 -VIHRDIKPENLLL---GSAGELKIADFGWSV------HAPS---SRRTTLCGTLDYLPP 174
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 175 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 224
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 225 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 71 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 128
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P + GT YLPP
Sbjct: 129 -VIHRDIKPENLLLGSA---GELKIADFGWSV------HAPS---SRRAALCGTLDYLPP 175
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 176 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 225
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 72
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 73 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 130
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P GT YLPP
Sbjct: 131 -VIHRDIKPENLLLGSA---GELKIADFGWSV------HAPS---SRRXXLCGTLDYLPP 177
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 178 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 227
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 228 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 128/276 (46%), Gaps = 31/276 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVL-----FKTQLEKAGVEHQLRREVEIQSHLRHPNI 74
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 75 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR- 132
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P + GT YLPP
Sbjct: 133 -VIHRDIKPENLLLGSN---GELKIADFGWSV------HAPS---SRRTTLCGTLDYLPP 179
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L G PF + Q T + + V+F
Sbjct: 180 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGMPPFEAHTYQ------ETYRRISRVEFTF 229
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
V+ A+ I L + R+ + + H +++
Sbjct: 230 PDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 71 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 128
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P + GT YLPP
Sbjct: 129 -VIHRDIKPENLLL---GSAGELKIADFGWSV------HAPS---SRRTXLCGTLDYLPP 175
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 176 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 225
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 29/289 (10%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
Y +L +G GG S+V + + K+Q Y + +N + +++ + ++ + N K
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYA---IKYVNLEEADNQTLDSYRNEIAYLN--KLQ 64
Query: 349 DHP-RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKY 407
H ++++LYD +EI V+E C DL+ +LK+ K+I E +S ++ A+
Sbjct: 65 QHSDKIIRLYD-YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 122
Query: 408 LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGT 467
+++ ++H DLKP N L+ +G +K+ DFG++ M PD + GT
Sbjct: 123 IHQ--HGIVHSDLKPANFLIVDG----MLKLIDFGIANQM-----QPDTTSVVKDSQVGT 171
Query: 468 YWYLPPECFV-------VGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
Y+PPE GK+ KIS K DVWS+G I Y YGK PF +Q + L
Sbjct: 172 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 231
Query: 521 NTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I E++F + P + + ++ CL + RI + L H Y+Q
Sbjct: 232 -IIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 74 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 131
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P + GT YLPP
Sbjct: 132 -VIHRDIKPENLLL---GSAGELKIADFGWSV------HAPS---SRRTTLCGTLDYLPP 178
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 179 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 228
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 229 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 147/314 (46%), Gaps = 32/314 (10%)
Query: 258 IGYKNLHIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVAC 317
+G +NL+ + +K+ E +R N D + ++ LG G F +V+KA + + A
Sbjct: 13 LGTENLYFQSMKQY--EHVTRDLNP---EDFWEIIGELGDGAFGKVYKAQNKETSVLAAA 67
Query: 318 KVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGH 377
KV + K ++ + E +I + DHP +VKL D F + N+ ++E+C G
Sbjct: 68 KV-------IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE-NNLWILIEFCAGG 119
Query: 378 DLD-FYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEI 436
+D L+ + + E + + + Q + AL YL++ K +IH DLK GNIL T + G+I
Sbjct: 120 AVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFT---LDGDI 174
Query: 437 KITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFV--VGKNPPKISSKVDVWSV 494
K+ DFG+S +N D GT +++ PE + K+ P K DVWS+
Sbjct: 175 KLADFGVSA----KNTRTIQRRD---SFIGTPYWMAPEVVMCETSKDRP-YDYKADVWSL 226
Query: 495 GVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKE 554
G+ + + P +L+ I K+ A S+ K F++ CL +
Sbjct: 227 GITLIEMAEIEPPHHELNPMRVLLK---IAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVD 283
Query: 555 DRIDVISLARHDYL 568
R L +H ++
Sbjct: 284 ARWTTSQLLQHPFV 297
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 146/314 (46%), Gaps = 32/314 (10%)
Query: 258 IGYKNLHIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVAC 317
+G +NL+ + +K+ E +R N D + ++ LG G F +V+KA + + A
Sbjct: 13 LGTENLYFQSMKQY--EHVTRDLNP---EDFWEIIGELGDGAFGKVYKAQNKETSVLAAA 67
Query: 318 KVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGH 377
KV + K ++ + E +I + DHP +VKL D F + N+ ++E+C G
Sbjct: 68 KV-------IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE-NNLWILIEFCAGG 119
Query: 378 DLD-FYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEI 436
+D L+ + + E + + + Q + AL YL++ K +IH DLK GNIL T + G+I
Sbjct: 120 AVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFT---LDGDI 174
Query: 437 KITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFV--VGKNPPKISSKVDVWSV 494
K+ DFG+S D + GT +++ PE + K+ P K DVWS+
Sbjct: 175 KLADFGVSAKNTRXIQRRDSFI-------GTPYWMAPEVVMCETSKDRP-YDYKADVWSL 226
Query: 495 GVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKE 554
G+ + + P +L+ I K+ A S+ K F++ CL +
Sbjct: 227 GITLIEMAEIEPPHHELNPMRVLLK---IAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVD 283
Query: 555 DRIDVISLARHDYL 568
R L +H ++
Sbjct: 284 ARWTTSQLLQHPFV 297
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 138/317 (43%), Gaps = 39/317 (12%)
Query: 272 HNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKK 331
H + + + ++ D + +LG G +V + F+ + Q A K+ Q
Sbjct: 1 HVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ---------- 50
Query: 332 ANYIKHALREYNIH-KALDHPRVVKLYDVFE-IDANSFC--TVLEYCDGHDLDFYLKQH- 386
A RE +H +A P +V++ DV+E + A C V+E DG +L ++
Sbjct: 51 --DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRG 108
Query: 387 -KTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
+ EREA I+ + A++YL+ I + H D+KP N+L T +K+TDFG +K
Sbjct: 109 DQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 166
Query: 446 VMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGK 505
N ++ T +Y+ PE V+G P K D+WS+GVI Y L G
Sbjct: 167 ETTSHNS--------LTEPCYTPYYVAPE--VLG--PEKYDKSCDMWSLGVIMYILLCGY 214
Query: 506 KPFGHNQSQATILEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLA 563
PF N A T ++ + +F N VS E K IR+ L R+ +
Sbjct: 215 PPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFM 274
Query: 564 RHDYLQ-----PPVPKH 575
H ++ P P H
Sbjct: 275 NHPWIMQSTKVPQTPLH 291
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 146/314 (46%), Gaps = 32/314 (10%)
Query: 258 IGYKNLHIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVAC 317
+G +NL+ + +K+ E +R N D + ++ LG G F +V+KA + + A
Sbjct: 13 LGTENLYFQSMKQY--EHVTRDLNP---EDFWEIIGELGDGAFGKVYKAQNKETSVLAAA 67
Query: 318 KVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGH 377
KV + K ++ + E +I + DHP +VKL D F + N+ ++E+C G
Sbjct: 68 KV-------IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE-NNLWILIEFCAGG 119
Query: 378 DLD-FYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEI 436
+D L+ + + E + + + Q + AL YL++ K +IH DLK GNIL T + G+I
Sbjct: 120 AVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFT---LDGDI 174
Query: 437 KITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFV--VGKNPPKISSKVDVWSV 494
K+ DFG+S D + GT +++ PE + K+ P K DVWS+
Sbjct: 175 KLADFGVSAKNTRXIQRRDXFI-------GTPYWMAPEVVMCETSKDRP-YDYKADVWSL 226
Query: 495 GVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKE 554
G+ + + P +L+ I K+ A S+ K F++ CL +
Sbjct: 227 GITLIEMAEIEPPHHELNPMRVLLK---IAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVD 283
Query: 555 DRIDVISLARHDYL 568
R L +H ++
Sbjct: 284 ARWTTSQLLQHPFV 297
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 67
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 68 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 125
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P + GT YLPP
Sbjct: 126 -VIHRDIKPENLLLGSA---GELKIADFGWSV------HAPS---SRRTTLCGTLDYLPP 172
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 173 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 222
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 223 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 257
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 29/259 (11%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
++ + +LG G FSEV + A K + + +++ N E + K +
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN-------EIAVLKKI 63
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYL 408
H +V L D++E + V++ G +L + + E++A ++ QV+SA+KYL
Sbjct: 64 KHENIVTLEDIYE-STTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYL 122
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+E ++H DLKP N+L +I ITDFGLSK+ E+N + S GT
Sbjct: 123 HE--NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQN-------GIMSTACGTP 171
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATE 528
Y+ PE V+ + P S VD WS+GVI Y L G PF + ++++ + E+ +K
Sbjct: 172 GYVAPE--VLAQKP--YSKAVDCWSIGVITYILLCGYPPF-YEETESKLFEK---IKEGY 223
Query: 529 VQFANK--PTVSNEAKGFI 545
+F + +S AK FI
Sbjct: 224 YEFESPFWDDISESAKDFI 242
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 112/228 (49%), Gaps = 27/228 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHALREYNIHKALDH 350
LGKGGF++ + D + A K+ L K + +K + E +IH++L H
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS-------MEISIHRSLAH 80
Query: 351 PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNE 410
VV + FE D + VLE C L K+ K + E EAR + Q+V +YL+
Sbjct: 81 QHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 139
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
+ VIH DLK GN+ L E E+KI DFGL+ ++ Y+ + L GT Y
Sbjct: 140 NR--VIHRDLKLGNLFLNEDL---EVKIGDFGLATKVE---YDGERKKTL----CGTPNY 187
Query: 471 LPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
+ PE V+ K S +VDVWS+G I Y L GK PF + + T L
Sbjct: 188 IAPE--VLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 231
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + +A KV +K + ++H LR E I L HP +
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F D+ +LEY + L++ E+ + + ++ +AL Y + K
Sbjct: 71 LRLYGYFH-DSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK- 128
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P + GT YLPP
Sbjct: 129 -VIHRDIKPENLLLGSA---GELKIADFGWSV------HAPS---SRRAALCGTLDYLPP 175
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q +T + + V+F
Sbjct: 176 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------DTYKRISRVEFTF 225
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 71 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 128
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P GT YLPP
Sbjct: 129 -VIHRDIKPENLLL---GSAGELKIADFGWSV------HAPS---SRRXXLCGTLDYLPP 175
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 176 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 225
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 112/228 (49%), Gaps = 27/228 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHALREYNIHKALDH 350
LGKGGF++ + D + A K+ L K + +K + E +IH++L H
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS-------MEISIHRSLAH 76
Query: 351 PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNE 410
VV + FE D + VLE C L K+ K + E EAR + Q+V +YL+
Sbjct: 77 QHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 135
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
+ VIH DLK GN+ L E E+KI DFGL+ ++ Y+ + L GT Y
Sbjct: 136 NR--VIHRDLKLGNLFLNEDL---EVKIGDFGLATKVE---YDGERKKTL----CGTPNY 183
Query: 471 LPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
+ PE V+ K S +VDVWS+G I Y L GK PF + + T L
Sbjct: 184 IAPE--VLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 227
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 74 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 131
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI DFG S + P GT YLPP
Sbjct: 132 -VIHRDIKPENLLL---GSAGELKIADFGWSV------HAPS---SRRXXLCGTLDYLPP 178
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 179 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 228
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 229 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 72
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 73 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 130
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI +FG S + P + GT YLPP
Sbjct: 131 -VIHRDIKPENLLLGSA---GELKIANFGWSV------HAPS---SRRTTLCGTLDYLPP 177
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 178 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 227
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 228 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 112/228 (49%), Gaps = 27/228 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHALREYNIHKALDH 350
LGKGGF++ + D + A K+ L K + +K + E +IH++L H
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS-------MEISIHRSLAH 76
Query: 351 PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNE 410
VV + FE D + VLE C L K+ K + E EAR + Q+V +YL+
Sbjct: 77 QHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 135
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
+ VIH DLK GN+ L E E+KI DFGL+ ++ Y+ + L GT Y
Sbjct: 136 NR--VIHRDLKLGNLFLNEDL---EVKIGDFGLATKVE---YDGERKKTL----CGTPNY 183
Query: 471 LPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
+ PE V+ K S +VDVWS+G I Y L GK PF + + T L
Sbjct: 184 IAPE--VLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 227
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + + + +A KV +K + ++H LR E I L HP +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY F DA +LEY + L++ E+ + + ++ +AL Y + +
Sbjct: 74 LRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR- 131
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH D+KP N+LL GE+KI +FG S + P + GT YLPP
Sbjct: 132 -VIHRDIKPENLLLGSA---GELKIANFGWSV------HAPS---SRRTTLCGTLDYLPP 178
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFAN 533
E + G+ KVD+WS+GV+ Y+ L GK PF N Q T + + V+F
Sbjct: 179 E-MIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFTF 228
Query: 534 KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
V+ A+ I L + R + + H ++
Sbjct: 229 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 112/228 (49%), Gaps = 27/228 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHALREYNIHKALDH 350
LGKGGF++ + D + A K+ L K + +K + E +IH++L H
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS-------MEISIHRSLAH 100
Query: 351 PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNE 410
VV + FE D + VLE C L K+ K + E EAR + Q+V +YL+
Sbjct: 101 QHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 159
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
+ VIH DLK GN+ L E E+KI DFGL+ ++ Y+ + L GT Y
Sbjct: 160 NR--VIHRDLKLGNLFLNEDL---EVKIGDFGLATKVE---YDGERKKVL----CGTPNY 207
Query: 471 LPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
+ PE V+ K S +VDVWS+G I Y L GK PF + + T L
Sbjct: 208 IAPE--VLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 251
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 112/228 (49%), Gaps = 27/228 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHALREYNIHKALDH 350
LGKGGF++ + D + A K+ L K + +K + E +IH++L H
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS-------MEISIHRSLAH 98
Query: 351 PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNE 410
VV + FE D + VLE C L K+ K + E EAR + Q+V +YL+
Sbjct: 99 QHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 157
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
+ VIH DLK GN+ L E E+KI DFGL+ ++ Y+ + L GT Y
Sbjct: 158 NR--VIHRDLKLGNLFLNEDL---EVKIGDFGLATKVE---YDGERKKVL----CGTPNY 205
Query: 471 LPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
+ PE V+ K S +VDVWS+G I Y L GK PF + + T L
Sbjct: 206 IAPE--VLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 249
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 124/283 (43%), Gaps = 29/283 (10%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
Y L +G+G + EV A + A K ++ K + ED + +E I K+L
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAK--KIPKYFVED-----VDRFKQEIEIMKSL 80
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYL 408
DHP +++LY+ FE D V+E C G +L + + E +A I+ V+SA+ Y
Sbjct: 81 DHPNIIRLYETFE-DNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYC 139
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+++ V H DLKP N L + +K+ DFGL+ + P M GT
Sbjct: 140 HKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAA-----RFKPGKMM---RTKVGTP 189
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATE 528
+Y+ P+ P + D WS GV+ Y L G PF +L+ ++
Sbjct: 190 YYVSPQVLEGLYGP-----ECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLK----IREGT 240
Query: 529 VQFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
F K VS +A+ IR L + RI + H++ +
Sbjct: 241 FTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFE 283
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 124/283 (43%), Gaps = 29/283 (10%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
Y L +G+G + EV A + A K ++ K + ED + +E I K+L
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAK--KIPKYFVED-----VDRFKQEIEIMKSL 63
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYL 408
DHP +++LY+ FE D V+E C G +L + + E +A I+ V+SA+ Y
Sbjct: 64 DHPNIIRLYETFE-DNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYC 122
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+++ V H DLKP N L + +K+ DFGL+ + P M GT
Sbjct: 123 HKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAA-----RFKPGKMM---RTKVGTP 172
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATE 528
+Y+ P+ P + D WS GV+ Y L G PF +L+ ++
Sbjct: 173 YYVSPQVLEGLYGP-----ECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLK----IREGT 223
Query: 529 VQFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
F K VS +A+ IR L + RI + H++ +
Sbjct: 224 FTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFE 266
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 126/291 (43%), Gaps = 28/291 (9%)
Query: 282 HPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
H + D Y + LG G F VH+ + A K + + DK+ +E
Sbjct: 46 HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKF--VMTPHESDKET-----VRKE 98
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQ 400
L HP +V L+D FE D N + E+ G +L + +H ++E EA + Q
Sbjct: 99 IQTMSVLRHPTLVNLHDAFE-DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ 157
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
V L +++E +H DLKP NI+ T E+K+ DFGL+ +D P + +
Sbjct: 158 VCKGLCHMHENN--YVHLDLKPENIMFTTKR-SNELKLIDFGLTAHLD-----PKQSVKV 209
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
T+ GT + PE V + P + D+WSVGV+ Y L G PFG T+
Sbjct: 210 TT---GTAEFAAPE---VAEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 262
Query: 521 NTI-LKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQP 570
+ + F+ +S + K FIR L R+ + H +L P
Sbjct: 263 KSCDWNMDDSAFSG---ISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP 310
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 112/228 (49%), Gaps = 27/228 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHALREYNIHKALDH 350
LGKGGF++ + D + A K+ L K + +K + E +IH++L H
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS-------MEISIHRSLAH 74
Query: 351 PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNE 410
VV + FE D + VLE C L K+ K + E EAR + Q+V +YL+
Sbjct: 75 QHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 133
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
+ VIH DLK GN+ L E E+KI DFGL+ ++ Y+ + L GT Y
Sbjct: 134 NR--VIHRDLKLGNLFLNEDL---EVKIGDFGLATKVE---YDGERKKVL----CGTPNY 181
Query: 471 LPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
+ PE V+ K S +VDVWS+G I Y L GK PF + + T L
Sbjct: 182 IAPE--VLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 225
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 129/291 (44%), Gaps = 25/291 (8%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
+ D Y L ++GKG FS V + + + + A K+ + K + + RE +
Sbjct: 21 LFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST--EDLKREAS 78
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK----TIAEREARSIVM 399
I L HP +V+L + + D + V E+ DG DL F + + +E A +
Sbjct: 79 ICHMLKHPHIVELLETYSSDGMLY-MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q++ AL+Y ++ +IH D+KP N+LL +K+ DFG++ + E
Sbjct: 138 QILEALRYCHDNN--IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG-------- 187
Query: 460 LTSQG-AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
L + G GT ++ PE VV + P VDVW GVI + L G PF + + L
Sbjct: 188 LVAGGRVGTPHFMAPE--VVKREP--YGKPVDVWGCGVILFILLSGCLPFYGTKER---L 240
Query: 519 EENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
E I ++ +S AK +R L +RI V H +L+
Sbjct: 241 FEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 126/295 (42%), Gaps = 36/295 (12%)
Query: 282 HPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKV----HQLNKDWKEDKKANYIKH 337
H + D Y + LG G F VH+ + A K H+ +K+
Sbjct: 152 HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE-----------T 200
Query: 338 ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARS 396
+E L HP +V L+D FE D N + E+ G +L + +H ++E EA
Sbjct: 201 VRKEIQTMSVLRHPTLVNLHDAFE-DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE 259
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
+ QV L +++E +H DLKP NI+ T E+K+ DFGL+ +D P
Sbjct: 260 YMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKR-SNELKLIDFGLTAHLD-----PKQ 311
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQAT 516
+ +T+ GT + PE V + P + D+WSVGV+ Y L G PFG T
Sbjct: 312 SVKVTT---GTAEFAAPE---VAEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDET 364
Query: 517 ILEENTI-LKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQP 570
+ + + F+ +S + K FIR L R+ + H +L P
Sbjct: 365 LRNVKSCDWNMDDSAFSG---ISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP 416
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 31/272 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G G + V A D + VA K K ++ + + K A RE + K + H V+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIK-----KLYRPFQSELFAKRAYRELRLLKHMRHENVI 87
Query: 355 KLYDVFEIDAN-----SFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
L DVF D F V+ + G DL +K H+ + E + +V Q++ L+Y++
Sbjct: 88 GLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIH 145
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
+IH DLKPGN+ + E C E+KI DFGL++ D E T W
Sbjct: 146 AAG--IIHRDLKPGNLAVNED--C-ELKILDFGLARQADSEMXG----------XVVTRW 190
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEV 529
Y PE + N + + VD+WSVG I + + GK F + + E +
Sbjct: 191 YRAPEVIL---NWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPA 247
Query: 530 QFANKPTVSNEAKGFIRSCLAYRKEDRIDVIS 561
+F + S+EAK +++ K+D +++
Sbjct: 248 EFVQR-LQSDEAKNYMKGLPELEKKDFASILT 278
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 41/287 (14%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
++++RY ++ LG GG S V+ A D VA K + KE+ +K RE +
Sbjct: 8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEET----LKRFEREVH 63
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
L H +V + DV E D + + V+EY +G L Y++ H ++ A + Q++
Sbjct: 64 NSSQLSHQNIVSMIDVDEED-DCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILD 122
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
+K+ ++++ ++H D+KP NIL+ +KI DFG++K + E + + T+
Sbjct: 123 GIKHAHDMR--IVHRDIKPQNILIDSNKT---LKIFDFGIAKALSETS------LTQTNH 171
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE---- 519
GT Y PE D++S+G++ Y+ L G+ PF + + ++
Sbjct: 172 VLGTVQYFSPE----QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQD 227
Query: 520 -----------------ENTILKATEVQFANKPTVSNEAKGFIRSCL 549
N IL+ATE AN+ E K + S L
Sbjct: 228 SVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 135/299 (45%), Gaps = 27/299 (9%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREY-NIHKALDHPR 352
LLG+G +++V A L+ + A K+ E + + RE +++ +
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKI-------IEKQAGHSRSRVFREVETLYQCQGNKN 72
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIK 412
+++L + FE D F V E G + ++++ K EREA +V V +AL +L+
Sbjct: 73 ILELIEFFE-DDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLH--T 129
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEEN-YNPDHGMDLTSQGAGTYWYL 471
+ H DLKP NIL +KI DF L M N P +LT+ G+ Y+
Sbjct: 130 KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTP-CGSAEYM 188
Query: 472 PPECFVVGKNPPKISSK-VDVWSVGVIFYQCLYGKKPF--------GHNQSQATILEENT 522
PE V + K D+WS+GV+ Y L G PF G ++ + + +N
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNK 248
Query: 523 ILKATE---VQFANKPT--VSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKHG 576
+ ++ + +F +K +S+EAK I L + R+ + +H ++Q P+ G
Sbjct: 249 LFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQAPEKG 307
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 25/188 (13%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++ +V
Sbjct: 418 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 475
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM-DEENYNPDHG 457
QV +KYL E +H DL N+LL + KI+DFGLSK + +ENY
Sbjct: 476 HQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENY----- 525
Query: 458 MDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF-GHNQ 512
+Q G + WY PEC N K SSK DVWS GV+ ++ YG+KP+ G
Sbjct: 526 --YKAQTHGKWPVKWY-APECI----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 578
Query: 513 SQATILEE 520
S+ T + E
Sbjct: 579 SEVTAMLE 586
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 25/188 (13%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++ +V
Sbjct: 419 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 476
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM-DEENYNPDHG 457
QV +KYL E +H DL N+LL + KI+DFGLSK + +ENY
Sbjct: 477 HQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENY----- 526
Query: 458 MDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF-GHNQ 512
+Q G + WY PEC N K SSK DVWS GV+ ++ YG+KP+ G
Sbjct: 527 --YKAQTHGKWPVKWY-APECI----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 579
Query: 513 SQATILEE 520
S+ T + E
Sbjct: 580 SEVTAMLE 587
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 106/225 (47%), Gaps = 28/225 (12%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG GGF V + VA K + +E N + L E I K L+HP VV
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCR-----QELSPKNRERWCL-EIQIMKKLNHPNVV 75
Query: 355 KLYDVFE----IDANSF-CTVLEYCDGHDLDFYLKQHKT---IAEREARSIVMQVVSALK 406
+V + + N +EYC+G DL YL Q + + E R+++ + SAL+
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+E + +IH DLKP NI+L G KI D G +K +D+ +L ++ G
Sbjct: 136 YLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG--------ELCTEFVG 185
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHN 511
T YL PE K + VD WS G + ++C+ G +PF N
Sbjct: 186 TLQYLAPELL----EQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 106/225 (47%), Gaps = 28/225 (12%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG GGF V + VA K + +E N + L E I K L+HP VV
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCR-----QELSPKNRERWCL-EIQIMKKLNHPNVV 76
Query: 355 KLYDVFE----IDANSF-CTVLEYCDGHDLDFYLKQHKT---IAEREARSIVMQVVSALK 406
+V + + N +EYC+G DL YL Q + + E R+++ + SAL+
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+E + +IH DLKP NI+L G KI D G +K +D+ +L ++ G
Sbjct: 137 YLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG--------ELCTEFVG 186
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHN 511
T YL PE K + VD WS G + ++C+ G +PF N
Sbjct: 187 TLQYLAPELL----EQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
Y+L LG G F +V VA K+ LN+ ++ + + + RE K
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKI--LNR--QKIRSLDVVGKIKREIQNLKLF 68
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYL 408
HP ++KLY V + F V+EY G +L Y+ +H + E EAR + Q++SA+ Y
Sbjct: 69 RHPHIIKLYQVISTPTDFF-MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYC 127
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+ + V+H DLKP N+LL + KI DFGLS +M + + D G+
Sbjct: 128 H--RHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRD--------SCGSP 174
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
Y PE V +VD+WS GVI Y L G PF
Sbjct: 175 NYAAPE---VISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 110/228 (48%), Gaps = 24/228 (10%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
+ +L LG G F VH RY A KV L K+ K ++H E + +
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKV--LKKEIVVRLKQ--VEHTNDERLMLSIV 63
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYL 408
HP +++++ F+ DA +++Y +G +L L++ + A+ +V AL+YL
Sbjct: 64 THPFIIRMWGTFQ-DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYL 122
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+ +I+ DLKP NILL + G IKITDFG +K Y PD +T GT
Sbjct: 123 H--SKDIIYRDLKPENILLDKN---GHIKITDFGFAK------YVPD----VTYXLCGTP 167
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQAT 516
Y+ PE VV P + +D WS G++ Y+ L G PF + + T
Sbjct: 168 DYIAPE--VVSTKP--YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT 211
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 129/305 (42%), Gaps = 39/305 (12%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
++ D + +LG G +V + F+ + Q A K Q A RE
Sbjct: 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQ------------DCPKARREVE 106
Query: 344 IH-KALDHPRVVKLYDVFE-IDANSFC--TVLEYCDGHDLDFYLKQH--KTIAEREARSI 397
+H +A P +V++ DV+E + A C V E DG +L ++ + EREA I
Sbjct: 107 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEI 166
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ A++YL+ I + H D+KP N+L T +K+TDFG +K N
Sbjct: 167 XKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN------ 218
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATI 517
LT+ Y Y+ PE V+G P K D WS+GVI Y L G PF N A
Sbjct: 219 -SLTTPCYTPY-YVAPE--VLG--PEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAIS 272
Query: 518 LEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ-----P 570
T ++ + +F N VS E K IR+ L R + H ++ P
Sbjct: 273 PGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVP 332
Query: 571 PVPKH 575
P H
Sbjct: 333 QTPLH 337
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 128/271 (47%), Gaps = 31/271 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G FSEV++A L + VA K Q+ +A+ IK E ++ K L+HP V+
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIK----EIDLLKQLNHPNVI 95
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLD----FYLKQHKTIAEREARSIVMQVVSALKYLNE 410
K Y F I+ N VLE D DL + KQ + I ER +Q+ SAL++++
Sbjct: 96 KYYASF-IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS 154
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
+ V+H D+KP N+ +T G +K+ D GL + + H + GT +Y
Sbjct: 155 RR--VMHRDIKPANVFIT---ATGVVKLGDLGLGRFFSSKT-TAAHSL------VGTPYY 202
Query: 471 LPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQ 530
+ PE + +N + K D+WS+G + Y+ + PF ++ L + K +
Sbjct: 203 MSPE--RIHEN--GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK----KIEQCD 254
Query: 531 FANKPT--VSNEAKGFIRSCLAYRKEDRIDV 559
+ P+ S E + + C+ E R DV
Sbjct: 255 YPPLPSDHYSEELRQLVNMCINPDPEKRPDV 285
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 131/261 (50%), Gaps = 24/261 (9%)
Query: 250 PVLSDSYLIGYKNLHIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDL 309
P + Y G I E K N +S + + + LL ++G+G +++V
Sbjct: 15 PTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLK 74
Query: 310 KEQRYVACKV--HQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSF 367
K R A +V +L D D+ ++++ ++ +A +HP +V L+ F+ ++ F
Sbjct: 75 KTDRIYAMRVVKKELVND---DEDIDWVQ--TEKHVFEQASNHPFLVGLHSCFQTESRLF 129
Query: 368 CTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILL 427
V+EY +G DL F++++ + + E AR ++ AL YL+E +I+ DLK N+LL
Sbjct: 130 F-VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE--RGIIYRDLKLDNVLL 186
Query: 428 TEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISS 487
+ G IK+TD+G+ K E P D TS GT Y+ PE + G++
Sbjct: 187 ---DSEGHIKLTDYGMCK----EGLRPG---DTTSTFCGTPNYIAPEI-LRGED---YGF 232
Query: 488 KVDVWSVGVIFYQCLYGKKPF 508
VD W++GV+ ++ + G+ PF
Sbjct: 233 SVDWWALGVLMFEMMAGRSPF 253
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 128/276 (46%), Gaps = 28/276 (10%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
SD Y + LGKG FS V + A K+ K D + RE I
Sbjct: 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-----FQKLEREARI 81
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSA 404
+ L HP +V+L+D + ++ + V + G +L + + +E +A + Q++ +
Sbjct: 82 CRKLQHPNIVRLHDSIQEESFHY-LVFDLVTGGELFEDIVAREFYSEADASHCIQQILES 140
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLS-KVMDEENYNPDHGMDLTSQ 463
+ Y + ++H +LKP N+LL +K+ DFGL+ +V D E + HG
Sbjct: 141 IAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGF----- 190
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
AGT YL PE V+ K+P S VD+W+ GVI Y L G PF ++ Q + +
Sbjct: 191 -AGTPGYLSPE--VLKKDP--YSKPVDIWACGVILYILLVGYPPF-WDEDQHRLYAQ--- 241
Query: 524 LKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
+KA + + TV+ EAK I S L + RI
Sbjct: 242 IKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI 277
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 25/188 (13%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++ +V
Sbjct: 54 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 111
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM-DEENYNPDHG 457
QV +KYL E +H DL N+LL + KI+DFGLSK + +ENY
Sbjct: 112 HQVSMGMKYLEE--SNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENY----- 161
Query: 458 MDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF-GHNQ 512
+Q G + WY PEC N K SSK DVWS GV+ ++ YG+KP+ G
Sbjct: 162 --YKAQTHGKWPVKWY-APECI----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 214
Query: 513 SQATILEE 520
S+ T + E
Sbjct: 215 SEVTAMLE 222
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 103/220 (46%), Gaps = 21/220 (9%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
Y+L LG G F +V VA K+ LN+ ++ + + + RE K
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKI--LNR--QKIRSLDVVGKIKREIQNLKLF 68
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYL 408
HP ++KLY V + F V+EY G +L Y+ +H + E EAR + Q++SA+ Y
Sbjct: 69 RHPHIIKLYQVISTPTDFF-MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYC 127
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+ + V+H DLKP N+LL + KI DFGLS +M + + G+
Sbjct: 128 H--RHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEF--------LRTSCGSP 174
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
Y PE V +VD+WS GVI Y L G PF
Sbjct: 175 NYAAPE---VISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 25/188 (13%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++ +V
Sbjct: 66 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 123
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM-DEENYNPDHG 457
QV +KYL E +H DL N+LL + KI+DFGLSK + +ENY
Sbjct: 124 HQVSMGMKYLEE--SNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENY----- 173
Query: 458 MDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF-GHNQ 512
+Q G + WY PEC N K SSK DVWS GV+ ++ YG+KP+ G
Sbjct: 174 --YKAQTHGKWPVKWY-APECI----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 226
Query: 513 SQATILEE 520
S+ T + E
Sbjct: 227 SEVTAMLE 234
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 25/188 (13%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++ +V
Sbjct: 60 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 117
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM-DEENYNPDHG 457
QV +KYL E +H DL N+LL + KI+DFGLSK + +ENY
Sbjct: 118 HQVSMGMKYLEE--SNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENY----- 167
Query: 458 MDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF-GHNQ 512
+Q G + WY PEC N K SSK DVWS GV+ ++ YG+KP+ G
Sbjct: 168 --YKAQTHGKWPVKWY-APECI----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 220
Query: 513 SQATILEE 520
S+ T + E
Sbjct: 221 SEVTAMLE 228
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 133/306 (43%), Gaps = 37/306 (12%)
Query: 266 RELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKD 325
R+LK++ D+ P + + +L LG+G + V+KA + + VA K + D
Sbjct: 13 RQLKKL---DEDSLTKQP--EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD 67
Query: 326 WKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCD-GHDLDFYLK 384
+E ++E +I + D P VVK Y + V+EYC G D
Sbjct: 68 LQE---------IIKEISIMQQCDSPHVVKYYGSY-FKNTDLWIVMEYCGAGSVSDIIRL 117
Query: 385 QHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLS 444
++KT+ E E +I+ + L+YL+ ++ IH D+K GNILL N G K+ DFG++
Sbjct: 118 RNKTLTEDEIATILQSTLKGLEYLHFMRK--IHRDIKAGNILL---NTEGHAKLADFGVA 172
Query: 445 KVMDEENYNPDHGMDLTSQGAGTYWYLPPECFV-VGKNPPKISSKVDVWSVGVIFYQCLY 503
+ + M + GT +++ PE +G N D+WS+G+ +
Sbjct: 173 GQLTDX-------MAKRNXVIGTPFWMAPEVIQEIGYN-----CVADIWSLGITAIEMAE 220
Query: 504 GKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLA 563
GK P+ I T T F S+ F++ CL E R L
Sbjct: 221 GKPPYADIHPMRAIFMIPTNPPPT---FRKPELWSDNFTDFVKQCLVKSPEQRATATQLL 277
Query: 564 RHDYLQ 569
+H +++
Sbjct: 278 QHPFVR 283
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 25/188 (13%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++ +V
Sbjct: 56 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 113
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM-DEENYNPDHG 457
QV +KYL E +H DL N+LL + KI+DFGLSK + +ENY
Sbjct: 114 HQVSMGMKYLEE--SNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENY----- 163
Query: 458 MDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF-GHNQ 512
+Q G + WY PEC N K SSK DVWS GV+ ++ YG+KP+ G
Sbjct: 164 --YKAQTHGKWPVKWY-APECI----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 216
Query: 513 SQATILEE 520
S+ T + E
Sbjct: 217 SEVTAMLE 224
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 25/188 (13%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++ +V
Sbjct: 74 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 131
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM-DEENYNPDHG 457
QV +KYL E +H DL N+LL + KI+DFGLSK + +ENY
Sbjct: 132 HQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENY----- 181
Query: 458 MDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF-GHNQ 512
+Q G + WY PEC N K SSK DVWS GV+ ++ YG+KP+ G
Sbjct: 182 --YKAQTHGKWPVKWY-APECI----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 234
Query: 513 SQATILEE 520
S+ T + E
Sbjct: 235 SEVTAMLE 242
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 25/188 (13%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++ +V
Sbjct: 76 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 133
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM-DEENYNPDHG 457
QV +KYL E +H DL N+LL + KI+DFGLSK + +ENY
Sbjct: 134 HQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENY----- 183
Query: 458 MDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF-GHNQ 512
+Q G + WY PEC N K SSK DVWS GV+ ++ YG+KP+ G
Sbjct: 184 --YKAQTHGKWPVKWY-APECI----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 236
Query: 513 SQATILEE 520
S+ T + E
Sbjct: 237 SEVTAMLE 244
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 25/188 (13%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++ +V
Sbjct: 76 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 133
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM-DEENYNPDHG 457
QV +KYL E +H DL N+LL + KI+DFGLSK + +ENY
Sbjct: 134 HQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENY----- 183
Query: 458 MDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF-GHNQ 512
+Q G + WY PEC N K SSK DVWS GV+ ++ YG+KP+ G
Sbjct: 184 --YKAQTHGKWPVKWY-APECI----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 236
Query: 513 SQATILEE 520
S+ T + E
Sbjct: 237 SEVTAMLE 244
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 126/274 (45%), Gaps = 26/274 (9%)
Query: 298 GGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLY 357
G F +V+KA + + A KV + K ++ + E +I + DHP +VKL
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKV-------IDTKSEEELEDYMVEIDILASCDHPNIVKLL 73
Query: 358 DVFEIDANSFCTVLEYCDGHDLD-FYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVI 416
D F + N+ ++E+C G +D L+ + + E + + + Q + AL YL++ K +I
Sbjct: 74 DAFYYE-NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK--II 130
Query: 417 HYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECF 476
H DLK GNIL T + G+IK+ DFG+S N + GT +++ PE
Sbjct: 131 HRDLKAGNILFT---LDGDIKLADFGVSA------KNTRTXIQRRDSFIGTPYWMAPEVV 181
Query: 477 V--VGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANK 534
+ K+ P K DVWS+G+ + + P +L+ I K+ A
Sbjct: 182 MCETSKDRP-YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLK---IAKSEPPTLAQP 237
Query: 535 PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
S+ K F++ CL + R L +H ++
Sbjct: 238 SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 271
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 99/189 (52%), Gaps = 27/189 (14%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++ +V
Sbjct: 60 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 117
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDH 456
QV +KYL E +H DL N+LL + KI+DFGLSK + DE Y
Sbjct: 118 HQVSMGMKYLEE--SNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENXYK--- 169
Query: 457 GMDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF-GHN 511
+Q G + WY PEC N K SSK DVWS GV+ ++ YG+KP+ G
Sbjct: 170 -----AQTHGKWPVKWY-APECI----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 219
Query: 512 QSQATILEE 520
S+ T + E
Sbjct: 220 GSEVTAMLE 228
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 132/308 (42%), Gaps = 62/308 (20%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V K + + VA K ++D KK ALRE + K L HP +V
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKI-----ALREIRMLKQLKHPNLV 65
Query: 355 KLYDVFEIDANSFCTVLEYCDG---HDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
L +VF V EYCD H+LD Y + + E +SI Q + A+ + +
Sbjct: 66 NLLEVFR-RKRRLHLVFEYCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCH-- 119
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
K IH D+KP NIL+T+ +V IK+ DFG ++++ + D T WY
Sbjct: 120 KHNCIHRDVKPENILITKHSV---IKLCDFGFARLLTGPS-------DYYDDEVATRWYR 169
Query: 472 PPECFV--VGKNPPKISSKVDVWSVGVIFYQCLYG------------------------- 504
PE V PP VDVW++G +F + L G
Sbjct: 170 SPELLVGDTQYGPP-----VDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIP 224
Query: 505 --KKPFGHNQSQATI-LEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVIS 561
++ F NQ + + + + ++ E++F P +S A G ++ CL +R+
Sbjct: 225 RHQQVFSTNQYFSGVKIPDPEDMEPLELKF---PNISYPALGLLKGCLHMDPTERLTCEQ 281
Query: 562 LARHDYLQ 569
L H Y +
Sbjct: 282 LLHHPYFE 289
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 123/293 (41%), Gaps = 33/293 (11%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
SDRY L+ +G G F D + VA K + + E+ K RE H
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVK--------REIINH 69
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++L HP +V+ +V + V+EY G +L + +E EAR Q++S +
Sbjct: 70 RSLRHPNIVRFKEVI-LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ-- 463
Y + ++ V H DLK N LL +G+ +KI DFG SK L SQ
Sbjct: 129 SYAHAMQ--VAHRDLKLENTLL-DGSPAPRLKIADFGYSK-----------ASVLHSQPK 174
Query: 464 -GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENT 522
GT Y+ PE + + K++ DVWS GV Y L G PF + T
Sbjct: 175 SAVGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYPFEDPEEPKNF--RKT 229
Query: 523 ILKATEVQFA--NKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVP 573
I + VQ+A + +S E + I RI + + H++ +P
Sbjct: 230 IHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLP 282
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 117/220 (53%), Gaps = 24/220 (10%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKV--HQLNKDWKEDKKANYIKHALREYNIHKAL 348
LL ++G+G +++V K R A KV +L D D+ ++++ ++ +A
Sbjct: 24 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND---DEDIDWVQT--EKHVFEQAS 78
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYL 408
+HP +V L+ F+ ++ F V+EY +G DL F++++ + + E AR ++ AL YL
Sbjct: 79 NHPFLVGLHSCFQTESRLF-FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 137
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+E +I+ DLK N+LL G IK+TD+G+ K E P D TS GT
Sbjct: 138 HE--RGIIYRDLKLDNVLLDSE---GHIKLTDYGMCK----EGLRPG---DTTSXFCGTP 185
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
Y+ PE + G++ VD W++GV+ ++ + G+ PF
Sbjct: 186 NYIAPEI-LRGED---YGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 120/270 (44%), Gaps = 25/270 (9%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
+ LL +LGKGG+ +V + + ++ K + A H E NI + +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYL 408
HP +V L F+ + +LEY G +L L++ E A + ++ AL +L
Sbjct: 79 KHPFIVDLIYAFQTGGKLYL-ILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHL 137
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
++ +I+ DLKP NI+L N G +K+TDFGL K H +T GT
Sbjct: 138 HQ--KGIIYRDLKPENIML---NHQGHVKLTDFGLCK-------ESIHDGTVTHXFCGTI 185
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATILEENTILKAT 527
Y+ PE + + + VD WS+G + Y L G PF G N+ + TI K
Sbjct: 186 EYMAPEILMRSGH----NRAVDWWSLGALMYDMLTGAPPFTGENRKK-------TIDKIL 234
Query: 528 EVQFANKPTVSNEAKGFIRSCLAYRKEDRI 557
+ + P ++ EA+ ++ L R+
Sbjct: 235 KCKLNLPPYLTQEARDLLKKLLKRNAASRL 264
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 120/270 (44%), Gaps = 25/270 (9%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
+ LL +LGKGG+ +V + + ++ K + A H E NI + +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYL 408
HP +V L F+ + +LEY G +L L++ E A + ++ AL +L
Sbjct: 79 KHPFIVDLIYAFQTGGKLYL-ILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHL 137
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
++ +I+ DLKP NI+L N G +K+TDFGL K H +T GT
Sbjct: 138 HQ--KGIIYRDLKPENIML---NHQGHVKLTDFGLCK-------ESIHDGTVTHTFCGTI 185
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATILEENTILKAT 527
Y+ PE + + + VD WS+G + Y L G PF G N+ + TI K
Sbjct: 186 EYMAPEILMRSGH----NRAVDWWSLGALMYDMLTGAPPFTGENRKK-------TIDKIL 234
Query: 528 EVQFANKPTVSNEAKGFIRSCLAYRKEDRI 557
+ + P ++ EA+ ++ L R+
Sbjct: 235 KCKLNLPPYLTQEARDLLKKLLKRNAASRL 264
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 117/220 (53%), Gaps = 24/220 (10%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKV--HQLNKDWKEDKKANYIKHALREYNIHKAL 348
LL ++G+G +++V K R A KV +L D D+ ++++ ++ +A
Sbjct: 9 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND---DEDIDWVQ--TEKHVFEQAS 63
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYL 408
+HP +V L+ F+ ++ F V+EY +G DL F++++ + + E AR ++ AL YL
Sbjct: 64 NHPFLVGLHSCFQTESRLFF-VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 122
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+E +I+ DLK N+LL G IK+TD+G+ K E P D TS GT
Sbjct: 123 HE--RGIIYRDLKLDNVLLDSE---GHIKLTDYGMCK----EGLRPG---DTTSXFCGTP 170
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
Y+ PE + G++ VD W++GV+ ++ + G+ PF
Sbjct: 171 NYIAPEI-LRGED---YGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 143/309 (46%), Gaps = 52/309 (16%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANY------------ 334
++Y L +GKG + V A++ + Y A KV L+K K ++A +
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKV--LSKK-KLIRQAGFPRRPPPRGTRPA 69
Query: 335 ----------IKHALREYNIHKALDHPRVVKLYDVFEIDANS--FCTVLEYCDGHDLDFY 382
I+ +E I K LDHP VVKL +V + D N V E + +
Sbjct: 70 PGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLD-DPNEDHLYMVFELVNQGPV-ME 127
Query: 383 LKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFG 442
+ K ++E +AR ++ ++YL+ K +IH D+KP N+L+ E G IKI DFG
Sbjct: 128 VPTLKPLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLLVGED---GHIKIADFG 182
Query: 443 LSKVMDEENYNPDHGMD-LTSQGAGTYWYLPPECFVVGKNPPKISS--KVDVWSVGVIFY 499
+S N G D L S GT ++ PE KI S +DVW++GV Y
Sbjct: 183 VS--------NEFKGSDALLSNTVGTPAFMAPESL---SETRKIFSGKALDVWAMGVTLY 231
Query: 500 QCLYGKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDV 559
++G+ PF + I+ ++ +K+ ++F ++P ++ + K I L E RI V
Sbjct: 232 CFVFGQCPFMDER----IMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVV 287
Query: 560 ISLARHDYL 568
+ H ++
Sbjct: 288 PEIKLHPWV 296
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 128/276 (46%), Gaps = 28/276 (10%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
SD Y + LGKG FS V + A K+ K A + RE I
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-----LSARDFQKLEREARI 58
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSA 404
+ L HP +V+L+D + ++ + V + G +L + + +E +A + Q++ +
Sbjct: 59 CRKLQHPNIVRLHDSIQEESFHY-LVFDLVTGGELFEDIVAREFYSEADASHCIQQILES 117
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLS-KVMDEENYNPDHGMDLTSQ 463
+ Y + ++H +LKP N+LL +K+ DFGL+ +V D E + HG
Sbjct: 118 IAYCH--SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGF----- 167
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
AGT YL PE V+ K+P S VD+W+ GVI Y L G PF ++ Q + +
Sbjct: 168 -AGTPGYLSPE--VLKKDP--YSKPVDIWACGVILYILLVGYPPFW-DEDQHRLYAQ--- 218
Query: 524 LKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
+KA + + TV+ EAK I S L + RI
Sbjct: 219 IKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 117/220 (53%), Gaps = 24/220 (10%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKV--HQLNKDWKEDKKANYIKHALREYNIHKAL 348
LL ++G+G +++V K R A KV +L D D+ ++++ ++ +A
Sbjct: 13 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND---DEDIDWVQ--TEKHVFEQAS 67
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYL 408
+HP +V L+ F+ ++ F V+EY +G DL F++++ + + E AR ++ AL YL
Sbjct: 68 NHPFLVGLHSCFQTESRLFF-VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 126
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+E +I+ DLK N+LL G IK+TD+G+ K E P D TS GT
Sbjct: 127 HERG--IIYRDLKLDNVLLDSE---GHIKLTDYGMCK----EGLRPG---DTTSXFCGTP 174
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
Y+ PE + G++ VD W++GV+ ++ + G+ PF
Sbjct: 175 NYIAPEI-LRGED---YGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 123/293 (41%), Gaps = 33/293 (11%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
SDRY L+ +G G F D + VA K + + E+ K RE H
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK--------REIINH 68
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++L HP +V+ +V + V+EY G +L + +E EAR Q++S +
Sbjct: 69 RSLRHPNIVRFKEVI-LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 127
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ-- 463
Y + ++ V H DLK N LL +G+ +KI DFG SK L SQ
Sbjct: 128 SYCHAMQ--VCHRDLKLENTLL-DGSPAPRLKICDFGYSK-----------SSVLHSQPK 173
Query: 464 -GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENT 522
GT Y+ PE + + K++ DVWS GV Y L G PF + T
Sbjct: 174 STVGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYPFEDPEEPKNF--RKT 228
Query: 523 ILKATEVQFA--NKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVP 573
I + VQ+A + +S E + I RI + + H++ +P
Sbjct: 229 IHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLP 281
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 128/276 (46%), Gaps = 28/276 (10%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
SD Y + LGKG FS V + A K+ K A + RE I
Sbjct: 3 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-----LSARDFQKLEREARI 57
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSA 404
+ L HP +V+L+D + ++ + V + G +L + + +E +A + Q++ +
Sbjct: 58 CRKLQHPNIVRLHDSIQEESFHY-LVFDLVTGGELFEDIVAREFYSEADASHCIQQILES 116
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLS-KVMDEENYNPDHGMDLTSQ 463
+ Y + ++H +LKP N+LL +K+ DFGL+ +V D E + HG
Sbjct: 117 IAYCH--SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGF----- 166
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
AGT YL PE V+ K+P S VD+W+ GVI Y L G PF ++ Q + +
Sbjct: 167 -AGTPGYLSPE--VLKKDP--YSKPVDIWACGVILYILLVGYPPFW-DEDQHRLYAQ--- 217
Query: 524 LKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
+KA + + TV+ EAK I S L + RI
Sbjct: 218 IKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI 253
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 132/287 (45%), Gaps = 27/287 (9%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
++ Y L LGKG FS V + L Q Y A ++ ++ +K RE
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE------REAR 62
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
I + L HP +V+L+D + + + + + G +L + + +E +A + Q++
Sbjct: 63 ICRLLKHPNIVRLHDSISEEGHHY-LIFDLVTGGELFEDIVAREYYSEADASHCIQQILE 121
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
A+ + +++ V+H +LKP N+LL +K+ DFGL+ ++ E G
Sbjct: 122 AVLHCHQMG--VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGF----- 173
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
AGT YL PE V+ K+P VD+W+ GVI Y L G PF ++ Q + ++
Sbjct: 174 -AGTPGYLSPE--VLRKDP--YGKPVDLWACGVILYILLVGYPPFW-DEDQHRLYQQ--- 224
Query: 524 LKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
+KA F + TV+ EAK I L RI +H ++
Sbjct: 225 IKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 91
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 150
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 151 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 199
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 200 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 248
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+ +V F + VS+E + IR CLA R DR + H ++Q
Sbjct: 249 ----IIGGQVFFRQR--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 91
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 150
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 151 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 199
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 200 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 248
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+ +V F + VS+E + IR CLA R DR + H ++Q
Sbjct: 249 ----IIGGQVFFRQR--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 338 ALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARS 396
L+E +I K HP +++L D +E + F V + +L YL + T++E+E R
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETN-TFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 397 I---VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
I +++V+ AL LN ++H DLKP NILL + IK+TDFG S +D
Sbjct: 129 IMRALLEVICALHKLN-----IVHRDLKPENILLDDDM---NIKLTDFGFSCQLDP---- 176
Query: 454 PDHGMDLTSQGAGTYWYLPPECF--VVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHN 511
G L S GT YL PE + N P +VD+WS GVI Y L G PF H
Sbjct: 177 ---GEKLRSV-CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 232
Query: 512 QSQATI 517
+ +
Sbjct: 233 KQMLML 238
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 90
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 149
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 150 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 198
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 199 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 247
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+ +V F + VS+E + IR CLA R DR + H ++Q
Sbjct: 248 ----IIGGQVFFRQR--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 128/276 (46%), Gaps = 28/276 (10%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
SD Y + LGKG FS V + A K+ K A + RE I
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-----LSARDFQKLEREARI 58
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSA 404
+ L HP +V+L+D + ++ + V + G +L + + +E +A + Q++ +
Sbjct: 59 CRKLQHPNIVRLHDSIQEESFHY-LVFDLVTGGELFEDIVAREFYSEADASHCIQQILES 117
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLS-KVMDEENYNPDHGMDLTSQ 463
+ Y + ++H +LKP N+LL +K+ DFGL+ +V D E + HG
Sbjct: 118 IAYCH--SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGF----- 167
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
AGT YL PE V+ K+P S VD+W+ GVI Y L G PF ++ Q + +
Sbjct: 168 -AGTPGYLSPE--VLKKDP--YSKPVDIWACGVILYILLVGYPPFW-DEDQHRLYAQ--- 218
Query: 524 LKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
+KA + + TV+ EAK I S L + RI
Sbjct: 219 IKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 90
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 149
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 150 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 198
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 199 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 247
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+ +V F + VS+E + IR CLA R DR + H ++Q
Sbjct: 248 ----IIGGQVFFRQR--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 97
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 98 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 156
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 157 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 205
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 206 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 254
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS+E + IR CLA R DR + H ++Q
Sbjct: 255 ---IIRG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 47/264 (17%)
Query: 259 GYKNLHIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVAC- 317
G +NL+ + +K +H + D Y++ L+G+G + V+ A+D ++ VA
Sbjct: 10 GRENLYFQGIKNVH------------VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIK 57
Query: 318 KVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEID----ANSFCTVLEY 373
KV+++ +D + K+ LRE I L +++LYD+ D + VLE
Sbjct: 58 KVNRMFEDLIDCKR------ILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEI 111
Query: 374 CDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVC 433
D DL K + E ++I+ ++ +++E +IH DLKP N LL + C
Sbjct: 112 ADS-DLKKLFKTPIFLTEEHIKTILYNLLLGENFIHE--SGIIHRDLKPANCLLNQD--C 166
Query: 434 GEIKITDFGLSKVMD-----------EENYNPD-HGMDLTSQGAG---TYWYLPPECFVV 478
+K+ DFGL++ ++ EEN P H +L Q T WY PE ++
Sbjct: 167 S-VKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL 225
Query: 479 GKNPPKISSKVDVWSVGVIFYQCL 502
+N K +D+WS G IF + L
Sbjct: 226 QENYTK---SIDIWSTGCIFAELL 246
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 78
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 79 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 137
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 138 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 186
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 187 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 235
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS+E + IR CLA R DR + H ++Q
Sbjct: 236 ---IIRG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 107/230 (46%), Gaps = 26/230 (11%)
Query: 280 NNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHAL 339
+N LSD + + LG+G S V++ Q+ A KV + D K +
Sbjct: 46 SNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD----------KKIV 95
Query: 340 R-EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
R E + L HP ++KL ++FE VLE G +L + + +ER+A V
Sbjct: 96 RTEIGVLLRLSHPNIIKLKEIFE-TPTEISLVLELVTGGELFDRIVEKGYYSERDAADAV 154
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGM 458
Q++ A+ YL+E ++H DLKP N+L +KI DFGLSK+++ +
Sbjct: 155 KQILEAVAYLHE--NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV------- 205
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
L GT Y PE P +VD+WSVG+I Y L G +PF
Sbjct: 206 -LMKTVCGTPGYCAPEILRGCAYGP----EVDMWSVGIITYILLCGFEPF 250
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 77
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 78 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 136
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 137 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 185
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 186 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 234
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS+E + IR CLA R DR + H ++Q
Sbjct: 235 ---IIRG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 338 ALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARS 396
L+E +I K HP +++L D +E + F V + +L YL + T++E+E R
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETN-TFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 397 I---VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
I +++V+ AL LN ++H DLKP NILL + IK+TDFG S +D
Sbjct: 129 IMRALLEVICALHKLN-----IVHRDLKPENILLDDDM---NIKLTDFGFSCQLD----- 175
Query: 454 PDHGMDLTSQGAGTYWYLPPECF--VVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHN 511
P + + GT YL PE + N P +VD+WS GVI Y L G PF H
Sbjct: 176 PGEKL---REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 232
Query: 512 QSQATI 517
+ +
Sbjct: 233 KQMLML 238
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 90
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 149
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 150 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 198
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 199 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 247
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS+E + IR CLA R DR + H ++Q
Sbjct: 248 ---IIRG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 105
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 106 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 164
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 165 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 213
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 214 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 262
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS+E + IR CLA R DR + H ++Q
Sbjct: 263 ---IIRG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 105/221 (47%), Gaps = 21/221 (9%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G GGF++V A + VA K+ N + + AL K L H +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL------KNLRHQHIC 71
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
+LY V E AN VLEYC G +L Y+ ++E E R + Q+VSA+ Y++
Sbjct: 72 QLYHVLET-ANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHS--QG 128
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPE 474
H DLKP N+L E + ++K+ DFGL + N D+ + G+ Y PE
Sbjct: 129 YAHRDLKPENLLFDEYH---KLKLIDFGLCA---KPKGNKDYHLQTC---CGSLAYAAPE 179
Query: 475 CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
+ GK+ + S+ DVWS+G++ Y + G PF + A
Sbjct: 180 -LIQGKS--YLGSEADVWSMGILLYVLMCGFLPFDDDNVMA 217
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 130/288 (45%), Gaps = 29/288 (10%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
++D Y L LGKG FS V + + + A K+ K D + RE I
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-----KLEREARI 56
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSA 404
+ L HP +V+L+D + + V + G +L + + +E +A + Q++ +
Sbjct: 57 CRLLKHPNIVRLHDSISEEGFHY-LVFDLVTGGELFEDIVAREYYSEADASHCIQQILES 115
Query: 405 LKY--LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
+ + LN I +H DLKP N+LL + +K+ DFGL+ + + + G
Sbjct: 116 VNHCHLNGI----VHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGF---- 166
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENT 522
AGT YL PE V+ K+P VD+W+ GVI Y L G PF ++ Q + ++
Sbjct: 167 --AGTPGYLSPE--VLRKDP--YGKPVDMWACGVILYILLVGYPPFW-DEDQHRLYQQ-- 217
Query: 523 ILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
+KA F + TV+ EAK I L RI +H ++
Sbjct: 218 -IKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 54 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 110
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 111 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 169
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 170 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 218
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 219 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 267
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS E + IR CLA R DR + H ++Q
Sbjct: 268 ---IIRG---QVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 311
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 62
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 63 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERMEPVQDLFDFITERGALQEELARSFFW 121
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 122 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 170
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 171 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 219
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS+E + IR CLA R DR + H ++Q
Sbjct: 220 ---IIRG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 125/293 (42%), Gaps = 33/293 (11%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
SDRY L+ +G G F D + VA K + + +K A +K RE H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-----RGEKIAANVK---REIINH 69
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++L HP +V+ +V + V+EY G +L + +E EAR Q++S +
Sbjct: 70 RSLRHPNIVRFKEVI-LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ-- 463
Y + ++ V H DLK N LL +G+ +KI DFG SK L SQ
Sbjct: 129 SYCHAMQ--VCHRDLKLENTLL-DGSPAPRLKICDFGYSK-----------SSVLHSQPK 174
Query: 464 -GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENT 522
GT Y+ PE + + K++ DVWS GV Y L G PF + T
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYPFEDPEEPKNF--RKT 229
Query: 523 ILKATEVQFA--NKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVP 573
I + VQ+A + +S E + I RI + + H++ +P
Sbjct: 230 IHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLP 282
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 91
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 150
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 151 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 199
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 200 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 248
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+ +V F + VS E + IR CLA R DR + H ++Q
Sbjct: 249 ----IIGGQVFFRQR--VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 338 ALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARS 396
L+E +I K HP +++L D +E + F V + +L YL + T++E+E R
Sbjct: 57 TLKEVDILRKVSGHPNIIQLKDTYETN-TFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 115
Query: 397 I---VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
I +++V+ AL LN ++H DLKP NILL + IK+TDFG S +D
Sbjct: 116 IMRALLEVICALHKLN-----IVHRDLKPENILLDDDM---NIKLTDFGFSCQLD----- 162
Query: 454 PDHGMDLTSQGAGTYWYLPPECF--VVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHN 511
P + + GT YL PE + N P +VD+WS GVI Y L G PF H
Sbjct: 163 PGEKL---REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 219
Query: 512 QSQATI 517
+ +
Sbjct: 220 KQMLML 225
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 63
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 64 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 122
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 123 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 171
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 172 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 220
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS+E + IR CLA R DR + H ++Q
Sbjct: 221 ---IIRG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 28/218 (12%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G G + V A+D + ++ VA K +L++ ++ A + RE + K L H V+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHA---RRTYRELRLLKHLKHENVI 90
Query: 355 KLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNE 410
L DVF I+ S ++ G DL+ +K + +++ + +V Q++ LKY++
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS-QALSDEHVQFLVYQLLRGLKYIH- 148
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
+IH DLKP N+ + E + E++I DFGL++ DEE + T WY
Sbjct: 149 -SAGIIHRDLKPSNVAVNEDS---ELRILDFGLARQADEE----------MTGYVATRWY 194
Query: 471 LPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + N + VD+WSVG I + L GK F
Sbjct: 195 RAPEIML---NWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 91
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 150
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 151 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 199
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 200 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 248
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+ +V F + VS E + IR CLA R DR + H ++Q
Sbjct: 249 ----IIGGQVFFRQR--VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 90
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 149
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 150 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 198
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 199 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 247
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+ +V F + VS E + IR CLA R DR + H ++Q
Sbjct: 248 ----IIGGQVFFRQR--VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 124/288 (43%), Gaps = 35/288 (12%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWK--EDKKANYIKHALREYNI 344
Y L LLGKGGF V L ++ VA KV N+ W D ++ AL + +
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALL-WKV 91
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEY-CDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
HP V++L D FE F VLE DL Y+ + + E +R QVV+
Sbjct: 92 GAGGGHPGVIRLLDWFETQ-EGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVA 150
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
A+++ + V+H D+K NIL+ C K+ DFG ++ +E Y +
Sbjct: 151 AIQHCHSRG--VVHRDIKDENILIDLRRGCA--KLIDFGSGALLHDEPY---------TD 197
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
GT Y PPE + + VWS+G++ Y + G PF +Q ILE
Sbjct: 198 FDGTRVYSPPEWISRHQY---HALPATVWSLGILLYDMVCGDIPFERDQE---ILE---- 247
Query: 524 LKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPP 571
E+ F VS + IR CLA + R + + ++Q P
Sbjct: 248 ---AELHFPAH--VSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTP 290
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 105
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 106 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 164
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 165 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 213
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 214 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 262
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS E + IR CLA R DR + H ++Q
Sbjct: 263 ---IIRG---QVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 63
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 64 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 122
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 123 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 171
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 172 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 220
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS+E + IR CLA R DR + H ++Q
Sbjct: 221 ---IIRG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 63
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 64 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 122
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 123 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 171
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 172 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 220
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS+E + IR CLA R DR + H ++Q
Sbjct: 221 ---IIRG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 40/243 (16%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVAC-KVHQLNKDWKEDKKANYIKHALREYN 343
+ DRY + L+G G + V +A+D E+R VA K+ ++ +D + K+ LRE
Sbjct: 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKR------ILREIA 104
Query: 344 IHKALDHPRVVKLYD-VFEIDANSF---CTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
I L+H VVK+ D V D F VLE D D + + E ++++
Sbjct: 105 ILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADS-DFKKLFRTPVYLTELHIKTLLY 163
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMD-EENYNPD--- 455
++ +KY++ ++H DLKP N L+ + C +K+ DFGL++ +D EN N
Sbjct: 164 NLLVGVKYVHSAG--ILHRDLKPANCLVNQD--CS-VKVCDFGLARTVDYPENGNSQLPI 218
Query: 456 -------------HGMDLTSQGAG---TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFY 499
H +L Q G T WY PE ++ +N + +DVWS+G IF
Sbjct: 219 SPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQEN---YTEAIDVWSIGCIFA 275
Query: 500 QCL 502
+ L
Sbjct: 276 ELL 278
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 62
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 63 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 121
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 122 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 170
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 171 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 219
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS+E + IR CLA R DR + H ++Q
Sbjct: 220 ---IIRG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 130/283 (45%), Gaps = 27/283 (9%)
Query: 289 YLLLMLLGKGGFSEVHKAFD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
Y L LGKG FS V + L Q Y A ++ ++ +K RE I +
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLE------REARICRL 77
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKY 407
L HP +V+L+D + + + + + G +L + + +E +A + Q++ A+ +
Sbjct: 78 LKHPNIVRLHDSISEEGHHY-LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 136
Query: 408 LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGT 467
+++ V+H DLKP N+LL +K+ DFGL+ ++ E G AGT
Sbjct: 137 CHQMG--VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGF------AGT 187
Query: 468 YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKAT 527
YL PE V+ K+P VD+W+ GVI Y L G PF ++ Q + ++ +KA
Sbjct: 188 PGYLSPE--VLRKDP--YGKPVDLWACGVILYILLVGYPPFW-DEDQHRLYQQ---IKAG 239
Query: 528 EVQFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
F + TV+ EAK I L RI +H ++
Sbjct: 240 AYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 127/291 (43%), Gaps = 25/291 (8%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
+ D Y L ++GKG FS V + + + + A K+ + K + + RE +
Sbjct: 23 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST--EDLKREAS 80
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK----TIAEREARSIVM 399
I L HP +V+L + + D + V E+ DG DL F + + +E A +
Sbjct: 81 ICHMLKHPHIVELLETYSSDGMLY-MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 139
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q++ AL+Y ++ +IH D+KP +LL +K+ FG++ + E
Sbjct: 140 QILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG-------- 189
Query: 460 LTSQG-AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
L + G GT ++ PE VV + P VDVW GVI + L G PF + + L
Sbjct: 190 LVAGGRVGTPHFMAPE--VVKREP--YGKPVDVWGCGVILFILLSGCLPFYGTKER---L 242
Query: 519 EENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
E I ++ +S AK +R L +RI V H +L+
Sbjct: 243 FEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 77
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 78 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 136
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 137 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 185
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 186 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 234
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS E + IR CLA R DR + H ++Q
Sbjct: 235 ---IIRG---QVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 78
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 79 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 137
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 138 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 186
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 187 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 235
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS E + IR CLA R DR + H ++Q
Sbjct: 236 ---IIRG---QVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
Y+L LG G F +V VA K+ LN+ ++ + + + RE K
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKI--LNR--QKIRSLDVVGKIRREIQNLKLF 73
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYL 408
HP ++KLY V ++ F V+EY G +L Y+ ++ + E+E+R + Q++S + Y
Sbjct: 74 RHPHIIKLYQVISTPSDIF-MVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYC 132
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+ + V+H DLKP N+LL + KI DFGLS +M + + G+
Sbjct: 133 H--RHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEF--------LRXSCGSP 179
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
Y PE V +VD+WS GVI Y L G PF
Sbjct: 180 NYAAPE---VISGRLYAGPEVDIWSSGVILYALLCGTLPF 216
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 78
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 79 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 137
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 138 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 186
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 187 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 235
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS E + IR CLA R DR + H ++Q
Sbjct: 236 ---IIRG---QVFFRQRVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQ 279
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L+K ++ A K RE + K
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSKPFQSIIHA---KRTYRELRLLK 88
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 147
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 148 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 192
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 193 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 28/218 (12%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G G + V A+D + ++ VA K +L++ ++ A + RE + K L H V+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHA---RRTYRELRLLKHLKHENVI 90
Query: 355 KLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNE 410
L DVF I+ S ++ G DL+ +K + +++ + +V Q++ LKY++
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK-CQALSDEHVQFLVYQLLRGLKYIH- 148
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
+IH DLKP N+ + E + E++I DFGL++ DEE + T WY
Sbjct: 149 -SAGIIHRDLKPSNVAVNEDS---ELRILDFGLARQADEE----------MTGYVATRWY 194
Query: 471 LPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + N + VD+WSVG I + L GK F
Sbjct: 195 RAPEIML---NWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GYVATRWYRAPEIML---NAMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 29 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 85
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 86 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 144
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 145 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 193
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 194 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 242
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS E + IR CLA R DR + H ++Q
Sbjct: 243 ---IIRG---QVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 286
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 108/226 (47%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E + E+KI DFGL + D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDS---ELKILDFGLCRHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 127/291 (43%), Gaps = 25/291 (8%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
+ D Y L ++GKG FS V + + + + A K+ + K + + RE +
Sbjct: 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST--EDLKREAS 78
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK----TIAEREARSIVM 399
I L HP +V+L + + D + V E+ DG DL F + + +E A +
Sbjct: 79 ICHMLKHPHIVELLETYSSDGMLY-MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q++ AL+Y ++ +IH D+KP +LL +K+ FG++ + E
Sbjct: 138 QILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG-------- 187
Query: 460 LTSQG-AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
L + G GT ++ PE VV + P VDVW GVI + L G PF + + L
Sbjct: 188 LVAGGRVGTPHFMAPE--VVKREP--YGKPVDVWGCGVILFILLSGCLPFYGTKER---L 240
Query: 519 EENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
E I ++ +S AK +R L +RI V H +L+
Sbjct: 241 FEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 5 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 61
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 62 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 120
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 121 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 169
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 170 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 218
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS+E + IR CLA R DR + H ++Q
Sbjct: 219 ---IIRG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 262
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 82
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 141
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E + E+KI DFGL++ D+E +
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDS---ELKILDFGLARHTDDE----------MT 186
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 187 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 82
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 141
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 186
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 187 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 108/226 (47%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E E+KI DFGL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDX---ELKILDFGLARHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 130/288 (45%), Gaps = 29/288 (10%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
++D Y L LGKG FS V + + + A K+ K D + RE I
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-----KLEREARI 56
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSA 404
+ L HP +V+L+D + + V + G +L + + +E +A + Q++ +
Sbjct: 57 CRLLKHPNIVRLHDSISEEGFHY-LVFDLVTGGELFEDIVAREYYSEADASHCIQQILES 115
Query: 405 LKY--LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
+ + LN I +H DLKP N+LL + +K+ DFGL+ + + + G
Sbjct: 116 VNHCHLNGI----VHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGF---- 166
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENT 522
AGT YL PE V+ K+P VD+W+ GVI Y L G PF ++ Q + ++
Sbjct: 167 --AGTPGYLSPE--VLRKDP--YGKPVDMWACGVILYILLVGYPPFW-DEDQHRLYQQ-- 217
Query: 523 ILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
+KA F + TV+ EAK I L RI +H ++
Sbjct: 218 -IKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 96
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 97 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 155
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 200
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 201 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 58
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 59 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 117
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 118 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 166
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 167 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 215
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+ +V F + VS+E + IR CLA R DR + H ++Q
Sbjct: 216 ----IIGGQVFFRQR--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 78
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 137
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E + E+KI DFGL++ D+E +
Sbjct: 138 RGLKYIHSAD--IIHRDLKPSNLAVNEDS---ELKILDFGLARHTDDE----------MT 182
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 183 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 95
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 96 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 154
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 155 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 199
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 200 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 58
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 59 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 117
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 118 QVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 166
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 167 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 215
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS+E + IR CLA R DR + H ++Q
Sbjct: 216 ---IIRG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 86
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 87 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 145
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 146 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 190
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 191 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G GGF +V++AF + ++ V H ++D + I++ +E + L HP +
Sbjct: 14 IIGIGGFGKVYRAFWIGDEVAVKAARHDPDED-----ISQTIENVRQEAKLFAMLKHPNI 68
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYL-NEIK 412
+ L V + N C V+E+ G L+ L K I + +Q+ + YL +E
Sbjct: 69 IALRGVCLKEPN-LCLVMEFARGGPLNRVL-SGKRIPPDILVNWAVQIARGMNYLHDEAI 126
Query: 413 PPVIHYDLKPGNILLTE----GNVCGEI-KITDFGLSKVMDEENYNPDHGMDLTSQGAGT 467
P+IH DLK NIL+ + G++ +I KITDFGL++ AG
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT---------KMSAAGA 177
Query: 468 YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
Y ++ PE S DVWS GV+ ++ L G+ PF
Sbjct: 178 YAWMAPEVI----RASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 88
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 147
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 148 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 192
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 193 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 88
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 147
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 148 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 192
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 193 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 96
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 97 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 155
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MX 200
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 201 GXVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 95
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 96 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 154
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 155 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 199
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 200 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 82
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 141
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 186
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 187 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 96
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 97 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 155
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 200
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 201 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MA 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GFVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 131/280 (46%), Gaps = 39/280 (13%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR-EYNIHKALDHPRV 353
LGKG F V+ A + K VA KV +K + ++H LR E I L HP +
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVL-----FKSQIEKEGVEHQLRREIEIQAHLHHPNI 85
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
++LY+ F D +LEY +L L++ T E+ +I+ ++ AL Y + K
Sbjct: 86 LRLYNYF-YDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKK- 143
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG-AGTYWYLP 472
VIH D+KP N+LL E+KI DFG S H L + GT YLP
Sbjct: 144 -VIHRDIKPENLLLGLKG---ELKIADFGWSV----------HAPSLRRKTMCGTLDYLP 189
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF---GHNQSQATILEENTILKATEV 529
PE + G+ + KVD+W +GV+ Y+ L G PF HN++ I++ + A
Sbjct: 190 PE-MIEGRMH---NEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPA--- 242
Query: 530 QFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+V A+ I L + +R+ + ++ H +++
Sbjct: 243 ------SVPTGAQDLISKLLRHNPSERLPLAQVSAHPWVR 276
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 99
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 100 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 158
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 159 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 203
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 204 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 136/305 (44%), Gaps = 49/305 (16%)
Query: 276 QSRFNNHPVLSDRYLLL---------MLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDW 326
+S F++ L D+ L L + LG G F V + ++ + + L +
Sbjct: 316 ESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG- 374
Query: 327 KEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQ 385
+KA+ + +RE I LD+P +V+L V + A + V+E G L F + +
Sbjct: 375 --TEKAD-TEEMMREAQIMHQLDNPYIVRLIGVCQ--AEALMLVMEMAGGGPLHKFLVGK 429
Query: 386 HKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
+ I ++ QV +KYL E +H +L N+LL + KI+DFGLSK
Sbjct: 430 REEIPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARNVLLVNRHYA---KISDFGLSK 484
Query: 446 VM--DEENYNPDHGMDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQ 500
+ D+ Y T++ AG + WY PEC N K SS+ DVWS GV ++
Sbjct: 485 ALGADDSYY--------TARSAGKWPLKWY-APECI----NFRKFSSRSDVWSYGVTMWE 531
Query: 501 CL-YGKKPFGHNQSQATI--LEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRI 557
L YG+KP+ + + +E+ ++ P E + C Y+ EDR
Sbjct: 532 ALSYGQKPYKKMKGPEVMAFIEQGKRMECP-------PECPPELYALMSDCWIYKWEDRP 584
Query: 558 DVISL 562
D +++
Sbjct: 585 DFLTV 589
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 108/226 (47%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 81
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 140
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E E+KI DFGL++ D+E +
Sbjct: 141 RGLKYIHSAD--IIHRDLKPSNLAVNEDX---ELKILDFGLARHTDDE----------MT 185
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 186 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MA 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GFVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 112/229 (48%), Gaps = 34/229 (14%)
Query: 295 LGKGGFSEVHKAFDLKEQ-RYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD---H 350
+G+G + +V KA DLK R+VA K ++ + + +RE + + L+ H
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRV-----QTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 351 PRVVKLYDVFEID----ANSFCTVLEYCDGHDLDFYLKQ--HKTIAEREARSIVMQVVSA 404
P VV+L+DV + V E+ D DL YL + + + ++ Q++
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
L +L+ + V+H DLKP NIL+T G+IK+ DFGL+++ + M LTS
Sbjct: 133 LDFLHSHR--VVHRDLKPQNILVTSS---GQIKLADFGLARIYSFQ-------MALTSV- 179
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQS 513
T WY PE + ++ VD+WSVG IF + ++ +KP S
Sbjct: 180 VVTLWYRAPEVLLQS----SYATPVDLWSVGCIFAE-MFRRKPLFRGSS 223
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 40/277 (14%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G F V + ++ + + L + +KA+ + +RE I LD+P +V
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG---TEKAD-TEEMMREAQIMHQLDNPYIV 73
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
+L V + A + V+E G L F + + + I ++ QV +KYL E
Sbjct: 74 RLIGVCQ--AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE--K 129
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTY--- 468
+H DL N+LL + KI+DFGLSK + D+ Y T++ AG +
Sbjct: 130 NFVHRDLAARNVLLVNRHYA---KISDFGLSKALGADDSYY--------TARSAGKWPLK 178
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI--LEENTILK 525
WY PEC N K SS+ DVWS GV ++ L YG+KP+ + + +E+ ++
Sbjct: 179 WY-APECI----NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME 233
Query: 526 ATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISL 562
P E + C Y+ EDR D +++
Sbjct: 234 CP-------PECPPELYALMSDCWIYKWEDRPDFLTV 263
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 83
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 142
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ H D +
Sbjct: 143 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLAR----------HTADEMT 187
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 188 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 83
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 142
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ H D +
Sbjct: 143 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLAR----------HTADEMT 187
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 188 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 37/290 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALREY 342
L +Y + LLG GGF V+ + + VA K + ++ DW E + E
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP---MEV 58
Query: 343 NIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVM 399
+ K + V++L D FE +SF +LE + DL ++ + + E ARS
Sbjct: 59 VLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 117
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
QV+ A+++ + V+H D+K NIL+ GE+K+ DFG ++ + Y
Sbjct: 118 QVLEAVRHCHNXG--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY------- 166
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT Y PPE + + ++ VWS+G++ Y + G PF H++
Sbjct: 167 --TDFDGTRVYSPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE------ 215
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I++ Q + VS E + IR CLA R DR + H ++Q
Sbjct: 216 ---IIRG---QVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 82
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 141
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 186
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 187 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 122/293 (41%), Gaps = 33/293 (11%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
SDRY L+ +G G F D + VA K + + E+ K RE H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK--------REIINH 69
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++L HP +V+ +V + V+EY G +L + +E EAR Q++S +
Sbjct: 70 RSLRHPNIVRFKEVI-LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ-- 463
Y + ++ V H DLK N LL +G+ +KI FG SK L SQ
Sbjct: 129 SYCHAMQ--VCHRDLKLENTLL-DGSPAPRLKICAFGYSK-----------SSVLHSQPK 174
Query: 464 -GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENT 522
GT Y+ PE + + K++ DVWS GV Y L G PF + T
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYPFEDPEEPKNF--RKT 229
Query: 523 ILKATEVQFA--NKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVP 573
I + VQ+A + +S E + I RI + + H++ +P
Sbjct: 230 IHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLP 282
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 108/226 (47%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 87
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 88 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 146
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E E+KI DFGL++ D+E +
Sbjct: 147 RGLKYIHSAD--IIHRDLKPSNLAVNEDX---ELKILDFGLARHTDDE----------MT 191
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 192 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 83
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 142
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ H D +
Sbjct: 143 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLAR----------HTADEMT 187
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 188 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GXVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 78
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 137
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 138 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 182
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 183 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 81
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 140
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 141 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 185
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 186 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 122/293 (41%), Gaps = 33/293 (11%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
SDRY L+ +G G F D + VA K + + E+ K RE H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK--------REIINH 69
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++L HP +V+ +V + V+EY G +L + +E EAR Q++S +
Sbjct: 70 RSLRHPNIVRFKEVI-LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ-- 463
Y + ++ V H DLK N LL +G+ +KI FG SK L SQ
Sbjct: 129 SYCHAMQ--VCHRDLKLENTLL-DGSPAPRLKICAFGYSK-----------SSVLHSQPK 174
Query: 464 -GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENT 522
GT Y+ PE + + K++ DVWS GV Y L G PF + T
Sbjct: 175 DTVGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYPFEDPEEPKNF--RKT 229
Query: 523 ILKATEVQFA--NKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVP 573
I + VQ+A + +S E + I RI + + H++ +P
Sbjct: 230 IHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLP 282
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 108/226 (47%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 81
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 140
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E E+KI DFGL++ D+E +
Sbjct: 141 RGLKYIHSAD--IIHRDLKPSNLAVNEDX---ELKILDFGLARHTDDE----------MT 185
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 186 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 78
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 137
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 138 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 182
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 183 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 72
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 131
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 176
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 177 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 72
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 131
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MA 176
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 177 GFVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 83
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 142
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 143 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 187
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 188 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 28/218 (12%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G G + V A+D + ++ VA K +L++ ++ A + RE + K L H V+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHA---RRTYRELRLLKHLKHENVI 82
Query: 355 KLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNE 410
L DVF I+ S ++ G DL+ +K + +++ + +V Q++ LKY++
Sbjct: 83 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK-CQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
+IH DLKP N+ + E C E++I DFGL++ DEE + T WY
Sbjct: 142 AG--IIHRDLKPSNVAVNED--C-ELRILDFGLARQADEE----------MTGYVATRWY 186
Query: 471 LPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + N + VD+WSVG I + L GK F
Sbjct: 187 RAPEIML---NWMHYNQTVDIWSVGCIMAELLQGKALF 221
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 81
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 140
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 141 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 185
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 186 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 29/278 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V ++D+K +A K +L++ ++ A K RE + K
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVK--KLSRPFQSIIHA---KRTYRELRLLK 105
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 106 HMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 164
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 165 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 209
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENT 522
T WY PE + N + VD+WSVG I + L G+ F L++
Sbjct: 210 GYVATRWYRAPEIML---NWMHYNMTVDIWSVGCIMAELLTGRTLFP-GTDHINQLQQIM 265
Query: 523 ILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVI 560
L T S+EA+ +I S K + DV
Sbjct: 266 RLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVF 303
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 87
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 88 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 146
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 147 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 191
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 192 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 75
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 76 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 134
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 135 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 179
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 180 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 78
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 137
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 138 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 182
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 183 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 103/239 (43%), Gaps = 34/239 (14%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARSI 397
+RE + + P +V Y F D S C +E+ DG LD LK+ I E+ +
Sbjct: 71 IRELQVLHECNSPYIVGFYGAFYSDGEISIC--MEHMDGGSLDQVLKKAGRIPEQILGKV 128
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ V+ L YL E K ++H D+KP NIL+ N GEIK+ DFG+S + +
Sbjct: 129 SIAVIKGLTYLRE-KHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLID-------- 176
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATI 517
+ + GT Y+ PE S + D+WS+G+ + G+ P G I
Sbjct: 177 -SMANSFVGTRSYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAI 231
Query: 518 LEENTILKATEVQFANKP-------TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
E + N+P S E + F+ CL +R D+ L H +++
Sbjct: 232 FELLDYI-------VNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 283
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 134/324 (41%), Gaps = 53/324 (16%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
L +Y L +G+G + V A + + + A K+ NK + + K ++ E +
Sbjct: 24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKD--VERIKTEVRL 81
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYC-DGHDLDFY--------------------- 382
K L HP + +LY+V+E D C V+E C GH LD
Sbjct: 82 MKKLHHPNIARLYEVYE-DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQIC 140
Query: 383 ----------------LKQHKTIAERE--ARSIVMQVVSALKYLNEIKPPVIHYDLKPGN 424
++ +RE +I+ Q+ SAL YL+ + H D+KP N
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH--NQGICHRDIKPEN 198
Query: 425 ILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPK 484
L + N EIK+ DFGLSK + N +GM + AGT +++ PE V+
Sbjct: 199 FLFST-NKSFEIKLVDFGLSKEFYKLNNGEYYGM---TTKAGTPYFVAPE--VLNTTNES 252
Query: 485 ISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGF 544
K D WS GV+ + L G PF TI + K + N +S A+
Sbjct: 253 YGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTI--SQVLNKKLCFENPNYNVLSPLARDL 310
Query: 545 IRSCLAYRKEDRIDVISLARHDYL 568
+ + L ++R D + +H ++
Sbjct: 311 LSNLLNRNVDERFDAMRALQHPWI 334
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 74
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 75 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 133
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 134 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 178
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 179 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 221
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 73
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 132
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 133 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 177
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 178 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 72
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 131
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 176
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 177 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 112/229 (48%), Gaps = 34/229 (14%)
Query: 295 LGKGGFSEVHKAFDLKEQ-RYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD---H 350
+G+G + +V KA DLK R+VA K ++ + + +RE + + L+ H
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRV-----QTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 351 PRVVKLYDVFEID----ANSFCTVLEYCDGHDLDFYLKQ--HKTIAEREARSIVMQVVSA 404
P VV+L+DV + V E+ D DL YL + + + ++ Q++
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
L +L+ + V+H DLKP NIL+T G+IK+ DFGL+++ + M LTS
Sbjct: 133 LDFLHSHR--VVHRDLKPQNILVTSS---GQIKLADFGLARIYSFQ-------MALTSV- 179
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQS 513
T WY PE + ++ VD+WSVG IF + ++ +KP S
Sbjct: 180 VVTLWYRAPEVLL----QSSYATPVDLWSVGCIFAE-MFRRKPLFRGSS 223
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 112/229 (48%), Gaps = 34/229 (14%)
Query: 295 LGKGGFSEVHKAFDLKEQ-RYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD---H 350
+G+G + +V KA DLK R+VA K ++ + + +RE + + L+ H
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRV-----QTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 351 PRVVKLYDVFEID----ANSFCTVLEYCDGHDLDFYLKQ--HKTIAEREARSIVMQVVSA 404
P VV+L+DV + V E+ D DL YL + + + ++ Q++
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
L +L+ + V+H DLKP NIL+T G+IK+ DFGL+++ + M LTS
Sbjct: 133 LDFLHSHR--VVHRDLKPQNILVTSS---GQIKLADFGLARIYSFQ-------MALTSV- 179
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQS 513
T WY PE + ++ VD+WSVG IF + ++ +KP S
Sbjct: 180 VVTLWYRAPEVLL----QSSYATPVDLWSVGCIFAE-MFRRKPLFRGSS 223
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 99
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 100 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 158
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E
Sbjct: 159 RGLKYIH--SADIIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MX 203
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 204 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 73
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 132
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 133 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 177
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 178 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 25/286 (8%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
+D Y L LGKG FS V + + A K+ K D + RE I
Sbjct: 29 FTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQK-----LEREARI 83
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSA 404
+ L HP +V+L+D + + V + G +L + + +E +A + Q++ +
Sbjct: 84 CRLLKHPNIVRLHDSISEEGFHY-LVFDLVTGGELFEDIVAREYYSEADASHCIHQILES 142
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
+ ++++ ++H DLKP N+LL +K+ DFGL+ + E G
Sbjct: 143 VNHIHQ--HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ-QAWFGF------ 193
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
AGT YL PE V+ K+P VD+W+ GVI Y L G PF ++ Q + ++ +
Sbjct: 194 AGTPGYLSPE--VLRKDP--YGKPVDIWACGVILYILLVGYPPFW-DEDQHKLYQQ---I 245
Query: 525 KATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
KA F + TV+ EAK I L RI +H ++
Sbjct: 246 KAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWV 291
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 72
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK-LTDDHVQFLIYQIL 131
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DFGL++ D+E +
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFGLARHTDDE----------MT 176
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 177 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 24/282 (8%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALRE--YNIHKALDHP 351
++G+G S V + A K+ ++ + ++ ++ A R + + + HP
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 352 RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
++ L D +E + F V + +L YL + ++E+E RSI+ ++ A+ +L+
Sbjct: 161 HIITLIDSYESSSFMFL-VFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN 219
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
++H DLKP NILL + +I+++DFG S ++ P + + GT YL
Sbjct: 220 N--IVHRDLKPENILLDDNM---QIRLSDFGFSCHLE-----PGEKL---RELCGTPGYL 266
Query: 472 PPECF--VVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEV 529
PE + + P +VD+W+ GVI + L G PF H + IL I++ +
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ---ILMLRMIMEG-QY 322
Query: 530 QFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
QF++ S+ K I L E R+ +H + +
Sbjct: 323 QFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 21/224 (9%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
+ RY L LG+G F+ V+KA D + VA K +L + + K + ALRE +
Sbjct: 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGH--RSEAKDGINRTALREIKLL 66
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSA 404
+ L HP ++ L D F +N V ++ + DL+ +K + + ++ ++ +
Sbjct: 67 QELSHPNIIGLLDAFGHKSN-ISLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLMTLQG 124
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
L+YL++ ++H DLKP N+LL E V +K+ DFGL+K N H +
Sbjct: 125 LEYLHQHW--ILHRDLKPNNLLLDENGV---LKLADFGLAKSFGSPNRAYXHQVV----- 174
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + VD+W+VG I + L + PF
Sbjct: 175 --TRWYRAPELLFGAR---MYGVGVDMWAVGCILAELLL-RVPF 212
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 130/302 (43%), Gaps = 35/302 (11%)
Query: 254 DSYLIGYKNL--HIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKE 311
D++L YK+ IR+L R+ ED Y ++ ++G+G F EV
Sbjct: 53 DNFLSRYKDTINKIRDL-RMKAED-------------YEVVKVIGRGAFGEVQLVRHKST 98
Query: 312 QRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVL 371
++ A K+ + K A + + E +I + P VV+L+ F+ D V+
Sbjct: 99 RKVYAMKLLSKFEMIKRSDSAFFWE----ERDIMAFANSPWVVQLFYAFQ-DDRYLYMVM 153
Query: 372 EYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGN 431
EY G DL L + + E+ AR +VV AL ++ + IH D+KP N+LL +
Sbjct: 154 EYMPGGDL-VNLMSNYDVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKS- 209
Query: 432 VCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDV 491
G +K+ DFG M++E GM GT Y+ PE + D
Sbjct: 210 --GHLKLADFGTCMKMNKE------GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 261
Query: 492 WSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAY 551
WSVGV Y+ L G PF + T + + F + +S EAK I + L
Sbjct: 262 WSVGVFLYEMLVGDTPFYADSLVGTY--SKIMNHKNSLTFPDDNDISKEAKNLICAFLTD 319
Query: 552 RK 553
R+
Sbjct: 320 RE 321
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI D+GL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDYGLARHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 24/223 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+ Y+ L LG+G ++ V+K VA K ++ + +E A+RE ++ K
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALK--EIRLEHEEGAPCT----AIREVSLLK 55
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE-REARSIVMQVVSAL 405
L H +V L+D+ + S V EY D DL YL I + + Q++ L
Sbjct: 56 DLKHANIVTLHDIIHTE-KSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGL 113
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y + K V+H DLKP N+L+ E GE+K+ DFGL++ D+ +
Sbjct: 114 AYCHRQK--VLHRDLKPQNLLINER---GELKLADFGLARAKSIPTKTYDNEV------- 161
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PP+ + + S+++D+W VG IFY+ G+ F
Sbjct: 162 VTLWYRPPDILLGSTD---YSTQIDMWGVGCIFYEMATGRPLF 201
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 127/317 (40%), Gaps = 60/317 (18%)
Query: 272 HNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKK 331
H + + + ++ D + +LG G +V + F+ + Q A K+ Q
Sbjct: 3 HVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ---------- 52
Query: 332 ANYIKHALREYNIH-KALDHPRVVKLYDVFE-IDANSFC--TVLEYCDGHDLDFYLKQH- 386
A RE +H +A P +V++ DV+E + A C V+E DG +L ++
Sbjct: 53 --DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRG 110
Query: 387 -KTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
+ EREA I+ + A++YL+ I + H D+KP N+L T +K+TDFG +K
Sbjct: 111 DQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
Query: 446 VMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGK 505
E Y+ D+WS+GVI Y L G
Sbjct: 169 ETTGEKYD---------------------------------KSCDMWSLGVIMYILLCGY 195
Query: 506 KPFGHNQSQATILEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLA 563
PF N A T ++ + +F N VS E K IR+ L R+ +
Sbjct: 196 PPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFM 255
Query: 564 RHDYLQ-----PPVPKH 575
H ++ P P H
Sbjct: 256 NHPWIMQSTKVPQTPLH 272
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 130/302 (43%), Gaps = 35/302 (11%)
Query: 254 DSYLIGYKNL--HIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKE 311
D++L YK+ IR+L R+ ED Y ++ ++G+G F EV
Sbjct: 48 DNFLSRYKDTINKIRDL-RMKAED-------------YEVVKVIGRGAFGEVQLVRHKST 93
Query: 312 QRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVL 371
++ A K+ + K A + + E +I + P VV+L+ F+ D V+
Sbjct: 94 RKVYAMKLLSKFEMIKRSDSAFFWE----ERDIMAFANSPWVVQLFYAFQ-DDRYLYMVM 148
Query: 372 EYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGN 431
EY G DL L + + E+ AR +VV AL ++ + IH D+KP N+LL +
Sbjct: 149 EYMPGGDL-VNLMSNYDVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKS- 204
Query: 432 VCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDV 491
G +K+ DFG M++E GM GT Y+ PE + D
Sbjct: 205 --GHLKLADFGTCMKMNKE------GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 256
Query: 492 WSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAY 551
WSVGV Y+ L G PF + T + + F + +S EAK I + L
Sbjct: 257 WSVGVFLYEMLVGDTPFYADSLVGTY--SKIMNHKNSLTFPDDNDISKEAKNLICAFLTD 314
Query: 552 RK 553
R+
Sbjct: 315 RE 316
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 115/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKEIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+++ + G IK+TDFGL+K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLMIDQQ---GYIKVTDFGLAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 133/306 (43%), Gaps = 28/306 (9%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 4 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 54
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 55 EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 114 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 163
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
++ GT Y+ PE K + VDVWS G++ L G+ P+ +E
Sbjct: 164 LNKMCGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QE 217
Query: 521 NTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKHGRQSA 580
+ K + + + + L RI + + + + P+ K ++
Sbjct: 218 YSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPR 277
Query: 581 SSSAPV 586
+S V
Sbjct: 278 VTSGGV 283
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 24/220 (10%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+GKGGF VHK +K++ VA K L E + + RE I L+HP +V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYL--KQHKTIAEREARSIVMQVVSALKYLNEIK 412
KLY + N V+E+ DL L K H + R +++ + ++Y+
Sbjct: 87 KLYGLMH---NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLR-LMLDIALGIEYMQNQN 142
Query: 413 PPVIHYDLKPGNILLTE----GNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
PP++H DL+ NI L VC K+ DFGLS+ + S G +
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCA--KVADFGLSQ----------QSVHSVSGLLGNF 190
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ PE +G + K D +S +I Y L G+ PF
Sbjct: 191 QWMAPE--TIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 29/220 (13%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G ++ V+K + YVA K + K D + A+RE ++ K L H +V
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALK------EVKLDSEEGTPSTAIREISLMKELKHENIV 66
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH------KTIAEREARSIVMQVVSALKYL 408
+LYDV + N V E+ D +DL Y+ + + + Q++ L +
Sbjct: 67 RLYDVIHTE-NKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+E K ++H DLKP N+L+ N G++K+ DFGL++ ++ S T
Sbjct: 125 HENK--ILHRDLKPQNLLI---NKRGQLKLGDFGLARAFGIP-------VNTFSSEVVTL 172
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
WY P+ + + S+ +D+WS G I + + GK F
Sbjct: 173 WYRAPDVLMGSRT---YSTSIDIWSCGCILAEMITGKPLF 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 25/228 (10%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 3 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 53
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 54 EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 113 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 162
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ GT Y+ PE K + VDVWS G++ L G+ P+
Sbjct: 163 LNKMCGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 116/264 (43%), Gaps = 32/264 (12%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G G F VH + L + + VA K + +ED + E + L HP++V
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEED--------FIEEAEVMMKLSHPKLV 65
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLK-QHKTIAEREARSIVMQVVSALKYLNEIKP 413
+LY V ++ C V E+ + L YL+ Q A + + V + YL E
Sbjct: 66 QLYGVC-LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE--A 122
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH DL N L+ E V IK++DFG+++ + ++ Y G + A P
Sbjct: 123 SVIHRDLAARNCLVGENQV---IKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS------P 173
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLY-GKKPFGHNQSQATILEENTILKATEVQFA 532
E F + + SSK DVWS GV+ ++ GK P+ N+S + ++E+ + T +
Sbjct: 174 EVF----SFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDIS----TGFRLY 224
Query: 533 NKPTVSNEAKGFIRSCLAYRKEDR 556
S + C R EDR
Sbjct: 225 KPRLASTHVYQIMNHCWKERPEDR 248
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 130/302 (43%), Gaps = 35/302 (11%)
Query: 254 DSYLIGYKNL--HIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKE 311
D++L YK+ IR+L R+ ED Y ++ ++G+G F EV
Sbjct: 53 DNFLSRYKDTINKIRDL-RMKAED-------------YEVVKVIGRGAFGEVQLVRHKST 98
Query: 312 QRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVL 371
++ A K+ + K A + + E +I + P VV+L+ F+ D V+
Sbjct: 99 RKVYAMKLLSKFEMIKRSDSAFFWE----ERDIMAFANSPWVVQLFYAFQ-DDRYLYMVM 153
Query: 372 EYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGN 431
EY G DL L + + E+ AR +VV AL ++ + IH D+KP N+LL +
Sbjct: 154 EYMPGGDL-VNLMSNYDVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKS- 209
Query: 432 VCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDV 491
G +K+ DFG M++E GM GT Y+ PE + D
Sbjct: 210 --GHLKLADFGTCMKMNKE------GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 261
Query: 492 WSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAY 551
WSVGV Y+ L G PF + T + + F + +S EAK I + L
Sbjct: 262 WSVGVFLYEMLVGDTPFYADSLVGTY--SKIMNHKNSLTFPDDNDISKEAKNLICAFLTD 319
Query: 552 RK 553
R+
Sbjct: 320 RE 321
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 33/233 (14%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV L ++ ++ + L + E ++ ++ L E +I DHP
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPN 107
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
+++L V + V EY + LD +L++H +A+ V+Q+V S +
Sbjct: 108 IIRLEGVVT-KSKPVMIVTEYMENGSLDSFLRKH------DAQFTVIQLVGMLRGIASGM 160
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KYL+++ +H DL NIL+ VC K++DFGLS+V++++ P+ T G
Sbjct: 161 KYLSDMG--FVHRDLAARNILINSNLVC---KVSDFGLSRVLEDD---PEAAYT-TRGGK 211
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 212 IPIRWTSPEAIAY----RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 133/306 (43%), Gaps = 28/306 (9%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 4 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 54
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 55 EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 114 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 163
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
++ GT Y+ PE K + VDVWS G++ L G+ P+ +E
Sbjct: 164 LNKMCGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QE 217
Query: 521 NTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKHGRQSA 580
+ K + + + + L RI + + + + P+ K ++
Sbjct: 218 YSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPR 277
Query: 581 SSSAPV 586
+S V
Sbjct: 278 VTSGGV 283
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 133/306 (43%), Gaps = 28/306 (9%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 4 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 54
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 55 EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 114 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 163
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
++ GT Y+ PE K + VDVWS G++ L G+ P+ +E
Sbjct: 164 LNKMCGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QE 217
Query: 521 NTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKHGRQSA 580
+ K + + + + L RI + + + + P+ K ++
Sbjct: 218 YSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPR 277
Query: 581 SSSAPV 586
+S V
Sbjct: 278 VTSGGV 283
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 133/306 (43%), Gaps = 28/306 (9%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 4 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 54
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 55 EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 114 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 163
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
++ GT Y+ PE K + VDVWS G++ L G+ P+ +E
Sbjct: 164 LNKMCGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QE 217
Query: 521 NTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKHGRQSA 580
+ K + + + + L RI + + + + P+ K ++
Sbjct: 218 YSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPR 277
Query: 581 SSSAPV 586
+S V
Sbjct: 278 VTSGGV 283
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V KA + + VA K +L +D ALRE + K L H +V
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRL-----DDDDEGVPSSALREICLLKELKHKNIV 64
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE-ARSIVMQVVSALKYLNEIKP 413
+L+DV D V E+CD DL Y + E +S + Q++ L + +
Sbjct: 65 RLHDVLHSD-KKLTLVFEFCD-QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN- 121
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG--TYWYL 471
V+H DLKP N+L+ N GE+K+ DFGL++ G+ + A T WY
Sbjct: 122 -VLHRDLKPQNLLI---NRNGELKLADFGLARAF---------GIPVRCYSAEVVTLWYR 168
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PP+ K S+ +D+WS G IF + +P
Sbjct: 169 PPDVLFGAK---LYSTSIDMWSAGCIFAELANAARPL 202
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 114/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 97
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 157 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWTL----------CG 201
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 202 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 33/233 (14%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV L ++ ++ + L + E ++ ++ L E +I DHP
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPN 107
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
+++L V + V EY + LD +L++H +A+ V+Q+V S +
Sbjct: 108 IIRLEGVVT-KSKPVMIVTEYMENGSLDSFLRKH------DAQFTVIQLVGMLRGIASGM 160
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KYL+++ +H DL NIL+ VC K++DFGLS+V++++ P+ T G
Sbjct: 161 KYLSDMG--YVHRDLAARNILINSNLVC---KVSDFGLSRVLEDD---PEAAYT-TRGGK 211
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 212 IPIRWTSPEAIAY----RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 25/228 (10%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 3 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 53
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 54 EIXINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 113 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 162
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ GT Y+ PE K + VDVWS G++ L G+ P+
Sbjct: 163 LNKMCGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 108/226 (47%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI FGL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILGFGLARHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 33/233 (14%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV L ++ ++ + L + E ++ ++ L E +I DHP
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPN 78
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
+++L V + V EY + LD +L++H +A+ V+Q+V S +
Sbjct: 79 IIRLEGVVT-KSKPVMIVTEYMENGSLDSFLRKH------DAQFTVIQLVGMLRGIASGM 131
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KYL+++ +H DL NIL+ VC K++DFGLS+V++++ P+ T G
Sbjct: 132 KYLSDMG--YVHRDLAARNILINSNLVC---KVSDFGLSRVLEDD---PEAAYT-TRGGK 182
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 183 IPIRWTSPEAIAY----RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 231
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 114/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+++ + G IK+TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLMIDQQ---GYIKVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 25/228 (10%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 3 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 53
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 54 EIXINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 113 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 162
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ GT Y+ PE K + VDVWS G++ L G+ P+
Sbjct: 163 LNKMXGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 21/218 (9%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
DRY + LG+G + EV+KA D VA K +L E ++ A+RE ++ K
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRL-----EHEEEGVPGTAIREVSLLK 88
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
L H +++L V + + + EY + +DL Y+ ++ ++ R +S + Q+++ +
Sbjct: 89 ELQHRNIIELKSVIHHN-HRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVN 146
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGE--IKITDFGLSKVMDEENYNPDHGMDLTSQG 464
+ + + +H DLKP N+LL+ + +KI DFGL++ H +
Sbjct: 147 FCHSRR--CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII----- 199
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
T WY PPE + ++ S+ VD+WS+ I+ + L
Sbjct: 200 --TLWYRPPEILLGSRH---YSTSVDIWSIACIWAEML 232
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 33/233 (14%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV L ++ ++ + L + E ++ ++ L E +I DHP
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPN 107
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
+++L V + V EY + LD +L++H +A+ V+Q+V S +
Sbjct: 108 IIRLEGVVT-KSKPVMIVTEYMENGSLDSFLRKH------DAQFTVIQLVGMLRGIASGM 160
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KYL+++ +H DL NIL+ VC K++DFGLS+V++++ P+ T G
Sbjct: 161 KYLSDMG--YVHRDLAARNILINSNLVC---KVSDFGLSRVLEDD---PEAAYT-TRGGK 211
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 212 IPIRWTSPEAIAY----RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 33/233 (14%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV L ++ ++ + L + E ++ ++ L E +I DHP
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPN 107
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
+++L V + V EY + LD +L++H +A+ V+Q+V S +
Sbjct: 108 IIRLEGVVT-KSKPVMIVTEYMENGSLDSFLRKH------DAQFTVIQLVGMLRGIASGM 160
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KYL+++ +H DL NIL+ VC K++DFGLS+V++++ P+ T G
Sbjct: 161 KYLSDMG--YVHRDLAARNILINSNLVC---KVSDFGLSRVLEDD---PEAAYT-TRGGK 211
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 212 IPIRWTSPEAIAY----RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 33/233 (14%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV L ++ ++ + L + E ++ ++ L E +I DHP
Sbjct: 40 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPN 95
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
+++L V + V EY + LD +L++H +A+ V+Q+V S +
Sbjct: 96 IIRLEGVVT-KSKPVMIVTEYMENGSLDSFLRKH------DAQFTVIQLVGMLRGIASGM 148
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KYL+++ +H DL NIL+ VC K++DFGLS+V++++ P+ T G
Sbjct: 149 KYLSDMG--YVHRDLAARNILINSNLVC---KVSDFGLSRVLEDD---PEAAYT-TRGGK 199
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 200 IPIRWTSPEAIAY----RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 248
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 116/264 (43%), Gaps = 32/264 (12%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G G F VH + L + + VA K + +ED + E + L HP++V
Sbjct: 13 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEED--------FIEEAEVMMKLSHPKLV 63
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLK-QHKTIAEREARSIVMQVVSALKYLNEIKP 413
+LY V ++ C V E+ + L YL+ Q A + + V + YL E
Sbjct: 64 QLYGVC-LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE--A 120
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH DL N L+ E V IK++DFG+++ + ++ Y G + A P
Sbjct: 121 CVIHRDLAARNCLVGENQV---IKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS------P 171
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLY-GKKPFGHNQSQATILEENTILKATEVQFA 532
E F + + SSK DVWS GV+ ++ GK P+ N+S + ++E+ + T +
Sbjct: 172 EVF----SFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDIS----TGFRLY 222
Query: 533 NKPTVSNEAKGFIRSCLAYRKEDR 556
S + C R EDR
Sbjct: 223 KPRLASTHVYQIMNHCWKERPEDR 246
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 116/264 (43%), Gaps = 32/264 (12%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G G F VH + L + + VA K + +ED + E + L HP++V
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEED--------FIEEAEVMMKLSHPKLV 65
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLK-QHKTIAEREARSIVMQVVSALKYLNEIKP 413
+LY V ++ C V E+ + L YL+ Q A + + V + YL E
Sbjct: 66 QLYGVC-LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE--A 122
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH DL N L+ E V IK++DFG+++ + ++ Y G + A P
Sbjct: 123 CVIHRDLAARNCLVGENQV---IKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS------P 173
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLY-GKKPFGHNQSQATILEENTILKATEVQFA 532
E F + + SSK DVWS GV+ ++ GK P+ N+S + ++E+ + T +
Sbjct: 174 EVF----SFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDIS----TGFRLY 224
Query: 533 NKPTVSNEAKGFIRSCLAYRKEDR 556
S + C R EDR
Sbjct: 225 KPRLASTHVYQIMNHCWKERPEDR 248
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKEIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+++ + G I++TDFGL+K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLMIDQQ---GYIQVTDFGLAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 33/233 (14%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV L ++ ++ + L + E ++ ++ L E +I DHP
Sbjct: 50 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPN 105
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
+++L V + V EY + LD +L++H +A+ V+Q+V S +
Sbjct: 106 IIRLEGVVT-KSKPVMIVTEYMENGSLDSFLRKH------DAQFTVIQLVGMLRGIASGM 158
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KYL+++ +H DL NIL+ VC K++DFGLS+V++++ P+ T G
Sbjct: 159 KYLSDMG--YVHRDLAARNILINSNLVC---KVSDFGLSRVLEDD---PEAAYT-TRGGK 209
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 210 IPIRWTSPEAIAY----RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 258
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 116/264 (43%), Gaps = 32/264 (12%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G G F VH + L + + VA K + +ED + E + L HP++V
Sbjct: 18 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEED--------FIEEAEVMMKLSHPKLV 68
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLK-QHKTIAEREARSIVMQVVSALKYLNEIKP 413
+LY V ++ C V E+ + L YL+ Q A + + V + YL E
Sbjct: 69 QLYGVC-LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE--A 125
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH DL N L+ E V IK++DFG+++ + ++ Y G + A P
Sbjct: 126 CVIHRDLAARNCLVGENQV---IKVSDFGMTRFVLDDQYTSSTGTKFPVKWA------SP 176
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLY-GKKPFGHNQSQATILEENTILKATEVQFA 532
E F + + SSK DVWS GV+ ++ GK P+ N+S + ++E+ + T +
Sbjct: 177 EVF----SFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDIS----TGFRLY 227
Query: 533 NKPTVSNEAKGFIRSCLAYRKEDR 556
S + C R EDR
Sbjct: 228 KPRLASTHVYQIMNHCWRERPEDR 251
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 33/233 (14%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV L ++ ++ + L + E ++ ++ L E +I DHP
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPN 107
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
+++L V + V EY + LD +L++H +A+ V+Q+V S +
Sbjct: 108 IIRLEGVVT-KSKPVMIVTEYMENGSLDSFLRKH------DAQFTVIQLVGMLRGIASGM 160
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KYL+++ +H DL NIL+ VC K++DFGLS+V++++ P+ T G
Sbjct: 161 KYLSDMG--YVHRDLAARNILINSNLVC---KVSDFGLSRVLEDD---PEAAYT-TRGGK 211
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 212 IPIRWTSPEAIAY----RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 113/244 (46%), Gaps = 35/244 (14%)
Query: 294 LLGKGGFSEV-HKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G EV + + QR V + L + E ++ ++ L E +I DHP
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDF----LSEASIMGQFDHPN 111
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
+++L V V EY + LD +L+ H + + +MQ+V + +
Sbjct: 112 IIRLEGVV-TRGRLAMIVTEYMENGSLDTFLRTH------DGQFTIMQLVGMLRGVGAGM 164
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
+YL+++ +H DL N+L+ VC K++DFGLS+V+++ +PD T
Sbjct: 165 RYLSDLG--YVHRDLAARNVLVDSNLVC---KVSDFGLSRVLED---DPDAAXTTTGGKI 216
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGH--NQSQATILEENT 522
W PE SS DVWS GV+ ++ L YG++P+ + N+ + +EE
Sbjct: 217 PIRW-TAPEAIAF----RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY 271
Query: 523 ILKA 526
L A
Sbjct: 272 RLPA 275
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 25/228 (10%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 4 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 54
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 55 EIXINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 114 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 163
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ GT Y+ PE K + VDVWS G++ L G+ P+
Sbjct: 164 LNKMXGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 25/228 (10%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 2 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 52
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 53 EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 111
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 112 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 161
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ GT Y+ PE K + VDVWS G++ L G+ P+
Sbjct: 162 LNKMCGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 25/228 (10%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 3 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 53
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 54 EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 113 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 162
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ GT Y+ PE K + VDVWS G++ L G+ P+
Sbjct: 163 LNKMXGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 25/228 (10%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 3 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 53
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 54 EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 113 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 162
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ GT Y+ PE K + VDVWS G++ L G+ P+
Sbjct: 163 LNKMCGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 108/226 (47%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI DF L++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDFYLARHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 113/244 (46%), Gaps = 35/244 (14%)
Query: 294 LLGKGGFSEV-HKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G EV + + QR V + L + E ++ ++ L E +I DHP
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDF----LSEASIMGQFDHPN 111
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
+++L V V EY + LD +L+ H + + +MQ+V + +
Sbjct: 112 IIRLEGVV-TRGRLAMIVTEYMENGSLDTFLRTH------DGQFTIMQLVGMLRGVGAGM 164
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
+YL+++ +H DL N+L+ VC K++DFGLS+V+++ +PD T
Sbjct: 165 RYLSDLG--YVHRDLAARNVLVDSNLVC---KVSDFGLSRVLED---DPDAAYTTTGGKI 216
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGH--NQSQATILEENT 522
W PE SS DVWS GV+ ++ L YG++P+ + N+ + +EE
Sbjct: 217 PIRW-TAPEAIAF----RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY 271
Query: 523 ILKA 526
L A
Sbjct: 272 RLPA 275
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 131/290 (45%), Gaps = 38/290 (13%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANY-IKHALR---EYN 343
++ LL +LG+G F +V ++ QL K KKA ++ +R E +
Sbjct: 25 QFELLKVLGQGSFGKVFLV-----KKISGSDARQLYA-MKVLKKATLKVRDRVRTKMERD 78
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
I ++HP +VKL+ F+ + + +L++ G DL L + E + + + ++
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGKLYL-ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL 137
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
AL +L+ + +I+ DLKP NILL E G IK+TDFGLSK + DH S
Sbjct: 138 ALDHLHSLG--IIYRDLKPENILLDEE---GHIKLTDFGLSK------ESIDHEKKAYS- 185
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
GT Y+ PE N + D WS GV+ ++ L G PF + T+ I
Sbjct: 186 FCGTVEYMAPEVV----NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETM---TMI 238
Query: 524 LKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRI-----DVISLARHDYL 568
LKA + +S EA+ +R +R+ V + RH +
Sbjct: 239 LKA---KLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 114/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + AG
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQ---QGYIQVTDFGFAKRVKGRTWXL----------AG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 114/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 114/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 27/233 (11%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKD---WKEDKKANYIKHALREYNIH 345
++L +LGKG F +V A K ++ A K L KD +D + ++ + +
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRV----LS 72
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
A +HP + ++ F+ N F V+EY +G DL ++++ A +++ L
Sbjct: 73 LAWEHPFLTHMFCTFQTKENLF-FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGL 131
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
++L+ +++ DLK NILL + G IKI DFG+ K EN D T+
Sbjct: 132 QFLH--SKGIVYRDLKLDNILLDKD---GHIKIADFGMCK----ENMLGDAK---TNXFC 179
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
GT Y+ PE ++G+ K + VD WS GV+ Y+ L G+ PF H Q + +
Sbjct: 180 GTPDYIAPEI-LLGQ---KYNHSVDWWSFGVLLYEMLIGQSPF-HGQDEEELF 227
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 114/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 97
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 157 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 201
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 202 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 114/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + +G G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G D+ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G IK+ DFG +K + T G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIKVADFGFAKRVKGR----------TWXLCG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 114/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E +I ++HP VVKL+ F+ + + +L++ G DL L + E + + + +
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYL-ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 138
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK-VMDEENYNPDHGMD 459
+ L +L+ + +I+ DLKP NILL E G IK+TDFGLSK +D E
Sbjct: 139 LALGLDHLHSLG--IIYRDLKPENILLDEE---GHIKLTDFGLSKEAIDHEKK------- 186
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
GT Y+ PE N S D WS GV+ ++ L G PF + T+
Sbjct: 187 -AYSFCGTVEYMAPEVV----NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETM-- 239
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRI 557
ILKA + +S EA+ +R+ +R+
Sbjct: 240 -TLILKA---KLGMPQFLSTEAQSLLRALFKRNPANRL 273
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 25/228 (10%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 4 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 54
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 55 EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 114 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 163
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ GT Y+ PE K + VDVWS G++ L G+ P+
Sbjct: 164 LNKMCGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+++ + G IK+TDFG +K + T G
Sbjct: 156 YLHSLD--LIYRDLKPENLMIDQQ---GYIKVTDFGFAKRVKGR----------TWXLCG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 25/228 (10%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 3 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 53
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 54 EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 113 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 162
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ GT Y+ PE K + VDVWS G++ L G+ P+
Sbjct: 163 LNKMXGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 108/226 (47%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI D GL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDAGLARHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 114/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 82
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 83 AVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 141
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 142 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWTL----------CG 186
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 187 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 228
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 20/223 (8%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G+G + V A+D + VA K + Y + LRE I
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIK------KISPFEHQTYCQRTLREIQILLR 97
Query: 348 LDHPRVVKLYDVFEIDA-NSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVVSAL 405
H V+ + D+ + V D + D Y L + + ++ + Q++ L
Sbjct: 98 FRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGL 157
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KY++ V+H DLKP N+L+ N ++KI DFGL+++ D E+ DH LT +
Sbjct: 158 KYIHSAN--VLHRDLKPSNLLI---NTTCDLKICDFGLARIADPEH---DHTGFLT-EXV 208
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + +D+WSVG I + L + F
Sbjct: 209 ATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + +G G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G D+ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G IK+ DFG +K + T G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIKVADFGFAKRVKGR----------TWXLCG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 112/228 (49%), Gaps = 27/228 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKD---WKEDKKANYIKHALREYNIHKALDH 350
+LGKG F +V A K ++ A K L KD +D + ++ + + A +H
Sbjct: 25 MLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRV----LSLAWEH 78
Query: 351 PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNE 410
P + ++ F+ N F V+EY +G DL ++++ A +++ L++L+
Sbjct: 79 PFLTHMFCTFQTKENLF-FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH- 136
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
+++ DLK NILL + G IKI DFG+ K EN D T++ GT Y
Sbjct: 137 -SKGIVYRDLKLDNILLDKD---GHIKIADFGMCK----ENMLGDAK---TNEFCGTPDY 185
Query: 471 LPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
+ PE ++G+ K + VD WS GV+ Y+ L G+ PF H Q + +
Sbjct: 186 IAPEI-LLGQ---KYNHSVDWWSFGVLLYEMLIGQSPF-HGQDEEELF 228
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 131/290 (45%), Gaps = 38/290 (13%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANY-IKHALR---EYN 343
++ LL +LG+G F +V ++ QL K KKA ++ +R E +
Sbjct: 25 QFELLKVLGQGSFGKVFLV-----KKISGSDARQLYA-MKVLKKATLKVRDRVRTKMERD 78
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
I ++HP +VKL+ F+ + + +L++ G DL L + E + + + ++
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGKLYL-ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL 137
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
AL +L+ + +I+ DLKP NILL E G IK+TDFGLSK + DH S
Sbjct: 138 ALDHLHSLG--IIYRDLKPENILLDEE---GHIKLTDFGLSK------ESIDHEKKAYSF 186
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
GT Y+ PE N + D WS GV+ ++ L G PF + T+ I
Sbjct: 187 -CGTVEYMAPEVV----NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETM---TMI 238
Query: 524 LKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRI-----DVISLARHDYL 568
LKA + +S EA+ +R +R+ V + RH +
Sbjct: 239 LKA---KLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 32/264 (12%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G G F VH + L + + VA K + ED ++I+ A + L HP++V
Sbjct: 35 IGSGQFGLVHLGYWLNKDK-VAIKTIK-EGSMSED---DFIEEA----EVMMKLSHPKLV 85
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLK-QHKTIAEREARSIVMQVVSALKYLNEIKP 413
+LY V ++ C V E+ + L YL+ Q A + + V + YL E
Sbjct: 86 QLYGVC-LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE--A 142
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH DL N L+ E V IK++DFG+++ + ++ Y G + A P
Sbjct: 143 CVIHRDLAARNCLVGENQV---IKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS------P 193
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLY-GKKPFGHNQSQATILEENTILKATEVQFA 532
E F + + SSK DVWS GV+ ++ GK P+ N+S + ++E+ +T +
Sbjct: 194 EVF----SFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVED----ISTGFRLY 244
Query: 533 NKPTVSNEAKGFIRSCLAYRKEDR 556
S + C R EDR
Sbjct: 245 KPRLASTHVYQIMNHCWKERPEDR 268
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 24/220 (10%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+GKGGF VHK +K++ VA K L E + + RE I L+HP +V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYL--KQHKTIAEREARSIVMQVVSALKYLNEIK 412
KLY + N V+E+ DL L K H + R +++ + ++Y+
Sbjct: 87 KLYGLMH---NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLR-LMLDIALGIEYMQNQN 142
Query: 413 PPVIHYDLKPGNILLTE----GNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
PP++H DL+ NI L VC K+ DFG S+ + S G +
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCA--KVADFGTSQ----------QSVHSVSGLLGNF 190
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ PE +G + K D +S +I Y L G+ PF
Sbjct: 191 QWMAPE--TIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 131/290 (45%), Gaps = 38/290 (13%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANY-IKHALR---EYN 343
++ LL +LG+G F +V ++ QL K KKA ++ +R E +
Sbjct: 26 QFELLKVLGQGSFGKVFLV-----KKISGSDARQLYA-MKVLKKATLKVRDRVRTKMERD 79
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
I ++HP +VKL+ F+ + + +L++ G DL L + E + + + ++
Sbjct: 80 ILVEVNHPFIVKLHYAFQTEGKLYL-ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL 138
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
AL +L+ + +I+ DLKP NILL E G IK+TDFGLSK + DH S
Sbjct: 139 ALDHLHSLG--IIYRDLKPENILLDEE---GHIKLTDFGLSK------ESIDHEKKAYSF 187
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
GT Y+ PE N + D WS GV+ ++ L G PF + T+ I
Sbjct: 188 -CGTVEYMAPEVV----NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETM---TMI 239
Query: 524 LKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRI-----DVISLARHDYL 568
LKA + +S EA+ +R +R+ V + RH +
Sbjct: 240 LKA---KLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 286
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ YQ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYQMAAGYPPFFADQ 242
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 33/233 (14%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV L ++ ++ + L + E ++ ++ L E +I DHP
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPN 107
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
+++L V + V EY + LD +L++H +A+ V+Q+V S +
Sbjct: 108 IIRLEGVVT-KSKPVMIVTEYMENGSLDSFLRKH------DAQFTVIQLVGMLRGIASGM 160
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KYL+++ +H DL NIL+ VC K++DFGL++V++++ P+ T G
Sbjct: 161 KYLSDMG--YVHRDLAARNILINSNLVC---KVSDFGLARVLEDD---PEAAYT-TRGGK 211
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 212 IPIRWTSPEAIAY----RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 25/228 (10%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 3 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 53
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 54 EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 113 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 162
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ GT Y+ PE K + VDVWS G++ L G+ P+
Sbjct: 163 LNKMCGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 25/228 (10%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 3 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 53
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 54 EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 113 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 162
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ GT Y+ PE K + VDVWS G++ L G+ P+
Sbjct: 163 LNKMCGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 108/226 (47%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI D GL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDGGLARHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 25/228 (10%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 3 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 53
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 54 EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 113 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 162
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ GT Y+ PE K + VDVWS G++ L G+ P+
Sbjct: 163 LNKMCGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 116/264 (43%), Gaps = 32/264 (12%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G G F VH + L + + VA K + +ED + E + L HP++V
Sbjct: 16 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEED--------FIEEAEVMMKLSHPKLV 66
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLK-QHKTIAEREARSIVMQVVSALKYLNEIKP 413
+LY V ++ C V E+ + L YL+ Q A + + V + YL E
Sbjct: 67 QLYGVC-LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE--A 123
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
VIH DL N L+ E V IK++DFG+++ + ++ Y G + A P
Sbjct: 124 CVIHRDLAARNCLVGENQV---IKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS------P 174
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLY-GKKPFGHNQSQATILEENTILKATEVQFA 532
E F + + SSK DVWS GV+ ++ GK P+ N+S + ++E+ + T +
Sbjct: 175 EVF----SFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDIS----TGFRLY 225
Query: 533 NKPTVSNEAKGFIRSCLAYRKEDR 556
S + C R EDR
Sbjct: 226 KPRLASTHVYQIMNHCWRERPEDR 249
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRIQQ 97
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + VLEY G ++ +L++ +E AR Q+V +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYM-VLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G IK+ DFG +K + + G
Sbjct: 157 YLHSLD--LIYRDLKPENLLIDQQ---GYIKVADFGFAKRVKGRTWXL----------CG 201
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 202 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 25/228 (10%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 3 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 53
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 54 EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 113 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 162
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ GT Y+ PE K + VDVWS G++ L G+ P+
Sbjct: 163 LNKMCGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 118/282 (41%), Gaps = 35/282 (12%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVA-CKVH--QLNKDWKEDKKANYIKHALREYNIHKALDHP 351
+G+G F V+K D + VA C++ +L K ++ K E K L HP
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFK--------EEAEXLKGLQHP 85
Query: 352 RVVKLYDVFEIDANSF-CTVL--EYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYL 408
+V+ YD +E C VL E L YLK+ K + RS Q++ L++L
Sbjct: 86 NIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFL 145
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+ PP+IH DLK NI +T G +KI D GL+ + GT
Sbjct: 146 HTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLATL---------KRASFAKAVIGTP 194
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATE 528
+ PE + K VDV++ G + + P+ Q+ A I T +
Sbjct: 195 EFXAPEXY-----EEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVT----SG 245
Query: 529 VQFANKPTVS-NEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
V+ A+ V+ E K I C+ K++R + L H + Q
Sbjct: 246 VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 287
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 108/226 (47%), Gaps = 28/226 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G + V AFD K VA K +L++ ++ A K RE + K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHA---KRTYRELRLLK 76
Query: 347 ALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V+ L DVF ++ + ++ + G DL+ +K K + + + ++ Q++
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQIL 135
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
LKY++ +IH DLKP N+ + E C E+KI D GL++ D+E +
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILDRGLARHTDDE----------MT 180
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + VD+WSVG I + L G+ F
Sbjct: 181 GYVATRWYRAPEIML---NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+++ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLMIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 25/228 (10%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 4 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 54
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 55 EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 114 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 163
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ GT Y+ PE K + VDVWS G++ L G+ P+
Sbjct: 164 LNKMCGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 125/292 (42%), Gaps = 37/292 (12%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
+ L+ L+G G + +V+K +K + A KV + D +E+ K +E N+ K
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK--------QEINMLKKY 77
Query: 349 DHPRVVKLYDVFEIDAN------SFCTVLEYCDGHDLDFYLKQHK--TIAEREARSIVMQ 400
H R + Y I N V+E+C + +K K T+ E I +
Sbjct: 78 SHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICRE 137
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
++ L +L++ K VIH D+K N+LLTE E+K+ DFG+S +D +
Sbjct: 138 ILRGLSHLHQHK--VIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDRT-------VGR 185
Query: 461 TSQGAGTYWYLPPECFVVGKNP-PKISSKVDVWSVGVIFYQCLYGKKPFG--HNQSQATI 517
+ GT +++ PE +NP K D+WS+G+ + G P H +
Sbjct: 186 RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL 245
Query: 518 LEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+ N + +++ K + FI SCL R L +H +++
Sbjct: 246 IPRNPAPRLKSKKWSKK------FQSFIESCLVKNHSQRPATEQLMKHPFIR 291
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + T G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGR----------TWXLCG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 24/220 (10%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+GKGGF VHK +K++ VA K L E + + RE I L+HP +V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYL--KQHKTIAEREARSIVMQVVSALKYLNEIK 412
KLY + N V+E+ DL L K H + R +++ + ++Y+
Sbjct: 87 KLYGLMH---NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLR-LMLDIALGIEYMQNQN 142
Query: 413 PPVIHYDLKPGNILLTE----GNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
PP++H DL+ NI L VC K+ DF LS+ + S G +
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCA--KVADFSLSQ----------QSVHSVSGLLGNF 190
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ PE +G + K D +S +I Y L G+ PF
Sbjct: 191 QWMAPE--TIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 97
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR Q+V +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 156
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + T G
Sbjct: 157 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGR----------TWXLCG 201
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 202 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 25/228 (10%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 3 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 53
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 54 EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 113 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 162
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ GT Y+ PE K + VDVWS G++ L G+ P+
Sbjct: 163 LNKMXGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 97
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P + KL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYM-VMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+++ + G IK+TDFG +K + + G
Sbjct: 157 YLHSLD--LIYRDLKPENLMIDQQ---GYIKVTDFGFAKRVKGRTWXL----------CG 201
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 202 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 33/233 (14%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV L ++ ++ + L + E ++ ++ L E +I DHP
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPN 107
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
+++L V + V EY + LD +L++H +A+ V+Q+V S +
Sbjct: 108 IIRLEGVVT-KSKPVMIVTEYMENGSLDSFLRKH------DAQFTVIQLVGMLRGIASGM 160
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KYL+++ +H DL NIL+ VC K++DFGL +V++++ P+ T G
Sbjct: 161 KYLSDMG--YVHRDLAARNILINSNLVC---KVSDFGLGRVLEDD---PEAAYT-TRGGK 211
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 212 IPIRWTSPEAIAY----RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ AE AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 97
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P + KL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYM-VMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+++ + G IK+TDFG +K + + G
Sbjct: 157 YLHSLD--LIYRDLKPENLMIDQQ---GYIKVTDFGFAKRVKGRTWXL----------CG 201
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 202 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 124/280 (44%), Gaps = 29/280 (10%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G G F V+ A D++ VA K + +K + IK E + L HP +
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK----EVRFLQKLRHPNTI 117
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
+ + + ++ V+EYC G D K + E E ++ + L YL+
Sbjct: 118 QYRGCY-LREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN-- 174
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPE 474
+IH D+K GNILL+E G +K+ DFG + +M N GT +++ PE
Sbjct: 175 MIHRDVKAGNILLSEP---GLVKLGDFGSASIMAPAN-----------XFVGTPYWMAPE 220
Query: 475 CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANK 534
++ + + KVDVWS+G+ + L +KP N + + L ++ +Q +
Sbjct: 221 V-ILAMDEGQYDGKVDVWSLGITCIE-LAERKPPLFNMNAMSALYHIAQNESPALQSGH- 277
Query: 535 PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL---QPP 571
S + F+ SCL +DR L +H ++ +PP
Sbjct: 278 --WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPP 315
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 97
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYM-VMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+++ + G IK+TDFG +K + + G
Sbjct: 157 YLHSLD--LIYRDLKPENLMIDQQ---GYIKVTDFGFAKRVKGRTWXL----------CG 201
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 202 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 117
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 176
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 177 YLHSLD--LIYRDLKPENLLIDQ---QGYIQVTDFGFAKRVKGATWTL----------CG 221
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 222 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 263
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V KA + + VA K +L +D ALRE + K L H +V
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRL-----DDDDEGVPSSALREICLLKELKHKNIV 64
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE-ARSIVMQVVSALKYLNEIKP 413
+L+DV D V E+CD DL Y + E +S + Q++ L + +
Sbjct: 65 RLHDVLHSD-KKLTLVFEFCD-QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN- 121
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG--TYWYL 471
V+H DLKP N+L+ N GE+K+ +FGL++ G+ + A T WY
Sbjct: 122 -VLHRDLKPQNLLI---NRNGELKLANFGLARAF---------GIPVRCYSAEVVTLWYR 168
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PP+ K S+ +D+WS G IF + +P
Sbjct: 169 PPDVLFGAK---LYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 83
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 84 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 142
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ E G I++TDFG +K + + G
Sbjct: 143 YLHSLD--LIYRDLKPENLLIDEQ---GYIQVTDFGFAKRVKGRTWXL----------CG 187
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 188 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 229
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 353 VVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
V++L D FE +SF +LE + DL ++ + + E ARS QV+ A+++ +
Sbjct: 118 VIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 176
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
V+H D+K NIL+ GE+K+ DFG ++ + Y + GT Y
Sbjct: 177 G--VLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVY---------TDFDGTRVYS 223
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQF 531
PPE + + ++ VWS+G++ Y + G PF H++ I++ Q
Sbjct: 224 PPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEE---------IIRG---QV 268
Query: 532 ANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+ VS+E + IR CLA R DR + H ++Q
Sbjct: 269 FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 117
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 176
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 177 YLHSLD--LIYRDLKPENLLIDQ---QGYIQVTDFGFAKRVKGRTWXL----------CG 221
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 222 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 263
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 109/228 (47%), Gaps = 25/228 (10%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G EV A + + VA K+ + + D E+ K +
Sbjct: 3 PFVED-WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 53
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+K L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 54 EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 113 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 162
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ GT Y+ PE K + VDVWS G++ L G+ P+
Sbjct: 163 LNKMCGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 97
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P + KL F+ ++N + V+EY G ++ +L++ E AR Q+V +
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYM-VMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 156
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+++ + G IK+TDFG +K + + G
Sbjct: 157 YLHSLD--LIYRDLKPENLMIDQQ---GYIKVTDFGFAKRVKGRTWXL----------CG 201
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 202 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + +G G F V ++ + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G IK+ DFG +K + T G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIKVADFGFAKRVKGR----------TWXLCG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 24/225 (10%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
L ++Y L +G+G + V+KA D + R VA K +L+ ED+ A+RE ++
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDA---EDEGIP--STAIREISL 72
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVMQVVS 403
K L HP +V L DV V E+ + DL L ++KT + + + + + Q++
Sbjct: 73 LKELHHPNIVSLIDVIH-SERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLR 130
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
+ + ++ + ++H DLKP N+L+ N G +K+ DFGL++ + H +
Sbjct: 131 GVAHCHQHR--ILHRDLKPQNLLI---NSDGALKLADFGLARAFGIPVRSYTHEV----- 180
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY P+ + K K S+ VD+WS+G IF + + GK F
Sbjct: 181 --VTLWYRAPDVLMGSK---KYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 33/233 (14%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV L ++ ++ + L + E ++ ++ L E +I DHP
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPN 107
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
+++L V + V E + LD +L++H +A+ V+Q+V S +
Sbjct: 108 IIRLEGVVT-KSKPVMIVTEXMENGSLDSFLRKH------DAQFTVIQLVGMLRGIASGM 160
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KYL+++ +H DL NIL+ VC K++DFGLS+V++++ P+ T G
Sbjct: 161 KYLSDMG--AVHRDLAARNILINSNLVC---KVSDFGLSRVLEDD---PEAAYT-TRGGK 211
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 212 IPIRWTSPEAIAY----RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 114/268 (42%), Gaps = 19/268 (7%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
++ Y ++ ++G+G F EV Q+ A K+ + K A + E +I
Sbjct: 74 AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFF----WEERDIM 129
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
+ P VV+L+ F+ D V+EY G DL L + + E+ A+ +VV AL
Sbjct: 130 AFANSPWVVQLFCAFQ-DDKYLYMVMEYMPGGDL-VNLMSNYDVPEKWAKFYTAEVVLAL 187
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
++ + +IH D+KP N+LL + G +K+ DFG MDE GM
Sbjct: 188 DAIHSMG--LIHRDVKPDNMLLDKH---GHLKLADFGTCMKMDET------GMVHCDTAV 236
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
GT Y+ PE + D WSVGV ++ L G PF + T +
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTY--SKIMDH 294
Query: 526 ATEVQFANKPTVSNEAKGFIRSCLAYRK 553
+ F +S AK I + L R+
Sbjct: 295 KNSLCFPEDAEISKHAKNLICAFLTDRE 322
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 24/225 (10%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
L ++Y L +G+G + V+KA D + R VA K +L+ ED+ A+RE ++
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDA---EDEGIP--STAIREISL 72
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVMQVVS 403
K L HP +V L DV V E+ + DL L ++KT + + + + + Q++
Sbjct: 73 LKELHHPNIVSLIDVIH-SERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLR 130
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
+ + ++ + ++H DLKP N+L+ N G +K+ DFGL++ + H +
Sbjct: 131 GVAHCHQHR--ILHRDLKPQNLLI---NSDGALKLADFGLARAFGIPVRSYTHEV----- 180
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY P+ + K K S+ VD+WS+G IF + + GK F
Sbjct: 181 --VTLWYRAPDVLMGSK---KYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQ---QGYIQVTDFGFAKRVKGRTWXL----------XG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 119/280 (42%), Gaps = 29/280 (10%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G G F V+ A D++ VA K + +K + IK E + L HP +
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK----EVRFLQKLRHPNTI 78
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
+ + + ++ V+EYC G D K + E E ++ + L YL+
Sbjct: 79 QYRGCY-LREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN-- 135
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPE 474
+IH D+K GNILL+E G +K+ DFG + +M N GT +++ PE
Sbjct: 136 MIHRDVKAGNILLSEP---GLVKLGDFGSASIMAPAN-----------XFVGTPYWMAPE 181
Query: 475 CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANK 534
++ + + KVDVWS+G+ + K P + + + + + E
Sbjct: 182 V-ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH----IAQNESPALQS 236
Query: 535 PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL---QPP 571
S + F+ SCL +DR L +H ++ +PP
Sbjct: 237 GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPP 276
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 121/236 (51%), Gaps = 26/236 (11%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQR-YVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
++Y+ L +G+G F + ++ R YV +++ KE +++ RE +
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESR------REVAVL 77
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSI--VMQVVS 403
+ HP +V+ + FE + S V++YC+G DL + K + +E + + +Q+
Sbjct: 78 ANMKHPNIVQYRESFE-ENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICL 136
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
ALK++++ K ++H D+K NI LT+ G +++ DFG+++V++ ++L
Sbjct: 137 ALKHVHDRK--ILHRDIKSQNIFLTKD---GTVQLGDFGIARVLNST-------VELARA 184
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
GT +YL PE + +N P ++K D+W++G + Y+ K F + +L+
Sbjct: 185 CIGTPYYLSPE---ICENKP-YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLK 236
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 124/288 (43%), Gaps = 29/288 (10%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHAL--REY 342
++D Y L +GKG FS V + L C H+ KK + H RE
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKL-------CTGHEYAAKIINTKKLSARDHQKLEREA 54
Query: 343 NIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
I + L H +V+L+D + + V + G +L + + +E +A + Q++
Sbjct: 55 RICRLLKHSNIVRLHDSISEEGFHY-LVFDLVTGGELFEDIVAREYYSEADASHCIQQIL 113
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
A+ + +++ V+H DLKP N+LL +K+ DFGL+ + + + G
Sbjct: 114 EAVLHCHQMG--VVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGF---- 166
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENT 522
AGT YL PE VD+W+ GVI Y L G PF ++ Q + ++
Sbjct: 167 --AGTPGYLSPEVL----RKEAYGKPVDIWACGVILYILLVGYPPFW-DEDQHKLYQQ-- 217
Query: 523 ILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
+KA F + TV+ EAK I L RI +H ++
Sbjct: 218 -IKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWV 264
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 97
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 157 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 201
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 202 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 97
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 157 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 201
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 202 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 97
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 157 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 201
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 202 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+++ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLIIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-IISKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 97
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 157 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 201
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 202 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 89
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 148
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + T G
Sbjct: 149 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGR----------TWXLCG 193
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 194 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 235
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 117
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR Q+V +
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 176
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 177 YLHSLD--LIYRDLKPENLLIDQ---QGYIQVTDFGFAKRVKGRTWXL----------CG 221
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 222 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 263
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 109/228 (47%), Gaps = 25/228 (10%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK--DWKEDKKANYIKHALR 340
P + D + L+ LG+G + EV A + + VA K+ + + D E+ K +
Sbjct: 4 PFVED-WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--------K 54
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E I+ L+H VVK Y + N LEYC G +L ++ + E +A+ Q
Sbjct: 55 EICINAMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++ + YL+ I + H D+KP N+LL E + +KI+DFGL+ V N L
Sbjct: 114 LMAGVVYLHGIG--ITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRE-----RL 163
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ GT Y+ PE K + VDVWS G++ L G+ P+
Sbjct: 164 LNKMCGTLPYVAPELL---KRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 52/300 (17%)
Query: 284 VLSDRYLLLMLLGKGGFSE----VHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHAL 339
V SD Y++ +G G +SE VHKA +++ Y + + +D E+ I+ L
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNME---YAVKVIDKSKRDPSEE-----IEILL 75
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
R Y HP ++ L DV++ D V E G +L + + K +EREA ++
Sbjct: 76 R-YG-----QHPNIITLKDVYD-DGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH 128
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGE-IKITDFGLSKVMDEENYNPDHGM 458
+ ++YL+ V+H DLKP NIL + + E ++I DFG +K + EN G+
Sbjct: 129 TIGKTVEYLHS--QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN-----GL 181
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSK------VDVWSVGVIFYQCLYGKKPFGHNQ 512
+T C+ P++ + D+WS+G++ Y L G PF +
Sbjct: 182 LMTP------------CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGP 229
Query: 513 SQATILEENTILKATEVQF----ANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
S E + + +F N TVS AK + L R+ + +H ++
Sbjct: 230 SDT---PEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 24/232 (10%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARSI 397
+RE + + P +V Y F D S C +E+ DG LD LK+ I E+ +
Sbjct: 55 IRELQVLHECNSPYIVGFYGAFYSDGEISIC--MEHMDGGSLDQVLKKAGRIPEQILGKV 112
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ V+ L YL E K ++H D+KP NIL+ N GEIK+ DFG+S + +E
Sbjct: 113 SIAVIKGLTYLRE-KHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDE------- 161
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATI 517
+ ++ GT Y+ PE S + D+WS+G+ + G+ P + I
Sbjct: 162 --MANEFVGTRSYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYP----RPPMAI 211
Query: 518 LEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
E + S E + F+ CL +R D+ L H +++
Sbjct: 212 FELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 263
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 33/233 (14%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV L ++ ++ + L + E ++ ++ L E +I DHP
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPN 78
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
+++L V + V E + LD +L++H +A+ V+Q+V S +
Sbjct: 79 IIRLEGVVT-KSKPVMIVTEXMENGSLDSFLRKH------DAQFTVIQLVGMLRGIASGM 131
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KYL+++ +H DL NIL+ VC K++DFGLS+V++++ P+ T G
Sbjct: 132 KYLSDMG--YVHRDLAARNILINSNLVC---KVSDFGLSRVLEDD---PEAAYT-TRGGK 182
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 183 IPIRWTSPEAIAY----RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 231
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 33/233 (14%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV L ++ ++ + L + E ++ ++ L E +I DHP
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPN 107
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
+++L V + V E + LD +L++H +A+ V+Q+V S +
Sbjct: 108 IIRLEGVVT-KSKPVMIVTEXMENGSLDSFLRKH------DAQFTVIQLVGMLRGIASGM 160
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KYL+++ +H DL NIL+ VC K++DFGLS+V++++ P+ T G
Sbjct: 161 KYLSDMG--YVHRDLAARNILINSNLVC---KVSDFGLSRVLEDD---PEAAYT-TRGGK 211
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 212 IPIRWTSPEAIAY----RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 110/238 (46%), Gaps = 23/238 (9%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV L +R VA + L + E ++ ++ L E +I DHP
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDF----LCEASIMGQFDHPN 105
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEI 411
VV L V V+E+ + LD +L++H + ++ + + ++YL ++
Sbjct: 106 VVHLEGVV-TRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADM 164
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
+H DL NIL+ VC K++DFGLS+V+++ +P+ T W
Sbjct: 165 G--YVHRDLAARNILVNSNLVC---KVSDFGLSRVIED---DPEAVYTTTGGKIPVRWTA 216
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI--LEENTILKA 526
P K +S DVWS G++ ++ + YG++P+ +Q I +EE L A
Sbjct: 217 PEAI-----QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPA 269
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 89
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR Q+V +
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 148
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + T G
Sbjct: 149 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGR----------TWXLCG 193
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 194 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 235
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 31/262 (11%)
Query: 293 MLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++LGKG + V+ DL Q +A K ++ + Y + E +HK L H
Sbjct: 28 VVLGKGTYGIVYAGRDLSNQVRIAIKE-------IPERDSRYSQPLHEEIALHKHLKHKN 80
Query: 353 VVKLYDVFEIDANSFCTV-LEYCDGHDLDFYLKQHKTIAEREARSI---VMQVVSALKYL 408
+V+ F N F + +E G L L+ + ++I Q++ LKYL
Sbjct: 81 IVQYLGSF--SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 138
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
++ + ++H D+K N+L+ G +KI+DFG SK + NP T GT
Sbjct: 139 HDNQ--IVHRDIKGDNVLIN--TYSGVLKISDFGTSKRL--AGINP-----CTETFTGTL 187
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGH-NQSQATILEENTILKAT 527
Y+ PE ++ K P D+WS+G + GK PF + QA + +
Sbjct: 188 QYMAPE--IIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP 245
Query: 528 EVQFANKPTVSNEAKGFIRSCL 549
E+ ++S EAK FI C
Sbjct: 246 EI----PESMSAEAKAFILKCF 263
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 124/278 (44%), Gaps = 29/278 (10%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G F +V+KA + + A KV + E++ +YI E I DHP +V
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIV----EIEILATCDHPYIV 79
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLD-FYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
KL + D + ++E+C G +D L+ + + E + + + Q++ AL +L+ +
Sbjct: 80 KLLGAYYHDGKLW-IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR- 137
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLK GN+L+T + G+I++ DFG+S +N D GT +++ P
Sbjct: 138 -IIHRDLKAGNVLMT---LEGDIRLADFGVSA----KNLKTLQKRD---SFIGTPYWMAP 186
Query: 474 E---CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQ 530
E C + P K D+WS+G+ + + P +L+ I K+
Sbjct: 187 EVVMCETMKDTP--YDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK---IAKSDPPT 241
Query: 531 FANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
S E + F++ L E R L H ++
Sbjct: 242 LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 111/240 (46%), Gaps = 28/240 (11%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+ + LL +LG G + +V + ++ K +KA +H E +
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV-- 111
Query: 347 ALDH----PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
L+H P +V L+ F+ + +L+Y +G +L +L Q + E E + V ++V
Sbjct: 112 -LEHIRQSPFLVTLHYAFQTE-TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIV 169
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK--VMDEENYNPDHGMDL 460
AL++L+ K +I+ D+K NILL + G + +TDFGLSK V DE D
Sbjct: 170 LALEHLH--KLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVADETERAYDF---- 220
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF---GHNQSQATI 517
GT Y+ P+ +V VD WS+GV+ Y+ L G PF G SQA I
Sbjct: 221 ----CGTIEYMAPD--IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI 274
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 26/226 (11%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G+G + V A+D + VA K + Y + LRE I A
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLA 79
Query: 348 LDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVVS 403
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQILR 137
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLTS 462
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH +
Sbjct: 138 GLKYIHSAN--VLHRDLKPSNLLL---NTTSDLKICDFGLARVAD-----PDHDHTGFLT 187
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ T WY PE + N + +D+WSVG I + L + F
Sbjct: 188 EYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 91
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR Q+V +
Sbjct: 92 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 150
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 151 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 195
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 196 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 237
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 52/300 (17%)
Query: 284 VLSDRYLLLMLLGKGGFSE----VHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHAL 339
V SD Y++ +G G +SE VHKA +++ Y + + +D E+ I+ L
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNME---YAVKVIDKSKRDPSEE-----IEILL 75
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
R Y HP ++ L DV++ D V E G +L + + K +EREA ++
Sbjct: 76 R-YG-----QHPNIITLKDVYD-DGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH 128
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGE-IKITDFGLSKVMDEENYNPDHGM 458
+ ++YL+ V+H DLKP NIL + + E ++I DFG +K + EN G+
Sbjct: 129 TIGKTVEYLHS--QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN-----GL 181
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSK------VDVWSVGVIFYQCLYGKKPFGHNQ 512
+T C+ P++ + D+WS+G++ Y L G PF +
Sbjct: 182 LMTP------------CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGP 229
Query: 513 SQATILEENTILKATEVQF----ANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
S E + + +F N TVS AK + L R+ + +H ++
Sbjct: 230 SDT---PEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 29/238 (12%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDH 350
LM+LGKG F +V A + A K+ + + ++D ++ + E + LD
Sbjct: 23 FLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDD----VECTMVEKRVLALLDK 78
Query: 351 P-RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
P + +L+ F+ + V+EY +G DL ++++Q E +A ++ L +L+
Sbjct: 79 PPFLTQLHSCFQT-VDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLH 137
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD--LTSQGAGT 467
K +I+ DLK N++L G IKI DFG+ K +H MD T + GT
Sbjct: 138 --KRGIIYRDLKLDNVMLDSE---GHIKIADFGMCK---------EHMMDGVTTREFCGT 183
Query: 468 YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQA--TILEENT 522
Y+ PE ++ P VD W+ GV+ Y+ L G+ PF G ++ + +I+E N
Sbjct: 184 PDYIAPE--IIAYQP--YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T YL PE ++ K K VD W++GV+ Y+ G PF
Sbjct: 201 TPEYLAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPF 238
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 22/176 (12%)
Query: 341 EYNIHKALDHPRVVKLYD-VFEIDANSFCTVLEYCDGHDLDFYL----KQHKTIAEREAR 395
E N+ + L HP +V+ YD + + + V+EYC+G DL + K+ + + E
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 396 SIVMQVVSALKYLNEIKP---PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENY 452
++ Q+ ALK + V+H DLKP N+ L +K+ DFGL++++
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ---NVKLGDFGLARIL----- 166
Query: 453 NPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+H D + GT +Y+ PE N + K D+WS+G + Y+ PF
Sbjct: 167 --NHDEDFAKEFVGTPYYMSPEQM----NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 124/278 (44%), Gaps = 29/278 (10%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G F +V+KA + + A KV + E++ +YI E I DHP +V
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYI----VEIEILATCDHPYIV 71
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLD-FYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
KL + D + ++E+C G +D L+ + + E + + + Q++ AL +L+ +
Sbjct: 72 KLLGAYYHDGKLW-IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR- 129
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH DLK GN+L+T + G+I++ DFG+S +N D GT +++ P
Sbjct: 130 -IIHRDLKAGNVLMT---LEGDIRLADFGVSA----KNLKTLQKRD---SFIGTPYWMAP 178
Query: 474 E---CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQ 530
E C + P K D+WS+G+ + + P +L+ I K+
Sbjct: 179 EVVMCETMKDTP--YDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK---IAKSDPPT 233
Query: 531 FANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
S E + F++ L E R L H ++
Sbjct: 234 LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 107/228 (46%), Gaps = 25/228 (10%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQ----LNKDWKEDKKANYIKHALRE 341
S +Y + LG G F V A D ++ + V K + L W ED K + E
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVT---LE 79
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLE-YCDGHDLDFYLKQHKTIAEREARSIVMQ 400
I ++H ++K+ D+FE + F V+E + G DL ++ +H + E A I Q
Sbjct: 80 IAILSRVEHANIIKVLDIFE-NQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+VSA+ YL +IH D+K NI++ E IK+ DFG + ++ L
Sbjct: 139 LVSAVGYLR--LKDIIHRDIKDENIVIAEDFT---IKLIDFGSAAYLERGK--------L 185
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
GT Y PE V+ NP + ++++WS+GV Y ++ + PF
Sbjct: 186 FYTFCGTIEYCAPE--VLMGNPYR-GPELEMWSLGVTLYTLVFEENPF 230
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 19/227 (8%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV L +R + + L + E ++ ++ L E +I DHP
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDF----LSEASIMGQFDHPN 95
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEI 411
V+ L V + + E+ + LD +L+Q+ + ++ + + +KYL ++
Sbjct: 96 VIHLEGVVT-KSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM 154
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
+H DL NIL+ VC K++DFGLS+ ++++ +P + L G +
Sbjct: 155 N--YVHRDLAARNILVNSNLVC---KVSDFGLSRFLEDDTSDPTYTSALG--GKIPIRWT 207
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 208 APEAI----QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI 250
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + + + K+ E + +RE +I K L H +V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL------EKEDEGIPSTTIREISILKELKHSNIV 63
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER-EARSIVMQVVSALKYLNEIKP 413
KLYDV V E+ D DL L + E A+S ++Q+++ + Y ++ +
Sbjct: 64 KLYDVIH-TKKRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR- 120
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
V+H DLKP N+L+ N GE+KI DFGL++ H + T WY P
Sbjct: 121 -VLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEIV-------TLWYRAP 169
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ + K K S+ +D+WSVG IF + + G F
Sbjct: 170 DVLMGSK---KYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 103/233 (44%), Gaps = 31/233 (13%)
Query: 281 NHPVL--SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA 338
+ P++ SDRY + +G G F D + VA K + + A ++
Sbjct: 12 DMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIE--------RGAAIDENV 63
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
RE H++L HP +V+ +V + ++EY G +L + +E EAR
Sbjct: 64 QREIINHRSLRHPNIVRFKEVI-LTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFF 122
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGM 458
Q++S + Y + ++ + H DLK N LL +G+ +KI DFG SK
Sbjct: 123 QQLLSGVSYCHSMQ--ICHRDLKLENTLL-DGSPAPRLKICDFGYSK-----------SS 168
Query: 459 DLTSQ---GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
L SQ GT Y+ PE + + KI+ DVWS GV Y L G PF
Sbjct: 169 VLHSQPKSTVGTPAYIAPEVLLRQEYDGKIA---DVWSCGVTLYVMLVGAYPF 218
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 31/262 (11%)
Query: 293 MLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++LGKG + V+ DL Q +A K ++ + Y + E +HK L H
Sbjct: 14 VVLGKGTYGIVYAGRDLSNQVRIAIKE-------IPERDSRYSQPLHEEIALHKHLKHKN 66
Query: 353 VVKLYDVFEIDANSFCTV-LEYCDGHDLDFYLKQHKTIAEREARSI---VMQVVSALKYL 408
+V+ F N F + +E G L L+ + ++I Q++ LKYL
Sbjct: 67 IVQYLGSFS--ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 124
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
++ + ++H D+K N+L+ G +KI+DFG SK + NP T GT
Sbjct: 125 HDNQ--IVHRDIKGDNVLIN--TYSGVLKISDFGTSKRL--AGINP-----CTETFTGTL 173
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGH-NQSQATILEENTILKAT 527
Y+ PE ++ K P D+WS+G + GK PF + QA + +
Sbjct: 174 QYMAPE--IIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP 231
Query: 528 EVQFANKPTVSNEAKGFIRSCL 549
E+ ++S EAK FI C
Sbjct: 232 EI----PESMSAEAKAFILKCF 249
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 128/268 (47%), Gaps = 25/268 (9%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALRE-YNIHKALD 349
++ ++G+G F EV +R A K+ LNK W+ K+A RE ++ D
Sbjct: 94 IIKVIGRGAFGEVAVVKMKNTERIYAMKI--LNK-WEMLKRAE--TACFREERDVLVNGD 148
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYL 408
+ L+ F+ D N V++Y G DL L + + + E AR + ++V A+ +
Sbjct: 149 CQWITALHYAFQ-DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 207
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+++ +H D+KP N+LL +V G I++ DFG M+ D G +S GT
Sbjct: 208 HQLH--YVHRDIKPDNVLL---DVNGHIRLADFGSCLKMN------DDGTVQSSVAVGTP 256
Query: 469 WYLPPECF-VVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKAT 527
Y+ PE + K + D WS+GV Y+ LYG+ PF +++ + I+
Sbjct: 257 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF---YAESLVETYGKIMNHE 313
Query: 528 E-VQFANKPT-VSNEAKGFIRSCLAYRK 553
E QF + T VS EAK I+ + R+
Sbjct: 314 ERFQFPSHVTDVSEEAKDLIQRLICSRE 341
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + + + K+ E + +RE +I K L H +V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL------EKEDEGIPSTTIREISILKELKHSNIV 63
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER-EARSIVMQVVSALKYLNEIKP 413
KLYDV V E+ D DL L + E A+S ++Q+++ + Y ++ +
Sbjct: 64 KLYDVIH-TKKRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR- 120
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
V+H DLKP N+L+ N GE+KI DFGL++ H + T WY P
Sbjct: 121 -VLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEVV-------TLWYRAP 169
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ + K K S+ +D+WSVG IF + + G F
Sbjct: 170 DVLMGSK---KYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 103/239 (43%), Gaps = 28/239 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARSI 397
+RE + + P +V Y F D S C +E+ DG LD LK+ I E+ +
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISIC--MEHMDGGSLDQVLKKAGRIPEQILGKV 109
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ V+ L YL E K ++H D+KP NIL+ N GEIK+ DFG+S + + N
Sbjct: 110 SIAVIKGLTYLRE-KHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---- 161
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATI 517
GT Y+ PE S + D+WS+G+ + G+ P ++
Sbjct: 162 -----SFVGTRSYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDS 212
Query: 518 LEENTILKATEVQFANKP-------TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I + + N+P S E + F+ CL +R D+ L H +++
Sbjct: 213 RPPMAIFELLD-YIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 270
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T YL P ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEYLAP-AIILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 24/225 (10%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G+G + V A+D + VA K + Y + LRE I
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLR 97
Query: 348 LDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSA 404
H ++ + D+ I+ ++ + G DL + L + + ++ + Q++
Sbjct: 98 FRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADL-YKLLKTQHLSNDHICYFLYQILRG 156
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLTSQ 463
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH ++
Sbjct: 157 LKYIHSAN--VLHRDLKPSNLLL---NTTXDLKICDFGLARVAD-----PDHDHTGFLTE 206
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + N + +D+WSVG I + L + F
Sbjct: 207 YVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 119/262 (45%), Gaps = 38/262 (14%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G G + V A D + VA K +L++ ++ + + K A RE + K + H V+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSE---IFAKRAYRELLLLKHMQHENVI 104
Query: 355 KLYDVFEIDAN-----SFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
L DVF ++ F V+ + D +E + + +V Q++ LKY++
Sbjct: 105 GLLDVFTPASSLRNFYDFYLVMPFMQT---DLQKIMGMEFSEEKIQYLVYQMLKGLKYIH 161
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
V+H DLKPGN+ + E C E+KI DFGL++ D E + T W
Sbjct: 162 SAG--VVHRDLKPGNLAVNED--C-ELKILDFGLARHADAE----------MTGYVVTRW 206
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEV 529
Y PE + + + VD+WSVG I + L GK F + + + + ILK T V
Sbjct: 207 YRAPEVILSWMH---YNQTVDIWSVGCIMAEMLTGKTLF---KGKDYLDQLTQILKVTGV 260
Query: 530 ---QFANKPTVSNEAKGFIRSC 548
+F K AK +I+S
Sbjct: 261 PGTEFVQKLN-DKAAKSYIQSL 281
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + + + K+ E + +RE +I K L H +V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL------EKEDEGIPSTTIREISILKELKHSNIV 63
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER-EARSIVMQVVSALKYLNEIKP 413
KLYDV V E+ D DL L + E A+S ++Q+++ + Y ++ +
Sbjct: 64 KLYDVIH-TKKRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR- 120
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
V+H DLKP N+L+ N GE+KI DFGL++ H + T WY P
Sbjct: 121 -VLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEVV-------TLWYRAP 169
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ + K K S+ +D+WSVG IF + + G F
Sbjct: 170 DVLMGSK---KYSTTIDIWSVGCIFAEMVNGAPLF 201
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 127/268 (47%), Gaps = 25/268 (9%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALRE-YNIHKALD 349
++ ++G+G F EV +R A K+ LNK W+ K+A RE ++ D
Sbjct: 78 IIKVIGRGAFGEVAVVKMKNTERIYAMKI--LNK-WEMLKRAE--TACFREERDVLVNGD 132
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL-KQHKTIAEREARSIVMQVVSALKYL 408
+ L+ F+ D N V++Y G DL L K + E AR + ++V A+ +
Sbjct: 133 CQWITALHYAFQ-DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 191
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+++ +H D+KP N+LL +V G I++ DFG M+ D G +S GT
Sbjct: 192 HQLH--YVHRDIKPDNVLL---DVNGHIRLADFGSCLKMN------DDGTVQSSVAVGTP 240
Query: 469 WYLPPECF-VVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKAT 527
Y+ PE + K + D WS+GV Y+ LYG+ PF +++ + I+
Sbjct: 241 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF---YAESLVETYGKIMNHE 297
Query: 528 E-VQFANKPT-VSNEAKGFIRSCLAYRK 553
E QF + T VS EAK I+ + R+
Sbjct: 298 ERFQFPSHVTDVSEEAKDLIQRLICSRE 325
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 26/226 (11%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G+G + V A+D + VA K + Y + LRE I A
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLA 79
Query: 348 LDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVVS 403
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQILR 137
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLTS 462
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH +
Sbjct: 138 GLKYIHSAN--VLHRDLKPSNLLL---NTTCDLKICDFGLARVAD-----PDHDHTGFLT 187
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ T WY PE + N + +D+WSVG I + L + F
Sbjct: 188 EYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 40/240 (16%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVAC-KVHQLNKDWKEDKKANYIKHALREYNIH 345
D Y + L+G+G + V+ A+D + VA KV+++ +D + K+ LRE I
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKR------ILREITIL 81
Query: 346 KALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQV 401
L +++L+D+ + + VLE D DL K + E+ ++I+ +
Sbjct: 82 NRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEQHVKTILYNL 140
Query: 402 VSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEEN---------- 451
+ K+++E +IH DLKP N LL + C +KI DFGL++ ++ +
Sbjct: 141 LLGEKFIHE--SGIIHRDLKPANCLLNQD--CS-VKICDFGLARTINSDKDIHIVNDLEE 195
Query: 452 ---------YNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
+N + LTS T WY PE ++ +N ++ +D+WS G IF + L
Sbjct: 196 KEENEEPGPHNKNLKKQLTSH-VVTRWYRAPELILLQEN---YTNSIDIWSTGCIFAELL 251
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 31/238 (13%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA--LREYN 343
+ RY + +G G + V+KA D +VA K ++ + +E + ++ LR
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV-PNGEEGLPISTVREVALLRRL- 60
Query: 344 IHKALDHPRVVKLYDVFEIDANS----FCTVLEYCDGHDLDFYLKQHKT--IAEREARSI 397
+A +HP VV+L DV V E+ D DL YL + + + +
Sbjct: 61 --EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDL 117
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ Q + L +L+ ++H DLKP NIL+T G G +K+ DFGL+++ Y+
Sbjct: 118 MRQFLRGLDFLHANC--IVHRDLKPENILVTSG---GTVKLADFGLARI-----YSYQMA 167
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
+D T WY PE + ++ VD+WSVG IF + ++ +KP S+A
Sbjct: 168 LDPV---VVTLWYRAPEVLLQS----TYATPVDMWSVGCIFAE-MFRRKPLFCGNSEA 217
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 30/239 (12%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
+ RY + +G G + V+KA D +VA K ++ +RE +
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPN--GGGGGGGLPISTVREVALL 65
Query: 346 K---ALDHPRVVKLYDVFEIDANS----FCTVLEYCDGHDLDFYLKQHKT--IAEREARS 396
+ A +HP VV+L DV V E+ D DL YL + + +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKD 124
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
++ Q + L +L+ ++H DLKP NIL+T G G +K+ DFGL+++ +
Sbjct: 125 LMRQFLRGLDFLHANC--IVHRDLKPENILVTSG---GTVKLADFGLARIY-------SY 172
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
M LT T WY PE + ++ VD+WSVG IF + ++ +KP S+A
Sbjct: 173 QMALTPV-VVTLWYRAPEVLLQS----TYATPVDMWSVGCIFAE-MFRRKPLFCGNSEA 225
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 104/242 (42%), Gaps = 37/242 (15%)
Query: 351 PRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQH--KTIAEREARSIVMQVVSAL 405
P +V + DV+E ++E +G +L +++ + EREA I+ + +A+
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK-----VMDEENYNPDHGMDL 460
++L+ + H D+KP N+L T +K+TDFG +K + Y P
Sbjct: 142 QFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTP------ 193
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
+Y+ PE V+G P K D+WS+GVI Y L G PF N QA
Sbjct: 194 --------YYVAPE--VLG--PEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM 241
Query: 521 NTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ-----PPVP 573
++ + F N VS +AK IR L +R+ + H ++ P P
Sbjct: 242 KRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTP 301
Query: 574 KH 575
H
Sbjct: 302 LH 303
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 38/261 (14%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G G + V A D + VA K +L++ ++ + + K A RE + K + H V+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSE---IFAKRAYRELLLLKHMQHENVI 86
Query: 355 KLYDVFEIDAN-----SFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
L DVF ++ F V+ + D +E + + +V Q++ LKY++
Sbjct: 87 GLLDVFTPASSLRNFYDFYLVMPFMQT---DLQKIMGLKFSEEKIQYLVYQMLKGLKYIH 143
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
V+H DLKPGN+ + E C E+KI DFGL++ D E + T W
Sbjct: 144 SAG--VVHRDLKPGNLAVNED--C-ELKILDFGLARHADAE----------MTGYVVTRW 188
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEV 529
Y PE + + + VD+WSVG I + L GK F + + + + ILK T V
Sbjct: 189 YRAPEVILSWMH---YNQTVDIWSVGCIMAEMLTGKTLF---KGKDYLDQLTQILKVTGV 242
Query: 530 ---QFANKPTVSNEAKGFIRS 547
+F K AK +I+S
Sbjct: 243 PGTEFVQKLN-DKAAKSYIQS 262
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 43/281 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+GKG F EV K D + Q+ VA K+ L + E + +E + D P V
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ------QEITVLSQCDSPYVT 83
Query: 355 KLYDVFEIDANSFCTVLEYCDGHD-LDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
K Y + D ++EY G LD L + + E + +I+ +++ L YL+ K
Sbjct: 84 KYYGSYLKDTK-LWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKK 140
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
IH D+K N+LL+E GE+K+ DFG++ + + + GT +++ P
Sbjct: 141 --IHRDIKAANVLLSEH---GEVKLADFGVAGQLTDTQIK-------RNXFVGTPFWMAP 188
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFG--HNQSQATILEENTILKATEVQF 531
E SK D+WS+G+ + G+ P H ++ +N
Sbjct: 189 EVI----KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN---------- 234
Query: 532 ANKPTV----SNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
N PT+ S K F+ +CL R L +H ++
Sbjct: 235 -NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 27/237 (11%)
Query: 351 PRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQH--KTIAEREARSIVMQVVSAL 405
P +V + DV+E ++E +G +L +++ + EREA I+ + +A+
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
++L+ + H D+KP N+L T +K+TDFG +K + +
Sbjct: 123 QFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK---------ETTQNALQTPC 171
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
T +Y+ PE V+G P K D+WS+GVI Y L G PF N QA ++
Sbjct: 172 YTPYYVAPE--VLG--PEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIR 227
Query: 526 ATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ-----PPVPKH 575
+ F N VS +AK IR L +R+ + H ++ P P H
Sbjct: 228 LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLH 284
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 32/238 (13%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
+Y L +G+G F EV KA K + VA L K E++K + ALRE I +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVA-----LKKVLMENEKEGFPITALREIKILQL 73
Query: 348 LDHPRVVKLYDVFEIDAN-------SFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVM 399
L H VV L ++ A+ S V ++C+ HDL L E + ++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMD-EENYNPDHGM 458
+++ L Y++ K ++H D+K N+L+T G +K+ DFGL++ +N P+
Sbjct: 133 MLLNGLYYIHRNK--ILHRDMKAANVLITRD---GVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 459 DLTSQGAGTYWYLPPECFVVGKN--PPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQ 514
+ T WY PPE + ++ PP +D+W G I + ++ + P ++
Sbjct: 188 NRVV----TLWYRPPELLLGERDYGPP-----IDLWGAGCIMAE-MWTRSPIMQGNTE 235
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 107/246 (43%), Gaps = 38/246 (15%)
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
HP ++ L DV++ D V E G +L + + K +EREA +++ + ++YL+
Sbjct: 75 HPNIITLKDVYD-DGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGE-IKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
V+H DLKP NIL + + E I+I DFG +K + EN G+ +T
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN-----GLLMTP------ 180
Query: 469 WYLPPECFVVGKNPPKI------SSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENT 522
C+ P++ + D+WS+GV+ Y L G PF + E
Sbjct: 181 ------CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT---PEEI 231
Query: 523 ILKATEVQFANKP----TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL----QPPVPK 574
+ + +F+ +VS+ AK + L R+ + RH ++ Q P +
Sbjct: 232 LARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQ 291
Query: 575 HGRQSA 580
RQ A
Sbjct: 292 LNRQDA 297
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 22/223 (9%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D + + +LGKG F +V A + A KV + + ++D ++ + E I
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDD----VECTMTEKRILS 78
Query: 347 -ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
A +HP + +L+ F+ F V+E+ +G DL F++++ + E AR +++SAL
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLF-FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISAL 137
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
+L++ +I+ DLK N+LL C K+ DFG+ K E N G+ T+
Sbjct: 138 MFLHD--KGIIYRDLKLDNVLLDHEGHC---KLADFGMCK---EGICN---GVT-TATFC 185
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
GT Y+ PE P VD W++GV+ Y+ L G PF
Sbjct: 186 GTPDYIAPEILQEMLYGP----AVDWWAMGVLLYEMLCGHAPF 224
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 24/226 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D++ + LG G F V + + A K+ L+K ++ K I+H L E I +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI--LDK--QKVVKLKQIEHTLNEKRILQ 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
A++ P +VKL F+ ++N + V+EY G ++ +L++ +E AR Q+V +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + +I+ DLKP N+L+ + G I++TDFG +K + + G
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWXL----------CG 200
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
T L PE ++ K K VD W++GV+ Y+ G PF +Q
Sbjct: 201 TPEALAPEI-ILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 110/233 (47%), Gaps = 33/233 (14%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV L +R + + L + E ++ ++ L E +I DHP
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPN 84
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
++ L V + V EY + LD +LK++ + + V+Q+V + +
Sbjct: 85 IIHLEGVVT-KSKPVMIVTEYMENGSLDTFLKKN------DGQFTVIQLVGMLRGISAGM 137
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KYL+++ +H DL NIL+ VC K++DFGLS+V+++ +P+ T G
Sbjct: 138 KYLSDMG--YVHRDLAARNILINSNLVC---KVSDFGLSRVLED---DPEAAYT-TRGGK 188
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 189 IPIRWTAPEAIAF----RKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVI 237
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 33/233 (14%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV + +R + + L + + ++ ++ L E +I DHP
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF----LSEASIMGQFDHPN 91
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
++ L V + EY + LD +L+++ + R V+Q+V S +
Sbjct: 92 IIHLEGVVT-KCKPVMIITEYMENGSLDAFLRKN------DGRFTVIQLVGMLRGIGSGM 144
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KYL+++ +H DL NIL+ VC K++DFG+S+V+++ +P+ T G
Sbjct: 145 KYLSDMS--AVHRDLAARNILVNSNLVC---KVSDFGMSRVLED---DPEAAYT-TRGGK 195
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 196 IPIRWTAPEAIAY----RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 244
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 31/238 (13%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA--LREYN 343
+ RY + +G G + V+KA D +VA K ++ + +E + ++ LR
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV-PNGEEGLPISTVREVALLRRL- 60
Query: 344 IHKALDHPRVVKLYDVFEIDANS----FCTVLEYCDGHDLDFYLKQHKT--IAEREARSI 397
+A +HP VV+L DV V E+ D DL YL + + + +
Sbjct: 61 --EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDL 117
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ Q + L +L+ ++H DLKP NIL+T G G +K+ DFGL+++ +
Sbjct: 118 MRQFLRGLDFLHANC--IVHRDLKPENILVTSG---GTVKLADFGLARIY-------SYQ 165
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
M L T WY PE + ++ VD+WSVG IF + ++ +KP S+A
Sbjct: 166 MALAPV-VVTLWYRAPEVLLQS----TYATPVDMWSVGCIFAE-MFRRKPLFCGNSEA 217
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 68
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ D DL ++ I +S + Q++ L + + +
Sbjct: 69 KLLDVIHTE-NKLYLVFEHVD-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 127 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRA 174
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 175 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 43/281 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+GKG F EV K D + Q+ VA K+ L + E + +E + D P V
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ------QEITVLSQCDSPYVT 68
Query: 355 KLYDVFEIDANSFCTVLEYCDGHD-LDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
K Y + D ++EY G LD L + + E + +I+ +++ L YL+ K
Sbjct: 69 KYYGSYLKDTK-LWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
IH D+K N+LL+E GE+K+ DFG++ + + + GT +++ P
Sbjct: 126 --IHRDIKAANVLLSEH---GEVKLADFGVAGQLTDTQIK-------RNXFVGTPFWMAP 173
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFG--HNQSQATILEENTILKATEVQF 531
E SK D+WS+G+ + G+ P H ++ +N
Sbjct: 174 EVI----KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN---------- 219
Query: 532 ANKPTV----SNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
N PT+ S K F+ +CL R L +H ++
Sbjct: 220 -NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 43/281 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+GKG F EV K D + Q+ VA K+ L + E + +E + D P V
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ------QEITVLSQCDSPYVT 68
Query: 355 KLYDVFEIDANSFCTVLEYCDGHD-LDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
K Y + D ++EY G LD L + + E + +I+ +++ L YL+ K
Sbjct: 69 KYYGSYLKDTK-LWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
IH D+K N+LL+E GE+K+ DFG++ + + + GT +++ P
Sbjct: 126 --IHRDIKAANVLLSEH---GEVKLADFGVAGQLTDTQIK-------RNTFVGTPFWMAP 173
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFG--HNQSQATILEENTILKATEVQF 531
E SK D+WS+G+ + G+ P H ++ +N
Sbjct: 174 EVI----KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN---------- 219
Query: 532 ANKPTV----SNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
N PT+ S K F+ +CL R L +H ++
Sbjct: 220 -NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 120/281 (42%), Gaps = 43/281 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+GKG F EV K D + Q+ VA K+ L + E + +E + D P V
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ------QEITVLSQCDSPYVT 88
Query: 355 KLYDVFEIDANSFCTVLEYCDGHD-LDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
K Y + D + ++EY G LD L + + E + +I+ +++ L YL+ K
Sbjct: 89 KYYGSYLKDTKLWI-IMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKK 145
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
IH D+K N+LL+E GE+K+ DFG++ + + + GT +++ P
Sbjct: 146 --IHRDIKAANVLLSEH---GEVKLADFGVAGQLTDTQIK-------RNTFVGTPFWMAP 193
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFG--HNQSQATILEENTILKATEVQF 531
E SK D+WS+G+ + G+ P H ++ +N
Sbjct: 194 EVI----KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN---------- 239
Query: 532 ANKPTV----SNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
N PT+ S K F+ +CL R L +H ++
Sbjct: 240 -NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 68
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVMQVVSALKYLNEIKP 413
KL DV + N V E+ DF T I +S + Q++ L + + +
Sbjct: 69 KLLDVIHTE-NKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 126
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY P
Sbjct: 127 -VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRAP 175
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K S+ VD+WS+G IF + + + F
Sbjct: 176 EILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 28/227 (12%)
Query: 288 RYLLLMLLGKGGFSEVHKAFD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
RY L +G+G + V A+D L + R K+ + Y + LRE I
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-------EHQTYXQRTLREIKILL 80
Query: 347 ALDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVV 402
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLT 461
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH
Sbjct: 139 RGLKYIHSAN--VLHRDLKPSNLLL---NTTXDLKICDFGLARVAD-----PDHDHTGFL 188
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ T WY PE + N + +D+WSVG I + L + F
Sbjct: 189 TEYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 28/227 (12%)
Query: 288 RYLLLMLLGKGGFSEVHKAFD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
RY L +G+G + V A+D L + R K+ + Y + LRE I
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-------EHQTYCQRTLREIKILL 80
Query: 347 ALDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVV 402
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLT 461
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH
Sbjct: 139 RGLKYIHSAN--VLHRDLKPSNLLL---NTTXDLKICDFGLARVAD-----PDHDHTGFL 188
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ T WY PE + N + +D+WSVG I + L + F
Sbjct: 189 TEYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 28/227 (12%)
Query: 288 RYLLLMLLGKGGFSEVHKAFD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
RY L +G+G + V A+D L + R K+ + Y + LRE I
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-------EHQTYCQRTLREIKILL 74
Query: 347 ALDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVV 402
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 75 RFRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQIL 132
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLT 461
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH
Sbjct: 133 RGLKYIHSAN--VLHRDLKPSNLLL---NTTCDLKICDFGLARVAD-----PDHDHTGFL 182
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ T WY PE + N + +D+WSVG I + L + F
Sbjct: 183 TEYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 33/233 (14%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV + +R + + L + + ++ ++ L E +I DHP
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF----LSEASIMGQFDHPN 76
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
++ L V + EY + LD +L+++ + R V+Q+V S +
Sbjct: 77 IIHLEGVVT-KCKPVMIITEYMENGSLDAFLRKN------DGRFTVIQLVGMLRGIGSGM 129
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KYL+++ +H DL NIL+ VC K++DFG+S+V++++ P+ T G
Sbjct: 130 KYLSDMS--YVHRDLAARNILVNSNLVC---KVSDFGMSRVLEDD---PEAAYT-TRGGK 180
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 181 IPIRWTAPEAIAY----RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 229
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 67
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVMQVVSALKYLNEIKP 413
KL DV + N V E+ DF T I +S + Q++ L + + +
Sbjct: 68 KLLDVIHTE-NKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 125
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY P
Sbjct: 126 -VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRAP 174
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K S+ VD+WS+G IF + + + F
Sbjct: 175 EILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 28/227 (12%)
Query: 288 RYLLLMLLGKGGFSEVHKAFD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
RY L +G+G + V A+D L + R K+ + Y + LRE I
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPF-------EHQTYCQRTLREIKILL 80
Query: 347 ALDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVV 402
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLT 461
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH
Sbjct: 139 RGLKYIHSAN--VLHRDLKPSNLLL---NTTCDLKICDFGLARVAD-----PDHDHTGFL 188
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ T WY PE + N + +D+WSVG I + L + F
Sbjct: 189 TEYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G+G + V A+D + VA K + Y + LRE I
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLR 77
Query: 348 LDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVVS 403
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLTS 462
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH +
Sbjct: 136 GLKYIHSAN--VLHRDLKPSNLLL---NTTXDLKIXDFGLARVAD-----PDHDHTGFLT 185
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ T WY PE + N + +D+WSVG I + L + F
Sbjct: 186 EYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 130/289 (44%), Gaps = 38/289 (13%)
Query: 270 RIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKED 329
R+H ED + +L ++G+G F EV + A K+ LNK W+
Sbjct: 70 RLHRED-------------FEILKVIGRGAFGEVAVVKLKNADKVFAMKI--LNK-WEML 113
Query: 330 KKANYIKHALRE-YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT 388
K+A RE ++ D + L+ F+ D N + + Y G L K
Sbjct: 114 KRAE--TACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR 171
Query: 389 IAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFG-LSKVM 447
+ E AR + ++V A+ ++++ +H D+KP NIL+ ++ G I++ DFG K+M
Sbjct: 172 LPEEMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILM---DMNGHIRLADFGSCLKLM 226
Query: 448 DEENYNPDHGMDLTSQGAGTYWYLPPECF-VVGKNPPKISSKVDVWSVGVIFYQCLYGKK 506
++ G +S GT Y+ PE + + + D WS+GV Y+ LYG+
Sbjct: 227 ED-------GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGET 279
Query: 507 PFGHNQSQATILEENTILKATE-VQFANKPT-VSNEAKGFIRSCLAYRK 553
PF +++ + I+ E QF + T VS AK IR + R+
Sbjct: 280 PF---YAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSRE 325
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 131/307 (42%), Gaps = 46/307 (14%)
Query: 275 DQSRFNNHPV-LSD-RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKA 332
DQS F V L + R + +L +GGF+ V++A D+ R A K +L + +E +A
Sbjct: 14 DQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALK--RLLSNEEEKNRA 71
Query: 333 NYIKHALREYNIHKALD-HPRVVKLYDVFEIDANS-------FCTVLEYCDGHDLDFY-- 382
++E K L HP +V+ I F + E C G ++F
Sbjct: 72 -----IIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKK 126
Query: 383 LKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFG 442
++ ++ I Q A+++++ KPP+IH DLK N+LL+ G IK+ DFG
Sbjct: 127 MESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQ---GTIKLCDFG 183
Query: 443 LSKVMDEENYNPDHGMDLTSQGA--------GTYWYLPPECFVVGKNPPKISSKVDVWSV 494
+ + ++ PD+ + T Y PE + N P I K D+W++
Sbjct: 184 SATTI---SHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFP-IGEKQDIWAL 239
Query: 495 GVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKP--TVSNEAKGFIRSCLAYR 552
G I Y + + PF E+ L+ +++ P T IR+ L
Sbjct: 240 GCILYLLCFRQHPF----------EDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVN 289
Query: 553 KEDRIDV 559
E+R+ +
Sbjct: 290 PEERLSI 296
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 28/227 (12%)
Query: 288 RYLLLMLLGKGGFSEVHKAFD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
RY L +G+G + V A+D L + R K+ + Y + LRE I
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-------EHQTYCQRTLREIKILL 81
Query: 347 ALDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVV 402
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 82 RFRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQIL 139
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLT 461
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH
Sbjct: 140 RGLKYIHSAN--VLHRDLKPSNLLL---NTTCDLKICDFGLARVAD-----PDHDHTGFL 189
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ T WY PE + N + +D+WSVG I + L + F
Sbjct: 190 TEYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 28/227 (12%)
Query: 288 RYLLLMLLGKGGFSEVHKAFD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
RY L +G+G + V A+D L + R K+ + Y + LRE I
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-------EHQTYCQRTLREIKILL 82
Query: 347 ALDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVV 402
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 83 RFRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQIL 140
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLT 461
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH
Sbjct: 141 RGLKYIHSAN--VLHRDLKPSNLLL---NTTCDLKICDFGLARVAD-----PDHDHTGFL 190
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ T WY PE + N + +D+WSVG I + L + F
Sbjct: 191 TEYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 28/227 (12%)
Query: 288 RYLLLMLLGKGGFSEVHKAFD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
RY L +G+G + V A+D L + R K+ + Y + LRE I
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-------EHQTYCQRTLREIKILL 73
Query: 347 ALDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVV 402
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 74 RFRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQIL 131
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLT 461
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH
Sbjct: 132 RGLKYIHSAN--VLHRDLKPSNLLL---NTTCDLKICDFGLARVAD-----PDHDHTGFL 181
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ T WY PE + N + +D+WSVG I + L + F
Sbjct: 182 TEYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 28/227 (12%)
Query: 288 RYLLLMLLGKGGFSEVHKAFD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
RY L +G+G + V A+D L + R K+ + Y + LRE I
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-------EHQTYCQRTLREIKILL 80
Query: 347 ALDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVV 402
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLT 461
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH
Sbjct: 139 RGLKYIHSAN--VLHRDLKPSNLLL---NTTCDLKICDFGLARVAD-----PDHDHTGFL 188
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ T WY PE + N + +D+WSVG I + L + F
Sbjct: 189 TEYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 28/227 (12%)
Query: 288 RYLLLMLLGKGGFSEVHKAFD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
RY L +G+G + V A+D L + R K+ + Y + LRE I
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-------EHQTYCQRTLREIKILL 74
Query: 347 ALDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVV 402
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 75 RFRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQIL 132
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLT 461
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH
Sbjct: 133 RGLKYIHSAN--VLHRDLKPSNLLL---NTTCDLKICDFGLARVAD-----PDHDHTGFL 182
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ T WY PE + N + +D+WSVG I + L + F
Sbjct: 183 TEYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G+G + V A+D + VA K + Y + LRE I
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLR 77
Query: 348 LDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVVS 403
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLTS 462
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH +
Sbjct: 136 GLKYIHSAN--VLHRDLKPSNLLL---NTTXDLKICDFGLARVAD-----PDHDHTGFLT 185
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ T WY PE + N + +D+WSVG I + L + F
Sbjct: 186 EYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G+G + V A+D + VA K + Y + LRE I
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLR 79
Query: 348 LDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVVS 403
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQILR 137
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLTS 462
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH +
Sbjct: 138 GLKYIHSAN--VLHRDLKPSNLLL---NTTCDLKICDFGLARVAD-----PDHDHTGFLT 187
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ T WY PE + N + +D+WSVG I + L + F
Sbjct: 188 EYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 341 EYNIHKALDHPRVVKLYD-VFEIDANSFCTVLEYCDGHDLDFYL----KQHKTIAEREAR 395
E N+ + L HP +V+ YD + + + V+EYC+G DL + K+ + + E
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 396 SIVMQVVSALKYLNEIKP---PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENY 452
++ Q+ ALK + V+H DLKP N+ L +K+ DFGL++++
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ---NVKLGDFGLARIL----- 166
Query: 453 NPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+H GT +Y+ PE N + K D+WS+G + Y+ PF
Sbjct: 167 --NHDTSFAKTFVGTPYYMSPEQM----NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 46/262 (17%)
Query: 292 LMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
+ +LG+G F +V KA + + RY A K K ++K + I L E + +L+H
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIK-----KIRHTEEKLSTI---LSEVMLLASLNHQ 62
Query: 352 RVVKLYDVFEIDAN------------SFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIV 398
VV+ Y + N + +EYC+ L D ++ E +
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK---------VMDE 449
Q++ AL Y++ +IH DLKP NI + E +KI DFGL+K +D
Sbjct: 123 RQILEALSYIHS--QGIIHRDLKPMNIFIDESR---NVKIGDFGLAKNVHRSLDILKLDS 177
Query: 450 ENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFG 509
+N P +LTS GT Y+ E + K+D++S+G+IF++ +Y PF
Sbjct: 178 QNL-PGSSDNLTS-AIGTAMYVATEVL---DGTGHYNEKIDMYSLGIIFFEMIY---PFS 229
Query: 510 HNQSQATILEENTILKATEVQF 531
+ IL++ L++ ++F
Sbjct: 230 TGMERVNILKK---LRSVSIEF 248
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 341 EYNIHKALDHPRVVKLYD-VFEIDANSFCTVLEYCDGHDLDFYL----KQHKTIAEREAR 395
E N+ + L HP +V+ YD + + + V+EYC+G DL + K+ + + E
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 396 SIVMQVVSALKYLNEIKP---PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENY 452
++ Q+ ALK + V+H DLKP N+ L +K+ DFGL++++
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ---NVKLGDFGLARIL----- 166
Query: 453 NPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+H GT +Y+ PE N + K D+WS+G + Y+ PF
Sbjct: 167 --NHDTSFAKAFVGTPYYMSPEQM----NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G+G + V A+D + VA K + Y + LRE I
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLR 77
Query: 348 LDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVVS 403
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLTS 462
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH +
Sbjct: 136 GLKYIHSAN--VLHRDLKPSNLLL---NTTXDLKICDFGLARVAD-----PDHDHTGFLT 185
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ T WY PE + N + +D+WSVG I + L + F
Sbjct: 186 EYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G+G + V A+D + VA K + Y + LRE I
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLR 85
Query: 348 LDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVVS 403
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 86 FRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQILR 143
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLTS 462
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH +
Sbjct: 144 GLKYIHSAN--VLHRDLKPSNLLL---NTTCDLKICDFGLARVAD-----PDHDHTGFLT 193
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ T WY PE + N + +D+WSVG I + L + F
Sbjct: 194 EYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G+G + V A+D + VA K + Y + LRE I
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLR 77
Query: 348 LDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVVS 403
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLTS 462
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH +
Sbjct: 136 GLKYIHSAN--VLHRDLKPSNLLL---NTTCDLKICDFGLARVAD-----PDHDHTGFLT 185
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ T WY PE + N + +D+WSVG I + L + F
Sbjct: 186 EYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 33/233 (14%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV + +R + + L + + ++ ++ L E +I DHP
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF----LSEASIMGQFDHPN 70
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------SAL 405
++ L V + EY + LD +L+++ + R V+Q+V S +
Sbjct: 71 IIHLEGVVT-KCKPVMIITEYMENGSLDAFLRKN------DGRFTVIQLVGMLRGIGSGM 123
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KYL+++ +H DL NIL+ VC K++DFG+S+V++++ P+ T G
Sbjct: 124 KYLSDMS--YVHRDLAARNILVNSNLVC---KVSDFGMSRVLEDD---PEAAYT-TRGGK 174
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 175 IPIRWTAPEAIAY----RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 223
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G+G + V A+D + VA K + Y + LRE I
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLR 77
Query: 348 LDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVVS 403
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLTS 462
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH +
Sbjct: 136 GLKYIHSAN--VLHRDLKPSNLLL---NTTCDLKICDFGLARVAD-----PDHDHTGFLT 185
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ T WY PE + N + +D+WSVG I + L + F
Sbjct: 186 EYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 28/227 (12%)
Query: 288 RYLLLMLLGKGGFSEVHKAFD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
RY L +G+G + V A+D L + R K+ + Y + LRE I
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-------EHQTYCQRTLREIKILL 80
Query: 347 ALDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVV 402
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLT 461
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH
Sbjct: 139 RGLKYIHSAN--VLHRDLKPSNLLL---NTTCDLKICDFGLARVAD-----PDHDHTGFL 188
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ T WY PE + N + +D+WSVG I + L + F
Sbjct: 189 XEXVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G+G + V A+D + VA K + Y + LRE I
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLR 97
Query: 348 LDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVVS 403
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 98 FRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQILR 155
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLTS 462
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH +
Sbjct: 156 GLKYIHSAN--VLHRDLKPSNLLL---NTTCDLKICDFGLARVAD-----PDHDHTGFLT 205
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ T WY PE + N + +D+WSVG I + L + F
Sbjct: 206 EYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 28/227 (12%)
Query: 288 RYLLLMLLGKGGFSEVHKAFD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
RY L +G+G + V A+D L + R K+ + Y + LRE I
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-------EHQTYCQRTLREIKILL 81
Query: 347 ALDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVV 402
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 82 RFRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKTQHLSNDHICYFLYQIL 139
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLT 461
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH
Sbjct: 140 RGLKYIHSAN--VLHRDLKPSNLLL---NTTCDLKICDFGLARVAD-----PDHDHTGFL 189
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ T WY PE + N + +D+WSVG I + L + F
Sbjct: 190 XEXVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 19/227 (8%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV L +R + + L + E ++ ++ L E +I DHP
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDF----LSEASIMGQFDHPN 69
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEI 411
V+ L V + + E+ + LD +L+Q+ + ++ + + +KYL ++
Sbjct: 70 VIHLEGVVT-KSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM 128
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
+H L NIL+ VC K++DFGLS+ ++++ +P + L G +
Sbjct: 129 N--YVHRALAARNILVNSNLVC---KVSDFGLSRFLEDDTSDPTYTSALG--GKIPIRWT 181
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
PE K +S DVWS G++ ++ + YG++P+ +Q I
Sbjct: 182 APEAI----QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI 224
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 28/227 (12%)
Query: 288 RYLLLMLLGKGGFSEVHKAFD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
RY L +G+G + V A+D L + R K+ + Y + LRE I
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-------EHQTYCQRTLREIKILL 80
Query: 347 ALDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVV 402
H ++ + D+ I+ +++ D + D Y L + + ++ + Q++
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQ--DLMETDLYKLLKCQHLSNDHICYFLYQIL 138
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG-MDLT 461
LKY++ V+H DLKP N+LL N ++KI DFGL++V D PDH
Sbjct: 139 RGLKYIHSAN--VLHRDLKPSNLLL---NTTCDLKICDFGLARVAD-----PDHDHTGFL 188
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ T WY PE + N + +D+WSVG I + L + F
Sbjct: 189 TEYVATRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 32/231 (13%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G F EV KA K + VA L K E++K + ALRE I + L H VV
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVA-----LKKVLMENEKEGFPITALREIKILQLLKHENVV 79
Query: 355 KLYDVFEIDAN-------SFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVMQVVSALK 406
L ++ A+ S V ++C+ HDL L E + ++ +++ L
Sbjct: 80 NLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 138
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMD-EENYNPDHGMDLTSQGA 465
Y++ K ++H D+K N+L+T G +K+ DFGL++ +N P+ +
Sbjct: 139 YIHRNK--ILHRDMKAANVLITRD---GVLKLADFGLARAFSLAKNSQPNRYXNRVV--- 190
Query: 466 GTYWYLPPECFVVGKN--PPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQ 514
T WY PPE + ++ PP +D+W G I + ++ + P ++
Sbjct: 191 -TLWYRPPELLLGERDYGPP-----IDLWGAGCIMAE-MWTRSPIMQGNTE 234
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 32/238 (13%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
+Y L +G+G F EV KA K + VA L K E++K + ALRE I +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVA-----LKKVLMENEKEGFPITALREIKILQL 73
Query: 348 LDHPRVVKLYDVFEIDAN-------SFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVM 399
L H VV L ++ A+ S V ++C+ HDL L E + ++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMD-EENYNPDHGM 458
+++ L Y++ K ++H D+K N+L+T G +K+ DFGL++ +N P+
Sbjct: 133 MLLNGLYYIHRNK--ILHRDMKAANVLITRD---GVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 459 DLTSQGAGTYWYLPPECFVVGKN--PPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQ 514
+ T WY PPE + ++ PP +D+W G I + ++ + P ++
Sbjct: 188 NRVV----TLWYRPPELLLGERDYGPP-----IDLWGAGCIMAE-MWTRSPIMQGNTE 235
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 32/238 (13%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
+Y L +G+G F EV KA K + VA L K E++K + ALRE I +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVA-----LKKVLMENEKEGFPITALREIKILQL 73
Query: 348 LDHPRVVKLYDVFEIDAN-------SFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVM 399
L H VV L ++ A+ S V ++C+ HDL L E + ++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMD-EENYNPDHGM 458
+++ L Y++ K ++H D+K N+L+T G +K+ DFGL++ +N P+
Sbjct: 133 MLLNGLYYIHRNK--ILHRDMKAANVLITRD---GVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 459 DLTSQGAGTYWYLPPECFVVGKN--PPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQ 514
+ T WY PPE + ++ PP +D+W G I + ++ + P ++
Sbjct: 188 NRVV----TLWYRPPELLLGERDYGPP-----IDLWGAGCIMAE-MWTRSPIMQGNTE 235
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 65
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVMQVVSALKYLNEIKP 413
KL DV + N V E+ DF T I +S + Q++ L + + +
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 123
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY P
Sbjct: 124 -VLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRAP 172
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
E + K S+ VD+WS+G IF + + + F
Sbjct: 173 EILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 31/238 (13%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA--LREYN 343
+ RY + +G G + V+KA D +VA K ++ + +E + ++ LR
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV-PNGEEGLPISTVREVALLRRL- 60
Query: 344 IHKALDHPRVVKLYDVFEIDANS----FCTVLEYCDGHDLDFYLKQHKT--IAEREARSI 397
+A +HP VV+L DV V E+ D DL YL + + + +
Sbjct: 61 --EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDL 117
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ Q + L +L+ ++H DLKP NIL+T G G +K+ DFGL+++ +
Sbjct: 118 MRQFLRGLDFLHANC--IVHRDLKPENILVTSG---GTVKLADFGLARIY-------SYQ 165
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
M L T WY PE + ++ VD+WSVG IF + ++ +KP S+A
Sbjct: 166 MALFPV-VVTLWYRAPEVLLQS----TYATPVDMWSVGCIFAE-MFRRKPLFCGNSEA 217
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 20/171 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARSI 397
+RE + + P +V Y F D S C +E+ DG LD LK+ K I E +
Sbjct: 62 IRELQVLHECNSPYIVGFYGAFYSDGEISIC--MEHMDGGSLDQVLKEAKRIPEEILGKV 119
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ V+ L YL E K ++H D+KP NIL+ N GEIK+ DFG+S + +
Sbjct: 120 SIAVLRGLAYLRE-KHQIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLID-------- 167
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ + GT Y+ PE S + D+WS+G+ + G+ P
Sbjct: 168 -SMANSFVGTRSYMAPERL----QGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 46/262 (17%)
Query: 292 LMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
+ +LG+G F +V KA + + RY A K K ++K + I L E + +L+H
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIK-----KIRHTEEKLSTI---LSEVMLLASLNHQ 62
Query: 352 RVVKLYDVFEIDAN------------SFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIV 398
VV+ Y + N + +EYC+ L D ++ E +
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK---------VMDE 449
Q++ AL Y++ +IH DLKP NI + E +KI DFGL+K +D
Sbjct: 123 RQILEALSYIHS--QGIIHRDLKPMNIFIDESR---NVKIGDFGLAKNVHRSLDILKLDS 177
Query: 450 ENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFG 509
+N P +LTS GT Y+ E + K+D++S+G+IF++ +Y PF
Sbjct: 178 QNL-PGSSDNLTS-AIGTAMYVATEVL---DGTGHYNEKIDMYSLGIIFFEMIY---PFS 229
Query: 510 HNQSQATILEENTILKATEVQF 531
+ IL++ L++ ++F
Sbjct: 230 TGMERVNILKK---LRSVSIEF 248
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 27/298 (9%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIK-HALREYNIHKALDHPR 352
+LG+G + V +L + A K+ + K+ +I+ RE + R
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIE--------KQPGHIRSRVFREVEMLYQCQGHR 71
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIK 412
V F + + F V E G + ++ + + E EA +V V SAL +L+
Sbjct: 72 NVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLH--N 129
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGL-SKVMDEENYNPDHGMDLTSQGAGTYWYL 471
+ H DLKP NIL N +KI DFGL S + + +P +L + G+ Y+
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTP-CGSAEYM 188
Query: 472 PPECFVVGKNPPKISSK-VDVWSVGVIFYQCLYGKKPF--------GHNQSQATILEENT 522
PE I K D+WS+GVI Y L G PF G ++ +A +N
Sbjct: 189 APEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM 248
Query: 523 ILKATE---VQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
+ ++ + +F +K +S AK I L + R+ + +H ++Q P++
Sbjct: 249 LFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPEN 306
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
HP ++ L DV++ D V E G +L + + K +EREA +++ + ++YL+
Sbjct: 75 HPNIITLKDVYD-DGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGE-IKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
V+H DLKP NIL + + E I+I DFG +K + EN G+
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN-----GL---------- 176
Query: 469 WYLPPECFVVGKNPPKI------SSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENT 522
L C+ P++ + D+WS+GV+ Y L G PF + E
Sbjct: 177 --LXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDT---PEEI 231
Query: 523 ILKATEVQFANKP----TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL----QPPVPK 574
+ + +F+ +VS+ AK + L R+ + RH ++ Q P +
Sbjct: 232 LARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWDQLPQYQ 291
Query: 575 HGRQSA 580
RQ A
Sbjct: 292 LNRQDA 297
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 68
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 69 KLLDVIHTE-NKLYLVFEFLH-QDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 127 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRA 174
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 175 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 142/329 (43%), Gaps = 44/329 (13%)
Query: 279 FNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA 338
N H ++D + + ++G+GGF EV+ + A K L+K + K+ + A
Sbjct: 181 LNIHLTMND-FSVHRIIGRGGFGEVYGCRKADTGKMYAMKC--LDKKRIKMKQGETL--A 235
Query: 339 LRE---YNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 394
L E ++ D P +V + F D SF +L+ +G DL ++L QH +E +
Sbjct: 236 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF--ILDLMNGGDLHYHLSQHGVFSEADM 293
Query: 395 RSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNP 454
R +++ L++++ V++ DLKP NILL E G ++I+D GL+
Sbjct: 294 RFYAAEIILGLEHMH--NRFVVYRDLKPANILLDEH---GHVRISDLGLA---------C 339
Query: 455 DHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQS 513
D GT+ Y+ PE G S D +S+G + ++ L G PF H
Sbjct: 340 DFSKKKPHASVGTHGYMAPEVLQKG---VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 396
Query: 514 QATILEENTILKATEVQFANKPTVSNEAKGFIR-------SCLAYRKED--------RID 558
++ T+ A E+ + P + + +G ++ CL ++ +D
Sbjct: 397 DKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 456
Query: 559 VISLARHDYLQPPVPKHGRQSASSSAPVG 587
+ Y P +P G +A+ + +G
Sbjct: 457 WQMVFLQKYPPPLIPPRGEVNAADAFDIG 485
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 142/329 (43%), Gaps = 44/329 (13%)
Query: 279 FNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA 338
N H ++D + + ++G+GGF EV+ + A K L+K + K+ + A
Sbjct: 182 LNIHLTMND-FSVHRIIGRGGFGEVYGCRKADTGKMYAMKC--LDKKRIKMKQGETL--A 236
Query: 339 LRE---YNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 394
L E ++ D P +V + F D SF +L+ +G DL ++L QH +E +
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF--ILDLMNGGDLHYHLSQHGVFSEADM 294
Query: 395 RSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNP 454
R +++ L++++ V++ DLKP NILL E G ++I+D GL+
Sbjct: 295 RFYAAEIILGLEHMH--NRFVVYRDLKPANILLDEH---GHVRISDLGLA---------C 340
Query: 455 DHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQS 513
D GT+ Y+ PE G S D +S+G + ++ L G PF H
Sbjct: 341 DFSKKKPHASVGTHGYMAPEVLQKG---VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
Query: 514 QATILEENTILKATEVQFANKPTVSNEAKGFIR-------SCLAYRKED--------RID 558
++ T+ A E+ + P + + +G ++ CL ++ +D
Sbjct: 398 DKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457
Query: 559 VISLARHDYLQPPVPKHGRQSASSSAPVG 587
+ Y P +P G +A+ + +G
Sbjct: 458 WQMVFLQKYPPPLIPPRGEVNAADAFDIG 486
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 72
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 73 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 131 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLWYRA 178
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 179 PEILLGXKY---YSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 69
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 70 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 128 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLWYRA 175
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 176 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 26/281 (9%)
Query: 279 FNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA 338
PV + + +LGKGGF EV + ACK + + K +A A
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEA----MA 231
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSI- 397
L E I + ++ VV L +E ++ C VL +G DL F++ EAR++
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETK-DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 398 -VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
++ L+ L+ + +++ DLKP NILL + G I+I+D GL+ + E
Sbjct: 291 YAAEICCGLEDLHRER--IVYRDLKPENILLDDH---GHIRISDLGLAVHVPE------- 338
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQAT 516
G + + GT Y+ PE V KN + + D W++G + Y+ + G+ PF + +
Sbjct: 339 GQTIKGR-VGTVGYMAPE---VVKNE-RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK 393
Query: 517 ILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRI 557
E ++K +++ + S +A+ L +R+
Sbjct: 394 REEVERLVKEVPEEYSER--FSPQARSLCSQLLCKDPAERL 432
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 65
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 124 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLWYRA 171
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 172 PEILLGXKY---YSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 142/329 (43%), Gaps = 44/329 (13%)
Query: 279 FNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA 338
N H ++D + + ++G+GGF EV+ + A K L+K + K+ + A
Sbjct: 182 LNIHLTMND-FSVHRIIGRGGFGEVYGCRKADTGKMYAMKC--LDKKRIKMKQGETL--A 236
Query: 339 LRE---YNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 394
L E ++ D P +V + F D SF +L+ +G DL ++L QH +E +
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF--ILDLMNGGDLHYHLSQHGVFSEADM 294
Query: 395 RSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNP 454
R +++ L++++ V++ DLKP NILL E G ++I+D GL+
Sbjct: 295 RFYAAEIILGLEHMH--NRFVVYRDLKPANILLDEH---GHVRISDLGLA---------C 340
Query: 455 DHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQS 513
D GT+ Y+ PE G S D +S+G + ++ L G PF H
Sbjct: 341 DFSKKKPHASVGTHGYMAPEVLQKG---VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
Query: 514 QATILEENTILKATEVQFANKPTVSNEAKGFIR-------SCLAYRKED--------RID 558
++ T+ A E+ + P + + +G ++ CL ++ +D
Sbjct: 398 DKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457
Query: 559 VISLARHDYLQPPVPKHGRQSASSSAPVG 587
+ Y P +P G +A+ + +G
Sbjct: 458 WQMVFLQKYPPPLIPPRGEVNAADAFDIG 486
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 142/329 (43%), Gaps = 44/329 (13%)
Query: 279 FNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA 338
N H ++D + + ++G+GGF EV+ + A K L+K + K+ + A
Sbjct: 182 LNIHLTMND-FSVHRIIGRGGFGEVYGCRKADTGKMYAMKC--LDKKRIKMKQGETL--A 236
Query: 339 LRE---YNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 394
L E ++ D P +V + F D SF +L+ +G DL ++L QH +E +
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF--ILDLMNGGDLHYHLSQHGVFSEADM 294
Query: 395 RSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNP 454
R +++ L++++ V++ DLKP NILL E G ++I+D GL+
Sbjct: 295 RFYAAEIILGLEHMH--NRFVVYRDLKPANILLDEH---GHVRISDLGLA---------C 340
Query: 455 DHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQS 513
D GT+ Y+ PE G S D +S+G + ++ L G PF H
Sbjct: 341 DFSKKKPHASVGTHGYMAPEVLQKG---VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
Query: 514 QATILEENTILKATEVQFANKPTVSNEAKGFIR-------SCLAYRKED--------RID 558
++ T+ A E+ + P + + +G ++ CL ++ +D
Sbjct: 398 DKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457
Query: 559 VISLARHDYLQPPVPKHGRQSASSSAPVG 587
+ Y P +P G +A+ + +G
Sbjct: 458 WQMVFLQKYPPPLIPPRGEVNAADAFDIG 486
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 123/300 (41%), Gaps = 56/300 (18%)
Query: 295 LGKGGFSEVHKAFD---LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
+G+G F V +A L + + V L ++ D +A++ RE + D+P
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF----QREAALMAEFDNP 110
Query: 352 RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ----------HKTIAER--------- 392
+VKL V + C + EY DL+ +L+ H ++ R
Sbjct: 111 NIVKLLGVCAV-GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 393 -----EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM 447
E I QV + + YL+E K +H DL N L+ E V +KI DFGLS+ +
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSERK--FVHRDLATRNCLVGENMV---VKIADFGLSRNI 224
Query: 448 DEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKK 506
+Y G D A ++PPE + +++ DVW+ GV+ ++ YG +
Sbjct: 225 YSADYYKADGND-----AIPIRWMPPESIFYN----RYTTESDVWAYGVVLWEIFSYGLQ 275
Query: 507 PFGHNQSQATI--LEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLAR 564
P+ + I + + IL E N P E +R C + DR S+ R
Sbjct: 276 PYYGMAHEEVIYYVRDGNILACPE----NCPL---ELYNLMRLCWSKLPADRPSFCSIHR 328
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 66
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 67 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 125 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLWYRA 172
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 173 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 68
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 69 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 127 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRA 174
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 175 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 72
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 73 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 131 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVV-------TLWYRA 178
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 179 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 67
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 68 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 126 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRA 173
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 174 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 122/285 (42%), Gaps = 40/285 (14%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G V+ A D+ + VA + L + K++ N I +RE +P +V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI-LVMRENK------NPNIV 80
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
D + + + V+EY G L + + + E + ++ + + AL++L+ +
Sbjct: 81 NYLDSYLV-GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ-- 136
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPE 474
VIH D+K NILL + G +K+TDFG + E S+ GT +++ PE
Sbjct: 137 VIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSK-------RSEMVGTPYWMAPE 186
Query: 475 CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANK 534
PK VD+WS+G++ + + G+ P+ L EN + +
Sbjct: 187 VVTRKAYGPK----VDIWSLGIMAIEMIEGEPPY---------LNENPLRALYLIATNGT 233
Query: 535 PTVSNEAK------GFIRSCLAYRKEDRIDVISLARHDYLQPPVP 573
P + N K F+ CL E R L +H +L+ P
Sbjct: 234 PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 68
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 69 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 127 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRA 174
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 175 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 67
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 68 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 126 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRA 173
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 174 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 65
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 124 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLWYRA 171
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 172 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 64
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 65 KLLDVIHTE-NKLYLVFEHVH-QDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 123 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLWYRA 170
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 171 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 66
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 67 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 125 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRA 172
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 173 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 65
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR 123
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 124 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLWYRA 171
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 172 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 69
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 70 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 128 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVV-------TLWYRA 175
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 176 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 67
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 68 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 126 --VLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRA 173
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 174 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 66
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 67 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 125 --VLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRA 172
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 173 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 65
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 124 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLWYRA 171
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 172 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 64
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 65 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 123 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLWYRA 170
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 171 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARSI 397
+RE + + P +V Y F D S C +E+ DG LD LK+ I E+ +
Sbjct: 114 IRELQVLHECNSPYIVGFYGAFYSDGEISIC--MEHMDGGSLDQVLKKAGRIPEQILGKV 171
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ V+ L YL E K ++H D+KP NIL+ N GEIK+ DFG+S + + N
Sbjct: 172 SIAVIKGLTYLRE-KHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---- 223
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
GT Y+ PE S + D+WS+G+ + G+ P
Sbjct: 224 -----SFVGTRSYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 68
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 69 KLLDVIHTE-NKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 127 --VLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRA 174
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 175 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 65
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 124 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRA 171
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 172 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 65
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 124 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRA 171
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 172 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 26/281 (9%)
Query: 279 FNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA 338
PV + + +LGKGGF EV + ACK + + K +A A
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEA----MA 231
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSI- 397
L E I + ++ VV L +E ++ C VL +G DL F++ EAR++
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETK-DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 398 -VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
++ L+ L+ + +++ DLKP NILL + G I+I+D GL+ + E
Sbjct: 291 YAAEICCGLEDLHRER--IVYRDLKPENILLDDH---GHIRISDLGLAVHVPE------- 338
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQAT 516
G + + GT Y+ PE V KN + + D W++G + Y+ + G+ PF + +
Sbjct: 339 GQTIKGR-VGTVGYMAPE---VVKNE-RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK 393
Query: 517 ILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRI 557
E ++K +++ + S +A+ L +R+
Sbjct: 394 REEVERLVKEVPEEYSER--FSPQARSLCSQLLCKDPAERL 432
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 64
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 65 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 123 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLWYRA 170
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 171 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 64
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 65 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 123 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRA 170
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 171 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 66
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 67 KLLDVIHTE-NKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 125 --VLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRA 172
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 173 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 34/219 (15%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G+G F V KA + R + Q+ + ++KA ++ LR+ + ++HP +
Sbjct: 16 VVGRGAFGVVCKA----KWRAKDVAIKQIESE--SERKAFIVE--LRQLS---RVNHPNI 64
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI---AEREARSIVMQVVSALKYLNE 410
VKLY N C V+EY +G L L + + A S +Q + YL+
Sbjct: 65 VKLYGAC---LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 121
Query: 411 IKP-PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
++P +IH DLKP N+LL G +KI DFG + D +T+ W
Sbjct: 122 MQPKALIHRDLKPPNLLLVAGGTV--LKICDFGTAC---------DIQTHMTNNKGSAAW 170
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ PE F G N S K DV+S G+I ++ + +KPF
Sbjct: 171 -MAPEVFE-GSN---YSEKCDVFSWGIILWEVITRRKPF 204
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 121/285 (42%), Gaps = 40/285 (14%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G V+ A D+ + VA + L + K++ N I +RE +P +V
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI-LVMRENK------NPNIV 81
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
D + + + V+EY G L + + + E + ++ + + AL++L+ +
Sbjct: 82 NYLDSYLV-GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ-- 137
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPE 474
VIH D+K NILL + G +K+TDFG + E S GT +++ PE
Sbjct: 138 VIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSK-------RSXMVGTPYWMAPE 187
Query: 475 CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANK 534
PK VD+WS+G++ + + G+ P+ L EN + +
Sbjct: 188 VVTRKAYGPK----VDIWSLGIMAIEMIEGEPPY---------LNENPLRALYLIATNGT 234
Query: 535 PTVSNEAK------GFIRSCLAYRKEDRIDVISLARHDYLQPPVP 573
P + N K F+ CL E R L +H +L+ P
Sbjct: 235 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKP 279
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 65
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 124 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRA 171
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 172 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 20/171 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARSI 397
+RE + + P +V Y F D S C +E+ DG LD LK+ I E+ +
Sbjct: 79 IRELQVLHECNSPYIVGFYGAFYSDGEISIC--MEHMDGGSLDQVLKKAGRIPEQILGKV 136
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ V+ L YL E K ++H D+KP NIL+ N GEIK+ DFG+S + +
Sbjct: 137 SIAVIKGLTYLRE-KHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLID-------- 184
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ + GT Y+ PE S + D+WS+G+ + G+ P
Sbjct: 185 -SMANSFVGTRSYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 121/285 (42%), Gaps = 40/285 (14%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G V+ A D+ + VA + L + K++ N I +RE +P +V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI-LVMRENK------NPNIV 80
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
D + + + V+EY G L + + + E + ++ + + AL++L+ +
Sbjct: 81 NYLDSYLV-GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ-- 136
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPE 474
VIH D+K NILL + G +K+TDFG + E S GT +++ PE
Sbjct: 137 VIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSK-------RSXMVGTPYWMAPE 186
Query: 475 CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANK 534
PK VD+WS+G++ + + G+ P+ L EN + +
Sbjct: 187 VVTRKAYGPK----VDIWSLGIMAIEMIEGEPPY---------LNENPLRALYLIATNGT 233
Query: 535 PTVSNEAK------GFIRSCLAYRKEDRIDVISLARHDYLQPPVP 573
P + N K F+ CL E R L +H +L+ P
Sbjct: 234 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP 278
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 64
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 65 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 123 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRA 170
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 171 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 65
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 124 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRA 171
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 172 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + VA K +L+ + A+RE ++ K L+HP +V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----TEGVPSTAIREISLLKELNHPNIV 66
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 67 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 125 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEV-------VTLWYRA 172
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 173 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 101/237 (42%), Gaps = 31/237 (13%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
+Y L+ LGKG + V K+ D + VA K K + + + + RE I
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVK-----KIFDAFQNSTDAQRTFREIMILTE 64
Query: 348 LD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE-REARSIVMQVVSAL 405
L H +V L +V D + V D + D + I E + +V Q++ +
Sbjct: 65 LSGHENIVNLLNVLRADNDR--DVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVI 122
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKV--------------MDEEN 451
KYL+ ++H D+KP NILL N +K+ DFGLS+ ++E
Sbjct: 123 KYLHS--GGLLHRDMKPSNILL---NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177
Query: 452 YNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
N D + + T WY PE + K + +D+WS+G I + L GK F
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILL---GSTKYTKGIDMWSLGCILGEILCGKPIF 231
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 34/219 (15%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G+G F V KA + R + Q+ + ++KA ++ LR+ + ++HP +
Sbjct: 15 VVGRGAFGVVCKA----KWRAKDVAIKQIESE--SERKAFIVE--LRQLS---RVNHPNI 63
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI---AEREARSIVMQVVSALKYLNE 410
VKLY N C V+EY +G L L + + A S +Q + YL+
Sbjct: 64 VKLYGAC---LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 120
Query: 411 IKP-PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
++P +IH DLKP N+LL G +KI DFG + D +T+ W
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTV--LKICDFGTAC---------DIQTHMTNNKGSAAW 169
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ PE F G N S K DV+S G+I ++ + +KPF
Sbjct: 170 -MAPEVFE-GSN---YSEKCDVFSWGIILWEVITRRKPF 203
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 121/285 (42%), Gaps = 40/285 (14%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G V+ A D+ + VA + L + K++ N I +RE +P +V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI-LVMRENK------NPNIV 80
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
D + + + V+EY G L + + + E + ++ + + AL++L+ +
Sbjct: 81 NYLDSYLV-GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ-- 136
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPE 474
VIH D+K NILL + G +K+TDFG + E S GT +++ PE
Sbjct: 137 VIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSK-------RSTMVGTPYWMAPE 186
Query: 475 CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANK 534
PK VD+WS+G++ + + G+ P+ L EN + +
Sbjct: 187 VVTRKAYGPK----VDIWSLGIMAIEMIEGEPPY---------LNENPLRALYLIATNGT 233
Query: 535 PTVSNEAK------GFIRSCLAYRKEDRIDVISLARHDYLQPPVP 573
P + N K F+ CL E R L +H +L+ P
Sbjct: 234 PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 119/263 (45%), Gaps = 45/263 (17%)
Query: 288 RYLL----LMLLGKGGFSEVHKAFD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREY 342
RYL + LG+GGF V +A + + + Y ++ N++ +K +RE
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREK-------VMREV 54
Query: 343 NIHKALDHPRVVKLYDVFEIDANS------------FCTVLEYCDGHDLDFYLKQHKTIA 390
L+HP +V+ ++ + ++ N+ ++ C +L ++ TI
Sbjct: 55 KALAKLEHPGIVRYFNAW-LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIE 113
Query: 391 ERE---ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM 447
ERE I +Q+ A+++L+ ++H DLKP NI T +V +K+ DFGL M
Sbjct: 114 ERERSVCLHIFLQIAEAVEFLH--SKGLMHRDLKPSNIFFTMDDV---VKVGDFGLVTAM 168
Query: 448 DEEN-----YNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
D++ P + GT Y+ PE + G + S KVD++S+G+I ++ L
Sbjct: 169 DQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQ-IHGNS---YSHKVDIFSLGLILFELL 224
Query: 503 YGKKPFGHNQSQATILEENTILK 525
Y PF + L + LK
Sbjct: 225 Y---PFSTQMERVRTLTDVRNLK 244
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 338 ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--------- 388
A RE + + L HP V+ L VF A+ +L HDL +K H+
Sbjct: 65 ACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQ 124
Query: 389 IAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNIL-LTEGNVCGEIKITDFGLSKVM 447
+ +S++ Q++ + YL+ V+H DLKP NIL + EG G +KI D G +++
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
Query: 448 DEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
+ +P + T+WY PE + ++ + +D+W++G IF + L +
Sbjct: 183 N----SPLKPLADLDPVVVTFWYRAPELLLGARH---YTKAIDIWAIGCIFAELLTSEPI 235
Query: 508 F 508
F
Sbjct: 236 F 236
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 114/244 (46%), Gaps = 51/244 (20%)
Query: 295 LGKGGFSEVHKA--FDLKEQR-YVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
LG+G F +V KA F LK + Y V L KE+ + ++ L E+N+ K ++HP
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKML----KENASPSELRDLLSEFNVLKQVNHP 86
Query: 352 RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA-------------------ER 392
V+KLY D ++EY L +L++ + + ER
Sbjct: 87 HVIKLYGACSQDG-PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 393 -----EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK-V 446
+ S Q+ ++YL E+K ++H DL NIL+ EG ++KI+DFGLS+ V
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNILVAEGR---KMKISDFGLSRDV 200
Query: 447 MDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKI-SSKVDVWSVGVIFYQCL-YG 504
+E++Y SQG +P + + I +++ DVWS GV+ ++ + G
Sbjct: 201 YEEDSYVK------RSQGR-----IPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 505 KKPF 508
P+
Sbjct: 250 GNPY 253
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
+ D Y ++ +G G + V A +R + + + K K LRE I
Sbjct: 52 VGDEYEIIETIGNGAYGVVSSA-----RRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKI 106
Query: 345 HKALDHPRVVKLYDVFE--IDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQ 400
K H ++ + D+ + F +V D + D + H + + R + Q
Sbjct: 107 LKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQ 166
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
++ LKY++ + VIH DLKP N+L+ E C E+KI DFG+++ + +P
Sbjct: 167 LLRGLKYMHSAQ--VIHRDLKPSNLLVNEN--C-ELKIGDFGMARGL---CTSPAEHQYF 218
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ T WY PE + + + + +D+WSVG IF + L ++ F
Sbjct: 219 MTEYVATRWYRAPELML---SLHEYTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 112/243 (46%), Gaps = 49/243 (20%)
Query: 295 LGKGGFSEVHKA--FDLKEQR-YVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
LG+G F +V KA F LK + Y V L KE+ + ++ L E+N+ K ++HP
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKML----KENASPSELRDLLSEFNVLKQVNHP 86
Query: 352 RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA-------------------ER 392
V+KLY D ++EY L +L++ + + ER
Sbjct: 87 HVIKLYGACSQDG-PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 393 -----EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM 447
+ S Q+ ++YL E+K ++H DL NIL+ EG ++KI+DFGLS+ +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNILVAEGR---KMKISDFGLSRDV 200
Query: 448 DEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKI-SSKVDVWSVGVIFYQCL-YGK 505
EE+ SQG +P + + I +++ DVWS GV+ ++ + G
Sbjct: 201 YEEDSXVKR-----SQGR-----IPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 250
Query: 506 KPF 508
P+
Sbjct: 251 NPY 253
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARSI 397
+RE + + P +V Y F D S C +E+ DG LD LK+ I E+ +
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISIC--MEHMDGGSLDQVLKKAGRIPEQILGKV 109
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ V+ L YL E K ++H D+KP NIL+ N GEIK+ DFG+S + + N
Sbjct: 110 SIAVIKGLTYLRE-KHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---- 161
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
GT Y+ PE S + D+WS+G+ + G+ P
Sbjct: 162 -----SFVGTRSYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
+ D Y ++ +G G + V A +R + + + K K LRE I
Sbjct: 53 VGDEYEIIETIGNGAYGVVSSA-----RRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKI 107
Query: 345 HKALDHPRVVKLYDVFE--IDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQ 400
K H ++ + D+ + F +V D + D + H + + R + Q
Sbjct: 108 LKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQ 167
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
++ LKY++ + VIH DLKP N+L+ E C E+KI DFG+++ + +P
Sbjct: 168 LLRGLKYMHSAQ--VIHRDLKPSNLLVNEN--C-ELKIGDFGMARGL---CTSPAEHQYF 219
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++ T WY PE + + + +D+WSVG IF + L ++ F
Sbjct: 220 MTEYVATRWYRAPELMLSLH---EYTQAIDLWSVGCIFGEMLARRQLF 264
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARSI 397
+RE + + P +V Y F D S C +E+ DG LD LK+ I E+ +
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISIC--MEHMDGGSLDQVLKKAGRIPEQILGKV 109
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ V+ L YL E K ++H D+KP NIL+ N GEIK+ DFG+S + + N
Sbjct: 110 SIAVIKGLTYLRE-KHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---- 161
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
GT Y+ PE S + D+WS+G+ + G+ P
Sbjct: 162 -----SFVGTRSYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + + +V L K + + A+RE ++ K L+HP +V
Sbjct: 11 IGEGTYGVVYKA-----RNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 124 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLWYRA 171
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 172 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G + V+KA + + +V L K + + A+RE ++ K L+HP +V
Sbjct: 10 IGEGTYGVVYKA-----RNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIV 64
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSALKYLNEIK 412
KL DV + N V E+ DL ++ I +S + Q++ L + + +
Sbjct: 65 KLLDVIHTE-NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
V+H DLKP N+L+ N G IK+ DFGL++ H + T WY
Sbjct: 123 --VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLWYRA 170
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE + K S+ VD+WS+G IF + + + F
Sbjct: 171 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLK-EQRYVACKVHQLNKDWKEDKKANYIKHAL 339
++ + +R L +G+G F +VH+ + E +A + + + +++ AL
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
+ DHP +VKL V I N ++E C +L +L+ K + S+++
Sbjct: 444 ----TMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRK--FSLDLASLIL 495
Query: 400 ---QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
Q+ +AL YL + +H D+ N+L++ N C +K+ DFGLS+ M++ Y
Sbjct: 496 YAYQLSTALAYLESKR--FVHRDIAARNVLVS-SNDC--VKLGDFGLSRYMEDSTYYK-- 548
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
S+G ++ PE N + +S DVW GV ++ L +G KPF
Sbjct: 549 ----ASKGKLPIKWMAPESI----NFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 123/290 (42%), Gaps = 29/290 (10%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQ-RYVACKVHQLNKDWKEDKKANYIKHALREYN 343
L +YL+ LLG+G + +V + D + R + + + +AN K E
Sbjct: 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKK----EIQ 58
Query: 344 IHKALDHPRVVKLYDV-FEIDANSFCTVLEYC-DGHDLDFYLKQHKTIAEREARSIVMQV 401
+ + L H V++L DV + + V+EYC G K +A Q+
Sbjct: 59 LLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQL 118
Query: 402 VSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLT 461
+ L+YL+ ++H D+KPGN+LLT G G +KI+ G++ E +P D
Sbjct: 119 IDGLEYLHSQG--IVHKDIKPGNLLLTTG---GTLKISALGVA-----EALHPFAADDTC 168
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISS-KVDVWSVGVIFYQCLYGKKPF-GHNQSQATILE 519
G+ + PPE + S KVD+WS GV Y G PF G N + L
Sbjct: 169 RTSQGSPAFQPPE---IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK---LF 222
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
EN + + P +S+ KG L Y R + + +H + +
Sbjct: 223 ENIGKGSYAIPGDCGPPLSDLLKGM----LEYEPAKRFSIRQIRQHSWFR 268
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 107/254 (42%), Gaps = 29/254 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G G F VH+A VA K+ ++D A + LRE I K L HP +V
Sbjct: 45 IGAGSFGTVHRA--EWHGSDVAVKILM-----EQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA-----EREARSIVMQVVSALKYLN 409
N V EY L Y HK+ A ER S+ V + YL+
Sbjct: 98 LFMGAVTQPPN-LSIVTEYLSRGSL--YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
PP++H DLK N+L+ + +K+ DFGLS++ + AGT
Sbjct: 155 NRNPPIVHRDLKSPNLLVDKKYT---VKVCDFGLSRLKASXFLX-------SKXAAGTPE 204
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEV 529
++ PE V ++ P + K DV+S GVI ++ ++P+G+ + K E+
Sbjct: 205 WMAPE---VLRDEPS-NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEI 260
Query: 530 QFANKPTVSNEAKG 543
P V+ +G
Sbjct: 261 PRNLNPQVAAIIEG 274
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 20/171 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARSI 397
+RE + + P +V Y F D S C +E+ DG LD LK+ I E+ +
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISIC--MEHMDGGSLDQVLKKAGRIPEQILGKV 109
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ V+ L YL E K ++H D+KP NIL+ N GEIK+ DFG+S + +
Sbjct: 110 SIAVIKGLTYLRE-KHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLID-------- 157
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ + GT Y+ PE S + D+WS+G+ + G+ P
Sbjct: 158 -SMANSFVGTRSYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 20/171 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARSI 397
+RE + + P +V Y F D S C +E+ DG LD LK+ I E+ +
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISIC--MEHMDGGSLDQVLKKAGRIPEQILGKV 109
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ V+ L YL E K ++H D+KP NIL+ N GEIK+ DFG+S + +
Sbjct: 110 SIAVIKGLTYLRE-KHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLID-------- 157
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ + GT Y+ PE S + D+WS+G+ + G+ P
Sbjct: 158 -SMANSFVGTRSYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLK-EQRYVACKVHQLNKDWKEDKKANYIKHAL 339
++ + +R L +G+G F +VH+ + E +A + + + +++ AL
Sbjct: 7 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 66
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
+ DHP +VKL V I N ++E C +L +L+ K + S+++
Sbjct: 67 ----TMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRKY--SLDLASLIL 118
Query: 400 ---QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
Q+ +AL YL + +H D+ N+L++ N C +K+ DFGLS+ M++ Y
Sbjct: 119 YAYQLSTALAYLESKR--FVHRDIAARNVLVS-SNDC--VKLGDFGLSRYMEDSTYYK-- 171
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
S+G ++ PE N + +S DVW GV ++ L +G KPF
Sbjct: 172 ----ASKGKLPIKWMAPESI----NFRRFTSASDVWMFGVCMWEILMHGVKPF 216
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 105/232 (45%), Gaps = 26/232 (11%)
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
+ K+ D P +V+ + F + + F +E + I ER + + +V
Sbjct: 77 VLKSHDCPYIVQCFGTFITNTDVF-IAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVK 135
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLS-KVMDEENYNPDHGMDLTS 462
AL YL E K VIH D+KP NILL E G+IK+ DFG+S +++D++ +
Sbjct: 136 ALYYLKE-KHGVIHRDVKPSNILLDER---GQIKLCDFGISGRLVDDKAKD--------- 182
Query: 463 QGAGTYWYLPPECFVVGKNPPKISS-----KVDVWSVGVIFYQCLYGKKPFGHNQSQATI 517
+ AG Y+ PE +PP + + DVWS+G+ + G+ P+ + ++ +
Sbjct: 183 RSAGCAAYMAPERI----DPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV 238
Query: 518 LEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
L + +L+ S + + F++ CL R L H +++
Sbjct: 239 LTK--VLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIK 288
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLK-EQRYVACKVHQLNKDWKEDKKANYIKHAL 339
++ + +R L +G+G F +VH+ + E +A + + + +++ AL
Sbjct: 6 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 65
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
+ DHP +VKL V I N ++E C +L +L+ K + S+++
Sbjct: 66 ----TMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRKY--SLDLASLIL 117
Query: 400 ---QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
Q+ +AL YL + +H D+ N+L++ N C +K+ DFGLS+ M++ Y
Sbjct: 118 YAYQLSTALAYLESKR--FVHRDIAARNVLVS-SNDC--VKLGDFGLSRYMEDSTYYK-- 170
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
S+G ++ PE N + +S DVW GV ++ L +G KPF
Sbjct: 171 ----ASKGKLPIKWMAPESI----NFRRFTSASDVWMFGVCMWEILMHGVKPF 215
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 118/270 (43%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV+ K VA K KED ++ L+E + K + HP +V
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 91
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V ++ F V EY +L YL++ E ++V+ Q+ SA++YL
Sbjct: 92 QLLGVCTLEP-PFYIVTEYMPYGNLLDYLRE---CNREEVTAVVLLYMATQISSAMEYLE 147
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E +V +K+ DFGLS++M + Y G +
Sbjct: 148 --KKNFIHRDLAARNCLVGENHV---VKVADFGLSRLMTGDTYTAHAGAKFPIK------ 196
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQAT-ILEENTILKA 526
+ PE S K DVW+ GV+ ++ YG P+ G + SQ +LE+ ++
Sbjct: 197 WTAPESLAYN----TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQ 252
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E P V +R+C + DR
Sbjct: 253 PE---GCPPKVYE----LMRACWKWSPADR 275
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLK-EQRYVACKVHQLNKDWKEDKKANYIKHAL 339
++ + +R L +G+G F +VH+ + E +A + + + +++ AL
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
+ DHP +VKL V I N ++E C +L +L+ K + S+++
Sbjct: 444 ----TMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRK--FSLDLASLIL 495
Query: 400 ---QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
Q+ +AL YL + +H D+ N+L++ + +K+ DFGLS+ M++ Y
Sbjct: 496 YAYQLSTALAYLESKR--FVHRDIAARNVLVSATDC---VKLGDFGLSRYMEDSTYYK-- 548
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
S+G ++ PE N + +S DVW GV ++ L +G KPF
Sbjct: 549 ----ASKGKLPIKWMAPESI----NFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLK-EQRYVACKVHQLNKDWKEDKKANYIKHAL 339
++ + +R L +G+G F +VH+ + E +A + + + +++ AL
Sbjct: 9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 68
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
+ DHP +VKL V I N ++E C +L +L+ K + S+++
Sbjct: 69 ----TMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRKY--SLDLASLIL 120
Query: 400 ---QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
Q+ +AL YL + +H D+ N+L++ + +K+ DFGLS+ M++ Y
Sbjct: 121 YAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC---VKLGDFGLSRYMEDSTYYK-- 173
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
S+G ++ PE N + +S DVW GV ++ L +G KPF
Sbjct: 174 ----ASKGKLPIKWMAPESI----NFRRFTSASDVWMFGVCMWEILMHGVKPF 218
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 126/298 (42%), Gaps = 27/298 (9%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIK-HALREYNIHKALDHPR 352
+LG+G + V +L + A K+ + K+ +I+ RE + R
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIE--------KQPGHIRSRVFREVEMLYQCQGHR 71
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIK 412
V F + + F V E G + ++ + + E EA +V V SAL +L+
Sbjct: 72 NVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLH--N 129
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGL-SKVMDEENYNPDHGMDLTSQGAGTYWYL 471
+ H DLKP NIL N +KI DF L S + + +P +L + G+ Y+
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTP-CGSAEYM 188
Query: 472 PPECFVVGKNPPKISSK-VDVWSVGVIFYQCLYGKKPF--------GHNQSQATILEENT 522
PE I K D+WS+GVI Y L G PF G ++ +A +N
Sbjct: 189 APEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM 248
Query: 523 ILKATE---VQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
+ ++ + +F +K +S AK I L + R+ + +H ++Q P++
Sbjct: 249 LFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPEN 306
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 121/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 77
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F ++E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 78 QLLGVCTREP-PFYIIIEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 134 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIK------ 182
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 183 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 238
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 239 PE-------GCPEKVYELMRACWQWNPSDR 261
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLK-EQRYVACKVHQLNKDWKEDKKANYIKHAL 339
++ + +R L +G+G F +VH+ + E +A + + + +++ AL
Sbjct: 32 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 91
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
+ DHP +VKL V I N ++E C +L +L+ K + S+++
Sbjct: 92 ----TMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRKY--SLDLASLIL 143
Query: 400 ---QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
Q+ +AL YL + +H D+ N+L++ + +K+ DFGLS+ M++ Y
Sbjct: 144 YAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC---VKLGDFGLSRYMEDSTYYK-- 196
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
S+G ++ PE N + +S DVW GV ++ L +G KPF
Sbjct: 197 ----ASKGKLPIKWMAPESI----NFRRFTSASDVWMFGVCMWEILMHGVKPF 241
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 121/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 72
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F ++E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 73 QLLGVCTREP-PFYIIIEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 129 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIK------ 177
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 178 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 233
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 234 PE-------GCPEKVYELMRACWQWNPSDR 256
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLK-EQRYVACKVHQLNKDWKEDKKANYIKHAL 339
++ + +R L +G+G F +VH+ + E +A + + + +++ AL
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
+ DHP +VKL V I N ++E C +L +L+ K + S+++
Sbjct: 61 ----TMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRKY--SLDLASLIL 112
Query: 400 ---QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
Q+ +AL YL + +H D+ N+L++ N C +K+ DFGLS+ M++ Y
Sbjct: 113 YAYQLSTALAYLESKR--FVHRDIAARNVLVS-SNDC--VKLGDFGLSRYMEDSTYYK-- 165
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
S+G ++ PE N + +S DVW GV ++ L +G KPF
Sbjct: 166 ----ASKGKLPIKWMAPESI----NFRRFTSASDVWMFGVCMWEILMHGVKPF 210
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 29/254 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G G F VH+A VA K+ ++D A + LRE I K L HP +V
Sbjct: 45 IGAGSFGTVHRA--EWHGSDVAVKILM-----EQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA-----EREARSIVMQVVSALKYLN 409
N V EY L Y HK+ A ER S+ V + YL+
Sbjct: 98 LFMGAVTQPPN-LSIVTEYLSRGSL--YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
PP++H +LK N+L+ + +K+ DFGLS++ + + AGT
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKYT---VKVCDFGLSRLKASTFLS-------SKSAAGTPE 204
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEV 529
++ PE V ++ P + K DV+S GVI ++ ++P+G+ + K E+
Sbjct: 205 WMAPE---VLRDEPS-NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEI 260
Query: 530 QFANKPTVSNEAKG 543
P V+ +G
Sbjct: 261 PRNLNPQVAAIIEG 274
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 121/285 (42%), Gaps = 40/285 (14%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G V+ A D+ + VA + L + K++ N I +RE +P +V
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI-LVMRENK------NPNIV 81
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
D + + + V+EY G L + + + E + ++ + + AL++L+ +
Sbjct: 82 NYLDSYLV-GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ-- 137
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPE 474
VIH ++K NILL + G +K+TDFG + E S GT +++ PE
Sbjct: 138 VIHRNIKSDNILL---GMDGSVKLTDFGFCAQITPEQSK-------RSTMVGTPYWMAPE 187
Query: 475 CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANK 534
PK VD+WS+G++ + + G+ P+ L EN + +
Sbjct: 188 VVTRKAYGPK----VDIWSLGIMAIEMIEGEPPY---------LNENPLRALYLIATNGT 234
Query: 535 PTVSNEAK------GFIRSCLAYRKEDRIDVISLARHDYLQPPVP 573
P + N K F+ CL E R L +H +L+ P
Sbjct: 235 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKP 279
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLK-EQRYVACKVHQLNKDWKEDKKANYIKHAL 339
++ + +R L +G+G F +VH+ + E +A + + + +++ AL
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
+ DHP +VKL V I N ++E C +L +L+ K + S+++
Sbjct: 64 ----TMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRKY--SLDLASLIL 115
Query: 400 ---QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
Q+ +AL YL + +H D+ N+L++ + +K+ DFGLS+ M++ Y
Sbjct: 116 YAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC---VKLGDFGLSRYMEDSTYYK-- 168
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
S+G ++ PE N + +S DVW GV ++ L +G KPF
Sbjct: 169 ----ASKGKLPIKWMAPESI----NFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 121/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 72
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F ++E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 73 QLLGVCTREP-PFYIIIEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 129 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIK------ 177
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 178 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 233
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 234 PE-------GCPEKVYELMRACWQWNPSDR 256
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLK-EQRYVACKVHQLNKDWKEDKKANYIKHAL 339
++ + +R L +G+G F +VH+ + E +A + + + +++ AL
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
+ DHP +VKL V I N ++E C +L +L+ K + S+++
Sbjct: 64 ----TMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRKY--SLDLASLIL 115
Query: 400 ---QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
Q+ +AL YL + +H D+ N+L++ + +K+ DFGLS+ M++ Y
Sbjct: 116 YAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC---VKLGDFGLSRYMEDSTYYK-- 168
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
S+G ++ PE N + +S DVW GV ++ L +G KPF
Sbjct: 169 ----ASKGKLPIKWMAPESI----NFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 25/230 (10%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVAC-KVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV + + +C + L + E ++ + L E +I +HP
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREF----LSEASIMGQFEHPN 78
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK----QHKTIAEREARSIVMQVVSALKYL 408
+++L V ++ + E+ + LD +L+ Q I + ++ + S ++YL
Sbjct: 79 IIRLEGVV-TNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYL 134
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
E+ +H DL NIL+ VC K++DFGLS+ ++E + +P L G
Sbjct: 135 AEMS--YVHRDLAARNILVNSNLVC---KVSDFGLSRFLEENSSDPTETSSLG--GKIPI 187
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S D WS G++ ++ + +G++P+ +Q I
Sbjct: 188 RWTAPEAIAFR----KFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVI 233
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 46/262 (17%)
Query: 292 LMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
+ +LG+G F +V KA + + RY A K K ++K + I L E + +L+H
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIK-----KIRHTEEKLSTI---LSEVXLLASLNHQ 62
Query: 352 RVVKLYDVFEIDAN------------SFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIV 398
VV+ Y + N + EYC+ L D ++ E +
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK---------VMDE 449
Q++ AL Y++ +IH +LKP NI + E +KI DFGL+K +D
Sbjct: 123 RQILEALSYIHS--QGIIHRNLKPXNIFIDESR---NVKIGDFGLAKNVHRSLDILKLDS 177
Query: 450 ENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFG 509
+N P +LTS GT Y+ E + K+D +S+G+IF++ +Y PF
Sbjct: 178 QNL-PGSSDNLTS-AIGTAXYVATEVL---DGTGHYNEKIDXYSLGIIFFEXIY---PFS 229
Query: 510 HNQSQATILEENTILKATEVQF 531
+ IL++ L++ ++F
Sbjct: 230 TGXERVNILKK---LRSVSIEF 248
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 279
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 280 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLE 335
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH +L N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 336 --KKNFIHRNLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIK------ 384
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 385 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 440
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 441 PE-------GCPEKVYELMRACWQWNPSDR 463
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K L +D E ++ L+E + K + HP +V
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTME------VEEFLKEAAVMKEIKHPNLV 318
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 319 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLE 374
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH +L N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 375 --KKNFIHRNLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIK------ 423
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 424 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 479
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 480 PE-------GCPEKVYELMRACWQWNPSDR 502
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 106/230 (46%), Gaps = 25/230 (10%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVAC-KVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G G F EV + + +C + L + E ++ + L E +I +HP
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREF----LSEASIMGQFEHPN 76
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK----QHKTIAEREARSIVMQVVSALKYL 408
+++L V ++ + E+ + LD +L+ Q I + ++ + S ++YL
Sbjct: 77 IIRLEGVVT-NSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYL 132
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
E+ +H DL NIL+ VC K++DFGLS+ ++E + +P + L G
Sbjct: 133 AEMS--YVHRDLAARNILVNSNLVC---KVSDFGLSRFLEENSSDPTYTSSLG--GKIPI 185
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
+ PE K +S D WS G++ ++ + +G++P+ +Q I
Sbjct: 186 RWTAPEAIAFR----KFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVI 231
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 276
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 277 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLE 332
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH +L N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 333 --KKNFIHRNLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIK------ 381
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 382 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 437
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 438 PE-------GCPEKVYELMRACWQWNPSDR 460
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 111/243 (45%), Gaps = 49/243 (20%)
Query: 295 LGKGGFSEVHKA--FDLKEQR-YVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
LG+G F +V KA F LK + Y V L KE+ + ++ L E+N+ K ++HP
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKML----KENASPSELRDLLSEFNVLKQVNHP 86
Query: 352 RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA-------------------ER 392
V+KLY D ++EY L +L++ + + ER
Sbjct: 87 HVIKLYGACSQDG-PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 393 -----EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM 447
+ S Q+ ++YL E+ ++H DL NIL+ EG ++KI+DFGLS+ +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMS--LVHRDLAARNILVAEGR---KMKISDFGLSRDV 200
Query: 448 DEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKI-SSKVDVWSVGVIFYQCL-YGK 505
EE+ SQG +P + + I +++ DVWS GV+ ++ + G
Sbjct: 201 YEEDSXVKR-----SQGR-----IPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 250
Query: 506 KPF 508
P+
Sbjct: 251 NPY 253
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 77
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 78 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLE 133
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 134 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIK------ 182
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 183 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 238
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 239 PE-------GCPEKVYELMRACWQWNPSDR 261
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLK-EQRYVACKVHQLNKDWKEDKKANYIKHAL 339
++ + +R L +G+G F +VH+ + E +A + + + +++ AL
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
+ DHP +VKL V I N ++E C +L +L+ K + S+++
Sbjct: 64 ----TMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRK--FSLDLASLIL 115
Query: 400 ---QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
Q+ +AL YL + +H D+ N+L++ + +K+ DFGLS+ M++ Y
Sbjct: 116 YAYQLSTALAYLESKR--FVHRDIAARNVLVSATDC---VKLGDFGLSRYMEDSTYYK-- 168
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
S+G ++ PE N + +S DVW GV ++ L +G KPF
Sbjct: 169 ----ASKGKLPIKWMAPESI----NFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 77
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 78 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 134 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIK------ 182
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 183 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 238
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 239 PE-------GCPEKVYELMRACWQWNPSDR 261
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 73
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 74 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 130 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAPAGAKFPIK------ 178
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 179 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 234
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 235 PE-------GCPEKVYELMRACWQWNPSDR 257
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 144/322 (44%), Gaps = 39/322 (12%)
Query: 259 GYKNLHIRELKRIHNEDQSRFNNHPVLSD----RYLL-LMLLGKGGFSEVHKAFDLKEQR 313
G +NL+ + + R+ +E Q R V+S YL + +G+G V A + +
Sbjct: 13 GRENLYFQSMSRVSHE-QFRAALQLVVSPGDPREYLANFIKIGEGSTGIVCIATEKHTGK 71
Query: 314 YVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEY 373
VA K L K + + N + +R+Y+ H VV +Y + + + V+E+
Sbjct: 72 QVAVKKMDLRKQQRRELLFNEVV-IMRDYH------HDNVVDMYSSYLV-GDELWVVMEF 123
Query: 374 CDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVC 433
+G L + H + E + ++ + V+ AL YL+ VIH D+K +ILLT
Sbjct: 124 LEGGALT-DIVTHTRMNEEQIATVCLSVLRALSYLH--NQGVIHRDIKSDSILLTSD--- 177
Query: 434 GEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWS 493
G IK++DFG + +E + GT +++ PE V+ + P ++VD+WS
Sbjct: 178 GRIKLSDFGFCAQVSKE-------VPKRKXLVGTPYWMAPE--VISRLP--YGTEVDIWS 226
Query: 494 VGVIFYQCLYGKKP-FGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYR 552
+G++ + + G+ P F QA I + + + VS+ +GF+ L
Sbjct: 227 LGIMVIEMIDGEPPYFNEPPLQAM----RRIRDSLPPRVKDLHKVSSVLRGFLDLMLVRE 282
Query: 553 KEDRIDVISLARHDYLQ---PP 571
R L H +L+ PP
Sbjct: 283 PSQRATAQELLGHPFLKLAGPP 304
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
+LL +LG+G + V + K A KV + + +RE+ + K L
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKV------FNNISFLRPVDVQMREFEVLKKL 64
Query: 349 DHPRVVKLYDVFEIDANSF-CTVLEYCDGHDLDFYLKQHKT---IAEREARSIVMQVVSA 404
+H +VKL+ + E ++E+C L L++ + E E ++ VV
Sbjct: 65 NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEI-KITDFGLSKVM-DEENYNPDHGMDLTS 462
+ +L E ++H ++KPGNI+ G + K+TDFG ++ + D+E + +G
Sbjct: 125 MNHLRE--NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYG----- 177
Query: 463 QGAGTYWYLPPECF---VVGKN-PPKISSKVDVWSVGVIFYQCLYGKKPF 508
T YL P+ + V+ K+ K + VD+WS+GV FY G PF
Sbjct: 178 ----TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 72
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 73 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 129 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIK------ 177
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 178 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 233
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 234 PE-------GCPEKVYELMRACWQWNPSDR 256
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 76
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 77 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLE 132
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 133 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIK------ 181
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 182 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 237
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 238 PE-------GCPEKVYELMRACWQWNPSDR 260
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 77
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 78 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 134 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIK------ 182
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 183 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 238
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 239 PE-------GCPEKVYELMRACWQWNPSDR 261
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 36/226 (15%)
Query: 294 LLGKGGFSEVHKAFDLKE---QRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDH 350
++G G F EV+K LK ++ V + L + E ++ ++ L E I H
Sbjct: 51 VIGAGEFGEVYKGM-LKTSSGKKEVPVAIKTLKAGYTEKQRVDF----LGEAGIMGQFSH 105
Query: 351 PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV-------S 403
+++L V + EY + LD +L+ E++ V+Q+V +
Sbjct: 106 HNIIRLEGVIS-KYKPMMIITEYMENGALDKFLR------EKDGEFSVLQLVGMLRGIAA 158
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
+KYL + +H DL NIL+ VC K++DFGLS+V++++ TS
Sbjct: 159 GMKYLANMN--YVHRDLAARNILVNSNLVC---KVSDFGLSRVLEDD----PEATYTTSG 209
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
G + PE + K +S DVWS G++ ++ + YG++P+
Sbjct: 210 GKIPIRWTAPEAI----SYRKFTSASDVWSFGIVMWEVMTYGERPY 251
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 85
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 86 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLE 141
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 142 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIK------ 190
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 191 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 246
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 247 PE-------GCPEKVYELMRACWQWNPSDR 269
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 74
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 75 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 131 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAPAGAKFPIK------ 179
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 180 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 235
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 236 PE-------GCPEKVYELMRACWQWNPSDR 258
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 28/274 (10%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G V A + VA K L K + + N E I + H VV
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN-------EVVIMRDYQHENVV 211
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
++Y+ + + + V+E+ +G L + H + E + ++ + V+ AL L+
Sbjct: 212 EMYNSYLV-GDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQG-- 267
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPE 474
VIH D+K +ILLT G +K++DFG + +E + GT +++ PE
Sbjct: 268 VIHRDIKSDSILLTHD---GRVKLSDFGFCAQVSKE-------VPRRKXLVGTPYWMAPE 317
Query: 475 CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANK 534
++ + P +VD+WS+G++ + + G+ P+ + + I + N
Sbjct: 318 --LISRLP--YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM---KMIRDNLPPRLKNL 370
Query: 535 PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
VS KGF+ L R L +H +L
Sbjct: 371 HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 74
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 75 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 131 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIK------ 179
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 180 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 235
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 236 PE-------GCPEKVYELMRACWQWNPSDR 258
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 74
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 75 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 131 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIK------ 179
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 180 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 235
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 236 PE-------GCPEKVYELMRACWQWNPSDR 258
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 20/228 (8%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
+S + L LLG+G + V A VA K + K + LRE I
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK------KIEPFDKPLFALRTLREIKI 62
Query: 345 HKALDHPRVVKLYDVFEIDA-NSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVV 402
K H ++ ++++ D+ +F V + D + + + +++ + + Q +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE---ENYNPDHGMD 459
A+K L+ VIH DLKP N+L+ N ++K+ DFGL++++DE +N P
Sbjct: 123 RAVKVLHGSN--VIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
++ T WY PE + K S +DVWS G I + L+ ++P
Sbjct: 178 GMTEXVATRWYRAPEVMLTSA---KYSRAMDVWSCGCILAE-LFLRRP 221
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 72
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 73 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 129 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIK------ 177
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 178 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 233
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 234 PE-------GCPEKVYELMRACWQWNPSDR 256
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 72
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 73 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 129 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIK------ 177
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 178 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 233
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 234 PE-------GCPEKVYELMRACWQWNPSDR 256
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 289 YLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
+LL +LG+G + V + K A KV + + +RE+ + K L
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKV------FNNISFLRPVDVQMREFEVLKKL 64
Query: 349 DHPRVVKLYDVFEIDANSF-CTVLEYCDGHDLDFYLKQHKT---IAEREARSIVMQVVSA 404
+H +VKL+ + E ++E+C L L++ + E E ++ VV
Sbjct: 65 NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEI-KITDFGLSKVM-DEENYNPDHGMDLTS 462
+ +L E ++H ++KPGNI+ G + K+TDFG ++ + D+E + +G
Sbjct: 125 MNHLRE--NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYG----- 177
Query: 463 QGAGTYWYLPPECF---VVGKN-PPKISSKVDVWSVGVIFYQCLYGKKPF 508
T YL P+ + V+ K+ K + VD+WS+GV FY G PF
Sbjct: 178 ----TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 28/221 (12%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKV--HQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
+LG G F V+K + E V V LN+ ++ AL I ++DHP
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL----IMASMDHP 100
Query: 352 RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
+V+L V T L G L++ + I + + +Q+ + YL E
Sbjct: 101 HLVRLLGVCLSPTIQLVTQL-MPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER 159
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHG-MDLTSQGAGTY 468
+ ++H DL N+L+ N +KITDFGL++++ DE+ YN D G M +
Sbjct: 160 R--LVHRDLAARNVLVKSPN---HVKITDFGLARLLEGDEKEYNADGGKMPIK------- 207
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
++ EC + K + + DVWS GV ++ + +G KP+
Sbjct: 208 -WMALECI----HYRKFTHQSDVWSYGVTIWELMTFGGKPY 243
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 29/228 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
DRY + L+GKG F +V KA+D EQ +VA K+ + +KKA ++ A E + +
Sbjct: 35 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-------NKKA-FLNQAQIEVRLLE 86
Query: 347 ALD-HPRVVKLYDVFE----IDANSFCTVLEYCDGHDLDFYLKQH-KTIAEREARSIVMQ 400
++ H +K Y V + N C V E + D + + ++ R Q
Sbjct: 87 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQ 146
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+ +AL +L + +IH DLKP NILL IKI DFG S + + Y
Sbjct: 147 MCTALLFLATPELSIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQLGQRIY-------- 197
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
Q + +Y PE V+ P ++ +D+WS+G I + G+ F
Sbjct: 198 --QXIQSRFYRSPE--VLLGMPYDLA--IDMWSLGCILVEMHTGEPLF 239
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 72
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 73 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + Y G +
Sbjct: 129 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIK------ 177
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 178 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 233
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 234 PE-------GCPEKVYELMRACWQWNPSDR 256
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 28/233 (12%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLK-EQRYVACKVHQLNKDWKEDKKANYIKHAL 339
++ + +R L +G+G F +VH+ + E +A + + + +++ AL
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
+ DHP +VKL V I N ++E C +L +L+ K + S+++
Sbjct: 64 ----TMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRK--FSLDLASLIL 115
Query: 400 ---QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
Q+ +AL YL + +H D+ N+L++ + +K+ DFGLS+ M+ D
Sbjct: 116 YAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC---VKLGDFGLSRYME------DS 164
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
S+G ++ PE N + +S DVW GV ++ L +G KPF
Sbjct: 165 TXXKASKGKLPIKWMAPESI----NFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 20/228 (8%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
+S + L LLG+G + V A VA K + K + LRE I
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK------KIEPFDKPLFALRTLREIKI 62
Query: 345 HKALDHPRVVKLYDVFEIDA-NSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVV 402
K H ++ ++++ D+ +F V + D + + + +++ + + Q +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE---ENYNPDHGMD 459
A+K L+ VIH DLKP N+L+ N ++K+ DFGL++++DE +N P
Sbjct: 123 RAVKVLHGSN--VIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
++ T WY PE + K S +DVWS G I + L+ ++P
Sbjct: 178 GMTEYVATRWYRAPEVMLTSA---KYSRAMDVWSCGCILAE-LFLRRP 221
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 29/228 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
DRY + L+GKG F +V KA+D EQ +VA K+ + +KKA ++ A E + +
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-------NKKA-FLNQAQIEVRLLE 105
Query: 347 ALD-HPRVVKLYDVFE----IDANSFCTVLEYCDGHDLDFYLKQH-KTIAEREARSIVMQ 400
++ H +K Y V + N C V E + D + + ++ R Q
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQ 165
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+ +AL +L + +IH DLKP NILL IKI DFG S + + Y
Sbjct: 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQLGQRIY-------- 216
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
Q + +Y PE V+ P ++ +D+WS+G I + G+ F
Sbjct: 217 --QXIQSRFYRSPE--VLLGMPYDLA--IDMWSLGCILVEMHTGEPLF 258
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 28/221 (12%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKV--HQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
+LG G F V+K + E V V LN+ ++ AL I ++DHP
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL----IMASMDHP 77
Query: 352 RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
+V+L V T L G L++ + I + + +Q+ + YL E
Sbjct: 78 HLVRLLGVCLSPTIQLVTQL-MPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER 136
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHG-MDLTSQGAGTY 468
+ ++H DL N+L+ N +KITDFGL++++ DE+ YN D G M +
Sbjct: 137 R--LVHRDLAARNVLVKSPN---HVKITDFGLARLLEGDEKEYNADGGKMPIK------- 184
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
++ EC + K + + DVWS GV ++ + +G KP+
Sbjct: 185 -WMALECI----HYRKFTHQSDVWSYGVTIWELMTFGGKPY 220
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 70
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 71 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + + G +
Sbjct: 127 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTFTAHAGAKFPIK------ 175
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 176 WTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMER 231
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 232 PE-------GCPEKVYELMRACWQWNPSDR 254
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 29/228 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
DRY + L+GKG F +V KA+D EQ +VA K+ + +KKA ++ A E + +
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-------NKKA-FLNQAQIEVRLLE 105
Query: 347 ALD-HPRVVKLYDVFE----IDANSFCTVLEYCDGHDLDFYLKQH-KTIAEREARSIVMQ 400
++ H +K Y V + N C V E + D + + ++ R Q
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQ 165
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+ +AL +L + +IH DLKP NILL IKI DFG S + + Y
Sbjct: 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRXA-IKIVDFGSSCQLGQRIY-------- 216
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
Q + +Y PE V+ P ++ +D+WS+G I + G+ F
Sbjct: 217 --QXIQSRFYRSPE--VLLGMPYDLA--IDMWSLGCILVEMHTGEPLF 258
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 28/274 (10%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G V A + VA K L K + + N E I + H VV
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN-------EVVIMRDYQHENVV 134
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
++Y+ + + + V+E+ +G L + H + E + ++ + V+ AL L+
Sbjct: 135 EMYNSYLV-GDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQG-- 190
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPE 474
VIH D+K +ILLT G +K++DFG + +E + GT +++ PE
Sbjct: 191 VIHRDIKSDSILLTHD---GRVKLSDFGFCAQVSKE-------VPRRKXLVGTPYWMAPE 240
Query: 475 CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANK 534
++ + P +VD+WS+G++ + + G+ P+ + + I + N
Sbjct: 241 --LISRLP--YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM---KMIRDNLPPRLKNL 293
Query: 535 PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
VS KGF+ L R L +H +L
Sbjct: 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 28/229 (12%)
Query: 294 LLGKGGFSEVHK-AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
+LG+G F EV++ + + + V KD D K ++ A+ I K LDHP
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV----IMKNLDHPH 86
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV---MQVVSALKYLN 409
+VKL + E + ++E +L YL+++K + ++V +Q+ A+ YL
Sbjct: 87 IVKLIGIIEEEPTWI--IMELYPYGELGHYLERNKN--SLKVLTLVLYSLQICKAMAYLE 142
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
I +H D+ NIL+ +K+ DFGLS+ +++E+Y L +
Sbjct: 143 SIN--CVHRDIAVRNILVASPEC---VKLGDFGLSRYIEDEDYYKASVTRLPIK------ 191
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
++ PE N + ++ DVW V ++ L +GK+PF +++ I
Sbjct: 192 WMSPESI----NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 236
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 34/240 (14%)
Query: 335 IKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK--TIAER 392
++ L E N+ K L H ++V+LY V + + G LDF LK + +
Sbjct: 52 VQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDF-LKSDEGGKVLLP 110
Query: 393 EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENY 452
+ Q+ + Y+ + IH DL+ N+L++E +C KI DFGL++V+++ Y
Sbjct: 111 KLIDFSAQIAEGMAYIE--RKNYIHRDLRAANVLVSESLMC---KIADFGLARVIEDNEY 165
Query: 453 NPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFG-- 509
G + + PE G + K DVWS G++ Y+ + YGK P+
Sbjct: 166 TAREGAKFPIK------WTAPEAINFG----CFTIKSDVWSFGILLYEIVTYGKIPYPGR 215
Query: 510 HNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
N T L + + E N P +E ++ C + E+R DYLQ
Sbjct: 216 TNADVMTALSQGYRMPRVE----NCP---DELYDIMKMCWKEKAEER------PTFDYLQ 262
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 119/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G F EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 70
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 71 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + G +
Sbjct: 127 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTXTAHAGAKFPIK------ 175
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 176 WTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMER 231
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 232 PE-------GCPEKVYELMRACWQWNPSDR 254
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 73
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F ++E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 74 QLLGVCTREP-PFYIIIEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + G +
Sbjct: 130 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTXTAHAGAKFPIK------ 178
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 179 WTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 234
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 235 PE-------GCPEKVYELMRACWQWNPSDR 257
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 20/228 (8%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
+S + L LLG+G + V A VA K + K + LRE I
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK------KIEPFDKPLFALRTLREIKI 62
Query: 345 HKALDHPRVVKLYDVFEIDA-NSFCTVLEYCDGHDLDFY-LKQHKTIAEREARSIVMQVV 402
K H ++ ++++ D+ +F V + D + + + +++ + + Q +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE---ENYNPDHGMD 459
A+K L+ VIH DLKP N+L+ N ++K+ DFGL++++DE +N P
Sbjct: 123 RAVKVLHGSN--VIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
+ T WY PE + K S +DVWS G I + L+ ++P
Sbjct: 178 GMVEFVATRWYRAPEVMLTSA---KYSRAMDVWSCGCILAE-LFLRRP 221
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 70
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F ++E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 71 QLLGVCTREP-PFYIIIEFMTYGNLLDYLRECN---RQEVSAVVLLYMATQISSAMEYLE 126
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + G +
Sbjct: 127 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTXTAHAGAKFPIK------ 175
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 176 WTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMER 231
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 232 PE-------GCPEKVYELMRACWQWNPSDR 254
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 28/229 (12%)
Query: 294 LLGKGGFSEVHK-AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
+LG+G F EV++ + + + V KD D K ++ A+ I K LDHP
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV----IMKNLDHPH 74
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV---MQVVSALKYLN 409
+VKL + E + ++E +L YL+++K + ++V +Q+ A+ YL
Sbjct: 75 IVKLIGIIEEEPTWI--IMELYPYGELGHYLERNKN--SLKVLTLVLYSLQICKAMAYLE 130
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
I +H D+ NIL+ +K+ DFGLS+ +++E+Y L +
Sbjct: 131 SIN--CVHRDIAVRNILVASPEC---VKLGDFGLSRYIEDEDYYKASVTRLPIK------ 179
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
++ PE N + ++ DVW V ++ L +GK+PF +++ I
Sbjct: 180 WMSPESI----NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 224
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 118/283 (41%), Gaps = 47/283 (16%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+GKG F EV K D + Q+ VA K+ L + E + +E + D V
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ------QEITVLSQCDSSYVT 84
Query: 355 KLYDVFEIDANSFCTVLEYCDGHD-LDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
K Y + + + ++EY G LD L + E + +++ +++ L YL+ K
Sbjct: 85 KYYGSY-LKGSKLWIIMEYLGGGSALD--LLRAGPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
IH D+K N+LL+E G++K+ DFG++ + + + GT +++ P
Sbjct: 142 --IHRDIKAANVLLSEQ---GDVKLADFGVAGQLTDTQIK-------RNTFVGTPFWMAP 189
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFA- 532
E SK D+WS+G+ + G+ P N+ + V F
Sbjct: 190 EVI----QQSAYDSKADIWSLGITAIELAKGEPP-------------NSDMHPMRVLFLI 232
Query: 533 ---NKPTV----SNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
N PT+ + K FI +CL R L +H ++
Sbjct: 233 PKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 28/229 (12%)
Query: 294 LLGKGGFSEVHK-AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
+LG+G F EV++ + + + V KD D K ++ A+ I K LDHP
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV----IMKNLDHPH 70
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV---MQVVSALKYLN 409
+VKL + E + ++E +L YL+++K + ++V +Q+ A+ YL
Sbjct: 71 IVKLIGIIEEEPTWI--IMELYPYGELGHYLERNKN--SLKVLTLVLYSLQICKAMAYLE 126
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
I +H D+ NIL+ +K+ DFGLS+ +++E+Y L +
Sbjct: 127 SIN--CVHRDIAVRNILVASPEC---VKLGDFGLSRYIEDEDYYKASVTRLPIK------ 175
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
++ PE N + ++ DVW V ++ L +GK+PF +++ I
Sbjct: 176 WMSPE----SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 220
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 120/281 (42%), Gaps = 42/281 (14%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G V A + VA K L K + + N E I + H VV
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN-------EVVIMRDYQHENVV 91
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
++Y+ + + + V+E+ +G L + H + E + ++ + V+ AL L+
Sbjct: 92 EMYNSYLV-GDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQG-- 147
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPE 474
VIH D+K +ILLT G +K++DFG + +E + GT +++ PE
Sbjct: 148 VIHRDIKSDSILLTHD---GRVKLSDFGFCAQVSKE-------VPRRKXLVGTPYWMAPE 197
Query: 475 CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANK 534
++ + P +VD+WS+G++ + + G+ P+ + LKA ++ N
Sbjct: 198 --LISRLP--YGPEVDIWSLGIMVIEMVDGEPPYFNEPP----------LKAMKMIRDNL 243
Query: 535 PT-------VSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
P VS KGF+ L R L +H +L
Sbjct: 244 PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 120/281 (42%), Gaps = 42/281 (14%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G V A + VA K L K + + N E I + H VV
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN-------EVVIMRDYQHENVV 89
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
++Y+ + + + V+E+ +G L + H + E + ++ + V+ AL L+
Sbjct: 90 EMYNSYLV-GDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQG-- 145
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPE 474
VIH D+K +ILLT G +K++DFG + +E + GT +++ PE
Sbjct: 146 VIHRDIKSDSILLTHD---GRVKLSDFGFCAQVSKE-------VPRRKXLVGTPYWMAPE 195
Query: 475 CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANK 534
++ + P +VD+WS+G++ + + G+ P+ + LKA ++ N
Sbjct: 196 --LISRLP--YGPEVDIWSLGIMVIEMVDGEPPYFNEPP----------LKAMKMIRDNL 241
Query: 535 PT-------VSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
P VS KGF+ L R L +H +L
Sbjct: 242 PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 119/270 (44%), Gaps = 42/270 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G + EV++ K VA K KED ++ L+E + K + HP +V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL------KEDTME--VEEFLKEAAVMKEIKHPNLV 77
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM-----QVVSALKYLN 409
+L V + F + E+ +L YL++ +E ++V+ Q+ SA++YL
Sbjct: 78 QLLGVCTREP-PFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
K IH DL N L+ E ++ +K+ DFGLS++M + G +
Sbjct: 134 --KKNFIHRDLAARNCLVGENHL---VKVADFGLSRLMTGDTXTAHAGAKFPIK------ 182
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF-GHNQSQA-TILEENTILKA 526
+ PE K S K DVW+ GV+ ++ YG P+ G + SQ +LE++ ++
Sbjct: 183 WTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 238
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
E + +R+C + DR
Sbjct: 239 PE-------GCPEKVYELMRACWQWNPSDR 261
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 120/281 (42%), Gaps = 42/281 (14%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G V A + VA K L K + + N E I + H VV
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN-------EVVIMRDYQHENVV 84
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
++Y+ + + + V+E+ +G L + H + E + ++ + V+ AL L+
Sbjct: 85 EMYNSYLV-GDELWVVMEFLEGGALT-DIVTHTRMNEEQIAAVCLAVLQALSVLH--AQG 140
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPE 474
VIH D+K +ILLT G +K++DFG + +E + GT +++ PE
Sbjct: 141 VIHRDIKSDSILLTHD---GRVKLSDFGFCAQVSKE-------VPRRKXLVGTPYWMAPE 190
Query: 475 CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANK 534
++ + P +VD+WS+G++ + + G+ P+ + LKA ++ N
Sbjct: 191 --LISRLP--YGPEVDIWSLGIMVIEMVDGEPPYFNEPP----------LKAMKMIRDNL 236
Query: 535 P-------TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
P VS KGF+ L R L +H +L
Sbjct: 237 PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 277
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 118/299 (39%), Gaps = 37/299 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y L ++G G + V A+ ++ VA K L +K + L+E
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINL------EKCQTSMDELLKEIQAMS 68
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL-----KQHKT--IAEREARSIVM 399
HP +V Y F + + + G LD +HK+ + E +I+
Sbjct: 69 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
+V+ L+YL+ K IH D+K GNILL E G ++I DFG+S + G D
Sbjct: 129 EVLEGLEYLH--KNGQIHRDVKAGNILLGED---GSVQIADFGVSAFLAT-------GGD 176
Query: 460 LTSQG-----AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQS 513
+T GT ++ PE V + K D+WS G+ + G P+ +
Sbjct: 177 ITRNKVRKTFVGTPCWMAPE---VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM 233
Query: 514 QATILEENTILKATEVQFANKPTVSNEAKGF---IRSCLAYRKEDRIDVISLARHDYLQ 569
+ +L + E +K + K F I CL E R L RH + Q
Sbjct: 234 KVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 27/181 (14%)
Query: 335 IKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK--TIAER 392
++ L E N+ K L H ++V+LY V + + G LDF LK + +
Sbjct: 51 VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDF-LKSDEGGKVLLP 109
Query: 393 EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENY 452
+ Q+ + Y+ + IH DL+ N+L++E +C KI DFGL++V+++ Y
Sbjct: 110 KLIDFSAQIAEGMAYIE--RKNYIHRDLRAANVLVSESLMC---KIADFGLARVIEDNEY 164
Query: 453 NPDHGMDLTSQGAGTYWYLPPE----CFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKP 507
G + W P CF + N VWS G++ Y+ + YGK P
Sbjct: 165 TAREGAKFPIK-----WTAPEAINFGCFTIKSN---------VWSFGILLYEIVTYGKIP 210
Query: 508 F 508
+
Sbjct: 211 Y 211
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 128/296 (43%), Gaps = 37/296 (12%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQR-YVACKVHQLNKDWKEDKKANYIKHALREYN 343
L ++Y++ LG+G F VH+ + ++ Y+A V D KK E +
Sbjct: 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKK---------EIS 53
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT---IAEREARSIVMQ 400
I H ++ L++ FE + E+ G LD + + + + + ERE S V Q
Sbjct: 54 ILNIARHRNILHLHESFE-SMEELVMIFEFISG--LDIFERINTSAFELNEREIVSYVHQ 110
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
V AL++L+ + H+D++P NI+ + IKI +FG ++ + P L
Sbjct: 111 VCEALQFLH--SHNIGHFDIRPENIIY-QTRRSSTIKIIEFGQARQL-----KPGDNFRL 162
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
Y PE +S+ D+WS+G + Y L G PF +Q I E
Sbjct: 163 LFTAPE---YYAPEV----HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII--E 213
Query: 521 NTILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPK 574
N I+ A E F + +S EA F+ L ++ R+ +H +L+ + +
Sbjct: 214 N-IMNA-EYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIER 267
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 120/281 (42%), Gaps = 42/281 (14%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G V A + VA K L K + + N E I + H VV
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN-------EVVIMRDYQHENVV 80
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
++Y+ + + + V+E+ +G L + H + E + ++ + V+ AL L+
Sbjct: 81 EMYNSYLV-GDELWVVMEFLEGGALT-DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG-- 136
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPE 474
VIH D+K +ILLT G +K++DFG + +E + GT +++ PE
Sbjct: 137 VIHRDIKSDSILLTHD---GRVKLSDFGFCAQVSKE-------VPRRKXLVGTPYWMAPE 186
Query: 475 CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANK 534
++ + P +VD+WS+G++ + + G+ P+ + LKA ++ N
Sbjct: 187 --LISRLP--YGPEVDIWSLGIMVIEMVDGEPPYFNEPP----------LKAMKMIRDNL 232
Query: 535 P-------TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
P VS KGF+ L R L +H +L
Sbjct: 233 PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 273
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 20/234 (8%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D + +L ++G+G FSEV + + A K+ +NK W K+ + E ++
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKI--MNK-WDMLKRGE-VSCFREERDVLV 116
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL-KQHKTIAEREARSIVMQVVSAL 405
D + +L+ F+ D N V+EY G DL L K + I AR + ++V A+
Sbjct: 117 NGDRRWITQLHFAFQ-DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAI 175
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
++ + +H D+KP NILL + CG I++ DFG + + G +
Sbjct: 176 DSVHRLG--YVHRDIKPDNILL---DRCGHIRLADFGSCLKLRAD------GTVRSLVAV 224
Query: 466 GTYWYLPPECF---VVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQAT 516
GT YL PE G + D W++GV Y+ YG+ PF + + T
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET 278
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 118/299 (39%), Gaps = 37/299 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y L ++G G + V A+ ++ VA K L +K + L+E
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINL------EKCQTSMDELLKEIQAMS 63
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL-----KQHKT--IAEREARSIVM 399
HP +V Y F + + + G LD +HK+ + E +I+
Sbjct: 64 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
+V+ L+YL+ K IH D+K GNILL E G ++I DFG+S + G D
Sbjct: 124 EVLEGLEYLH--KNGQIHRDVKAGNILLGED---GSVQIADFGVSAFLAT-------GGD 171
Query: 460 LTSQG-----AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQS 513
+T GT ++ PE V + K D+WS G+ + G P+ +
Sbjct: 172 ITRNKVRKTFVGTPCWMAPE---VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM 228
Query: 514 QATILEENTILKATEVQFANKPTVSNEAKGF---IRSCLAYRKEDRIDVISLARHDYLQ 569
+ +L + E +K + K F I CL E R L RH + Q
Sbjct: 229 KVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 287
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L+E + K L H ++V+LY V + V EY L +LK R + +
Sbjct: 310 LQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 367
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ S + Y+ + +H DL+ NIL+ E VC K+ DFGL++++++ Y
Sbjct: 368 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEYTARQ 422
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLY-GKKPF 508
G + + PE + G + + K DVWS G++ + G+ P+
Sbjct: 423 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILLTELTTKGRVPY 465
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 26/171 (15%)
Query: 275 DQSRFNNHPV-----LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKED 329
D + HPV + RY ++ LG G FS V +D++ +R+VA KV +
Sbjct: 14 DYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVK-------- 65
Query: 330 KKANYIKHALREYNIHKAL--------DHPRVVKLYDVFEIDANS---FCTVLEYCDGHD 378
+Y + AL E + K + + VV+L D F+I + C V E H
Sbjct: 66 SAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHL 125
Query: 379 LDFYLKQ-HKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLT 428
L + +K ++ + R +SI+ QV+ L YL+ K +IH D+KP NIL+
Sbjct: 126 LKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHS-KCKIIHTDIKPENILMC 175
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 302 EVHKAFDLKEQRYVACKV--HQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDV 359
+V++A D +R VA K+ L+ D + RE L P VV ++D
Sbjct: 49 DVYEAEDTVRERIVALKLXSETLSSD------PVFRTRXQREARTAGRLQEPHVVPIHDF 102
Query: 360 FEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYD 419
EID + +G DL L++ +A A +IV Q+ SAL + H D
Sbjct: 103 GEIDGQLYVDX-RLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAG--ATHRD 159
Query: 420 LKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG--AGTYWYLPPECFV 477
+KP NIL++ + + DFG++ +E LT G GT +Y PE F
Sbjct: 160 VKPENILVSADDFA---YLVDFGIASATTDEK--------LTQLGNTVGTLYYXAPERF- 207
Query: 478 VGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQ 512
+ + + D++++ + Y+CL G P+ +Q
Sbjct: 208 ---SESHATYRADIYALTCVLYECLTGSPPYQGDQ 239
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 123/295 (41%), Gaps = 33/295 (11%)
Query: 228 RNLHIRELKRIHNEDQSRFNNHPVLSDSYLIGYKNLHIRE---LKRIHNEDQSRFNNHP- 283
R+ I+ L ++ + F + P+L D L + L + L R +D+ N+
Sbjct: 57 RHFIIQSLDNLYRLEGEGFPSIPLLIDHLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDL 116
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
VL ++ +G+G F EV + VA K + D KA + L+E
Sbjct: 117 VLGEQ------IGRGNFGEVFSGRLRADNTLVAVK--SCRETLPPDLKAKF----LQEAR 164
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHD-LDFYLKQHKTIAEREARSIVMQVV 402
I K HP +V+L V V+E G D L F + + + +V
Sbjct: 165 ILKQYSHPNIVRLIGVC-TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
+ ++YL IH DL N L+TE NV +KI+DFG+S+ + Y G+
Sbjct: 224 AGMEYLE--SKCCIHRDLAARNCLVTEKNV---LKISDFGMSREEADGVYAASGGL---- 274
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQAT 516
+ W P N + SS+ DVWS G++ ++ G P+ + +Q T
Sbjct: 275 RQVPVKWTAPE-----ALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 125/299 (41%), Gaps = 38/299 (12%)
Query: 280 NNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHAL 339
N V +D +M LG+G + V K + + +A K + + +E K+ L
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRL------L 97
Query: 340 REYNIH-KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFY---LKQHKTIAEREAR 395
+ +I + +D P V Y + + + +E D FY + + +TI E
Sbjct: 98 MDLDISMRTVDCPFTVTFYGALFREGDVW-ICMELMDTSLDKFYKQVIDKGQTIPEDILG 156
Query: 396 SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK-VMDEENYNP 454
I + +V AL++L+ K VIH D+KP N+L+ N G++K+ DFG+S ++D
Sbjct: 157 KIAVSIVKALEHLHS-KLSVIHRDVKPSNVLI---NALGQVKMCDFGISGYLVDSVAKTI 212
Query: 455 DHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFG----- 509
D AG Y+ PE N S K D+WS+G+ + + P+
Sbjct: 213 D---------AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP 263
Query: 510 HNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
Q + + E + L A + S E F CL ++R L +H +
Sbjct: 264 FQQLKQVVEEPSPQLPADK--------FSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCD-GHDLDFYLKQH-KTIAEREARS 396
L+E + K L H ++V+LY V + V+EY G LDF + K + +
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
+ Q+ S + Y+ + +H DL+ NIL+ E VC K+ DFGL++++++ Y
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEYTARQ 173
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
G + + PE + G + + K DVWS G++
Sbjct: 174 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILL 205
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 20/178 (11%)
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER--EARSIVMQVVSALK 406
+HP V++ Y E D +E C L Y++Q K A E +++ Q S L
Sbjct: 76 EHPNVIR-YFCTEKDRQFQYIAIELCAA-TLQEYVEQ-KDFAHLGLEPITLLQQTTSGLA 132
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIK--ITDFGLSKVMDEENYNPDHGMDLTSQG 464
+L+ + ++H DLKP NIL++ N G+IK I+DFGL K + H S
Sbjct: 133 HLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR----HSFSRRSGV 186
Query: 465 AGTYWYLPPECFV--VGKNPPKISSKVDVWSVGVIFYQCLY-GKKPFGHN-QSQATIL 518
GT ++ PE +NP + VD++S G +FY + G PFG + Q QA IL
Sbjct: 187 PGTEGWIAPEMLSEDCKENP---TYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL 241
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 37/231 (16%)
Query: 295 LGKGGFSEVHKA--FDL-KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
LG+G F +V A ++L EQ + V L +D N K RE + L H
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTL-----KDASDNARKDFHREAELLTNLQHE 75
Query: 352 RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH-------------KTIAEREARSIV 398
+VK Y V ++ + V EY DL+ +L+ H + + + I
Sbjct: 76 HIVKFYGVC-VEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIA 134
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGM 458
Q+ + + YL +H DL N L+ E + +KI DFG+S+ + +Y G
Sbjct: 135 QQIAAGMVYLA--SQHFVHRDLATRNCLVGENLL---VKIGDFGMSRDVYSTDYYRVGGH 189
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
+ ++PPE + K +++ DVWS+GV+ ++ YGK+P+
Sbjct: 190 TMLPIR-----WMPPESIMY----RKFTTESDVWSLGVVLWEIFTYGKQPW 231
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 21/222 (9%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
++Y L L+G+G + V K + R VA K + D K KK A+RE + K
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKI-----AMREIKLLK 79
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
L H +V L +V + + V E+ D LD + + + + Q+++ +
Sbjct: 80 QLRHENLVNLLEVCK-KKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIG 138
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
+ + +IH D+KP NIL+++ V +K+ DFG ++ + ++
Sbjct: 139 FCHS--HNIIHRDIKPENILVSQSGV---VKLCDFGFARTLAAPG-------EVYDDEVA 186
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE V K VDVW++G + + G+ F
Sbjct: 187 TRWYRAPELLV---GDVKYGKAVDVWAIGCLVTEMFMGEPLF 225
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKD---WKEDKKANYIKHALREYNIHKA 347
LM+LGKG F +V + A K+ L KD +D + ++ + +
Sbjct: 345 FLMVLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRV----LALP 398
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKY 407
P + +L+ F+ + V+EY +G DL ++++Q E A ++ L +
Sbjct: 399 GKPPFLTQLHSCFQT-MDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 457
Query: 408 LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGT 467
L +I+ DLK N++L G IKI DFG+ K N G+ T GT
Sbjct: 458 LQS--KGIIYRDLKLDNVMLDSE---GHIKIADFGMCK------ENIWDGV-TTKXFCGT 505
Query: 468 YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQ--ATILEENT 522
Y+ PE ++ P VD W+ GV+ Y+ L G+ PF G ++ + +I+E N
Sbjct: 506 PDYIAPE--IIAYQP--YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV 559
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 43/235 (18%)
Query: 295 LGKGGF-----SEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LG+G F +E H +++ VA K K+ E + ++ RE + L
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKA---LKEASESARQDF----QREAELLTMLQ 101
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH----KTIAERE-----------A 394
H +V+ + V + V EY DL+ +L+ H K +A E
Sbjct: 102 HQHIVRFFGVCT-EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 160
Query: 395 RSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNP 454
++ QV + + YL + +H DL N L+ +G V +KI DFG+S+ + +Y
Sbjct: 161 LAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLV---VKIGDFGMSRDIYSTDYYR 215
Query: 455 DHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
G + W +PPE + K +++ DVWS GV+ ++ YGK+P+
Sbjct: 216 VGGRTMLP----IRW-MPPESILY----RKFTTESDVWSFGVVLWEIFTYGKQPW 261
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ K L H R+V+LY V + + EY + L +LK I + +
Sbjct: 66 LAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 123
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ + ++ E IH DL+ NIL+++ C KI DFGL++++++ Y
Sbjct: 124 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEYTARE 178
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQA 515
G + + PE G + K DVWS G++ + + +G+ P+ +
Sbjct: 179 GAKFPIK------WTAPEAINYG----TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 228
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
I +N V+ N P E +R C R EDR
Sbjct: 229 VI--QNLERGYRMVRPDNCP---EELYQLMRLCWKERPEDR 264
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G F EV A K + VA K + + ++ L E N+ K L H ++V
Sbjct: 196 LGAGQFGEVWMATYNKHTK-VAVKTMK--------PGSMSVEAFLAEANVMKTLQHDKLV 246
Query: 355 KLYDVFEIDANSFCTVLEY-CDGHDLDFYLKQHKTIAEREARSI--VMQVVSALKYLNEI 411
KL+ V + + E+ G LDF LK + + + I Q+ + ++ +
Sbjct: 247 KLHAV--VTKEPIYIITEFMAKGSLLDF-LKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 303
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
IH DL+ NIL++ VC KI DFGL++V+++ Y G + +
Sbjct: 304 N--YIHRDLRAANILVSASLVC---KIADFGLARVIEDNEYTAREGAKFPIK------WT 352
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
PE G + K DVWS G++ + + YG+ P+
Sbjct: 353 APEAINFG----SFTIKSDVWSFGILLMEIVTYGRIPY 386
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 367 FCTVLEYCDGHDLDFYLKQHKTIAE-REARSIVMQVVSALKYLNEIKPPVIHYDLKPGNI 425
V ++C+G L +L +T E ++ I Q + YL+ +IH DLK NI
Sbjct: 82 LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH--AKSIIHRDLKSNNI 139
Query: 426 LLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKI 485
L E N +KI DFGL+ V + ++ H + Q +G+ ++ PE + + P
Sbjct: 140 FLHEDNT---VKIGDFGLATV--KSRWSGSHQFE---QLSGSILWMAPEVIRMQDSNP-Y 190
Query: 486 SSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
S + DV++ G++ Y+ + G+ P+ + ++ I+E
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIE 224
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCD-GHDLDFYLKQH-KTIAEREARS 396
L+E + K L H ++V+LY V + V+EY G LDF + K + +
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVD 118
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
+ Q+ S + Y+ + +H DL+ NIL+ E VC K+ DFGL++++++ Y
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEYTARQ 173
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
G + + PE + G + + K DVWS G++
Sbjct: 174 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILL 205
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G F EV A K + VA K + + ++ L E N+ K L H ++V
Sbjct: 23 LGAGQFGEVWMATYNKHTK-VAVKTMK--------PGSMSVEAFLAEANVMKTLQHDKLV 73
Query: 355 KLYDVFEIDANSFCTVLEY-CDGHDLDFYLKQHKTIAEREARSI--VMQVVSALKYLNEI 411
KL+ V + + E+ G LDF LK + + + I Q+ + ++ +
Sbjct: 74 KLHAV--VTKEPIYIITEFMAKGSLLDF-LKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 130
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
IH DL+ NIL++ VC KI DFGL++V+++ Y G + +
Sbjct: 131 N--YIHRDLRAANILVSASLVC---KIADFGLARVIEDNEYTAREGAKFPIK------WT 179
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
PE G + K DVWS G++ + + YG+ P+
Sbjct: 180 APEAINFG----SFTIKSDVWSFGILLMEIVTYGRIPY 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 19/162 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L+E + K L H ++V+LY V + V EY + L +LK R + +
Sbjct: 58 LQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD 115
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ S + Y+ + +H DL+ NIL+ E VC K+ DFGL++++++ Y
Sbjct: 116 MSAQIASGMAYVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEYTARQ 170
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
G + + PE + G + + K DVWS G++
Sbjct: 171 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILL 202
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L+E + K L H ++V+LY V + V EY L +LK R + +
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ S + Y+ + +H DL+ NIL+ E VC K+ DFGL++++++ Y
Sbjct: 285 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEYTARQ 339
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
G + + PE + G + + K DVWS G++
Sbjct: 340 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILL 371
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ K L H R+V+LY V + + EY + L +LK I + +
Sbjct: 62 LAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ + ++ E IH DL+ NIL+++ C KI DFGL++++++ Y
Sbjct: 120 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEYTARE 174
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQA 515
G + + PE G + K DVWS G++ + + +G+ P+ +
Sbjct: 175 GAKFPIK------WTAPEAINYG----TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 224
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
I +N V+ N P E +R C R EDR
Sbjct: 225 VI--QNLERGYRMVRPDNCP---EELYQLMRLCWKERPEDR 260
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L+E + K L H ++V+LY V + V EY L +LK R + +
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ S + Y+ + +H DL+ NIL+ E VC K+ DFGL++++++ Y
Sbjct: 285 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEYTARQ 339
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
G + + PE + G + + K DVWS G++
Sbjct: 340 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILL 371
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ K L H R+V+LY V + + EY + L +LK I + +
Sbjct: 61 LAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 118
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ + ++ E IH DL+ NIL+++ C KI DFGL++++++ Y
Sbjct: 119 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEYTARE 173
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQA 515
G + + PE G + K DVWS G++ + + +G+ P+ +
Sbjct: 174 GAKFPIK------WTAPEAINYG----TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 223
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
I +N V+ N P E +R C R EDR
Sbjct: 224 VI--QNLERGYRMVRPDNCP---EELYQLMRLCWKERPEDR 259
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 17/116 (14%)
Query: 395 RSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNP 454
+ I+ V+++ Y++ K + H D+KP NIL+ + G +K++DFG S+ M
Sbjct: 154 KCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDKN---GRVKLSDFGESEYM------- 202
Query: 455 DHGMDLTSQGA-GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFG 509
+D +G+ GTY ++PPE F +KVD+WS+G+ Y Y PF
Sbjct: 203 ---VDKKIKGSRGTYEFMPPEFF--SNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 282 HPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
P+ D +L +LG+GGF EV + ACK + K+ Y + A+ E
Sbjct: 180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKK---RLKKRKGY-QGAMVE 235
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL----KQHKTIAEREARSI 397
I + +V L FE + C V+ +G D+ +++ + + E A
Sbjct: 236 KKILAKVHSRFIVSLAYAFETKTD-LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
Q+VS L++L++ +I+ DLKP N+LL + G ++I+D GL+ + G
Sbjct: 295 TAQIVSGLEHLHQRN--IIYRDLKPENVLLDDD---GNVRISDLGLAVELKA-------G 342
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T AGT ++ PE ++G+ + VD +++GV Y+ + + PF
Sbjct: 343 QTKTKGYAGTPGFMAPE-LLLGE---EYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 364 ANSFCTVLEYCDGHDLDFYLKQHKTIAE-REARSIVMQVVSALKYLNEIKPPVIHYDLKP 422
A V ++C+G L +L +T E ++ I Q + YL+ +IH DLK
Sbjct: 91 APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH--AKSIIHRDLKS 148
Query: 423 GNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNP 482
NI L E N +KI DFGL+ ++ ++ H + Q +G+ ++ PE + +
Sbjct: 149 NNIFLHEDNT---VKIGDFGLAT--EKSRWSGSHQFE---QLSGSILWMAPEVIRMQDSN 200
Query: 483 PKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
P S + DV++ G++ Y+ + G+ P+ + ++ I+E
Sbjct: 201 P-YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIE 236
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E I K L H ++V+LY V + V EY + L +LK + A + +
Sbjct: 52 LEEAQIMKKLKHDKLVQLYAV--VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVD 109
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M QV + + Y+ + IH DL+ NIL+ G +C KI DFGL++++++
Sbjct: 110 MAAQVAAGMAYIERMN--YIHRDLRSANILVGNGLIC---KIADFGLARLIEDNEXTARQ 164
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLY-GKKPF 508
G + + PE + G + + K DVWS G++ + + G+ P+
Sbjct: 165 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILLTELVTKGRVPY 207
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 23/222 (10%)
Query: 294 LLGKGGFSEV-HKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++GKG F V H + + Q + C + L++ + ++ LRE + + L+HP
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI----TEMQQVEAFLREGLLMRGLNHPN 83
Query: 353 VVKLYDVFEIDANSFCTVLEY-CDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
V+ L + +L Y C G L F + ++ S +QV ++YL E
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK-VMDEENYNPDHGMDLTSQGAGTYWY 470
K +H DL N +L E +K+ DFGL++ ++D E Y S +
Sbjct: 144 K--FVHRDLAARNCMLDESFT---VKVADFGLARDILDREYY---------SVQQHRHAR 189
Query: 471 LPPECFVV-GKNPPKISSKVDVWSVGVIFYQCLY-GKKPFGH 510
LP + + + ++K DVWS GV+ ++ L G P+ H
Sbjct: 190 LPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRH 231
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 282 HPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
P+ D +L +LG+GGF EV + ACK + K+ Y + A+ E
Sbjct: 180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKK---RLKKRKGY-QGAMVE 235
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL----KQHKTIAEREARSI 397
I + +V L FE + C V+ +G D+ +++ + + E A
Sbjct: 236 KKILAKVHSRFIVSLAYAFETKTD-LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
Q+VS L++L++ +I+ DLKP N+LL + G ++I+D GL+ + G
Sbjct: 295 TAQIVSGLEHLHQRN--IIYRDLKPENVLLDDD---GNVRISDLGLAVELKA-------G 342
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T AGT ++ PE ++G+ + VD +++GV Y+ + + PF
Sbjct: 343 QTKTKGYAGTPGFMAPE-LLLGE---EYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 282 HPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
P+ D +L +LG+GGF EV + ACK + K+ Y + A+ E
Sbjct: 180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKK---RLKKRKGY-QGAMVE 235
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL----KQHKTIAEREARSI 397
I + +V L FE + C V+ +G D+ +++ + + E A
Sbjct: 236 KKILAKVHSRFIVSLAYAFETKTD-LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
Q+VS L++L++ +I+ DLKP N+LL + G ++I+D GL+ + G
Sbjct: 295 TAQIVSGLEHLHQRN--IIYRDLKPENVLLDDD---GNVRISDLGLAVELKA-------G 342
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T AGT ++ PE ++G+ + VD +++GV Y+ + + PF
Sbjct: 343 QTKTKGYAGTPGFMAPE-LLLGE---EYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 19/162 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCD-GHDLDFYLKQH-KTIAEREARS 396
L+E + K L H ++V+LY V + V EY G LDF + K + +
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
+ Q+ S + Y+ + +H DL+ NIL+ E VC K+ DFGL++++++ Y
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEYTARQ 173
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
G + + PE + G + + K DVWS G++
Sbjct: 174 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILL 205
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 19/162 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCD-GHDLDFYLKQH-KTIAEREARS 396
L+E + K L H ++V+LY V + V EY G LDF + K + +
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
+ Q+ S + Y+ + +H DL+ NIL+ E VC K+ DFGL++++++ Y
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEYTARQ 173
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
G + + PE + G + + K DVWS G++
Sbjct: 174 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILL 205
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 25/236 (10%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDH 350
LM+LGKG F +V + A K+ + + ++D ++ + E +
Sbjct: 24 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDD----VECTMVEKRVLALPGK 79
Query: 351 P-RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
P + +L+ F+ + V+EY +G DL ++++Q E A ++ L +L
Sbjct: 80 PPFLTQLHSCFQT-MDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 138
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
+I+ DLK N++L G IKI DFG+ K N G+ T GT
Sbjct: 139 --SKGIIYRDLKLDNVMLDSE---GHIKIADFGMCK------ENIWDGVT-TKXFCGTPD 186
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQA--TILEENT 522
Y+ PE ++ P VD W+ GV+ Y+ L G+ PF G ++ + +I+E N
Sbjct: 187 YIAPE--IIAYQP--YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV 238
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 30/207 (14%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA-LREYNIHKALDHPRV 353
LG+G F EV R VA K K N A L+E + K L H ++
Sbjct: 193 LGQGCFGEVWMGTWNGTTR-VAIKTL---------KPGNMSPEAFLQEAQVMKKLRHEKL 242
Query: 354 VKLYDVFEIDANSFCTVLEYCD-GHDLDFYLKQH-KTIAEREARSIVMQVVSALKYLNEI 411
V+LY V + V EY G LDF + K + + + Q+ S + Y+ +
Sbjct: 243 VQLYAV--VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 300
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
+H DL+ NIL+ E VC K+ DFGL +++++ Y G + +
Sbjct: 301 N--YVHRDLRAANILVGENLVC---KVADFGLGRLIEDNEYTARQGAKFPIK------WT 349
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIF 498
PE + G + + K DVWS G++
Sbjct: 350 APEAALYG----RFTIKSDVWSFGILL 372
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 43/235 (18%)
Query: 295 LGKGGF-----SEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LG+G F +E H +++ VA K K+ E + ++ RE + L
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKA---LKEASESARQDF----QREAELLTMLQ 78
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH----KTIAERE-----------A 394
H +V+ + V + V EY DL+ +L+ H K +A E
Sbjct: 79 HQHIVRFFGVCT-EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 137
Query: 395 RSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNP 454
++ QV + + YL + +H DL N L+ +G V +KI DFG+S+ + +Y
Sbjct: 138 LAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLV---VKIGDFGMSRDIYSTDYYR 192
Query: 455 DHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
G + ++PPE + K +++ DVWS GV+ ++ YGK+P+
Sbjct: 193 VGGRTMLPIR-----WMPPESILY----RKFTTESDVWSFGVVLWEIFTYGKQPW 238
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 43/235 (18%)
Query: 295 LGKGGF-----SEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LG+G F +E H +++ VA K K+ E + ++ RE + L
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKA---LKEASESARQDF----QREAELLTMLQ 72
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH----KTIAERE-----------A 394
H +V+ + V + V EY DL+ +L+ H K +A E
Sbjct: 73 HQHIVRFFGVCT-EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 131
Query: 395 RSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNP 454
++ QV + + YL + +H DL N L+ +G V +KI DFG+S+ + +Y
Sbjct: 132 LAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLV---VKIGDFGMSRDIYSTDYYR 186
Query: 455 DHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
G + ++PPE + K +++ DVWS GV+ ++ YGK+P+
Sbjct: 187 VGGRTMLPIR-----WMPPESILY----RKFTTESDVWSFGVVLWEIFTYGKQPW 232
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 365 NSFCTVLEYCDGHDLDFYLKQHKTIAER-EARSIVMQVVSALKYLNEIKPPVIHYDLKPG 423
++ V ++C+G L +L +T + + I Q + YL+ +IH D+K
Sbjct: 104 DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA--KNIIHRDMKSN 161
Query: 424 NILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPP 483
NI L EG +KI DFGL+ V + G Q G+ ++ PE + N P
Sbjct: 162 NIFLHEGLT---VKIGDFGLATVKSRWS-----GSQQVEQPTGSVLWMAPEVIRMQDNNP 213
Query: 484 KISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
S + DV+S G++ Y+ + G+ P+ H ++ I+
Sbjct: 214 -FSFQSDVYSYGIVLYELMTGELPYSHINNRDQII 247
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L+E + K L H ++V+LY V + V EY L +LK R + +
Sbjct: 54 LQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 111
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ S + Y+ + +H DL+ NIL+ E VC K+ DFGL++++++ Y
Sbjct: 112 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEYTARQ 166
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
G + + PE + G + + K DVWS G++
Sbjct: 167 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILL 198
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 282 HPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
P+ D +L +LG+GGF EV + ACK + K+ Y + A+ E
Sbjct: 180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKK---RLKKRKGY-QGAMVE 235
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL----KQHKTIAEREARSI 397
I + +V L FE + C V+ +G D+ +++ + + E A
Sbjct: 236 KKILAKVHSRFIVSLAYAFETKTD-LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
Q+VS L++L++ +I+ DLKP N+LL + G ++I+D GL+ + G
Sbjct: 295 TAQIVSGLEHLHQRN--IIYRDLKPENVLLDDD---GNVRISDLGLAVELKA-------G 342
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T AGT ++ PE ++G+ + VD +++GV Y+ + + PF
Sbjct: 343 QTKTKGYAGTPGFMAPE-LLLGE---EYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ K L H R+V+LY V + + EY + L +LK I + +
Sbjct: 56 LAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ + ++ E IH DL+ NIL+++ C KI DFGL++++++ Y
Sbjct: 114 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEYTARE 168
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQA 515
G + + PE G + K DVWS G++ + + +G+ P+ +
Sbjct: 169 GAKFPIK------WTAPEAINYG----TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 218
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
I +N V+ N P E +R C R EDR
Sbjct: 219 VI--QNLERGYRMVRPDNCP---EELYQLMRLCWKERPEDR 254
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 367 FCTVLEYCDGHDLDFYLKQHKTIAE-REARSIVMQVVSALKYLNEIKPPVIHYDLKPGNI 425
V ++C+G L +L +T E ++ I Q + YL+ +IH DLK NI
Sbjct: 94 LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH--AKSIIHRDLKSNNI 151
Query: 426 LLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKI 485
L E N +KI DFGL+ ++ ++ H + Q +G+ ++ PE + + P
Sbjct: 152 FLHEDNT---VKIGDFGLAT--EKSRWSGSHQFE---QLSGSILWMAPEVIRMQDSNP-Y 202
Query: 486 SSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
S + DV++ G++ Y+ + G+ P+ + ++ I+E
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIE 236
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 19/162 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCD-GHDLDFYLKQH-KTIAEREARS 396
L+E + K L H ++V+LY V + V EY G LDF + K + +
Sbjct: 50 LQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 107
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
+ Q+ S + Y+ + +H DL+ NIL+ E VC K+ DFGL++++++ Y
Sbjct: 108 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEYTARQ 162
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
G + + PE + G + + K DVWS G++
Sbjct: 163 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILL 194
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 19/162 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCD-GHDLDFYLKQH-KTIAEREARS 396
L+E + K L H ++V+LY V + V EY G LDF + K + +
Sbjct: 52 LQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 109
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
+ Q+ S + Y+ + +H DL+ NIL+ E VC K+ DFGL++++++ Y
Sbjct: 110 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEYTARQ 164
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
G + + PE + G + + K DVWS G++
Sbjct: 165 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILL 196
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 23/221 (10%)
Query: 292 LMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH-KALDH 350
+M LG+G + V K + + +A K + + +E K+ L + +I + +D
Sbjct: 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRL------LMDLDISMRTVDC 65
Query: 351 PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFY---LKQHKTIAEREARSIVMQVVSALKY 407
P V Y + + + +E D FY + + +TI E I + +V AL++
Sbjct: 66 PFTVTFYGALFREGDVW-ICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 124
Query: 408 LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGT 467
L+ K VIH D+KP N+L+ N G++K+ DFG+S + + D D+ AG
Sbjct: 125 LHS-KLSVIHRDVKPSNVLI---NALGQVKMCDFGISGYLVD-----DVAKDID---AGC 172
Query: 468 YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
Y+ PE N S K D+WS+G+ + + P+
Sbjct: 173 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY 213
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ K L H R+V+LY V + + EY + L +LK I + +
Sbjct: 51 LAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 108
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ + ++ E IH DL+ NIL+++ C KI DFGL++++++ Y
Sbjct: 109 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEYTARE 163
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQA 515
G + + PE G + K DVWS G++ + + +G+ P+ +
Sbjct: 164 GAKFPIK------WTAPEAINYG----TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 213
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
I +N V+ N P E +R C R EDR
Sbjct: 214 VI--QNLERGYRMVRPDNCP---EELYQLMRLCWKERPEDR 249
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 106/241 (43%), Gaps = 29/241 (12%)
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR--------SIVMQ 400
DHP V++ Y E LE C+ + D L + K +++ + S++ Q
Sbjct: 85 DHPNVIRYY-CSETTDRFLYIALELCNLNLQD--LVESKNVSDENLKLQKEYNPISLLRQ 141
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLT----------EGNVCGEIKITDFGLSKVMDEE 450
+ S + +L+ +K +IH DLKP NIL++ G I I+DFGL K +D
Sbjct: 142 IASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 451 NYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLY-GKKPFG 509
++ +GT + PE + +++ +D++S+G +FY L GK PFG
Sbjct: 200 QXXFRXNLN---NPSGTSGWRAPE-LLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 255
Query: 510 HNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
S+ + + I E++ + ++ EA I + + R + + RH
Sbjct: 256 DKYSRESNIIRG-IFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW 314
Query: 570 P 570
P
Sbjct: 315 P 315
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 106/241 (43%), Gaps = 29/241 (12%)
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR--------SIVMQ 400
DHP V++ Y E LE C+ + D L + K +++ + S++ Q
Sbjct: 85 DHPNVIRYY-CSETTDRFLYIALELCNLNLQD--LVESKNVSDENLKLQKEYNPISLLRQ 141
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLT----------EGNVCGEIKITDFGLSKVMDEE 450
+ S + +L+ +K +IH DLKP NIL++ G I I+DFGL K +D
Sbjct: 142 IASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 451 NYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLY-GKKPFG 509
++ +GT + PE + +++ +D++S+G +FY L GK PFG
Sbjct: 200 QXXFRXNLN---NPSGTSGWRAPE-LLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 255
Query: 510 HNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
S+ + + I E++ + ++ EA I + + R + + RH
Sbjct: 256 DKYSRESNIIRG-IFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW 314
Query: 570 P 570
P
Sbjct: 315 P 315
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L+E + K L H ++V+LY V + V EY L +LK R + +
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ S + Y+ + +H DL+ NIL+ E VC K+ DFGL++++++ Y
Sbjct: 285 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEYTARQ 339
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
G + + PE + G + + K DVWS G++
Sbjct: 340 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILL 371
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 19/162 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L+E + K L H ++V+LY V + V EY + L +LK R + +
Sbjct: 58 LQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD 115
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ S + Y+ + +H DL+ NIL+ E VC K+ DFGL++++++ +
Sbjct: 116 MSAQIASGMAYVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEWTARQ 170
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
G + + PE + G + + K DVWS G++
Sbjct: 171 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILL 202
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR--------SIVMQ 400
DHP V++ Y E LE C+ + D L + K +++ + S++ Q
Sbjct: 67 DHPNVIRYY-CSETTDRFLYIALELCNLNLQD--LVESKNVSDENLKLQKEYNPISLLRQ 123
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLT----------EGNVCGEIKITDFGLSKVMDEE 450
+ S + +L+ +K +IH DLKP NIL++ G I I+DFGL K +D
Sbjct: 124 IASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 451 NYNPDHGMDLTSQGAGTYWYLPPECFVVGKN---PPKISSKVDVWSVGVIFYQCLY-GKK 506
+ ++ +GT + PE N +++ +D++S+G +FY L GK
Sbjct: 182 QSSFRTNLN---NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
Query: 507 PFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHD 566
PFG S+ + + I E++ + ++ EA I + + R + + RH
Sbjct: 239 PFGDKYSRESNIIRG-IFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
Query: 567 YLQP 570
P
Sbjct: 298 LFWP 301
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 19/162 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCD-GHDLDFYLKQH-KTIAEREARS 396
L+E + K L H ++V+LY V + V EY G LDF + K + +
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVD 118
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
+ Q+ S + Y+ + +H DL+ NIL+ E VC K+ DFGL++++++ Y
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEYTARQ 173
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
G + + PE + G + + K DVWS G++
Sbjct: 174 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILL 205
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 19/162 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCD-GHDLDFYLKQH-KTIAEREARS 396
L+E + K + H ++V+LY V + V EY G LDF + K + +
Sbjct: 61 LQEAQVMKKIRHEKLVQLYAV--VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
+ Q+ S + Y+ + +H DL+ NIL+ E VC K+ DFGL++++++ Y
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEYTARQ 173
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
G + + PE + G + + K DVWS G++
Sbjct: 174 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILL 205
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 117/283 (41%), Gaps = 47/283 (16%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+GKG F EV+K D + VA K+ L + E + +E + D P +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ------QEITVLSQCDSPYIT 80
Query: 355 KLYDVFEIDANSFCTVLEYCDGHD-LDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP 413
+ + + + + ++EY G LD L + + E +I+ +++ L YL+ +
Sbjct: 81 RYFGSY-LKSTKLWIIMEYLGGGSALD--LLKPGPLEETYIATILREILKGLDYLHSERK 137
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
IH D+K N+LL+E G++K+ DFG++ + + + GT +++ P
Sbjct: 138 --IHRDIKAANVLLSEQ---GDVKLADFGVAGQLTDTQIK-------RNXFVGTPFWMAP 185
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFA- 532
E K D+WS+G+ + G+ P N+ L V F
Sbjct: 186 EVI----KQSAYDFKADIWSLGITAIELAKGEPP-------------NSDLHPMRVLFLI 228
Query: 533 ---NKPTV----SNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
+ PT+ S K F+ +CL R L +H ++
Sbjct: 229 PKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFI 271
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR--------SIVMQ 400
DHP V++ Y E LE C+ + D L + K +++ + S++ Q
Sbjct: 67 DHPNVIRYY-CSETTDRFLYIALELCNLNLQD--LVESKNVSDENLKLQKEYNPISLLRQ 123
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLT----------EGNVCGEIKITDFGLSKVMDEE 450
+ S + +L+ +K +IH DLKP NIL++ G I I+DFGL K +D
Sbjct: 124 IASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 451 NYNPDHGMDLTSQGAGTYWYLPPECFVVGKN---PPKISSKVDVWSVGVIFYQCLY-GKK 506
++ +GT + PE N +++ +D++S+G +FY L GK
Sbjct: 182 QXXFRXNLN---NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
Query: 507 PFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHD 566
PFG S+ + + I E++ + ++ EA I + + R + + RH
Sbjct: 239 PFGDKYSRESNIIRG-IFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
Query: 567 YLQP 570
P
Sbjct: 298 LFWP 301
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCD-GHDLDFYLKQH-KTIAEREARS 396
L+E + K L H ++V+LY V + V EY G LDF + K + +
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
+ Q+ S + Y+ + +H DL NIL+ E VC K+ DFGL++++++ Y
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLAAANILVGENLVC---KVADFGLARLIEDNEYTARQ 173
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
G + + PE + G + + K DVWS G++
Sbjct: 174 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILL 205
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 25/224 (11%)
Query: 285 LSDRYL-LLMLLGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
+R+L L LGKG F V +D L++ V +L +E +++ RE
Sbjct: 14 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE-----HLRDFERE 68
Query: 342 YNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVM 399
I K+L H +VK V + + ++EY L YL++HK I +
Sbjct: 69 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 128
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q+ ++YL + IH DL NIL+ N +KI DFGL+KV+ ++
Sbjct: 129 QICKGMEYLGTKR--YIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDK----EXXK 179
Query: 460 LTSQGAG-TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
+ G +WY P K S DVWS GV+ Y+
Sbjct: 180 VKEPGESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELF 218
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 97/228 (42%), Gaps = 25/228 (10%)
Query: 281 NHPVLSDRYL-LLMLLGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKH 337
N +R+L L LGKG F V +D L++ V +L +E +++
Sbjct: 21 NMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE-----HLRD 75
Query: 338 ALREYNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREAR 395
RE I K+L H +VK V + + ++EY L YL++HK I +
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 135
Query: 396 SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPD 455
Q+ ++YL + IH DL NIL+ N +KI DFGL+KV+ ++
Sbjct: 136 QYTSQICKGMEYLGTKR--YIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDK---- 186
Query: 456 HGMDLTSQGAG-TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
+ G +WY P K S DVWS GV+ Y+
Sbjct: 187 EXXKVKEPGESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELF 229
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 27/225 (12%)
Query: 285 LSDRYL-LLMLLGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
+R+L L LGKG F V +D L++ V +L +E +++ RE
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE-----HLRDFERE 61
Query: 342 YNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVM 399
I K+L H +VK V + + ++EY L YL++HK I +
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHG 457
Q+ ++YL + IH DL NIL+ N +KI DFGL+KV+ D+E +
Sbjct: 122 QICKGMEYLGTKR--YIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEFFKVKEP 176
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
+ + +WY P K S DVWS GV+ Y+
Sbjct: 177 GE-----SPIFWYAPESL-----TESKFSVASDVWSFGVVLYELF 211
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 97/228 (42%), Gaps = 25/228 (10%)
Query: 281 NHPVLSDRYL-LLMLLGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKH 337
N +R+L L LGKG F V +D L++ V +L +E +++
Sbjct: 21 NMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE-----HLRD 75
Query: 338 ALREYNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREAR 395
RE I K+L H +VK V + + ++EY L YL++HK I +
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 135
Query: 396 SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPD 455
Q+ ++YL + IH DL NIL+ N +KI DFGL+KV+ ++
Sbjct: 136 QYTSQICKGMEYLGTKR--YIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDK---- 186
Query: 456 HGMDLTSQGAG-TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
+ G +WY P K S DVWS GV+ Y+
Sbjct: 187 EXXKVKEPGESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELF 229
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 124/298 (41%), Gaps = 39/298 (13%)
Query: 228 RNLHIRELKRIHNEDQSRFNNHPVLSDSYLIGYKNLHIRE---LKRIHNEDQSRFNNHP- 283
R+ I+ L ++ + F + P+L D L + L + L R +D+ N+
Sbjct: 57 RHFIIQSLDNLYRLEGEGFPSIPLLIDHLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDL 116
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
VL ++ +G+G F EV + VA K + D KA + L+E
Sbjct: 117 VLGEQ------IGRGNFGEVFSGRLRADNTLVAVK--SCRETLPPDLKAKF----LQEAR 164
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHD-LDFYLKQHKTIAEREARSIVMQVV 402
I K HP +V+L V V+E G D L F + + + +V
Sbjct: 165 ILKQYSHPNIVRLIGVC-TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
+ ++YL IH DL N L+TE NV +KI+DFG+S+ EE G+ S
Sbjct: 224 AGMEYLE--SKCCIHRDLAARNCLVTEKNV---LKISDFGMSR---EEA----DGVXAAS 271
Query: 463 QG---AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQAT 516
G W P N + SS+ DVWS G++ ++ G P+ + +Q T
Sbjct: 272 GGLRQVPVKWTAPE-----ALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 25/224 (11%)
Query: 285 LSDRYL-LLMLLGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
+R+L L LGKG F V +D L++ V +L +E +++ RE
Sbjct: 38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE-----HLRDFERE 92
Query: 342 YNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVM 399
I K+L H +VK V + + ++EY L YL++HK I +
Sbjct: 93 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 152
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q+ ++YL + IH DL NIL+ N +KI DFGL+KV+ ++
Sbjct: 153 QICKGMEYLGTKR--YIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDK----EXXK 203
Query: 460 LTSQGAG-TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
+ G +WY P K S DVWS GV+ Y+
Sbjct: 204 VKEPGESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELF 242
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 25/224 (11%)
Query: 285 LSDRYL-LLMLLGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
+R+L L LGKG F V +D L++ V +L +E +++ RE
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE-----HLRDFERE 64
Query: 342 YNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVM 399
I K+L H +VK V + + ++EY L YL++HK I +
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 124
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q+ ++YL + IH DL NIL+ N +KI DFGL+KV+ ++
Sbjct: 125 QICKGMEYLGTKR--YIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDK----EXXK 175
Query: 460 LTSQGAG-TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
+ G +WY P K S DVWS GV+ Y+
Sbjct: 176 VKEPGESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELF 214
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 25/224 (11%)
Query: 285 LSDRYL-LLMLLGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
+R+L L LGKG F V +D L++ V +L +E +++ RE
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE-----HLRDFERE 61
Query: 342 YNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVM 399
I K+L H +VK V + + ++EY L YL++HK I +
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q+ ++YL + IH DL NIL+ N +KI DFGL+KV+ ++
Sbjct: 122 QICKGMEYLGTKR--YIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDK----EXXK 172
Query: 460 LTSQGAG-TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
+ G +WY P K S DVWS GV+ Y+
Sbjct: 173 VKEPGESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELF 211
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 25/224 (11%)
Query: 285 LSDRYL-LLMLLGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
+R+L L LGKG F V +D L++ V +L +E +++ RE
Sbjct: 6 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE-----HLRDFERE 60
Query: 342 YNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVM 399
I K+L H +VK V + + ++EY L YL++HK I +
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 120
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q+ ++YL + IH DL NIL+ N +KI DFGL+KV+ ++
Sbjct: 121 QICKGMEYLGTKR--YIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDK----EXXK 171
Query: 460 LTSQGAG-TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
+ G +WY P K S DVWS GV+ Y+
Sbjct: 172 VKEPGESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELF 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 25/224 (11%)
Query: 285 LSDRYL-LLMLLGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
+R+L L LGKG F V +D L++ V +L +E +++ RE
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE-----HLRDFERE 61
Query: 342 YNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVM 399
I K+L H +VK V + + ++EY L YL++HK I +
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q+ ++YL + IH DL NIL+ N +KI DFGL+KV+ ++
Sbjct: 122 QICKGMEYLGTKR--YIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDK----EXXK 172
Query: 460 LTSQGAG-TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
+ G +WY P K S DVWS GV+ Y+
Sbjct: 173 VKEPGESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELF 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 25/224 (11%)
Query: 285 LSDRYL-LLMLLGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
+R+L L LGKG F V +D L++ V +L +E +++ RE
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE-----HLRDFERE 59
Query: 342 YNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVM 399
I K+L H +VK V + + ++EY L YL++HK I +
Sbjct: 60 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 119
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q+ ++YL + IH DL NIL+ N +KI DFGL+KV+ ++
Sbjct: 120 QICKGMEYLGTKR--YIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDK----EXXK 170
Query: 460 LTSQGAG-TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
+ G +WY P K S DVWS GV+ Y+
Sbjct: 171 VKEPGESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELF 209
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 25/224 (11%)
Query: 285 LSDRYL-LLMLLGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
+R+L L LGKG F V +D L++ V +L +E +++ RE
Sbjct: 13 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE-----HLRDFERE 67
Query: 342 YNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVM 399
I K+L H +VK V + + ++EY L YL++HK I +
Sbjct: 68 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 127
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q+ ++YL + IH DL NIL+ N +KI DFGL+KV+ ++
Sbjct: 128 QICKGMEYLGTKR--YIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDK----EXXK 178
Query: 460 LTSQGAG-TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
+ G +WY P K S DVWS GV+ Y+
Sbjct: 179 VKEPGESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELF 217
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 25/224 (11%)
Query: 285 LSDRYL-LLMLLGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
+R+L L LGKG F V +D L++ V +L +E +++ RE
Sbjct: 12 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE-----HLRDFERE 66
Query: 342 YNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVM 399
I K+L H +VK V + + ++EY L YL++HK I +
Sbjct: 67 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 126
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q+ ++YL + IH DL NIL+ N +KI DFGL+KV+ ++
Sbjct: 127 QICKGMEYLGTKR--YIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDK----EXXK 177
Query: 460 LTSQGAG-TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
+ G +WY P K S DVWS GV+ Y+
Sbjct: 178 VKEPGESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELF 216
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 25/224 (11%)
Query: 285 LSDRYL-LLMLLGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
+R+L L LGKG F V +D L++ V +L +E +++ RE
Sbjct: 11 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE-----HLRDFERE 65
Query: 342 YNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVM 399
I K+L H +VK V + + ++EY L YL++HK I +
Sbjct: 66 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 125
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q+ ++YL + IH DL NIL+ N +KI DFGL+KV+ ++
Sbjct: 126 QICKGMEYLGTKR--YIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDK----EXXK 176
Query: 460 LTSQGAG-TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
+ G +WY P K S DVWS GV+ Y+
Sbjct: 177 VKEPGESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELF 215
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 27/225 (12%)
Query: 285 LSDRYL-LLMLLGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
+R+L L LGKG F V +D L++ V +L +E +++ RE
Sbjct: 8 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE-----HLRDFERE 62
Query: 342 YNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVM 399
I K+L H +VK V + + ++EY L YL++HK I +
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 122
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHG 457
Q+ ++YL + IH +L NIL+ N +KI DFGL+KV+ D+E Y
Sbjct: 123 QICKGMEYLGTKR--YIHRNLATRNILVENEN---RVKIGDFGLTKVLPQDKEYYKVKEP 177
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
+ + +WY P K S DVWS GV+ Y+
Sbjct: 178 GE-----SPIFWYAPESL-----TESKFSVASDVWSFGVVLYELF 212
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ K L H R+V+LY V + + EY + L +LK I + +
Sbjct: 52 LAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 109
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ + ++ E IH +L+ NIL+++ C KI DFGL++++++ Y
Sbjct: 110 MAAQIAEGMAFIEERN--YIHRNLRAANILVSDTLSC---KIADFGLARLIEDNEYTARE 164
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQA 515
G + + PE G + K DVWS G++ + + +G+ P+ +
Sbjct: 165 GAKFPIK------WTAPEAINYG----TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 214
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
I +N V+ N P E +R C R EDR
Sbjct: 215 VI--QNLERGYRMVRPDNCP---EELYQLMRLCWKERPEDR 250
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 19/162 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCD-GHDLDFYLKQH-KTIAEREARS 396
L+E + K L H ++V+LY V + V+EY G LDF + K + +
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
+ Q+ S + Y+ + +H DL+ NIL+ E VC K+ DFGL++++++
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEXTARQ 173
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
G + + PE + G + + K DVWS G++
Sbjct: 174 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILL 205
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 25/221 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ K L H R+V+LY V + + EY + L +LK I + +
Sbjct: 64 LAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 121
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ + ++ E IH DL+ NIL+++ C KI DFGL++++++
Sbjct: 122 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEXTARE 176
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQA 515
G + + PE G + K DVWS G++ + + +G+ P+ +
Sbjct: 177 GAKFPIK------WTAPEAINYG----TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 226
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
I +N V+ N P E +R C R EDR
Sbjct: 227 VI--QNLERGYRMVRPDNCP---EELYQLMRLCWKERPEDR 262
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 25/221 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ K L H R+V+LY V + + EY + L +LK I + +
Sbjct: 62 LAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ + ++ E IH DL+ NIL+++ C KI DFGL++++++
Sbjct: 120 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEXTARE 174
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQA 515
G + + PE G + K DVWS G++ + + +G+ P+ +
Sbjct: 175 GAKFPIK------WTAPEAINYG----TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 224
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
I +N V+ N P E +R C R EDR
Sbjct: 225 VI--QNLERGYRMVRPDNCP---EELYQLMRLCWKERPEDR 260
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 31/268 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 83 CRLLGICLTSTVQLITQL-MPFGCLLD-YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 141 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 183
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPFGHNQSQATILEENTILKATE 528
+P + + +I + + DVWS GV ++ + +G KP+ + E ++IL+ E
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EISSILEKGE 239
Query: 529 VQFANKPTVSNEAKGFIRSCLAYRKEDR 556
+ P + + +R C + R
Sbjct: 240 -RLPQPPICTIDVYMIMRKCWMIDADSR 266
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 25/221 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ K L H R+V+LY V + + EY + L +LK I + +
Sbjct: 65 LAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 122
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ + ++ E IH DL+ NIL+++ C KI DFGL++++++
Sbjct: 123 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEXTARE 177
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQA 515
G + + PE G + K DVWS G++ + + +G+ P+ +
Sbjct: 178 GAKFPIK------WTAPEAINYG----TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 227
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
I +N V+ N P E +R C R EDR
Sbjct: 228 VI--QNLERGYRMVRPDNCP---EELYQLMRLCWKERPEDR 263
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 25/221 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ K L H R+V+LY V + + EY + L +LK I + +
Sbjct: 56 LAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ + ++ E IH DL+ NIL+++ C KI DFGL++++++
Sbjct: 114 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSC---KIADFGLARLIEDAEXTARE 168
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQA 515
G + + PE G + K DVWS G++ + + +G+ P+ +
Sbjct: 169 GAKFPIK------WTAPEAINYG----TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 218
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
I +N V+ N P E +R C R EDR
Sbjct: 219 VI--QNLERGYRMVRPDNCP---EELYQLMRLCWKERPEDR 254
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V V + KAN K L E + ++D+P V
Sbjct: 56 VLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKAN--KEILDEAYVMASVDNPHV 113
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 114 CRLLGICLTSTVQLITQL-MPFGCLLD-YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 171
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 172 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 214
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 215 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 254
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 25/221 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ K L H R+V+LY V + + EY + L +LK I + +
Sbjct: 56 LAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ + ++ E IH DL+ NIL+++ C KI DFGL++++++
Sbjct: 114 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEXTARE 168
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQA 515
G + + PE G + K DVWS G++ + + +G+ P+ +
Sbjct: 169 GAKFPIK------WTAPEAINYG----TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 218
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
I +N V+ N P E +R C R EDR
Sbjct: 219 VI--QNLERGYRMVRPDNCP---EELYQLMRLCWKERPEDR 254
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 31/268 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 89
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 90 CRLLGICLTSTVQLITQL-MPFGCLLD-YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 147
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 148 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 190
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPFGHNQSQATILEENTILKATE 528
+P + + +I + + DVWS GV ++ + +G KP+ + E ++IL+ E
Sbjct: 191 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EISSILEKGE 246
Query: 529 VQFANKPTVSNEAKGFIRSCLAYRKEDR 556
+ P + + +R C + R
Sbjct: 247 -RLPQPPICTIDVYMIMRKCWMIDADSR 273
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 25/224 (11%)
Query: 285 LSDRYL-LLMLLGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
+R+L L LGKG F V +D L++ V +L +E +++ RE
Sbjct: 10 FEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE-----HLRDFERE 64
Query: 342 YNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVM 399
I K+L H +VK V + + ++E+ L YL++HK I +
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTS 124
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q+ ++YL + IH DL NIL+ N +KI DFGL+KV+ ++
Sbjct: 125 QICKGMEYLGTKR--YIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDK----EXXK 175
Query: 460 LTSQGAG-TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
+ G +WY P K S DVWS GV+ Y+
Sbjct: 176 VKEPGESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELF 214
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 21/157 (13%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
+ + RY ++ LG G FS V ++D++ +++VA KV + +Y + AL E
Sbjct: 34 LFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK--------SAEHYTETALDEIR 85
Query: 344 IHKAL--------DHPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQ-HKTIAE 391
+ K++ + VV+L D F+I + C V E H L + +K ++ +
Sbjct: 86 LLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPL 145
Query: 392 REARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLT 428
+ I+ QV+ L YL+ K +IH D+KP NILL+
Sbjct: 146 PCVKKIIQQVLQGLDYLH-TKCRIIHTDIKPENILLS 181
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 27/216 (12%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG+G F EVH+ D +Q C V KK E L PR+V
Sbjct: 82 LGRGSFGEVHRMED--KQTGFQCAV----------KKVRLEVFRAEELMACAGLTSPRIV 129
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
LY + +E +G L +K+ + E A + Q + L+YL+ +
Sbjct: 130 PLYGAVR-EGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR-- 186
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG--AGTYWYLP 472
++H D+K N+LL+ + DFG + + + G DL + GT ++
Sbjct: 187 ILHGDVKADNVLLSSDG--SHAALCDFGHAVCLQPDGL----GKDLLTGDYIPGTETHMA 240
Query: 473 PECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
PE V+G++ +KVDVWS + L G P+
Sbjct: 241 PE-VVLGRS---CDAKVDVWSSCCMMLHMLNGCHPW 272
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 25/221 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ K L H R+V+LY V + + EY + L +LK I + +
Sbjct: 58 LAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 115
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ + ++ E IH DL+ NIL+++ C KI DFGL++++++
Sbjct: 116 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEXTARE 170
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQA 515
G + + PE G + K DVWS G++ + + +G+ P+ +
Sbjct: 171 GAKFPIK------WTAPEAINYG----TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 220
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
I +N V+ N P E +R C R EDR
Sbjct: 221 VI--QNLERGYRMVRPDNCP---EELYQLMRLCWKERPEDR 256
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 28/254 (11%)
Query: 258 IGYKNLHIRELKRIHNEDQSRFNNHPVLSDRYLLL---MLLGKGGFSEVHKAFDLKEQRY 314
+G +NL+ + H + ++ D LLL + +G+G V A + R
Sbjct: 13 LGTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQ 72
Query: 315 VACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYC 374
VA K+ L K + + N E I + H VV++Y + + ++E+
Sbjct: 73 VAVKMMDLRKQQRRELLFN-------EVVIMRDYQHFNVVEMYKSYLV-GEELWVLMEFL 124
Query: 375 DGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG 434
G L + Q + + E + ++ V+ AL YL+ VIH D+K +ILLT + G
Sbjct: 125 QGGALTDIVSQVR-LNEEQIATVCEAVLQALAYLH--AQGVIHRDIKSDSILLT---LDG 178
Query: 435 EIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSV 494
+K++DFG + ++ P GT +++ PE V+ ++ +++VD+WS+
Sbjct: 179 RVKLSDFGFCAQISKDV--PKR-----KXLVGTPYWMAPE--VISRS--LYATEVDIWSL 227
Query: 495 GVIFYQCLYGKKPF 508
G++ + + G+ P+
Sbjct: 228 GIMVIEMVDGEPPY 241
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 31/268 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 80 CRLLGICLTSTVQLITQL-MPFGCLLD-YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 138 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 180
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPFGHNQSQATILEENTILKATE 528
+P + + +I + + DVWS GV ++ + +G KP+ + E ++IL+ E
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EISSILEKGE 236
Query: 529 VQFANKPTVSNEAKGFIRSCLAYRKEDR 556
+ P + + +R C + R
Sbjct: 237 -RLPQPPICTIDVYMIMRKCWMIDADSR 263
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 25/221 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ K L H R+V+LY V + + EY + L +LK I + +
Sbjct: 57 LAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 114
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ + ++ E IH DL+ NIL+++ C KI DFGL++++++
Sbjct: 115 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEXTARE 169
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQA 515
G + + PE G + K DVWS G++ + + +G+ P+ +
Sbjct: 170 GAKFPIK------WTAPEAINYG----TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 219
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
I +N V+ N P E +R C R EDR
Sbjct: 220 VI--QNLERGYRMVRPDNCP---EELYQLMRLCWKERPEDR 255
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L+E + K L H ++V+LY V + V EY L +LK R + +
Sbjct: 51 LQEAQVMKKLRHEKLVQLYAV--VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 108
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ S + Y+ + +H DL+ NIL+ E VC K+ DFGL++++++
Sbjct: 109 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEXTARQ 163
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
G + + PE + G + + K DVWS G++
Sbjct: 164 GAKFPIK------WTAPEAALYG----RFTIKSDVWSFGILL 195
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 30/226 (13%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y L+ LG+G +SEV +A ++ V K+ + K N IK RE I +
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKI-------LKPVKKNKIK---REIKILE 86
Query: 347 AL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-HKTIAEREARSIVMQVVSA 404
L P ++ L D+ + D S L + ++ DF KQ ++T+ + + R + +++ A
Sbjct: 87 NLRGGPNIITLADIVK-DPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKA 143
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
L Y + + ++H D+KP N+++ + ++++ D+GL+ E Y+P G + +
Sbjct: 144 LDYCHSMG--IMHRDVKPHNVMIDHEH--RKLRLIDWGLA-----EFYHP--GQEYNVRV 192
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGH 510
A Y + PE V + +D+WS+G + ++ K+PF H
Sbjct: 193 ASRY-FKGPELLV---DYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 25/221 (11%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
L E N+ K L H R+V+LY V + + EY + L +LK I + +
Sbjct: 56 LAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 399 M--QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
M Q+ + ++ E IH DL+ NIL+++ C KI DFGL++++++
Sbjct: 114 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEXTARE 168
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQA 515
G + + PE G + K DVWS G++ + + +G+ P+ +
Sbjct: 169 GAKFPIK------WTAPEAINYG----TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 218
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
I +N V+ N P E +R C R EDR
Sbjct: 219 VI--QNLERGYRMVRPDNCP---EELYQLMRLCWKERPEDR 254
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 21/157 (13%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
+ + RY ++ LG G FS V ++D++ +++VA KV + +Y + AL E
Sbjct: 18 LFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK--------SAEHYTETALDEIR 69
Query: 344 IHKAL--------DHPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQ-HKTIAE 391
+ K++ + VV+L D F+I + C V E H L + +K ++ +
Sbjct: 70 LLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPL 129
Query: 392 REARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLT 428
+ I+ QV+ L YL+ K +IH D+KP NILL+
Sbjct: 130 PCVKKIIQQVLQGLDYLH-TKCRIIHTDIKPENILLS 165
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 113/280 (40%), Gaps = 26/280 (9%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI-HKALDHPRV 353
+G+G + V+K + +A K + D KE K+ L + ++ ++ D P +
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQL------LMDLDVVMRSSDCPYI 83
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSALKYLNE 410
V+ Y + + + + D + Y I E I + V AL +L E
Sbjct: 84 VQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE 143
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
+IH D+KP NILL G IK+ DFG+S + + ++ AG Y
Sbjct: 144 -NLKIIHRDIKPSNILLDRS---GNIKLCDFGISGQLVDSIAK--------TRDAGCRPY 191
Query: 471 LPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQ 530
+ PE + + DVWS+G+ Y+ G+ P+ S L + ++K Q
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQ--VVKGDPPQ 249
Query: 531 FANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
+N S F+ CL + R L +H ++
Sbjct: 250 LSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 112/290 (38%), Gaps = 26/290 (8%)
Query: 291 LLMLLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LL LG G F V + +D + V+ V L D +A + +RE N +LD
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA--MDDFIREVNAMHSLD 79
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
H +++LY V T L G LD K +QV + YL
Sbjct: 80 HRNLIRLYGVVLTPPMKMVTELAPL-GSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
+ IH DL N+LL ++ +KI DFGL + + + N DH + + W
Sbjct: 139 SKR--FIHRDLAARNLLLATRDL---VKIGDFGLMRALPQ---NDDHXVMQEHRKVPFAW 190
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF-GHNQSQATILEENTILKAT 527
P S D W GV ++ YG++P+ G N SQ + I K
Sbjct: 191 CAPESL-----KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL----HKIDKEG 241
Query: 528 EVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKHGR 577
E + + + C A++ EDR ++L D+L P R
Sbjct: 242 E-RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL--RDFLLEAQPTDMR 288
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + + V K+ K +E+ K L E + + P V
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENV--KIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 354 VKLYDVFEIDANSFCT-VLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIK 412
+L + T ++ Y G LD + + ++ + MQ+ + YL +++
Sbjct: 82 SRLLGICLTSTVQLVTQLMPY--GCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVR 139
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHG------MDLTSQG 464
++H DL N+L+ N +KITDFGL++++ DE Y+ D G M L S
Sbjct: 140 --LVHRDLAARNVLVKSPN---HVKITDFGLARLLDIDETEYHADGGKVPIKWMALES-- 192
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
++ + + + + DVWS GV ++ + +G KP+
Sbjct: 193 ------------ILRR---RFTHQSDVWSYGVTVWELMTFGAKPY 222
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 95/224 (42%), Gaps = 25/224 (11%)
Query: 285 LSDRYL-LLMLLGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
+R+L L LGKG F V +D L++ V +L +E +++ RE
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE-----HLRDFERE 64
Query: 342 YNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQH-KTIAEREARSIVM 399
I K+L H +VK V + + ++EY L YL+ H + I +
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTS 124
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q+ ++YL + IH DL NIL+ N +KI DFGL+KV+ ++
Sbjct: 125 QICKGMEYLGTKR--YIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDK----EXXK 175
Query: 460 LTSQGAG-TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
+ G +WY P K S DVWS GV+ Y+
Sbjct: 176 VKEPGESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELF 214
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 17/142 (11%)
Query: 371 LEYCDGHDLDFYLKQHKTIAERE---ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILL 427
++ C +L ++ + ++ +RE I +Q+ A+++L+ ++H DLKP NI
Sbjct: 140 MQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH--SKGLMHRDLKPSNIFF 197
Query: 428 TEGNVCGEIKITDFGLSKVMDEEN-----YNPDHGMDLTSQGAGTYWYLPPECFVVGKNP 482
T +V +K+ DFGL MD++ P GT Y+ PE + G N
Sbjct: 198 TMDDV---VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQ-IHGNN- 252
Query: 483 PKISSKVDVWSVGVIFYQCLYG 504
S KVD++S+G+I ++ LY
Sbjct: 253 --YSHKVDIFSLGLILFELLYS 272
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 80 CRLLGICLTSTVQLITQL-MPFGXLLD-YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 138 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 180
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 101/236 (42%), Gaps = 44/236 (18%)
Query: 295 LGKGGFSEVHKA--FDL---KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LG+G F +V A ++L K++ VA K +D K RE + L
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKA-------LKDPTLAARKDFQREAELLTNLQ 75
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE-------REARS------ 396
H +VK Y V D + V EY DL+ +L+ H A R+A+
Sbjct: 76 HEHIVKFYGVCG-DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 397 ---IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
I Q+ S + YL +H DL N L+ + +KI DFG+S+ + +Y
Sbjct: 135 MLHIASQIASGMVYLAS--QHFVHRDLATRNCLVGANLL---VKIGDFGMSRDVYSTDYY 189
Query: 454 PDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
G + ++PPE + K +++ DVWS GVI ++ YGK+P+
Sbjct: 190 RVGGHTMLPIR-----WMPPESIMY----RKFTTESDVWSFGVILWEIFTYGKQPW 236
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 87 CRLLGICLTSTVQLITQL-MPFGCLLD-YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 145 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 187
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 28 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 85
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 86 CRLLGICLTSTVQLITQL-MPFGCLLD-YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 143
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 144 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 186
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 187 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 226
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 83 CRLLGICLTSTVQLITQL-MPFGCLLD-YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 141 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 183
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 82 CRLLGICLTSTVQLITQL-MPFGCLLD-YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 140 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 182
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 83 CRLLGICLTSTVQLITQL-MPFGCLLD-YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 141 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 183
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 89/223 (39%), Gaps = 41/223 (18%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG+G F EVH+ D +Q C V KK + E L PR+V
Sbjct: 80 LGRGSFGEVHRMKD--KQTGFQCAV----------KKVRLEVFRVEELVACAGLSSPRIV 127
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
LY + +E +G L +KQ + E A + Q + L+YL+ +
Sbjct: 128 PLYGAVR-EGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR-- 184
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDF---------GLSKVMDEENYNPDHGMDLTSQGA 465
++H D+K N+LL+ + DF GL K + +Y P
Sbjct: 185 ILHGDVKADNVLLSSDG--SRAALCDFGHALCLQPDGLGKSLLTGDYIP----------- 231
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
GT ++ PE V+GK +KVD+WS + L G P+
Sbjct: 232 GTETHMAPE-VVMGK---PCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 89/223 (39%), Gaps = 41/223 (18%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG+G F EVH+ D +Q C V KK E L PR+V
Sbjct: 101 LGRGSFGEVHRMED--KQTGFQCAV----------KKVRLEVFRAEELMACAGLTSPRIV 148
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
LY + +E +G L +K+ + E A + Q + L+YL+ +
Sbjct: 149 PLYGAVR-EGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR-- 205
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDF---------GLSKVMDEENYNPDHGMDLTSQGA 465
++H D+K N+LL+ + DF GL K + +Y P
Sbjct: 206 ILHGDVKADNVLLSSDG--SHAALCDFGHAVCLQPDGLGKSLLTGDYIP----------- 252
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
GT ++ PE V+G++ +KVDVWS + L G P+
Sbjct: 253 GTETHMAPE-VVLGRS---CDAKVDVWSSCCMMLHMLNGCHPW 291
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 80 CRLLGICLTSTVQLITQL-MPFGCLLD-YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 138 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 180
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 104
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 105 CRLLGICLTSTVQLITQL-MPFGCLLD-YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 162
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 163 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 205
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 206 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 245
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 112/290 (38%), Gaps = 26/290 (8%)
Query: 291 LLMLLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LL LG G F V + +D + V+ V L D +A + +RE N +LD
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA--MDDFIREVNAMHSLD 79
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
H +++LY V T L G LD K +QV + YL
Sbjct: 80 HRNLIRLYGVVLTPPMKMVTELAPL-GSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
+ IH DL N+LL ++ +KI DFGL + + + N DH + + W
Sbjct: 139 SKR--FIHRDLAARNLLLATRDL---VKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAW 190
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF-GHNQSQATILEENTILKAT 527
P S D W GV ++ YG++P+ G N SQ + I K
Sbjct: 191 CAPESL-----KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL----HKIDKEG 241
Query: 528 EVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKHGR 577
E + + + C A++ EDR ++L D+L P R
Sbjct: 242 E-RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL--RDFLLEAQPTDMR 288
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 36/229 (15%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D +R VA K +L++ ++ A K A RE + K
Sbjct: 25 RYQNLKPIGSGAQGIVVAAYDAILERNVAIK--KLSRPFQNQTHA---KRAYRELVLMKV 79
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD---ATLKILDFGLART------------------A 176
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIFYQCLYGKKPF 508
GT + + P P++ VD+WSVGVI + + G F
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 36/229 (15%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D +R VA K +L++ ++ A K A RE + K
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHA---KRAYRELVLMKV 79
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD---ATLKILDFGLART------------------A 176
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIFYQCLYGKKPF 508
GT + + P P++ VD+WSVGVI + + G F
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 110/281 (39%), Gaps = 26/281 (9%)
Query: 291 LLMLLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LL LG G F V + +D + V+ V L D +A + +RE N +LD
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA--MDDFIREVNAMHSLD 69
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
H +++LY V T L G LD K +QV + YL
Sbjct: 70 HRNLIRLYGVVLTPPMKMVTELAPL-GSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
+ IH DL N+LL ++ +KI DFGL + + + N DH + + W
Sbjct: 129 SKR--FIHRDLAARNLLLATRDL---VKIGDFGLMRALPQ---NDDHXVMQEHRKVPFAW 180
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF-GHNQSQATILEENTILKAT 527
P S D W GV ++ YG++P+ G N SQ + I K
Sbjct: 181 CAPESL-----KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL----HKIDKEG 231
Query: 528 EVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
E + + + C A++ EDR ++L D+L
Sbjct: 232 E-RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL--RDFL 269
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 19 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 76
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 77 CRLLGICLTSTVQLITQL-MPFGCLLD-YVREHKDNIGSQYLLNWCVQIAEGMNYLEDRR 134
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 135 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 177
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 178 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 217
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 114/290 (39%), Gaps = 26/290 (8%)
Query: 291 LLMLLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LL LG G F V + +D + V+ V L D +A + +RE N +LD
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA--MDDFIREVNAMHSLD 73
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
H +++LY V T L G LD K +QV + YL
Sbjct: 74 HRNLIRLYGVVLTPPMKMVTELAPL-GSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
+ IH DL N+LL ++ +KI DFGL + + + N DH + + W
Sbjct: 133 SKR--FIHRDLAARNLLLATRDL---VKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAW 184
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF-GHNQSQATILEENTILKAT 527
P S D W GV ++ YG++P+ G N SQ IL + I K
Sbjct: 185 CAPESL-----KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ--ILHK--IDKEG 235
Query: 528 EVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKHGR 577
E + + + C A++ EDR ++L D+L P R
Sbjct: 236 E-RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL--RDFLLEAQPTDMR 282
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 132/316 (41%), Gaps = 46/316 (14%)
Query: 279 FNNHPVLSD--RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIK 336
F H V+ D YL + LG+GGFS V L + + A K ++ ++D++
Sbjct: 19 FQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE--QQDRE----- 71
Query: 337 HALREYNIHKALDHPRVVKL--YDVFEIDANSFCTVLEYCDGHDLDFYLK---------- 384
A RE ++H+ +HP +++L Y + E A +L L F+ +
Sbjct: 72 EAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL-------LPFFKRGTLWNEIERL 124
Query: 385 --QHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFG 442
+ + E + +++ + L+ ++ H DLKP NILL + G+ + D G
Sbjct: 125 KDKGNFLTEDQILWLLLGICRGLEAIH--AKGYAHRDLKPTNILLGDE---GQPVLMDLG 179
Query: 443 LSKVMDEENYNPDHGMDLTSQGA--GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQ 500
+ L A T Y PE F V ++ I + DVWS+G + Y
Sbjct: 180 SMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSV-QSHCVIDERTDVWSLGCVLYA 238
Query: 501 CLYGKKPFGHNQSQATILEENTILKATEVQFA--NKPTVSNEAKGFIRSCLAYRKEDRID 558
++G+ P+ + +++ A + Q + P S+ + S + R
Sbjct: 239 MMFGEGPY-----DMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPH 293
Query: 559 V-ISLARHDYLQPPVP 573
+ + L++ + LQPP P
Sbjct: 294 IPLLLSQLEALQPPAP 309
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 113/259 (43%), Gaps = 32/259 (12%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V AFD VA K +L++ ++ A K A RE + K
Sbjct: 23 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHA---KRAYRELVLLKC 77
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + H + ++ Q++ +
Sbjct: 78 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGI 137
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ C +KI DFGL++ N+ + +
Sbjct: 138 KHLH--SAGIIHRDLKPSNIVVKSD--C-TLKILDFGLARTAS-TNF-------MMTPYV 184
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
T +Y PE ++G VD+WSVG I + + G F Q I + N +++
Sbjct: 185 VTRYYRAPEV-ILGMG---YKENVDIWSVGCIMGELVKGSVIF---QGTDHIDQWNKVIE 237
Query: 526 -----ATEVQFANKPTVSN 539
+ E A +PTV N
Sbjct: 238 QLGTPSAEFMAALQPTVRN 256
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 73
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 74 CRLLGICLTSTVQLITQL-MPFGCLLD-YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 131
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 132 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 174
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 175 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 214
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 35/242 (14%)
Query: 272 HNEDQSRFNN--HPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDW-KE 328
+++DQ + H ++ RY +L ++GKG F +V KA+D K ++VA K+ + K + ++
Sbjct: 80 YDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ 139
Query: 329 DKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK- 387
+ I LR+ + ++ V+ + + F N C E +L +K++K
Sbjct: 140 AAEEIRILEHLRKQDKDNTMN---VIHMLENFTF-RNHICMTFELLS-MNLYELIKKNKF 194
Query: 388 -----TIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFG 442
+ + A SI +Q + AL K +IH DLKP NILL + G IK+ DFG
Sbjct: 195 QGFSLPLVRKFAHSI-LQCLDALH-----KNRIIHCDLKPENILLKQQGRSG-IKVIDFG 247
Query: 443 LSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
S + Y + +Y PE ++G + +D+WS+G I + L
Sbjct: 248 SSCYEHQRVYTXIQ----------SRFYRAPEV-ILGA---RYGMPIDMWSLGCILAELL 293
Query: 503 YG 504
G
Sbjct: 294 TG 295
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 36/229 (15%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D +R VA K +L++ ++ A K A RE + K
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 79
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ C +KI DFGL++ A
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD--C-TLKILDFGLART------------------A 176
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIFYQCLYGKKPF 508
GT + + PE P++ VD+WSVG I + + G F
Sbjct: 177 GTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 118/268 (44%), Gaps = 31/268 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 82 CRLLGICLTSTVQLITQL-MPFGCLLD-YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFG +K++ +E+ Y+ + G
Sbjct: 140 --LVHRDLAARNVLVKTPQ---HVKITDFGRAKLLGAEEKEYHAEGGK------------ 182
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPFGHNQSQATILEENTILKATE 528
+P + + +I + + DVWS GV ++ + +G KP+ + E ++IL+ E
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EISSILEKGE 238
Query: 529 VQFANKPTVSNEAKGFIRSCLAYRKEDR 556
+ P + + +R C + R
Sbjct: 239 -RLPQPPICTIDVYMIMRKCWMIDADSR 265
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 89/223 (39%), Gaps = 41/223 (18%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G F EVH+ D +Q C V KK + E L PR+V
Sbjct: 66 VGRGSFGEVHRMKD--KQTGFQCAV----------KKVRLEVFRVEELVACAGLSSPRIV 113
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
LY + +E +G L +KQ + E A + Q + L+YL+ +
Sbjct: 114 PLYGAVR-EGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR-- 170
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDF---------GLSKVMDEENYNPDHGMDLTSQGA 465
++H D+K N+LL+ + DF GL K + +Y P
Sbjct: 171 ILHGDVKADNVLLSSDG--SRAALCDFGHALCLQPDGLGKSLLTGDYIP----------- 217
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
GT ++ PE V+GK +KVD+WS + L G P+
Sbjct: 218 GTETHMAPE-VVMGK---PCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 35/242 (14%)
Query: 272 HNEDQSRFNN--HPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDW-KE 328
+++DQ + H ++ RY +L ++GKG F +V KA+D K ++VA K+ + K + ++
Sbjct: 80 YDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ 139
Query: 329 DKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK- 387
+ I LR+ + ++ V+ + + F N C E +L +K++K
Sbjct: 140 AAEEIRILEHLRKQDKDNTMN---VIHMLENFTF-RNHICMTFELLS-MNLYELIKKNKF 194
Query: 388 -----TIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFG 442
+ + A SI +Q + AL K +IH DLKP NILL + G IK+ DFG
Sbjct: 195 QGFSLPLVRKFAHSI-LQCLDALH-----KNRIIHCDLKPENILLKQQGRSG-IKVIDFG 247
Query: 443 LSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
S + Y + +Y PE ++G + +D+WS+G I + L
Sbjct: 248 SSCYEHQRVYTXIQ----------SRFYRAPEV-ILGA---RYGMPIDMWSLGCILAELL 293
Query: 503 YG 504
G
Sbjct: 294 TG 295
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 80
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + ++ +++ L Y+++HK I + + +Q+ + YL + +
Sbjct: 81 CRLLGI--CLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 138
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 139 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 181
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 110/281 (39%), Gaps = 26/281 (9%)
Query: 291 LLMLLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LL LG G F V + +D + V+ V L D +A + +RE N +LD
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA--MDDFIREVNAMHSLD 73
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
H +++LY V T L G LD K +QV + YL
Sbjct: 74 HRNLIRLYGVVLTPPMKMVTELAPL-GSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
+ IH DL N+LL ++ +KI DFGL + + + N DH + + W
Sbjct: 133 SKR--FIHRDLAARNLLLATRDL---VKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAW 184
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF-GHNQSQATILEENTILKAT 527
P S D W GV ++ YG++P+ G N SQ + I K
Sbjct: 185 CAPESL-----KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL----HKIDKEG 235
Query: 528 EVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
E + + + C A++ EDR ++L D+L
Sbjct: 236 E-RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL--RDFL 273
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 89/223 (39%), Gaps = 41/223 (18%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G F EVH+ D +Q C V KK + E L PR+V
Sbjct: 82 VGRGSFGEVHRMKD--KQTGFQCAV----------KKVRLEVFRVEELVACAGLSSPRIV 129
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP 414
LY + +E +G L +KQ + E A + Q + L+YL+ +
Sbjct: 130 PLYGAVR-EGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR-- 186
Query: 415 VIHYDLKPGNILLTEGNVCGEIKITDF---------GLSKVMDEENYNPDHGMDLTSQGA 465
++H D+K N+LL+ + DF GL K + +Y P
Sbjct: 187 ILHGDVKADNVLLSSDG--SRAALCDFGHALCLQPDGLGKSLLTGDYIP----------- 233
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
GT ++ PE V+GK +KVD+WS + L G P+
Sbjct: 234 GTETHMAPE-VVMGK---PCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 110/281 (39%), Gaps = 26/281 (9%)
Query: 291 LLMLLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LL LG G F V + +D + V+ V L D +A + +RE N +LD
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA--MDDFIREVNAMHSLD 69
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
H +++LY V T L G LD K +QV + YL
Sbjct: 70 HRNLIRLYGVVLTPPMKMVTELAPL-GSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
+ IH DL N+LL ++ +KI DFGL + + + N DH + + W
Sbjct: 129 SKR--FIHRDLAARNLLLATRDL---VKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAW 180
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF-GHNQSQATILEENTILKAT 527
P S D W GV ++ YG++P+ G N SQ + I K
Sbjct: 181 CAPESL-----KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL----HKIDKEG 231
Query: 528 EVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
E + + + C A++ EDR ++L D+L
Sbjct: 232 E-RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL--RDFL 269
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 103/252 (40%), Gaps = 27/252 (10%)
Query: 324 KDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDA-NSFCTVLEYCDGHDLDFY 382
K K + N+I +E I + L H +VK + D N ++E+ L Y
Sbjct: 56 KSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEY 115
Query: 383 LKQHKT-IAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDF 441
L ++K I ++ +Q+ + YL + +H DL N+L+ + ++KI DF
Sbjct: 116 LPKNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEH---QVKIGDF 170
Query: 442 GLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQC 501
GL+K ++ + D S +WY PEC + K I+S DVWS GV ++
Sbjct: 171 GLTKAIETDKEXXTVKDDRDSP---VFWY-APECLMQSKF--YIAS--DVWSFGVTLHEL 222
Query: 502 L-----------YGKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLA 550
L K G Q T+ LK + + P +E +R C
Sbjct: 223 LTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK-RLPCPPNCPDEVYQLMRKCWE 281
Query: 551 YRKEDRIDVISL 562
++ +R +L
Sbjct: 282 FQPSNRTSFQNL 293
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 110/281 (39%), Gaps = 26/281 (9%)
Query: 291 LLMLLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LL LG G F V + +D + V+ V L D +A + +RE N +LD
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA--MDDFIREVNAMHSLD 69
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
H +++LY V T L G LD K +QV + YL
Sbjct: 70 HRNLIRLYGVVLTPPMKMVTELAPL-GSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
+ IH DL N+LL ++ +KI DFGL + + + N DH + + W
Sbjct: 129 SKR--FIHRDLAARNLLLATRDL---VKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAW 180
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF-GHNQSQATILEENTILKAT 527
P S D W GV ++ YG++P+ G N SQ + I K
Sbjct: 181 CAPESL-----KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL----HKIDKEG 231
Query: 528 EVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYL 568
E + + + C A++ EDR ++L D+L
Sbjct: 232 E-RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL--RDFL 269
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 35/242 (14%)
Query: 272 HNEDQSRFNN--HPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDW-KE 328
+++DQ + H ++ RY +L ++GKG F +V KA+D K ++VA K+ + K + ++
Sbjct: 80 YDDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ 139
Query: 329 DKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK- 387
+ I LR+ + ++ V+ + + F N C E +L +K++K
Sbjct: 140 AAEEIRILEHLRKQDKDNTMN---VIHMLENFTF-RNHICMTFELLS-MNLYELIKKNKF 194
Query: 388 -----TIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFG 442
+ + A SI +Q + AL K +IH DLKP NILL + G IK+ DFG
Sbjct: 195 QGFSLPLVRKFAHSI-LQCLDALH-----KNRIIHCDLKPENILLKQQGRSG-IKVIDFG 247
Query: 443 LSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
S + Y + +Y PE ++G + +D+WS+G I + L
Sbjct: 248 SSCYEHQRVYXXIQ----------SRFYRAPEV-ILGA---RYGMPIDMWSLGCILAELL 293
Query: 503 YG 504
G
Sbjct: 294 TG 295
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 32/259 (12%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V AFD VA K +L++ ++ A K A RE + K
Sbjct: 25 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHA---KRAYRELVLLKC 79
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + H + ++ Q++ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGI 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ N+ + +
Sbjct: 140 KHLH--SAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAC-TNF-------MMTPYV 186
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
T +Y PE ++G ++ VD+WSVG I + + G F Q I + N +++
Sbjct: 187 VTRYYRAPE-VILGMG---YAANVDIWSVGCIMGELVKGCVIF---QGTDHIDQWNKVIE 239
Query: 526 -----ATEVQFANKPTVSN 539
+ E A +PTV N
Sbjct: 240 QLGTPSAEFMAALQPTVRN 258
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 83
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + ++ +++ L Y+++HK I + + +Q+ + YL + +
Sbjct: 84 CRLLGI--CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 141
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 142 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 184
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + ++ +++ L Y+++HK I + + +Q+ + YL + +
Sbjct: 83 CRLLGI--CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 141 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 183
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + ++ +++ L Y+++HK I + + +Q+ + YL + +
Sbjct: 82 CRLLGI--CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 140 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 182
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 80
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + ++ +++ L Y+++HK I + + +Q+ + YL + +
Sbjct: 81 CRLLGI--CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 138
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 139 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 181
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 103/252 (40%), Gaps = 27/252 (10%)
Query: 324 KDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDA-NSFCTVLEYCDGHDLDFY 382
K K + N+I +E I + L H +VK + D N ++E+ L Y
Sbjct: 44 KSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEY 103
Query: 383 LKQHKT-IAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDF 441
L ++K I ++ +Q+ + YL + +H DL N+L+ + ++KI DF
Sbjct: 104 LPKNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEH---QVKIGDF 158
Query: 442 GLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQC 501
GL+K ++ + D S +WY PEC + K I+S DVWS GV ++
Sbjct: 159 GLTKAIETDKEXXTVKDDRDSP---VFWY-APECLMQSKF--YIAS--DVWSFGVTLHEL 210
Query: 502 L-----------YGKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLA 550
L K G Q T+ LK + + P +E +R C
Sbjct: 211 LTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK-RLPCPPNCPDEVYQLMRKCWE 269
Query: 551 YRKEDRIDVISL 562
++ +R +L
Sbjct: 270 FQPSNRTSFQNL 281
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 16/171 (9%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
+ E + L H ++V+LY V F +G L++ + ++ +
Sbjct: 52 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 111
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGM 458
V A++YL +H DL N L+ + V +K++DFGLS+ + ++ Y G
Sbjct: 112 KDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGV---VKVSDFGLSRYVLDDEYTSSRGS 166
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
+ + PPE + K SSK D+W+ GV+ ++ GK P+
Sbjct: 167 KFPVRWS------PPEVLMYS----KFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + ++ +++ L Y+++HK I + + +Q+ + YL + +
Sbjct: 80 CRLLGI--CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 138 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 180
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 367 FCTVLEYCDGHDLDFYLKQHKTIAER-EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNI 425
V ++C+G L +L +T E + I Q + YL+ +IH DLK NI
Sbjct: 105 LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA--KSIIHRDLKSNNI 162
Query: 426 LLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECF-VVGKNPPK 484
L E +KI DFGL+ V + ++ H + Q +G+ ++ PE + KNP
Sbjct: 163 FLHEDLT---VKIGDFGLATV--KSRWSGSHQFE---QLSGSILWMAPEVIRMQDKNPYS 214
Query: 485 ISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
S DV++ G++ Y+ + G+ P+ + ++ I+
Sbjct: 215 FQS--DVYAFGIVLYELMTGQLPYSNINNRDQII 246
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 102/237 (43%), Gaps = 23/237 (9%)
Query: 276 QSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYI 335
Q N V +D + LG+G + V K + + A K + + +E K+
Sbjct: 23 QGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRL--- 79
Query: 336 KHALREYNIH-KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFY---LKQHKTIAE 391
L + +I + +D P V Y + + + E D FY + + +TI E
Sbjct: 80 ---LXDLDISXRTVDCPFTVTFYGALFREGDVW-ICXELXDTSLDKFYKQVIDKGQTIPE 135
Query: 392 REARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEEN 451
I + +V AL++L+ K VIH D+KP N+L+ N G++K DFG+S + +
Sbjct: 136 DILGKIAVSIVKALEHLHS-KLSVIHRDVKPSNVLI---NALGQVKXCDFGISGYLVD-- 189
Query: 452 YNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
D D+ AG Y PE N S K D+WS+G+ + + P+
Sbjct: 190 ---DVAKDI---DAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPY 240
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 367 FCTVLEYCDGHDLDFYLKQHKTIAER-EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNI 425
V ++C+G L +L +T E + I Q + YL+ +IH DLK NI
Sbjct: 106 LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA--KSIIHRDLKSNNI 163
Query: 426 LLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECF-VVGKNPPK 484
L E +KI DFGL+ V + ++ H + Q +G+ ++ PE + KNP
Sbjct: 164 FLHEDLT---VKIGDFGLATV--KSRWSGSHQFE---QLSGSILWMAPEVIRMQDKNPYS 215
Query: 485 ISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
S DV++ G++ Y+ + G+ P+ + ++ I+
Sbjct: 216 FQS--DVYAFGIVLYELMTGQLPYSNINNRDQII 247
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 36/229 (15%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D +R VA K +L++ ++ A K A RE + K
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHA---KRAYRELVLMKV 79
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD---ATLKILDFGLART------------------A 176
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIFYQCLYGKKPF 508
GT + + P P++ VD+WSVG I + + G F
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 36/229 (15%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D +R VA K +L++ ++ A K A RE + K
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 79
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD---ATLKILDFGLART------------------A 176
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIFYQCLYGKKPF 508
GT + + P P++ VD+WSVG I + + G F
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D +R VA K +L++ ++ A K A RE + K
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 79
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSDCT---LKILDFGLART------------------A 176
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + PE P++ VD+WSVG I
Sbjct: 177 GTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIM 215
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 87 CRLLGICLTSTVQLITQL-MPFGCLLD-YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFG +K++ +E+ Y+ + G
Sbjct: 145 --LVHRDLAARNVLVKTPQ---HVKITDFGRAKLLGAEEKEYHAEGGK------------ 187
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+L G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 87 CRLLGICLTSTVQLITQL-MPFGCLLD-YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 145 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 187
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 83/203 (40%), Gaps = 30/203 (14%)
Query: 340 REYNIHKALDHPRVVKLYDVFE-IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
+E +I + L H ++K E A S V+EY L YL +H +I +
Sbjct: 82 QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFA 140
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE--ENYNPDH 456
Q+ + YL+ IH DL N+LL + +KI DFGL+K + E E Y
Sbjct: 141 QQICEGMAYLHAQH--YIHRDLAARNVLLDNDRL---VKIGDFGLAKAVPEGHEXYRVRE 195
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQ----CLYGKKP----- 507
D + +WY PEC K DVWS GV Y+ C + P
Sbjct: 196 DGD-----SPVFWY-APECL----KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL 245
Query: 508 --FGHNQSQATILEENTILKATE 528
G Q Q T+L +L+ E
Sbjct: 246 ELIGIAQGQMTVLRLTELLERGE 268
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 16/171 (9%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
+ E + L H ++V+LY V F +G L++ + ++ +
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 126
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGM 458
V A++YL +H DL N L+ + V +K++DFGLS+ + ++ Y G
Sbjct: 127 KDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGV---VKVSDFGLSRYVLDDEYTSSVGS 181
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
+ + PPE + K SSK D+W+ GV+ ++ GK P+
Sbjct: 182 KFPVRWS------PPEVLMYS----KFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 20/217 (9%)
Query: 294 LLGKGGFSEVHKAFDL-KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G+G F V+ L + + + C V LN+ + L E I K HP
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----TDIGEVSQFLTEGIIMKDFSHPN 110
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
V+ L + S VL Y DL +F + ++ +QV +KYL
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 170
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
K +H DL N +L E +K+ DFGL++ M ++ Y H GA L
Sbjct: 171 K--FVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYSVH----NKTGAK----L 217
Query: 472 PPECFVV-GKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
P + + K ++K DVWS GV+ ++ + P
Sbjct: 218 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 397 IVMQVVSALKYLNE-IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPD 455
I + L YL++ P +IH D+K NILL E E + DFGL+K+MD Y
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF---EAVVGDFGLAKLMD---YKDX 197
Query: 456 HGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
H + GT ++ PE GK+ S K DV+ GV+ + + G++ F
Sbjct: 198 H---VXXAVRGTIGHIAPEYLSTGKS----SEKTDVFGYGVMLLELITGQRAF 243
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 119/268 (44%), Gaps = 31/268 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + ++ +++ L Y+++HK I + + +Q+ + YL + +
Sbjct: 82 CRLLGI--CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFG +K++ +E+ Y+ + G
Sbjct: 140 --LVHRDLAARNVLVKTPQ---HVKITDFGRAKLLGAEEKEYHAEGGK------------ 182
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPFGHNQSQATILEENTILKATE 528
+P + + +I + + DVWS GV ++ + +G KP+ + E ++IL+ E
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EISSILEKGE 238
Query: 529 VQFANKPTVSNEAKGFIRSCLAYRKEDR 556
+ P + + +R C + R
Sbjct: 239 -RLPQPPICTIDVYMIMRKCWMIDADSR 265
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+L G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 22 VLSSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 80 CRLLGICLTSTVQLITQL-MPFGCLLD-YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 138 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 180
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 36/229 (15%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D +R VA K +L++ ++ A K A RE + K
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHA---KRAYRELVLMKV 79
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD---ATLKILDFGLART------------------A 176
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIFYQCLYGKKPF 508
GT + + P P++ VD+WSVG I + + G F
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 112/271 (41%), Gaps = 31/271 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
L+GKG F +V+ + VA ++ + +D ED+ +K RE ++ H V
Sbjct: 40 LIGKGRFGQVYHG---RWHGEVAIRLIDIERD-NEDQ----LKAFKREVMAYRQTRHENV 91
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE-REARSIVMQVVSALKYLNEIK 412
V L+ + + C G L ++ K + + + R I ++V + YL+
Sbjct: 92 V-LFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH--A 148
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP 472
++H DLK N+ G V ITDFGL + D G +L
Sbjct: 149 KGILHKDLKSKNVFYDNGKVV----ITDFGLFSI--SGVLQAGRREDKLRIQNGWLCHLA 202
Query: 473 PECFVVGKNPPK-------ISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
PE ++ + P S DV+++G I+Y+ + PF ++A I + T +K
Sbjct: 203 PE--IIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMK 260
Query: 526 ATEVQFANKPTVSNEAKGFIRSCLAYRKEDR 556
Q +S+ + C A+ +E+R
Sbjct: 261 PNLSQIGMGKEISD----ILLFCWAFEQEER 287
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 16/171 (9%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
+ E + L H ++V+LY V F +G L++ + ++ +
Sbjct: 51 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 110
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGM 458
V A++YL +H DL N L+ + V +K++DFGLS+ + ++ Y G
Sbjct: 111 KDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGV---VKVSDFGLSRYVLDDEYTSSVGS 165
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
+ + PPE + K SSK D+W+ GV+ ++ GK P+
Sbjct: 166 KFPVRWS------PPEVLMYS----KFSSKSDIWAFGVLMWEIYSLGKMPY 206
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 20/217 (9%)
Query: 294 LLGKGGFSEVHKAFDL-KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G+G F V+ L + + + C V LN+ + L E I K HP
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----TDIGEVSQFLTEGIIMKDFSHPN 111
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
V+ L + S VL Y DL +F + ++ +QV +KYL
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 171
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
K +H DL N +L E +K+ DFGL++ M ++ Y H GA L
Sbjct: 172 K--FVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYSVH----NKTGAK----L 218
Query: 472 PPECFVV-GKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
P + + K ++K DVWS GV+ ++ + P
Sbjct: 219 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + T L G LD Y+++HK I + + +Q+ + YL + +
Sbjct: 80 CRLLGICLTSTVQLITQL-MPFGCLLD-YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFG +K++ +E+ Y+ + G
Sbjct: 138 --LVHRDLAARNVLVKTPQ---HVKITDFGRAKLLGAEEKEYHAEGGK------------ 180
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 16/171 (9%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
+ E + L H ++V+LY V F +G L++ + ++ +
Sbjct: 58 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 117
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGM 458
V A++YL +H DL N L+ + V +K++DFGLS+ + ++ Y G
Sbjct: 118 KDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGV---VKVSDFGLSRYVLDDEYTSSVGS 172
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
+ + PPE + K SSK D+W+ GV+ ++ GK P+
Sbjct: 173 KFPVRWS------PPEVLMY----SKFSSKSDIWAFGVLMWEIYSLGKMPY 213
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 40/231 (17%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D +R VA K +L++ ++ A K A RE + K
Sbjct: 27 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 81
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 82 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 141
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ C +KI DFGL++ A
Sbjct: 142 KHLHSAG--IIHRDLKPSNIVVKSD--C-TLKILDFGLART------------------A 178
Query: 466 GTYWYLPPECFVVGK--NPPKI------SSKVDVWSVGVIFYQCLYGKKPF 508
GT + + P FVV + P++ VD+WSVG I + + G F
Sbjct: 179 GTSFMMVP--FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 227
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 16/171 (9%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
+ E + L H ++V+LY V F +G L++ + ++ +
Sbjct: 47 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 106
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGM 458
V A++YL +H DL N L+ + V +K++DFGLS+ + ++ Y G
Sbjct: 107 KDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGV---VKVSDFGLSRYVLDDEYTSSVGS 161
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
+ + PPE + K SSK D+W+ GV+ ++ GK P+
Sbjct: 162 KFPVRWS------PPEVLMYS----KFSSKSDIWAFGVLMWEIYSLGKMPY 202
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 20/217 (9%)
Query: 294 LLGKGGFSEVHKAFDL-KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G+G F V+ L + + + C V LN+ + L E I K HP
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----TDIGEVSQFLTEGIIMKDFSHPN 84
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
V+ L + S VL Y DL +F + ++ +QV +KYL
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 144
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
K +H DL N +L E +K+ DFGL++ M ++ Y H GA L
Sbjct: 145 K--FVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYSVH----NKTGAK----L 191
Query: 472 PPECFVV-GKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
P + + K ++K DVWS GV+ ++ + P
Sbjct: 192 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 20/217 (9%)
Query: 294 LLGKGGFSEVHKAFDL-KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G+G F V+ L + + + C V LN+ + L E I K HP
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----TDIGEVSQFLTEGIIMKDFSHPN 90
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
V+ L + S VL Y DL +F + ++ +QV +KYL
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 150
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
K +H DL N +L E +K+ DFGL++ M ++ Y H GA L
Sbjct: 151 K--FVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYSVH----NKTGAK----L 197
Query: 472 PPECFVV-GKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
P + + K ++K DVWS GV+ ++ + P
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 20/217 (9%)
Query: 294 LLGKGGFSEVHKAFDL-KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G+G F V+ L + + + C V LN+ + L E I K HP
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----TDIGEVSQFLTEGIIMKDFSHPN 92
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
V+ L + S VL Y DL +F + ++ +QV +KYL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
K +H DL N +L E +K+ DFGL++ M ++ Y H GA L
Sbjct: 153 K--FVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYSVH----NKTGAK----L 199
Query: 472 PPECFVV-GKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
P + + K ++K DVWS GV+ ++ + P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 29/261 (11%)
Query: 259 GYKNLHIRELKRIH------NEDQSRFNNHPVLSDRYLLLM---LLGKGGFSEVHKAFDL 309
G +NL+ + +H N + + H V+ L++ ++G+G F V+ L
Sbjct: 52 GSENLYFQGANTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLL 111
Query: 310 -KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFC 368
+ + + C V LN+ + + ++ + I K HP V+ L + S
Sbjct: 112 DNDGKKIHCAVKSLNRITDIGEVSQFLTEGI----IMKDFSHPNVLSLLGICLRSEGSPL 167
Query: 369 TVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILL 427
VL Y DL +F + ++ +QV +K+L K +H DL N +L
Sbjct: 168 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCML 225
Query: 428 TEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVV-GKNPPKIS 486
E +K+ DFGL++ M ++ ++ H GA LP + + K +
Sbjct: 226 DEKFT---VKVADFGLARDMYDKEFDSVH----NKTGAK----LPVKWMALESLQTQKFT 274
Query: 487 SKVDVWSVGVIFYQCLYGKKP 507
+K DVWS GV+ ++ + P
Sbjct: 275 TKSDVWSFGVLLWELMTRGAP 295
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 20/217 (9%)
Query: 294 LLGKGGFSEVHKAFDL-KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G+G F V+ L + + + C V LN+ + L E I K HP
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----TDIGEVSQFLTEGIIMKDFSHPN 92
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
V+ L + S VL Y DL +F + ++ +QV +KYL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
K +H DL N +L E +K+ DFGL++ M ++ Y H GA L
Sbjct: 153 K--FVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYSVH----NKTGAK----L 199
Query: 472 PPECFVV-GKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
P + + K ++K DVWS GV+ ++ + P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 16/171 (9%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
+ E + L H ++V+LY V F +G L++ + ++ +
Sbjct: 52 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 111
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGM 458
V A++YL +H DL N L+ + V +K++DFGLS+ + ++ Y G
Sbjct: 112 KDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGV---VKVSDFGLSRYVLDDEYTSSVGS 166
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
+ + PPE + K SSK D+W+ GV+ ++ GK P+
Sbjct: 167 KFPVRWS------PPEVLMYS----KFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 109/261 (41%), Gaps = 41/261 (15%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKE-QRYVACKVHQLNKDWKEDKKANYIKHALREY 342
VLS RY ++ LG+G F +V + D K R+VA K+ + + E ++ L
Sbjct: 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI--QVLEHL 68
Query: 343 NIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER--EARSIVMQ 400
N R V++ + FE + C V E DF +K++ + R R + Q
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHGH-ICIVFELLGLSTYDF-IKENGFLPFRLDHIRKMAYQ 126
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGN----------------VCGEIKITDFGLS 444
+ ++ +L+ K + H DLKP NIL + + + +IK+ DFG
Sbjct: 127 ICKSVNFLHSNK--LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG-- 182
Query: 445 KVMDEENYNPDHGMDLTSQGAGTYWYLPPECFV-VGKNPPKISSKVDVWSVGVIFYQCLY 503
Y+ +H L S T Y PE + +G + P DVWS+G I +
Sbjct: 183 ----SATYDDEHHSTLVS----TRHYRAPEVILALGWSQP-----CDVWSIGCILIEYYL 229
Query: 504 GKKPFGHNQSQATILEENTIL 524
G F + S+ + IL
Sbjct: 230 GFTVFPTHDSKEHLAMMERIL 250
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 20/217 (9%)
Query: 294 LLGKGGFSEVHKAFDL-KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G+G F V+ L + + + C V LN+ + L E I K HP
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----TDIGEVSQFLTEGIIMKDFSHPN 91
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
V+ L + S VL Y DL +F + ++ +QV +KYL
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
K +H DL N +L E +K+ DFGL++ M ++ Y H GA L
Sbjct: 152 K--FVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYSVH----NKTGAK----L 198
Query: 472 PPECFVV-GKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
P + + K ++K DVWS GV+ ++ + P
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 35/223 (15%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V +A L E VA K +K +K RE I + + HP V
Sbjct: 47 VIGNGSFGVVFQA-KLVESDEVAIKKVLQDKRFKN-----------RELQIMRIVKHPNV 94
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDG---HDLDFYLKQHKTIAEREARSIVMQVVSAL 405
V L F + D VLEY Y K +T+ + + Q++ +L
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSL 154
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y++ I + H D+KP N+LL + G +K+ DFG +K++ N
Sbjct: 155 AYIHSIG--ICHRDIKPQNLLLDPPS--GVLKLIDFGSAKILIAGEPN--------VSXI 202
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ +Y PE N ++ +D+WS G + + + G+ F
Sbjct: 203 CSRYYRAPELIFGATN---YTTNIDIWSTGCVMAELMQGQPLF 242
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 20/217 (9%)
Query: 294 LLGKGGFSEVHKAFDL-KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G+G F V+ L + + + C V LN+ + L E I K HP
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----TDIGEVSQFLTEGIIMKDFSHPN 89
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
V+ L + S VL Y DL +F + ++ +QV +KYL
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 149
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
K +H DL N +L E +K+ DFGL++ M ++ Y H GA L
Sbjct: 150 K--FVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYSVH----NKTGAK----L 196
Query: 472 PPECFVV-GKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
P + + K ++K DVWS GV+ ++ + P
Sbjct: 197 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 80/203 (39%), Gaps = 30/203 (14%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
RE I + L H +VK E S V+EY L YL +H + +
Sbjct: 60 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQLLLFA 118
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE--ENYNPDH 456
Q+ + YL+ IH L N+LL + +KI DFGL+K + E E Y
Sbjct: 119 QQICEGMAYLH--AQHYIHRALAARNVLLDNDRL---VKIGDFGLAKAVPEGHEYYRVRE 173
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQ----CLYGKKP----- 507
D + +WY PEC K DVWS GV Y+ C + P
Sbjct: 174 DGD-----SPVFWY-APECL----KECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFT 223
Query: 508 --FGHNQSQATILEENTILKATE 528
GH Q Q T+L +L+ E
Sbjct: 224 ELIGHTQGQMTVLRLTELLERGE 246
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 364 ANSFCTVLEYCDGHDLDFYLKQHKTIAER-EARSIVMQVVSALKYLNEIKPPVIHYDLKP 422
A V ++C+G L +L +T E + I Q + YL+ +IH DLK
Sbjct: 75 APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA--KSIIHRDLKS 132
Query: 423 GNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECF-VVGKN 481
NI L E +KI DFGL+ V + ++ H + Q +G+ ++ PE + KN
Sbjct: 133 NNIFLHEDLT---VKIGDFGLATV--KSRWSGSHQFE---QLSGSILWMAPEVIRMQDKN 184
Query: 482 PPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
P S DV++ G++ Y+ + G+ P+ + ++ I+
Sbjct: 185 PYSFQS--DVYAFGIVLYELMTGQLPYSNINNRDQII 219
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 27/238 (11%)
Query: 291 LLMLLGKGGFSEVHK---AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L+ LG G F EV++ + + + V L + E + +++ AL I
Sbjct: 35 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL----IISK 90
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK-------QHKTIAEREARSIVMQ 400
L+H +V+ V F +LE G DL +L+ Q ++A + +
Sbjct: 91 LNHQNIVRCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+ +YL E IH D+ N LLT KI DFG+++ + +Y G +
Sbjct: 150 IACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 207
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
++PPE F+ G +SK D WS GV+ ++ G P+ +Q +
Sbjct: 208 LPVK-----WMPPEAFMEGI----FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 256
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 80/203 (39%), Gaps = 30/203 (14%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
RE I + L H +VK E S V+EY L YL +H + +
Sbjct: 59 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQLLLFA 117
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE--ENYNPDH 456
Q+ + YL+ IH L N+LL + +KI DFGL+K + E E Y
Sbjct: 118 QQICEGMAYLH--AQHYIHRALAARNVLLDNDRL---VKIGDFGLAKAVPEGHEYYRVRE 172
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQ----CLYGKKP----- 507
D + +WY PEC K DVWS GV Y+ C + P
Sbjct: 173 DGD-----SPVFWY-APECL----KECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFT 222
Query: 508 --FGHNQSQATILEENTILKATE 528
GH Q Q T+L +L+ E
Sbjct: 223 ELIGHTQGQMTVLRLTELLERGE 245
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 92/217 (42%), Gaps = 20/217 (9%)
Query: 294 LLGKGGFSEVHKAFDL-KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G+G F V+ L + + + C V LN+ + + ++ + I K HP
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI----IMKDFSHPN 87
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
V+ L + S VL Y DL +F + ++ +QV +KYL
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 147
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
K +H DL N +L E +K+ DFGL++ M ++ Y H GA L
Sbjct: 148 K--FVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYSVH----NKTGAK----L 194
Query: 472 PPECFVV-GKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
P + + K ++K DVWS GV+ ++ + P
Sbjct: 195 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 367 FCTVLEYCDGHDLDFYLKQHKTIAER-EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNI 425
V ++C+G L +L +T E + I Q + YL+ +IH DLK NI
Sbjct: 80 LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA--KSIIHRDLKSNNI 137
Query: 426 LLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECF-VVGKNPPK 484
L E +KI DFGL+ V + ++ H + Q +G+ ++ PE + KNP
Sbjct: 138 FLHEDLT---VKIGDFGLATV--KSRWSGSHQFE---QLSGSILWMAPEVIRMQDKNPYS 189
Query: 485 ISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
S DV++ G++ Y+ + G+ P+ + ++ I+
Sbjct: 190 FQS--DVYAFGIVLYELMTGQLPYSNINNRDQII 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 36/229 (15%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D +R VA K +L++ ++ A K A RE + K
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 79
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ C +KI DFGL++ A
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD--C-TLKILDFGLART------------------A 176
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIFYQCLYGKKPF 508
GT + + P P++ VD+WSVG I + + G F
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D +R VA K +L++ ++ A K A RE + K
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 79
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSDCT---LKILDFGLART------------------A 176
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + PE P++ VD+WSVG I
Sbjct: 177 GTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIM 215
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 367 FCTVLEYCDGHDLDFYLKQHKTIAER-EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNI 425
V ++C+G L +L +T E + I Q + YL+ +IH DLK NI
Sbjct: 83 LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA--KSIIHRDLKSNNI 140
Query: 426 LLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECF-VVGKNPPK 484
L E +KI DFGL+ V + ++ H + Q +G+ ++ PE + KNP
Sbjct: 141 FLHEDLT---VKIGDFGLATV--KSRWSGSHQFE---QLSGSILWMAPEVIRMQDKNPYS 192
Query: 485 ISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
S DV++ G++ Y+ + G+ P+ + ++ I+
Sbjct: 193 FQS--DVYAFGIVLYELMTGQLPYSNINNRDQII 224
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 36/229 (15%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D +R VA K +L++ ++ A K A RE + K
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 79
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ C +KI DFGL++ A
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD--C-TLKILDFGLART------------------A 176
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIFYQCLYGKKPF 508
GT + + P P++ VD+WSVG I + + G F
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 367 FCTVLEYCDGHDLDFYLKQHKTIAER-EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNI 425
V ++C+G L +L +T E + I Q + YL+ +IH DLK NI
Sbjct: 106 LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA--KSIIHRDLKSNNI 163
Query: 426 LLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECF-VVGKNPPK 484
L E +KI DFGL+ ++ ++ H + Q +G+ ++ PE + KNP
Sbjct: 164 FLHEDLT---VKIGDFGLAT--EKSRWSGSHQFE---QLSGSILWMAPEVIRMQDKNPYS 215
Query: 485 ISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
S DV++ G++ Y+ + G+ P+ + ++ I+
Sbjct: 216 FQS--DVYAFGIVLYELMTGQLPYSNINNRDQII 247
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 367 FCTVLEYCDGHDLDFYLKQHKTIAER-EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNI 425
V ++C+G L +L +T E + I Q + YL+ +IH DLK NI
Sbjct: 83 LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA--KSIIHRDLKSNNI 140
Query: 426 LLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECF-VVGKNPPK 484
L E +KI DFGL+ V + ++ H + Q +G+ ++ PE + KNP
Sbjct: 141 FLHEDLT---VKIGDFGLATV--KSRWSGSHQFE---QLSGSILWMAPEVIRMQDKNPYS 192
Query: 485 ISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
S DV++ G++ Y+ + G+ P+ + ++ I+
Sbjct: 193 FQS--DVYAFGIVLYELMTGQLPYSNINNRDQII 224
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 367 FCTVLEYCDGHDLDFYLKQHKTIAER-EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNI 425
V ++C+G L +L +T E + I Q + YL+ +IH DLK NI
Sbjct: 98 LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA--KSIIHRDLKSNNI 155
Query: 426 LLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECF-VVGKNPPK 484
L E +KI DFGL+ ++ ++ H + Q +G+ ++ PE + KNP
Sbjct: 156 FLHEDLT---VKIGDFGLAT--EKSRWSGSHQFE---QLSGSILWMAPEVIRMQDKNPYS 207
Query: 485 ISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
S DV++ G++ Y+ + G+ P+ + ++ I+
Sbjct: 208 FQS--DVYAFGIVLYELMTGQLPYSNINNRDQII 239
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 36/229 (15%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D +R VA K +L++ ++ A K A RE + K
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 80
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 81 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ C +KI DFGL++ A
Sbjct: 141 KHLHSAG--IIHRDLKPSNIVVKSD--C-TLKILDFGLART------------------A 177
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIFYQCLYGKKPF 508
GT + + P P++ VD+WSVG I + + G F
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 226
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 36/229 (15%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D +R VA K +L++ ++ A K A RE + K
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 79
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ C +KI DFGL++ A
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD--C-TLKILDFGLART------------------A 176
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIFYQCLYGKKPF 508
GT + + P P++ VD+WSVG I + + G F
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 27/238 (11%)
Query: 291 LLMLLGKGGFSEVHK---AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L+ LG G F EV++ + + + V L + + E + +++ AL I
Sbjct: 49 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEAL----IISK 104
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK-------QHKTIAEREARSIVMQ 400
+H +V+ V F +LE G DL +L+ Q ++A + +
Sbjct: 105 FNHQNIVRCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+ +YL E IH D+ N LLT KI DFG+++ + +Y G +
Sbjct: 164 IACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
++PPE F+ G +SK D WS GV+ ++ G P+ +Q +
Sbjct: 222 LPVK-----WMPPEAFMEGI----FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 367 FCTVLEYCDGHDLDFYLKQHKTIAER-EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNI 425
V ++C+G L +L +T E + I Q + YL+ +IH DLK NI
Sbjct: 78 LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA--KSIIHRDLKSNNI 135
Query: 426 LLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECF-VVGKNPPK 484
L E +KI DFGL+ V + ++ H + Q +G+ ++ PE + KNP
Sbjct: 136 FLHEDLT---VKIGDFGLATV--KSRWSGSHQFE---QLSGSILWMAPEVIRMQDKNPYS 187
Query: 485 ISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
S DV++ G++ Y+ + G+ P+ + ++ I+
Sbjct: 188 FQS--DVYAFGIVLYELMTGQLPYSNINNRDQII 219
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 20/177 (11%)
Query: 336 KHALREYNIHKALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAE 391
K LRE + HP ++ L D+F E + V E Q I+
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 392 REARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEEN 451
+ + + ++ L L+E V+H DL PGNILL + N +I I DF L++ D +
Sbjct: 134 QHIQYFMYHILLGLHVLHE--AGVVHRDLHPGNILLADNN---DITICDFNLAR-EDTAD 187
Query: 452 YNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
N H + WY PE + K K+ VD+WS G + + K F
Sbjct: 188 ANKTHYV-------THRWYRAPELVMQFKGFTKL---VDMWSAGCVMAEMFNRKALF 234
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 27/238 (11%)
Query: 291 LLMLLGKGGFSEVHK---AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L+ LG G F EV++ + + + V L + E + +++ AL I
Sbjct: 49 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL----IISK 104
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK-------QHKTIAEREARSIVMQ 400
L+H +V+ V F +LE G DL +L+ Q ++A + +
Sbjct: 105 LNHQNIVRCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+ +YL E IH D+ N LLT KI DFG+++ + +Y G +
Sbjct: 164 IACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
++PPE F+ G +SK D WS GV+ ++ G P+ +Q +
Sbjct: 222 LPVK-----WMPPEAFMEGI----FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 20/177 (11%)
Query: 336 KHALREYNIHKALDHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAE 391
K LRE + HP ++ L D+F E + V E Q I+
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 392 REARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEEN 451
+ + + ++ L L+E V+H DL PGNILL + N +I I DF L++ D +
Sbjct: 134 QHIQYFMYHILLGLHVLHE--AGVVHRDLHPGNILLADNN---DITICDFNLAR-EDTAD 187
Query: 452 YNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
N H + WY PE + K K+ VD+WS G + + K F
Sbjct: 188 ANKTHYV-------THRWYRAPELVMQFKGFTKL---VDMWSAGCVMAEMFNRKALF 234
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+L G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + ++ +++ L Y+++HK I + + +Q+ + YL + +
Sbjct: 87 CRLLGI--CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFGL+K++ +E+ Y+ + G
Sbjct: 145 --LVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGK------------ 187
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 20/217 (9%)
Query: 294 LLGKGGFSEVHKAFDL-KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G+G F V+ L + + + C V LN+ + L E I K HP
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----TDIGEVSQFLTEGIIMKDFSHPN 93
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
V+ L + S VL Y DL +F + ++ +QV +K+L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
K +H DL N +L E +K+ DFGL++ M ++ ++ H GA L
Sbjct: 154 K--FVHRDLAARNCMLDEKFT---VKVADFGLARDMLDKEFDSVH----NKTGAK----L 200
Query: 472 PPECFVV-GKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
P + + K ++K DVWS GV+ ++ + P
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + ++ +++ L Y+++HK I + + +Q+ + YL + +
Sbjct: 82 CRLLGI--CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFG +K++ +E+ Y+ + G
Sbjct: 140 --LVHRDLAARNVLVKTPQ---HVKITDFGRAKLLGAEEKEYHAEGGK------------ 182
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 20/217 (9%)
Query: 294 LLGKGGFSEVHKAFDL-KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G+G F V+ L + + + C V LN+ + + ++ + I K HP
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI----IMKDFSHPN 97
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
V+ L + S VL Y DL +F + ++ +QV +K+L
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 157
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
K +H DL N +L E +K+ DFGL++ M ++ ++ H GA L
Sbjct: 158 K--FVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEFDSVH----NKTGAK----L 204
Query: 472 PPECFVV-GKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
P + + K ++K DVWS GV+ ++ + P
Sbjct: 205 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 20/217 (9%)
Query: 294 LLGKGGFSEVHKAFDL-KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G+G F V+ L + + + C V LN+ + + ++ + I K HP
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI----IMKDFSHPN 93
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
V+ L + S VL Y DL +F + ++ +QV +K+L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
K +H DL N +L E +K+ DFGL++ M ++ ++ H GA L
Sbjct: 154 K--FVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEFDSVH----NKTGAK----L 200
Query: 472 PPECFVV-GKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
P + + K ++K DVWS GV+ ++ + P
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 20/217 (9%)
Query: 294 LLGKGGFSEVHKAFDL-KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G+G F V+ L + + + C V LN+ + L E I K HP
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----TDIGEVSQFLTEGIIMKDFSHPN 92
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
V+ L + S VL Y DL +F + ++ +QV +K+L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
K +H DL N +L E +K+ DFGL++ M ++ ++ H GA L
Sbjct: 153 K--FVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEFDSVH----NKTGAK----L 199
Query: 472 PPECFVV-GKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
P + + K ++K DVWS GV+ ++ + P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 295 LGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
LGKG F V +D L + V QL D++ ++ RE I KAL
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDF----QREIQILKALHSDF 72
Query: 353 VVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM---QVVSALKYL 408
+VK V + S V+EY L +L++H+ A +A +++ Q+ ++YL
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYL 130
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+ +H DL NIL+ +KI DFGL+K++ + D+ + + +
Sbjct: 131 GSRR--CVHRDLAARNILVESE---AHVKIADFGLAKLLPLDK---DYYVVREPGQSPIF 182
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQ 500
WY P + N S + DVWS GV+ Y+
Sbjct: 183 WYAPES---LSDN--IFSRQSDVWSFGVVLYE 209
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 20/217 (9%)
Query: 294 LLGKGGFSEVHKAFDL-KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G+G F V+ L + + + C V LN+ + + ++ + I K HP
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI----IMKDFSHPN 92
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
V+ L + S VL Y DL +F + ++ +QV +K+L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
K +H DL N +L E +K+ DFGL++ M ++ ++ H GA L
Sbjct: 153 K--FVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEFDSVH----NKTGAK----L 199
Query: 472 PPECFVV-GKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
P + + K ++K DVWS GV+ ++ + P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 28/213 (13%)
Query: 295 LGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
LGKG F V +D L + V QL D++ ++ RE I KAL
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDF----QREIQILKALHSDF 73
Query: 353 VVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM---QVVSALKYL 408
+VK V + S V+EY L +L++H+ A +A +++ Q+ ++YL
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYL 131
Query: 409 NEIKPPVIHYDLKPGNILL-TEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGT 467
+ +H DL NIL+ +E +V KI DFGL+K++ + D+ + +
Sbjct: 132 GSRR--CVHRDLAARNILVESEAHV----KIADFGLAKLLPLDK---DYYVVREPGQSPI 182
Query: 468 YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQ 500
+WY P + N S + DVWS GV+ Y+
Sbjct: 183 FWYAPES---LSDN--IFSRQSDVWSFGVVLYE 210
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 27/238 (11%)
Query: 291 LLMLLGKGGFSEVHK---AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L+ LG G F EV++ + + + V L + E + +++ AL I
Sbjct: 61 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL----IISK 116
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK-------QHKTIAEREARSIVMQ 400
+H +V+ V F +LE G DL +L+ Q ++A + +
Sbjct: 117 FNHQNIVRCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 175
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+ +YL E IH D+ N LLT KI DFG+++ + +Y G +
Sbjct: 176 IACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 233
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
++PPE F+ G +SK D WS GV+ ++ G P+ +Q +
Sbjct: 234 LPVK-----WMPPEAFMEGI----FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 282
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 28/213 (13%)
Query: 295 LGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
LGKG F V +D L + V QL D++ ++ RE I KAL
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDF----QREIQILKALHSDF 85
Query: 353 VVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM---QVVSALKYL 408
+VK V + S V+EY L +L++H+ A +A +++ Q+ ++YL
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYL 143
Query: 409 NEIKPPVIHYDLKPGNILL-TEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGT 467
+ +H DL NIL+ +E +V KI DFGL+K++ + D+ + +
Sbjct: 144 GSRR--CVHRDLAARNILVESEAHV----KIADFGLAKLLPLDK---DYYVVREPGQSPI 194
Query: 468 YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQ 500
+WY P + N S + DVWS GV+ Y+
Sbjct: 195 FWYAPES---LSDN--IFSRQSDVWSFGVVLYE 222
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 26/220 (11%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG G F V+K + E V K+ K+ +E K L E + ++D+P V
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKV--KIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 83
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEIK 412
+L + ++ +++ L Y+++HK I + + +Q+ + YL + +
Sbjct: 84 CRLLGI--CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 141
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTYWY 470
++H DL N+L+ +KITDFG +K++ +E+ Y+ + G
Sbjct: 142 --LVHRDLAARNVLVKTPQ---HVKITDFGRAKLLGAEEKEYHAEGGK------------ 184
Query: 471 LPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-YGKKPF 508
+P + + +I + + DVWS GV ++ + +G KP+
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 116/286 (40%), Gaps = 49/286 (17%)
Query: 287 DRYLLLMLLGKGGFSEV--HKAFDL---KEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
DR +L LG+G F +V +A L K R V L D E ++ I
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-------------- 387
I K H ++ L D + ++EY +L YL+ +
Sbjct: 88 KMIGK---HKNIINLLGACTQDGPLY-VIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 143
Query: 388 --TIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
++ ++ S QV ++YL K IH DL N+L+TE NV +KI DFGL++
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNV---MKIADFGLAR 198
Query: 446 VMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKI-SSKVDVWSVGVIFYQCL-Y 503
+ +Y T+ G ++ PE +I + + DVWS GV+ ++
Sbjct: 199 DIHHIDYYKK-----TTNGRLPVKWMAPEALF-----DRIYTHQSDVWSFGVLLWEIFTL 248
Query: 504 GKKPFGHNQSQATILEENTILKATEVQFANKPT-VSNEAKGFIRSC 548
G P+ + E +LK E +KP+ +NE +R C
Sbjct: 249 GGSPY----PGVPVEELFKLLK--EGHRMDKPSNCTNELYMMMRDC 288
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 116/286 (40%), Gaps = 49/286 (17%)
Query: 287 DRYLLLMLLGKGGFSEV--HKAFDL---KEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
DR +L LG+G F +V +A L K R V L D E ++ I
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-------------- 387
I K H ++ L D + ++EY +L YL+ +
Sbjct: 80 KMIGK---HKNIINLLGACTQDGPLY-VIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 135
Query: 388 --TIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
++ ++ S QV ++YL K IH DL N+L+TE NV +KI DFGL++
Sbjct: 136 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNV---MKIADFGLAR 190
Query: 446 VMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKI-SSKVDVWSVGVIFYQCL-Y 503
+ +Y T+ G ++ PE +I + + DVWS GV+ ++
Sbjct: 191 DIHHIDYYKK-----TTNGRLPVKWMAPEALF-----DRIYTHQSDVWSFGVLLWEIFTL 240
Query: 504 GKKPFGHNQSQATILEENTILKATEVQFANKPT-VSNEAKGFIRSC 548
G P+ + E +LK E +KP+ +NE +R C
Sbjct: 241 GGSPY----PGVPVEELFKLLK--EGHRMDKPSNCTNELYMMMRDC 280
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D R VA K +L++ ++ A K A RE + K
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 117
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 177
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 178 KHLHSAG--IIHRDLKPSNIVVKSD---CTLKILDFGLART------------------A 214
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + P P++ VD+WSVG I
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 116/286 (40%), Gaps = 49/286 (17%)
Query: 287 DRYLLLMLLGKGGFSEV--HKAFDL---KEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
DR +L LG+G F +V +A L K R V L D E ++ I
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-------------- 387
I K H ++ L D + ++EY +L YL+ +
Sbjct: 77 KMIGK---HKNIINLLGACTQDGPLY-VIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 132
Query: 388 --TIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
++ ++ S QV ++YL K IH DL N+L+TE NV +KI DFGL++
Sbjct: 133 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNV---MKIADFGLAR 187
Query: 446 VMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKI-SSKVDVWSVGVIFYQCL-Y 503
+ +Y T+ G ++ PE +I + + DVWS GV+ ++
Sbjct: 188 DIHHIDYYKK-----TTNGRLPVKWMAPEALF-----DRIYTHQSDVWSFGVLLWEIFTL 237
Query: 504 GKKPFGHNQSQATILEENTILKATEVQFANKPT-VSNEAKGFIRSC 548
G P+ + E +LK E +KP+ +NE +R C
Sbjct: 238 GGSPY----PGVPVEELFKLLK--EGHRMDKPSNCTNELYMMMRDC 277
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 20/217 (9%)
Query: 294 LLGKGGFSEVHKAFDL-KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G+G F V+ L + + + C V LN+ + + ++ + I K HP
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI----IMKDFSHPN 90
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
V+ L + S VL Y DL +F + ++ +QV +K+L
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 150
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
K +H DL N +L E +K+ DFGL++ M ++ ++ H GA L
Sbjct: 151 K--FVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEFDSVH----NKTGAK----L 197
Query: 472 PPECFVV-GKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
P + + K ++K DVWS GV+ ++ + P
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 27/238 (11%)
Query: 291 LLMLLGKGGFSEVHK---AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L+ LG G F EV++ + + + V L + E + +++ AL I
Sbjct: 35 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL----IISK 90
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK-------QHKTIAEREARSIVMQ 400
+H +V+ V F +LE G DL +L+ Q ++A + +
Sbjct: 91 FNHQNIVRCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+ +YL E IH D+ N LLT KI DFG+++ + +Y G +
Sbjct: 150 IACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 207
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
++PPE F+ G +SK D WS GV+ ++ G P+ +Q +
Sbjct: 208 LPVK-----WMPPEAFMEGI----FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 256
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 27/238 (11%)
Query: 291 LLMLLGKGGFSEVHK---AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L+ LG G F EV++ + + + V L + E + +++ AL I
Sbjct: 41 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL----IISK 96
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK-------QHKTIAEREARSIVMQ 400
+H +V+ V F +LE G DL +L+ Q ++A + +
Sbjct: 97 FNHQNIVRCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 155
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+ +YL E IH D+ N LLT KI DFG+++ + +Y G +
Sbjct: 156 IACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 213
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
++PPE F+ G +SK D WS GV+ ++ G P+ +Q +
Sbjct: 214 LPVK-----WMPPEAFMEGI----FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 262
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 367 FCTVLEYCDGHDLDFYLKQHKTIAER-EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNI 425
V ++C+G L +L +T E + I Q + YL+ +IH DLK NI
Sbjct: 78 LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA--KSIIHRDLKSNNI 135
Query: 426 LLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECF-VVGKNPPK 484
L E +KI DFGL+ ++ ++ H + Q +G+ ++ PE + KNP
Sbjct: 136 FLHEDLT---VKIGDFGLAT--EKSRWSGSHQFE---QLSGSILWMAPEVIRMQDKNPYS 187
Query: 485 ISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
S DV++ G++ Y+ + G+ P+ + ++ I+
Sbjct: 188 FQS--DVYAFGIVLYELMTGQLPYSNINNRDQII 219
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 27/238 (11%)
Query: 291 LLMLLGKGGFSEVHK---AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L+ LG G F EV++ + + + V L + E + +++ AL I
Sbjct: 52 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL----IISK 107
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK-------QHKTIAEREARSIVMQ 400
+H +V+ V F +LE G DL +L+ Q ++A + +
Sbjct: 108 FNHQNIVRCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 166
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+ +YL E IH D+ N LLT KI DFG+++ + Y G +
Sbjct: 167 IACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAM 224
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
++PPE F+ G +SK D WS GV+ ++ G P+ +Q +
Sbjct: 225 LPVK-----WMPPEAFMEGI----FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 273
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 115/286 (40%), Gaps = 49/286 (17%)
Query: 287 DRYLLLMLLGKGGFSEV--HKAFDL---KEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
DR +L LG+G F +V +A L K R V L D E ++ I
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-------------- 387
I K H ++ L D + ++EY +L YL+ +
Sbjct: 88 KMIGK---HKNIINLLGACTQDGPLY-VIVEYASKGNLREYLQARRPPGLEFSFNPSHNP 143
Query: 388 --TIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
++ ++ S QV ++YL K IH DL N+L+TE NV +KI DFGL++
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNV---MKIADFGLAR 198
Query: 446 VMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKI-SSKVDVWSVGVIFYQCL-Y 503
+ ++ D T+ W P F +I + + DVWS GV+ ++
Sbjct: 199 ----DIHHIDXXKKTTNGRLPVKWMAPEALF------DRIYTHQSDVWSFGVLLWEIFTL 248
Query: 504 GKKPFGHNQSQATILEENTILKATEVQFANKPT-VSNEAKGFIRSC 548
G P+ + E +LK E +KP+ +NE +R C
Sbjct: 249 GGSPY----PGVPVEELFKLLK--EGHRMDKPSNCTNELYMMMRDC 288
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 27/238 (11%)
Query: 291 LLMLLGKGGFSEVHK---AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L+ LG G F EV++ + + + V L + E + +++ AL I
Sbjct: 51 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL----IISK 106
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK-------QHKTIAEREARSIVMQ 400
+H +V+ V F +LE G DL +L+ Q ++A + +
Sbjct: 107 FNHQNIVRCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 165
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+ +YL E IH D+ N LLT KI DFG+++ + +Y G +
Sbjct: 166 IACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 223
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
++PPE F+ G +SK D WS GV+ ++ G P+ +Q +
Sbjct: 224 LPVK-----WMPPEAFMEGI----FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 272
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 116/286 (40%), Gaps = 49/286 (17%)
Query: 287 DRYLLLMLLGKGGFSEV--HKAFDL---KEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
DR +L LG+G F +V +A L K R V L D E ++ I
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-------------- 387
I K H ++ L D + ++EY +L YL+ +
Sbjct: 81 KMIGK---HKNIINLLGACTQDGPLY-VIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 136
Query: 388 --TIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
++ ++ S QV ++YL K IH DL N+L+TE NV +KI DFGL++
Sbjct: 137 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNV---MKIADFGLAR 191
Query: 446 VMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKI-SSKVDVWSVGVIFYQCL-Y 503
+ +Y T+ G ++ PE +I + + DVWS GV+ ++
Sbjct: 192 DIHHIDYYKK-----TTNGRLPVKWMAPEALF-----DRIYTHQSDVWSFGVLLWEIFTL 241
Query: 504 GKKPFGHNQSQATILEENTILKATEVQFANKPT-VSNEAKGFIRSC 548
G P+ + E +LK E +KP+ +NE +R C
Sbjct: 242 GGSPY----PGVPVEELFKLLK--EGHRMDKPSNCTNELYMMMRDC 281
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 27/238 (11%)
Query: 291 LLMLLGKGGFSEVHK---AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L+ LG G F EV++ + + + V L + E + +++ AL I
Sbjct: 75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL----IISK 130
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK-------QHKTIAEREARSIVMQ 400
+H +V+ V F +LE G DL +L+ Q ++A + +
Sbjct: 131 FNHQNIVRCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 189
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+ +YL E IH D+ N LLT KI DFG+++ + Y G +
Sbjct: 190 IACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAM 247
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
++PPE F+ G +SK D WS GV+ ++ G P+ +Q +
Sbjct: 248 LPVK-----WMPPEAFMEGI----FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 296
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 111/272 (40%), Gaps = 47/272 (17%)
Query: 279 FNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKE---------- 328
F P RY+L+ LG G FS V A D+ +VA K+ + +K + E
Sbjct: 11 FKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQ 70
Query: 329 --DKKANYIKHALREYNIHKALDH-----PRVVKLYDVFEIDANSFCTVLEYCDGHDLDF 381
+ N + ++ +I K LDH P V + VFE+ + +++
Sbjct: 71 RVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKY------- 123
Query: 382 YLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILL----TEGNVCGEIK 437
+H+ I + I Q++ L Y++ + +IH D+KP N+L+ + N+ +IK
Sbjct: 124 ---EHRGIPLIYVKQISKQLLLGLDYMHR-RCGIIHTDIKPENVLMEIVDSPENLI-QIK 178
Query: 438 ITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVI 497
I D G + DE N T Y PE + D+WS +
Sbjct: 179 IADLGNACWYDEHYTN----------SIQTREYRSPEVLL----GAPWGCGADIWSTACL 224
Query: 498 FYQCLYGKKPFGHNQSQATILEENTILKATEV 529
++ + G F ++ + +++ I + E+
Sbjct: 225 IFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH-KTIAEREARSIVMQVVSALK 406
L HP++VK Y V + + V EY L YL+ H K + + + V +
Sbjct: 60 LSHPKLVKFYGVCSKEYPIY-IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMA 118
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
+L + IH DL N L+ + ++C +K++DFG+++ + ++ Y G + +
Sbjct: 119 FLESHQ--FIHRDLAARNCLV-DRDLC--VKVSDFGMTRYVLDDQYVSSVGTKFPVKWSA 173
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATILE 519
PE F + K SSK DVW+ G++ ++ GK P+ + +L+
Sbjct: 174 ------PEVF----HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK 217
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D R VA K +L++ ++ A K A RE + K
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 79
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSDXT---LKILDFGLART------------------A 176
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + P P++ VD+WSVG I
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 215
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 134/324 (41%), Gaps = 60/324 (18%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y L+ LG+G +SEV +A ++ VA K+ + K K ++ ++ N+
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILE------NLRG 90
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-HKTIAEREARSIVMQVVSAL 405
P ++ L D+ + D S L + ++ DF KQ ++T+ + + R + +++ AL
Sbjct: 91 G---PNIITLADIVK-DPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKAL 144
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y + + ++H D+KP N+L+ + ++++ D+GL+ E Y+P G + + A
Sbjct: 145 DYCHSMG--IMHRDVKPHNVLIDHEH--RKLRLIDWGLA-----EFYHP--GQEYNVRVA 193
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
Y + PE V + +D+WS+G + ++ K+PF H L +
Sbjct: 194 SRY-FKGPELLV---DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 526 ATE--------------------------------VQFANKPTVSNEAKGFIRSCLAYRK 553
TE V N+ VS EA F+ L Y
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 554 EDRIDVISLARHDYLQPPVPKHGR 577
+ R+ H Y V R
Sbjct: 310 QSRLTAREAMEHPYFYTVVKDQAR 333
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 27/238 (11%)
Query: 291 LLMLLGKGGFSEVHK---AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L+ LG G F EV++ + + + V L + E + +++ AL I
Sbjct: 35 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL----IISK 90
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK-------QHKTIAEREARSIVMQ 400
+H +V+ V F +LE G DL +L+ Q ++A + +
Sbjct: 91 FNHQNIVRCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+ +YL E IH D+ N LLT KI DFG+++ + +Y G +
Sbjct: 150 IACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAM 207
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
++PPE F+ G +SK D WS GV+ ++ G P+ +Q +
Sbjct: 208 LPVK-----WMPPEAFMEGI----FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 256
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 109/252 (43%), Gaps = 51/252 (20%)
Query: 351 PRVVKLYDVF-EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
P +VKL D+ + + + + EY + D + T+ + + R + +++ AL Y +
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 163
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
++H D+KP N+++ + ++++ D+GL+ E Y+P G + + A Y
Sbjct: 164 S--QGIMHRDVKPHNVMID--HELRKLRLIDWGLA-----EFYHP--GKEYNVRVASRY- 211
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF--GHNQSQATI---------- 517
+ PE V + +D+WS+G +F ++ K+PF GH+ +
Sbjct: 212 FKGPELLV---DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 268
Query: 518 ---------LEENTILKATEVQFANKP-----------TVSNEAKGFIRSCLAYRKEDRI 557
+E + L+A + + KP VS EA F+ L Y ++R+
Sbjct: 269 LNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 328
Query: 558 DVISLARHDYLQ 569
+ H Y Q
Sbjct: 329 TALEAMTHPYFQ 340
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D R VA K +L++ ++ A K A RE + K
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 72
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 132
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 133 KHLHSAG--IIHRDLKPSNIVVKSDXT---LKILDFGLART------------------A 169
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + P P++ VD+WSVG I
Sbjct: 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 208
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 111/272 (40%), Gaps = 47/272 (17%)
Query: 279 FNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKE---------- 328
F P RY+L+ LG G FS V A D+ +VA K+ + +K + E
Sbjct: 11 FKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQ 70
Query: 329 --DKKANYIKHALREYNIHKALDH-----PRVVKLYDVFEIDANSFCTVLEYCDGHDLDF 381
+ N + ++ +I K LDH P V + VFE+ + +++
Sbjct: 71 RVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKY------- 123
Query: 382 YLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILL----TEGNVCGEIK 437
+H+ I + I Q++ L Y++ + +IH D+KP N+L+ + N+ +IK
Sbjct: 124 ---EHRGIPLIYVKQISKQLLLGLDYMHR-RCGIIHTDIKPENVLMEIVDSPENLI-QIK 178
Query: 438 ITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVI 497
I D G + DE N T Y PE + D+WS +
Sbjct: 179 IADLGNACWYDEHYTN----------SIQTREYRSPEVLL----GAPWGCGADIWSTACL 224
Query: 498 FYQCLYGKKPFGHNQSQATILEENTILKATEV 529
++ + G F ++ + +++ I + E+
Sbjct: 225 IFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 115/286 (40%), Gaps = 49/286 (17%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDL-----KEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
DR +L LG+G F +V A + K R V L D E ++ I
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-------------- 387
I K H ++ L D + ++EY +L YL+ +
Sbjct: 73 KMIGK---HKNIINLLGACTQDGPLY-VIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 128
Query: 388 --TIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
++ ++ S QV ++YL K IH DL N+L+TE NV +KI DFGL++
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNV---MKIADFGLAR 183
Query: 446 VMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKI-SSKVDVWSVGVIFYQCL-Y 503
+ +Y T+ G ++ PE +I + + DVWS GV+ ++
Sbjct: 184 DIHHIDYYKK-----TTNGRLPVKWMAPEALF-----DRIYTHQSDVWSFGVLLWEIFTL 233
Query: 504 GKKPFGHNQSQATILEENTILKATEVQFANKPT-VSNEAKGFIRSC 548
G P+ + E +LK E +KP+ +NE +R C
Sbjct: 234 GGSPY----PGVPVEELFKLLK--EGHRMDKPSNCTNELYMMMRDC 273
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 14/113 (12%)
Query: 397 IVMQVVSALKYLNE-IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPD 455
I + L YL++ P +IH D+K NILL E E + DFGL+K+MD Y
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF---EAVVGDFGLAKLMD---YKDX 189
Query: 456 HGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
H + G ++ PE GK+ S K DV+ GV+ + + G++ F
Sbjct: 190 H---VXXAVRGXIGHIAPEYLSTGKS----SEKTDVFGYGVMLLELITGQRAF 235
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 116/286 (40%), Gaps = 49/286 (17%)
Query: 287 DRYLLLMLLGKGGFSEV--HKAFDL---KEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
DR +L LG+G F +V +A L K R V L D E ++ I
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-------------- 387
I K H ++ L D + ++EY +L YL+ +
Sbjct: 88 KMIGK---HKNIINLLGACTQDGPLY-VIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 143
Query: 388 --TIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
++ ++ S QV ++YL K IH DL N+L+TE NV +KI DFGL++
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNV---MKIADFGLAR 198
Query: 446 VMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKI-SSKVDVWSVGVIFYQCL-Y 503
+ +Y T+ G ++ PE +I + + DVWS GV+ ++
Sbjct: 199 DIHHIDYYKK-----TTNGRLPVKWMAPEALF-----DRIYTHQSDVWSFGVLLWEIFTL 248
Query: 504 GKKPFGHNQSQATILEENTILKATEVQFANKPT-VSNEAKGFIRSC 548
G P+ + E +LK E +KP+ +NE +R C
Sbjct: 249 GGSPY----PGVPVEELFKLLK--EGHRMDKPSNCTNELYMMMRDC 288
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 27/238 (11%)
Query: 291 LLMLLGKGGFSEVHK---AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L+ LG G F EV++ + + + V L + E + +++ AL I
Sbjct: 34 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL----IISK 89
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK-------QHKTIAEREARSIVMQ 400
+H +V+ V F +LE G DL +L+ Q ++A + +
Sbjct: 90 FNHQNIVRCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 148
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+ +YL E IH D+ N LLT KI DFG+++ + +Y G +
Sbjct: 149 IACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 206
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
++PPE F+ G +SK D WS GV+ ++ G P+ +Q +
Sbjct: 207 LPVK-----WMPPEAFMEGI----FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 255
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D R VA K +L++ ++ A K A RE + K
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHA---KRAYRELVLMKX 79
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSDXT---LKILDFGLART------------------A 176
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + P P++ VD+WSVG I
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 215
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 27/238 (11%)
Query: 291 LLMLLGKGGFSEVHK---AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L+ LG G F EV++ + + + V L + E + +++ AL I
Sbjct: 26 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL----IISK 81
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK-------QHKTIAEREARSIVMQ 400
+H +V+ V F +LE G DL +L+ Q ++A + +
Sbjct: 82 FNHQNIVRCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 140
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+ +YL E IH D+ N LLT KI DFG+++ + +Y G +
Sbjct: 141 IACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 198
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
++PPE F+ G +SK D WS GV+ ++ G P+ +Q +
Sbjct: 199 LPVK-----WMPPEAFMEGI----FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 247
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 51/252 (20%)
Query: 351 PRVVKLYDVF-EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
P +VKL D+ + + + + EY + D + T+ + + R + +++ AL Y +
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV---LYPTLTDYDIRYYIYELLKALDYCH 142
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
++H D+KP N+++ ++++ D+GL+ E Y+P G + + A Y
Sbjct: 143 --SQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLA-----EFYHP--GKEYNVRVASRY- 190
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF--GHNQSQATI---------- 517
+ PE V + +D+WS+G +F ++ K+PF GH+ +
Sbjct: 191 FKGPELLV---DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 518 ---------LEENTILKATEVQFANKP-----------TVSNEAKGFIRSCLAYRKEDRI 557
+E + L+A + + KP VS EA F+ L Y ++R+
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 558 DVISLARHDYLQ 569
+ H Y Q
Sbjct: 308 TALEAMTHPYFQ 319
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 51/252 (20%)
Query: 351 PRVVKLYDVF-EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
P +VKL D+ + + + + EY + D + T+ + + R + +++ AL Y +
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 143
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
++H D+KP N+++ ++++ D+GL+ E Y+P G + + A Y
Sbjct: 144 --SQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLA-----EFYHP--GKEYNVRVASRY- 191
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF--GHNQSQATI---------- 517
+ PE V + +D+WS+G +F ++ K+PF GH+ +
Sbjct: 192 FKGPELLV---DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 248
Query: 518 ---------LEENTILKATEVQFANKP-----------TVSNEAKGFIRSCLAYRKEDRI 557
+E + L+A + + KP VS EA F+ L Y ++R+
Sbjct: 249 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 308
Query: 558 DVISLARHDYLQ 569
+ H Y Q
Sbjct: 309 TALEAMTHPYFQ 320
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 116/286 (40%), Gaps = 49/286 (17%)
Query: 287 DRYLLLMLLGKGGFSEV--HKAFDL---KEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
DR +L LG+G F +V +A L K R V L D E ++ I
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-------------- 387
I K H ++ L D + ++EY +L YL+ +
Sbjct: 129 KMIGK---HKNIINLLGACTQDGPLY-VIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 184
Query: 388 --TIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
++ ++ S QV ++YL K IH DL N+L+TE NV +KI DFGL++
Sbjct: 185 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNV---MKIADFGLAR 239
Query: 446 VMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISS-KVDVWSVGVIFYQCL-Y 503
+ +Y T+ G ++ PE +I + + DVWS GV+ ++
Sbjct: 240 DIHHIDYYKK-----TTNGRLPVKWMAPEALF-----DRIYTHQSDVWSFGVLLWEIFTL 289
Query: 504 GKKPFGHNQSQATILEENTILKATEVQFANKPT-VSNEAKGFIRSC 548
G P+ + E +LK E +KP+ +NE +R C
Sbjct: 290 GGSPY----PGVPVEELFKLLK--EGHRMDKPSNCTNELYMMMRDC 329
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D R VA K +L++ ++ A K A RE + K
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHA---KRAYRELVLMKX 79
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGI 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSDXT---LKILDFGLART------------------A 176
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + P P++ VD+WSVG I
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 215
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 51/252 (20%)
Query: 351 PRVVKLYDVF-EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
P +VKL D+ + + + + EY + D + T+ + + R + +++ AL Y +
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 142
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
++H D+KP N+++ ++++ D+GL+ E Y+P G + + A Y
Sbjct: 143 --SQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLA-----EFYHP--GKEYNVRVASRY- 190
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF--GHNQSQATI---------- 517
+ PE V + +D+WS+G +F ++ K+PF GH+ +
Sbjct: 191 FKGPELLV---DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 518 ---------LEENTILKATEVQFANKP-----------TVSNEAKGFIRSCLAYRKEDRI 557
+E + L+A + + KP VS EA F+ L Y ++R+
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 558 DVISLARHDYLQ 569
+ H Y Q
Sbjct: 308 TALEAMTHPYFQ 319
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 116/286 (40%), Gaps = 49/286 (17%)
Query: 287 DRYLLLMLLGKGGFSEV--HKAFDL---KEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
DR +L LG+G F +V +A L K R V L D E ++ I
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ---------------- 385
I K H ++ L D + ++EY +L YL+
Sbjct: 88 KMIGK---HKNIINLLGACTQDGPLY-VIVEYASKGNLREYLQAREPPGLEYSYNPSHNP 143
Query: 386 HKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
+ ++ ++ S QV ++YL K IH DL N+L+TE NV +KI DFGL++
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNV---MKIADFGLAR 198
Query: 446 VMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKI-SSKVDVWSVGVIFYQCL-Y 503
+ +Y T+ G ++ PE +I + + DVWS GV+ ++
Sbjct: 199 DIHHIDYYKK-----TTNGRLPVKWMAPEALF-----DRIYTHQSDVWSFGVLLWEIFTL 248
Query: 504 GKKPFGHNQSQATILEENTILKATEVQFANKPT-VSNEAKGFIRSC 548
G P+ + E +LK E +KP+ +NE +R C
Sbjct: 249 GGSPY----PGVPVEELFKLLK--EGHRMDKPSNCTNELYMMMRDC 288
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 89/217 (41%), Gaps = 20/217 (9%)
Query: 294 LLGKGGFSEVHKAFDL-KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G+G F V+ L + + + C V LN+ + L E I K HP
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----TDIGEVSQFLTEGIIMKDFSHPN 91
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEI 411
V+ L + S VL Y DL +F + ++ +QV +KYL
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
K +H DL N +L E +K+ DFGL++ M ++ H GA L
Sbjct: 152 K--FVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEXXSVH----NKTGAK----L 198
Query: 472 PPECFVV-GKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
P + + K ++K DVWS GV+ ++ + P
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 91/219 (41%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D R VA K +L++ ++ A K A RE + K
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 80
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 81 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ C +KI DFGL++ A
Sbjct: 141 KHLHSAG--IIHRDLKPSNIVVKSD--C-TLKILDFGLART------------------A 177
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + P P++ VD+WSVG I
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 216
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D R VA K +L++ ++ A K A RE + K
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 117
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 177
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 178 KHLHSAG--IIHRDLKPSNIVVKSD---CTLKILDFGLART------------------A 214
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + P P++ VD+WSVG I
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 33/221 (14%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDH 350
LL +GKG F +V + V C K D A L E ++ L H
Sbjct: 25 LLQTIGKGEFGDVMLGDYRGNKVAVKCI--------KNDATAQAF---LAEASVMTQLRH 73
Query: 351 PRVVKLYDVFEIDANSFCTVLEY-CDGHDLDFYLKQHKTIAEREAR-SIVMQVVSALKYL 408
+V+L V + V EY G +D+ + +++ + + V A++YL
Sbjct: 74 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 133
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+H DL N+L++E NV K++DFGL+K E + D G A
Sbjct: 134 E--GNNFVHRDLAARNVLVSEDNVA---KVSDFGLTK---EASSTQDTGKLPVKWTA--- 182
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
PE K S+K DVWS G++ ++ +G+ P+
Sbjct: 183 ----PEAL----REKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 51/252 (20%)
Query: 351 PRVVKLYDVF-EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
P +VKL D+ + + + + EY + D + T+ + + R + +++ AL Y +
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV---LYPTLTDYDIRYYIYELLKALDYCH 142
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
++H D+KP N+++ ++++ D+GL+ E Y+P G + + A Y
Sbjct: 143 --SQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLA-----EFYHP--GKEYNVRVASRY- 190
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF--GHNQSQATI---------- 517
+ PE V + +D+WS+G +F ++ K+PF GH+ +
Sbjct: 191 FKGPELLV---DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 518 ---------LEENTILKATEVQFANKP-----------TVSNEAKGFIRSCLAYRKEDRI 557
+E + L+A + + KP VS EA F+ L Y ++R+
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 558 DVISLARHDYLQ 569
+ H Y Q
Sbjct: 308 TALEAMTHPYFQ 319
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 91/219 (41%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D R VA K +L++ ++ A K A RE + K
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 79
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ C +KI DFGL++ A
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD--C-TLKILDFGLART------------------A 176
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + P P++ VD+WSVG I
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 215
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 138/331 (41%), Gaps = 60/331 (18%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y L+ LG+G +SEV +A ++ V K+ + K K ++ ++ N+
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILE------NLRG 90
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-HKTIAEREARSIVMQVVSAL 405
P ++ L D+ + D S L + ++ DF KQ ++T+ + + R + +++ AL
Sbjct: 91 G---PNIITLADIVK-DPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKAL 144
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y + + ++H D+KP N+++ + ++++ D+GL+ E Y+P G + + A
Sbjct: 145 DYCHSMG--IMHRDVKPHNVMIDHEH--RKLRLIDWGLA-----EFYHP--GQEYNVRVA 193
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
Y + PE V + +D+WS+G + ++ K+PF H L +
Sbjct: 194 SRY-FKGPELLV---DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 526 ATE--------------------------------VQFANKPTVSNEAKGFIRSCLAYRK 553
TE V N+ VS EA F+ L Y
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 554 EDRIDVISLARHDYLQPPVPKHGRQSASSSA 584
+ R+ H Y P V + + A ++
Sbjct: 310 QSRLTAREAMEHPYFYPVVKEQSQPCADNAV 340
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 91/219 (41%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D R VA K +L++ ++ A K A RE + K
Sbjct: 24 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 78
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 79 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 138
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ C +KI DFGL++ A
Sbjct: 139 KHLHSAG--IIHRDLKPSNIVVKSD--C-TLKILDFGLART------------------A 175
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + P P++ VD+WSVG I
Sbjct: 176 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 214
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKE-QRYVACKVHQLNKDWKEDKKANYIKHALREY 342
VLS RY ++ LG+G F +V + D K R+VA K+ + + E ++ L
Sbjct: 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI--QVLEHL 68
Query: 343 NIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER--EARSIVMQ 400
N R V++ + FE C V E DF +K++ + R R + Q
Sbjct: 69 NTTDPNSTFRCVQMLEWFE-HHGHICIVFELLGLSTYDF-IKENGFLPFRLDHIRKMAYQ 126
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGN----------------VCGEIKITDFGLS 444
+ ++ +L+ K + H DLKP NIL + + + +IK+ DFG S
Sbjct: 127 ICKSVNFLHSNK--LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG-S 183
Query: 445 KVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYG 504
D+E++ ++ ++ P +G + P DVWS+G I + G
Sbjct: 184 ATYDDEHH--------STLVXXRHYRAPEVILALGWSQP-----CDVWSIGCILIEYYLG 230
Query: 505 KKPFGHNQSQATILEENTIL 524
F + S+ + IL
Sbjct: 231 FTVFPTHDSKEHLAMMERIL 250
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 91/219 (41%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D R VA K +L++ ++ A K A RE + K
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 79
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ C +KI DFGL++ A
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD--CT-LKILDFGLART------------------A 176
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + P P++ VD+WSVG I
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 215
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 91/219 (41%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D R VA K +L++ ++ A K A RE + K
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 80
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 81 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ C +KI DFGL++ A
Sbjct: 141 KHLHSAG--IIHRDLKPSNIVVKSD--C-TLKILDFGLART------------------A 177
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + P P++ VD+WSVG I
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 216
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 51/252 (20%)
Query: 351 PRVVKLYDVF-EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
P +VKL D+ + + + + EY + D + T+ + + R + +++ AL Y +
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 144
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
++H D+KP N+++ ++++ D+GL+ E Y+P G + + A Y
Sbjct: 145 --SQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLA-----EFYHP--GKEYNVRVASRY- 192
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF--GHNQSQATI---------- 517
+ PE V + +D+WS+G +F ++ K+PF GH+ +
Sbjct: 193 FKGPELLV---DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 249
Query: 518 ---------LEENTILKATEVQFANKP-----------TVSNEAKGFIRSCLAYRKEDRI 557
+E + L+A + + KP VS EA F+ L Y ++R+
Sbjct: 250 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 309
Query: 558 DVISLARHDYLQ 569
+ H Y Q
Sbjct: 310 TALEAMTHPYFQ 321
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 51/252 (20%)
Query: 351 PRVVKLYDVF-EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
P +VKL D+ + + + + EY + D + T+ + + R + +++ AL Y +
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 143
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
++H D+KP N+++ ++++ D+GL+ E Y+P G + + A Y
Sbjct: 144 --SQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLA-----EFYHP--GKEYNVRVASRY- 191
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF--GHNQSQATI---------- 517
+ PE V + +D+WS+G +F ++ K+PF GH+ +
Sbjct: 192 FKGPELLV---DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 248
Query: 518 ---------LEENTILKATEVQFANKP-----------TVSNEAKGFIRSCLAYRKEDRI 557
+E + L+A + + KP VS EA F+ L Y ++R+
Sbjct: 249 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 308
Query: 558 DVISLARHDYLQ 569
+ H Y Q
Sbjct: 309 TALEAMTHPYFQ 320
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 37/201 (18%)
Query: 339 LREYNIHKA-----LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ---HKTIA 390
LRE H+A L HP VV L V D + YC DL +L H +
Sbjct: 72 LREEFRHEAMLRARLQHPNVVCLLGVVTKD-QPLSMIFSYCSHGDLHEFLVMRSPHSDVG 130
Query: 391 ----EREARS---------IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIK 437
+R +S +V Q+ + ++YL+ V+H DL N+L+ + +K
Sbjct: 131 STDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKL---NVK 185
Query: 438 ITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVI 497
I+D GL + E Y D+ L + W + PE + GK S D+WS GV+
Sbjct: 186 ISDLGLFR----EVYAADYYKLLGNSLLPIRW-MAPEAIMYGK----FSIDSDIWSYGVV 236
Query: 498 FYQCL-YGKKPFGHNQSQATI 517
++ YG +P+ +Q +
Sbjct: 237 LWEVFSYGLQPYCGYSNQDVV 257
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 22/174 (12%)
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
+ E + L H ++V+LY V F +G L++ + ++ +
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 126
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK-VMDEENYNPDHG 457
V A++YL +H DL N L+ + V +K++DFGLS+ V+D+E
Sbjct: 127 KDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGV---VKVSDFGLSRYVLDDE------- 174
Query: 458 MDLTSQGAG--TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
+ +S G+ W PPE + K SSK D+W+ GV+ ++ GK P+
Sbjct: 175 -ETSSVGSKFPVRWS-PPEVLMYSK----FSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 51/252 (20%)
Query: 351 PRVVKLYDVF-EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
P +VKL D+ + + + + EY + D + T+ + + R + +++ AL Y +
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV---LYPTLTDYDIRYYIYELLKALDYCH 142
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
++H D+KP N+++ ++++ D+GL+ E Y+P G + + A Y
Sbjct: 143 --SQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLA-----EFYHP--GKEYNVRVASRY- 190
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF--GHNQSQATI---------- 517
+ PE V + +D+WS+G +F ++ K+PF GH+ +
Sbjct: 191 FKGPELLV---DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 518 ---------LEENTILKATEVQFANKP-----------TVSNEAKGFIRSCLAYRKEDRI 557
+E + L+A + + KP VS EA F+ L Y ++R+
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 558 DVISLARHDYLQ 569
+ H Y Q
Sbjct: 308 TALEAMTHPYFQ 319
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 41/218 (18%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LG G F EV A K + VA K + + ++ L E N+ K L H ++V
Sbjct: 190 LGAGQFGEVWMATYNKHTK-VAVKTMK--------PGSMSVEAFLAEANVMKTLQHDKLV 240
Query: 355 KLYDVFEIDANSFCTVLEY-CDGHDLDFYLKQHKTIAEREARSI--VMQVVSALKYLNEI 411
KL+ V + + E+ G LDF LK + + + I Q+ + ++ +
Sbjct: 241 KLHAV--VTKEPIYIITEFMAKGSLLDF-LKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 297
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
IH DL+ NIL++ VC KI DFGL++V G + +
Sbjct: 298 N--YIHRDLRAANILVSASLVC---KIADFGLARV----------GAKFPIK------WT 336
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
PE G + K DVWS G++ + + YG+ P+
Sbjct: 337 APEAINFG----SFTIKSDVWSFGILLMEIVTYGRIPY 370
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D R VA K +L++ ++ A K A RE + K
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 73
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 74 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 134 KHLHSAG--IIHRDLKPSNIVVKSD---CTLKILDFGLART------------------A 170
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + P P++ VD+WSVG I
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 209
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK----TIAEREARSIVMQVVSAL 405
HP +V L F + N + +Y + +L +L +++ + I + L
Sbjct: 94 HPHLVSLIG-FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
YL+ +IH D+K NILL E V KITDFG+SK E + L
Sbjct: 153 HYLH--TRAIIHRDVKSINILLDENFVP---KITDFGISKKGTELDQT-----HLXXVVK 202
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGK 505
GT Y+ PE F+ G+ ++ K DV+S GV+ ++ L +
Sbjct: 203 GTLGYIDPEYFIKGR----LTEKSDVYSFGVVLFEVLCAR 238
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D R VA K +L++ ++ A K A RE + K
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 73
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 74 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 134 KHLHSAG--IIHRDLKPSNIVVKSD---CTLKILDFGLART------------------A 170
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + P P++ VD+WSVG I
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 209
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 51/252 (20%)
Query: 351 PRVVKLYDVF-EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
P +VKL D+ + + + + EY + D + T+ + + R + +++ AL Y +
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV---LYPTLTDYDIRYYIYELLKALDYCH 142
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
++H D+KP N+++ ++++ D+GL+ E Y+P G + + A Y
Sbjct: 143 --SQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLA-----EFYHP--GKEYNVRVASRY- 190
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF--GHNQSQATI---------- 517
+ PE V + +D+WS+G +F ++ K+PF GH+ +
Sbjct: 191 FKGPELLV---DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 518 ---------LEENTILKATEVQFANKP-----------TVSNEAKGFIRSCLAYRKEDRI 557
+E + L+A + + KP VS EA F+ L Y ++R+
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 558 DVISLARHDYLQ 569
+ H Y Q
Sbjct: 308 TALEAMTHPYFQ 319
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 27/218 (12%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LGKG F + K + + K +L + + E+ + ++K E + + L+HP V
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMK--ELIR-FDEETQRTFLK----EVKVMRCLEHPNV 69
Query: 354 VKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREAR-SIVMQVVSALKYLNEI 411
+K V D +F T EY G L +K + R S + S + YL+ +
Sbjct: 70 LKFIGVLYKDKRLNFIT--EYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM 127
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG------- 464
+IH DL N L+ E + + DFGL+++M +E P+ L
Sbjct: 128 N--IIHRDLNSHNCLVRENK---NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
G +++ PE N KVDV+S G++ + +
Sbjct: 183 VGNPYWMAPEMI----NGRSYDEKVDVFSFGIVLCEII 216
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 97/238 (40%), Gaps = 27/238 (11%)
Query: 291 LLMLLGKGGFSEVHK---AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L+ LG G F EV++ + + + V L + E + +++ AL I
Sbjct: 34 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL----IISK 89
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK-------QHKTIAEREARSIVMQ 400
+H +V+ V F ++E G DL +L+ Q ++A + +
Sbjct: 90 FNHQNIVRCIGVSLQSLPRF-ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 148
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+ +YL E IH D+ N LLT KI DFG+++ + +Y G +
Sbjct: 149 IACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 206
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
++PPE F+ G +SK D WS GV+ ++ G P+ +Q +
Sbjct: 207 LPVK-----WMPPEAFMEGI----FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 255
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D +R VA K +L++ ++ A K A RE + K
Sbjct: 30 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 84
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 85 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 144
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 145 KHLHSAG--IIHRDLKPSNIVVKSDCT---LKILDFGLART------------------A 181
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + P P++ VD+WSVG I
Sbjct: 182 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIM 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D R VA K +L++ ++ A K A RE + K
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 72
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 132
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 133 KHLHSAG--IIHRDLKPSNIVVKSD---CTLKILDFGLART------------------A 169
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + P P++ VD+WSVG I
Sbjct: 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 208
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 33/221 (14%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDH 350
LL +GKG F +V + V C K D A L E ++ L H
Sbjct: 10 LLQTIGKGEFGDVMLGDYRGNKVAVKCI--------KNDATAQAF---LAEASVMTQLRH 58
Query: 351 PRVVKLYDVFEIDANSFCTVLEY-CDGHDLDFYLKQHKTIAEREAR-SIVMQVVSALKYL 408
+V+L V + V EY G +D+ + +++ + + V A++YL
Sbjct: 59 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 118
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+H DL N+L++E NV K++DFGL+K E + D G A
Sbjct: 119 E--GNNFVHRDLAARNVLVSEDNVA---KVSDFGLTK---EASSTQDTGKLPVKWTA--- 167
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
PE K S+K DVWS G++ ++ +G+ P+
Sbjct: 168 ----PEAL----REKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D R VA K +L++ ++ A K A RE + K
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHA---KRAYRELVLMKX 79
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 140 KHLHS--AGIIHRDLKPSNIVVKSDXT---LKILDFGLART------------------A 176
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + P P++ VD+WSVG I
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 215
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 37/201 (18%)
Query: 339 LREYNIHKA-----LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ---HKTIA 390
LRE H+A L HP VV L V D + YC DL +L H +
Sbjct: 55 LREEFRHEAMLRARLQHPNVVCLLGVVTKD-QPLSMIFSYCSHGDLHEFLVMRSPHSDVG 113
Query: 391 ----EREARS---------IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIK 437
+R +S +V Q+ + ++YL+ V+H DL N+L+ + +K
Sbjct: 114 STDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKL---NVK 168
Query: 438 ITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVI 497
I+D GL + E Y D+ L + W + PE + GK S D+WS GV+
Sbjct: 169 ISDLGLFR----EVYAADYYKLLGNSLLPIRW-MAPEAIMYGK----FSIDSDIWSYGVV 219
Query: 498 FYQCL-YGKKPFGHNQSQATI 517
++ YG +P+ +Q +
Sbjct: 220 LWEVFSYGLQPYCGYSNQDVV 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 97/238 (40%), Gaps = 27/238 (11%)
Query: 291 LLMLLGKGGFSEVHK---AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L+ LG G F EV++ + + + V L + E + +++ AL I
Sbjct: 49 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL----IISK 104
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK-------QHKTIAEREARSIVMQ 400
+H +V+ V F ++E G DL +L+ Q ++A + +
Sbjct: 105 FNHQNIVRCIGVSLQSLPRF-ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+ +YL E IH D+ N LLT KI DFG+++ + +Y G +
Sbjct: 164 IACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATI 517
++PPE F+ G +SK D WS GV+ ++ G P+ +Q +
Sbjct: 222 LPVK-----WMPPEAFMEGI----FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH----KTIAEREARSIVMQVVSAL 405
HP +V L F + N + +Y + +L +L +++ + I + L
Sbjct: 94 HPHLVSLIG-FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
YL+ +IH D+K NILL E V KITDFG+SK E L
Sbjct: 153 HYLH--TRAIIHRDVKSINILLDENFVP---KITDFGISKKGTELGQT-----HLXXVVK 202
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGK 505
GT Y+ PE F+ G+ ++ K DV+S GV+ ++ L +
Sbjct: 203 GTLGYIDPEYFIKGR----LTEKSDVYSFGVVLFEVLCAR 238
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 33/221 (14%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDH 350
LL +GKG F +V + V C K D A L E ++ L H
Sbjct: 197 LLQTIGKGEFGDVMLGDYRGNKVAVKCI--------KNDATAQAF---LAEASVMTQLRH 245
Query: 351 PRVVKLYDVFEIDANSFCTVLEY-CDGHDLDFYLKQHKTIAEREAR-SIVMQVVSALKYL 408
+V+L V + V EY G +D+ + +++ + + V A++YL
Sbjct: 246 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+H DL N+L++E NV K++DFGL+K E + D G A
Sbjct: 306 E--GNNFVHRDLAARNVLVSEDNVA---KVSDFGLTK---EASSTQDTGKLPVKWTA--- 354
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
PE K S+K DVWS G++ ++ +G+ P+
Sbjct: 355 ----PEAL----REKKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 97/233 (41%), Gaps = 33/233 (14%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D LL L+G+G + V+K ++R VA KV + N+I E NI++
Sbjct: 13 DNLKLLELIGRGRYGAVYKGS--LDERPVAVKVFSFAN------RQNFIN----EKNIYR 60
Query: 347 A--LDHPRVVKLYDVFE-IDANS---FCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
++H + + E + A+ + V+EY L YL H + R +
Sbjct: 61 VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCR-LAHS 119
Query: 401 VVSALKYL-------NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLS-KVMDEENY 452
V L YL + KP + H DL N+L+ C I+DFGLS ++
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC---VISDFGLSMRLTGNRLV 176
Query: 453 NPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISS---KVDVWSVGVIFYQCL 502
P + GT Y+ PE N S +VD++++G+I+++
Sbjct: 177 RPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 36/219 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
RY L +G G V A+D +R VA K +L++ ++ A K A RE + K
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHA---KRAYRELVLMKC 73
Query: 348 LDHPRVVKLYDVF--EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
++H ++ L +VF + F V + D + + ++ Q++ +
Sbjct: 74 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
K+L+ +IH DLKP NI++ +KI DFGL++ A
Sbjct: 134 KHLHSAG--IIHRDLKPSNIVVKSDCT---LKILDFGLART------------------A 170
Query: 466 GTYWYLPPECFVVGKNPPKI------SSKVDVWSVGVIF 498
GT + + P P++ VD+WSVG I
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIM 209
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 47/228 (20%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
L+G GGF +V KA + + YV +V N + A RE LDH
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------------EKAEREVKALAKLDHVN 65
Query: 353 VV---KLYDVFEID----------ANSFCTV--LEYCDGHDLDFYLKQHK--TIAEREAR 395
+V +D F+ D + + C +E+CD L+ ++++ + + + A
Sbjct: 66 IVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLAL 125
Query: 396 SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPD 455
+ Q+ + Y++ K +I+ DLKP NI L + ++KI DFGL + +
Sbjct: 126 ELFEQITKGVDYIHSKK--LINRDLKPSNIFLVDTK---QVKIGDFGLVTSLKNDGKR-- 178
Query: 456 HGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLY 503
+ GT Y+ PE + +VD++++G+I + L+
Sbjct: 179 ------XRSKGTLRYMSPEQI----SSQDYGKEVDLYALGLILAELLH 216
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 82/203 (40%), Gaps = 30/203 (14%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
+E +I + L H ++K E S V+EY L YL +H +I +
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFA 123
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE--ENYNPDH 456
Q+ + YL+ IH +L N+LL + +KI DFGL+K + E E Y
Sbjct: 124 QQICEGMAYLHSQH--YIHRNLAARNVLLDNDRL---VKIGDFGLAKAVPEGHEYYRVRE 178
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQ----CLYGKKP----- 507
D + +WY PEC K DVWS GV Y+ C + P
Sbjct: 179 DGD-----SPVFWY-APECL----KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL 228
Query: 508 --FGHNQSQATILEENTILKATE 528
G Q Q T+L +L+ E
Sbjct: 229 ELIGIAQGQMTVLRLTELLERGE 251
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 13/130 (10%)
Query: 395 RSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNP 454
+ + Q++ ++ L+ V H D+KP N+L+ E + G +K+ DFG +K + N
Sbjct: 132 KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEAD--GTLKLCDFGSAKKLSPSEPNV 189
Query: 455 DHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQ 514
+ + +Y PE + G ++ VD+WSVG IF + + G+ F + S
Sbjct: 190 AY--------ICSRYYRAPE-LIFGNQ--HYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA 238
Query: 515 ATILEENTIL 524
+ E +L
Sbjct: 239 GQLHEIVRVL 248
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 135/328 (41%), Gaps = 60/328 (18%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y L+ LG+G +SEV +A ++ V K+ + K K ++ ++ N+
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILE------NLRG 90
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-HKTIAEREARSIVMQVVSAL 405
P ++ L D+ + D S L + ++ DF KQ ++T+ + + R + +++ AL
Sbjct: 91 G---PNIITLADIVK-DPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKAL 144
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y + + ++H D+KP N+++ + ++++ D+GL+ E Y+P G + + A
Sbjct: 145 DYCHSMG--IMHRDVKPHNVMIDHEH--RKLRLIDWGLA-----EFYHP--GQEYNVRVA 193
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
Y + PE V + +D+WS+G + ++ K+PF H L +
Sbjct: 194 SRY-FKGPELLV---DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 526 ATE--------------------------------VQFANKPTVSNEAKGFIRSCLAYRK 553
TE V N+ VS EA F+ L Y
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 554 EDRIDVISLARHDYLQPPVPKHGRQSAS 581
+ R+ H Y V R +S
Sbjct: 310 QSRLTAREAMEHPYFYTVVKDQARMGSS 337
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 91/221 (41%), Gaps = 33/221 (14%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDH 350
LL +GKG F +V + V C K D A L E ++ L H
Sbjct: 16 LLQTIGKGEFGDVMLGDYRGNKVAVKCI--------KNDATAQAF---LAEASVMTQLRH 64
Query: 351 PRVVKLYDVFEIDANSFCTVLEY-CDGHDLDFYLKQHKTIAEREAR-SIVMQVVSALKYL 408
+V+L V + V EY G +D+ + +++ + + V A++YL
Sbjct: 65 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 124
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+H DL N+L++E NV K++DFGL+K E + D G A
Sbjct: 125 E--GNNFVHRDLAARNVLVSEDNVA---KVSDFGLTK---EASSTQDTGKLPVKWTA--- 173
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
PE S+K DVWS G++ ++ +G+ P+
Sbjct: 174 ----PEAL----REAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 82/203 (40%), Gaps = 30/203 (14%)
Query: 340 REYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
+E +I + L H ++K E S V+EY L YL +H +I +
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFA 123
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE--ENYNPDH 456
Q+ + YL+ IH +L N+LL + +KI DFGL+K + E E Y
Sbjct: 124 QQICEGMAYLHAQH--YIHRNLAARNVLLDNDRL---VKIGDFGLAKAVPEGHEYYRVRE 178
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQ----CLYGKKP----- 507
D + +WY PEC K DVWS GV Y+ C + P
Sbjct: 179 DGD-----SPVFWY-APECL----KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL 228
Query: 508 --FGHNQSQATILEENTILKATE 528
G Q Q T+L +L+ E
Sbjct: 229 ELIGIAQGQMTVLRLTELLERGE 251
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 28/213 (13%)
Query: 295 LGKGGFSEVHKA-FD-LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
LGKG F V +D L + V QL D++ ++ RE I KAL
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDF----QREIQILKALHSDF 69
Query: 353 VVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM---QVVSALKYL 408
+VK V + V+EY L +L++H+ A +A +++ Q+ ++YL
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYL 127
Query: 409 NEIKPPVIHYDLKPGNILL-TEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGT 467
+ +H DL NIL+ +E +V KI DFGL+K++ + D + +
Sbjct: 128 GSRR--CVHRDLAARNILVESEAHV----KIADFGLAKLLPLDK---DXXVVREPGQSPI 178
Query: 468 YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQ 500
+WY P + N S + DVWS GV+ Y+
Sbjct: 179 FWYAPES---LSDN--IFSRQSDVWSFGVVLYE 206
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 34/239 (14%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K +K +K RE I + LDH +
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----------RELQIMRKLDHCNI 111
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 171
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y++ + H D+KP N+LL +K+ DFG +K + N +
Sbjct: 172 AYIHSFG--ICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSY--------I 219
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +L
Sbjct: 220 CSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 275
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 34/239 (14%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K +K +K RE I + LDH +
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----------RELQIMRKLDHCNI 154
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 214
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y++ + H D+KP N+LL +K+ DFG +K + N +
Sbjct: 215 AYIHSFG--ICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSY--------I 262
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +L
Sbjct: 263 CSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 318
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 134/326 (41%), Gaps = 60/326 (18%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y L+ LG+G +SEV +A ++ V K+ + K K ++ ++ N+
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILE------NLRG 90
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-HKTIAEREARSIVMQVVSAL 405
P ++ L D+ + D S L + ++ DF KQ ++T+ + + R + +++ AL
Sbjct: 91 G---PNIITLADIVK-DPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKAL 144
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y + + ++H D+KP N+++ + ++++ D+GL+ E Y+P G + + A
Sbjct: 145 DYCHSMG--IMHRDVKPHNVMIDHEH--RKLRLIDWGLA-----EFYHP--GQEYNVRVA 193
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
Y + PE V + +D+WS+G + ++ K+PF H L +
Sbjct: 194 SRY-FKGPELLV---DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 526 ATE--------------------------------VQFANKPTVSNEAKGFIRSCLAYRK 553
TE V N+ VS EA F+ L Y
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 554 EDRIDVISLARHDYLQPPVPKHGRQS 579
+ R+ H Y V R S
Sbjct: 310 QSRLTAREAMEHPYFYTVVKDQARMS 335
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 34/239 (14%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K +K +K RE I + LDH +
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----------RELQIMRKLDHCNI 113
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 173
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y++ + H D+KP N+LL +K+ DFG +K + N +
Sbjct: 174 AYIHSFG--ICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSY--------I 221
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +L
Sbjct: 222 CSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 277
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 34/239 (14%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K +K +K RE I + LDH +
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----------RELQIMRKLDHCNI 109
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y++ + H D+KP N+LL +K+ DFG +K + N +
Sbjct: 170 AYIHSFG--ICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSY--------I 217
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +L
Sbjct: 218 CSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 273
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 107/268 (39%), Gaps = 66/268 (24%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
S +Y L LG G F V + FD++ + A K K ++ + N RE +I
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALK-----KVLQDPRYKN------RELDIM 54
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHD-------------------------LD 380
K LDH ++KL D F + + D H+ L+
Sbjct: 55 KVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLN 114
Query: 381 FYLKQ-----HKTIAE--REARSIVMQVVS--------ALKYLNEIKPPVIHYDLKPGNI 425
++ HK + R RSI M ++S A+ +++ + + H D+KP N+
Sbjct: 115 VIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG--ICHRDIKPQNL 172
Query: 426 LLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKI 485
L+ + +K+ DFG +K + + + + +Y PE + +
Sbjct: 173 LVNSKD--NTLKLCDFGSAKKLIPS--------EPSVAXICSRFYRAPELMLGAT---EY 219
Query: 486 SSKVDVWSVGVIFYQCLYGKKPFGHNQS 513
+ +D+WS+G +F + + GK F S
Sbjct: 220 TPSIDLWSIGCVFGELILGKPLFSGETS 247
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 38/241 (15%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K +K +K RE I + LDH +
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----------RELQIMRKLDHCNI 109
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK--VMDEENYNPDHGMDLTSQ 463
Y++ + H D+KP N+LL +K+ DFG +K V E N +
Sbjct: 170 AYIHSFG--ICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVS---------- 215
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +
Sbjct: 216 XICSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 272
Query: 524 L 524
L
Sbjct: 273 L 273
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 34/239 (14%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K +K +K RE I + LDH +
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----------RELQIMRKLDHCNI 103
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 163
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y++ + H D+KP N+LL +K+ DFG +K + N +
Sbjct: 164 AYIHSFG--ICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSY--------I 211
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +L
Sbjct: 212 CSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 267
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 34/239 (14%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K +K +K RE I + LDH +
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----------RELQIMRKLDHCNI 80
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 140
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y++ + H D+KP N+LL +K+ DFG +K + N +
Sbjct: 141 AYIHSFG--ICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSY--------I 188
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +L
Sbjct: 189 CSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 244
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 101/244 (41%), Gaps = 41/244 (16%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQ-RYVACKVHQLNKDWKEDKKANYIKHALREYN 343
L +RY ++ LG+G F V + D + VA K+ + + +KE + + L + N
Sbjct: 31 LQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEI--NVLEKIN 88
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE--REARSIVMQV 401
+ V+++D F+ + C E DF LK + + + R + Q+
Sbjct: 89 EKDPDNKNLCVQMFDWFDYHGH-MCISFELLGLSTFDF-LKDNNYLPYPIHQVRHMAFQL 146
Query: 402 VSALKYLNEIKPPVIHYDLKPGNILLTEGNV----------------CGEIKITDFGLSK 445
A+K+L++ K + H DLKP NIL + +++ DFG S
Sbjct: 147 CQAVKFLHDNK--LTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFG-SA 203
Query: 446 VMDEENYNPDHGMDLTSQGAGTYWYLPPECFV-VGKNPPKISSKVDVWSVGVIFYQCLYG 504
D E++ S T Y PE + +G + P DVWS+G I ++ G
Sbjct: 204 TFDHEHH---------STIVSTRHYRAPEVILELGWSQP-----CDVWSIGCIIFEYYVG 249
Query: 505 KKPF 508
F
Sbjct: 250 FTLF 253
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 19/134 (14%)
Query: 377 HDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEI 436
D D + K+ T+ + + S QV +++L+ K IH DL NILL+E NV +
Sbjct: 186 EDSDGFYKEPITMEDLISYSF--QVARGMEFLSSRK--CIHRDLAARNILLSENNV---V 238
Query: 437 KITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKI-SSKVDVWSVG 495
KI DFGL++ + + NPD+ ++ W P F KI S+K DVWS G
Sbjct: 239 KICDFGLARDIYK---NPDYVRKGDTR-LPLKWMAPESIF------DKIYSTKSDVWSYG 288
Query: 496 VIFYQCL-YGKKPF 508
V+ ++ G P+
Sbjct: 289 VLLWEIFSLGGSPY 302
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDH-PRV 353
LG+G F +V +A ++ C+ + K KE A+ K + E I + H V
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAV-KMLKEGATASEYKALMTELKILTHIGHHLNV 93
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI 389
V L ++EYC +L YLK + +
Sbjct: 94 VNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDL 129
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 60/241 (24%)
Query: 294 LLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
L+G GGF +V KA + + YV +V N + A RE LDH
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN------------EKAEREVKALAKLDHVN 66
Query: 353 VV---KLYDVFEID-----------------------ANSFCTV--LEYCDGHDLDFYLK 384
+V +D F+ D + + C +E+CD L+ +++
Sbjct: 67 IVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 126
Query: 385 QHK--TIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFG 442
+ + + + A + Q+ + Y++ K +IH DLKP NI L + ++KI DFG
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIHSKK--LIHRDLKPSNIFLVDTK---QVKIGDFG 181
Query: 443 LSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
L + + ++ GT Y+ PE + +VD++++G+I + L
Sbjct: 182 LVTSLKNDGKR--------TRSKGTLRYMSPEQI----SSQDYGKEVDLYALGLILAELL 229
Query: 503 Y 503
+
Sbjct: 230 H 230
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 34/239 (14%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K +K +K RE I + LDH +
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----------RELQIMRKLDHCNI 88
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 148
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y++ + H D+KP N+LL +K+ DFG +K + N +
Sbjct: 149 AYIHSFG--ICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSY--------I 196
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +L
Sbjct: 197 CSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 252
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 38/241 (15%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K +K +K RE I + LDH +
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----------RELQIMRKLDHCNI 87
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK--VMDEENYNPDHGMDLTSQ 463
Y++ + H D+KP N+LL +K+ DFG +K V E N +
Sbjct: 148 AYIHSFG--ICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVS---------- 193
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +
Sbjct: 194 XICSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 250
Query: 524 L 524
L
Sbjct: 251 L 251
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 94/236 (39%), Gaps = 40/236 (16%)
Query: 295 LGKGGFSEVHKAFDL-----KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LG+G F +V A + K + V V L D E+ ++ + I K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK--- 99
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK----------------TIAERE 393
H ++ L D + ++EY +L YL+ + + ++
Sbjct: 100 HKNIINLLGACTQDGPLY-VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 394 ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
S Q+ ++YL K IH DL N+L+TE NV +KI DFGL++ ++ N
Sbjct: 159 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV---MKIADFGLARDIN----N 209
Query: 454 PDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
D+ T+ W P F + + DVWS GV+ ++ G P+
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALF-----DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 94/236 (39%), Gaps = 40/236 (16%)
Query: 295 LGKGGFSEVHKAFDL-----KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LG+G F +V A + K + V V L D E ++ + I K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--- 99
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK----------------TIAERE 393
H ++ L D + ++EY +L YL+ + + ++
Sbjct: 100 HKNIINLLGACTQDGPLY-VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 394 ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
S Q+ ++YL K IH DL N+L+TE NV +KI DFGL++ ++ N
Sbjct: 159 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV---MKIADFGLARDIN----N 209
Query: 454 PDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
D+ + T+ W P F + + DVWS GV+ ++ G P+
Sbjct: 210 IDYYKNTTNGRLPVKWMAPEALF-----DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 38/241 (15%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K +K +K RE I + LDH +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----------RELQIMRKLDHCNI 75
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK--VMDEENYNPDHGMDLTSQ 463
Y++ + H D+KP N+LL +K+ DFG +K V E N +
Sbjct: 136 AYIHSFG--ICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVS---------- 181
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +
Sbjct: 182 XICSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 524 L 524
L
Sbjct: 239 L 239
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 134/327 (40%), Gaps = 60/327 (18%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y L+ LG+G +SEV +A ++ V K+ + K K ++ ++ N+
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILE------NLRG 90
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-HKTIAEREARSIVMQVVSAL 405
P ++ L D+ + D S L + ++ DF KQ ++T+ + + R + +++ AL
Sbjct: 91 G---PNIITLADIVK-DPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKAL 144
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y + + ++H D+KP N+++ + ++++ D+GL+ E Y+P G + + A
Sbjct: 145 DYCHSMG--IMHRDVKPHNVMIDHEH--RKLRLIDWGLA-----EFYHP--GQEYNVRVA 193
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
Y + PE V + +D+WS+G + ++ K+PF H L +
Sbjct: 194 SRY-FKGPELLV---DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 526 ATE--------------------------------VQFANKPTVSNEAKGFIRSCLAYRK 553
TE V N+ VS EA F+ L Y
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 554 EDRIDVISLARHDYLQPPVPKHGRQSA 580
+ R+ H Y V R +
Sbjct: 310 QSRLTAREAMEHPYFYTVVKDQARMGS 336
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 96/241 (39%), Gaps = 38/241 (15%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K K +K RE I + LDH +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-----------RELQIMRKLDHCNI 75
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK--VMDEENYNPDHGMDLTSQ 463
Y++ + H D+KP N+LL +K+ DFG +K V E N +
Sbjct: 136 AYIHSFG--ICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVS---------- 181
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +
Sbjct: 182 XICSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 524 L 524
L
Sbjct: 239 L 239
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 130/316 (41%), Gaps = 60/316 (18%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y ++ +G+G +SEV + ++ C + K K K +
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE--KCII-------KILKPVKKKKIKREIKILQN 81
Query: 347 ALDHPRVVKLYDVF-EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
+ P +VKL D+ + + + + EY + D + T+ + + R + +++ AL
Sbjct: 82 LMGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV---LYPTLTDYDIRYYIYELLKAL 138
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y + ++H D+KP N+++ ++++ D+GL+ E Y+P G + + A
Sbjct: 139 DYCH--SQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLA-----EFYHP--GKEYNVRVA 187
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF--GHNQSQATI------ 517
Y + PE V + +D+WS+G +F ++ K+PF GH+ +
Sbjct: 188 SRY-FKGPELLV---DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 518 -------------LEENTILKATEVQFANKP-----------TVSNEAKGFIRSCLAYRK 553
+E + L+A + + KP VS EA F+ L Y
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 554 EDRIDVISLARHDYLQ 569
++R+ + H Y Q
Sbjct: 304 QERLTALEAMTHPYFQ 319
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 38/241 (15%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K +K +K RE I + LDH +
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----------RELQIMRKLDHCNI 94
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 154
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK--VMDEENYNPDHGMDLTSQ 463
Y++ + H D+KP N+LL +K+ DFG +K V E N +
Sbjct: 155 AYIHSFG--ICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVS---------- 200
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +
Sbjct: 201 XICSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 257
Query: 524 L 524
L
Sbjct: 258 L 258
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 38/241 (15%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K +K +K RE I + LDH +
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----------RELQIMRKLDHCNI 83
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 143
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK--VMDEENYNPDHGMDLTSQ 463
Y++ + H D+KP N+LL +K+ DFG +K V E N +
Sbjct: 144 AYIHSFG--ICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVS---------- 189
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +
Sbjct: 190 XICSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 246
Query: 524 L 524
L
Sbjct: 247 L 247
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 38/241 (15%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K +K +K RE I + LDH +
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----------RELQIMRKLDHCNI 87
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK--VMDEENYNPDHGMDLTSQ 463
Y++ + H D+KP N+LL +K+ DFG +K V E N +
Sbjct: 148 AYIHSFG--ICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVS---------- 193
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +
Sbjct: 194 XICSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 250
Query: 524 L 524
L
Sbjct: 251 L 251
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 100/243 (41%), Gaps = 39/243 (16%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
DR L LG+G F +V +A + C+ + K KE + + + E I
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV-KMLKEGATHSEHRALMSELKILI 87
Query: 347 ALDH-PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL--KQHKTIAEREARSIV----- 398
+ H VV L ++E+C +L YL K+++ + +EA +
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFL 147
Query: 399 ---------MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE 449
QV +++L K IH DL NILL+E NV +KI DFGL++ + +
Sbjct: 148 TLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNV---VKICDFGLARDIYK 202
Query: 450 ENYNPDHGMDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGK 505
+PD+ +G W P F + + DVWS GV+ ++ G
Sbjct: 203 ---DPDY----VRKGDARLPLKWMAPETIF-----DRVYTIQSDVWSFGVLLWEIFSLGA 250
Query: 506 KPF 508
P+
Sbjct: 251 SPY 253
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 133/324 (41%), Gaps = 60/324 (18%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y L+ LG+G +SEV +A ++ V K+ + K K ++ ++ N+
Sbjct: 42 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILE------NLRG 95
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-HKTIAEREARSIVMQVVSAL 405
P ++ L D+ + D S L + ++ DF KQ ++T+ + + R + +++ AL
Sbjct: 96 G---PNIITLADIVK-DPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKAL 149
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y + + ++H D+KP N+++ + ++++ D+GL+ E Y+P G + + A
Sbjct: 150 DYCHSMG--IMHRDVKPHNVMIDHEH--RKLRLIDWGLA-----EFYHP--GQEYNVRVA 198
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
Y + PE V + +D+WS+G + ++ K+PF H L +
Sbjct: 199 SRY-FKGPELLV---DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 254
Query: 526 ATE--------------------------------VQFANKPTVSNEAKGFIRSCLAYRK 553
TE V N+ VS EA F+ L Y
Sbjct: 255 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 314
Query: 554 EDRIDVISLARHDYLQPPVPKHGR 577
+ R+ H Y V R
Sbjct: 315 QSRLTAREAMEHPYFYTVVKDQAR 338
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 34/239 (14%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K +K +K RE I + LDH +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----------RELQIMRKLDHCNI 75
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y++ + H D+KP N+LL +K+ DFG +K + N +
Sbjct: 136 AYIHSFG--ICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSY--------I 183
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +L
Sbjct: 184 CSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 239
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 133/324 (41%), Gaps = 60/324 (18%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y L+ LG+G +SEV +A ++ V K+ + K K ++ ++ N+
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILE------NLRG 90
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-HKTIAEREARSIVMQVVSAL 405
P ++ L D+ + D S L + ++ DF KQ ++T+ + + R + +++ AL
Sbjct: 91 G---PNIITLADIVK-DPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKAL 144
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y + + ++H D+KP N+++ + ++++ D+GL+ E Y+P G + + A
Sbjct: 145 DYCHSMG--IMHRDVKPHNVMIDHEH--RKLRLIDWGLA-----EFYHP--GQEYNVRVA 193
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
Y + PE V + +D+WS+G + ++ K+PF H L +
Sbjct: 194 SRY-FKGPELLV---DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 526 ATE--------------------------------VQFANKPTVSNEAKGFIRSCLAYRK 553
TE V N+ VS EA F+ L Y
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 554 EDRIDVISLARHDYLQPPVPKHGR 577
+ R+ H Y V R
Sbjct: 310 QSRLTAREAMEHPYFYTVVKDQAR 333
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 133/324 (41%), Gaps = 60/324 (18%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y L+ LG+G +SEV +A ++ V K+ + K K ++ ++ N+
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILE------NLRG 89
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-HKTIAEREARSIVMQVVSAL 405
P ++ L D+ + D S L + ++ DF KQ ++T+ + + R + +++ AL
Sbjct: 90 G---PNIITLADIVK-DPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKAL 143
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y + + ++H D+KP N+++ + ++++ D+GL+ E Y+P G + + A
Sbjct: 144 DYCHSMG--IMHRDVKPHNVMIDHEH--RKLRLIDWGLA-----EFYHP--GQEYNVRVA 192
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
Y + PE V + +D+WS+G + ++ K+PF H L +
Sbjct: 193 SRY-FKGPELLV---DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 248
Query: 526 ATE--------------------------------VQFANKPTVSNEAKGFIRSCLAYRK 553
TE V N+ VS EA F+ L Y
Sbjct: 249 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 308
Query: 554 EDRIDVISLARHDYLQPPVPKHGR 577
+ R+ H Y V R
Sbjct: 309 QSRLTAREAMEHPYFYTVVKDQAR 332
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 133/324 (41%), Gaps = 60/324 (18%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y L+ LG+G +SEV +A ++ V K+ + K K ++ ++ N+
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILE------NLRG 90
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-HKTIAEREARSIVMQVVSAL 405
P ++ L D+ + D S L + ++ DF KQ ++T+ + + R + +++ AL
Sbjct: 91 G---PNIITLADIVK-DPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKAL 144
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y + + ++H D+KP N+++ + ++++ D+GL+ E Y+P G + + A
Sbjct: 145 DYCHSMG--IMHRDVKPHNVMIDHEH--RKLRLIDWGLA-----EFYHP--GQEYNVRVA 193
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
Y + PE V + +D+WS+G + ++ K+PF H L +
Sbjct: 194 SRY-FKGPELLV---DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 526 ATE--------------------------------VQFANKPTVSNEAKGFIRSCLAYRK 553
TE V N+ VS EA F+ L Y
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 554 EDRIDVISLARHDYLQPPVPKHGR 577
+ R+ H Y V R
Sbjct: 310 QSRLTAREAMEHPYFYTVVKDQAR 333
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 133/324 (41%), Gaps = 60/324 (18%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y L+ LG+G +SEV +A ++ V K+ + K K ++ ++ N+
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILE------NLRG 90
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-HKTIAEREARSIVMQVVSAL 405
P ++ L D+ + D S L + ++ DF KQ ++T+ + + R + +++ AL
Sbjct: 91 G---PNIITLADIVK-DPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKAL 144
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y + + ++H D+KP N+++ + ++++ D+GL+ E Y+P G + + A
Sbjct: 145 DYCHSMG--IMHRDVKPHNVMIDHEH--RKLRLIDWGLA-----EFYHP--GQEYNVRVA 193
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
Y + PE V + +D+WS+G + ++ K+PF H L +
Sbjct: 194 SRY-FKGPELLV---DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 526 ATE--------------------------------VQFANKPTVSNEAKGFIRSCLAYRK 553
TE V N+ VS EA F+ L Y
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 554 EDRIDVISLARHDYLQPPVPKHGR 577
+ R+ H Y V R
Sbjct: 310 QSRLTAREAMEHPYFYTVVKDQAR 333
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 38/241 (15%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K +K +K RE I + LDH +
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----------RELQIMRKLDHCNI 79
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK--VMDEENYNPDHGMDLTSQ 463
Y++ + H D+KP N+LL +K+ DFG +K V E N +
Sbjct: 140 AYIHSFG--ICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVS---------- 185
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +
Sbjct: 186 XICSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 242
Query: 524 L 524
L
Sbjct: 243 L 243
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 38/241 (15%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K +K +K RE I + LDH +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----------RELQIMRKLDHCNI 75
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK--VMDEENYNPDHGMDLTSQ 463
Y++ + H D+KP N+LL +K+ DFG +K V E N +
Sbjct: 136 AYIHSFG--ICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVS---------- 181
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +
Sbjct: 182 XICSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 524 L 524
L
Sbjct: 239 L 239
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 38/241 (15%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K +K +K RE I + LDH +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----------RELQIMRKLDHCNI 75
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK--VMDEENYNPDHGMDLTSQ 463
Y++ + H D+KP N+LL +K+ DFG +K V E N +
Sbjct: 136 AYIHSFG--ICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVS---------- 181
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +
Sbjct: 182 XICSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 524 L 524
L
Sbjct: 239 L 239
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 38/241 (15%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K +K +K RE I + LDH +
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----------RELQIMRKLDHCNI 76
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 136
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK--VMDEENYNPDHGMDLTSQ 463
Y++ + H D+KP N+LL +K+ DFG +K V E N +
Sbjct: 137 AYIHSFG--ICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVS---------- 182
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +
Sbjct: 183 XICSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 239
Query: 524 L 524
L
Sbjct: 240 L 240
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+GGF V+K + + K+ + E+ K + +E + H +V
Sbjct: 39 MGEGGFGVVYKGY-VNNTTVAVKKLAAMVDITTEELKQQFD----QEIKVMAKCQHENLV 93
Query: 355 KLYDVFEIDANSFCTVLEYC-DGHDLDFY--LKQHKTIAEREARSIVMQVVSALKYLNEI 411
+L F D + C V Y +G LD L ++ I + + +L+E
Sbjct: 94 ELLG-FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 152
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
IH D+K NILL E KI+DFGL++ ++ + S+ GT Y+
Sbjct: 153 HH--IHRDIKSANILLDEAFTA---KISDFGLARASEKFAQTV-----MXSRIVGTTAYM 202
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCLYG 504
PE +I+ K D++S GV+ + + G
Sbjct: 203 APEAL-----RGEITPKSDIYSFGVVLLEIITG 230
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 95/243 (39%), Gaps = 39/243 (16%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
DR L LG+G F +V +A + C+ + K KE + + + E I
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV-KMLKEGATHSEHRALMSELKILI 76
Query: 347 ALDH-PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-------HKTIAEREARSIV 398
+ H VV L ++E+C +L YL+ +K E + +
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 399 ---------MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE 449
QV +++L K IH DL NILL+E NV +KI DFGL++ + +
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNV---VKICDFGLARDIXK 191
Query: 450 ENYNPDHGMDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGK 505
+ D +G W P F + + DVWS GV+ ++ G
Sbjct: 192 DP-------DXVRKGDARLPLKWMAPETIF-----DRVYTIQSDVWSFGVLLWEIFSLGA 239
Query: 506 KPF 508
P+
Sbjct: 240 SPY 242
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 92/236 (38%), Gaps = 40/236 (16%)
Query: 295 LGKGGFSEVHKAFDL-----KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LG+G F +V A + K + V V L D E ++ + I K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--- 99
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK----------------TIAERE 393
H ++ L D + ++EY +L YL+ + + ++
Sbjct: 100 HKNIINLLGACTQDGPLY-VIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 394 ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
S Q+ ++YL K IH DL N+L+TE NV +KI DFGL++ ++ N
Sbjct: 159 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV---MKIADFGLARDIN----N 209
Query: 454 PDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
D T+ W P F + + DVWS GV+ ++ G P+
Sbjct: 210 IDXXKKTTNGRLPVKWMAPEALF-----DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 95/239 (39%), Gaps = 34/239 (14%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K K +K RE I + LDH +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-----------RELQIMRKLDHCNI 75
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y++ + H D+KP N+LL +K+ DFG +K + N +
Sbjct: 136 AYIHSFG--ICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSY--------I 183
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +L
Sbjct: 184 CSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 239
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 95/239 (39%), Gaps = 34/239 (14%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
++G G F V++A VA K K +K RE I + LDH +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-----------RELQIMRKLDHCNI 75
Query: 354 VKLYDVF-----EIDANSFCTVLEYCDGHDLDF---YLKQHKTIAEREARSIVMQVVSAL 405
V+L F + D VL+Y Y + +T+ + + Q+ +L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y++ + H D+KP N+LL +K+ DFG +K + N +
Sbjct: 136 AYIHSFG--ICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSY--------I 183
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
+ +Y PE + G +S +DVWS G + + L G+ F + ++E +L
Sbjct: 184 CSRYYRAPE-LIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 239
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 24/165 (14%)
Query: 382 YLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNIL--------------L 427
+L +++ +E R ++ + ALK +++ ++H D+KP N L L
Sbjct: 107 FLDILNSLSFQEVREYMLNLFKALKRIHQFG--IVHRDVKPSNFLYNRRLKKYALVDFGL 164
Query: 428 TEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG-----AGTYWYLPPECFVVGKNP 482
+G +I++ F S+ E + L+ + AGT + PE V+ K P
Sbjct: 165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPE--VLTKCP 222
Query: 483 PKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKAT 527
+ ++ +D+WS GVIF L G+ PF T L + ++ +
Sbjct: 223 NQ-TTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGS 266
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 93/236 (39%), Gaps = 40/236 (16%)
Query: 295 LGKGGFSEVHKAFDL-----KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LG+G F +V A + K + V V L D E ++ + I K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--- 99
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK----------------TIAERE 393
H ++ L D + ++EY +L YL+ + + ++
Sbjct: 100 HKNIITLLGACTQDGPLY-VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 394 ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
S Q+ ++YL K IH DL N+L+TE NV +KI DFGL++ ++ N
Sbjct: 159 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV---MKIADFGLARDIN----N 209
Query: 454 PDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
D+ T+ W P F + + DVWS GV+ ++ G P+
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALF-----DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 95/243 (39%), Gaps = 39/243 (16%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
DR L LG+G F +V +A + C+ + K KE + + + E I
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV-KMLKEGATHSEHRALMSELKILI 85
Query: 347 ALDH-PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-------HKTIAEREARSIV 398
+ H VV L ++E+C +L YL+ +K E + +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 399 ---------MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE 449
QV +++L K IH DL NILL+E NV +KI DFGL++ + +
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNV---VKICDFGLARDIXK 200
Query: 450 ENYNPDHGMDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGK 505
+ D +G W P F + + DVWS GV+ ++ G
Sbjct: 201 DP-------DXVRKGDARLPLKWMAPETIF-----DRVYTIQSDVWSFGVLLWEIFSLGA 248
Query: 506 KPF 508
P+
Sbjct: 249 SPY 251
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 97/243 (39%), Gaps = 39/243 (16%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
DR L LG+G F +V +A + C+ + K KE + + + E I
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV-KMLKEGATHSEHRALMSELKILI 122
Query: 347 ALDH-PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-------HKTIAEREARSIV 398
+ H VV L ++E+C +L YL+ +K E + +
Sbjct: 123 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 182
Query: 399 ---------MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE 449
QV +++L K IH DL NILL+E NV +KI DFGL++ + +
Sbjct: 183 TLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNV---VKICDFGLARDIYK 237
Query: 450 ENYNPDHGMDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGK 505
+PD+ +G W P F + + DVWS GV+ ++ G
Sbjct: 238 ---DPDY----VRKGDARLPLKWMAPETIF-----DRVYTIQSDVWSFGVLLWEIFSLGA 285
Query: 506 KPF 508
P+
Sbjct: 286 SPY 288
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 111/225 (49%), Gaps = 28/225 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y L+ LG+G +SEV +A ++ V K+ + K K ++ ++ N+
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILE------NLRG 90
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-HKTIAEREARSIVMQVVSAL 405
P ++ L D+ + D S L + ++ DF KQ ++T+ + + R + +++ AL
Sbjct: 91 G---PNIITLADIVK-DPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKAL 144
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y + + ++H D+KP N+++ + ++++ D+GL+ E Y+P G + + A
Sbjct: 145 DYCHSMG--IMHRDVKPHNVMIDHEH--RKLRLIDWGLA-----EFYHP--GQEYNVRVA 193
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGH 510
Y + PE V + +D+WS+G + ++ K+PF H
Sbjct: 194 SRY-FKGPELLV---DYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 93/236 (39%), Gaps = 40/236 (16%)
Query: 295 LGKGGFSEVHKAFDL-----KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LG+G F +V A + K + V V L D E ++ + I K
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--- 145
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK----------------TIAERE 393
H ++ L D + ++EY +L YL+ + + ++
Sbjct: 146 HKNIINLLGACTQDGPLY-VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 394 ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
S Q+ ++YL K IH DL N+L+TE NV +KI DFGL++ ++ N
Sbjct: 205 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV---MKIADFGLARDIN----N 255
Query: 454 PDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
D+ T+ W P F + + DVWS GV+ ++ G P+
Sbjct: 256 IDYYKKTTNGRLPVKWMAPEALF-----DRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 92/236 (38%), Gaps = 40/236 (16%)
Query: 295 LGKGGFSEVHKAFDL-----KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LG+G F +V A + K + V V L D E ++ + I K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--- 99
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK----------------TIAERE 393
H ++ L D + ++EY +L YL+ + + ++
Sbjct: 100 HKNIINLLGACTQDGPLY-VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 394 ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
S Q+ ++YL K IH DL N+L+TE NV +KI DFGL++ ++ N
Sbjct: 159 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV---MKIADFGLARDIN----N 209
Query: 454 PDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
D T+ W P F + + DVWS GV+ ++ G P+
Sbjct: 210 IDXXKKTTNGRLPVKWMAPEALF-----DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 111/225 (49%), Gaps = 28/225 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y L+ LG+G +SEV +A ++ V K+ + K K ++ ++ N+
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILE------NLRG 89
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-HKTIAEREARSIVMQVVSAL 405
P ++ L D+ + D S L + ++ DF KQ ++T+ + + R + +++ AL
Sbjct: 90 G---PNIITLADIVK-DPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKAL 143
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y + + ++H D+KP N+++ + ++++ D+GL+ E Y+P G + + A
Sbjct: 144 DYCHSMG--IMHRDVKPHNVMIDHEH--RKLRLIDWGLA-----EFYHP--GQEYNVRVA 192
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGH 510
Y + PE V + +D+WS+G + ++ K+PF H
Sbjct: 193 SRY-FKGPELLV---DYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 92/234 (39%), Gaps = 40/234 (17%)
Query: 295 LGKGGFSEV--HKAFDL-KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL-DH 350
LG G F +V AF L KE + V L D+K + + E I L H
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK----EALMSELKIMSHLGQH 109
Query: 351 PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ--------------HKTIAEREARS 396
+V L + EYC DL +L++ + T++ R+
Sbjct: 110 ENIVNLLGACT-HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK-VMDEENYNPD 455
QV + +L IH D+ N+LLT G+V KI DFGL++ +M++ NY
Sbjct: 169 FSSQVAQGMAFLAS--KNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIMNDSNYIVK 223
Query: 456 HGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
L + W P F + + DVWS G++ ++ G P+
Sbjct: 224 GNARLPVK-----WMAPESIF-----DCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 132/324 (40%), Gaps = 60/324 (18%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y L+ LG+G +SEV +A ++ V K+ + K K ++ ++ N+
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILE------NLRG 90
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-HKTIAEREARSIVMQVVSAL 405
P ++ L D+ + D S L + ++ DF KQ +T+ + + R + +++ AL
Sbjct: 91 G---PNIITLADIVK-DPVSRTPALVFEHVNNTDF--KQLRQTLTDYDIRFYMYEILKAL 144
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y + + ++H D+KP N+++ + ++++ D+GL+ E Y+P G + + A
Sbjct: 145 DYCHSMG--IMHRDVKPHNVMIDHEH--RKLRLIDWGLA-----EFYHP--GQEYNVRVA 193
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
Y + PE V + +D+WS+G + ++ K+PF H L +
Sbjct: 194 SRY-FKGPELLV---DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 526 ATE--------------------------------VQFANKPTVSNEAKGFIRSCLAYRK 553
TE V N+ VS EA F+ L Y
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 554 EDRIDVISLARHDYLQPPVPKHGR 577
+ R+ H Y V R
Sbjct: 310 QSRLTAREAMEHPYFYTVVKDQAR 333
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 111/225 (49%), Gaps = 28/225 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y L+ LG+G +SEV +A ++ V K+ + K K ++ ++ N+
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILE------NLRG 88
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-HKTIAEREARSIVMQVVSAL 405
P ++ L D+ + D S L + ++ DF KQ ++T+ + + R + +++ AL
Sbjct: 89 G---PNIITLADIVK-DPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKAL 142
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y + + ++H D+KP N+++ + ++++ D+GL+ E Y+P G + + A
Sbjct: 143 DYCHSMG--IMHRDVKPHNVMIDHEH--RKLRLIDWGLA-----EFYHP--GQEYNVRVA 191
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGH 510
Y + PE V + +D+WS+G + ++ K+PF H
Sbjct: 192 SRY-FKGPELLV---DYQMYDYSLDMWSLGCMLASMIFRKEPFFH 232
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 132/330 (40%), Gaps = 58/330 (17%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D Y L+ LG+G +SEV +A ++ V K+ + K K ++ +++ NI K
Sbjct: 38 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRGGTNIIK 97
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
+D V + + + V EY + D + ++ + + + R + +++ AL
Sbjct: 98 LID--------TVKDPVSKTPALVFEYINNTDFK---QLYQILTDFDIRFYMYELLKALD 146
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
Y + ++H D+KP N+++ ++++ D+GL+ E Y+P ++
Sbjct: 147 YCH--SKGIMHRDVKPHNVMIDHQQ--KKLRLIDWGLA-----EFYHPAQEYNVR---VA 194
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKA 526
+ ++ PE V + +D+WS+G + ++ ++PF H Q L +
Sbjct: 195 SRYFKGPELLV---DYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLG 251
Query: 527 TE--------------------------------VQFANKPTVSNEAKGFIRSCLAYRKE 554
TE + N+ VS EA + L Y +
Sbjct: 252 TEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQ 311
Query: 555 DRIDVISLARHDYLQPPVPKHGRQSASSSA 584
R+ H Y P V + + SA ++
Sbjct: 312 QRLTAKEAMEHPYFYPVVKEQSQPSADNAV 341
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 93/236 (39%), Gaps = 40/236 (16%)
Query: 295 LGKGGFSEVHKAFDL-----KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LG+G F +V A + K + V V L D E ++ + I K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--- 99
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK----------------TIAERE 393
H ++ L D + ++EY +L YL+ + + ++
Sbjct: 100 HKNIIHLLGACTQDGPLY-VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 394 ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
S Q+ ++YL K IH DL N+L+TE NV +KI DFGL++ ++ N
Sbjct: 159 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV---MKIADFGLARDIN----N 209
Query: 454 PDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
D+ T+ W P F + + DVWS GV+ ++ G P+
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALF-----DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 45/262 (17%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFD-LKEQRYVACKVHQLNKDWKEDKK--ANYIKHALRE 341
L +RY ++ LG+G F +V + D + + VA K+ + ++E + N +K +
Sbjct: 26 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEK 85
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH--KTIAEREARSIVM 399
+K L V + D F + C E + +F LK++ + R +
Sbjct: 86 DKENKFL----CVLMSDWFNFHGH-MCIAFELLGKNTFEF-LKENNFQPYPLPHVRHMAY 139
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLT---------EGNVCGE-------IKITDFGL 443
Q+ AL++L+E + + H DLKP NIL E C E I++ DFG
Sbjct: 140 QLCHALRFLHENQ--LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG- 196
Query: 444 SKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFV-VGKNPPKISSKVDVWSVGVIFYQCL 502
S D E++ + T Y PPE + +G P DVWS+G I ++
Sbjct: 197 SATFDHEHH---------TTIVATRHYRPPEVILELGWAQP-----CDVWSIGCILFEYY 242
Query: 503 YGKKPFGHNQSQATILEENTIL 524
G F ++++ ++ IL
Sbjct: 243 RGFTLFQTHENREHLVMMEKIL 264
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 97/243 (39%), Gaps = 39/243 (16%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
DR L LG+G F +V +A + C+ + K KE + + + E I
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV-KMLKEGATHSEHRALMSELKILI 85
Query: 347 ALDH-PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-------HKTIAEREARSIV 398
+ H VV L ++E+C +L YL+ +K E + +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 399 ---------MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE 449
QV +++L K IH DL NILL+E NV +KI DFGL++ + +
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNV---VKICDFGLARDIYK 200
Query: 450 ENYNPDHGMDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGK 505
+PD+ +G W P F + + DVWS GV+ ++ G
Sbjct: 201 ---DPDY----VRKGDARLPLKWMAPETIF-----DRVYTIQSDVWSFGVLLWEIFSLGA 248
Query: 506 KPF 508
P+
Sbjct: 249 SPY 251
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 45/262 (17%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFD-LKEQRYVACKVHQLNKDWKEDKK--ANYIKHALRE 341
L +RY ++ LG+G F +V + D + + VA K+ + ++E + N +K +
Sbjct: 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEK 76
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH--KTIAEREARSIVM 399
+K L V + D F + C E + +F LK++ + R +
Sbjct: 77 DKENKFL----CVLMSDWFNFHGH-MCIAFELLGKNTFEF-LKENNFQPYPLPHVRHMAY 130
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLT---------EGNVCGE-------IKITDFGL 443
Q+ AL++L+E + + H DLKP NIL E C E I++ DFG
Sbjct: 131 QLCHALRFLHENQ--LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG- 187
Query: 444 SKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFV-VGKNPPKISSKVDVWSVGVIFYQCL 502
S D E++ + T Y PPE + +G P DVWS+G I ++
Sbjct: 188 SATFDHEHH---------TTIVATRHYRPPEVILELGWAQP-----CDVWSIGCILFEYY 233
Query: 503 YGKKPFGHNQSQATILEENTIL 524
G F ++++ ++ IL
Sbjct: 234 RGFTLFQTHENREHLVMMEKIL 255
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 45/262 (17%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFD-LKEQRYVACKVHQLNKDWKEDKK--ANYIKHALRE 341
L +RY ++ LG+G F +V + D + + VA K+ + ++E + N +K +
Sbjct: 49 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEK 108
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH--KTIAEREARSIVM 399
+K L V + D F + C E + +F LK++ + R +
Sbjct: 109 DKENKFL----CVLMSDWFNFHGH-MCIAFELLGKNTFEF-LKENNFQPYPLPHVRHMAY 162
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLT---------EGNVCGE-------IKITDFGL 443
Q+ AL++L+E + + H DLKP NIL E C E I++ DFG
Sbjct: 163 QLCHALRFLHENQ--LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG- 219
Query: 444 SKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFV-VGKNPPKISSKVDVWSVGVIFYQCL 502
S D E++ + T Y PPE + +G P DVWS+G I ++
Sbjct: 220 SATFDHEHH---------TTIVATRHYRPPEVILELGWAQP-----CDVWSIGCILFEYY 265
Query: 503 YGKKPFGHNQSQATILEENTIL 524
G F ++++ ++ IL
Sbjct: 266 RGFTLFQTHENREHLVMMEKIL 287
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 94/243 (38%), Gaps = 39/243 (16%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
DR L LG+G F +V +A + C+ + K KE + + + E I
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV-KMLKEGATHSEHRALMSELKILI 76
Query: 347 ALDH-PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-------HKTIAEREARSIV 398
+ H VV L + E+C +L YL+ +K E + +
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 399 ---------MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE 449
QV +++L K IH DL NILL+E NV +KI DFGL++ + +
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNV---VKICDFGLARDIXK 191
Query: 450 ENYNPDHGMDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGK 505
+ D +G W P F + + DVWS GV+ ++ G
Sbjct: 192 DP-------DXVRKGDARLPLKWMAPETIF-----DRVYTIQSDVWSFGVLLWEIFSLGA 239
Query: 506 KPF 508
P+
Sbjct: 240 SPY 242
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,453,618
Number of Sequences: 62578
Number of extensions: 659313
Number of successful extensions: 4569
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 775
Number of HSP's that attempted gapping in prelim test: 2039
Number of HSP's gapped (non-prelim): 1168
length of query: 627
length of database: 14,973,337
effective HSP length: 105
effective length of query: 522
effective length of database: 8,402,647
effective search space: 4386181734
effective search space used: 4386181734
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)