RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy4988
(627 letters)
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 235 bits (601), Expect = 1e-72
Identities = 80/320 (25%), Positives = 139/320 (43%), Gaps = 31/320 (9%)
Query: 273 NEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKA 332
+ F + V Y +L +G GG S+V + + ++++ A K L + +
Sbjct: 14 GTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT--- 69
Query: 333 NYIKHALREYNIHKALDHP--RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA 390
+ E L ++++LYD V+E + DL+ +LK+ K+I
Sbjct: 70 --LDSYRNEIAYLNKLQQHSDKIIRLYDYEI-TDQYIYMVMECGNI-DLNSWLKKKKSID 125
Query: 391 EREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEE 450
E +S ++ A+ +++ ++H DLKP N L+ +G +K+ DFG++ M +
Sbjct: 126 PWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVDGM----LKLIDFGIANQMQPD 179
Query: 451 NYNPDHGMDLTSQGAGTYWYLPPECFV-------VGKNPPKISSKVDVWSVGVIFYQCLY 503
+ SQ GT Y+PPE GK+ KIS K DVWS+G I Y Y
Sbjct: 180 ----TTSVVKDSQ-VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 234
Query: 504 GKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLA 563
GK PF +Q + L I E++F + + ++ CL + RI + L
Sbjct: 235 GKTPFQQIINQISKL-HAIIDPNHEIEFP--DIPEKDLQDVLKCCLKRDPKQRISIPELL 291
Query: 564 RHDYLQPPVPKHGRQSASSS 583
H Y+Q + + ++
Sbjct: 292 AHPYVQIQTHPVNQMAKGTT 311
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 226 bits (579), Expect = 6e-69
Identities = 77/338 (22%), Positives = 142/338 (42%), Gaps = 31/338 (9%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
Y +L +G GG S+V + + ++++ A K L + + + E
Sbjct: 10 IYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-----LDSYRNEIAYLNK 63
Query: 348 LDHP--RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
L ++++LYD V+E + DL+ +LK+ K+I E +S ++ A+
Sbjct: 64 LQQHSDKIIRLYDYEI-TDQYIYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAV 121
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
+++ ++H DLKP N L+ +G +K+ DFG++ M + + SQ
Sbjct: 122 HTIHQHG--IVHSDLKPANFLIVDGM----LKLIDFGIANQMQPD----TTSVVKDSQ-V 170
Query: 466 GTYWYLPPECFV-------VGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
GT Y+PPE GK+ KIS K DVWS+G I Y YGK PF +Q + L
Sbjct: 171 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 230
Query: 519 EENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKHGRQ 578
I+ + + + ++ CL + RI + L H Y+Q +
Sbjct: 231 HA--IIDPNH-EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 287
Query: 579 SASSSAPVGHSPASSGQNQNSGGASTQSSAVQQSFATG 616
+ ++ + + + + + + ++ G
Sbjct: 288 AKGTTEEMKYVLGQLVGLNSPNSILKAAKTLYEHYSGG 325
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 220 bits (563), Expect = 4e-66
Identities = 79/317 (24%), Positives = 136/317 (42%), Gaps = 31/317 (9%)
Query: 276 QSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYI 335
S V Y +L +G GG S+V + + ++++ A K L + + +
Sbjct: 45 SSANECISVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-----L 98
Query: 336 KHALREYNIHKALDHP--RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 393
E L ++++LYD V+E + DL+ +LK+ K+I E
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEI-TDQYIYMVMECGNI-DLNSWLKKKKSIDPWE 156
Query: 394 ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
+S ++ A+ +++ ++H DLKP N L+ +G +K+ DFG++ M +
Sbjct: 157 RKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVDGM----LKLIDFGIANQMQPD--- 207
Query: 454 PDHGMDLTSQGAGTYWYLPPECF-------VVGKNPPKISSKVDVWSVGVIFYQCLYGKK 506
+ SQ G Y+PPE GK+ KIS K DVWS+G I Y YGK
Sbjct: 208 -TTSVVKDSQ-VGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 265
Query: 507 PFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHD 566
PF +Q + L I E++F + + ++ CL + RI + L H
Sbjct: 266 PFQQIINQISKLHAI-IDPNHEIEF--PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322
Query: 567 YLQPPVPKHGRQSASSS 583
Y+Q + + ++
Sbjct: 323 YVQIQTHPVNQMAKGTT 339
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 206 bits (527), Expect = 2e-60
Identities = 89/328 (27%), Positives = 148/328 (45%), Gaps = 23/328 (7%)
Query: 247 NNHPVLSDSYLIGYKNLHIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKA 306
L+++ I + + L D Y++ LG G EV A
Sbjct: 95 GKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLA 154
Query: 307 FDLKEQRYVACKVHQLNKD---WKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEID 363
F+ K + VA ++ ++K ++A+ + E I K L+HP ++K+ + F+
Sbjct: 155 FERKTCKKVAIRI--ISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-- 210
Query: 364 ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPG 423
A + VLE +G +L + +K + E + Q++ A++YL+E +IH DLKP
Sbjct: 211 AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPE 268
Query: 424 NILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPP 483
N+LL+ IKITDFG SK++ E + L GT YL PE +V
Sbjct: 269 NVLLSSQEEDCLIKITDFGHSKILGETS--------LMRTLCGTPTYLAPE-VLVSVGTA 319
Query: 484 KISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKP--TVSNEA 541
+ VD WS+GVI + CL G PF +++Q ++ ++ I + F + VS +A
Sbjct: 320 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ--ITSG-KYNFIPEVWAEVSEKA 376
Query: 542 KGFIRSCLAYRKEDRIDVISLARHDYLQ 569
++ L + R RH +LQ
Sbjct: 377 LDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 196 bits (500), Expect = 3e-58
Identities = 66/299 (22%), Positives = 119/299 (39%), Gaps = 36/299 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+ Y +L +G G + K + + + K + +K+ + E N+ +
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM-----LVSEVNLLR 60
Query: 347 ALDHPRVVKLYDVF-EIDANSFCTVLEYCDGHDLDFYLKQHK----TIAEREARSIVMQV 401
L HP +V+ YD + + V+EYC+G DL + + + E ++ Q+
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 402 VSALKYL---NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGM 458
ALK ++ V+H DLKP N+ L +K+ DFGL+++++ H
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILN-------HDT 170
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATI 517
GT +Y+ PE + + + K D+WS+G + Y+ PF +Q +
Sbjct: 171 SFAKTFVGTPYYMSPE--QMNRMS--YNEKSDIWSLGCLLYELCALMPPFTAFSQKE--- 223
Query: 518 LEENTILKATEVQFANKPTV-SNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
K E +F P S+E I L + R V + + + H
Sbjct: 224 ----LAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHHHH 278
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 197 bits (503), Expect = 3e-58
Identities = 89/291 (30%), Positives = 141/291 (48%), Gaps = 25/291 (8%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKD---WKEDKKANYIKHALRE 341
L D Y++ LG G EV AF+ K + VA K+ ++K ++A+ + E
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKI--ISKRKFAIGSAREADPALNVETE 65
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDF-YLKQHKTIAEREARSIVMQ 400
I K L+HP ++K+ + F+ A + VLE +G +L F + +K + E + Q
Sbjct: 66 IEILKKLNHPCIIKIKNFFD--AEDYYIVLELMEGGEL-FDKVVGNKRLKEATCKLYFYQ 122
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
++ A++YL+E +IH DLKP N+LL+ IKITDFG SK++ E + L
Sbjct: 123 MLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--------L 172
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
GT YL PE V + VD WS+GVI + CL G PF +++Q ++ ++
Sbjct: 173 MRTLCGTPTYLAPEVL-VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 231
Query: 521 NTILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I + F + VS +A ++ L + R RH +LQ
Sbjct: 232 --ITSG-KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 196 bits (500), Expect = 2e-57
Identities = 71/348 (20%), Positives = 141/348 (40%), Gaps = 39/348 (11%)
Query: 274 EDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKAN 333
D N + ++Y+ L +G+G F + ++ R K +++ ++++
Sbjct: 11 VDLGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREE- 69
Query: 334 YIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK--TIAE 391
+ RE + + HP +V+ + FE + S V++YC+G DL + K E
Sbjct: 70 ----SRREVAVLANMKHPNIVQYRESFE-ENGSLYIVMDYCEGGDLFKRINAQKGVLFQE 124
Query: 392 REARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEEN 451
+ +Q+ ALK++++ K ++H D+K NI LT+ G +++ DFG+++V+
Sbjct: 125 DQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKD---GTVQLGDFGIARVL---- 175
Query: 452 YNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GH 510
+ ++L GT +YL PE + P ++K D+W++G + Y+ K F
Sbjct: 176 ---NSTVELARACIGTPYYLSPE--ICENKP--YNNKSDIWALGCVLYELCTLKHAFEAG 228
Query: 511 NQSQATILEENTILKATEVQFANKPT-VSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+ +LK F S + + + DR V S+ ++
Sbjct: 229 SMKNL-------VLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIA 281
Query: 570 PPVPKH------GRQSASSSAPVGHSPASSGQNQNSGGASTQSSAVQQ 611
+ K + + S + SG S Q+
Sbjct: 282 KRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKRPASGQNSISVMPAQK 329
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 194 bits (496), Expect = 2e-57
Identities = 74/318 (23%), Positives = 128/318 (40%), Gaps = 50/318 (15%)
Query: 277 SRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIK 336
R+ + + + +LG+G F +V KA + + RY A K + E+K +
Sbjct: 2 LRY------ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKK--IRH--TEEK----LS 47
Query: 337 HALREYNIHKALDHPRVVKLYDVFEIDANSFCT------------VLEYCDGHDLDFYLK 384
L E + +L+H VV+ Y + N +EYC+ L +
Sbjct: 48 TILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIH 107
Query: 385 QHKTIAER-EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGL 443
+R E + Q++ AL Y++ +IH DLKP NI + E +KI DFGL
Sbjct: 108 SENLNQQRDEYWRLFRQILEALSYIHSQG--IIHRDLKPMNIFIDES---RNVKIGDFGL 162
Query: 444 SKVMDE-------ENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGV 496
+K + ++ N D + GT Y+ E V + K+D++S+G+
Sbjct: 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATE---VLDGTGHYNEKIDMYSLGI 219
Query: 497 IFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKE 554
IF++ +Y PF + IL+ L++ ++F K IR + +
Sbjct: 220 IFFEMIY---PFSTGMERVNILK---KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPN 273
Query: 555 DRIDVISLARHDYLQPPV 572
R +L +L
Sbjct: 274 KRPGARTLLNSGWLPVKH 291
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 193 bits (493), Expect = 4e-57
Identities = 85/307 (27%), Positives = 129/307 (42%), Gaps = 28/307 (9%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
RY+ LGKGGF++ + D + A K+ + K K + + E +IH+
Sbjct: 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKI--VPK--SLLLKPHQREKMSMEISIHR 70
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
+L H VV + FE D + VLE C L K+ K + E EAR + Q+V +
Sbjct: 71 SLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 129
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + VIH DLK GN+ L E E+KI DFGL+ ++ D G
Sbjct: 130 YLHRNR--VIHRDLKLGNLFLNED---LEVKIGDFGLATKVE-----YDGERKKVL--CG 177
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKA 526
T Y+ PE V+ K S +VDVWS+G I Y L GK PF +
Sbjct: 178 TPNYIAPE--VLSKK--GHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYL-----RI 227
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQP-PVPKHGRQSASSSAP 585
+ +++ ++ A I+ L R + L ++ +P + + P
Sbjct: 228 KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPP 287
Query: 586 VGHSPAS 592
S
Sbjct: 288 RFSIAPS 294
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 191 bits (488), Expect = 2e-56
Identities = 61/312 (19%), Positives = 115/312 (36%), Gaps = 56/312 (17%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+ + L+G GGF +V KA + + K + N + A RE
Sbjct: 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE-----------KAEREVKALA 59
Query: 347 ALDHPRVVKLYDVFE---------------IDANSFCTVLEYCDGHDLDFYLKQHK--TI 389
LDH +V ++ +E+CD L+ ++++ + +
Sbjct: 60 KLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 119
Query: 390 AEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE 449
+ A + Q+ + Y++ K +I+ DLKP NI L + ++KI DFGL +
Sbjct: 120 DKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIFLVDT---KQVKIGDFGLVTSL-- 172
Query: 450 ENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFG 509
+ T GT Y+ PE + +VD++++G+I + L+
Sbjct: 173 -----KNDGKRTRS-KGTLRYMSPE--QISSQD--YGKEVDLYALGLILAELLHVCDTA- 221
Query: 510 HNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
S + + K ++ L+ + EDR + + R +
Sbjct: 222 FETS-------KFFTDLRDGII--SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272
Query: 570 PPVP-KHGRQSA 580
P K+ R +A
Sbjct: 273 KKSPEKNERHTA 284
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 192 bits (490), Expect = 3e-56
Identities = 90/308 (29%), Positives = 137/308 (44%), Gaps = 28/308 (9%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
RY+ LGKGGF++ + D + A K+ + K K + + E +IH+
Sbjct: 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKI--VPK--SLLLKPHQREKMSMEISIHR 96
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
+L H VV + FE D + VLE C L K+ K + E EAR + Q+V +
Sbjct: 97 SLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 155
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL+ + VIH DLK GN+ L E E+KI DFGL+ ++ D G
Sbjct: 156 YLHRNR--VIHRDLKLGNLFLNED---LEVKIGDFGLATKVE-----YDGERKKVL--CG 203
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKA 526
T Y+ PE V+ K S +VDVWS+G I Y L GK PF + + L+E T L+
Sbjct: 204 TPNYIAPE--VLSKKG--HSFEVDVWSIGCIMYTLLVGKPPF-----ETSCLKE-TYLRI 253
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQP-PVPKHGRQSASSSAP 585
+ +++ ++ A I+ L R + L ++ +P + + P
Sbjct: 254 KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPP 313
Query: 586 VGHSPASS 593
SS
Sbjct: 314 RFSIAPSS 321
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 191 bits (488), Expect = 4e-56
Identities = 66/299 (22%), Positives = 122/299 (40%), Gaps = 30/299 (10%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
YL + LG+GGFS V L + + A K ++ ++D++ A RE ++H+
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALK--RILCHEQQDREE-----AQREADMHRL 82
Query: 348 LDHPRVVKLYDVFEIDANS---FCTVLEYCDGHDLDFYLKQHKT----IAEREARSIVMQ 400
+HP +++L + + +L + L +++ K + E + +++
Sbjct: 83 FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLG 142
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+ L+ ++ H DLKP NILL + G+ + D G + L
Sbjct: 143 ICRGLEAIH--AKGYAHRDLKPTNILLGDE---GQPVLMDLGSMNQACIHVEGSRQALTL 197
Query: 461 TSQGA--GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
A T Y PE F V + I + DVWS+G + Y ++G+ P+
Sbjct: 198 QDWAAQRCTISYRAPELFSVQSHCV-IDERTDVWSLGCVLYAMMFGEGPY-----DMVFQ 251
Query: 519 EENTILKATEVQFA--NKPTVSNEAKGFIRSCLAYRKEDRIDVISLARH-DYLQPPVPK 574
+ +++ A + Q + P S+ + S + R + L + LQPP P
Sbjct: 252 KGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 189 bits (483), Expect = 9e-56
Identities = 79/302 (26%), Positives = 136/302 (45%), Gaps = 27/302 (8%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHAL-REYN 343
+ D Y + LG G F+ V K + A K + K + + + RE N
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKF--IKKRRLSSSRRGVSREEIEREVN 60
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDF-YLKQHKTIAEREARSIVMQVV 402
I + + HP ++ L+D+FE + +LE G +L F +L + +++ E EA + Q++
Sbjct: 61 ILREIRHPNIITLHDIFE-NKTDVVLILELVSGGEL-FDFLAEKESLTEDEATQFLKQIL 118
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGMDLT 461
+ YL+ + + H+DLKP NI+L + NV IK+ DFG++ ++ +
Sbjct: 119 DGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG--------NEF 168
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEEN 521
GT ++ PE +V P + + D+WS+GVI Y L G PF +++ L
Sbjct: 169 KNIFGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPF-LGETKQETLTN- 222
Query: 522 TILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKHGRQS 579
I F + S AK FIR L + R+ + H +++ ++ R
Sbjct: 223 -ISAV-NYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRGE 280
Query: 580 AS 581
S
Sbjct: 281 DS 282
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 190 bits (485), Expect = 1e-55
Identities = 68/295 (23%), Positives = 122/295 (41%), Gaps = 35/295 (11%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
L ++Y++ LG+G F VH+ + ++ K K +E +I
Sbjct: 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKF--------VKVKGTDQVLVKKEISI 54
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVS 403
H ++ L++ FE + E+ G D+ + + ERE S V QV
Sbjct: 55 LNIARHRNILHLHESFE-SMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCE 113
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLT--EGNVCGEIKITDFGLSKVMDEENYNPDHGMDLT 461
AL++L+ + H+D++P NI+ + IKI +FG ++ + P
Sbjct: 114 ALQFLHSHN--IGHFDIRPENIIYQTRRSS---TIKIIEFGQARQLK-----PGDNF--- 160
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEEN 521
Y PE V + +S+ D+WS+G + Y L G PF ++ I+E
Sbjct: 161 RLLFTAPEYYAPE--VHQHDV--VSTATDMWSLGTLVYVLLSGINPF-LAETNQQIIEN- 214
Query: 522 TILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPK 574
I+ A E F + +S EA F+ L ++ R+ +H +L+ + +
Sbjct: 215 -IMNA-EYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIER 267
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 188 bits (479), Expect = 4e-55
Identities = 91/288 (31%), Positives = 136/288 (47%), Gaps = 27/288 (9%)
Query: 272 HNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKK 331
H+ + ++RY ++ +LGKG F EV K D Q+ A KV +D
Sbjct: 7 HSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS 66
Query: 332 ANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE 391
LRE + K LDHP ++KL+++ E D++SF V E G +L + + K +E
Sbjct: 67 T-----ILREVELLKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEIIKRKRFSE 120
Query: 392 REARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEEN 451
+A I+ QV S + Y+++ ++H DLKP NILL +IKI DFGLS +
Sbjct: 121 HDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN- 177
Query: 452 YNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHN 511
GT +Y+ PE V+ K DVWS GVI Y L G PF +
Sbjct: 178 -------TKMKDRIGTAYYIAPE--VLRG---TYDEKCDVWSAGVILYILLSGTPPF-YG 224
Query: 512 QSQATILEENTILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
+++ IL+ + + F T+S++AK IR L + RI
Sbjct: 225 KNEYDILKR--VETG-KYAFDLPQWRTISDDAKDLIRKMLTFHPSLRI 269
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 193 bits (493), Expect = 4e-55
Identities = 94/310 (30%), Positives = 142/310 (45%), Gaps = 27/310 (8%)
Query: 272 HNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKK 331
H+ + ++RY ++ +LGKG F EV K D Q+ A KV +D
Sbjct: 7 HSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS 66
Query: 332 ANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE 391
LRE + K LDHP ++KL+++ E D++SF V E G +L + + K +E
Sbjct: 67 T-----ILREVELLKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEIIKRKRFSE 120
Query: 392 REARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEEN 451
+A I+ QV S + Y+++ ++H DLKP NILL +IKI DFGLS +
Sbjct: 121 HDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN- 177
Query: 452 YNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHN 511
GT +Y+ PE V+ K DVWS GVI Y L G PF +
Sbjct: 178 -------TKMKDRIGTAYYIAPE--VLRGT---YDEKCDVWSAGVILYILLSGTPPF-YG 224
Query: 512 QSQATILEENTILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+++ IL+ + + F T+S++AK IR L + RI H ++Q
Sbjct: 225 KNEYDILKR--VETG-KYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
Query: 570 PPVPKHGRQS 579
+ S
Sbjct: 282 KYSSETPTIS 291
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 188 bits (480), Expect = 6e-55
Identities = 63/306 (20%), Positives = 114/306 (37%), Gaps = 48/306 (15%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
+ +LL +LG+G + V + K A KV N + + RE+
Sbjct: 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKV--FNNI-SFLRPVDVQM---REFE 59
Query: 344 IHKALDHPRVVKLYDVFE-IDANSFCTVLEYCDGHDLDFYLKQHKTIA---EREARSIVM 399
+ K L+H +VKL+ + E ++E+C L L++ E E ++
Sbjct: 60 VLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR 119
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEG-NVCGEIKITDFGLSKVMDEENYNPDHGM 458
VV + +L E ++H ++KPGNI+ G + K+TDFG ++ +++
Sbjct: 120 DVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED-------DE 170
Query: 459 DLTSQGAGTYWYLPPE----CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF---GHN 511
S GT YL P+ + + K + VD+WS+GV FY G PF
Sbjct: 171 QFVSL-YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229
Query: 512 QSQATILEENTILKATEVQFANK--------------------PTVSNEAKGFIRSCLAY 551
+ ++ + K + + + + + L
Sbjct: 230 RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEA 289
Query: 552 RKEDRI 557
+E
Sbjct: 290 DQEKCW 295
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 188 bits (480), Expect = 6e-55
Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 27/291 (9%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHAL-REYN 343
+ D Y + LG G F+ V K + A K + K + + + RE +
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKF--IKKRQSRASRRGVSREEIEREVS 67
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDF-YLKQHKTIAEREARSIVMQVV 402
I + + H V+ L+DV+E + +LE G +L F +L Q ++++E EA S + Q++
Sbjct: 68 ILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGEL-FDFLAQKESLSEEEATSFIKQIL 125
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNV-CGEIKITDFGLSKVMDEENYNPDHGMDLT 461
+ YL+ K + H+DLKP NI+L + N+ IK+ DFGL+ +++
Sbjct: 126 DGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG--------VEF 175
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEEN 521
GT ++ PE +V P + + D+WS+GVI Y L G PF ++ L
Sbjct: 176 KNIFGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPF-LGDTKQETLAN- 229
Query: 522 TILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQP 570
I F + S AK FIR L R+ + RH ++ P
Sbjct: 230 -ITSV-SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 192 bits (491), Expect = 8e-55
Identities = 95/287 (33%), Positives = 136/287 (47%), Gaps = 26/287 (9%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
SDRY +LGKG F EV D + A KV ++K ++ K+ + LRE +
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKV--ISK--RQVKQKTDKESLLREVQL 79
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSA 404
K LDHP ++KLY+ FE D F V E G +L + K +E +A I+ QV+S
Sbjct: 80 LKQLDHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 138
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
+ Y+++ K ++H DLKP N+LL + I+I DFGLS +
Sbjct: 139 ITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--------KKMKDK 188
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
GT +Y+ PE V+ K DVWS GVI Y L G PF + ++ IL++ +
Sbjct: 189 IGTAYYIAPE--VLHGT---YDEKCDVWSTGVILYILLSGCPPF-NGANEYDILKK--VE 240
Query: 525 KATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
K + F VS AK IR L Y RI H+++Q
Sbjct: 241 KG-KYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 286
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 186 bits (476), Expect = 9e-55
Identities = 86/295 (29%), Positives = 135/295 (45%), Gaps = 28/295 (9%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+ + + LLGKG F+ V++A + VA K+ ++K K KA ++ E IH
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKM--IDK--KAMYKAGMVQRVQNEVKIHC 66
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH-KTIAEREARSIVMQVVSAL 405
L HP +++LY+ FE D+N VLE C +++ YLK K +E EAR + Q+++ +
Sbjct: 67 QLKHPSILELYNYFE-DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM 125
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
YL+ ++H DL N+LLT IKI DFGL+ + H T
Sbjct: 126 LYLHSHG--ILHRDLTLSNLLLTRN---MNIKIADFGLATQLK-----MPHEKHYTL--C 173
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
GT Y+ PE + ++ + DVWS+G +FY L G+ PF + L K
Sbjct: 174 GTPNYISPE--IATRSA--HGLESDVWSLGCMFYTLLIGRPPF-DTDTVKNTLN-----K 223
Query: 526 ATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKHGRQSA 580
+ +S EAK I L DR+ + S+ H ++ +
Sbjct: 224 VVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDEG 278
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 187 bits (477), Expect = 9e-55
Identities = 66/303 (21%), Positives = 121/303 (39%), Gaps = 43/303 (14%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+ + LG+GGF V +A + + A K +L +K +RE
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREK------VMREVKALA 58
Query: 347 ALDHPRVVKLYDVFEIDANSF-----------CTVLEYCDGHDLDFYLKQHKTIAEREAR 395
L+HP +V+ ++ + + ++ C +L ++ TI ERE
Sbjct: 59 KLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERS 118
Query: 396 SIV---MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEEN- 451
+ +Q+ A+++L+ ++H DLKP NI T +K+ DFGL MD++
Sbjct: 119 VCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMD---DVVKVGDFGLVTAMDQDEE 173
Query: 452 ----YNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKP 507
P + GT Y+ PE + N S KVD++S+G+I ++ LY P
Sbjct: 174 EQTVLTPMPAYARHTGQVGTKLYMSPE--QIHGNS--YSHKVDIFSLGLILFELLY---P 226
Query: 508 FGHNQSQATILEENTILKATEVQFANKPT-VSNEAKGFIRSCLAYRKEDRIDVISLARHD 566
F + L ++F T ++ L+ +R + I++ +
Sbjct: 227 FSTQMERVRTLT-----DVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENA 281
Query: 567 YLQ 569
+
Sbjct: 282 VFE 284
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 189 bits (483), Expect = 1e-54
Identities = 78/322 (24%), Positives = 138/322 (42%), Gaps = 40/322 (12%)
Query: 264 HIRELKRIHNEDQSRFNNHPV------LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVAC 317
I + + + + ++ PV + D Y +L LG G F VH+ + R
Sbjct: 22 KINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVA 81
Query: 318 KVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGH 377
K +N + DK E +I L HP+++ L+D FE D +LE+ G
Sbjct: 82 KF--INTPYPLDKYT-----VKNEISIMNQLHHPKLINLHDAFE-DKYEMVLILEFLSGG 133
Query: 378 DL-DFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLT--EGNVCG 434
+L D + ++E E + + Q LK+++E ++H D+KP NI+ + +
Sbjct: 134 ELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS--IVHLDIKPENIMCETKKAS--- 188
Query: 435 EIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSV 494
+KI DFGL+ ++ + + T + PE +V + P + D+W++
Sbjct: 189 SVKIIDFGLATKLNPDE--------IVKVTTATAEFAAPE--IVDREP--VGFYTDMWAI 236
Query: 495 GVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYR 552
GV+ Y L G PF + L+ + + + +F +VS EAK FI++ L
Sbjct: 237 GVLGYVLLSGLSPF-AGEDDLETLQN--VKRC-DWEFDEDAFSSVSPEAKDFIKNLLQKE 292
Query: 553 KEDRIDVISLARHDYLQPPVPK 574
R+ V H +L+
Sbjct: 293 PRKRLTVHDALEHPWLKGDHSN 314
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 188 bits (479), Expect = 2e-54
Identities = 80/327 (24%), Positives = 132/327 (40%), Gaps = 57/327 (17%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
L +Y L +G+G + V A + + + A K+ +NK+ ++ E +
Sbjct: 24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKI--MNKNKIRQINPKDVERIKTEVRL 81
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL------------------------- 379
K L HP + +LY+V+E D C V+E C G L
Sbjct: 82 MKKLHHPNIARLYEVYE-DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQIC 140
Query: 380 ---------------DFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGN 424
F E+ +I+ Q+ SAL YL+ + H D+KP N
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG--ICHRDIKPEN 198
Query: 425 ILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPK 484
L + EIK+ DFGLSK + N +GM + AGT +++ PE V+
Sbjct: 199 FLFSTNK-SFEIKLVDFGLSKEFYKLNNGEYYGM---TTKAGTPYFVAPE--VLNTTNES 252
Query: 485 ISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKP--TVSNEAK 542
K D WS GV+ + L G PF + A + + +L ++ F N +S A+
Sbjct: 253 YGPKCDAWSAGVLLHLLLMGAVPF-PGVNDADTISQ--VLNK-KLCFENPNYNVLSPLAR 308
Query: 543 GFIRSCLAYRKEDRIDVISLARHDYLQ 569
+ + L ++R D + +H ++
Sbjct: 309 DLLSNLLNRNVDERFDAMRALQHPWIS 335
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 191 bits (488), Expect = 3e-54
Identities = 86/275 (31%), Positives = 124/275 (45%), Gaps = 27/275 (9%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
LS+ Y + LG G + EV D A K+ + L E +
Sbjct: 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK-----LLEEVAV 89
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSA 404
K LDHP ++KLYD FE D ++ V+E G +L + E +A I+ QV+S
Sbjct: 90 LKLLDHPNIMKLYDFFE-DKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSG 148
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
+ YL++ ++H DLKP N+LL IKI DFGLS V + + +
Sbjct: 149 VTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ--------KKMKER 198
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
GT +Y+ PE V+ K K DVWS+GVI + L G PF Q+ IL + +
Sbjct: 199 LGTAYYIAPE--VLRKK---YDEKCDVWSIGVILFILLAGYPPF-GGQTDQEILRK--VE 250
Query: 525 KATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
K + F + VS AK I+ L + + RI
Sbjct: 251 KG-KYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRI 284
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 187 bits (476), Expect = 3e-54
Identities = 79/291 (27%), Positives = 136/291 (46%), Gaps = 27/291 (9%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHAL-REYN 343
+ D Y LG G F+ V K + A K + K + + + + RE +
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKF--IKKRRTKSSRRGVSREDIEREVS 66
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDF-YLKQHKTIAEREARSIVMQVV 402
I K + HP V+ L++V+E + +LE G +L F +L + +++ E EA + Q++
Sbjct: 67 ILKEIQHPNVITLHEVYE-NKTDVILILELVAGGEL-FDFLAEKESLTEEEATEFLKQIL 124
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCG-EIKITDFGLSKVMDEENYNPDHGMDLT 461
+ + YL+ ++ + H+DLKP NI+L + NV IKI DFGL+ + +
Sbjct: 125 NGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK-----IDFGNEF--- 174
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEEN 521
GT ++ PE +V P + + D+WS+GVI Y L G PF ++ L
Sbjct: 175 KNIFGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPF-LGDTKQETLAN- 228
Query: 522 TILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQP 570
+ +F ++ S AK FIR L + R+ + +H +++P
Sbjct: 229 -VSAV-NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 184 bits (470), Expect = 6e-54
Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 26/275 (9%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
SD Y + LGKG FS V + A K+ +N + ++ RE I
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI--INTKKLSARDFQKLE---REARI 58
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSA 404
+ L HP +V+L+D + + + V + G +L + + +E +A + Q++ +
Sbjct: 59 CRKLQHPNIVRLHDSIQ-EESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES 117
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
+ Y + ++H +LKP N+LL +K+ DFGL+ +++ +
Sbjct: 118 IAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS--------EAWHGF 167
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
AGT YL PE V+ K+P S VD+W+ GVI Y L G PF ++ Q + + I
Sbjct: 168 AGTPGYLSPE--VLKKDP--YSKPVDIWACGVILYILLVGYPPF-WDEDQHRLYAQ--IK 220
Query: 525 KATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
+ + TV+ EAK I S L + RI
Sbjct: 221 AG-AYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 187 bits (476), Expect = 6e-54
Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 27/291 (9%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHAL-REYN 343
+ D Y + LG G F+ V K + A K + K + + + RE +
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKF--IKKRQSRASRRGVCREEIEREVS 67
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDF-YLKQHKTIAEREARSIVMQVV 402
I + + HP ++ L+DV+E + +LE G +L F +L Q ++++E EA S + Q++
Sbjct: 68 ILRQVLHPNIITLHDVYE-NRTDVVLILELVSGGEL-FDFLAQKESLSEEEATSFIKQIL 125
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNV-CGEIKITDFGLSKVMDEENYNPDHGMDLT 461
+ YL+ K + H+DLKP NI+L + N+ IK+ DFGL+ +++
Sbjct: 126 DGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG--------VEF 175
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEEN 521
GT ++ PE +V P + + D+WS+GVI Y L G PF ++ L
Sbjct: 176 KNIFGTPEFVAPE--IVNYEP--LGLEADMWSIGVITYILLSGASPF-LGDTKQETLAN- 229
Query: 522 TILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQP 570
I F + S AK FIR L R+ + RH ++ P
Sbjct: 230 -ITAV-SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 184 bits (469), Expect = 7e-54
Identities = 75/275 (27%), Positives = 119/275 (43%), Gaps = 29/275 (10%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
++ Y L +G+G + EV A + A K + K + +E I
Sbjct: 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKK--IPK-----YFVEDVDRFKQEIEI 59
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSA 404
K+LDHP +++LY+ FE D V+E C G +L + + E +A I+ V+SA
Sbjct: 60 MKSLDHPNIIRLYETFE-DNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA 118
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
+ Y +++ V H DLKP N L + +K+ DFGL+ P M
Sbjct: 119 VAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-----PGKMM---RTK 168
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
GT +Y+ P+ V+ + D WS GV+ Y L G PF + + ++ + I
Sbjct: 169 VGTPYYVSPQ--VLEG---LYGPECDEWSAGVMMYVLLCGYPPF-SAPTDSEVMLK--IR 220
Query: 525 KATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
+ F K VS +A+ IR L + RI
Sbjct: 221 EG-TFTFPEKDWLNVSPQAESLIRRLLTKSPKQRI 254
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 184 bits (469), Expect = 8e-54
Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 31/278 (11%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
+ D ++ LG G F +VH + K +NKD + ++ E +
Sbjct: 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKT--INKD----RSQVPMEQIEAEIEV 73
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DF---YLKQHKTIAEREARSIVMQ 400
K+LDHP ++K+++VFE D ++ V+E C+G +L + + K ++E ++ Q
Sbjct: 74 LKSLDHPNIIKIFEVFE-DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQ 132
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+++AL Y + V+H DLKP NIL + + IKI DFGL+++ D
Sbjct: 133 MMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK-----SDEHS-- 183
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
+ AGT Y+ PE V + ++ K D+WS GV+ Y L G PF S + ++
Sbjct: 184 -TNAAGTALYMAPE--VFKR---DVTFKCDIWSAGVVMYFLLTGCLPF-TGTSLEEVQQK 236
Query: 521 NTILKATEVQFANKP-TVSNEAKGFIRSCLAYRKEDRI 557
E +A + ++ +A ++ L E R
Sbjct: 237 --ATYK-EPNYAVECRPLTPQAVDLLKQMLTKDPERRP 271
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 183 bits (468), Expect = 1e-53
Identities = 85/299 (28%), Positives = 129/299 (43%), Gaps = 33/299 (11%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+ + + LGKG F V+ A + + + +A KV L K + +KA RE I
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKV--LFK--AQLEKAGVEHQLRREVEIQS 64
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
L HP +++LY F + +LEY + L++ E+ + + ++ +AL
Sbjct: 65 HLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
Y + + VIH D+KP N+LL GE+KI DFG S + P G
Sbjct: 124 YCHSKR--VIHRDIKPENLLLGSA---GELKIADFGWSV------HAPSSRRT-DL--CG 169
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKA 526
T YLPPE ++ KVD+WS+GV+ Y+ L GK PF N Q T I +
Sbjct: 170 TLDYLPPE--MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY---KRISRV 222
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARH----DYLQPPVPKHGRQSAS 581
E F V+ A+ I L + R + + H P ++SAS
Sbjct: 223 -EFTFP--DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESAS 278
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 184 bits (469), Expect = 2e-53
Identities = 78/276 (28%), Positives = 125/276 (45%), Gaps = 31/276 (11%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
+ ++ + +LG G FSEV + A K + K + E +
Sbjct: 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKC--IKKSPAFRDSS-----LENEIAV 59
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDF-YLKQHKTIAEREARSIVMQVVS 403
K + H +V L D++E + V++ G +L F + + E++A ++ QV+S
Sbjct: 60 LKKIKHENIVTLEDIYE-STTHYYLVMQLVSGGEL-FDRILERGVYTEKDASLVIQQVLS 117
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
A+KYL+E ++H DLKP N+L +I ITDFGLSK+ S
Sbjct: 118 AVKYLHENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM---------ST 166
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTI 523
GT Y+ PE V+ + P S VD WS+GVI Y L G PF + ++++ + E+ I
Sbjct: 167 ACGTPGYVAPE--VLAQKP--YSKAVDCWSIGVITYILLCGYPPF-YEETESKLFEK--I 219
Query: 524 LKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
+ +F + +S AK FI L +R
Sbjct: 220 KEG-YYEFESPFWDDISESAKDFICHLLEKDPNERY 254
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 185 bits (472), Expect = 3e-53
Identities = 82/280 (29%), Positives = 128/280 (45%), Gaps = 32/280 (11%)
Query: 285 LSDRYLL--LMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREY 342
++ Y + +LG G F +VHK + +A K+ + +DK+ E
Sbjct: 85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKI--IKTRGMKDKE-----EVKNEI 137
Query: 343 NIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQV 401
++ LDH +++LYD FE N V+EY DG +L D + + + E + + Q+
Sbjct: 138 SVMNQLDHANLIQLYDAFE-SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQI 196
Query: 402 VSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLT 461
+++++++ ++H DLKP NIL + +IKI DFGL++ Y P +
Sbjct: 197 CEGIRHMHQMY--ILHLDLKPENILCVNRDA-KQIKIIDFGLARR-----YKPREKL--- 245
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEEN 521
GT +L PE VV + +S D+WSVGVI Y L G PF + A L
Sbjct: 246 KVNFGTPEFLAPE--VVNYDF--VSFPTDMWSVGVIAYMLLSGLSPF-LGDNDAETLNN- 299
Query: 522 TILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDV 559
IL ++ +S EAK FI L K RI
Sbjct: 300 -ILAC-RWDLEDEEFQDISEEAKEFISKLLIKEKSWRISA 337
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 184 bits (469), Expect = 5e-53
Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 27/286 (9%)
Query: 278 RFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKH 337
++ + D Y L ++GKG FS V + + + + A K+ ++ +
Sbjct: 15 MADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKI--VDVAKFTSSPGLSTED 72
Query: 338 ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA----ERE 393
RE +I L HP +V+L + + V E+ DG DL F + + E
Sbjct: 73 LKREASICHMLKHPHIVELLETYS-SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 131
Query: 394 ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
A + Q++ AL+Y ++ +IH D+KP +LL +K+ FG++ + E
Sbjct: 132 ASHYMRQILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG-- 187
Query: 454 PDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQS 513
+ GT ++ PE VV + P VDVW GVI + L G PF +
Sbjct: 188 -----LVAGGRVGTPHFMAPE--VVKREP--YGKPVDVWGCGVILFILLSGCLPFYGTKE 238
Query: 514 QATILEENTILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
+ + E I+K + + + +S AK +R L +RI
Sbjct: 239 R--LFEG--IIKG-KYKMNPRQWSHISESAKDLVRRMLMLDPAERI 279
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 185 bits (471), Expect = 7e-53
Identities = 63/306 (20%), Positives = 114/306 (37%), Gaps = 48/306 (15%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
+ +LL +LG+G + V + K A KV N + + RE+
Sbjct: 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKV--FNNI-SFLRPVDVQM---REFE 59
Query: 344 IHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIA---EREARSIVM 399
+ K L+H +VKL+ + E ++E+C L L++ E E ++
Sbjct: 60 VLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR 119
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEG-NVCGEIKITDFGLSKVMDEENYNPDHGM 458
VV + +L E ++H ++KPGNI+ G + K+TDFG ++ +++
Sbjct: 120 DVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED-------DE 170
Query: 459 DLTSQGAGTYWYLPPE----CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF---GHN 511
S GT YL P+ + + K + VD+WS+GV FY G PF
Sbjct: 171 QFVSL-YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229
Query: 512 QSQATILEENTILKATEVQFANK--------------------PTVSNEAKGFIRSCLAY 551
+ ++ + K + + + + + L
Sbjct: 230 RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEA 289
Query: 552 RKEDRI 557
+E
Sbjct: 290 DQEKCW 295
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 189 bits (481), Expect = 1e-52
Identities = 87/374 (23%), Positives = 139/374 (37%), Gaps = 43/374 (11%)
Query: 226 RERNLHIR-------ELKRIHNEDQSRFNNHPVLSDSYLIGYKNLHIRELKRIHNEDQSR 278
N H + I +++ R + V ++ K + +
Sbjct: 83 IAENKHGQSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQ 142
Query: 279 FNNHPV------LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKA 332
+ PV + D Y + LG G F VH+ + A K + + DK+
Sbjct: 143 YYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKF--VMTPHESDKET 200
Query: 333 NYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAE 391
+E L HP +V L+D FE D N + E+ G +L + +H ++E
Sbjct: 201 -----VRKEIQTMSVLRHPTLVNLHDAFE-DDNEMVMIYEFMSGGELFEKVADEHNKMSE 254
Query: 392 REARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEEN 451
EA + QV L +++E +H DLKP NI+ T E+K+ DFGL+
Sbjct: 255 DEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRS-NELKLIDFGLTAH----- 306
Query: 452 YNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHN 511
+P + GT + PE V P + D+WSVGV+ Y L G PF
Sbjct: 307 LDPKQSV---KVTTGTAEFAAPE--VAEGKP--VGYYTDMWSVGVLSYILLSGLSPF-GG 358
Query: 512 QSQATILEENTILKATEVQFANK--PTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
++ L + + + +S + K FIR L R+ + H +L
Sbjct: 359 ENDDETLRN--VKSC-DWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 415
Query: 570 PPVPKHGRQSASSS 583
P SS
Sbjct: 416 PGNAPGRDSQIPSS 429
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 183 bits (467), Expect = 2e-52
Identities = 76/275 (27%), Positives = 122/275 (44%), Gaps = 26/275 (9%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
SD Y + LGKG FS V + A K+ K D + RE I
Sbjct: 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-----LEREARI 81
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSA 404
+ L HP +V+L+D + + + V + G +L + + +E +A + Q++ +
Sbjct: 82 CRKLQHPNIVRLHDSIQ-EESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES 140
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
+ Y + ++H +LKP N+LL +K+ DFGL+ +++ +
Sbjct: 141 IAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS--------EAWHGF 190
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
AGT YL PE V+ K+P S VD+W+ GVI Y L G PF ++ Q + + I
Sbjct: 191 AGTPGYLSPE--VLKKDP--YSKPVDIWACGVILYILLVGYPPF-WDEDQHRLYAQ--IK 243
Query: 525 KATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
+ + TV+ EAK I S L + RI
Sbjct: 244 AG-AYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI 277
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 184 bits (469), Expect = 3e-52
Identities = 65/314 (20%), Positives = 118/314 (37%), Gaps = 28/314 (8%)
Query: 266 RELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKD 325
++ + V + +LG G + + + R VA K ++ +
Sbjct: 3 SSPSLEQDDGDEETSVVIVGKISFCPKDVLGHGAEGTIVYR-GMFDNRDVAVK--RILPE 59
Query: 326 WKEDKKANYIKHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK 384
A RE + + D HP V++ + + D +E C ++ +
Sbjct: 60 --------CFSFADREVQLLRESDEHPNVIRYFCTEK-DRQFQYIAIELCAATLQEYVEQ 110
Query: 385 QHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGE--IKITDFG 442
+ E +++ Q S L +L+ + ++H DLKP NIL++ N G+ I+DFG
Sbjct: 111 KDFAHLGLEPITLLQQTTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFG 168
Query: 443 LSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
L K + ++ S GT ++ PE + + VD++S G +FY +
Sbjct: 169 LCKKLAVGRHS----FSRRSGVPGTEGWIAPEM-LSEDCKENPTYTVDIFSAGCVFYYVI 223
Query: 503 -YGKKPFGH-NQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVI 560
G PFG Q QA IL L + A+ I +A + R
Sbjct: 224 SEGSHPFGKSLQRQANILLGACSLDCLH----PEKHEDVIARELIEKMIAMDPQKRPSAK 279
Query: 561 SLARHDYLQPPVPK 574
+ +H + +
Sbjct: 280 HVLKHPFFWSLEKQ 293
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 184 bits (470), Expect = 3e-52
Identities = 74/275 (26%), Positives = 120/275 (43%), Gaps = 25/275 (9%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
++ Y L LGKG FS V + + + A + K D + RE I
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQK-----LEREARI 63
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSA 404
+ L HP +V+L+D + + + G +L + + +E +A + Q++ A
Sbjct: 64 CRLLKHPNIVRLHDSIS-EEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA 122
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
+ + +++ V+H +LKP N+LL +K+ DFGL+ ++ E
Sbjct: 123 VLHCHQMG--VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-------QAWFGF 173
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
AGT YL PE V+ K+P VD+W+ GVI Y L G PF ++ Q + ++ I
Sbjct: 174 AGTPGYLSPE--VLRKDP--YGKPVDLWACGVILYILLVGYPPF-WDEDQHRLYQQ--IK 226
Query: 525 KATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
F + TV+ EAK I L RI
Sbjct: 227 AG-AYDFPSPEWDTVTPEAKDLINKMLTINPSKRI 260
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 186 bits (474), Expect = 4e-52
Identities = 88/281 (31%), Positives = 130/281 (46%), Gaps = 28/281 (9%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKANYIKHA--- 338
+ + Y + LG G + EV + A KV Q +K D N K
Sbjct: 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEI 93
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
E ++ K+LDHP ++KL+DVFE D F V E+ +G +L + E +A +I+
Sbjct: 94 YNEISLLKSLDHPNIIKLFDVFE-DKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIM 152
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGM 458
Q++S + YL++ ++H D+KP NILL N IKI DFGLS ++
Sbjct: 153 KQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD-------- 202
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
GT +Y+ PE V+ K + K DVWS GVI Y L G PF Q+ I+
Sbjct: 203 YKLRDRLGTAYYIAPE--VLKKK---YNEKCDVWSCGVIMYILLCGYPPF-GGQNDQDII 256
Query: 519 EENTILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
++ + K + F +S+EAK I+ L Y R
Sbjct: 257 KK--VEKG-KYYFDFNDWKNISDEAKELIKLMLTYDYNKRC 294
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 184 bits (468), Expect = 5e-52
Identities = 74/312 (23%), Positives = 124/312 (39%), Gaps = 41/312 (13%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
L + + +LG G V + R VA K + D + AL E +
Sbjct: 13 LKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKR--MLID--------FCDIALMEIKL 61
Query: 345 HKALD-HPRVVKLYDVFEIDANSFCTVLEYCDG--HDL----DFYLKQHKTIAEREARSI 397
D HP V++ Y LE C+ DL + + K E S+
Sbjct: 62 LTESDDHPNVIRYYCSET-TDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISL 120
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGE----------IKITDFGLSKVM 447
+ Q+ S + +L+ +K +IH DLKP NIL++ + I I+DFGL K +
Sbjct: 121 LRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 448 DEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPP---KISSKVDVWSVGVIFYQCL-Y 503
D + + + +GT + PE N +++ +D++S+G +FY L
Sbjct: 179 DSGQSSFRTNL---NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 504 GKKPFGH-NQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISL 562
GK PFG ++ I+ I E++ + ++ EA I + + R + +
Sbjct: 236 GKHPFGDKYSRESNII--RGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293
Query: 563 ARHDYLQPPVPK 574
RH P K
Sbjct: 294 LRHPLFWPKSKK 305
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 179 bits (457), Expect = 8e-52
Identities = 59/343 (17%), Positives = 110/343 (32%), Gaps = 41/343 (11%)
Query: 238 IHNEDQSRFNNHPVLSDSYLIGYKNLHIREL-------KRIHNEDQSRFNNHPVLSDRYL 290
+H+ + Y L R + + + + +
Sbjct: 1 MHHHHHHSSGVDLGTENLYFQSMHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQ 60
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL-D 349
L LG G + EV K ++ R A K + ++ K L E H+ +
Sbjct: 61 RLSRLGHGSYGEVFKVRSKEDGRLYAVK--RSMSPFRGPKD---RARKLAEVGSHEKVGQ 115
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH-KTIAEREARSIVMQVVSALKYL 408
HP V+L +E + E C L + + ++ E + + + AL +L
Sbjct: 116 HPCCVRLEQAWE-EGGILYLQTELCGP-SLQQHCEAWGASLPEAQVWGYLRDTLLALAHL 173
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+ ++H D+KP NI L G K+ DFGL + G
Sbjct: 174 HSQG--LVHLDVKPANIFLGPR---GRCKLGDFGLLVELGT--------AGAGEVQEGDP 220
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATE 528
Y+ PE + + + DV+S+G+ + + + + L
Sbjct: 221 RYMAPE---LLQGSY--GTAADVFSLGLTILEVACNMELPHGGEGWQQLR--QGYLPPE- 272
Query: 529 VQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPP 571
+S+E + + L + R +L L+ P
Sbjct: 273 ----FTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQP 311
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 180 bits (458), Expect = 1e-51
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 30/279 (10%)
Query: 285 LSDRYLLLM-LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
++ Y+L LG+G F+ V + + A K + + ++ + L E
Sbjct: 26 FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAE-----ILHEIA 80
Query: 344 IHKALDH-PRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYL-KQHKTIAEREARSIVMQ 400
+ + PRV+ L++V+E + + +LEY G ++ L + + ++E + ++ Q
Sbjct: 81 VLELAKSCPRVINLHEVYE-NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQ 139
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
++ + YL++ ++H DLKP NILL+ G+IKI DFG+S+ +
Sbjct: 140 ILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC--------E 189
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
+ GT YL PE ++ +P I++ D+W++G+I Y L PF +
Sbjct: 190 LREIMGTPEYLAPE--ILNYDP--ITTATDMWNIGIIAYMLLTHTSPFVG-EDNQETYLN 244
Query: 521 NTILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
I + V ++ + +VS A FI+S L E R
Sbjct: 245 --ISQV-NVDYSEETFSSVSQLATDFIQSLLVKNPEKRP 280
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 178 bits (455), Expect = 1e-51
Identities = 75/281 (26%), Positives = 122/281 (43%), Gaps = 27/281 (9%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA--LREY 342
+ Y +LG+G S V + + A K+ + + L+E
Sbjct: 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 74
Query: 343 NIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDF-YLKQHKTIAEREARSIVMQ 400
+I + + HP +++L D +E F V + +L F YL + T++E+E R I+
Sbjct: 75 DILRKVSGHPNIIQLKDTYE-TNTFFFLVFDLMKKGEL-FDYLTEKVTLSEKETRKIMRA 132
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
++ + L+++ ++H DLKP NILL + IK+TDFG S +D +
Sbjct: 133 LLEVICALHKLN--IVHRDLKPENILLDDD---MNIKLTDFGFSCQLDPG--------EK 179
Query: 461 TSQGAGTYWYLPPE--CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
+ GT YL PE + N P +VD+WS GVI Y L G PF H + Q +L
Sbjct: 180 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH-RKQMLML 238
Query: 519 EENTILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
I+ QF + S+ K + L + + R
Sbjct: 239 RM--IMSG-NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY 276
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 178 bits (453), Expect = 3e-51
Identities = 75/294 (25%), Positives = 126/294 (42%), Gaps = 31/294 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+ + +G+G FSEV++A L + VA K Q+ +A+ ++E ++ K
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARAD----CIKEIDLLK 87
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK----TIAEREARSIVMQVV 402
L+HP V+K Y F I+ N VLE D DL +K K I ER +Q+
Sbjct: 88 QLNHPNVIKYYASF-IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC 146
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
SAL++++ + V+H D+KP N+ +T G +K+ D GL +
Sbjct: 147 SALEHMHSRR--VMHRDIKPANVFITAT---GVVKLGDLGLGRFF-------SSKTTAAH 194
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENT 522
GT +Y+ PE + +N + K D+WS+G + Y+ + PF ++ L
Sbjct: 195 SLVGTPYYMSPE--RIHENG--YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL---- 246
Query: 523 ILKATEVQFANKPT--VSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPK 574
K + + P+ S E + + C+ E R DV +
Sbjct: 247 CKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 179 bits (455), Expect = 5e-51
Identities = 84/281 (29%), Positives = 126/281 (44%), Gaps = 31/281 (11%)
Query: 280 NNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHAL 339
+N LSD + + LG+G S V++ Q+ A KV L K DKK
Sbjct: 46 SNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKV--LKK--TVDKKI-----VR 96
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDF-YLKQHKTIAEREARSIV 398
E + L HP ++KL ++FE VLE G +L F + + +ER+A V
Sbjct: 97 TEIGVLLRLSHPNIIKLKEIFE-TPTEISLVLELVTGGEL-FDRIVEKGYYSERDAADAV 154
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGM 458
Q++ A+ YL+E ++H DLKP N+L +KI DFGLSK+++ +
Sbjct: 155 KQILEAVAYLHENG--IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ-------- 204
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
L GT Y PE ++ +VD+WSVG+I Y L G +PF + +
Sbjct: 205 VLMKTVCGTPGYCAPE--ILRGCA--YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF 260
Query: 519 EENTILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
IL E F + VS AK +R + + R+
Sbjct: 261 RR--ILNC-EYYFISPWWDEVSLNAKDLVRKLIVLDPKKRL 298
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 177 bits (452), Expect = 1e-50
Identities = 75/312 (24%), Positives = 128/312 (41%), Gaps = 42/312 (13%)
Query: 261 KNLHIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVH 320
+ + + + + + + +F +D Y + +G G +S + A K+
Sbjct: 2 QTVGVHSIVQQLHRNSIQF------TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKI- 54
Query: 321 QLNKDWKEDKKANYIKHALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL 379
++K K D E I + HP ++ L DV++ D V E G +L
Sbjct: 55 -IDKS-KRDPT--------EEIEILLRYGQHPNIITLKDVYD-DGKYVYVVTELMKGGEL 103
Query: 380 DF-YLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILL-TEGNVCGEIK 437
+ + K +EREA +++ + ++YL+ V+H DLKP NIL E I+
Sbjct: 104 -LDKILRQKFFSEREASAVLFTITKTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIR 160
Query: 438 ITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVI 497
I DFG +K + EN L T ++ PE V+ + + D+WS+GV+
Sbjct: 161 ICDFGFAKQLRAEN-------GLLMTPCYTANFVAPE--VLERQG--YDAACDIWSLGVL 209
Query: 498 FYQCLYGKKPF--GHNQSQATILEENTILKATEVQFANKP--TVSNEAKGFIRSCLAYRK 553
Y L G PF G + + IL I + + +VS+ AK + L
Sbjct: 210 LYTMLTGYTPFANGPDDTPEEILAR--IGSG-KFSLSGGYWNSVSDTAKDLVSKMLHVDP 266
Query: 554 EDRIDVISLARH 565
R+ + RH
Sbjct: 267 HQRLTAALVLRH 278
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 175 bits (446), Expect = 4e-50
Identities = 73/308 (23%), Positives = 114/308 (37%), Gaps = 30/308 (9%)
Query: 285 LSDRYLLL-MLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
D Y L +LG+G + V +L + A K+ + K + RE
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKI--IEKQPGHIRS-----RVFREVE 62
Query: 344 IHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ H V++L + FE + + F V E G + ++ + + E EA +V V
Sbjct: 63 MLYQCQGHRNVLELIEFFE-EEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVA 121
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
SAL +L+ + H DLKP NIL N +KI DF L +
Sbjct: 122 SALDFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELL 179
Query: 463 QGAGTYWYLPPECFVVGKNPPKISS---KVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
G+ Y+ PE VV + S + D+WS+GVI Y L G PF +
Sbjct: 180 TPCGSAEYMAPE--VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD 237
Query: 520 ENTILKATEVQFANK-------------PTVSNEAKGFIRSCLAYRKEDRIDVISLARHD 566
A + +S AK I L + R+ + +H
Sbjct: 238 RGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP 297
Query: 567 YLQPPVPK 574
++Q P+
Sbjct: 298 WVQGCAPE 305
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 174 bits (443), Expect = 5e-50
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 37/296 (12%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
D + + LGKG F V+ A + + + +A KV L K + +K RE I
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKV--LFK--SQLEKEGVEHQLRREIEIQS 69
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
L HP ++++Y+ F D +LE+ +L L++H E+ + + + ++ AL
Sbjct: 70 HLRHPNILRMYNYFH-DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALH 128
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
Y +E K VIH D+KP N+L+ GE+KI DFG S G
Sbjct: 129 YCHERK--VIHRDIKPENLLMGYK---GELKIADFGWSVHAPSL---------RRRTMCG 174
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKA 526
T YLPPE ++ KVD+W GV+ Y+ L G PF + S I+
Sbjct: 175 TLDYLPPE--MIEGKT--HDEKVDLWCAGVLCYEFLVGMPPF-DSPSHTETHRR--IVNV 227
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARH--------DYLQPPVPK 574
+++F P +S+ +K I L Y R+ + + H L P
Sbjct: 228 -DLKFP--PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQS 280
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 174 bits (444), Expect = 9e-50
Identities = 91/347 (26%), Positives = 145/347 (41%), Gaps = 51/347 (14%)
Query: 285 LSDRYLLLML---LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
Y L + LG+G FS K K + A K+ ++K + + + +E
Sbjct: 6 FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKI--ISKRMEANTQ--------KE 55
Query: 342 YNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
K + HP +VKL++VF D V+E +G +L +K+ K +E EA I+ +
Sbjct: 56 ITALKLCEGHPNIVKLHEVFH-DQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRK 114
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
+VSA+ +++++ V+H DLKP N+L T+ N EIKI DFG +++ +N
Sbjct: 115 LVSAVSHMHDVG--VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-------QP 165
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
T Y PE ++ +N D+WS+GVI Y L G+ PF + T
Sbjct: 166 LKTPCFTLHYAAPE--LLNQNG--YDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSA 221
Query: 521 NTILKAT---EVQFANKP--TVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
I+K + F + VS EAK I+ L R+ + L +++LQ
Sbjct: 222 VEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQ------ 275
Query: 576 GRQSASSSAPVGHSPASSGQNQNSGGASTQSSAVQQSFATGLFSGMN 622
S SS + +AV F N
Sbjct: 276 -----------DGSQLSSNPLMTPDILGSSGAAVHTCVKAT-FHAFN 310
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 176 bits (447), Expect = 1e-49
Identities = 69/280 (24%), Positives = 127/280 (45%), Gaps = 26/280 (9%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNK-DWKEDKKANYIKHALREYN 343
+Y ++G+G S V + A K+ ++ ++ + RE +
Sbjct: 92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETH 151
Query: 344 IHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDF-YLKQHKTIAEREARSIVMQV 401
I + + HP ++ L D +E ++ V + +L F YL + ++E+E RSI+ +
Sbjct: 152 ILRQVAGHPHIITLIDSYE-SSSFMFLVFDLMRKGEL-FDYLTEKVALSEKETRSIMRSL 209
Query: 402 VSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLT 461
+ A+ +L+ ++H DLKP NILL + +I+++DFG S ++ +
Sbjct: 210 LEAVSFLHANN--IVHRDLKPENILLDDN---MQIRLSDFGFSCHLEPG--------EKL 256
Query: 462 SQGAGTYWYLPPE--CFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
+ GT YL PE + + P +VD+W+ GVI + L G PF ++ Q +L
Sbjct: 257 RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF-WHRRQILMLR 315
Query: 520 ENTILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
I++ + QF++ S+ K I L E R+
Sbjct: 316 M--IMEG-QYQFSSPEWDDRSSTVKDLISRLLQVDPEARL 352
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 174 bits (442), Expect = 2e-49
Identities = 75/336 (22%), Positives = 132/336 (39%), Gaps = 53/336 (15%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
+ R + +L +GGF+ V++A D+ R A K +L + +E +A ++E
Sbjct: 25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALK--RLLSNEEEKNRA-----IIQEVC 77
Query: 344 IHKAL-DHPRVVKLYDVFEIDANS-------FCTVLEYCDGHDLDFYLK--QHKTIAERE 393
K L HP +V+ I F + E C G ++F K ++
Sbjct: 78 FMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDT 137
Query: 394 ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
I Q A+++++ KPP+IH DLK N+LL+ G IK+ DFG + + ++
Sbjct: 138 VLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQ---GTIKLCDFGSATTI---SHY 191
Query: 454 PDHGMDLTSQGA--------GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGK 505
PD+ + T Y PE + N P I K D+W++G I Y + +
Sbjct: 192 PDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFP-IGEKQDIWALGCILYLLCFRQ 250
Query: 506 KPFGHNQSQATILEENTILKATEVQFA--NKPTVSNEAKGFIRSCLAYRKEDRIDVISLA 563
PF E+ L+ +++ T IR+ L E+R+ + +
Sbjct: 251 HPF----------EDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVV 300
Query: 564 RH-------DYLQP--PVPKHGRQSASSSAPVGHSP 590
+ P P+ + Q+ +
Sbjct: 301 HQLQEIAAARNVNPKSPITELLEQNGGYGSATLSRG 336
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 171 bits (434), Expect = 6e-48
Identities = 42/324 (12%), Positives = 87/324 (26%), Gaps = 52/324 (16%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKV-----HQLNKDWKEDKKANYIKHALREYNIHKAL 348
L G S V D++ A KV + + +A + L + +A
Sbjct: 69 PLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEAR 128
Query: 349 DHPRVVKLYDVFEI----------------DANSFCTVLEYCDG------HDLDFYLKQH 386
D R++ D + ++ ++ LDF
Sbjct: 129 DRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFR 188
Query: 387 KTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKV 446
+ Q++ L ++H P N+ + G + + D
Sbjct: 189 GDEGILALHILTAQLIRLAANLQSKG--LVHGHFTPDNLFIMPD---GRLMLGDVSALWK 243
Query: 447 MDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKK 506
+ + Y P E + + + ++ W +G+ Y+
Sbjct: 244 VGT----------RGPASSVPVTYAPRE--FLNASTATFTHALNAWQLGLSIYRVWCLFL 291
Query: 507 PFGH---NQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLA 563
PFG + + + F + + + K I L + + R+ +
Sbjct: 292 PFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAM 351
Query: 564 RHDYLQPPVPKHGRQSASSSAPVG 587
+ SSS G
Sbjct: 352 ETPEFL-----QLQNEISSSLSTG 370
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 167 bits (424), Expect = 5e-47
Identities = 78/302 (25%), Positives = 121/302 (40%), Gaps = 43/302 (14%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKD----WKEDKKANYIK 336
+ Y L LLGKGGF V L ++ VA KV + ++ W +
Sbjct: 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKV--IPRNRVLGWSPLSDSVTCP 82
Query: 337 HALREYNIHKALD----HPRVVKLYDVFEIDANSFCTVLEY-CDGHDLDFYLKQHKTIAE 391
E + + HP V++L D FE F VLE DL Y+ + + E
Sbjct: 83 ---LEVALLWKVGAGGGHPGVIRLLDWFE-TQEGFMLVLERPLPAQDLFDYITEKGPLGE 138
Query: 392 REARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEEN 451
+R QVV+A+++ + V+H D+K NIL+ G K+ DFG ++ +E
Sbjct: 139 GPSRCFFGQVVAAIQHCHSRG--VVHRDIKDENILIDLRR--GCAKLIDFGSGALLHDEP 194
Query: 452 YNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHN 511
Y GT Y PPE ++ + VWS+G++ Y + G PF
Sbjct: 195 YT-------DF--DGTRVYSPPE-WISRH--QYHALPATVWSLGILLYDMVCGDIPFER- 241
Query: 512 QSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPP 571
+ IL+A + VS + IR CLA + R + + ++Q P
Sbjct: 242 --------DQEILEA---ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTP 290
Query: 572 VP 573
Sbjct: 291 AE 292
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 174 bits (443), Expect = 7e-47
Identities = 70/247 (28%), Positives = 102/247 (41%), Gaps = 28/247 (11%)
Query: 280 NNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHAL 339
+ + + LG GGF V + VA K ++ +
Sbjct: 7 SLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQ--CRQE----LSPKNRERWC 60
Query: 340 REYNIHKALDHPRVVKLYDVFE-----IDANSFCTVLEYCDGHDLDFYLKQHKTIA---E 391
E I K L+HP VV +V + + +EYC+G DL YL Q + E
Sbjct: 61 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE 120
Query: 392 REARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEEN 451
R+++ + SAL+YL+E + +IH DLKP NI+L G KI D G +K +D+
Sbjct: 121 GPIRTLLSDISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE 178
Query: 452 YNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHN 511
T GT YL PE K K + VD WS G + ++C+ G +PF N
Sbjct: 179 L-------CTEF-VGTLQYLAPELL-EQK---KYTVTVDYWSFGTLAFECITGFRPFLPN 226
Query: 512 QSQATIL 518
Sbjct: 227 WQPVQWH 233
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 167 bits (425), Expect = 8e-47
Identities = 61/326 (18%), Positives = 120/326 (36%), Gaps = 50/326 (15%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNK-------DWKEDKKANYIK 336
+ Y ++ L +G F+++ K+ ++ A K L K + + +
Sbjct: 31 NDYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYD 88
Query: 337 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH--------KT 388
E I + + + + + + + EY + + + +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIIT-NYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 389 IAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMD 448
I + + I+ V+++ Y++ K + H D+KP NIL+ + G +K++DFG S
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDKN---GRVKLSDFGES---- 199
Query: 449 EENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
Y D + S GTY ++PPE +KVD+WS+G+ Y Y PF
Sbjct: 200 --EYMVDKKIK-GS--RGTYEFMPPE--FFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
Query: 509 GHNQSQATILE--------------ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKE 554
S + + + +SNE F++ L
Sbjct: 253 SLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPA 312
Query: 555 DRIDVISLARHDYLQPPVPKHGRQSA 580
+RI +H++L + R+ +
Sbjct: 313 ERITSEDALKHEWLADTNIEDLREFS 338
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 165 bits (421), Expect = 2e-46
Identities = 81/306 (26%), Positives = 128/306 (41%), Gaps = 41/306 (13%)
Query: 272 HNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKD----WK 327
H + L +Y + LLG GGF V+ + + VA K + KD W
Sbjct: 28 HATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH--VEKDRISDWG 85
Query: 328 EDKKANYIKHALREYNIHKALDH--PRVVKLYDVFEIDANSFCTVLEYCDGH-DLDFYLK 384
E + E + K + V++L D FE +SF +LE + DL ++
Sbjct: 86 ELPNGTRVP---MEVVLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFIT 141
Query: 385 QHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLS 444
+ + E ARS QV+ A+++ + V+H D+K NIL+ GE+K+ DFG
Sbjct: 142 ERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNR--GELKLIDFGSG 197
Query: 445 KVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYG 504
++ + Y GT Y PPE ++ VWS+G++ Y + G
Sbjct: 198 ALLKDTVYT-------DF--DGTRVYSPPE-WIRYH--RYHGRSAAVWSLGILLYDMVCG 245
Query: 505 KKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLAR 564
PF H + I++ Q + VS+E + IR CLA R DR +
Sbjct: 246 DIPFEH---------DEEIIRG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293
Query: 565 HDYLQP 570
H ++Q
Sbjct: 294 HPWMQD 299
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 163 bits (415), Expect = 1e-45
Identities = 71/285 (24%), Positives = 116/285 (40%), Gaps = 42/285 (14%)
Query: 285 LSDRYLLLM-LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
++D Y L +LG G +V + F + + A K+ L + +E +
Sbjct: 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKL--LYD--SPKAR--------QEVD 73
Query: 344 IH-KALDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDL--DFYLKQHKTIAEREARSI 397
H +A P +V + DV+E ++E +G +L + + EREA I
Sbjct: 74 HHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEI 133
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ + +A+++L+ + H D+KP N+L T +K+TDFG +K +
Sbjct: 134 MRDIGTAIQFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL----- 186
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF---GHNQSQ 514
T +Y+ PE V+G K D+WS+GVI Y L G PF
Sbjct: 187 ----QTPCYTPYYVAPE--VLGPE--KYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS 238
Query: 515 ATILEENTILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
+ I + F N VS +AK IR L +R+
Sbjct: 239 PGMKRR--IRLG-QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERL 280
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 161 bits (410), Expect = 3e-45
Identities = 72/297 (24%), Positives = 113/297 (38%), Gaps = 61/297 (20%)
Query: 272 HNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKK 331
H + + + ++ D + +LG G +V + F+ + Q A K+ L +
Sbjct: 3 HVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--LQD--CPKAR 58
Query: 332 ANYIKHALREYNIHKAL-DHPRVVKLYDVFE---IDANSFCTVLEYCDGHDL--DFYLKQ 385
RE +H P +V++ DV+E V+E DG +L +
Sbjct: 59 --------REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRG 110
Query: 386 HKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
+ EREA I+ + A++YL+ I + H D+KP N+L T +K+TDFG +K
Sbjct: 111 DQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
Query: 446 VMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGK 505
E Y+ D+WS+GVI Y L G
Sbjct: 169 ETTGEKYDK---------------------------------SCDMWSLGVIMYILLCGY 195
Query: 506 KPFGHNQSQAT---ILEENTILKATEVQFANKP--TVSNEAKGFIRSCLAYRKEDRI 557
PF N A + I + +F N VS E K IR+ L R+
Sbjct: 196 PPFYSNHGLAISPGMKTR--IRMG-QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 249
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 161 bits (409), Expect = 4e-44
Identities = 80/303 (26%), Positives = 127/303 (41%), Gaps = 40/303 (13%)
Query: 266 RELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKD 325
++ + H + + + ++ D + +LG G +V + F+ + Q A K+ L
Sbjct: 41 QQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--LQD- 97
Query: 326 WKEDKKANYIKHALREYNIHKAL-DHPRVVKLYDVFE---IDANSFCTVLEYCDGHDL-- 379
+ RE +H P +V++ DV+E V+E DG +L
Sbjct: 98 -CPKAR--------REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFS 148
Query: 380 DFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKIT 439
+ + EREA I+ + A++YL+ I + H D+KP N+L T +K+T
Sbjct: 149 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLT 206
Query: 440 DFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFY 499
DFG +K N LT+ T +Y+ PE V+G K D+WS+GVI Y
Sbjct: 207 DFGFAKETTSHN-------SLTTP-CYTPYYVAPE--VLGPE--KYDKSCDMWSLGVIMY 254
Query: 500 QCLYGKKPFGHNQSQAT---ILEENTILKATEVQFANKP--TVSNEAKGFIRSCLAYRKE 554
L G PF N A + I + +F N VS E K IR+ L
Sbjct: 255 ILLCGYPPFYSNHGLAISPGMKTR--IRMG-QYEFPNPEWSEVSEEVKMLIRNLLKTEPT 311
Query: 555 DRI 557
R+
Sbjct: 312 QRM 314
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 158 bits (401), Expect = 5e-44
Identities = 70/280 (25%), Positives = 112/280 (40%), Gaps = 29/280 (10%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+G+G F V+K D + VA Q K K + + E + K L HP +
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSE-----RQRFKEEAEMLKGLQHPNI 87
Query: 354 VKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNE 410
V+ YD +E V E L YLK+ K + + RS Q++ L++L+
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT 147
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGT-YW 469
PP+IH DLK NI +T G +KI D GL+ + GT +
Sbjct: 148 RTPPIIHRDLKCDNIFITGPT--GSVKIGDLGLATLKRA---------SFAKAVIGTPEF 196
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEV 529
+ PE + + K VDV++ G+ + + P+ Q+ A I + +
Sbjct: 197 -MAPE---MYEE--KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY---RRVTSGVK 247
Query: 530 QFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+ E K I C+ K++R + L H + Q
Sbjct: 248 PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 287
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 157 bits (400), Expect = 1e-43
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 30/288 (10%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
Y LL +GKG F++V A + R VA K+ ++K ++ RE I K
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKI--IDK---TQLNPTSLQKLFREVRIMKI 70
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKY 407
L+HP +VKL++V E + + ++EY G ++ YL H + E+EARS Q+VSA++Y
Sbjct: 71 LNHPNIVKLFEVIETEKTLYL-IMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY 129
Query: 408 LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGT 467
++ + ++H DLK N+LL IKI DFG S +D G
Sbjct: 130 CHQKR--IVHRDLKAENLLLDAD---MNIKIADFGFSNEF-----TVGGKLD-AF--CGA 176
Query: 468 YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATILEENTILKA 526
Y PE F + +VDVWS+GVI Y + G PF G N + L E +L+
Sbjct: 177 PPYAAPELF---QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE---LRER-VLRG 229
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPK 574
++ +S + + ++ L R + + + ++ +
Sbjct: 230 ---KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEE 274
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 156 bits (396), Expect = 3e-43
Identities = 78/312 (25%), Positives = 133/312 (42%), Gaps = 42/312 (13%)
Query: 280 NNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKD-------------- 325
+ V ++Y L +GKG + V A++ + Y A KV L+K
Sbjct: 6 SGDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKV--LSKKKLIRQAGFPRRPPP 63
Query: 326 -------WKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDA-NSFCTVLEYCDGH 377
+ I+ +E I K LDHP VVKL +V + + V E +
Sbjct: 64 RGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQG 123
Query: 378 DLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIK 437
+ + K ++E +AR ++ ++YL+ K +IH D+KP N+L+ E G IK
Sbjct: 124 PV-MEVPTLKPLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLLVGE---DGHIK 177
Query: 438 ITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVI 497
I DFG+S + L S GT ++ PE + +DVW++GV
Sbjct: 178 IADFGVSNEFKGSD-------ALLSNTVGTPAFMAPES-LSETRKIFSGKALDVWAMGVT 229
Query: 498 FYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRI 557
Y ++G+ PF ++ + + I ++F ++P ++ + K I L E RI
Sbjct: 230 LYCFVFGQCPF-MDERIMCLHSK--IKSQ-ALEFPDQPDIAEDLKDLITRMLDKNPESRI 285
Query: 558 DVISLARHDYLQ 569
V + H ++
Sbjct: 286 VVPEIKLHPWVT 297
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 155 bits (394), Expect = 6e-43
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 20/225 (8%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
++++RY ++ LG GG S V+ A D VA K + +E +K RE +
Sbjct: 8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKA--IFIPPREK--EETLKRFEREVH 63
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
L H +V + DV E D + V+EY +G L Y++ H ++ A + Q++
Sbjct: 64 NSSQLSHQNIVSMIDVDEEDDCYY-LVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILD 122
Query: 404 ALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQ 463
+K+ ++++ ++H D+KP NIL+ +KI DFG++K + E + T+
Sbjct: 123 GIKHAHDMR--IVHRDIKPQNILIDSN---KTLKIFDFGIAKALSET------SLTQTNH 171
Query: 464 GAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
GT Y PE G+ D++S+G++ Y+ L G+ PF
Sbjct: 172 VLGTVQYFSPEQ-AKGE---ATDECTDIYSIGIVLYEMLVGEPPF 212
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 156 bits (395), Expect = 1e-42
Identities = 78/307 (25%), Positives = 125/307 (40%), Gaps = 41/307 (13%)
Query: 274 EDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKD------WK 327
E + S +Y + LG G F V A D ++ + V K + K+ W
Sbjct: 11 ELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKF--IKKEKVLEDCWI 68
Query: 328 EDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLE-YCDGHDLDFYLKQH 386
ED K + E I ++H ++K+ D+FE + F V+E + G DL ++ +H
Sbjct: 69 EDPKLGKVT---LEIAILSRVEHANIIKVLDIFE-NQGFFQLVMEKHGSGLDLFAFIDRH 124
Query: 387 KTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKV 446
+ E A I Q+VSA+ YL +IH D+K NI++ E IK+ DFG +
Sbjct: 125 PRLDEPLASYIFRQLVSAVGYLRLKD--IIHRDIKDENIVIAED---FTIKLIDFGSAAY 179
Query: 447 MDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKK 506
++ T GT Y PE +G P ++++WS+GV Y ++ +
Sbjct: 180 LE-----RGKLFY-TF--CGTIEYCAPEVL-MGN--PYRGPELEMWSLGVTLYTLVFEEN 228
Query: 507 PFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHD 566
PF E ++A VS E + L E R + L
Sbjct: 229 PF---------CELEETVEA---AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDP 276
Query: 567 YLQPPVP 573
++ PV
Sbjct: 277 WVTQPVN 283
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 153 bits (389), Expect = 4e-42
Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
LSDRY L +LG GG SEVH A DL++ R VA KV L D D ++ RE
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKV--LRADLARD--PSFYLRFRREAQ 64
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCT---VLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
AL+HP +V +YD E + + V+EY DG L + + + A ++
Sbjct: 65 NAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIAD 124
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
AL + ++ +IH D+KP NI+++ +K+ DFG+++ + + G +
Sbjct: 125 ACQALNFSHQNG--IIHRDVKPANIMISAT---NAVKVMDFGIARAIADS------GNSV 173
Query: 461 TSQGA--GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T A GT YL PE G + ++ DV+S+G + Y+ L G+ PF
Sbjct: 174 TQTAAVIGTAQYLSPEQ-ARGD---SVDARSDVYSLGCVLYEVLTGEPPF 219
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 152 bits (387), Expect = 9e-42
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 25/332 (7%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+ + L+ LG+G + EV A + + VA K+ ++ + + ++ +E I+K
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI--VDMK----RAVDCPENIKKEICINK 60
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
L+H VVK Y + N LEYC G +L ++ + E +A+ Q+++ +
Sbjct: 61 MLNHENVVKFYGHRR-EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 407 YLNEIKPPVIHYDLKPGNILLTE-GNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
YL+ I + H D+KP N+LL E N +KI+DFGL+ V N + ++
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDN----LKISDFGLATVFRYN--NRERLLN-KM--C 168
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
GT Y+ PE + K + VDVWS G++ L G+ P+ +Q + E + +
Sbjct: 169 GTLPYVAPE---LLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKE 223
Query: 526 ATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKHGRQSASSSAP 585
+ + + + L RI + + + + P+ K ++ +S
Sbjct: 224 K-KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGG 282
Query: 586 VGHSPASSGQNQNSGGASTQSSAVQQSFATGL 617
V SP+ ++ S + ++ ++ +G
Sbjct: 283 VSESPSGFSKHIQSNLDFSPVNSASRTPGSGW 314
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 154 bits (390), Expect = 2e-41
Identities = 53/372 (14%), Positives = 112/372 (30%), Gaps = 62/372 (16%)
Query: 277 SRFNNHPVLSDRYLLLM---LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKED---- 329
F L +R L+ +LG+ +A D + V + +
Sbjct: 65 QPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQ 124
Query: 330 --KKANYIKHALREYNIHKALDHPRVVKLYDVFEI-----------DANSFCTVLEY--- 373
++ ++ N +A H R + +D+ + D + +
Sbjct: 125 MKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLY 184
Query: 374 ----CDGHD----LDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNI 425
+ L + HK++ + +QV+ L L+ ++H L+P +I
Sbjct: 185 PRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRPVDI 242
Query: 426 LLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFV-VGKNPPK 484
+L + G + +T F + +G +P
Sbjct: 243 VLDQR---GGVFLTGFEHLVRDGAS------AVSPIGRGFAPPETTAERMLPFGQHHPTL 293
Query: 485 ISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGF 544
++ D W++G+ Y P + + E F + + +
Sbjct: 294 MTFAFDTWTLGLAIYWIWCADLPNTDDAALGGS----------EWIFRSCKNIPQPVRAL 343
Query: 545 IRSCLAYRKEDRIDVISLARH-------DYLQPPVPKHGRQSASSSAPVGHSPASSGQNQ 597
+ L Y KEDR+ + L +P + + G +P S
Sbjct: 344 LEGFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPLYQTDGEPT--REGGAPPSGTSQP 401
Query: 598 NSGGASTQSSAV 609
+ GA+ +A+
Sbjct: 402 DEAGAAEAVTAI 413
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 151 bits (383), Expect = 3e-41
Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 24/223 (10%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
Y L L+G+GG +V++A D +R VA K+ +++ D + RE
Sbjct: 35 PYRLRRLVGRGGMGDVYEAEDTVRERIVALKL--MSETLSSD--PVFRTRMQREARTAGR 90
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKY 407
L P VV ++D EID + + +G DL L++ +A A +IV Q+ SAL
Sbjct: 91 LQEPHVVPIHDFGEIDGQLY-VDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDA 149
Query: 408 LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA-- 465
+ H D+KP NIL++ + DFG++ +E LT G
Sbjct: 150 AHAAG--ATHRDVKPENILVSAD---DFAYLVDFGIASATTDEK--------LTQLGNTV 196
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
GT +Y+ PE F + + D++++ + Y+CL G P+
Sbjct: 197 GTLYYMAPERFSES----HATYRADIYALTCVLYECLTGSPPY 235
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 150 bits (380), Expect = 4e-41
Identities = 71/290 (24%), Positives = 129/290 (44%), Gaps = 25/290 (8%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+ + L+ LG+G + EV A + + VA K+ ++ + + ++ +E I+K
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI--VDMK----RAVDCPENIKKEICINK 60
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
L+H VVK Y + N LEYC G +L ++ + E +A+ Q+++ +
Sbjct: 61 MLNHENVVKFYGHRR-EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 407 YLNEIKPPVIHYDLKPGNILLTE-GNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
YL+ I + H D+KP N+LL E N +KI+DFGL+ V N + ++
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDN----LKISDFGLATVFRYN--NRERLLN-KM--C 168
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
GT Y+ PE + K + VDVWS G++ L G+ P+ +Q + E + +
Sbjct: 169 GTLPYVAPE---LLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKE 223
Query: 526 ATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
+ + + + L RI + + + + P+ K
Sbjct: 224 K-KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKG 272
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 149 bits (377), Expect = 9e-41
Identities = 59/229 (25%), Positives = 96/229 (41%), Gaps = 19/229 (8%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+GKGGF VHK +K++ VA K L E + + RE I L+HP +V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYL-KQHKTIAEREARSIVMQVVSALKYLNEIKP 413
KLY + N V+E+ DL L + I +++ + ++Y+ P
Sbjct: 87 KLYGLM---HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 414 PVIHYDLKPGNILLTEGNVCGE--IKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
P++H DL+ NI L + K+ DFGLS+ S G + ++
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS----------VSGLLGNFQWM 193
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATILE 519
PE + + K D +S +I Y L G+ PF ++ + +
Sbjct: 194 APETIGAEEES--YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 148 bits (377), Expect = 1e-40
Identities = 71/285 (24%), Positives = 123/285 (43%), Gaps = 25/285 (8%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
+YL+ LLG+G + +V + D + A K+ L K K + N + +E + +
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKI--LKKK-KLRRIPNGEANVKKEIQLLRR 62
Query: 348 LDHPRVVKLYDVFEIDANS-FCTVLEYCDG--HDLDFYLKQHKTIAEREARSIVMQVVSA 404
L H V++L DV + V+EYC ++ + + + +A Q++
Sbjct: 63 LRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR-FPVCQAHGYFCQLIDG 121
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
L+YL+ ++H D+KPGN+LLT G G +KI+ G+++ + + D TSQG
Sbjct: 122 LEYLHSQG--IVHKDIKPGNLLLTTG---GTLKISALGVAEALHP--FAADDTCR-TSQG 173
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
+ + PPE + KVD+WS GV Y G PF + + E I
Sbjct: 174 --SPAFQPPE--IANGLDTFSGFKVDIWSAGVTLYNITTGLYPF-EGDNIYKLFEN--IG 226
Query: 525 KATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
K +A ++ L Y R + + +H + +
Sbjct: 227 KG---SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFR 268
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 148 bits (375), Expect = 2e-40
Identities = 82/296 (27%), Positives = 127/296 (42%), Gaps = 27/296 (9%)
Query: 280 NNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHAL 339
++ V Y+L LG G F +V VA K+ LN+ + + + +
Sbjct: 4 HDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKI--LNRQ--KIRSLDVVGKIK 59
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE K HP ++KLY V + F V+EY G +L Y+ +H + E EAR +
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTDFFM-VMEYVSGGELFDYICKHGRVEEMEARRLFQ 118
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q++SA+ Y + V+H DLKP N+LL KI DFGLS N D
Sbjct: 119 QILSAVDYCHRHM--VVHRDLKPENVLLDAH---MNAKIADFGLS------NMMSDGEFL 167
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
TS G+ Y PE + G+ +VD+WS GVI Y L G PF ++ T+ +
Sbjct: 168 RTS--CGSPNYAAPE-VISGR--LYAGPEVDIWSCGVILYALLCGTLPF-DDEHVPTLFK 221
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
+ I F ++ + L R + + H++ + +P +
Sbjct: 222 K--IRGG---VFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSY 272
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 148 bits (377), Expect = 2e-40
Identities = 82/284 (28%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 271 IHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDK 330
+ + D + +LG+G FS V A +L R A K+ L K +
Sbjct: 15 LQHAQPPPQPRKKRPED-FKFGKILGEGSFSTVVLARELATSREYAIKI--LEK--RHII 69
Query: 331 KANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA 390
K N + + RE ++ LDHP VKLY F+ D L Y +L Y+++ +
Sbjct: 70 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQ-DDEKLYFGLSYAKNGELLKYIRKIGSFD 128
Query: 391 EREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEE 450
E R ++VSAL+YL+ +IH DLKP NILL E I+ITDFG +KV+ E
Sbjct: 129 ETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNED---MHIQITDFGTAKVLSPE 183
Query: 451 NYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSK-----VDVWSVGVIFYQCLYGK 505
+ + GT Y+ PE ++ K D+W++G I YQ + G
Sbjct: 184 SKQ-----ARANSFVGTAQYVSPEL---------LTEKSACKSSDLWALGCIIYQLVAGL 229
Query: 506 KPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCL 549
PF ++ I ++ I+K E F +A+ + L
Sbjct: 230 PPF-RAGNEYLIFQK--IIKL-EYDF--PEKFFPKARDLVEKLL 267
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 148 bits (375), Expect = 9e-40
Identities = 70/306 (22%), Positives = 116/306 (37%), Gaps = 23/306 (7%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
DRY + +G G F D + VA K + + D+ ++ RE H+
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKY--IERGAAIDEN---VQ---REIINHR 71
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
+L HP +V+ +V ++EY G +L + +E EAR Q++S +
Sbjct: 72 SLRHPNIVRFKEVIL-TPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVS 130
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
Y + ++ + H DLK N LL +G+ +KI DFG SK H ++ G
Sbjct: 131 YCHSMQ--ICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSV------LHSQPKST--VG 179
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKA 526
T Y+ PE V DVWS GV Y L G PF + + + +
Sbjct: 180 TPAYIAPE---VLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILS 236
Query: 527 TEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKHGRQSASSSAPV 586
+ + +S E I RI + + H + +P +++ +
Sbjct: 237 VKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQF 296
Query: 587 GHSPAS 592
Sbjct: 297 QEPEQP 302
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 145 bits (369), Expect = 1e-39
Identities = 57/316 (18%), Positives = 109/316 (34%), Gaps = 57/316 (18%)
Query: 276 QSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYI 335
+SR+ + + L +G G F V K + A K + D++
Sbjct: 6 KSRY------TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQN--- 56
Query: 336 KHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK----TIA 390
ALRE H L H VV+ + + + + EYC+G L + ++
Sbjct: 57 --ALREVYAHAVLGQHSHVVRYFSAWA-EDDHMLIQNEYCNGGSLADAISENYRIMSYFK 113
Query: 391 EREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEI-------------- 436
E E + +++QV L+Y++ + ++H D+KP NI ++ ++
Sbjct: 114 EAELKDLLLQVGRGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171
Query: 437 --KITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSV 494
KI D G + + G +L E V+ +N K D++++
Sbjct: 172 MFKIGDLGHVTRISSPQ----------VE-EGDSRFLANE--VLQENYTH-LPKADIFAL 217
Query: 495 GVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKE 554
+ + + I + L S E ++ + E
Sbjct: 218 ALTVVCAAGAEPLPRNGDQWHEIRQGR--LPRIPQVL------SQEFTELLKVMIHPDPE 269
Query: 555 DRIDVISLARHDYLQP 570
R ++L +H L
Sbjct: 270 RRPSAMALVKHSVLLS 285
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 147 bits (374), Expect = 2e-39
Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 24/260 (9%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDH 350
+L +GKG F +V ++ A K +NK ++ +++ +E I + L+H
Sbjct: 19 ILRAIGKGSFGKVCIVQKNDTKKMYAMKY--MNKQKCVERNE--VRNVFKELQIMQGLEH 74
Query: 351 PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNE 410
P +V L+ F+ D V++ G DL ++L+Q+ E + + ++V AL YL
Sbjct: 75 PFLVNLWYSFQ-DEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQN 133
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
+ +IH D+KP NILL E G + ITDF ++ ++ E + AGT Y
Sbjct: 134 QR--IIHRDMKPDNILLDEH---GHVHITDFNIAAMLPRE--------TQITTMAGTKPY 180
Query: 471 LPPECFVVGKNPPKISSK-VDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEV 529
+ PE + S VD WS+GV Y+ L G++P+ S ++ +T V
Sbjct: 181 MAPE--MFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETT-VV 237
Query: 530 QFANKPTVSNEAKGFIRSCL 549
+ S E ++ L
Sbjct: 238 TY--PSAWSQEMVSLLKKLL 255
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 148 bits (376), Expect = 2e-39
Identities = 82/311 (26%), Positives = 130/311 (41%), Gaps = 28/311 (9%)
Query: 248 NHPVLSDSYLIGYKNLHIRELKRIHNEDQ---------SRFNNHPVLSDRYLLLMLLGKG 298
N L D +L L++ N D ++ + + ++ Y ++ ++G+G
Sbjct: 21 NSDCLLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRG 80
Query: 299 GFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYD 358
F EV ++ A K+ L+K E K + E +I + P VV+L+
Sbjct: 81 AFGEVQLVRHKSTRKVYAMKL--LSK--FEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 359 VFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHY 418
F+ D V+EY G DL L + + E+ AR +VV AL ++ + IH
Sbjct: 137 AFQ-DDRYLYMVMEYMPGGDL-VNLMSNYDVPEKWARFYTAEVVLALDAIHSMG--FIHR 192
Query: 419 DLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVV 478
D+KP N+LL + G +K+ DFG M++E GM GT Y+ PE
Sbjct: 193 DVKPDNMLLDK---SGHLKLADFGTCMKMNKE------GMVRCDTAVGTPDYISPEVLKS 243
Query: 479 GKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKPTVS 538
+ D WSVGV Y+ L G PF + T + + F + +S
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY--SKIMNHKNSLTFPDDNDIS 301
Query: 539 NEAKGFIRSCL 549
EAK I + L
Sbjct: 302 KEAKNLICAFL 312
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 147 bits (371), Expect = 4e-39
Identities = 45/311 (14%), Positives = 96/311 (30%), Gaps = 61/311 (19%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKV---------------------HQLNKDWKEDKKA 332
+LG+ +A D + V +L + K K+A
Sbjct: 80 VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA 139
Query: 333 NYIKHALREYNIHKALDHPRVVKLYDVFE-IDANSFCTVLEYCD------GHDLDFYLKQ 385
+ +++ K +++++ + S + G L +
Sbjct: 140 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSST 199
Query: 386 HKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
HK++ + +QV+ L L+ ++H L+P +I+L + G + +T F
Sbjct: 200 HKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRPVDIVLDQR---GGVFLTGFEHLV 254
Query: 446 VMDEENYNPDHGMDLTSQGAGTYWYLPPE-------CFVVGKNPPKISSKVDVWSVGVIF 498
G + S + + PPE ++ D W++G++
Sbjct: 255 ---------RDGARVVSSV--SRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303
Query: 499 YQCLYGKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRID 558
Y P + + E F + + + + L Y KEDR+
Sbjct: 304 YWIWCADLPITKDAALGGS----------EWIFRSCKNIPQPVRALLEGFLRYPKEDRLL 353
Query: 559 VISLARHDYLQ 569
+ +
Sbjct: 354 PLQAMETPEYE 364
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 143 bits (363), Expect = 6e-39
Identities = 86/295 (29%), Positives = 135/295 (45%), Gaps = 28/295 (9%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR 340
Y ++ LG+G F++V A+ + VA K+ +NK K++ R
Sbjct: 7 ADGAHIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKI--INKK--VLAKSDMQGRIER 62
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQ 400
E + + L HP ++KLYDV + V+EY D Y+ Q ++E+EAR Q
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIM-VIEYAGNELFD-YIVQRDKMSEQEARRFFQQ 120
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
++SA++Y + K ++H DLKP N+LL E +KI DFGLS N D
Sbjct: 121 IISAVEYCHRHK--IVHRDLKPENLLLDEH---LNVKIADFGLS------NIMTDGNFLK 169
Query: 461 TSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEE 520
TS G+ Y PE V +VDVWS GVI Y L + PF ++S + +
Sbjct: 170 TS--CGSPNYAAPE---VISGKLYAGPEVDVWSCGVILYVMLCRRLPF-DDESIPVLFKN 223
Query: 521 NTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
I + +S A G I+ L +RI + + + D+ + +P++
Sbjct: 224 --ISNG---VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEY 273
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 145 bits (368), Expect = 9e-39
Identities = 55/330 (16%), Positives = 107/330 (32%), Gaps = 50/330 (15%)
Query: 254 DSYLIGYKNLHIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKA-----FD 308
+ Y N + K + ++ F + S + LLG+G F++V++A D
Sbjct: 35 SKPVSSYPNTFEWQCKLPAIKPKTEF---QLGSKLVYVHHLLGEGAFAQVYEATQGDLND 91
Query: 309 LKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFC 368
K ++ KV + W+ + K +K Y N
Sbjct: 92 AKNKQKFVLKVQKPANPWE-------FYIGTQLMERLKPSMQHMFMKFYSAHL-FQNGSV 143
Query: 369 TVLEYCDGHDLDFYLKQHK-----TIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPG 423
V E L + +K + + S M+++ ++ +++ + +IH D+KP
Sbjct: 144 LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE--IIHGDIKPD 201
Query: 424 NILL--------TEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPEC 475
N +L E ++ + + D G S M + + T + E
Sbjct: 202 NFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKG-----TIFTAKCETSGFQCVE- 255
Query: 476 FVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKP 535
++ P ++D + V Y L+G N+ E +
Sbjct: 256 -MLSNKPWNY--QIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGL-------FRRLPHL 305
Query: 536 TVSNEAKGFIRSCLAYRKEDRIDVISLARH 565
+ NE F L + + L R
Sbjct: 306 DMWNE---FFHVMLNIPDCHHLPSLDLLRQ 332
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 144 bits (366), Expect = 1e-38
Identities = 62/290 (21%), Positives = 100/290 (34%), Gaps = 28/290 (9%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+G+G F EVH+ D + A K +L E E
Sbjct: 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE------------ELVACA 105
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
L PR+V LY + +E +G L +KQ + E A + Q + L+
Sbjct: 106 GLSSPRIVPLYG-AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLE 164
Query: 407 YLNEIKPPVIHYDLKPGNILLT-EGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
YL+ + ++H D+K N+LL+ +G+ + DFG + + +
Sbjct: 165 YLHTRR--ILHGDVKADNVLLSSDGS---RAALCDFGHALCLQPDGLGKSLLTGDYIP-- 217
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
GT ++ PE VV P +KVD+WS + L G P+ L+ I
Sbjct: 218 GTETHMAPE--VVMGKPC--DAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK---IAS 270
Query: 526 ATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
P+ + I+ L R + L R
Sbjct: 271 EPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGG 320
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 143 bits (362), Expect = 2e-38
Identities = 67/291 (23%), Positives = 114/291 (39%), Gaps = 23/291 (7%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR 340
+ + L +G G +V K K +A K + + + +E K L
Sbjct: 19 RYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEE------NKRILM 72
Query: 341 EYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
+ ++ K+ D P +V+ + F + +E + I ER + +
Sbjct: 73 DLDVVLKSHDCPYIVQCFGTFITN-TDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTV 131
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
+V AL YL E K VIH D+KP NILL E G+IK+ DFG+S +
Sbjct: 132 AIVKALYYLKE-KHGVIHRDVKPSNILLDER---GQIKLCDFGISGRL-------VDDKA 180
Query: 460 LTSQGAGTYWYLPPECFVVGKNP-PKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
AG Y+ PE P + DVWS+G+ + G+ P+ + ++ +L
Sbjct: 181 KDRS-AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVL 239
Query: 519 EENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+L+ S + + F++ CL R L H +++
Sbjct: 240 T--KVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIK 288
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 142 bits (360), Expect = 5e-38
Identities = 59/353 (16%), Positives = 114/353 (32%), Gaps = 84/353 (23%)
Query: 277 SRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKV-------HQLNKDWKED 329
SR+ + + +G+GGF V +A + + A K K +E
Sbjct: 2 SRYL------TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREV 55
Query: 330 KKANYIKH--------------------------------------------ALREYNIH 345
K ++H +
Sbjct: 56 KALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRM 115
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE---ARSIVMQVV 402
V ++ C +L ++ + ++ +RE I +Q+
Sbjct: 116 DPFSTKNTVGQLQPSSPK-VYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIA 174
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEEN-----YNPDHG 457
A+++L+ ++H DLKP NI T +K+ DFGL MD++ P
Sbjct: 175 EAVEFLHSKG--LMHRDLKPSNIFFTMD---DVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATI 517
+ GT Y+ PE + N S KVD++S+G+I ++ LY + +
Sbjct: 230 YATHTGQVGTKLYMSPE--QIHGNN--YSHKVDIFSLGLILFELLYSFST-QMERVR--- 281
Query: 518 LEENTILKATEVQFANKPTV-SNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
I ++F T + ++ L+ +R + + + +
Sbjct: 282 ----IITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFE 330
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 144 bits (366), Expect = 1e-37
Identities = 79/296 (26%), Positives = 130/296 (43%), Gaps = 27/296 (9%)
Query: 280 NNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHAL 339
++ V Y+L LG G F +V VA K+ LN+ + + + +
Sbjct: 9 HDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKI--LNRQ--KIRSLDVVGKIR 64
Query: 340 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM 399
RE K HP ++KLY V ++ F V+EY G +L Y+ ++ + E+E+R +
Sbjct: 65 REIQNLKLFRHPHIIKLYQVISTPSDIFM-VMEYVSGGELFDYICKNGRLDEKESRRLFQ 123
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q++S + Y + V+H DLKP N+LL KI DFGLS +M + +
Sbjct: 124 QILSGVDYCHRHM--VVHRDLKPENVLLDAH---MNAKIADFGLSNMM-----SDGEFLR 173
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
TS G+ Y PE G+ +VD+WS GVI Y L G PF + T+ +
Sbjct: 174 -TS--CGSPNYAAPEVI-SGR--LYAGPEVDIWSSGVILYALLCGTLPF-DDDHVPTLFK 226
Query: 520 ENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
+ I F ++ ++ L R + + H++ + +PK+
Sbjct: 227 K--ICDG---IFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKY 277
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 146 bits (370), Expect = 3e-37
Identities = 94/468 (20%), Positives = 168/468 (35%), Gaps = 62/468 (13%)
Query: 195 EYYEADEILKLRQSALKKEDADLQLEMEKLERERNL--HIRELKRIHNEDQSRFNNHPVL 252
E E +E + + +L ++ H++ F +
Sbjct: 93 EKLETEEERLVCSREIFDTYIMKELLACSHPFSKSAIEHVQGHLVKKQVPPDLFQPYIEE 152
Query: 253 SDSYLIGY---KNLHIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDL 309
L G K + + R N H ++D + + ++G+GGF EV+
Sbjct: 153 ICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMND-FSVHRIIGRGGFGEVYGCRKA 211
Query: 310 KEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI---HKALDHPRVVKLYDVFEIDANS 366
+ A K L+K K K AL E + D P +V + F +
Sbjct: 212 DTGKMYAMKC--LDK--KRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH-TPDK 266
Query: 367 FCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNIL 426
+L+ +G DL ++L QH +E + R +++ L++++ V++ DLKP NIL
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF--VVYRDLKPANIL 324
Query: 427 LTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKIS 486
L E G ++I+D GL+ + GT+ Y+ PE V+ K S
Sbjct: 325 LDEH---GHVRISDLGLACDFSK---------KKPHASVGTHGYMAPE--VLQKGVAYDS 370
Query: 487 SKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIR 546
S D +S+G + ++ L G PF ++++ + L V+ + S E + +
Sbjct: 371 S-ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM-AVEL--PDSFSPELRSLLE 426
Query: 547 SCLAYRKEDRI-----DVISLARHDY-------------LQPP-VPKHGRQSASSSAPVG 587
L R+ + + PP +P G +A+ + +G
Sbjct: 427 GLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIG 486
Query: 588 H--------SPASSG-QNQNSGGASTQSSAVQQSFATGLFSGMNASSS 626
Q T S QQ A +F +NA +
Sbjct: 487 SFDEEDTKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTINAETD 534
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 138 bits (351), Expect = 1e-36
Identities = 81/288 (28%), Positives = 133/288 (46%), Gaps = 28/288 (9%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
Y++ LG+G F +V A K Q+ VA K +++ + KK++ RE + K
Sbjct: 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKF--ISR--QLLKKSDMHMRVEREISYLKL 65
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKY 407
L HP ++KLYDV + V+EY G D Y+ + K + E E R Q++ A++Y
Sbjct: 66 LRHPHIIKLYDVITTPTDIVM-VIEYAGGELFD-YIVEKKRMTEDEGRRFFQQIICAIEY 123
Query: 408 LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGT 467
+ K ++H DLKP N+LL + +KI DFGLS +M + + TS G+
Sbjct: 124 CHRHK--IVHRDLKPENLLLDDN---LNVKIADFGLSNIM-----TDGNFLK-TS--CGS 170
Query: 468 YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKAT 527
Y PE V +VDVWS G++ Y L G+ PF ++ + ++ +
Sbjct: 171 PNYAAPE---VINGKLYAGPEVDVWSCGIVLYVMLVGRLPF-DDEFIPNLFKK--VNSC- 223
Query: 528 EVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKH 575
+ +S A+ IR + RI + + R + +P +
Sbjct: 224 --VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDY 269
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 139 bits (353), Expect = 2e-36
Identities = 78/325 (24%), Positives = 127/325 (39%), Gaps = 39/325 (12%)
Query: 242 DQSRFNNHPVLSDSYLIGYKNLHIRELKRIHN---------EDQSRFNNHPVLSDRYLLL 292
D P L D L ++ L EL + R + D + +L
Sbjct: 8 DPGFLGLEP-LLDLLLGVHQELGASELAQDKYVADFLQWAEPIVVRLKEVRLQRDDFEIL 66
Query: 293 MLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
++G+G FSEV + + A K+ +NK + K + E ++ D
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKI--MNKW--DMLKRGEVSCFREERDVLVNGDRRW 122
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH-KTIAEREARSIVMQVVSALKYLNEI 411
+ +L+ F+ D N V+EY G DL L + + I AR + ++V A+ ++ +
Sbjct: 123 ITQLHFAFQ-DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL 181
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
+H D+KP NILL CG I++ DFG + + G + GT YL
Sbjct: 182 G--YVHRDIKPDNILLDR---CGHIRLADFGSCLKLRAD------GTVRSLVAVGTPDYL 230
Query: 472 PPECFVVGKNPPKISSK----VDVWSVGVIFYQCLYGKKPF---GHNQSQATILEENTIL 524
PE + + D W++GV Y+ YG+ PF ++ I+ L
Sbjct: 231 SPE-ILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHL 289
Query: 525 KATEVQFANKPTVSNEAKGFIRSCL 549
V EA+ FI+ L
Sbjct: 290 SLPL----VDEGVPEEARDFIQRLL 310
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 136 bits (346), Expect = 2e-36
Identities = 68/293 (23%), Positives = 115/293 (39%), Gaps = 26/293 (8%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR 340
+ V +D +M LG+G + V K + + +A K + + +E K L
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE------QKRLLM 54
Query: 341 EYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFY---LKQHKTIAEREARS 396
+ +I + +D P V Y +E D FY + + +TI E
Sbjct: 55 DLDISMRTVDCPFTVTFYGAL-FREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGK 113
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
I + +V AL++L+ K VIH D+KP N+L+ G++K+ DFG+S +
Sbjct: 114 IAVSIVKALEHLHS-KLSVIHRDVKPSNVLINAL---GQVKMCDFGISGYLV-------D 162
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQAT 516
+ AG Y+ PE N S K D+WS+G+ + + P+ S T
Sbjct: 163 DVAKDID-AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY---DSWGT 218
Query: 517 ILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
++ + S E F CL ++R L +H +
Sbjct: 219 PFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT 271
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 136 bits (345), Expect = 5e-36
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 26/225 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G G F VH+A + VA K+ L + +D A + LRE I K L HP +V
Sbjct: 45 IGAGSFGTVHRA-EWHGS-DVAVKI--LME---QDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYL---KQHKTIAEREARSIVMQVVSALKYLNEI 411
+ V EY L L + + ER S+ V + YL+
Sbjct: 98 LFMGAV-TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYL 471
PP++H +LK N+L+ + K+ DFGLS++ + + AGT ++
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTV---KVCDFGLSRLKASTFLS-------SKSAAGTPEWM 206
Query: 472 PPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQA 515
PE ++ P + K DV+S GVI ++ ++P+ N +Q
Sbjct: 207 APEVL---RDEP-SNEKSDVYSFGVILWELATLQQPWGNLNPAQV 247
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 136 bits (344), Expect = 5e-36
Identities = 69/286 (24%), Positives = 113/286 (39%), Gaps = 37/286 (12%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LGKG + V+ DL Q +A K + + Y + E +HK L H +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPE-------RDSRYSQPLHEEIALHKHLKHKNI 81
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREA--RSIVMQVVSALKYLNE 410
V+ + +E G L + + + E Q++ LKYL++
Sbjct: 82 VQYLG-SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 140
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
+ ++H D+K N+L+ + G +KI+DFG SK + N T GT Y
Sbjct: 141 NQ--IVHRDIKGDNVLINTYS--GVLKISDFGTSKRLAGIN-------PCTETFTGTLQY 189
Query: 471 LPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGH-NQSQATILEENTILKATEV 529
+ PE ++ K P D+WS+G + GK PF + QA + + +
Sbjct: 190 MAPE--IIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK---VGMFKV- 243
Query: 530 QFANKPTV----SNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPP 571
P + S EAK FI C + R L ++L+
Sbjct: 244 ----HPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVS 285
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 133 bits (337), Expect = 2e-35
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 27/228 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G GGF +V++A VA K D ++ + I++ +E + L HP ++
Sbjct: 15 IGIGGFGKVYRA-FWIGD-EVAVKA--ARHD-PDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP- 413
L V + + C V+E+ G L+ L + I + +Q+ + YL++
Sbjct: 70 ALRGVC-LKEPNLCLVMEFARGGPLNRVLSGKR-IPPDILVNWAVQIARGMNYLHDEAIV 127
Query: 414 PVIHYDLKPGNILLTEGNVCGE-----IKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
P+IH DLK NIL+ + G+ +KITDFGL++ AG Y
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK---------MSAAGAY 178
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQA 515
++ PE + S DVWS GV+ ++ L G+ PF G +
Sbjct: 179 AWMAPEVI---RASM-FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV 222
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 140 bits (355), Expect = 3e-35
Identities = 49/230 (21%), Positives = 91/230 (39%), Gaps = 35/230 (15%)
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLK-EQRYVACKVHQLNKDWKEDKKANYIKHALREY 342
+++ +Y + + GG ++ A D R V K + D A A+ E
Sbjct: 77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD------AEAQAMAMAER 130
Query: 343 NIHKALDHPRVVKLYDVFEIDANSFCT----VLEYCDGHDLDFYLKQHKTIAEREARSIV 398
+ HP +V++++ E V+EY G L Q + EA + +
Sbjct: 131 QFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK--LPVAEAIAYL 188
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGM 458
++++ AL YL+ I +++ DLKP NI+LTE + K+ D G ++
Sbjct: 189 LEILPALSYLHSI--GLVYNDLKPENIMLTEEQL----KLIDLGAVSRINS--------- 233
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
GT + PE + + P +++ D+++VG
Sbjct: 234 --FGYLYGTPGFQAPE---IVRTGPTVAT--DIYTVGRTLAALTLDLPTR 276
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 134 bits (339), Expect = 5e-35
Identities = 72/316 (22%), Positives = 117/316 (37%), Gaps = 35/316 (11%)
Query: 262 NLHIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQ 321
++ +I E F ++ L +G+G + V+K + +A K +
Sbjct: 2 SIESSGKLKISPEQHWDFT-----AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIR 56
Query: 322 LNKDWKEDKKANYIKHALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLD 380
D KE K L + ++ ++ D P +V+ Y +E
Sbjct: 57 STVDEKE------QKQLLMDLDVVMRSSDCPYIVQFYGAL-FREGDCWICMELMSTSFDK 109
Query: 381 FYLK----QHKTIAEREARSIVMQVVSALKYL-NEIKPPVIHYDLKPGNILLTEGNVCGE 435
FY I E I + V AL +L +K +IH D+KP NILL G
Sbjct: 110 FYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRS---GN 164
Query: 436 IKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVG 495
IK+ DFG+S + + T AG Y+ PE + + DVWS+G
Sbjct: 165 IKLCDFGISGQLV-------DSIAKTRD-AGCRPYMAPERIDPSASRQGYDVRSDVWSLG 216
Query: 496 VIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKPTV--SNEAKGFIRSCLAYRK 553
+ Y+ G+ P+ S L ++K Q +N S F+ CL +
Sbjct: 217 ITLYELATGRFPYPKWNSVFDQLT--QVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDE 274
Query: 554 EDRIDVISLARHDYLQ 569
R L +H ++
Sbjct: 275 SKRPKYKELLKHPFIL 290
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 134 bits (339), Expect = 5e-35
Identities = 69/294 (23%), Positives = 117/294 (39%), Gaps = 26/294 (8%)
Query: 280 NNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHAL 339
N V +D +M LG+G + V K + + +A K + + +E K L
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE------QKRLL 97
Query: 340 REYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFY---LKQHKTIAEREAR 395
+ +I + +D P V Y +E D FY + + +TI E
Sbjct: 98 MDLDISMRTVDCPFTVTFYGAL-FREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILG 156
Query: 396 SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPD 455
I + +V AL++L+ K VIH D+KP N+L+ G++K+ DFG+S + +
Sbjct: 157 KIAVSIVKALEHLHS-KLSVIHRDVKPSNVLINAL---GQVKMCDFGISGYLVDS----- 207
Query: 456 HGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA 515
+ T AG Y+ PE N S K D+WS+G+ + + P+ +
Sbjct: 208 --VAKTID-AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF 264
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
L +++ S E F CL ++R L +H +
Sbjct: 265 QQL--KQVVE-EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT 315
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 138 bits (348), Expect = 9e-35
Identities = 70/272 (25%), Positives = 110/272 (40%), Gaps = 28/272 (10%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR 340
PV + + +LGKGGF EV + ACK L K KK AL
Sbjct: 178 RQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKK--LEKK--RIKKRKGEAMALN 233
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA--EREARSIV 398
E I + ++ VV L +E ++ C VL +G DL F++ E A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYE-TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGM 458
++ L+ L+ + +++ DLKP NILL + G I+I+D GL+ + E
Sbjct: 293 AEICCGLEDLHRER--IVYRDLKPENILLDDH---GHIRISDLGLAVHVPEG-------- 339
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATI 517
GT Y+ PE VV S D W++G + Y+ + G+ PF +
Sbjct: 340 QTIKGRVGTVGYMAPE--VVKNERYTFS--PDWWALGCLLYEMIAGQSPFQQRKKKIKRE 395
Query: 518 LEENTILKATEVQFANKPTVSNEAKGFIRSCL 549
E + + ++ S +A+ L
Sbjct: 396 EVERLVKEV-PEEY--SERFSPQARSLCSQLL 424
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 132 bits (334), Expect = 1e-34
Identities = 61/220 (27%), Positives = 96/220 (43%), Gaps = 34/220 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G+G F V KA + + VA K + + K + E ++HP +V
Sbjct: 16 VGRGAFGVVCKA-KWRAK-DVAIKQIESESERKA---------FIVELRQLSRVNHPNIV 64
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYL---KQHKTIAEREARSIVMQVVSALKYLNEI 411
KLY N C V+EY +G L L + A S +Q + YL+ +
Sbjct: 65 KLYGAC---LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121
Query: 412 KP-PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
+P +IH DLKP N+LL G +KI DFG + + +T+ G+ +
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTV--LKICDFGTACDIQTH---------MTN-NKGSAAW 169
Query: 471 LPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGH 510
+ PE F + S K DV+S G+I ++ + +KPF
Sbjct: 170 MAPEVF---EGSN-YSEKCDVFSWGIILWEVITRRKPFDE 205
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 135 bits (341), Expect = 1e-34
Identities = 80/334 (23%), Positives = 134/334 (40%), Gaps = 34/334 (10%)
Query: 232 IRELKRIHNEDQSRFNNHPV----LSDSYLIGYKNLHIRELKRIHNEDQ---------SR 278
+R+L++ + ++ N L D + Y + L+R N + S+
Sbjct: 6 LRQLEQFILDGPAQTNGQCFSVETLLDILICLYDECNNSPLRREKNILEYLEWAKPFTSK 65
Query: 279 FNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA 338
+ + + +L ++G+G F EV + A K+ LNK E K
Sbjct: 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKI--LNKW--EMLKRAETACF 121
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI-AEREARSI 397
E ++ D + L+ F+ D N+ V++Y G DL L + + E AR
Sbjct: 122 REERDVLVNGDSKWITTLHYAFQ-DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFY 180
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ ++V A+ ++++ +H D+KP NIL+ G I++ DFG + E+ G
Sbjct: 181 LAEMVIAIDSVHQLH--YVHRDIKPDNILMDM---NGHIRLADFGSCLKLMED------G 229
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSK-VDVWSVGVIFYQCLYGKKPFGHNQSQAT 516
+S GT Y+ PE + D WS+GV Y+ LYG+ PF T
Sbjct: 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 289
Query: 517 ILEENTILKATEVQF-ANKPTVSNEAKGFIRSCL 549
+ QF VS AK IR +
Sbjct: 290 Y--GKIMNHKERFQFPTQVTDVSENAKDLIRRLI 321
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 133 bits (336), Expect = 2e-34
Identities = 77/295 (26%), Positives = 128/295 (43%), Gaps = 41/295 (13%)
Query: 260 YKNLHIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKV 319
K + + + ++ N L + + LG G F V + + A K+
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQ-FDRIKTLGTGSFGRVMLVKHKESGNHYAMKI 73
Query: 320 HQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL 379
L+K K I+H L E I +A++ P +VKL F+ D ++ V+EY G ++
Sbjct: 74 --LDKQKVVKLKQ--IEHTLNEKRILQAVNFPFLVKLEFSFK-DNSNLYMVMEYVAGGEM 128
Query: 380 DFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKIT 439
+L++ +E AR Q+V +YL+ + +I+ DLKP N+L+ + G I++T
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQ---GYIQVT 183
Query: 440 DFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSK-----VDVWSV 494
DFG +K + T GT L PE I SK VD W++
Sbjct: 184 DFGFAKRVK----------GRTWTLCGTPEALAPEI---------ILSKGYNKAVDWWAL 224
Query: 495 GVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCL 549
GV+ Y+ G PF +Q I+ +V+F S++ K +R+ L
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIY---EKIVSG-KVRF--PSHFSSDLKDLLRNLL 273
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 133 bits (336), Expect = 2e-34
Identities = 71/346 (20%), Positives = 121/346 (34%), Gaps = 62/346 (17%)
Query: 262 NLHIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQ 321
L ++ KR+ + + D + + LG G V K +A K+
Sbjct: 8 ELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH 67
Query: 322 LNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDF 381
L +RE + + P +V Y F D +E+ DG LD
Sbjct: 68 LEIKPAI------RNQIIRELQVLHECNSPYIVGFYGAFYSD-GEISICMEHMDGGSLDQ 120
Query: 382 YLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDF 441
LK+ I E+ + + V+ L YL E ++H D+KP NIL+ GEIK+ DF
Sbjct: 121 VLKKAGRIPEQILGKVSIAVIKGLTYLREKH-KIMHRDVKPSNILVNSR---GEIKLCDF 176
Query: 442 GLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQC 501
G+S + + + + GT Y+ PE S + D+WS+G+ +
Sbjct: 177 GVSGQLID---------SMANSFVGTRSYMSPERL----QGTHYSVQSDIWSMGLSLVEM 223
Query: 502 LYGKKPFGHNQSQATILEENTILKATEVQFANKPTV------------------------ 537
G+ P ++ L ++ + +P
Sbjct: 224 AVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDY 283
Query: 538 --------------SNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
S E + F+ CL +R D+ L H +++
Sbjct: 284 IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 329
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 133 bits (336), Expect = 4e-34
Identities = 82/318 (25%), Positives = 146/318 (45%), Gaps = 31/318 (9%)
Query: 239 HNEDQSRFNNHPVLSDSYLIGYKNLHIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKG 298
++ + P + Y G I E K N +S + + + LL ++G+G
Sbjct: 4 YHHHHHHDYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRG 63
Query: 299 GFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI-HKALDHPRVVKLY 357
+++V K R A +V + K+ D + I E ++ +A +HP +V L+
Sbjct: 64 SYAKVLLVRLKKTDRIYAMRV--VKKELVNDDED--IDWVQTEKHVFEQASNHPFLVGLH 119
Query: 358 DVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIH 417
F+ + + V+EY +G DL F++++ + + E AR ++ AL YL+E +I+
Sbjct: 120 SCFQTE-SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG--IIY 176
Query: 418 YDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFV 477
DLK N+LL G IK+TD+G+ K E P D TS GT Y+ PE +
Sbjct: 177 RDLKLDNVLLDSE---GHIKLTDYGMCK----EGLRPG---DTTSTFCGTPNYIAPE--I 224
Query: 478 VGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENT------ILKATEVQF 531
+ S VD W++GV+ ++ + G+ PF S + IL+ +++
Sbjct: 225 LRGEDYGFS--VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRI 281
Query: 532 ANKPTVSNEAKGFIRSCL 549
++S +A ++S L
Sbjct: 282 --PRSLSVKAASVLKSFL 297
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 130 bits (329), Expect = 7e-34
Identities = 57/273 (20%), Positives = 99/273 (36%), Gaps = 37/273 (13%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+GKG F +V+ E VA ++ ++ + + +K RE ++ H VV
Sbjct: 41 IGKGRFGQVYHGRWHGE---VAIRL--IDIE---RDNEDQLKAFKREVMAYRQTRHENVV 92
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYL-KQHKTIAEREARSIVMQVVSALKYLNEIKP 413
+ + C G L + + + R I ++V + YL+
Sbjct: 93 LFMGAC-MSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH--AK 149
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
++H DLK N+ G V ITDFGL + G +L P
Sbjct: 150 GILHKDLKSKNVFYDNGKV----VITDFGLFSISGVLQAGRREDK--LRIQNGWLCHLAP 203
Query: 474 ECFVVGKNPPKI-----SSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATE 528
E + S DV+++G I+Y+ + PF ++A I +
Sbjct: 204 EIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW---------Q 254
Query: 529 VQFANKPTVSN-----EAKGFIRSCLAYRKEDR 556
+ KP +S E + C A+ +E+R
Sbjct: 255 MGTGMKPNLSQIGMGKEISDILLFCWAFEQEER 287
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 133 bits (337), Expect = 2e-33
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 29/274 (10%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR 340
P+ D +L +LG+GGF EV + ACK LNK K KK + A+
Sbjct: 179 AQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKK--LNK--KRLKKRKGYQGAMV 234
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL----KQHKTIAEREARS 396
E I + +V L FE C V+ +G D+ +++ + + E A
Sbjct: 235 EKKILAKVHSRFIVSLAYAFE-TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
Q+VS L++L++ +I+ DLKP N+LL + G ++I+D GL+ E
Sbjct: 294 YTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDD---GNVRISDLGLAV----ELKAGQ- 343
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQA 515
T AGT ++ PE ++ S VD +++GV Y+ + + PF +
Sbjct: 344 --TKTKGYAGTPGFMAPE--LLLGEEYDFS--VDYFALGVTLYEMIAARGPFRARGEKVE 397
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCL 549
+ +L+ V + S +K F + L
Sbjct: 398 NKELKQRVLEQ-AVTY--PDKFSPASKDFCEALL 428
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 128 bits (324), Expect = 4e-33
Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 40/264 (15%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDH 350
+L LG G F VH RY A KV L K+ + ++H E + + H
Sbjct: 10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKV--LKKE--IVVRLKQVEHTNDERLMLSIVTH 65
Query: 351 PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNE 410
P +++++ F+ DA +++Y +G +L L++ + A+ +V AL+YL+
Sbjct: 66 PFIIRMWGTFQ-DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 124
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
+I+ DLKP NILL + G IKITDFG +K + D+T GT Y
Sbjct: 125 KD--IIYRDLKPENILLDKN---GHIKITDFGFAKYVP----------DVTYTLCGTPDY 169
Query: 471 LPPECFVVGKNPPKISSK-----VDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILK 525
+ PE +S+K +D WS G++ Y+ L G PF ++ + E+ IL
Sbjct: 170 IAPEV---------VSTKPYNKSIDWWSFGILIYEMLAGYTPF-YDSNTMKTYEK--ILN 217
Query: 526 ATEVQFANKPTVSNEAKGFIRSCL 549
A E++F P + + K + +
Sbjct: 218 A-ELRF--PPFFNEDVKDLLSRLI 238
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 128 bits (324), Expect = 7e-33
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 31/266 (11%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI-HKALD 349
LL ++G+G +++V K R A KV + K+ D + I E ++ +A +
Sbjct: 13 LLRVIGRGSYAKVLLVRLKKTDRIYAMKV--VKKELVNDDED--IDWVQTEKHVFEQASN 68
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
HP +V L+ F+ + + V+EY +G DL F++++ + + E AR ++ AL YL+
Sbjct: 69 HPFLVGLHSCFQTE-SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
E +I+ DLK N+LL G IK+TD+G+ K E P D TS GT
Sbjct: 128 ERG--IIYRDLKLDNVLLDSE---GHIKLTDYGMCK----EGLRPG---DTTSTFCGTPN 175
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENT------I 523
Y+ PE ++ S VD W++GV+ ++ + G+ PF S + I
Sbjct: 176 YIAPE--ILRGEDYGFS--VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 231
Query: 524 LKATEVQFANKPTVSNEAKGFIRSCL 549
L+ +++ ++S +A ++S L
Sbjct: 232 LEK-QIRI--PRSLSVKAASVLKSFL 254
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 128 bits (324), Expect = 8e-33
Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 29/278 (10%)
Query: 273 NEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKA 332
N+++ + D ++L +LGKG F +V A K ++ A K L KD
Sbjct: 4 NKERPSLQIKLKIED-FILHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDD 60
Query: 333 NYIKHALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE 391
++ + E + A +HP + ++ F+ + V+EY +G DL ++++
Sbjct: 61 --VECTMVEKRVLSLAWEHPFLTHMFCTFQ-TKENLFFVMEYLNGGDLMYHIQSCHKFDL 117
Query: 392 REARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEEN 451
A +++ L++L+ +++ DLK NILL + G IKI DFG+ K EN
Sbjct: 118 SRATFYAAEIILGLQFLHSKG--IVYRDLKLDNILLDKD---GHIKIADFGMCK----EN 168
Query: 452 YNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHN 511
D T+ GT Y+ PE ++ S VD WS GV+ Y+ L G+ PF H
Sbjct: 169 MLGD---AKTNTFCGTPDYIAPE--ILLGQKYNHS--VDWWSFGVLLYEMLIGQSPF-HG 220
Query: 512 QSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCL 549
Q + + +I + + EAK +
Sbjct: 221 QDEEELFH--SIRMD-NPFY--PRWLEKEAKDLLVKLF 253
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 128 bits (323), Expect = 8e-33
Identities = 77/263 (29%), Positives = 123/263 (46%), Gaps = 31/263 (11%)
Query: 291 LLMLLGKGGFSEV---HKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
LL +LGKGG+ +V K + A KV L K + A H E NI +
Sbjct: 21 LLRVLGKGGYGKVFQVRKVTGANTGKIFAMKV--LKKA-MIVRNAKDTAHTKAERNILEE 77
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKY 407
+ HP +V L F+ +LEY G +L L++ E A + ++ AL +
Sbjct: 78 VKHPFIVDLIYAFQ-TGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 408 LNEIKPPVIHYDLKPGNILL-TEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
L++ +I+ DLKP NI+L +G+ +K+TDFGL K E+ + +T G
Sbjct: 137 LHQKG--IIYRDLKPENIMLNHQGH----VKLTDFGLCK----ESIHDG---TVTHTFCG 183
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKA 526
T Y+ PE ++ ++ + VD WS+G + Y L G PF + TI + ILK
Sbjct: 184 TIEYMAPE--ILMRSGHNRA--VDWWSLGALMYDMLTGAPPFTGENRKKTI---DKILKC 236
Query: 527 TEVQFANKPTVSNEAKGFIRSCL 549
++ P ++ EA+ ++ L
Sbjct: 237 -KLNL--PPYLTQEARDLLKKLL 256
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 128 bits (323), Expect = 1e-32
Identities = 84/260 (32%), Positives = 126/260 (48%), Gaps = 29/260 (11%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDH 350
L LLGKG F +V + RY A K+ L K+ K + H + E + + H
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKI--LRKEVIIAKDE--VAHTVTESRVLQNTRH 64
Query: 351 PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNE 410
P + L F+ + C V+EY +G +L F+L + + E AR ++VSAL+YL+
Sbjct: 65 PFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 411 IKPPVIHYDLKPGNILL-TEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
V++ D+K N++L +G+ IKITDFGL K E + GT
Sbjct: 124 RD--VVYRDIKLENLMLDKDGH----IKITDFGLCK----EGISDG---ATMKTFCGTPE 170
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEV 529
YL PE V+ N + VD W +GV+ Y+ + G+ PF +NQ + E IL E+
Sbjct: 171 YLAPE--VLEDNDYGRA--VDWWGLGVVMYEMMCGRLPF-YNQDHERLFE--LILME-EI 222
Query: 530 QFANKPTVSNEAKGFIRSCL 549
+F T+S EAK + L
Sbjct: 223 RF--PRTLSPEAKSLLAGLL 240
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 129 bits (327), Expect = 1e-32
Identities = 89/280 (31%), Positives = 129/280 (46%), Gaps = 26/280 (9%)
Query: 270 RIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKED 329
E H V + + L LLGKG F +V + RY A K+ L K+
Sbjct: 131 AEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKI--LKKEVIVA 188
Query: 330 KKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI 389
K + H L E + + HP + L F+ + C V+EY +G +L F+L + +
Sbjct: 189 KDE--VAHTLTENRVLQNSRHPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRERVF 245
Query: 390 AEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE 449
+E AR ++VSAL YL+ K V++ DLK N++L + G IKITDFGL K
Sbjct: 246 SEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKD---GHIKITDFGLCK---- 297
Query: 450 ENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFG 509
E GT YL PE V+ N + VD W +GV+ Y+ + G+ PF
Sbjct: 298 EGIKDG---ATMKTFCGTPEYLAPE--VLEDNDYGRA--VDWWGLGVVMYEMMCGRLPF- 349
Query: 510 HNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCL 549
+NQ + E IL E++F T+ EAK + L
Sbjct: 350 YNQDHEKLFE--LILME-EIRF--PRTLGPEAKSLLSGLL 384
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 127 bits (321), Expect = 1e-32
Identities = 79/287 (27%), Positives = 127/287 (44%), Gaps = 33/287 (11%)
Query: 267 ELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVH---KAFDLKEQRYVACKVHQLN 323
+K I + + ++ LL +LG+G F +V K ++ A KV L
Sbjct: 4 SIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKV--LK 61
Query: 324 KDW-KEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFY 382
K K + E +I ++HP +VKL+ F+ +L++ G DL
Sbjct: 62 KATLKVRDRV----RTKMERDILVEVNHPFIVKLHYAFQ-TEGKLYLILDFLRGGDLFTR 116
Query: 383 LKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFG 442
L + E + + + ++ AL +L+ + +I+ DLKP NILL E G IK+TDFG
Sbjct: 117 LSKEVMFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDEE---GHIKLTDFG 171
Query: 443 LSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL 502
LSK E+ + + GT Y+ PE VV + S D WS GV+ ++ L
Sbjct: 172 LSK----ESIDHE---KKAYSFCGTVEYMAPE--VVNRRGHTQS--ADWWSFGVLMFEML 220
Query: 503 YGKKPFGHNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCL 549
G PF + + + ILKA ++ +S EA+ +R
Sbjct: 221 TGTLPF-QGKDRKETMT--MILKA-KLGM--PQFLSPEAQSLLRMLF 261
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 125 bits (315), Expect = 2e-32
Identities = 30/229 (13%), Positives = 70/229 (30%), Gaps = 35/229 (15%)
Query: 295 LGKGGFSEVHKAFDLKEQRY----VACKVHQLNKDWKEDKKANYIKHALREYNIHKALDH 350
L + E+ K R+ + KV L D + E + H
Sbjct: 18 LNENHSGELWKG------RWQGNDIVVKV--LKV---RDWSTRKSRDFNEECPRLRIFSH 66
Query: 351 PRVVKLY-DVFEIDANSFCTVLEYCDGHDLDFYL--KQHKTIAEREARSIVMQVVSALKY 407
P V+ + A + + L L + + + +A + + + +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF 126
Query: 408 LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGT 467
L+ ++P + + L ++++ E +I+ +
Sbjct: 127 LHTLEPLIPRHALNSRSVMIDEDMTA---RISMADVKFSFQSPG------------RMYA 171
Query: 468 YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQA 515
++ PE K D+WS V+ ++ + + PF + +
Sbjct: 172 PAWVAPEAL-QKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI 219
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 127 bits (322), Expect = 2e-32
Identities = 88/260 (33%), Positives = 133/260 (51%), Gaps = 28/260 (10%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI-HKALD 349
L ++GKG F +V A E+ + A KV L K KK KH + E N+ K +
Sbjct: 42 FLKVIGKGSFGKVLLARHKAEEVFYAVKV--LQKKAILKKKE--EKHIMSERNVLLKNVK 97
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
HP +V L+ F+ A+ VL+Y +G +L ++L++ + E AR ++ SAL YL+
Sbjct: 98 HPFLVGLHFSFQ-TADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLH 156
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
+ +++ DLKP NILL G I +TDFGL K EN + TS GT
Sbjct: 157 SLN--IVYRDLKPENILLDSQ---GHIVLTDFGLCK----ENIEHN---STTSTFCGTPE 204
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEV 529
YL PE V+ K P + VD W +G + Y+ LYG PF ++++ A + + IL +
Sbjct: 205 YLAPE--VLHKQPYDRT--VDWWCLGAVLYEMLYGLPPF-YSRNTAEMYD--NILNK-PL 256
Query: 530 QFANKPTVSNEAKGFIRSCL 549
Q KP ++N A+ + L
Sbjct: 257 QL--KPNITNSARHLLEGLL 274
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 125 bits (315), Expect = 4e-32
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 22/226 (9%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
+G G F V+K VA K+ L D + E + + H ++
Sbjct: 44 IGSGSFGTVYKG-KWHGD--VAVKI--LKVV---DPTPEQFQAFRNEVAVLRKTRHVNIL 95
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVMQVVSALKYLNEIKP 413
+ ++ V ++C+G L +L +T + I Q + YL+
Sbjct: 96 LFMGY--MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA--K 151
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPP 473
+IH D+K NI L EG KI DFGL+ V + + Q G+ ++ P
Sbjct: 152 NIIHRDMKSNNIFLHEGLTV---KIGDFGLATVKSRWSGSQQ-----VEQPTGSVLWMAP 203
Query: 474 ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILE 519
E + N P S + DV+S G++ Y+ + G+ P+ H ++ I+
Sbjct: 204 EVIRMQDNNP-FSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF 248
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 124 bits (314), Expect = 4e-32
Identities = 52/228 (22%), Positives = 92/228 (40%), Gaps = 29/228 (12%)
Query: 295 LGKGGFSEVHKAFDLKEQRY---VACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
+G G F V+K ++ VA K+ LN ++ E + + H
Sbjct: 32 IGSGSFGTVYKG------KWHGDVAVKM--LNVT---APTPQQLQAFKNEVGVLRKTRHV 80
Query: 352 RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVMQVVSALKYLNE 410
++ A V ++C+G L +L +T ++ I Q + YL+
Sbjct: 81 NILLFMGY--STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH- 137
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
+IH DLK NI L E N KI DFGL+ + + Q +G+ +
Sbjct: 138 -AKSIIHRDLKSNNIFLHEDNTV---KIGDFGLATEKSRWSGS-----HQFEQLSGSILW 188
Query: 471 LPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATI 517
+ PE + ++ S + DV++ G++ Y+ + G+ P+ N I
Sbjct: 189 MAPE-VIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 235
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 124 bits (315), Expect = 5e-32
Identities = 78/310 (25%), Positives = 131/310 (42%), Gaps = 50/310 (16%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
++Y + +G+G + V K + + VA K ++D KK ALRE + K
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKI-----ALREIRMLK 57
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVMQVVSAL 405
L HP +V L +VF V EYCD H + L +++ + E +SI Q + A+
Sbjct: 58 QLKHPNLVNLLEVFRRK-RRLHLVFEYCD-HTVLHELDRYQRGVPEHLVKSITWQTLQAV 115
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
+ ++ IH D+KP NIL+T+ IK+ DFG ++++ + + A
Sbjct: 116 NFCHKHN--CIHRDVKPENILITK---HSVIKLCDFGFARLLTGPSDY------YDDEVA 164
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF----------------- 508
T WY PE +VG + VDVW++G +F + L P
Sbjct: 165 -TRWYRSPE-LLVGD--TQYGPPVDVWAIGCVFAE-LLSGVPLWPGKSDVDQLYLIRKTL 219
Query: 509 G----HNQSQATILEENTILKATEVQFANK-----PTVSNEAKGFIRSCLAYRKEDRIDV 559
G +Q + + + +K + + P +S A G ++ CL +R+
Sbjct: 220 GDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTC 279
Query: 560 ISLARHDYLQ 569
L H Y +
Sbjct: 280 EQLLHHPYFE 289
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 124 bits (313), Expect = 2e-31
Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 27/265 (10%)
Query: 291 LLMLLGKGGFSEVH---KAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI-HK 346
LL +LG G + +V K + A KV L K +KA +H E +
Sbjct: 58 LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKV--LKKA-TIVQKAKTTEHTRTERQVLEH 114
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
P +V L+ F+ +L+Y +G +L +L Q + E E + V ++V AL+
Sbjct: 115 IRQSPFLVTLHYAFQ-TETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 173
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKV-MDEENYNPDHGMDLTSQGA 465
+L+++ +I+ D+K NILL G + +TDFGLSK + +E +
Sbjct: 174 HLHKLG--IIYRDIKLENILLDSN---GHVVLTDFGLSKEFVADET-------ERAYDFC 221
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATILEENTIL 524
GT Y+ P+ +V VD WS+GV+ Y+ L G PF + + IL
Sbjct: 222 GTIEYMAPD--IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL 279
Query: 525 KATEVQFANKPTVSNEAKGFIRSCL 549
K+ E + +S AK I+ L
Sbjct: 280 KS-EPPY--PQEMSALAKDLIQRLL 301
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 122 bits (309), Expect = 3e-31
Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 23/223 (10%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+Y L +G+G + V KA + + VA K +L+ D E ++ ALRE + K
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSS----ALREICLLK 56
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVMQVVSAL 405
L H +V+L+DV V E+CD DL Y + +S + Q++ L
Sbjct: 57 ELKHKNIVRLHDVL-HSDKKLTLVFEFCD-QDLKKYFDSCNGDLDPEIVKSFLFQLLKGL 114
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
+ + V+H DLKP N+L+ GE+K+ +FGL++ P S
Sbjct: 115 GFCHSRN--VLHRDLKPQNLLINRN---GELKLANFGLARAFG----IPVRCY---SAEV 162
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PP+ K S+ +D+WS G IF + +P
Sbjct: 163 VTLWYRPPDVLFGAK---LYSTSIDMWSAGCIFAELANAGRPL 202
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 122 bits (309), Expect = 4e-31
Identities = 76/321 (23%), Positives = 124/321 (38%), Gaps = 54/321 (16%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
RY + +G G + V+KA D +VA K ++ +RE + +
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNG--GGGGGGLPISTVREVALLR 66
Query: 347 AL---DHPRVVKLYDVFEIDANSFCT----VLEYCDGHDLDFYLKQHKT--IAEREARSI 397
L +HP VV+L DV V E+ D DL YL + + + +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDL 125
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ Q + L +L+ ++H DLKP NIL+T G G +K+ DFGL+++ +
Sbjct: 126 MRQFLRGLDFLHANC--IVHRDLKPENILVTSG---GTVKLADFGLARIYSYQ------- 173
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA-- 515
M LT T WY PE ++ ++ VD+WSVG IF + ++ +KP S+A
Sbjct: 174 MALTPV-VVTLWYRAPE-VLLQS---TYATPVDMWSVGCIFAE-MFRRKPLFCGNSEADQ 227
Query: 516 ---------TILEEN----------TILKATEVQFANK-PTVSNEAKGFIRSCLAYRKED 555
E++ + P + + L +
Sbjct: 228 LGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHK 287
Query: 556 RIDVISLARHDYLQ--PPVPK 574
RI +H YL P+
Sbjct: 288 RISAFRALQHSYLHKDEGNPE 308
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 123 bits (311), Expect = 4e-31
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 21/224 (9%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
+ RY L LG+G F+ V+KA D + VA K +L + N ALRE +
Sbjct: 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRT--ALREIKLL 66
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVMQVVSA 404
+ L HP ++ L D F ++ V ++ + DL+ +K + + ++ ++ +
Sbjct: 67 QELSHPNIIGLLDAFGHK-SNISLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLMTLQG 124
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
L+YL++ ++H DLKP N+LL E G +K+ DFGL+K +P+ T Q
Sbjct: 125 LEYLHQHW--ILHRDLKPNNLLLDEN---GVLKLADFGLAKSFG----SPNRAY--THQV 173
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + VD+W+VG I + L + PF
Sbjct: 174 V-TRWYRAPELLFGAR---MYGVGVDMWAVGCILAE-LLLRVPF 212
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 121 bits (306), Expect = 5e-31
Identities = 71/226 (31%), Positives = 108/226 (47%), Gaps = 39/226 (17%)
Query: 295 LGKGGFSEVHKAF--DLKEQRYVA---CKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
LG G F V K + K + VA K + K++ L E N+ + LD
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE--------LLAEANVMQQLD 76
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
+P +V++ + +A S+ V+E + L+ YL+Q++ + ++ +V QV +KYL
Sbjct: 77 NPYIVRMIGI--CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 134
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGT 467
E +H DL N+LL + KI+DFGLSK + DE Y +Q G
Sbjct: 135 ESN--FVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYY--------KAQTHGK 181
Query: 468 Y---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFG 509
+ WY PEC K SSK DVWS GV+ ++ YG+KP+
Sbjct: 182 WPVKWY-APECINYY----KFSSKSDVWSFGVLMWEAFSYGQKPYR 222
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 122 bits (308), Expect = 5e-31
Identities = 83/327 (25%), Positives = 126/327 (38%), Gaps = 65/327 (19%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDK----KANYIKHALR 340
L RY+ L LG GG V A D + VA K K +KHALR
Sbjct: 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIK-----------KIVLTDPQSVKHALR 57
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-------HKTIAERE 393
E I + LDH +VK++++ + + + Y+ Q + +
Sbjct: 58 EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN-SVYIVQEYMETDLANVLEQGP 116
Query: 394 -----ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMD 448
AR + Q++ LKY++ V+H DLKP N+ + + +KI DFGL+++MD
Sbjct: 117 LLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANLFINTED-L-VLKIGDFGLARIMD 172
Query: 449 EENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ H L+ T WY P + +P + +D+W+ G IF + L GK F
Sbjct: 173 PHYSHKGH---LSEGLV-TKWYRSPRLLL---SPNNYTKAIDMWAAGCIFAEMLTGKTLF 225
Query: 509 -G---HNQSQATILE------ENTILKATE--------------VQFANK-PTVSNEAKG 543
G Q Q ILE E + P +S EA
Sbjct: 226 AGAHELEQMQ-LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVD 284
Query: 544 FIRSCLAYRKEDRIDVISLARHDYLQP 570
F+ L + DR+ H Y+
Sbjct: 285 FLEQILTFSPMDRLTAEEALSHPYMSI 311
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 122 bits (308), Expect = 7e-31
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 22/224 (9%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
DRY + LG+G + EV+KA D VA K +L + +E A+RE ++ K
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGT----AIREVSLLK 88
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALK 406
L H +++L V + + EY + +DL Y+ ++ ++ R +S + Q+++ +
Sbjct: 89 ELQHRNIIELKSVI-HHNHRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVN 146
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVC--GEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
+ + + +H DLKP N+LL+ + +KI DFGL++ P +
Sbjct: 147 FCHSRR--CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG----IPIRQF---THE 197
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PPE + + S+ VD+WS+ I+ + + K P
Sbjct: 198 IITLWYRPPEILLGSR---HYSTSVDIWSIACIWAE-MLMKTPL 237
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 121 bits (306), Expect = 8e-31
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 25/224 (11%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+ + + +G+G + V+KA + VA K +L+ + E + A+RE ++ K
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPST----AIREISLLK 57
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--IAEREARSIVMQVVSA 404
L+HP +VKL DV N V E+ DL ++ I +S + Q++
Sbjct: 58 ELNHPNIVKLLDVI-HTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
L + + + V+H DLKP N+L+ G IK+ DFGL++ P +
Sbjct: 116 LAFCHSHR--VLHRDLKPQNLLINTE---GAIKLADFGLARAFG----VPVRTY---THE 163
Query: 465 AGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PE + K S+ VD+WS+G IF + + ++
Sbjct: 164 VVTLWYRAPEILLGAK---YYSTAVDIWSLGCIFAE-MVTRRAL 203
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 120 bits (304), Expect = 1e-30
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 24/221 (10%)
Query: 291 LLMLLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
L +G+G F +VH+ + E +A + + + + L+E + D
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF----LQEALTMRQFD 74
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYL 408
HP +VKL V I N ++E C +L +L+ K ++ Q+ +AL YL
Sbjct: 75 HPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 132
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY 468
+ +H D+ N+L++ + K+ DFGLS+ M++ Y L +
Sbjct: 133 ESKR--FVHRDIAARNVLVSSNDCV---KLGDFGLSRYMEDSTYYKASKGKLPIK----- 182
Query: 469 WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
W PE + +S DVW GV ++ L +G KPF
Sbjct: 183 WM-APESINFR----RFTSASDVWMFGVCMWEILMHGVKPF 218
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 120 bits (304), Expect = 2e-30
Identities = 72/299 (24%), Positives = 127/299 (42%), Gaps = 41/299 (13%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
++ + ++ LG G F +V+KA + + A KV + E++ +YI E I
Sbjct: 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIV----EIEIL 70
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSA 404
DHP +VKL + D ++E+C G + L+ + + E + + + Q++ A
Sbjct: 71 ATCDHPYIVKLLGAYYHD-GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA 129
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFG----LSKVMDEENYNPDHGMDL 460
L +L+ + +IH DLK GN+L+T G+I++ DFG K + + +
Sbjct: 130 LNFLHSKR--IIHRDLKAGNVLMTLE---GDIRLADFGVSAKNLKTLQKRD--------- 175
Query: 461 TSQGAGT-YWYLPPECFVVGKNPPKIS---SKVDVWSVGVIFYQCLYGKKP-FGHNQSQA 515
+ GT YW + PE VV K + K D+WS+G+ + + P N +
Sbjct: 176 SF--IGTPYW-MAPE--VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV 230
Query: 516 TILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPK 574
+ I K+ S E + F++ L E R L H ++
Sbjct: 231 LLK----IAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSN 285
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 121 bits (307), Expect = 2e-30
Identities = 70/280 (25%), Positives = 117/280 (41%), Gaps = 29/280 (10%)
Query: 271 IHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDK 330
+ D + + L+D + LM+LGKG F +V + A K+ L KD
Sbjct: 5 VSKFDNNGNRDRMKLTD-FNFLMVLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQD 61
Query: 331 KANYIKHALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI 389
++ + E + P + +L+ F+ + V+EY +G DL ++++Q
Sbjct: 62 DD--VECTMVEKRVLALPGKPPFLTQLHSCFQTM-DRLYFVMEYVNGGDLMYHIQQVGRF 118
Query: 390 AEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE 449
E A ++ L +L +I+ DLK N++L G IKI DFG+ K
Sbjct: 119 KEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSE---GHIKIADFGMCK---- 169
Query: 450 ENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFG 509
EN T GT Y+ PE ++ P S VD W+ GV+ Y+ L G+ PF
Sbjct: 170 ENIWDG---VTTKTFCGTPDYIAPE--IIAYQPYGKS--VDWWAFGVLLYEMLAGQAPFE 222
Query: 510 HNQSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCL 549
+I++ V + ++S EA + +
Sbjct: 223 GEDEDELF---QSIMEH-NVAY--PKSMSKEAVAICKGLM 256
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 119 bits (302), Expect = 2e-30
Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 25/223 (11%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
++Y L +G+G + V+KA + A K +L K+ E + +RE +I K
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKE-DEGIPST----TIREISILK 55
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVMQVVSAL 405
L H +VKLYDV V E+ D DL L + + A+S ++Q+++ +
Sbjct: 56 ELKHSNIVKLYDVIHTK-KRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y ++ + V+H DLKP N+L+ GE+KI DFGL++ P +
Sbjct: 114 AYCHDRR--VLHRDLKPQNLLINRE---GELKIADFGLARAFG----IPVRKY---THEI 161
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY P+ + K K S+ +D+WSVG IF + + P
Sbjct: 162 VTLWYRAPDVLMGSK---KYSTTIDIWSVGCIFAE-MVNGTPL 200
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 120 bits (303), Expect = 2e-30
Identities = 67/243 (27%), Positives = 117/243 (48%), Gaps = 26/243 (10%)
Query: 268 LKRIHNEDQSRFNNHPV-LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDW 326
+ H+ R N + L ++Y L +G+G + V+KA D + R VA K +L+ +
Sbjct: 1 MHHHHHHSSGRENLYFQGLMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAE- 58
Query: 327 KEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH 386
E + A+RE ++ K L HP +V L DV V E+ + DL L ++
Sbjct: 59 DEGIPST----AIREISLLKELHHPNIVSLIDVI-HSERCLTLVFEFME-KDLKKVLDEN 112
Query: 387 KT-IAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
KT + + + + + Q++ + + ++ + ++H DLKP N+L+ G +K+ DFGL++
Sbjct: 113 KTGLQDSQIKIYLYQLLRGVAHCHQHR--ILHRDLKPQNLLINSD---GALKLADFGLAR 167
Query: 446 VMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGK 505
P + T WY P+ + K K S+ VD+WS+G IF + +
Sbjct: 168 AFG----IPVRSY---THEVVTLWYRAPDVLMGSK---KYSTSVDIWSIGCIFAE-MITG 216
Query: 506 KPF 508
KP
Sbjct: 217 KPL 219
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 121 bits (306), Expect = 2e-30
Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 34/263 (12%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI-HKALD 349
+ +LGKG F +V A + A KV L KD ++ + E I A +
Sbjct: 27 FIRVLGKGSFGKVMLARVKETGDLYAVKV--LKKDVILQDDD--VECTMTEKRILSLARN 82
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLN 409
HP + +L+ F+ + V+E+ +G DL F++++ + E AR +++SAL +L+
Sbjct: 83 HPFLTQLFCCFQTP-DRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH 141
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
+ +I+ DLK N+LL G K+ DFG+ K E T+ GT
Sbjct: 142 DKG--IIYRDLKLDNVLLDHE---GHCKLADFGMCK----EGICNG---VTTATFCGTPD 189
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQ--ATILEENTILKA 526
Y+ PE ++ + + VD W++GV+ Y+ L G PF N+ IL +
Sbjct: 190 YIAPE--ILQEMLYGPA--VDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND------ 239
Query: 527 TEVQFANKPTVSNEAKGFIRSCL 549
EV + + +A G ++S +
Sbjct: 240 -EVVY--PTWLHEDATGILKSFM 259
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 120 bits (302), Expect = 2e-30
Identities = 53/235 (22%), Positives = 90/235 (38%), Gaps = 36/235 (15%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKV--HQLNKDWKEDKKANYIKHALREYNIHK-- 346
LL +GKG + EV + + + VA K+ + K W RE ++
Sbjct: 12 LLECVGKGRYGEVWRG-SWQGE-NVAVKIFSSRDEKSWF------------RETELYNTV 57
Query: 347 ALDHPRVVKLYDVFEIDANS---FCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
L H ++ +S + Y + L YL+ T+ IV+ + S
Sbjct: 58 MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIAS 116
Query: 404 ALKYL------NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
L +L + KP + H DLK NIL+ + C I D GL+ + + D G
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQC---CIADLGLAVMHSQSTNQLDVG 173
Query: 458 MDLTSQGAGTYWYLPPECF--VVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGH 510
+ GT Y+ PE + + +VD+W+ G++ ++ G
Sbjct: 174 N---NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 225
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 120 bits (304), Expect = 3e-30
Identities = 69/317 (21%), Positives = 126/317 (39%), Gaps = 51/317 (16%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
++Y L L+G+G + V K + R VA K + D K KK A+RE + K
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKI-----AMREIKLLK 79
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVMQVVSAL 405
L H +V L +V + + V E+ D H + L+ + + + + Q+++ +
Sbjct: 80 QLRHENLVNLLEVCKKK-KRWYLVFEFVD-HTILDDLELFPNGLDYQVVQKYLFQIINGI 137
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
+ + +IH D+KP NIL+++ G +K+ DFG ++ + + A
Sbjct: 138 GFCHSHN--IIHRDIKPENILVSQS---GVVKLCDFGFARTLAAPGEV------YDDEVA 186
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQA---------- 515
T WY PE +VG K VDVW++G + + ++ +P S
Sbjct: 187 -TRWYRAPE-LLVGD--VKYGKAVDVWAIGCLVTE-MFMGEPLFPGDSDIDQLYHIMMCL 241
Query: 516 -TILEEN----------TILKATEVQFANK-----PTVSNEAKGFIRSCLAYRKEDRIDV 559
++ + ++ E++ P +S + CL + R
Sbjct: 242 GNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFC 301
Query: 560 ISLARHDYLQP-PVPKH 575
L HD+ Q +
Sbjct: 302 AELLHHDFFQMDGFAER 318
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 121 bits (306), Expect = 3e-30
Identities = 82/351 (23%), Positives = 133/351 (37%), Gaps = 61/351 (17%)
Query: 183 LKPEPLPGMSSQEYY-------EADEILK------LRQSALKKEDADLQLEMEKLERERN 229
+ PE + Q +Y E E+L +R+S K+ + L + R+
Sbjct: 2 MIPEVQKPLHEQLWYHGAIPRAEVAELLVHSGDFLVRESQGKQ---EYVLSVLWDGLPRH 58
Query: 230 LHIRELKRIHNEDQSRFNNHPVLSDSYLIGYKNLHIRELKRIHNEDQSRFNNHPVLSDRY 289
I+ L ++ + F + P+L D L + L + +H V D++
Sbjct: 59 FIIQSLDNLYRLEGEGFPSIPLLIDHLLSTQQPLTKKSGVVLH---------RAVPKDKW 109
Query: 290 L-------LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREY 342
+ L +G+G F EV + VA K +E + L+E
Sbjct: 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSC------RETLPPDLKAKFLQEA 163
Query: 343 NIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQV 401
I K HP +V+L V V+E G D +L+ + + +V
Sbjct: 164 RILKQYSHPNIVRLIGVC-TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDA 222
Query: 402 VSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLT 461
+ ++YL IH DL N L+TE NV KI+DFG+S+ + Y
Sbjct: 223 AAGMEYLESKC--CIHRDLAARNCLVTEKNVL---KISDFGMSREEADGVYA-------A 270
Query: 462 SQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
S G W PE G + SS+ DVWS G++ ++ G P+
Sbjct: 271 SGGLRQVPVKW-TAPEALNYG----RYSSESDVWSFGILLWETFSLGASPY 316
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 118 bits (299), Expect = 4e-30
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 34/226 (15%)
Query: 291 LLMLLGKGGFSEVHKAF---DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L +LG+G F EV++ E+ VA K KD D K + + E I K
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKT--CKKDCTLDNKEKF----MSEAVIMKN 69
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALK 406
LDHP +VKL + I+ ++E +L YL+++K ++ +Q+ A+
Sbjct: 70 LDHPHIVKLIGI--IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMA 127
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL I +H D+ NIL+ K+ DFGLS+ +++E+Y
Sbjct: 128 YLESIN--CVHRDIAVRNILVASPECV---KLGDFGLSRYIEDEDY--------YKASVT 174
Query: 467 TY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
W PE + ++ DVW V ++ L +GK+PF
Sbjct: 175 RLPIKWM-SPESINFR----RFTTASDVWMFAVCMWEILSFGKQPF 215
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 119 bits (300), Expect = 5e-30
Identities = 53/235 (22%), Positives = 89/235 (37%), Gaps = 36/235 (15%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKV--HQLNKDWKEDKKANYIKHALREYNIHK-- 346
L +GKG F EV + + + VA K+ + + W RE I++
Sbjct: 7 LQESIGKGRFGEVWRG-KWRGE-EVAVKIFSSREERSW------------FREAEIYQTV 52
Query: 347 ALDHPRVVKLYDVFEIDANS---FCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
L H ++ D + V +Y + L YL ++ T+ + + S
Sbjct: 53 MLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTAS 111
Query: 404 ALKYL------NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
L +L + KP + H DLK NIL+ + C I D GL+ D D
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC---CIADLGLAVRHDSATDTIDIA 168
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISS--KVDVWSVGVIFYQCLYGKKPFGH 510
+ GT Y+ PE N S + D++++G++F++ G
Sbjct: 169 P---NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 220
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 120 bits (302), Expect = 5e-30
Identities = 53/235 (22%), Positives = 85/235 (36%), Gaps = 36/235 (15%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKV--HQLNKDWKEDKKANYIKHALREYNIHK-- 346
++ +GKG + EV + + VA KV W RE I++
Sbjct: 41 MVKQIGKGRYGEVWMG-KWRGE-KVAVKVFFTTEEASWF------------RETEIYQTV 86
Query: 347 ALDHPRVVKLYDVFEIDANS---FCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
+ H ++ S + +Y + L YLK T+ + + VS
Sbjct: 87 LMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVS 145
Query: 404 ALKYL------NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
L +L + KP + H DLK NIL+ + C I D GL+ + D
Sbjct: 146 GLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC---CIADLGLAVKFISDTNEVDIP 202
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISS--KVDVWSVGVIFYQCLYGKKPFGH 510
++ GT Y+PPE N S D++S G+I ++ G
Sbjct: 203 P--NTR-VGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGI 254
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 119 bits (301), Expect = 5e-30
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+ Y+ L LG+G ++ V+K VA K +L + +E A+RE ++ K
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRL--EHEEGAPCT----AIREVSLLK 55
Query: 347 ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVMQVVSAL 405
L H +V L+D+ + S V EY D DL YL I + + Q++ L
Sbjct: 56 DLKHANIVTLHDIIHTE-KSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGL 113
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
Y + K V+H DLKP N+L+ E GE+K+ DFGL++ P ++
Sbjct: 114 AYCHRQK--VLHRDLKPQNLLINER---GELKLADFGLARAKS----IPTK--TYDNEVV 162
Query: 466 GTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T WY PP+ + S+++D+W VG IFY+ + +P
Sbjct: 163 -TLWYRPPDILLGST---DYSTQIDMWGVGCIFYE-MATGRPL 200
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 119 bits (299), Expect = 2e-29
Identities = 73/298 (24%), Positives = 117/298 (39%), Gaps = 46/298 (15%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
+ L +G G F V+ A D++ VA K + +K + IK E
Sbjct: 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK----EVRFL 108
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
+ L HP ++ + + ++ V+EYC G D K + E E ++ + L
Sbjct: 109 QKLRHPNTIQYRGCYLREHTAW-LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
YL+ +IH D+K GNILL+E G +K+ DFG + +M N +
Sbjct: 168 AYLHSHN--MIHRDVKAGNILLSEP---GLVKLGDFGSASIMAPAN---------SF--V 211
Query: 466 GT-YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
GT YW + PE + KVDVWS+G+ + K P + +
Sbjct: 212 GTPYW-MAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPLFN-------------M 256
Query: 525 KATEVQF--ANKPT-------VSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVP 573
A + A + S + F+ SCL +DR L +H ++ P
Sbjct: 257 NAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 314
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 118 bits (298), Expect = 2e-29
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 26/230 (11%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+Y L +G+G F EV KA K + VA K + + KE ALRE I +
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPIT----ALREIKILQ 71
Query: 347 ALDHPRVVKLYDV-------FEIDANSFCTVLEYCDGHDLDFYLKQ-HKTIAEREARSIV 398
L H VV L ++ + S V ++C+ HDL L E + ++
Sbjct: 72 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVM 130
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGM 458
+++ L Y++ K ++H D+K N+L+T G +K+ DFGL++
Sbjct: 131 QMLLNGLYYIHRNK--ILHRDMKAANVLITRD---GVLKLADFGLARAFSLA--KNSQPN 183
Query: 459 DLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T++ T WY PPE + + +D+W G I + ++ + P
Sbjct: 184 RYTNRVV-TLWYRPPELLLGER---DYGPPIDLWGAGCIMAE-MWTRSPI 228
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 117 bits (295), Expect = 2e-29
Identities = 73/291 (25%), Positives = 127/291 (43%), Gaps = 34/291 (11%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
+ + +L LG+G + V+KA + + VA K + D +E K E +I
Sbjct: 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIK---------EISIM 78
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSA 404
+ D P VVK Y + + + + V+EYC + D ++KT+ E E +I+ +
Sbjct: 79 QQCDSPHVVKYYGSYFKNTDLW-IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKG 137
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQG 464
L+YL+ ++ IH D+K GNILL G K+ DFG++ + + M +
Sbjct: 138 LEYLHFMR--KIHRDIKAGNILLNTE---GHAKLADFGVAGQLTDT-------MAKRNTV 185
Query: 465 AGT-YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKP-FGHNQSQATILEENT 522
GT +W + PE V+ + + D+WS+G+ + GK P + +A +
Sbjct: 186 IGTPFW-MAPE--VIQEIG--YNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFM---- 236
Query: 523 ILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVP 573
I F S+ F++ CL E R L +H +++
Sbjct: 237 IPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKG 287
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 116 bits (294), Expect = 2e-29
Identities = 72/224 (32%), Positives = 102/224 (45%), Gaps = 35/224 (15%)
Query: 295 LGKGGFSEVHKAF--DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
LG G F V + K+Q VA KV L + ++ +RE I LD+P
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKV--LKQGTEKADTEEM----MREAQIMHQLDNPY 71
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEI 411
+V+L V A + V+E G L +L + I ++ QV +KYL E
Sbjct: 72 IVRLIGV--CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK 129
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTY- 468
+H DL N+LL + KI+DFGLSK + D+ Y T++ AG +
Sbjct: 130 N--FVHRDLAARNVLLVNRHYA---KISDFGLSKALGADDSYY--------TARSAGKWP 176
Query: 469 --WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFG 509
WY PEC K SS+ DVWS GV ++ L YG+KP+
Sbjct: 177 LKWY-APECINFR----KFSSRSDVWSYGVTMWEALSYGQKPYK 215
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 116 bits (292), Expect = 5e-29
Identities = 71/308 (23%), Positives = 113/308 (36%), Gaps = 43/308 (13%)
Query: 281 NHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALR 340
+ D Y L ++G G + V A+ ++ VA K L K + +K
Sbjct: 9 PWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLK---- 62
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDG--------HDLDFYLKQHKTIAER 392
E HP +V Y F + + V++ G H + + + E
Sbjct: 63 EIQAMSQCHHPNIVSYYTSF-VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 121
Query: 393 EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENY 452
+I+ +V+ L+YL++ IH D+K GNILL E G ++I DFG+S +
Sbjct: 122 TIATILREVLEGLEYLHKNG--QIHRDVKAGNILLGED---GSVQIADFGVSAFLATGGD 176
Query: 453 NPDHGMDLTSQGAGT-YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHN 511
+ + T GT W + PE V + K D+WS G+ + G P+
Sbjct: 177 ITRNKVRKTF--VGTPCW-MAPE---VMEQVRGYDFKADIWSFGITAIELATGAAPYHKY 230
Query: 512 ----------QSQATILEENTILKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVIS 561
Q+ LE K ++ + I CL E R
Sbjct: 231 PPMKVLMLTLQNDPPSLETGVQDKEMLKKY------GKSFRKMISLCLQKDPEKRPTAAE 284
Query: 562 LARHDYLQ 569
L RH + Q
Sbjct: 285 LLRHKFFQ 292
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 116 bits (292), Expect = 6e-29
Identities = 50/232 (21%), Positives = 87/232 (37%), Gaps = 26/232 (11%)
Query: 295 LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVV 354
LGKG F + K + + K + E+ + + L+E + + L+HP V+
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKE---LIRFDEETQRTF----LKEVKVMRCLEHPNVL 70
Query: 355 KLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAEREARSIVMQVVSALKYLNEIKP 413
K V D + EY G L +K + + S + S + YL+ +
Sbjct: 71 KFIGVLYKDKR-LNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN- 128
Query: 414 PVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL-------TSQGAG 466
+IH DL N L+ E + DFGL+++M +E P+ L G
Sbjct: 129 -IIHRDLNSHNCLVRENKNV---VVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-GHNQSQATI 517
+++ PE KVDV+S G++ + + +
Sbjct: 185 NPYWMAPEMINGRSY----DEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF 232
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 116 bits (292), Expect = 1e-28
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 48/234 (20%)
Query: 291 LLMLLGKGGFSEVHKAF----DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+ +LG G F V+K K + VA K L + L E +
Sbjct: 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEI----LDEAYVMA 72
Query: 347 ALDHPRVVKLYDVFEIDANSFCT------VLEYCDGHDLDFYLKQHK-TIAEREARSIVM 399
++D+P V +L + C + + L Y+++HK I + + +
Sbjct: 73 SVDNPHVCRLLGI--------CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q+ + YL + + ++H DL N+L+ KITDFGL+K++ E
Sbjct: 125 QIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEK------- 172
Query: 460 LTSQGAGT----YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
G W E + + + DVWS GV ++ + +G KP+
Sbjct: 173 -EYHAEGGKVPIKWM-ALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPY 220
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 119 bits (300), Expect = 2e-28
Identities = 75/327 (22%), Positives = 128/327 (39%), Gaps = 29/327 (8%)
Query: 224 LERERNLHIRELKRIHNEDQSRFNNHPVLSDSYLIGYKNLHIRELKRIHNEDQSRFNNHP 283
L +E + + + G K + I D + +
Sbjct: 279 LSQEEGEYFNVPVPPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRM 338
Query: 284 VLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
L+D + LM+LGKG F +V + A K+ L KD + + ++ + E
Sbjct: 339 KLTD-FNFLMVLGKGSFGKVMLSERKGTDELYAVKI--LKKD--VVIQDDDVECTMVEKR 393
Query: 344 I-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVV 402
+ P + +L+ F+ + V+EY +G DL ++++Q E A ++
Sbjct: 394 VLALPGKPPFLTQLHSCFQ-TMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIA 452
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
L +L +I+ DLK N++L G IKI DFG+ K EN T
Sbjct: 453 IGLFFLQSKG--IIYRDLKLDNVMLDSE---GHIKIADFGMCK----ENIWDG---VTTK 500
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENT 522
GT Y+ PE ++ P S VD W+ GV+ Y+ L G+ PF +
Sbjct: 501 TFCGTPDYIAPE--IIAYQPYGKS--VDWWAFGVLLYEMLAGQAPFEGEDEDELF---QS 553
Query: 523 ILKATEVQFANKPTVSNEAKGFIRSCL 549
I++ V + ++S EA + +
Sbjct: 554 IMEH-NVAY--PKSMSKEAVAICKGLM 577
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 115 bits (290), Expect = 2e-28
Identities = 53/235 (22%), Positives = 89/235 (37%), Gaps = 36/235 (15%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKV--HQLNKDWKEDKKANYIKHALREYNIHK-- 346
L +GKG F EV + + + VA K+ + + W RE I++
Sbjct: 46 LQESIGKGRFGEVWRG-KWRGE-EVAVKIFSSREERSW------------FREAEIYQTV 91
Query: 347 ALDHPRVVKLYDVFEIDANS---FCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
L H ++ D + V +Y + L YL ++ T+ + + S
Sbjct: 92 MLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTAS 150
Query: 404 ALKYL------NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
L +L + KP + H DLK NIL+ + C I D GL+ D D
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC---CIADLGLAVRHDSATDTIDIA 207
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISS--KVDVWSVGVIFYQCLYGKKPFGH 510
+ GT Y+ PE N S + D++++G++F++ G
Sbjct: 208 P---NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 259
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 116 bits (291), Expect = 3e-28
Identities = 52/244 (21%), Positives = 88/244 (36%), Gaps = 25/244 (10%)
Query: 273 NEDQSRFNNHPVLSDRYLLLMLLGKG--GFSEVHKAFDLKEQRYVACKVHQLNKDWKEDK 330
N ++ Y LL ++GKG V+ A YV + L E
Sbjct: 11 NLYFQGMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEM- 69
Query: 331 KANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDG---HDLDFYLKQHK 387
+ E ++ K +HP +V F I N V + DL + H
Sbjct: 70 ----VTFLQGELHVSKLFNHPNIVPYRATF-IADNELWVVTSFMAYGSAKDL---ICTHF 121
Query: 388 T--IAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
+ E I+ V+ AL Y++ + +H +K +IL++ G++ ++ +
Sbjct: 122 MDGMNELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVD---GKVYLSGLRSNL 176
Query: 446 VMDEENYNPDHGMDLTSQGAGT-YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYG 504
M D W L PE V+ +N +K D++SVG+ + G
Sbjct: 177 SMISHGQRQRVVHDFPKYSVKVLPW-LSPE--VLQQNLQGYDAKSDIYSVGITACELANG 233
Query: 505 KKPF 508
PF
Sbjct: 234 HVPF 237
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 114 bits (288), Expect = 3e-28
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 30/229 (13%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
S ++ L LG G ++ V+K + YVA K +L D +E + A+RE ++
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKL--DSEEGTPST----AIREISLM 57
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT------IAEREARSIVM 399
K L H +V+LYDV + N V E+ D +DL Y+ + +
Sbjct: 58 KELKHENIVRLYDVIHTE-NKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQW 115
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q++ L + +E K ++H DLKP N+L+ + G++K+ DFGL++ P +
Sbjct: 116 QLLQGLAFCHENK--ILHRDLKPQNLLINKR---GQLKLGDFGLARAFG----IPVNTF- 165
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
S T WY P+ + + S+ +D+WS G I + + KP
Sbjct: 166 --SSEVVTLWYRAPDVLMGSR---TYSTSIDIWSCGCILAE-MITGKPL 208
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 113 bits (284), Expect = 3e-28
Identities = 59/223 (26%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDH 350
+ +G G F VH + + VA K + + ++ + E + L H
Sbjct: 12 FVQEIGSGQFGLVHLGY-WLNKDKVAIK--TIREGAMSEEDF------IEEAEVMMKLSH 62
Query: 351 PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLN 409
P++V+LY V ++ C V E+ + L YL+ + A + + V + YL
Sbjct: 63 PKLVQLYGVC-LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 121
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY- 468
E VIH DL N L+ E V K++DFG+++ + ++ Y TS +
Sbjct: 122 EAC--VIHRDLAARNCLVGENQVI---KVSDFGMTRFVLDDQY--------TSSTGTKFP 168
Query: 469 --WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
W PE F + SSK DVWS GV+ ++ GK P+
Sbjct: 169 VKWA-SPEVFSFS----RYSSKSDVWSFGVLMWEVFSEGKIPY 206
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 113 bits (284), Expect = 3e-28
Identities = 57/230 (24%), Positives = 88/230 (38%), Gaps = 47/230 (20%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDH 350
LL LG G F V K Q VA K + + + + +E L H
Sbjct: 12 LLKELGSGQFGVVKLGK-WKGQYDVAVK--MIKEGSMSEDEF------FQEAQTMMKLSH 62
Query: 351 PRVVKLYDVFEIDANSFCT-------VLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVV 402
P++VK Y V C+ V EY L YL+ H + + + V
Sbjct: 63 PKLVKFYGV--------CSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVC 114
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
+ +L + IH DL N L+ K++DFG+++ + ++ Y S
Sbjct: 115 EGMAFLESHQ--FIHRDLAARNCLVDRDLCV---KVSDFGMTRYVLDDQY--------VS 161
Query: 463 QGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
+ W PE F K SSK DVW+ G++ ++ GK P+
Sbjct: 162 SVGTKFPVKWS-APEVFHYF----KYSSKSDVWAFGILMWEVFSLGKMPY 206
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 116 bits (292), Expect = 3e-28
Identities = 82/403 (20%), Positives = 130/403 (32%), Gaps = 101/403 (25%)
Query: 280 NNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACK-VHQLNKDWKEDKKANYIKHA 338
Y ++G G F V++A VA K V Q DK+
Sbjct: 47 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKR-----FK 94
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDANSFCT-----VLEYCDGHDL----DFYLKQHKTI 389
RE I + LDH +V+L F VL+Y + Y + +T+
Sbjct: 95 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ETVYRVARHYSRAKQTL 153
Query: 390 AEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE 449
+ + Q+ +L Y++ + H D+KP N+LL +K+ DFG +K +
Sbjct: 154 PVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVR 209
Query: 450 ENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF- 508
N S + +Y PE +S +DVWS G + + L +P
Sbjct: 210 GEPN-------VSYIC-SRYYRAPELIF---GATDYTSSIDVWSAGCVLAE-LLLGQPIF 257
Query: 509 ----GHNQ-----------SQATILEENTILKATEVQFANK----------PTVSNEAKG 543
G +Q ++ I E N TE +F P EA
Sbjct: 258 PGDSGVDQLVEIIKVLGTPTREQIREMNP--NYTEFKFPQIKAHPWTKVFRPRTPPEAIA 315
Query: 544 FIRSCLAYRKEDRIDVISLARHDYLQ---------------PP----------------- 571
L Y R+ + H + P
Sbjct: 316 LCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLAT 375
Query: 572 --VPKHGRQSASSSAPVGHSPASSGQNQNSGGASTQSSAVQQS 612
+P H R A++S P + AS + G + +SA +
Sbjct: 376 ILIPPHARIQAAASTPTNATAASDANTGDRGQTNNAASASASN 418
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 113 bits (286), Expect = 5e-28
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 39/230 (16%)
Query: 291 LLMLLGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALD 349
+ ++G G EV + QR V + L + E ++ ++ L E +I D
Sbjct: 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDF----LSEASIMGQFD 108
Query: 350 HPRVVKLYDVFEIDANSFCT-------VLEYCDGHDLDFYLKQHK-TIAEREARSIVMQV 401
HP +++L V T V EY + LD +L+ H + ++ V
Sbjct: 109 HPNIIRLEGV--------VTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGV 160
Query: 402 VSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLT 461
+ ++YL+++ +H DL N+L+ VC K++DFGLS+V++++ T
Sbjct: 161 GAGMRYLSDLG--YVHRDLAARNVLVDSNLVC---KVSDFGLSRVLEDDPDA-----AYT 210
Query: 462 SQGAG--TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
+ G W PE SS DVWS GV+ ++ L YG++P+
Sbjct: 211 TTGGKIPIRWT-APEAIAFR----TFSSASDVWSFGVVMWEVLAYGERPY 255
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 113 bits (286), Expect = 7e-28
Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 32/242 (13%)
Query: 275 DQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANY 334
D D Y L+ LG+G +SEV +A ++ V K+ + K
Sbjct: 24 DYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK--------- 74
Query: 335 IKHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVL--EYCDGHDLDFYLKQHKTIAE 391
K RE I + L P ++ L D+ D S L E+ + D + T+ +
Sbjct: 75 -KKIKREIKILENLRGGPNIITLADIV-KDPVSRTPALVFEHVNNTDFKQLYQ---TLTD 129
Query: 392 REARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEEN 451
+ R + +++ AL Y + + ++H D+KP N+++ + ++++ D+GL+ E
Sbjct: 130 YDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEH--RKLRLIDWGLA-----EF 180
Query: 452 YNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHN 511
Y+P + + ++ PE V + +D+WS+G + ++ K+PF H
Sbjct: 181 YHPGQEY---NVRVASRYFKGPELLV---DYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 234
Query: 512 QS 513
Sbjct: 235 HD 236
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 117 bits (295), Expect = 9e-28
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 28/223 (12%)
Query: 291 LLMLLGKGGFSEVHKAF---DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L +G+G F +VH+ VA K + + + L+E +
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKT--CKNCTSDSVREKF----LQEALTMRQ 447
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALK 406
DHP +VKL V I N ++E C +L +L+ K ++ Q+ +AL
Sbjct: 448 FDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 505
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL + +H D+ N+L++ + K+ DFGLS+ M++ Y L +
Sbjct: 506 YLESKR--FVHRDIAARNVLVSSNDCV---KLGDFGLSRYMEDSTYYKASKGKLPIK--- 557
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
W PE + +S DVW GV ++ L +G KPF
Sbjct: 558 --WM-APESINFR----RFTSASDVWMFGVCMWEILMHGVKPF 593
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 113 bits (284), Expect = 9e-28
Identities = 66/286 (23%), Positives = 120/286 (41%), Gaps = 32/286 (11%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
+ +G+G V A + R VA K+ L K + + N E I
Sbjct: 44 RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFN-------EVVIM 96
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
+ H VV++Y + + ++E+ G L + + E + ++ V+ AL
Sbjct: 97 RDYQHFNVVEMYKSYLVG-EELWVLMEFLQGGALTDIVS-QVRLNEEQIATVCEAVLQAL 154
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
YL+ VIH D+K +ILLT G +K++DFG + ++ +
Sbjct: 155 AYLHAQG--VIHRDIKSDSILLTLD---GRVKLSDFGFCAQISKD-------VPKRKSLV 202
Query: 466 GT-YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKP-FGHNQSQATILEENTI 523
GT YW + PE V+ ++ +++VD+WS+G++ + + G+ P F + QA +
Sbjct: 203 GTPYW-MAPE--VISRSL--YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR----L 253
Query: 524 LKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+ + N VS + F+ L ++R L H +L
Sbjct: 254 RDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLL 299
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 115 bits (290), Expect = 1e-27
Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 33/223 (14%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA--LREYNIHKAL 348
L + LG+G F EV VA K K + L+E + K L
Sbjct: 188 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTL----------KPGTMSPEAFLQEAQVMKKL 236
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM--QVVSALK 406
H ++V+LY V + V EY L +LK R + + M Q+ S +
Sbjct: 237 RHEKLVQLYAV--VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
Y+ + +H DL+ NIL+ E VC K+ DFGL++++++ Y G +
Sbjct: 295 YVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEYTARQGAKFPIK--- 346
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
W PE + G + + K DVWS G++ + G+ P+
Sbjct: 347 --WT-APEAALYG----RFTIKSDVWSFGILLTELTTKGRVPY 382
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 112 bits (282), Expect = 1e-27
Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 32/286 (11%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
+Y +G+G V+ A D+ + VA + L + K++ N E +
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN-------EILVM 71
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
+ +P +V D + + + V+EY G L + + E + ++ + + AL
Sbjct: 72 RENKNPNIVNYLDSYLVG-DELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQAL 129
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
++L+ + VIH D+K NILL G +K+TDFG + E S
Sbjct: 130 EFLHSNQ--VIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPE-------QSKRSTMV 177
Query: 466 GT-YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKP-FGHNQSQATILEENTI 523
GT YW + PE VV + KVD+WS+G++ + + G+ P N +A L I
Sbjct: 178 GTPYW-MAPE--VVTRKA--YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL----I 228
Query: 524 LKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
+ N +S + F+ CL E R L +H +L+
Sbjct: 229 ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLK 274
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 113 bits (284), Expect = 1e-27
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 50/236 (21%)
Query: 291 LLMLLGKGGFSEVHKAF----DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
++G G F EV+K K++ VA K L + E ++ ++ L E I
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKT--LKAGYTEKQRVDF----LGEAGIMG 101
Query: 347 ALDHPRVVKLYDVFEIDANSFCT-------VLEYCDGHDLDFYLKQHK-TIAEREARSIV 398
H +++L V + + EY + LD +L++ + + ++
Sbjct: 102 QFSHHNIIRLEGV--------ISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGML 153
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGM 458
+ + +KYL + +H DL NIL+ VC K++DFGLS+V++++
Sbjct: 154 RGIAAGMKYLANMN--YVHRDLAARNILVNSNLVC---KVSDFGLSRVLEDDPEA----- 203
Query: 459 DLTSQGAGTYWYLP-----PECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
T+ G +P PE K +S DVWS G++ ++ + YG++P+
Sbjct: 204 TYTTSGG----KIPIRWTAPEAISYR----KFTSASDVWSFGIVMWEVMTYGERPY 251
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 113 bits (285), Expect = 1e-27
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 39/226 (17%)
Query: 295 LGKGGFSEVHKA-FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+G G F EV L ++ ++ + L + E ++ ++ L E +I DHP +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF----LGEASIMGQFDHPNI 108
Query: 354 VKLYDVFEIDANSFCT-------VLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSAL 405
++L V T V EY + LD +L++H + ++ + S +
Sbjct: 109 IRLEGV--------VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
KYL+++ +H DL NIL+ VC K++DFGL +V++++ T++G
Sbjct: 161 KYLSDMG--YVHRDLAARNILINSNLVC---KVSDFGLGRVLEDDPEA-----AYTTRGG 210
Query: 466 G--TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
W PE K +S DVWS G++ ++ + YG++P+
Sbjct: 211 KIPIRWT-SPEAIAYR----KFTSASDVWSYGIVLWEVMSYGERPY 251
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 111 bits (280), Expect = 1e-27
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 27/220 (12%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDH 350
L LG G F V + Q VA K + + + + + E + L H
Sbjct: 28 FLKELGTGQFGVVKYGK-WRGQYDVAIK--MIKEGSMSEDEF------IEEAKVMMNLSH 78
Query: 351 PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLN 409
++V+LY V + EY L YL++ + ++ + V A++YL
Sbjct: 79 EKLVQLYGVC-TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 137
Query: 410 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYW 469
+ +H DL N L+ + V K++DFGLS+ + ++ Y G + W
Sbjct: 138 SKQ--FLHRDLAARNCLVNDQGVV---KVSDFGLSRYVLDDEYTSSVGSKFPVR-----W 187
Query: 470 YLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
PPE + K SSK D+W+ GV+ ++ GK P+
Sbjct: 188 S-PPEVLMYS----KFSSKSDIWAFGVLMWEIYSLGKMPY 222
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 112 bits (282), Expect = 2e-27
Identities = 81/327 (24%), Positives = 129/327 (39%), Gaps = 67/327 (20%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKE-QRYVACKVHQLNKDWKEDKKANYIKH-----ALR 340
+Y + +G+G + +V KA DLK R+VA K ++ + +R
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG----------EEGMPLSTIR 60
Query: 341 EYNIHKAL---DHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKT--IAE 391
E + + L +HP VV+L+DV V E+ D DL YL + +
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPT 119
Query: 392 REARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEEN 451
+ ++ Q++ L +L+ + V+H DLKP NIL+T G+IK+ DFGL+++ +
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSS---GQIKLADFGLARIYSFQ- 173
Query: 452 YNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHN 511
M LTS T WY PE ++ ++ VD+WSVG IF + ++ +KP
Sbjct: 174 ------MALTSVVV-TLWYRAPE-VLLQS---SYATPVDLWSVGCIFAE-MFRRKPLFRG 221
Query: 512 QSQA---------------------TILEENTILKATEVQFANK-PTVSNEAKGFIRSCL 549
S L + + K + CL
Sbjct: 222 SSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCL 281
Query: 550 AYRKEDRIDVISLARHDYLQ-PPVPKH 575
+ RI S H Y Q K
Sbjct: 282 TFNPAKRISAYSALSHPYFQDLERCKE 308
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 116 bits (292), Expect = 2e-27
Identities = 71/224 (31%), Positives = 102/224 (45%), Gaps = 35/224 (15%)
Query: 295 LGKGGFSEVHKAF--DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPR 352
LG G F V + K+Q VA KV K+ + + +RE I LD+P
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKV------LKQGTEKADTEEMMREAQIMHQLDNPY 397
Query: 353 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNEI 411
+V+L V A + V+E G L +L + I ++ QV +KYL E
Sbjct: 398 IVRLIGV--CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK 455
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGAGTY- 468
+H +L N+LL + KI+DFGLSK + D+ Y T++ AG +
Sbjct: 456 N--FVHRNLAARNVLLVNRHYA---KISDFGLSKALGADDSYY--------TARSAGKWP 502
Query: 469 --WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFG 509
WY PEC K SS+ DVWS GV ++ L YG+KP+
Sbjct: 503 LKWY-APECINFR----KFSSRSDVWSYGVTMWEALSYGQKPYK 541
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 112 bits (281), Expect = 2e-27
Identities = 57/226 (25%), Positives = 83/226 (36%), Gaps = 32/226 (14%)
Query: 291 LLMLLGKGGFSEVHKAF--DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKAL 348
+ LG+G F +V + V L D ++ + +E +I + L
Sbjct: 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGW----KQEIDILRTL 90
Query: 349 DHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKY 407
H ++K + A S V+EY L YL +H I + Q+ + Y
Sbjct: 91 YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAY 149
Query: 408 LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQGA 465
L+ IH DL N+LL + KI DFGL+K + E Y +
Sbjct: 150 LHAQH--YIHRDLAARNVLLDNDRLV---KIGDFGLAKAVPEGHEYY--------RVRED 196
Query: 466 GTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKP 507
G WY PEC K DVWS GV Y+ L +
Sbjct: 197 GDSPVFWY-APECLKEY----KFYYASDVWSFGVTLYELLTHCDSS 237
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 114 bits (286), Expect = 4e-27
Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 38/250 (15%)
Query: 273 NEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKA 332
R ++ + DRY + L+G G + V +A+D E+R VA K K + +
Sbjct: 39 TASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIK-----KILRVFEDL 93
Query: 333 NYIKHALREYNIHKALDHPRVVKLYDVFE-IDANSFCT---VLEYCDGHDLDFYLKQHKT 388
K LRE I L+H VVK+ D+ D F VLE D D +
Sbjct: 94 IDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTPVY 152
Query: 389 IAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMD 448
+ E ++++ ++ +KY++ ++H DLKP N L+ N +K+ DFGL++ +D
Sbjct: 153 LTELHIKTLLYNLLVGVKYVHSAG--ILHRDLKPANCLV---NQDCSVKVCDFGLARTVD 207
Query: 449 EENYNPDHGMDLTSQGAG--------------------TYWYLPPECFVVGKNPPKISSK 488
+ T WY PE + +
Sbjct: 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL---LQENYTEA 264
Query: 489 VDVWSVGVIF 498
+DVWS+G IF
Sbjct: 265 IDVWSIGCIF 274
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 110 bits (278), Expect = 5e-27
Identities = 57/230 (24%), Positives = 89/230 (38%), Gaps = 36/230 (15%)
Query: 291 LLMLLGKGGFSEVHKA----FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+ LG+G F +V VA K L + + A+ +E I +
Sbjct: 25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVK--SLKPESGGNHIADL----KKEIEILR 78
Query: 347 ALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSA 404
L H +VK + E N ++E+ L YL ++K I ++ +Q+
Sbjct: 79 NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKG 138
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTS 462
+ YL + +H DL N+L+ + KI DFGL+K + D+E Y T
Sbjct: 139 MDYLGSRQ--YVHRDLAARNVLVESEHQV---KIGDFGLTKAIETDKEYY--------TV 185
Query: 463 QGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
+ WY PEC + K DVWS GV ++ L Y
Sbjct: 186 KDDRDSPVFWY-APECLMQS----KFYIASDVWSFGVTLHELLTYCDSDS 230
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 109 bits (276), Expect = 5e-27
Identities = 59/227 (25%), Positives = 94/227 (41%), Gaps = 41/227 (18%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDH 350
L+ LG G F EV + VA K + + L E N+ K L H
Sbjct: 17 LVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDA--------FLAEANLMKQLQH 67
Query: 351 PRVVKLYDVFEIDANSFCT------VLEYCDGHDLDFYLKQHKTIAEREARSIVM--QVV 402
R+V+LY V T + EY + L +LK I + + M Q+
Sbjct: 68 QRLVRLYAV--------VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTS 462
+ ++ E IH DL+ NIL+++ C KI DFGL++++++ Y G
Sbjct: 120 EGMAFIEERN--YIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEYTAREGAKFPI 174
Query: 463 QGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
+ W PE G + K DVWS G++ + + +G+ P+
Sbjct: 175 K-----WT-APEAINYG----TFTIKSDVWSFGILLTEIVTHGRIPY 211
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 111 bits (280), Expect = 5e-27
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 31/235 (13%)
Query: 279 FNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA 338
L Y+ +G G + V A D + VA K K + + + K A
Sbjct: 16 NKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIK-----KLSRPFQSEIFAKRA 70
Query: 339 LREYNIHKALDHPRVVKLYDVF--EIDANSFCT---VLEYCDGHDLDFYLKQHKTIAERE 393
RE + K + H V+ L DVF +F V+ + DL + +E +
Sbjct: 71 YRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGLK--FSEEK 127
Query: 394 ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
+ +V Q++ LKY++ V+H DLKPGN+ + E C E+KI DFGL++ D
Sbjct: 128 IQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNED--C-ELKILDFGLARHADA---- 178
Query: 454 PDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
++T T WY PE + + + VD+WSVG I + L GK F
Sbjct: 179 -----EMTGYVV-TRWYRAPEVIL---SWMHYNQTVDIWSVGCIMAEMLTGKTLF 224
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 113 bits (284), Expect = 6e-27
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA--LREYNIHKAL 348
L LG G F EV A + VA K K + L E N+ K L
Sbjct: 192 LEKKLGAGQFGEVWMA-TYNKHTKVAVKTM----------KPGSMSVEAFLAEANVMKTL 240
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM--QVVSALK 406
H ++VKL+ V + + E+ L +LK + + + I Q+ +
Sbjct: 241 QHDKLVKLHAV--VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 298
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
++ + IH DL+ NIL++ VC KI DFGL++V+++ Y G +
Sbjct: 299 FIEQRN--YIHRDLRAANILVSASLVC---KIADFGLARVIEDNEYTAREGAKFPIK--- 350
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
W PE G + K DVWS G++ + + YG+ P+
Sbjct: 351 --WT-APEAINFG----SFTIKSDVWSFGILLMEIVTYGRIPY 386
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 112 bits (283), Expect = 6e-27
Identities = 63/269 (23%), Positives = 112/269 (41%), Gaps = 37/269 (13%)
Query: 269 KRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKE 328
+ ++ + + + D Y++ L+G+G + V+ A+D ++ VA K K +
Sbjct: 12 ENLYFQGIKNVH----VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIK-----KVNRM 62
Query: 329 DKKANYIKHALREYNIHKALDHPRVVKLYDVFE-IDANSFCT---VLEYCDGHDLDFYLK 384
+ K LRE I L +++LYD+ D F VLE D DL K
Sbjct: 63 FEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFK 121
Query: 385 QHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLS 444
+ E ++I+ ++ +++E +IH DLKP N LL + C +K+ DFGL+
Sbjct: 122 TPIFLTEEHIKTILYNLLLGENFIHESG--IIHRDLKPANCLLNQD--C-SVKVCDFGLA 176
Query: 445 KVMDEENYNPDHGMDLTSQGAG---------------TYWYLPPECFVVGKNPPKISSKV 489
+ ++ E ++ G T WY PE + + +
Sbjct: 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL---LQENYTKSI 233
Query: 490 DVWSVGVIFYQCLYGKKPFGHNQSQATIL 518
D+WS G IF + L + ++ + L
Sbjct: 234 DIWSTGCIFAELLNMLQSHINDPTNRFPL 262
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 110 bits (278), Expect = 6e-27
Identities = 73/306 (23%), Positives = 122/306 (39%), Gaps = 59/306 (19%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
+ + L+ L+G G + +V+K +K + A KV + D +E+ IK +E N+
Sbjct: 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEE-----IK---QEINML 74
Query: 346 KAL-DHPRVVKLYDVFEIDANSFCT-----VLEYCDG---HDLDFYLKQHKTIAEREARS 396
K H + Y F V+E+C DL + T+ E
Sbjct: 75 KKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL-IKNTKGNTLKEEWIAY 133
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
I +++ L +L++ K VIH D+K N+LLTE E+K+ DFG+S +D
Sbjct: 134 ICREILRGLSHLHQHK--VIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDRT------ 182
Query: 457 GMDLTSQGAGT-YWYLPPECFVVGKNPPKIS---SKVDVWSVGVIFYQCLYGKKPFGHNQ 512
+ + GT YW + PE V+ + + K D+WS+G+ + G P
Sbjct: 183 -VGRRNTFIGTPYW-MAPE--VIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD-- 236
Query: 513 SQATILEENTILKATEVQF----ANKPTV-----SNEAKGFIRSCLAYRKEDRIDVISLA 563
+ F P + S + + FI SCL R L
Sbjct: 237 -----------MHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLM 285
Query: 564 RHDYLQ 569
+H +++
Sbjct: 286 KHPFIR 291
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 109 bits (275), Expect = 7e-27
Identities = 38/310 (12%), Positives = 79/310 (25%), Gaps = 51/310 (16%)
Query: 282 HPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
+ + RY LL+ G + +A D R VA ++ + ++ L
Sbjct: 26 ARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTF--VDPQGVLP--DDVLQETLSR 81
Query: 342 YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQV 401
+D P V ++ DV A V E+ G L + A + +
Sbjct: 82 TLRLSRIDKPGVARVLDVVHTRAGGLV-VAEWIRGGSLQEVADTS--PSPVGAIRAMQSL 138
Query: 402 VSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLT 461
+A + V P + ++ G++ +
Sbjct: 139 AAAADAAHRA--GVALSIDHPSRVRVSID---GDVVLAYPA------------------- 174
Query: 462 SQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEEN 521
+P + + D+ +G Y L + P ++ +
Sbjct: 175 --------TMPDA-----------NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE 215
Query: 522 TILKATEVQ-FANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQPPVPKHGRQSA 580
++ + + + R L +
Sbjct: 216 RDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIRSASTLLNLMQQATAVADRTEVLGP 275
Query: 581 SSSAPVGHSP 590
APV +P
Sbjct: 276 IDEAPVSAAP 285
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 110 bits (276), Expect = 7e-27
Identities = 71/286 (24%), Positives = 122/286 (42%), Gaps = 33/286 (11%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
+ + L +GKG F EV K D + Q+ VA K+ L + ED+ + + E +
Sbjct: 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQ----EITVL 74
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
D P V K Y + + ++EY G L+ + E + +I+ +++ L
Sbjct: 75 SQCDSPYVTKYYGSY-LKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGL 132
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGA 465
YL+ K IH D+K N+LL+E GE+K+ DFG++ + + +
Sbjct: 133 DYLHSEK--KIHRDIKAANVLLSEH---GEVKLADFGVAGQLTDT-------QIKRNTFV 180
Query: 466 GT-YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGH-NQSQATILEENTI 523
GT +W + PE V+ ++ SK D+WS+G+ + G+ P + + L I
Sbjct: 181 GTPFW-MAPE--VIKQSA--YDSKADIWSLGITAIELARGEPPHSELHPMKVLFL----I 231
Query: 524 LKATEVQFANKPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
K S K F+ +CL R L +H ++
Sbjct: 232 PKNNPPTLEGN--YSKPLKEFVEACLNKEPSFRPTAKELLKHKFIL 275
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 109 bits (274), Expect = 1e-26
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 47/231 (20%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDH 350
+ LG G + EV++ K VA K L +D E ++ L+E + K + H
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEF------LKEAAVMKEIKH 68
Query: 351 PRVVKLYDVFEIDANSFCT-------VLEYCDGHDLDFYLKQH--KTIAEREARSIVMQV 401
P +V+L V CT + E+ +L YL++ + ++ + Q+
Sbjct: 69 PNLVQLLGV--------CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 402 VSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLT 461
SA++YL + IH DL N L+ E ++ K+ DFGLS++M + Y T
Sbjct: 121 SSAMEYLEKKN--FIHRDLAARNCLVGENHLV---KVADFGLSRLMTGDTY--------T 167
Query: 462 SQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
+ + W PE K S K DVW+ GV+ ++ YG P+
Sbjct: 168 AHAGAKFPIKW-TAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPY 213
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 111 bits (279), Expect = 1e-26
Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 34/236 (14%)
Query: 287 DRYLLLML-LGKGGFSEVHKA--FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
D + +G+G + V+KA D K+ + A K + + A RE
Sbjct: 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALK---------QIEGTGISMSACREIA 70
Query: 344 IHKALDHPRVVKLYDVFEIDA-NSFCTVLEYCDGHDLDFYLKQHKT---------IAERE 393
+ + L HP V+ L VF A + +Y + HDL +K H+ +
Sbjct: 71 LLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGM 129
Query: 394 ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLT-EGNVCGEIKITDFGLSKVMDEENY 452
+S++ Q++ + YL+ V+H DLKP NIL+ EG G +KI D G +++
Sbjct: 130 VKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADMGFARLF----N 183
Query: 453 NPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+P + T+WY PE + + + +D+W++G IF + L +P
Sbjct: 184 SPLKPLADLDPVVVTFWYRAPELLLGAR---HYTKAIDIWAIGCIFAE-LLTSEPI 235
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 109 bits (275), Expect = 1e-26
Identities = 62/252 (24%), Positives = 96/252 (38%), Gaps = 38/252 (15%)
Query: 291 LLMLLGKGGFSEVHKA----FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+ LGKG F V VA K QL + D++ ++ RE I K
Sbjct: 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVK--QL-QHSGPDQQRDF----QREIQILK 79
Query: 347 ALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSA 404
AL +VK V + S V+EY L +L++H+ + Q+
Sbjct: 80 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 139
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTS 462
++YL + +H DL NIL+ KI DFGL+K++ D++ Y
Sbjct: 140 MEYLGSRR--CVHRDLAARNILVESEAHV---KIADFGLAKLLPLDKDYY--------VV 186
Query: 463 QGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF-GHNQSQATI 517
+ G WY PE S + DVWS GV+ Y+ Y K + +
Sbjct: 187 REPGQSPIFWY-APESLSDN----IFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMM 241
Query: 518 LEENTILKATEV 529
E + + +
Sbjct: 242 GCERDVPALSRL 253
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 109 bits (275), Expect = 2e-26
Identities = 56/240 (23%), Positives = 95/240 (39%), Gaps = 33/240 (13%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK--AL 348
LL L+G+G + V+K L E+ VA KV + +++ E NI++ +
Sbjct: 17 LLELIGRGRYGAVYKG-SLDER-PVAVKV--FSFANRQNFI--------NEKNIYRVPLM 64
Query: 349 DHPRVVKLY----DVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSA 404
+H + + V + V+EY L YL H T + + V
Sbjct: 65 EHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRG 123
Query: 405 LKYL-------NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
L YL + KP + H DL N+L+ C I+DFGLS +
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC---VISDFGLSMRLTGNRLVRPGE 180
Query: 458 MDLTSQG-AGTYWYLPPECF---VVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQS 513
D + GT Y+ PE V ++ +VD++++G+I+++ +S
Sbjct: 181 EDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 108 bits (273), Expect = 2e-26
Identities = 56/228 (24%), Positives = 91/228 (39%), Gaps = 33/228 (14%)
Query: 291 LLMLLGKGGFSEVHKAF---DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
++G+G F V+ + ++ + A K LN+ + + + L E I K
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS--LNRITDIGEVSQF----LTEGIIMKD 82
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALK 406
HP V+ L + S VL Y DL +++ ++ +QV +K
Sbjct: 83 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 142
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
YL K +H DL N +L E K+ DFGL++ M ++ Y S
Sbjct: 143 YLASKK--FVHRDLAARNCMLDEKFTV---KVADFGLARDMYDKEY--------YSVHNK 189
Query: 467 TYWYLP-----PECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
T LP E K ++K DVWS GV+ ++ + G P+
Sbjct: 190 TGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPY 233
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 110 bits (277), Expect = 2e-26
Identities = 65/233 (27%), Positives = 100/233 (42%), Gaps = 34/233 (14%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYI--KHALREY 342
+ RY L +G+G + V A+D + VA K K + + LRE
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK--------KISPFEHQTYCQRTLREI 76
Query: 343 NIHKALDHPRVVKLYDVFEIDA----NSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIV 398
I H ++ + D+ V + + DL LK + ++ +
Sbjct: 77 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT-QHLSNDHICYFL 134
Query: 399 MQVVSALKYL---NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPD 455
Q++ LKY+ N V+H DLKP N+LL C ++KI DFGL++V D ++ D
Sbjct: 135 YQILRGLKYIHSAN-----VLHRDLKPSNLLLNTT--C-DLKICDFGLARVADPDH---D 183
Query: 456 HGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
H LT A T WY PE + N + +D+WSVG I + L + F
Sbjct: 184 HTGFLTEYVA-TRWYRAPEIML---NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 112 bits (282), Expect = 2e-26
Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 45/230 (19%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA--LREYNIHKAL 348
+ LG G + EV++ K VA K K + ++ L+E + K +
Sbjct: 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTMEVEEFLKEAAVMKEI 273
Query: 349 DHPRVVKLYDVFEIDANSFCT-------VLEYCDGHDLDFYLKQH--KTIAEREARSIVM 399
HP +V+L V CT + E+ +L YL++ + ++ +
Sbjct: 274 KHPNLVQLLGV--------CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 325
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q+ SA++YL + IH +L N L+ E ++ K+ DFGLS++M + Y G
Sbjct: 326 QISSAMEYLEKKN--FIHRNLAARNCLVGENHLV---KVADFGLSRLMTGDTYTAHAGAK 380
Query: 460 LTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
+ W PE K S K DVW+ GV+ ++ YG P+
Sbjct: 381 FPIK-----WT-APESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPY 420
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 108 bits (272), Expect = 2e-26
Identities = 57/228 (25%), Positives = 86/228 (37%), Gaps = 34/228 (14%)
Query: 291 LLMLLGKGGFSEVHKAF---DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
LL LG G F V + + VA K L D +A +RE N +
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKC--LKPDVLSQPEAM--DDFIREVNAMHS 77
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALK 406
LDH +++LY V + V E L L++H+ +QV +
Sbjct: 78 LDHRNLIRLYGV--VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 135
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTSQG 464
YL + IH DL N+LL ++ KI DFGL + + ++++Y Q
Sbjct: 136 YLESKR--FIHRDLAARNLLLATRDLV---KIGDFGLMRALPQNDDHY--------VMQE 182
Query: 465 AGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
W PE S D W GV ++ YG++P+
Sbjct: 183 HRKVPFAWC-APESLKTR----TFSHASDTWMFGVTLWEMFTYGQEPW 225
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 109 bits (273), Expect = 2e-26
Identities = 46/235 (19%), Positives = 86/235 (36%), Gaps = 39/235 (16%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKV--HQLNKDWKEDKKANYIKHALREYNIH--K 346
LL + +G F V KA YVA K+ Q + W+ EY ++
Sbjct: 28 LLEVKARGRFGCVWKA--QLLNEYVAVKIFPIQDKQSWQ------------NEYEVYSLP 73
Query: 347 ALDHPRVVKLYDVFEIDANS---FCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
+ H +++ + + + + + L +LK + ++ E I +
Sbjct: 74 GMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-VVSWNELCHIAETMAR 132
Query: 404 ALKYL--------NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPD 455
L YL + KP + H D+K N+LL I DFGL+ +
Sbjct: 133 GLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTA---CIADFGLALKFE-----AG 184
Query: 456 HGMDLTSQGAGTYWYLPPECFVVGKNPPKISS-KVDVWSVGVIFYQCLYGKKPFG 509
T GT Y+ PE N + + ++D++++G++ ++
Sbjct: 185 KSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 110 bits (276), Expect = 2e-26
Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 30/235 (12%)
Query: 279 FNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA 338
++ + RY L +G G V A+D +R VA K K + + + K A
Sbjct: 17 GDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK-----KLSRPFQNQTHAKRA 71
Query: 339 LREYNIHKALDHPRVVKLYDVF--EIDANSFCT---VLEYCDGHDLDFYLKQHKTIAERE 393
RE + K ++H ++ L +VF + F V+E D +L ++
Sbjct: 72 YRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELD--HER 128
Query: 394 ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
++ Q++ +K+L+ +IH DLKP NI++ C +KI DFGL++
Sbjct: 129 MSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD--C-TLKILDFGLARTAGTSFMM 183
Query: 454 PDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ T +Y PE + VD+WSVG I + + G F
Sbjct: 184 TPY--------VVTRYYRAPEVIL----GMGYKENVDIWSVGCIMGEMIKGGVLF 226
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 108 bits (273), Expect = 3e-26
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 48/234 (20%)
Query: 291 LLMLLGKGGFSEVHKAF----DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+ +LG G F V+K K + VA K L + L E +
Sbjct: 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEI----LDEAYVMA 72
Query: 347 ALDHPRVVKLYDVFEIDANSFCT------VLEYCDGHDLDFYLKQHK-TIAEREARSIVM 399
++D+P V +L + C + + L Y+++HK I + + +
Sbjct: 73 SVDNPHVCRLLGI--------CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q+ + YL + + ++H DL N+L+ KITDFGL+K++ E
Sbjct: 125 QIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEK------- 172
Query: 460 LTSQGAGT----YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
G W E + + + DVWS GV ++ + +G KP+
Sbjct: 173 -EYHAEGGKVPIKWM-ALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPY 220
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 107 bits (270), Expect = 4e-26
Identities = 66/240 (27%), Positives = 95/240 (39%), Gaps = 37/240 (15%)
Query: 291 LLMLLGKGGFSEVHKA----FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
L LGKG F V VA K +L + E+ ++ RE I K
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KL-QHSTEEHLRDF----EREIEILK 66
Query: 347 ALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSA 404
+L H +VK V + + ++EY L YL++HK I + Q+
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTS 462
++YL + IH DL NIL+ N KI DFGL+KV+ D+E +
Sbjct: 127 MEYLGTKR--YIHRDLATRNILVENENRV---KIGDFGLTKVLPQDKEFF--------KV 173
Query: 463 QGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATIL 518
+ G WY PE K S DVWS GV+ Y+ Y +K ++
Sbjct: 174 KEPGESPIFWY-APESLTES----KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 228
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 111 bits (279), Expect = 5e-26
Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 33/223 (14%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA--LREYNIHKAL 348
L + LG+G F EV VA K K + L+E + K L
Sbjct: 271 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTL----------KPGTMSPEAFLQEAQVMKKL 319
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVM--QVVSALK 406
H ++V+LY V + V EY L +LK R + + M Q+ S +
Sbjct: 320 RHEKLVQLYAV--VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 377
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
Y+ + +H DL+ NIL+ E VC K+ DFGL++++++ Y G +
Sbjct: 378 YVERMN--YVHRDLRAANILVGENLVC---KVADFGLARLIEDNEYTARQGAKFPIK--- 429
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
W PE + G + + K DVWS G++ + G+ P+
Sbjct: 430 --WT-APEAALYG----RFTIKSDVWSFGILLTELTTKGRVPY 465
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 108 bits (273), Expect = 5e-26
Identities = 61/244 (25%), Positives = 98/244 (40%), Gaps = 49/244 (20%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKED--KKANYIKHALREY 342
+S + L LLG+G + V A VA K K + K + LRE
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK--------KIEPFDKPLFALRTLREI 60
Query: 343 NIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-------HKTIAERE-- 393
I K H ++ ++++ D+ + + Y+ Q H+ I+ +
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFE----------NFNEVYIIQELMQTDLHRVISTQMLS 110
Query: 394 ---ARSIVMQVVSALKYL---NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM 447
+ + Q + A+K L N VIH DLKP N+L+ C ++K+ DFGL++++
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSN-----VIHRDLKPSNLLINSN--C-DLKVCDFGLARII 162
Query: 448 DEENYNPDHGMDLTSQGAG---TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYG 504
DE + S T WY PE + K S +DVWS G I +
Sbjct: 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVML---TSAKYSRAMDVWSCGCILAELFLR 219
Query: 505 KKPF 508
+ F
Sbjct: 220 RPIF 223
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 107 bits (270), Expect = 5e-26
Identities = 53/224 (23%), Positives = 92/224 (41%), Gaps = 33/224 (14%)
Query: 295 LGKGGFSEVHKAF---DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHP 351
+GKG F V+ + + A K L++ + + + LRE + + L+HP
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKS--LSRITEMQQVEAF----LREGLLMRGLNHP 82
Query: 352 RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALKYLNE 410
V+ L + +L Y DL +++ + ++ S +QV ++YL E
Sbjct: 83 NVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE 142
Query: 411 IKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWY 470
K +H DL N +L E K+ DFGL++ + + Y S +
Sbjct: 143 QK--FVHRDLAARNCMLDESFTV---KVADFGLARDILDREY--------YSVQQHRHAR 189
Query: 471 LP-----PECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
LP E + ++K DVWS GV+ ++ L G P+
Sbjct: 190 LPVKWTALESLQTY----RFTTKSDVWSFGVLLWELLTRGAPPY 229
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 107 bits (270), Expect = 6e-26
Identities = 67/240 (27%), Positives = 95/240 (39%), Gaps = 37/240 (15%)
Query: 291 LLMLLGKGGFSEVHKA----FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
L LGKG F V VA K +L + E+ ++ RE I K
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KL-QHSTEEHLRDF----EREIEILK 97
Query: 347 ALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSA 404
+L H +VK V + + ++EY L YL++HK I + Q+
Sbjct: 98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 157
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM--DEENYNPDHGMDLTS 462
++YL + IH DL NIL+ N KI DFGL+KV+ D+E Y
Sbjct: 158 MEYLGTKR--YIHRDLATRNILVENENRV---KIGDFGLTKVLPQDKEYY--------KV 204
Query: 463 QGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPFGHNQSQATIL 518
+ G WY PE K S DVWS GV+ Y+ Y +K ++
Sbjct: 205 KEPGESPIFWY-APESLTES----KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 259
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 108 bits (272), Expect = 7e-26
Identities = 68/321 (21%), Positives = 107/321 (33%), Gaps = 53/321 (16%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACK-VHQLNKDWKEDK---KANYIKHALR 340
+ Y + + G + V D E VA K V D + + K LR
Sbjct: 20 MQSPYTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR 78
Query: 341 EYNIHKALDHPRVVKLYDVFEIDANSFCT----VLEYCDGHDLDFYLK-QHKTIAEREAR 395
E + HP ++ L D+F V E DL + Q I+ + +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQ 137
Query: 396 SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPD 455
+ ++ L L+E V+H DL PGNILL + +I I DF L++ +
Sbjct: 138 YFMYHILLGLHVLHEAG--VVHRDLHPGNILLADN--N-DITICDFNLAREDTADANKTH 192
Query: 456 HGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF-G---HN 511
+ WY PE + + VD+WS G + + K F G +N
Sbjct: 193 Y--------VTHRWYRAPELVM---QFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN 241
Query: 512 Q-----------SQATILE----------ENTILKATEVQFANK-PTVSNEAKGFIRSCL 549
Q ++ N++ + PT A I L
Sbjct: 242 QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKML 301
Query: 550 AYRKEDRIDVISLARHDYLQP 570
+ + RI RH Y +
Sbjct: 302 EFNPQRRISTEQALRHPYFES 322
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 107 bits (270), Expect = 7e-26
Identities = 46/233 (19%), Positives = 87/233 (37%), Gaps = 46/233 (19%)
Query: 291 LLMLLGKGGFSEVHKAF----DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
L +LG G F VHK + V KV ++ +
Sbjct: 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKV------IEDKSGRQSFQAVTDHMLAIG 70
Query: 347 ALDHPRVVKLYDVFEIDANSFCT------VLEYCDGHDLDFYLKQHK-TIAEREARSIVM 399
+LDH +V+L + C V +Y L +++QH+ + + + +
Sbjct: 71 SLDHAHIVRLLGL--------CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGV 122
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMD 459
Q+ + YL E ++H +L N+LL + ++ DFG++ ++ ++
Sbjct: 123 QIAKGMYYLEEHG--MVHRNLAARNVLLKSPSQV---QVADFGVADLLPPDDKQ------ 171
Query: 460 LTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
W E G K + + DVWS GV ++ + +G +P+
Sbjct: 172 -LLYSEAKTPIKWM-ALESIHFG----KYTHQSDVWSYGVTVWELMTFGAEPY 218
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 108 bits (272), Expect = 8e-26
Identities = 70/248 (28%), Positives = 110/248 (44%), Gaps = 36/248 (14%)
Query: 272 HNEDQSRFNNHPV------LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKD 325
H++++ F + + +RY L +G G + V AFD K VA K K
Sbjct: 8 HSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK-----KL 62
Query: 326 WKEDKKANYIKHALREYNIHKALDHPRVVKLYDVF--EIDANSFCT---VLEYCDGHDLD 380
+ + + K RE + K + H V+ L DVF F V DL+
Sbjct: 63 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLN 121
Query: 381 FYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITD 440
+K + + + + ++ Q++ LKY++ +IH DLKP N+ + E C E+KI D
Sbjct: 122 NIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNED--C-ELKILD 175
Query: 441 FGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQ 500
FGL++ +E +T A T WY PE + N + VD+WSVG I +
Sbjct: 176 FGLARHTADE---------MTGYVA-TRWYRAPEIML---NWMHYNQTVDIWSVGCIMAE 222
Query: 501 CLYGKKPF 508
L G+ F
Sbjct: 223 LLTGRTLF 230
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 107 bits (269), Expect = 2e-25
Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 30/235 (12%)
Query: 279 FNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA 338
+ Y L +G G + V A D + VA K K ++ + + K A
Sbjct: 17 TKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIK-----KLYRPFQSELFAKRA 71
Query: 339 LREYNIHKALDHPRVVKLYDVF--EIDANSFCT---VLEYCDGHDLDFYLKQHKTIAERE 393
RE + K + H V+ L DVF + + F V+ + DL +K H+ + E
Sbjct: 72 YRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMG-TDLGKLMK-HEKLGEDR 129
Query: 394 ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
+ +V Q++ L+Y++ +IH DLKPGN+ + E C E+KI DFGL++ D E
Sbjct: 130 IQFLVYQMLKGLRYIHAAG--IIHRDLKPGNLAVNED--C-ELKILDFGLARQADSE--- 181
Query: 454 PDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+T T WY PE + N + + VD+WSVG I + + GK F
Sbjct: 182 ------MTGYVV-TRWYRAPEVIL---NWMRYTQTVDIWSVGCIMAEMITGKTLF 226
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 107 bits (269), Expect = 2e-25
Identities = 53/228 (23%), Positives = 92/228 (40%), Gaps = 33/228 (14%)
Query: 291 LLMLLGKGGFSEVHKAF---DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
++G+G F V+ + ++ + A K LN+ + + + L E I K
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS--LNRITDIGEVSQF----LTEGIIMKD 146
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVVSALK 406
HP V+ L + S VL Y DL +++ ++ +QV +K
Sbjct: 147 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 206
Query: 407 YLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
+L K +H DL N +L E K+ DFGL++ M ++ ++ H +
Sbjct: 207 FLASKK--FVHRDLAARNCMLDEKFTV---KVADFGLARDMYDKEFDSVHN---KTGAK- 257
Query: 467 TYWYLP-----PECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
LP E K ++K DVWS GV+ ++ + G P+
Sbjct: 258 ----LPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPY 297
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 108 bits (272), Expect = 2e-25
Identities = 57/235 (24%), Positives = 94/235 (40%), Gaps = 30/235 (12%)
Query: 279 FNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA 338
++ + RY L +G G V A+D R VA K K + + + K A
Sbjct: 54 GDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK-----KLSRPFQNQTHAKRA 108
Query: 339 LREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAERE 393
RE + K ++H ++ L +VF V+E D +L ++
Sbjct: 109 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD--HER 165
Query: 394 ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
++ Q++ +K+L+ +IH DLKP NI++ C +KI DFGL++
Sbjct: 166 MSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD--C-TLKILDFGLARTAGTSFMM 220
Query: 454 PDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
+ T +Y PE + VD+WSVG I + + K F
Sbjct: 221 TPY--------VVTRYYRAPEVIL----GMGYKENVDIWSVGCIMGEMVRHKILF 263
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 106 bits (267), Expect = 7e-25
Identities = 63/247 (25%), Positives = 105/247 (42%), Gaps = 44/247 (17%)
Query: 278 RFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKH 337
H ++ RY +L ++GKG F +V KA+D K ++VA K+ + N+ + +
Sbjct: 88 VQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR-NEK-------RFHRQ 139
Query: 338 ALREYNIHKAL------DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--I 389
A E I + L + V+ + + F N C E +L +K++K
Sbjct: 140 AAEEIRILEHLRKQDKDNTMNVIHMLENF-TFRNHICMTFELL-SMNLYELIKKNKFQGF 197
Query: 390 AEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE 449
+ R ++ L L++ + +IH DLKP NILL + IK+ DFG S +
Sbjct: 198 SLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRS-GIKVIDFGSSCYEHQ 254
Query: 450 ENYNPDHGMDLTSQGAGTY----WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGK 505
Y TY +Y PE ++G + +D+WS+G I + L G
Sbjct: 255 RVY--------------TYIQSRFYRAPE-VILGA---RYGMPIDMWSLGCILAELLTGY 296
Query: 506 KPF-GHN 511
G +
Sbjct: 297 PLLPGED 303
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 103 bits (259), Expect = 9e-25
Identities = 54/237 (22%), Positives = 90/237 (37%), Gaps = 48/237 (20%)
Query: 291 LLMLLGKGGFSEVHKA-------FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
LG+G F+++ K + + V KV L+K + ++ +
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKV--LDKAHRNYSES-----FFEAAS 64
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARSIVMQVV 402
+ L H +V Y V + + V E+ LD YLK++K I + Q+
Sbjct: 65 MMSKLSHKHLVLNYGVC-VCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLA 123
Query: 403 SALKYLNEIKPPVIHYDLKPGNILLTEGNVCGE-----IKITDFGLSKVMDEENYNPDHG 457
+A+ +L E +IH ++ NILL IK++D G+S + ++
Sbjct: 124 AAMHFLEENT--LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI----- 176
Query: 458 MDLTSQGAGTY-----WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKPF 508
W PPEC KN ++ D WS G ++ C G KP
Sbjct: 177 ----------LQERIPWV-PPECIENPKN---LNLATDKWSFGTTLWEICSGGDKPL 219
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 105 bits (264), Expect = 1e-24
Identities = 77/341 (22%), Positives = 119/341 (34%), Gaps = 71/341 (20%)
Query: 267 ELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACK-VHQLNKD 325
K I Y ++G G F V +A ++ VA K V Q D
Sbjct: 21 PNKVIKVLASDGKTGEQR-EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQ---D 75
Query: 326 WKEDKKANYIKHALREYNIHKALDHPRVVKLYDVF-----EIDANSFCTVLEYCDGHDL- 379
K K RE I + + HP VV L F + D VLEY +
Sbjct: 76 -KRFK--------NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP-ETVY 125
Query: 380 ---DFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEI 436
Y K +T+ + + Q++ +L Y++ I + H D+KP N+LL G +
Sbjct: 126 RASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG--ICHRDIKPQNLLLDPP--SGVL 181
Query: 437 KITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPE-CFVVGKNPPKISSKVDVWSVG 495
K+ DFG +K++ N S + +Y PE F ++ +D+WS G
Sbjct: 182 KLIDFGSAKILIAGEPN-------VSYIC-SRYYRAPELIF----GATNYTTNIDIWSTG 229
Query: 496 VIFYQCLYGKKPF-----GHNQ-----------SQATILEENTILKATEVQFAN------ 533
+ + L +P G +Q S+ I N E +F
Sbjct: 230 CVMAE-LMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP--NYMEHKFPQIRPHPF 286
Query: 534 ----KPTVSNEAKGFIRSCLAYRKEDRIDVISLARHDYLQP 570
+P +A I L Y R+ I H +
Sbjct: 287 SKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE 327
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 105 bits (263), Expect = 1e-24
Identities = 62/261 (23%), Positives = 98/261 (37%), Gaps = 50/261 (19%)
Query: 282 HPV------LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYI 335
HP RY+L+ LG G FS V A D+ +VA K+ + +K Y
Sbjct: 8 HPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV--------YT 59
Query: 336 KHALREYNIHKAL-----------DHPRVVKLYDVFEIDANS---FCTVLEYCDGHDLDF 381
+ A E + + + ++KL D F + V E G +L
Sbjct: 60 EAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLA 118
Query: 382 YLKQ--HKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVC---GEI 436
+K+ H+ I + I Q++ L Y+ + +IH D+KP N+L+ + +I
Sbjct: 119 LIKKYEHRGIPLIYVKQISKQLLLGLDYM-HRRCGIIHTDIKPENVLMEIVDSPENLIQI 177
Query: 437 KITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGV 496
KI D G + DE N T Y PE V+ P D+WS
Sbjct: 178 KIADLGNACWYDEHYTNS----------IQTREYRSPE--VLLGAP--WGCGADIWSTAC 223
Query: 497 IFYQCLYGKKPF-GHNQSQAT 516
+ ++ + G F T
Sbjct: 224 LIFELITGDFLFEPDEGHSYT 244
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 104 bits (262), Expect = 2e-24
Identities = 56/234 (23%), Positives = 92/234 (39%), Gaps = 42/234 (17%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACK-VHQLNKDWKEDKKANYIKHALREYNIH 345
DR+ + + G+G F V + VA K V Q D + RE I
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQ-------DPR-----FRNRELQIM 70
Query: 346 KAL---DHPRVVKLYDVFEIDANS------FCTVLEYCDGHDL----DFYLKQHKTIAER 392
+ L HP +V+L F V+EY L Y ++
Sbjct: 71 QDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP-DTLHRCCRNYYRRQVAPPPI 129
Query: 393 EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENY 452
+ + Q++ ++ L+ V H D+KP N+L+ E + G +K+ DFG +K +
Sbjct: 130 LIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEAD--GTLKLCDFGSAKKLSPSEP 187
Query: 453 NPDHGMDLTSQGAGTYWYLPPE-CFVVGKNPPKISSKVDVWSVGVIFYQCLYGK 505
N + + +Y PE F ++ VD+WSVG IF + + G+
Sbjct: 188 N-------VAYIC-SRYYRAPELIF----GNQHYTTAVDIWSVGCIFAEMMLGE 229
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 102 bits (256), Expect = 2e-24
Identities = 53/243 (21%), Positives = 91/243 (37%), Gaps = 49/243 (20%)
Query: 291 LLMLLGKGGFSEVHKA-----FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
+ LG+ F +V+K ++ + VA K L + + + E +
Sbjct: 13 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKT--LKDKAEGPLREEF----RHEAMLR 66
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR---------- 395
L HP VV L V + YC DL +L ++ +
Sbjct: 67 ARLQHPNVVCLLGVV-TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSAL 125
Query: 396 ------SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE 449
+V Q+ + ++YL+ V+H DL N+L+ + KI+D GL + +
Sbjct: 126 EPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNV---KISDLGLFREVYA 180
Query: 450 ENYNPDHGMDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGK 505
+Y G W + PE + G K S D+WS GV+ ++ YG
Sbjct: 181 ADY-------YKLLGNSLLPIRW-MAPEAIMYG----KFSIDSDIWSYGVVLWEVFSYGL 228
Query: 506 KPF 508
+P+
Sbjct: 229 QPY 231
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 103 bits (259), Expect = 4e-24
Identities = 68/250 (27%), Positives = 102/250 (40%), Gaps = 42/250 (16%)
Query: 278 RFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKH 337
N DRY + L+GKG F +V KA+D EQ +VA K+ + NK ++
Sbjct: 45 IVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-NKK-------AFLNQ 96
Query: 338 ALREYNIHKAL------DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT--I 389
A E + + + +V L F N C V E ++L L+ +
Sbjct: 97 AQIEVRLLELMNKHDTEMKYYIVHLKRHFMF-RNHLCLVFEML-SYNLYDLLRNTNFRGV 154
Query: 390 AEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE 449
+ R Q+ +AL +L + +IH DLKP NILL IKI DFG S + +
Sbjct: 155 SLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRS-AIKIVDFGSSCQLGQ 213
Query: 450 ENYNPDHGMDLTSQGAGTY----WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGK 505
Y Y +Y PE ++G +D+WS+G I + G+
Sbjct: 214 RIY--------------QYIQSRFYRSPE-VLLGM---PYDLAIDMWSLGCILVEMHTGE 255
Query: 506 KPF-GHNQSQ 514
F G N+
Sbjct: 256 PLFSGANEVD 265
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 103 bits (259), Expect = 4e-24
Identities = 66/353 (18%), Positives = 124/353 (35%), Gaps = 93/353 (26%)
Query: 283 PVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREY 342
S +Y L LG G F V + FD++ + A K K ++ + N RE
Sbjct: 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALK-----KVLQDPRYKN------REL 51
Query: 343 NIHKALDHPRVVKLYDVFEIDANSFCT--------------------------------- 369
+I K LDH ++KL D F +
Sbjct: 52 DIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNK 111
Query: 370 ----VLEY--CDGHD-LDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKP 422
++EY H L +++ ++I + Q+ A+ +++ + + H D+KP
Sbjct: 112 YLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG--ICHRDIKP 169
Query: 423 GNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNP 482
N+L+ +K+ DFG +K + + + + +Y PE +
Sbjct: 170 QNLLVNSK--DNTLKLCDFGSAKKLIPSEPS-------VAYIC-SRFYRAPELML---GA 216
Query: 483 PKISSKVDVWSVGVIFYQCLYGKKPF----GHNQ-----------SQATILEENTILKAT 527
+ + +D+WS+G +F + + GK F +Q ++ ++ N T
Sbjct: 217 TEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNP--HYT 274
Query: 528 EVQFANKPTVS----------NEAKGFIRSCLAYRKEDRIDVISLARHDYLQP 570
EV+F + A + L Y + RI+ H +
Sbjct: 275 EVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH 327
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 102 bits (256), Expect = 5e-24
Identities = 54/238 (22%), Positives = 82/238 (34%), Gaps = 44/238 (18%)
Query: 291 LLMLLGKGGFSEVHKAF---DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L +LGKG F V +A + VA K+ L D I+ LRE K
Sbjct: 27 LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKM--LKADIIASSD---IEEFLREAACMKE 81
Query: 348 LDHPRVVKLYDV-----FEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARS------ 396
DHP V KL V + +L + DL +L +
Sbjct: 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR 141
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
++ + ++YL+ IH DL N +L E + DFGLS+ + +Y
Sbjct: 142 FMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMTV---CVADFGLSRKIYSGDYYRQG 196
Query: 457 GMDLTSQGAGTYWYLP-----PECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
LP E + DVW+ GV ++ + G+ P+
Sbjct: 197 CASK----------LPVKWLALESLADN----LYTVHSDVWAFGVTMWEIMTRGQTPY 240
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 103 bits (258), Expect = 6e-24
Identities = 61/248 (24%), Positives = 97/248 (39%), Gaps = 48/248 (19%)
Query: 285 LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI 344
+ +Y L+ LGKG + V K+ D + VA K K + + + + RE I
Sbjct: 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVK-----KIFDAFQNSTDAQRTFREIMI 61
Query: 345 HKAL-DHPRVVKLYDVFEIDA-NSFCTVLEYCDGHDLDFYLKQHKTIA-----EREARSI 397
L H +V L +V D V +Y + DL H I + +
Sbjct: 62 LTELSGHENIVNLLNVLRADNDRDVYLVFDYME-TDL------HAVIRANILEPVHKQYV 114
Query: 398 VMQVVSALKYL---NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNP 454
V Q++ +KYL ++H D+KP NILL C +K+ DFGLS+
Sbjct: 115 VYQLIKVIKYLHSGG-----LLHRDMKPSNILLNAE--C-HVKVADFGLSRSFVNIRRVT 166
Query: 455 DHGMDLTSQGAG--------------TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQ 500
++ ++ T WY PE + K + +D+WS+G I +
Sbjct: 167 NNIPLSINENTENFDDDQPILTDYVATRWYRAPEILL---GSTKYTKGIDMWSLGCILGE 223
Query: 501 CLYGKKPF 508
+ KP
Sbjct: 224 -ILCGKPI 230
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 100 bits (252), Expect = 7e-24
Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 41/225 (18%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA-LREYNIHKALD 349
LL +GKG F +V D + + VA K K + A L E ++ L
Sbjct: 25 LLQTIGKGEFGDVMLG-DYRGNK-VAVKCI----------KNDATAQAFLAEASVMTQLR 72
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH--KTIAEREARSIVMQVVSALKY 407
H +V+L V + V EY L YL+ + + V A++Y
Sbjct: 73 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 132
Query: 408 LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGT 467
L +H DL N+L++E NV K++DFGL+K E + G
Sbjct: 133 LEGNN--FVHRDLAARNVLVSEDNVA---KVSDFGLTK----EASSTQDT--------GK 175
Query: 468 Y---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
W PE K S+K DVWS G++ ++ +G+ P+
Sbjct: 176 LPVKWT-APEALREK----KFSTKSDVWSFGILLWEIYSFGRVPY 215
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 101 bits (254), Expect = 8e-24
Identities = 50/237 (21%), Positives = 83/237 (35%), Gaps = 43/237 (18%)
Query: 291 LLMLLGKGGFSEVHKAF---DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L +LG+G F V + + VA K + D ++ I+ L E K
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVK--TMKLDNSSQRE---IEEFLSEAACMKD 92
Query: 348 LDHPRVVKLYDV----FEIDANSFCTVLEYCDGHDLDFYLKQHK------TIAEREARSI 397
HP V++L V +L + DL YL + I +
Sbjct: 93 FSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKF 152
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
++ + ++YL+ +H DL N +L + + DFGLSK + +Y
Sbjct: 153 MVDIALGMEYLSNRN--FLHRDLAARNCMLRDDMTV---CVADFGLSKKIYSGDYYRQGR 207
Query: 458 MDLTSQGAGTYWYLP-----PECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
+ +P E +SK DVW+ GV ++ G P+
Sbjct: 208 IAK----------MPVKWIAIESLADR----VYTSKSDVWAFGVTMWEIATRGMTPY 250
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 100 bits (252), Expect = 1e-23
Identities = 49/237 (20%), Positives = 90/237 (37%), Gaps = 43/237 (18%)
Query: 291 LLMLLGKGGFSEVHKAF---DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
+ LG+G F V++ +K++ + +N+ ++ + L E ++ K
Sbjct: 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF----LNEASVMKE 84
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR----------SI 397
+ VV+L V ++E DL YL+ + +
Sbjct: 85 FNCHHVVRLLGVV-SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQM 143
Query: 398 VMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHG 457
++ + YLN K +H DL N ++ E KI DFG+++ + E +Y G
Sbjct: 144 AGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTV---KIGDFGMTRDIYETDYYRKGG 198
Query: 458 MDLTSQGAGTYWYLP-----PECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
L LP PE G ++ DVWS GV+ ++ ++P+
Sbjct: 199 KGL----------LPVRWMSPESLKDG----VFTTYSDVWSFGVVLWEIATLAEQPY 241
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 103 bits (258), Expect = 1e-23
Identities = 59/222 (26%), Positives = 91/222 (40%), Gaps = 35/222 (15%)
Query: 291 LLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHA-LREYNIHKALD 349
LL +GKG F +V D + + VA K K + A L E ++ L
Sbjct: 197 LLQTIGKGEFGDVMLG-DYRGNK-VAVKCI----------KNDATAQAFLAEASVMTQLR 244
Query: 350 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH--KTIAEREARSIVMQVVSALKY 407
H +V+L V + V EY L YL+ + + V A++Y
Sbjct: 245 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 304
Query: 408 LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGT 467
L +H DL N+L++E NV K++DFGL+K E + L +
Sbjct: 305 LEGNN--FVHRDLAARNVLVSEDNVA---KVSDFGLTK----EASSTQDTGKLPVK---- 351
Query: 468 YWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
W PE K S+K DVWS G++ ++ +G+ P+
Sbjct: 352 -WT-APEALREK----KFSTKSDVWSFGILLWEIYSFGRVPY 387
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 100 bits (252), Expect = 2e-23
Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 49/242 (20%)
Query: 291 LLMLLGKGGFSEVHKA-----FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
L LG+G F +V A +++ VA K L K+ E + ++ RE +
Sbjct: 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVK--AL-KEASESARQDF----QREAELL 97
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR---------- 395
L H +V+ + V + V EY DL+ +L+ H A+ A
Sbjct: 98 TMLQHQHIVRFFGVC-TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 156
Query: 396 -----SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEE 450
++ QV + + YL + +H DL N L+ +G V KI DFG+S+ +
Sbjct: 157 LGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVV---KIGDFGMSRDIYST 211
Query: 451 NYNPDHGMDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKK 506
+Y G W +PPE + K +++ DVWS GV+ ++ YGK+
Sbjct: 212 DY-------YRVGGRTMLPIRW-MPPESILYR----KFTTESDVWSFGVVLWEIFTYGKQ 259
Query: 507 PF 508
P+
Sbjct: 260 PW 261
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 98.8 bits (247), Expect = 4e-23
Identities = 65/243 (26%), Positives = 96/243 (39%), Gaps = 50/243 (20%)
Query: 291 LLMLLGKGGFSEVHKA-----FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
L LG+G F +V A K++ VA K L KD + ++ RE +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVK--AL-KDPTLAARKDF----QREAELL 71
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR---------- 395
L H +VK Y V D + V EY DL+ +L+ H A
Sbjct: 72 TNLQHEHIVKFYGVC-GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130
Query: 396 ------SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDE 449
I Q+ S + YL +H DL N L+ + KI DFG+S+ +
Sbjct: 131 GLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGANLLV---KIGDFGMSRDVYS 185
Query: 450 ENYNPDHGMDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGK 505
+Y G W +PPE + K +++ DVWS GVI ++ YGK
Sbjct: 186 TDYY-------RVGGHTMLPIRW-MPPESIMYR----KFTTESDVWSFGVILWEIFTYGK 233
Query: 506 KPF 508
+P+
Sbjct: 234 QPW 236
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 97.0 bits (242), Expect = 4e-22
Identities = 57/239 (23%), Positives = 94/239 (39%), Gaps = 47/239 (19%)
Query: 291 LLMLLGKGGFSEVHKAF-----DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
L+ LG G F EV++ + VA K L + E + ++ L E I
Sbjct: 34 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT--LPEVCSEQDELDF----LMEALII 87
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR-------SIV 398
+H +V+ V + + ++E G DL +L++ + + + +
Sbjct: 88 SKFNHQNIVRCIGVS-LQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 146
Query: 399 MQVVSALKYLNEIKPPVIHYDLKPGNILLT---EGNVCGEIKITDFGLSKVMDEENYNPD 455
+ +YL E IH D+ N LLT G V KI DFG+++ + +Y
Sbjct: 147 RDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVA---KIGDFGMARDIYRASYYRK 201
Query: 456 HGMDLTSQGAGTYWYLP-----PECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
G + LP PE F+ G +SK D WS GV+ ++ G P+
Sbjct: 202 GGCAM----------LPVKWMPPEAFMEG----IFTSKTDTWSFGVLLWEIFSLGYMPY 246
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 97.3 bits (242), Expect = 7e-22
Identities = 62/291 (21%), Positives = 109/291 (37%), Gaps = 88/291 (30%)
Query: 282 HPV-----LSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIK 336
H V + RY ++ LG G FS V ++D++ +++VA KV + + +Y +
Sbjct: 27 HLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE--------HYTE 78
Query: 337 HALREYNIHKAL-----DHP---RVVKLYDVFEIDANS---FCTVLEYCDGHDLDFYLKQ 385
AL E + K++ + P VV+L D F+I + C V E GH L ++ +
Sbjct: 79 TALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIK 137
Query: 386 --HKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNV----------- 432
++ + + I+ QV+ L YL+ K +IH D+KP NILL+
Sbjct: 138 SNYQGLPLPCVKKIIQQVLQGLDYLHT-KCRIIHTDIKPENILLSVNEQYIRRLAAEATE 196
Query: 433 -----------------------------------CGEIKITDFGLSKVMDEENYNPDHG 457
++KI D G + + +
Sbjct: 197 WQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQ- 255
Query: 458 MDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T Y E V+ + ++ D+WS + ++ G F
Sbjct: 256 ---------TRQYRSLE--VLIGSG--YNTPADIWSTACMAFELATGDYLF 293
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 95.9 bits (239), Expect = 1e-21
Identities = 56/237 (23%), Positives = 92/237 (38%), Gaps = 43/237 (18%)
Query: 291 LLMLLGKGGFSEVHKA---FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
L+ LG G F EV++ + + V L + E + ++ L E I
Sbjct: 75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF----LMEALIISK 130
Query: 348 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR-------SIVMQ 400
+H +V+ V + + +LE G DL +L++ + + + +
Sbjct: 131 FNHQNIVRCIGVS-LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 189
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLT---EGNVCGEIKITDFGLSKVMDEENYNPDHG 457
+ +YL E IH D+ N LLT G V KI DFG+++ + Y G
Sbjct: 190 IACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVA---KIGDFGMARDIYRAGYYRKGG 244
Query: 458 MDLTSQGAGTYWYLP-----PECFVVGKNPPKISSKVDVWSVGVIFYQCL-YGKKPF 508
+ LP PE F+ G +SK D WS GV+ ++ G P+
Sbjct: 245 CAM----------LPVKWMPPEAFMEG----IFTSKTDTWSFGVLLWEIFSLGYMPY 287
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 93.9 bits (234), Expect = 5e-21
Identities = 60/253 (23%), Positives = 96/253 (37%), Gaps = 61/253 (24%)
Query: 291 LLMLLGKGGFSEVHKA-----FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIH 345
+ +G+G F V +A + VA K L ++ D +A++ RE +
Sbjct: 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVK--MLKEEASADMQADF----QREAALM 104
Query: 346 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR---------- 395
D+P +VKL V C + EY DL+ +L+
Sbjct: 105 AEFDNPNIVKLLGVC-AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 396 --------------SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDF 441
I QV + + YL+E K +H DL N L+ E V KI DF
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLSERK--FVHRDLATRNCLVGENMVV---KIADF 218
Query: 442 GLSKVMDEENYNPDHGMDLTSQGAGTYWYLP-----PECFVVGKNPPKISSKVDVWSVGV 496
GLS+ + +Y G D +P PE + +++ DVW+ GV
Sbjct: 219 GLSRNIYSADYYKADGNDA----------IPIRWMPPESIFYN----RYTTESDVWAYGV 264
Query: 497 IFYQCL-YGKKPF 508
+ ++ YG +P+
Sbjct: 265 VLWEIFSYGLQPY 277
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 91.9 bits (229), Expect = 1e-20
Identities = 59/250 (23%), Positives = 87/250 (34%), Gaps = 53/250 (21%)
Query: 287 DRYLLLMLLGKGGFSEVHKAF-----DLKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
DR L LG+G F +V +A R VA K L + + + E
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK--MLKEGATHSEHRAL----MSE 80
Query: 342 YNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR----- 395
I + H VV L ++E+C +L YL+ +
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 140
Query: 396 -----------SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLS 444
QV +++L K IH DL NILL+E NV KI DFGL+
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVV---KICDFGLA 195
Query: 445 KVMDEENYNPDHGMDLTSQGAGTYWYLP-----PECFVVGKNPPKISSKVDVWSVGVIFY 499
+ + ++ G LP PE + + DVWS GV+ +
Sbjct: 196 RDIYKDPDYVRKGDAR----------LPLKWMAPETIFDR----VYTIQSDVWSFGVLLW 241
Query: 500 Q-CLYGKKPF 508
+ G P+
Sbjct: 242 EIFSLGASPY 251
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 90.0 bits (224), Expect = 8e-20
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 30/222 (13%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRV 353
+LG+GGF +V+K L + VA K +L KE++ E + H +
Sbjct: 37 ILGRGGFGKVYKGR-LADGTLVAVK--RL----KEERTQGGELQFQTEVEMISMAVHRNL 89
Query: 354 VKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA------RSIVMQVVSALKY 407
++L F + V Y + L + + + I + L Y
Sbjct: 90 LRLRG-FCMTPTERLLVYPYMANGSVASCL--RERPESQPPLDWPKRQRIALGSARGLAY 146
Query: 408 L-NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
L + P +IH D+K NILL E E + DFGL+K+MD ++ H +T+ G
Sbjct: 147 LHDHCDPKIIHRDVKAANILLDEEF---EAVVGDFGLAKLMDYKD---TH---VTTAVRG 197
Query: 467 TYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPF 508
T ++ PE G K S K DV+ GV+ + + G++ F
Sbjct: 198 TIGHIAPEYLSTG----KSSEKTDVFGYGVMLLELITGQRAF 235
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 90.0 bits (224), Expect = 8e-20
Identities = 60/239 (25%), Positives = 89/239 (37%), Gaps = 55/239 (23%)
Query: 287 DRYLLLMLLGKGGFSEVHKA-------FDLKEQRYVACKVHQLNKDWKEDKKANYIKHAL 339
D+ L LG+G F +V A KE VA K L D E ++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK--MLKDDATEKDLSDL----V 88
Query: 340 REYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR--- 395
E + K + H ++ L D ++EY +L YL+ + +
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 396 -------------SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFG 442
S Q+ ++YL K IH DL N+L+TE NV KI DFG
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVM---KIADFG 202
Query: 443 LSKVMDEENYNPDHGMDLTSQGAGTYWYLP-----PECFVVGKNPPKISSKVDVWSVGV 496
L++ ++ +Y T+ G LP PE + + DVWS GV
Sbjct: 203 LARDINNIDY-----YKKTTNGR-----LPVKWMAPEALFDR----VYTHQSDVWSFGV 247
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 90.5 bits (225), Expect = 9e-20
Identities = 59/248 (23%), Positives = 90/248 (36%), Gaps = 56/248 (22%)
Query: 291 LLMLLGKGGFSEVHKA-------FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
L LG+G F +V A KE VA K L D E ++ + E
Sbjct: 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK--MLKDDATEKDLSDL----VSEME 138
Query: 344 IHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR------- 395
+ K + H ++ L D ++EY +L YL+ + +
Sbjct: 139 MMKMIGKHKNIINLLGACTQDG-PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 197
Query: 396 ---------SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKV 446
S Q+ ++YL K IH DL N+L+TE NV KI DFGL++
Sbjct: 198 EQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVM---KIADFGLARD 252
Query: 447 MDEENYNPDHGMDLTSQGAGTYWYLP-----PECFVVGKNPPKISSKVDVWSVGVIFYQ- 500
++ +Y LP PE + + DVWS GV+ ++
Sbjct: 253 INNIDYYKKTTNGR----------LPVKWMAPEALFDR----VYTHQSDVWSFGVLMWEI 298
Query: 501 CLYGKKPF 508
G P+
Sbjct: 299 FTLGGSPY 306
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 89.2 bits (222), Expect = 1e-19
Identities = 62/262 (23%), Positives = 102/262 (38%), Gaps = 71/262 (27%)
Query: 287 DRYLLLMLLGKGGFSEVHKAF---DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYN 343
+L LG+G F +V KA Y V L ++ + + L E+N
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDL----LSEFN 78
Query: 344 IHKALDHPRVVKLYDVFEIDANSFCT-------VLEYCDGHDLDFYLKQHKTIAEREAR- 395
+ K ++HP V+KLY C+ ++EY L +L++ + +
Sbjct: 79 VLKQVNHPHVIKLYGA--------CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 396 -----------------------SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNV 432
S Q+ ++YL E+K ++H DL NIL+ EG
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNILVAEGRK 188
Query: 433 CGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLP-----PECFVVGKNPPKISS 487
KI+DFGLS+ + EE+ SQG +P E ++
Sbjct: 189 M---KISDFGLSRDVYEEDS-----YVKRSQGR-----IPVKWMAIESLFDH----IYTT 231
Query: 488 KVDVWSVGVIFYQCL-YGKKPF 508
+ DVWS GV+ ++ + G P+
Sbjct: 232 QSDVWSFGVLLWEIVTLGGNPY 253
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 89.2 bits (222), Expect = 1e-19
Identities = 59/241 (24%), Positives = 87/241 (36%), Gaps = 63/241 (26%)
Query: 287 DRYLLLMLLGKGGFSEVHKA--FDLKEQRY---VACKVHQLNKDWKEDKKANYIKHALRE 341
+ LG G F +V +A F L ++ VA K L D+K + E
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK--MLKSTAHADEKEAL----MSE 99
Query: 342 YNIHKALD-HPRVVKLYDVFEIDANSFCT-------VLEYCDGHDLDFYLKQHKTIAERE 393
I L H +V L CT + EYC DL +L++ + E +
Sbjct: 100 LKIMSHLGQHENIVNLLGA--------CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD 151
Query: 394 AR--------------SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKIT 439
QV + +L IH D+ N+LLT G+V KI
Sbjct: 152 PAFAIANSTASTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVA---KIG 206
Query: 440 DFGLS-KVMDEENYNPDHGMDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVG 495
DFGL+ +M++ NY +G W + PE + + DVWS G
Sbjct: 207 DFGLARDIMNDSNY--------IVKGNARLPVKW-MAPESIFDC----VYTVQSDVWSYG 253
Query: 496 V 496
+
Sbjct: 254 I 254
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 88.5 bits (220), Expect = 2e-19
Identities = 53/254 (20%), Positives = 93/254 (36%), Gaps = 50/254 (19%)
Query: 268 LKRIHNEDQSRFNNHPVLS-----DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQL 322
+K+ H+ + N P + + ++G+G F +V KA K+ + + ++
Sbjct: 1 MKKHHHHHHGKNNPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM 60
Query: 323 NKDWKEDKKANYIKHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDF 381
+ +D ++ E + L HP ++ L E +EY +L
Sbjct: 61 KEYASKDDHRDF----AGELEVLCKLGHHPNIINLLGACEHR-GYLYLAIEYAPHGNLLD 115
Query: 382 YLKQHKTIAEREAR----------------SIVMQVVSALKYLNEIKPPVIHYDLKPGNI 425
+L++ + + A V + YL++ + IH DL NI
Sbjct: 116 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNI 173
Query: 426 LLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY---WYLPPECFVVGKNP 482
L+ E V KI DFGLS+ +E Y + G W + E
Sbjct: 174 LVGENYVA---KIADFGLSR--GQEVY--------VKKTMGRLPVRW-MAIESLNYS--- 216
Query: 483 PKISSKVDVWSVGV 496
++ DVWS GV
Sbjct: 217 -VYTTNSDVWSYGV 229
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 86.5 bits (215), Expect = 9e-19
Identities = 56/250 (22%), Positives = 84/250 (33%), Gaps = 54/250 (21%)
Query: 287 DRYLLLMLLGKGGFSEVHKA-----FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
+R LG G F +V +A VA K L ++ + E
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK--MLKPSAHLTEREAL----MSE 76
Query: 342 YNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR----- 395
+ L +H +V L I + EYC DL +L++ +
Sbjct: 77 LKVLSYLGNHMNIVNLLGACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 135
Query: 396 -------------SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFG 442
S QV + +L IH DL NILLT G + KI DFG
Sbjct: 136 EDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHGRIT---KICDFG 190
Query: 443 LS-KVMDEENYNPDHGMDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIF 498
L+ + ++ NY +G W + PE + + DVWS G+
Sbjct: 191 LARDIKNDSNY--------VVKGNARLPVKW-MAPESIFNC----VYTFESDVWSYGIFL 237
Query: 499 YQ-CLYGKKP 507
++ G P
Sbjct: 238 WELFSLGSSP 247
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 87.0 bits (216), Expect = 1e-18
Identities = 65/302 (21%), Positives = 93/302 (30%), Gaps = 61/302 (20%)
Query: 231 HIRELKR--IHNEDQSRFNNHPVLSDSYLIGYKNLHIRELKRIHNEDQSRFNNHPVLS-- 286
H I + FN + Y L P
Sbjct: 5 HHHHHHDYDIPTTENLYFNGMGYYHHHHHHDYDIPTTENLYFQGMLAGVSEYELPEDPRW 64
Query: 287 ----DRYLLLMLLGKGGFSEVHKA-------FDLKEQRYVACKVHQLNKDWKEDKKANYI 335
DR +L LG+G F +V A VA K L D E ++
Sbjct: 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK--MLKSDATEKDLSDL- 121
Query: 336 KHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 394
+ E + K + H ++ L D ++EY +L YL+ + +
Sbjct: 122 ---ISEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASKGNLREYLQARRPPGLEYS 177
Query: 395 R----------------SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKI 438
S QV ++YL K IH DL N+L+TE NV KI
Sbjct: 178 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVM---KI 232
Query: 439 TDFGLS-KVMDEENYNPDHGMDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSV 494
DFGL+ + + Y G W + PE + + DVWS
Sbjct: 233 ADFGLARDIHHIDYY--------KKTTNGRLPVKW-MAPEALFDR----IYTHQSDVWSF 279
Query: 495 GV 496
GV
Sbjct: 280 GV 281
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 85.3 bits (212), Expect = 2e-18
Identities = 57/246 (23%), Positives = 95/246 (38%), Gaps = 58/246 (23%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACK---------VHQLNKDWKEDKKANYIKHALREYNI 344
+G+GGF V+K + + VA K +L + + +E +
Sbjct: 38 KMGEGGFGVVYKGY-VNNTT-VAVKKLAAMVDITTEELKQQF------------DQEIKV 83
Query: 345 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT-----------IAERE 393
H +V+L F D + C V Y L L IA+
Sbjct: 84 MAKCQHENLVELLG-FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGA 142
Query: 394 ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYN 453
A + +L+E IH D+K NILL E KI+DFGL++ ++
Sbjct: 143 AN--------GINFLHE--NHHIHRDIKSANILLDEAF---TAKISDFGLARASEKFAQT 189
Query: 454 PDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQS 513
+TS+ GT Y+ PE + G+ I+ K D++S GV+ + + G ++
Sbjct: 190 --V---MTSRIVGTTAYMAPEA-LRGE----ITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 514 QATILE 519
+L+
Sbjct: 240 PQLLLD 245
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 85.5 bits (212), Expect = 4e-18
Identities = 61/391 (15%), Positives = 117/391 (29%), Gaps = 124/391 (31%)
Query: 269 KRIHNEDQSRFNN-------------HPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYV 315
H+ + +L++ +L++ +G G F V + ++Y
Sbjct: 4 HHHHSSGRENLYFQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYY 63
Query: 316 ACKVHQLNKDWKEDKKANYIKHALREYNIHKAL-----DHPRVVKLYDVFEIDANSFCTV 370
A KV + N Y + A E +I K + ++ +VK + F + C +
Sbjct: 64 AVKVVR-NIK-------KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYY-DHMCLI 114
Query: 371 LEYCDGHDLDFYLKQHK--TIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLT 428
E + + ++ + + ++++ AL YL ++ + H DLKP NILL
Sbjct: 115 FEPLGPSLYEI-ITRNNYNGFHIEDIKLYCIEILKALNYLRKMS--LTHTDLKPENILLD 171
Query: 429 EGNVCG----------------------EIKITDFGLSKVMDEENYNPDHGMDLTSQGAG 466
+ IK+ DFG + +
Sbjct: 172 DPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFG-CATFKSDYHG------------- 217
Query: 467 TY----WYLPPECFVV---GKNPPKISSKVDVWSVGVIFYQCLY---------------- 503
+ Y PE V+ G + D+WS G + + LY
Sbjct: 218 SIINTRQYRAPE--VILNLGWDVS-----SDMWSFGCVLAE-LYTGSLLFRTHEHMEHLA 269
Query: 504 ------GKKP---------------FGHNQSQATILEENTILKATEVQFANKPTVS---- 538
P ++ + E + + + + P
Sbjct: 270 MMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH 329
Query: 539 NEAKGFIRSCLAYRKEDRIDVISLARHDYLQ 569
F+ S L R L +H +L+
Sbjct: 330 ELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 83.9 bits (208), Expect = 1e-17
Identities = 73/375 (19%), Positives = 123/375 (32%), Gaps = 101/375 (26%)
Query: 278 RFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKE-QRYVACKVHQLNKDWKEDKKANYIK 336
L +RY ++ LG+G F +V + D + VA K+ + N Y +
Sbjct: 10 VCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIR-NVG-------KYRE 61
Query: 337 HALREYNIHKAL------DHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKT- 388
A E N+ K + + V + D F C E G + +F LK++
Sbjct: 62 AARLEINVLKKIKEKDKENKFLCVLMSDWFNFH-GHMCIAFELL-GKNTFEF-LKENNFQ 118
Query: 389 -IAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG------------- 434
R + Q+ AL++L+E + + H DLKP NIL
Sbjct: 119 PYPLPHVRHMAYQLCHALRFLHENQ--LTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 176
Query: 435 ---EIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY----WYLPPE-CFVVGKNPPKIS 486
I++ DFG S D E++ T Y PPE +G P
Sbjct: 177 KNTSIRVADFG-SATFDHEHHT-------------TIVATRHYRPPEVILELGWAQP--- 219
Query: 487 SKVDVWSVGVIFYQCLYGKKPF-GHNQSQ--ATILE------ENTILKATEVQF-----A 532
DVWS+G I ++ G F H + + + + I + + ++
Sbjct: 220 --CDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGL 277
Query: 533 NKPTVSNEAK------------------------GFIRSCLAYRKEDRIDVISLARHDYL 568
S++ + +R L + RI + H +
Sbjct: 278 VWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337
Query: 569 QPPVPKHGRQSASSS 583
P+ S +
Sbjct: 338 AGLTPEERSFHTSRN 352
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 82.7 bits (205), Expect = 3e-17
Identities = 53/243 (21%), Positives = 80/243 (32%), Gaps = 58/243 (23%)
Query: 287 DRYLLLMLLGKGGFSEVHKA-----FDLKEQRYVACKVHQLNKDWKEDKKANYIKHALRE 341
+ +LG G F +V A VA K L + ++ + E
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVK--MLKEKADSSEREAL----MSE 98
Query: 342 YNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR----- 395
+ L H +V L + + EYC DL YL+ + +
Sbjct: 99 LKMMTQLGSHENIVNLLGACTLS-GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ 157
Query: 396 ------------------SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIK 437
QV +++L +H DL N+L+T G V K
Sbjct: 158 KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CVHRDLAARNVLVTHGKVV---K 212
Query: 438 ITDFGLS-KVMDEENYNPDHGMDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWS 493
I DFGL+ +M + NY +G W + PE G + K DVWS
Sbjct: 213 ICDFGLARDIMSDSNY--------VVRGNARLPVKW-MAPESLFEG----IYTIKSDVWS 259
Query: 494 VGV 496
G+
Sbjct: 260 YGI 262
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 81.2 bits (201), Expect = 8e-17
Identities = 67/266 (25%), Positives = 105/266 (39%), Gaps = 64/266 (24%)
Query: 278 RFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQ-RYVACKVHQLNKDWKEDKKANYIK 336
+ VLS RY ++ LG+G F +V + D K R+VA K+ K + Y +
Sbjct: 5 ICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKI------VKNVDR--YCE 56
Query: 337 HALREYNIHKAL------DHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKT- 388
A E + + L R V++ + FE C V E G DF +K++
Sbjct: 57 AARSEIQVLEHLNTTDPNSTFRCVQMLEWFE-HHGHICIVFELL-GLSTYDF-IKENGFL 113
Query: 389 -IAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCG------------- 434
R + Q+ ++ +L+ K + H DLKP NIL + +
Sbjct: 114 PFRLDHIRKMAYQICKSVNFLHSNK--LTHTDLKPENILFVQSDYTEAYNPKIKRDERTL 171
Query: 435 ---EIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTY----WYLPPE-CFVVGKNPPKIS 486
+IK+ DFG S D+E+++ T Y PE +G + P
Sbjct: 172 INPDIKVVDFG-SATYDDEHHS-------------TLVSTRHYRAPEVILALGWSQP--- 214
Query: 487 SKVDVWSVGVIFYQCLYGKKPF-GHN 511
DVWS+G I + G F H+
Sbjct: 215 --CDVWSIGCILIEYYLGFTVFPTHD 238
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 78.0 bits (193), Expect = 7e-16
Identities = 63/238 (26%), Positives = 98/238 (41%), Gaps = 53/238 (22%)
Query: 294 LLGKGGFSEVHKAFDLKEQRYVACKV-----HQLNKDWKEDKKANYIKHALREYNIHKAL 348
L+G G F +V+K L++ VA K Q +++ E
Sbjct: 46 LIGHGVFGKVYKGV-LRDGAKVALKRRTPESSQGIEEF------------ETEIETLSFC 92
Query: 349 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL------------KQHKTIAEREARS 396
HP +V L F + N + +Y + +L +L +Q I AR
Sbjct: 93 RHPHLVSLIG-FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR- 150
Query: 397 IVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDH 456
L YL+ +IH D+K NILL E V KITDFG+SK E + H
Sbjct: 151 -------GLHYLHT--RAIIHRDVKSINILLDENFVP---KITDFGISKKGTEL--DQTH 196
Query: 457 GMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQ 514
L++ GT Y+ PE F+ G +++ K DV+S GV+ ++ L + + +
Sbjct: 197 ---LSTVVKGTLGYIDPEYFIKG----RLTEKSDVYSFGVVLFEVLCARSAIVQSLPR 247
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 76.1 bits (186), Expect = 4e-15
Identities = 39/239 (16%), Positives = 68/239 (28%), Gaps = 56/239 (23%)
Query: 286 SDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKV-HQLNKDWKEDKKANYIKHALREYNI 344
+++ +G+G F EV + + VA K+ D + L E I
Sbjct: 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76
Query: 345 HKAL---------DHPRVVKLYDVF-----------------------------EIDANS 366
K L + L V +
Sbjct: 77 SKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQ 136
Query: 367 FCTVLEYCD-GHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNI 425
VLE+ G DL+ + + A+SI+ Q+ ++L E H DL GN+
Sbjct: 137 LFIVLEFEFGGIDLEQMRTKLSS--LATAKSILHQLTASLAVA-EASLRFEHRDLHWGNV 193
Query: 426 LLTEGNVCGEIKITDFGLSKVMDEENYN-----PDHGMDLTSQGAGTY---WYLPPECF 476
LL + K+ K + D+ + + + + F
Sbjct: 194 LLKK---TSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLF 249
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 65.5 bits (160), Expect = 7e-12
Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 15/161 (9%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+RY L +G G F +++ D+ VA K E K + E I+K
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK--------LECVKTKH-PQLHIESKIYK 59
Query: 347 ALDH-PRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSA 404
+ + + + + V+E G L D + + + + + Q++S
Sbjct: 60 MMQGGVGIPTIRW-CGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISR 117
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
++Y++ IH D+KP N L+ G + I DFGL+K
Sbjct: 118 IEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 64.9 bits (157), Expect = 5e-11
Identities = 60/339 (17%), Positives = 99/339 (29%), Gaps = 87/339 (25%)
Query: 170 TSTLHNGTDSATFLKPEPLPGMSSQEYYEADEILKLRQSALKKEDADLQLEMEKLERERN 229
T+ TD + + DE+ L L DL E+ N
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT----N 326
Query: 230 -LH---IRELKRIHNEDQSRFNNHPVLSDSYLIGYKNLHIRELKRI---------HNEDQ 276
I E R + + ++N +K+++ +L I E +
Sbjct: 327 PRRLSIIAESIR---DGLATWDN-----------WKHVNCDKLTTIIESSLNVLEPAEYR 372
Query: 277 SRFNNHPVLSD-----RYLLLMLLGKGGFSEV-------HKAFDLKEQR-YVACKVHQLN 323
F+ V LL ++ S+V HK +++Q + +
Sbjct: 373 KMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY 432
Query: 324 KDWKEDKKANYIKHA--LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGH---- 377
+ K + Y H + YNI K D ++ Y D F + + + H
Sbjct: 433 LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYL----D-QYFYSHIGH---HLKNI 484
Query: 378 --------------DLDFYLKQ---HKTIAEREARSIVMQVVSALK-YLNEIKPPVIHYD 419
D F L+Q H + A A ++ + LK Y I Y+
Sbjct: 485 EHPERMTLFRMVFLDFRF-LEQKIRHDSTA-WNASGSILNTLQQLKFYKPYICDNDPKYE 542
Query: 420 LKPGNI---LLTEGNVCGEIKITD---FGLSKVMDEENY 452
I L K TD L M E+
Sbjct: 543 RLVNAILDFLPKIEENLICSKYTDLLRIAL---MAEDEA 578
Score = 60.3 bits (145), Expect = 1e-09
Identities = 30/242 (12%), Positives = 71/242 (29%), Gaps = 60/242 (24%)
Query: 180 ATFLKPEPLPGM------SSQEYYEADEILKL--RQSALKKEDADLQLEMEKLERERNLH 231
+ F +P + + ++ + S ++K+ + + + + E +
Sbjct: 379 SVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVK 438
Query: 232 IRELKRIH-------NEDQSRFNNH--PVLSDSYL---IGYKNLHIRELKRIHNEDQSRF 279
+ +H N ++ ++ P D Y IG+ H++ ++
Sbjct: 439 LENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH---HLKNIEH--------- 486
Query: 280 NNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHAL 339
+R L F V D R++ K+ + W L
Sbjct: 487 ------PERMTL--------FRMVF--LDF---RFLEQKIRHDSTAWNASGSILNTLQQL 527
Query: 340 REYNIHKALDHP---RVVKLYDVFEIDANSFCTVLEYCD------GHDLDFYLKQHKTIA 390
+ Y + + P R+V F +Y D + + ++
Sbjct: 528 KFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQV 587
Query: 391 ER 392
+R
Sbjct: 588 QR 589
Score = 59.5 bits (143), Expect = 3e-09
Identities = 63/405 (15%), Positives = 124/405 (30%), Gaps = 109/405 (26%)
Query: 208 SALKKEDADLQLEMEKLERERNLHIRELKRIHNEDQSRFNNHPVLSDSYLIGYKNLHIRE 267
S +K E + +R+ R++N++Q F + V + +
Sbjct: 96 SPIKTEQRQPSMMTRMYIEQRD-------RLYNDNQ-VFAKYNV--------SRLQPYLK 139
Query: 268 LKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGF------SEVHKAFDLKEQRYVACKVHQ 321
L++ E + + +L+ G G +V K Q + K+
Sbjct: 140 LRQALLELR---------PAKNVLID--GVLGSGKTWVALDV--CLSYKVQCKMDFKIF- 185
Query: 322 LNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDF 381
W + L+ N + + + KL ++ID N + D
Sbjct: 186 ----W--------LN--LKNCNSPETVLEM-LQKLL--YQIDPN-------WTSRSDHSS 221
Query: 382 YLKQHKTIAEREARSIVM--QVVSALKYLNEIKPPVI--HYDL--KPGNILLTEGNVCGE 435
+K + E R ++ + L L ++ ++L K ILLT
Sbjct: 222 NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCK---ILLTTRF---- 274
Query: 436 IKITDFG-------LSKVMDEENYNPDHGMDLTSQGAGT-YWYLPPECFVVGKNPPKIS- 486
++TDF +S PD L + LP E V+ NP ++S
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE--VLTTNPRRLSI 332
Query: 487 ---------------SKVDVWSVGVIFYQCLYGKKPFGHNQ--SQATILEENT-I-LKAT 527
V+ + I L +P + + + ++ + I
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL 392
Query: 528 EVQFANKPT--VSNEAKGFIRSCLAYRKEDRIDVISLARHD-YLQ 569
+ + + V + L ++ IS+ YL+
Sbjct: 393 SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE-STISI--PSIYLE 434
Score = 52.9 bits (126), Expect = 3e-07
Identities = 39/280 (13%), Positives = 83/280 (29%), Gaps = 56/280 (20%)
Query: 304 HKAFDLKEQRYVACK--VHQLNKDWKEDKKANYIKHALREYNIHKALDH-----PRVVKL 356
H F+ E +Y K + + ++ ++ + + +DH V
Sbjct: 6 HMDFETGEHQY-QYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGT 64
Query: 357 YDVFEI----DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIK 412
+F +E + F + KT E+ S++ + Y+ +
Sbjct: 65 LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKT--EQRQPSMMTR-----MYIEQRD 117
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPD---HGMDLTSQGAGTYW 469
L N + + NV L + + E + G+ G+G W
Sbjct: 118 R------LYNDNQVFAKYNVSRLQPYLK--LRQALLELRPAKNVLIDGV----LGSGKTW 165
Query: 470 YLPPE-CF---VVGKNPPKISSKVDVW-SVGVIFYQCLYGKKPFGHNQSQATILEENTIL 524
+ + C V K KI W ++ C + Q ++ N
Sbjct: 166 -VALDVCLSYKVQCKMDFKIF-----WLNLK----NCNSPETVLEMLQKLLYQIDPN--W 213
Query: 525 KATEVQFANKPTVSNEAKGFIRSCLAYRKEDR---I--DV 559
+ +N + + +R L + + + +V
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV 253
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 64.7 bits (157), Expect = 7e-11
Identities = 69/321 (21%), Positives = 100/321 (31%), Gaps = 109/321 (33%)
Query: 152 GVAGTPTGPVTPTAPSTPTSTLHNGTDSATFLKPEPLPGMSSQEYYEADEILKLRQSALK 211
GV P T PS +L N P P M S I L Q +
Sbjct: 307 GVRCYEAYPNTSLPPSILEDSLENNEGV-----PSP---MLS--------ISNLTQEQV- 349
Query: 212 KEDADLQLEMEKLERERNLHIRELKRIHNEDQSRFN--NHPVLS---DSYLIGYKNLHIR 266
+ + N H+ K++ S N + V+S S L G NL +R
Sbjct: 350 ----------QDYVNKTNSHLPAGKQVE---ISLVNGAKNLVVSGPPQS-LYGL-NLTLR 394
Query: 267 ELKRIHNEDQSR--FNN-HPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVH-QL 322
+ K DQSR F+ S+R+L VA H L
Sbjct: 395 KAKAPSGLDQSRIPFSERKLKFSNRFLP-----------------------VASPFHSHL 431
Query: 323 NKDWKEDKKANYIKHALREYNI---HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL 379
+ I L + N+ K + P +YD F DG DL
Sbjct: 432 LVPASDL-----INKDLVKNNVSFNAKDIQIP----VYDTF--------------DGSDL 468
Query: 380 DFYLKQHKTIAEREARSIVMQVV---SALKYLNEIKPPVIHY-DLKPGNI----LLTEGN 431
+I+ER I+ V + ++ H D PG +LT N
Sbjct: 469 R---VLSGSISERIVDCIIRLPVKWETTTQF------KATHILDFGPGGASGLGVLTHRN 519
Query: 432 VCGE-IKITDFG-LSKVMDEE 450
G +++ G L D++
Sbjct: 520 KDGTGVRVIVAGTLDINPDDD 540
Score = 57.4 bits (138), Expect = 1e-08
Identities = 83/498 (16%), Positives = 150/498 (30%), Gaps = 142/498 (28%)
Query: 165 APSTPTSTLHNGTDSATFLKPEPLPGMSSQ--EYYEADEILKLRQSALKKEDAD------ 216
A ST TL +G+ L P ++SQ E + A E
Sbjct: 3 AYSTRPLTLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAELVG 62
Query: 217 --LQLEMEKLERERNLHIRE-LKRIHNEDQSRFNNHPVLSDSYLIGYKNLHIRELKRIHN 273
L +E + + L E F N YL G ++H K +
Sbjct: 63 KFLGYVSSLVEPSKVGQFDQVLNLCLTE----FEN------CYLEG-NDIHALAAKLLQE 111
Query: 274 EDQSRFNNHPVLSDRYLLLMLLG----KGGFSEVHKAFDLKEQRYVACKVHQLNKD--WK 327
D + ++ + ++ K S + +A + VA Q N D ++
Sbjct: 112 NDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFE 171
Query: 328 EDKKANYIKHALRE-YNIHKALDHPRVVKLYDVFEIDANSFCTVLE--------YCDGHD 378
E LR+ Y + L + D+ + A + ++ + G +
Sbjct: 172 E----------LRDLYQTYHVL-------VGDLIKFSAETLSELIRTTLDAEKVFTQGLN 214
Query: 379 LDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKP---PVI------HY-------DLKP 422
+ +L+ +++ YL I P P+I HY P
Sbjct: 215 ILEWLENPSNTPDKD-------------YLLSI-PISCPLIGVIQLAHYVVTAKLLGFTP 260
Query: 423 GNIL-LTEG-NVCGEIKITDFGLSKVMDEENY--NPDHGMDLT------SQGAGTYWYLP 472
G + +G + +T +++ E++ + + + A LP
Sbjct: 261 GELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLP 320
Query: 473 P----ECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATE 528
P + + P S + + + Q Q + + N+ L A +
Sbjct: 321 PSILEDSLENNEGVP--SPMLSI--SNL------------TQEQVQDYVNKTNSHLPAGK 364
Query: 529 -VQFA--NKPT---VSNEAKGFIRS----CLAYRKEDRIDVISLARHDYLQPPVPKHGRQ 578
V+ + N VS G +S L RK A Q +P R+
Sbjct: 365 QVEISLVNGAKNLVVS----GPPQSLYGLNLTLRKAK-------APSGLDQSRIPFSERK 413
Query: 579 SASS------SAPVGHSP 590
S ++P HS
Sbjct: 414 LKFSNRFLPVASPF-HSH 430
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 62.0 bits (151), Expect = 1e-10
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 27/168 (16%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
Y + +G+G F + + +L + VA K E ++++ EY +K
Sbjct: 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIK--------FEPRRSDA-PQLRDEYRTYK 60
Query: 347 ALDH-PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH------KTIAEREARSIVM 399
L + +Y F + V++ G L+ L KT+A
Sbjct: 61 LLAGCTGIPNVYY-FGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVA-----MAAK 113
Query: 400 QVVSALKYLNEIKPPVIHYDLKPGNILL--TEGNVCGEIKITDFGLSK 445
Q+++ ++ ++E +++ D+KP N L+ I + DFG+ K
Sbjct: 114 QMLARVQSIHEKS--LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 61.2 bits (149), Expect = 3e-10
Identities = 40/167 (23%), Positives = 66/167 (39%), Gaps = 27/167 (16%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKA 347
+ + +G G F E+ +L YVA K+ E K+ EY +K
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL--------EPMKSRA-PQLHLEYRFYKQ 60
Query: 348 LDH-PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH------KTIAEREARSIVMQ 400
L + ++Y F VLE G L+ KT+ I +Q
Sbjct: 61 LGSGDGIPQVYY-FGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVL-----MIAIQ 113
Query: 401 VVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGE--IKITDFGLSK 445
++S ++Y++ +I+ D+KP N L+ + I I DF L+K
Sbjct: 114 LISRMEYVHSKN--LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 59.6 bits (144), Expect = 1e-09
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 23/117 (19%)
Query: 396 SIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK-VMDEENYNP 454
QV +++L K IH DL NILL+E NV KI DFGL++ + + +Y
Sbjct: 197 CYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVV---KICDFGLARDIYKDPDY-- 249
Query: 455 DHGMDLTSQGAGTY---WYLPPECFVVGKNPPKISSKVDVWSVGVIFYQ-CLYGKKP 507
+G W + PE + + DVWS GV+ ++ G P
Sbjct: 250 ------VRKGDARLPLKW-MAPETIFDR----VYTIQSDVWSFGVLLWEIFSLGASP 295
Score = 46.8 bits (111), Expect = 1e-05
Identities = 38/179 (21%), Positives = 60/179 (33%), Gaps = 9/179 (5%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
DR L LG+G F +V +A D A K KE + + + E I
Sbjct: 22 DRLKLGKPLGRGAFGQVIEA-DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 80
Query: 347 ALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSAL 405
+ H VV L ++E+C +L YL+ + ++ +
Sbjct: 81 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKTKGARFRQGK 139
Query: 406 KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFG-LSKVMDEENYNPDHGMDLTSQ 463
Y+ I DLK +T + LS V +EE + LT +
Sbjct: 140 DYVGA-----IPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLE 193
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 58.5 bits (141), Expect = 3e-09
Identities = 33/161 (20%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 287 DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHK 346
+++ L +G G F E++ +++ VA K E+ K + L E I++
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK--------LENVKTKH-PQLLYESKIYR 57
Query: 347 AL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARSIVMQVVSA 404
L + + F ++ + V++ G L D + + ++ + + Q+++
Sbjct: 58 ILQGGTGIPNVRW-FGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINR 115
Query: 405 LKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
+++++ +H D+KP N L+ G ++ I DFGL+K
Sbjct: 116 VEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 56.7 bits (137), Expect = 8e-09
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNI--- 344
+++L +G GGF ++ AF + A V ++ E ++ + L+ Y
Sbjct: 38 QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKV-----EYQENGPLFSELKFYQRVAK 92
Query: 345 ---------HKALDHPRVVKLYD--VFEIDANSF-CTVLEYCDGHDLDFYLKQHKTIAER 392
K LD+ + Y + E S+ V+E G DL Q+ T +
Sbjct: 93 KDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKS 151
Query: 393 EARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
+ ++++ L+Y++E + +H D+K N+LL N ++ + D+GLS
Sbjct: 152 TVLQLGIRMLDVLEYIHENE--YVHGDIKAANLLLGYKN-PDQVYLADYGLSY 201
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 49.4 bits (118), Expect = 2e-06
Identities = 20/188 (10%), Positives = 64/188 (34%), Gaps = 39/188 (20%)
Query: 284 VLSD----RYLLLMLLGKGGFSEVHKAFDL--------KEQRYVACKV-HQLNKDWKEDK 330
VL+D ++ L + +++A +++ + K+ + + + E
Sbjct: 35 VLTDKSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQN 94
Query: 331 --KANYIKHALREYNIHKALDHPRVVKLYD-----------VFEIDANSFCTVLEYCDGH 377
+ + ++ + + V S + L+ H
Sbjct: 95 FFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKH 154
Query: 378 DLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIK 437
L +++ + +++ AL++L+E + +H ++ NI + + ++
Sbjct: 155 VLSE-----RSVL-----QVACRLLDALEFLHENE--YVHGNVTAENIFVDPED-QSQVT 201
Query: 438 ITDFGLSK 445
+ +G +
Sbjct: 202 LAGYGFAF 209
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 48.6 bits (116), Expect = 4e-06
Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 288 RYLLLMLLGKGGFSEVHKAFDLKEQ-----RYVACKVH-----QLNKDWKEDKKANYIKH 337
+ + + +G+GGF ++ A + KV L + K ++A
Sbjct: 36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAK-PE 94
Query: 338 ALREYNIHKALDHPRVVKLYD--VFEIDANSF-CTVLEYCDGHDL-DFYLKQHKTIAERE 393
++++ + L + V K + + + + S+ +++ G DL Y K + +
Sbjct: 95 QIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKT 153
Query: 394 ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSK 445
+ ++++ L+Y++E + +H D+K N+LL N ++ + D+GL+
Sbjct: 154 VLQLSLRILDILEYIHEHE--YVHGDIKASNLLLNYKN-PDQVYLVDYGLAY 202
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn
complex, rRNA processing, transferase; HET: ADP; 1.75A
{Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB:
1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Length = 282
Score = 43.4 bits (102), Expect = 1e-04
Identities = 31/181 (17%), Positives = 62/181 (34%), Gaps = 33/181 (18%)
Query: 285 LSDRYLLLML---LGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKH---- 337
L + + +G+G S V + ++ K H++ + K
Sbjct: 85 LVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHF 143
Query: 338 -------ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA 390
A E+ + L V K+Y ++E D +L + +
Sbjct: 144 SVLAIRSARNEFRALQKLQGLAVPKVYAW-----EGNAVLMELIDAKEL----YRVRVEN 194
Query: 391 EREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEE 450
E ++++ V+ + ++H DL N+L++E + I DF S + EE
Sbjct: 195 PDEVLDMILEEVAKFYHRG-----IVHGDLSQYNVLVSEEGIW----IIDFPQSVEVGEE 245
Query: 451 N 451
Sbjct: 246 G 246
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase,
phosphorylation, transferase-antibiotic COMP; HET: ANP
B31; 2.10A {Enterococcus faecalis} PDB: 2b0q_A* 1l8t_A*
3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Length = 263
Score = 42.3 bits (99), Expect = 2e-04
Identities = 21/113 (18%), Positives = 31/113 (27%), Gaps = 24/113 (21%)
Query: 376 GHDLDFYLKQHKTIAER----------EARSIVMQVVSALKYLNEIKPP----VIHYDLK 421
+ LD L + + E + +L KP H DL
Sbjct: 132 TNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLG 191
Query: 422 PGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPE 474
NI + +G V G D G S D+ D+ + E
Sbjct: 192 DSNIFVKDGKVSG---FIDLGRSGRADKW-------YDIAFCVRSIREDIGEE 234
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase;
endopeptidase activity, protein kinase activity; HET:
TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A*
2vwb_A*
Length = 540
Score = 41.5 bits (98), Expect = 7e-04
Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 18/102 (17%)
Query: 359 VFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHY 418
+F++D ++ ++ Y +G ++ + IA + + + N++ IH
Sbjct: 406 IFDVDLDNKRIMMSYINGKLAKDVIEDNLDIAYKIGEIV------GKLHKNDV----IHN 455
Query: 419 DLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDL 460
DL N + ++ I DFGL K+ + + D +DL
Sbjct: 456 DLTTSNFIFD-----KDLYIIDFGLGKISNLDE---DKAVDL 489
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase,
aminoglycoside, phosphorylation, transferase-antibiotic
complex; HET: TOY; 1.80A {Enterococcus casseliflavus}
PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A*
3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A*
4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Length = 304
Score = 40.6 bits (95), Expect = 0.001
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 12/80 (15%)
Query: 376 GHDLDFYLKQHKTIAEREARSIVMQVVSAL--KYLNEIKPP-----VIHYDLKPGNILL- 427
++ K+ K + RE + M+ V L +IH D +IL
Sbjct: 147 REKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFD 206
Query: 428 -TEGNVCGEIKITDFGLSKV 446
+ +CG I DFG + +
Sbjct: 207 TEKNTICG---IIDFGDAAI 223
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase,
kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP:
d.144.1.6
Length = 264
Score = 40.0 bits (93), Expect = 0.001
Identities = 19/112 (16%), Positives = 27/112 (24%), Gaps = 23/112 (20%)
Query: 376 GHDLDFYLKQHKTIAEREARSI--------VMQVVSALKYLNEIKPP-----VIHYDLKP 422
H +++ +T E + L P V H D
Sbjct: 134 DHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACL 193
Query: 423 GNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPE 474
NI++ G G D G V D D+ L E
Sbjct: 194 PNIMVENGRFSG---FIDCGRLGVADRY-------QDIALATRDIAEELGGE 235
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for
structural genomics of infec diseases, csgid; HET: MSE
ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A*
4dca_A* 3hav_A* 3ham_A*
Length = 320
Score = 39.8 bits (92), Expect = 0.002
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 412 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMD 448
P ++H D N++ + G + DFG V D
Sbjct: 206 TPCLVHNDFSANNMIFRNNRLFG---VIDFGDFNVGD 239
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural
protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Length = 308
Score = 38.5 bits (89), Expect = 0.005
Identities = 26/202 (12%), Positives = 63/202 (31%), Gaps = 30/202 (14%)
Query: 206 RQSALKKEDADLQLEMEKLERERNLHIRELKRIHNEDQSRFNNHPVLSDSYLIGYKNLHI 265
+ S L E D+ + N++ R + + ++ + +D +
Sbjct: 62 QSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLL---YFAYADYE---ESRMKY 115
Query: 266 RELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKD 325
++ I+N + + P L + G F ++
Sbjct: 116 EKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIF----KKAREDA------- 164
Query: 326 WKEDKKANYIKHALREYNIHKALDHPRVVKLYD-VFEIDANSFCTVLEYCDGHDLDFYLK 384
+ Y+ AL EY K K+++ + + VL Y +D+
Sbjct: 165 --RTRHHVYVTAALMEYYCSKDKSVAF--KIFELGLKKYGDIPEYVLAY-----IDYLSH 215
Query: 385 QHKTIAEREARSIVMQVVSALK 406
++ + R + +V+++
Sbjct: 216 LNE---DNNTRVLFERVLTSGS 234
>2q83_A YTAA protein; 2635576, structural genomics, joint center for
structu genomics, JCSG, protein structure initiative,
PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus
subtilis}
Length = 346
Score = 37.3 bits (86), Expect = 0.011
Identities = 19/124 (15%), Positives = 37/124 (29%), Gaps = 11/124 (8%)
Query: 318 KVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGH 377
H + ++ R N + R ++ +
Sbjct: 135 DFHTASVGYQPPNGVPIFTKLGRWPNHYTK----RCKQMETWKLMAEAEKEDPFSQLYLQ 190
Query: 378 DLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIK 437
++D +++ I +R +S + LK + H D GN LL E +I
Sbjct: 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNL----CHQDYGTGNTLLGEN---EQIW 243
Query: 438 ITDF 441
+ D
Sbjct: 244 VIDL 247
>4fev_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine,
PP1, protein kinase inhibitor; HET: KAN PP1; 1.89A
{Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A*
4ej7_A* 3r78_A*
Length = 272
Score = 36.2 bits (83), Expect = 0.021
Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 3/36 (8%)
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMD 448
V H D N++ EG + G D G + D
Sbjct: 193 SVVTHGDFSLDNLIFDEGKLIG---CIDVGRVGIAD 225
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer,
antibiotic resistance, transfer; HET: GDP; 1.70A
{Enterococcus gallinarum} PDB: 3tdv_A*
Length = 306
Score = 34.2 bits (78), Expect = 0.10
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 413 PPVIHYDLKPGNILLTEGNVCGEIK-ITDFGLSKVMD 448
P +IH DL P + L + + I DFG + + D
Sbjct: 190 PRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD 226
>2xs1_A Programmed cell death 6-interacting protein; protein
transport-viral protein complex, cell cycle; 2.30A {Homo
sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A
2ojq_A
Length = 704
Score = 33.4 bits (75), Expect = 0.23
Identities = 15/83 (18%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 198 EADEILKLRQSALKKEDADLQLEMEKLERERNLHIRELKRIHNEDQSRFNNHPVLSDSYL 257
A+ ++ S + L ++++++ER +LK ++ + S+F L+ +
Sbjct: 542 SANPAKTMQGSEVVNVLKSLLSNLDEVKKEREGLENDLKSVNFDMTSKFLT--ALAQDGV 599
Query: 258 IGYKNLHIRELKRIHNEDQSRFN 280
I + L + EL R++ ++
Sbjct: 600 INEEALSVTELDRVYGGLTTKVQ 622
>3v47_C Flagellin; innate immunity, leucine-rich repeat, innate immune
receptor system; HET: NAG; 2.47A {Salmonella enterica
subsp}
Length = 425
Score = 31.9 bits (71), Expect = 0.62
Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 10/91 (10%)
Query: 99 QEEITAEREEIDR--------QKKLLNKKRPTNAETGRKRAGSQSGGAGTQANSAGAVGS 150
Q+EI EEIDR K+L++ + G ++ Q ++G
Sbjct: 72 QDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGAN--DGETITIDLQKIDVKSLGL 129
Query: 151 GGVAGTPTGPVTPTAPSTPTSTLHNGTDSAT 181
G T + + A
Sbjct: 130 DGFNVNGPKEATVGDLKSSFKNVTGYDTYAA 160
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex,
transferase; HET: CPS ADP; 2.00A {Bacillus subtilis}
SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A*
2pup_A*
Length = 397
Score = 31.8 bits (71), Expect = 0.62
Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
Query: 373 YCDGHDLDFYLKQHKTIAEREARSIVMQVVSALKY-LNEIKPPVIHYDLKPGNILLTEGN 431
+ D DF + + + V + LK +IH DL G+I +E
Sbjct: 186 FFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASE-- 243
Query: 432 VCGEIKITDF 441
E K+ D
Sbjct: 244 --HETKVIDP 251
>3a5c_G V-type ATP synthase subunit D; V-ATPase, asymmetric, rotation,
vacuolar type, hydrolase, ATP synthesis, ATP-binding,
hydrogen ION transport; HET: ADP; 4.51A {Thermus
thermophilus} PDB: 3a5d_G 3j0j_G*
Length = 223
Score = 31.3 bits (70), Expect = 0.67
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Query: 93 KKINERQEEITAEREEIDRQKKLLNKKRPTNAET-GRKRAGSQSGGAG 139
+ I + E+ ERE+ R K++ K AE G + GAG
Sbjct: 177 RFIQQVLEQ--REREDTFRLKRIKGKIEAREAEEEGGRPNPQVEIGAG 222
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 30.5 bits (68), Expect = 1.1
Identities = 11/56 (19%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 198 EADEILKLRQS---ALKKEDADLQLEMEKLERERNLHIRELKRIHNE--DQSRFNN 248
E + I K R+ L++ DA ++ ++ + + E + +E ++++ NN
Sbjct: 83 EPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNKINN 138
Score = 30.1 bits (67), Expect = 1.4
Identities = 6/41 (14%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 93 KKINERQEEITAEREEIDRQKK--LLNKKRPTNAETGRKRA 131
+K E Q + E + + + K + E ++++
Sbjct: 88 RKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQS 128
Score = 29.0 bits (64), Expect = 4.0
Identities = 9/43 (20%), Positives = 16/43 (37%), Gaps = 3/43 (6%)
Query: 87 RPLADSKKINERQEEITAEREEIDRQKKLLNKKRPTNAETGRK 129
R + + I + +EE +E+D K E +K
Sbjct: 79 RLTQEPESIRKWREEQRKRLQELDAASK---VMEQEWREKAKK 118
Score = 29.0 bits (64), Expect = 4.0
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 89 LADSKKINERQEEITAEREEIDRQKKLLNKKRPTNAETGRKRA 131
+A + ++ + E I REE Q+K L + +A +
Sbjct: 74 IAQADRLTQEPESIRKWREE---QRKRLQEL---DAASKVMEQ 110
Score = 28.6 bits (63), Expect = 4.4
Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 27/83 (32%)
Query: 52 PEKLRP-TERKRKR--KGDDANMSVGGPLMKGGGGGNARPLADSKKINERQEEITAEREE 108
PE +R E +RKR + D A SK QE +++
Sbjct: 84 PESIRKWREEQRKRLQELD----------------------AASKV--MEQEWREKAKKD 119
Query: 109 IDRQKKLLNKKRPTNAETGRKRA 131
++ + +++ N R
Sbjct: 120 LEEWNQRQSEQVEKNKINNRIAD 142
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR
genomics, joint center for structural genomics, JCSG,
prote structure initiative; HET: MSE; 2.55A
{Mesorhizobium loti}
Length = 301
Score = 30.8 bits (69), Expect = 1.1
Identities = 22/177 (12%), Positives = 42/177 (23%), Gaps = 27/177 (15%)
Query: 280 NNHPVLSDR---YLLLMLLGKGGFSEVHKAFDLKEQRYVACKV---HQLNKDWKEDKKAN 333
+R + K G S D V + ++ + + + +
Sbjct: 47 KGTEEYINRANEAVAAREAAKAGVSPEVLHVDPATGVMVTRYIAGAQTMSPEKFKTRPGS 106
Query: 334 YIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 393
+ +H +++F D L
Sbjct: 107 PARAGEAFRKLHG--SGAVFPFRFELFA-------------MIDDYLKVLSTKNVTLPAG 151
Query: 394 ARSIVMQVVSALKYLNEIKPPVI--HYDLKPGNILLTEGNVCGEIKITDFGLSKVMD 448
+V + L P+ H D N L T + I D+ S + D
Sbjct: 152 YHDVVREAGGVRSALAAHPLPLAACHCDPLCENFLDTG----ERMWIVDWEYSGMND 204
>1io1_A Phase 1 flagellin; beta-folium, structural protein; 2.00A
{Salmonella typhimurium} SCOP: e.32.1.1
Length = 398
Score = 31.1 bits (69), Expect = 1.1
Identities = 15/91 (16%), Positives = 28/91 (30%), Gaps = 10/91 (10%)
Query: 99 QEEITAEREEIDR--------QKKLLNKKRPTNAETGRKRAGSQSGGAGTQANSAGAVGS 150
Q EIT EIDR K+L + + G ++ + ++ +G
Sbjct: 60 QAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGAN--DGETIDIDLKQINSQTLGL 117
Query: 151 GGVAGTPTGPVTPTAPSTPTSTLHNGTDSAT 181
+ V+ TA + +
Sbjct: 118 DTLNVQQKYKVSDTAATVTGYADTTIALDNS 148
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase,
structural genomics CONS SGC, hemicholinium-3,
phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens}
PDB: 3lq3_A* 2ig7_A*
Length = 379
Score = 31.0 bits (69), Expect = 1.2
Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 11/123 (8%)
Query: 325 DWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK 384
+E ++ + ++ P + + +F +E D
Sbjct: 138 KTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFG--------TMERYLKQIQDLPPT 189
Query: 385 QHKTIAEREARSIVMQVVSALKYLNEIKPPVI--HYDLKPGNILLT-EGNVCGEIKITDF 441
+ E S+ ++ + K L PV+ H D++ GNILL E + + DF
Sbjct: 190 GLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDF 249
Query: 442 GLS 444
S
Sbjct: 250 EYS 252
>1uax_A Ribonuclease HII, ribonuclease H2; RNA*DNA hybrid
ribonucleotidohydrolase, hydrolase; 2.00A {Pyrococcus
horikoshii} SCOP: c.55.3.1
Length = 220
Score = 30.3 bits (69), Expect = 1.3
Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 15/44 (34%)
Query: 89 LADSKKINERQ-----EEIT----------AEREEIDRQKKLLN 117
+ DSK++ Q ++ +EID + +N
Sbjct: 38 VKDSKQLTPGQREKLFSKLIDILDDYYVLLVTPKEIDERHHSMN 81
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside
phosphotransferase, antibiotic resistance; HET: MES PG4;
1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A*
3q2m_A*
Length = 339
Score = 30.8 bits (69), Expect = 1.3
Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 18/93 (19%)
Query: 390 AEREARSIVMQVVSALKYLNEIKPP------VIHYDLKPGNILLTEGNVCGEIKITDFGL 443
+ + + ++V + L++ P + H D+ GN+L+ I I D+
Sbjct: 177 FFNQNSAAIHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVGNE---ESIYIIDWDE 233
Query: 444 SKVMDEENYNPDHGMDL--TSQGAGTYWYLPPE 474
+ +E DL G G W P E
Sbjct: 234 PMLAPKER-------DLMFIGGGVGNVWNKPHE 259
>1rid_A Complement control protein; regulation, SCR, immune system; HET:
IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1
g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A
1vvc_A 1vvd_A 1vve_A
Length = 244
Score = 30.6 bits (69), Expect = 1.4
Identities = 15/71 (21%), Positives = 23/71 (32%), Gaps = 5/71 (7%)
Query: 449 EENYNPDHGMDLTSQGAGTYWYLPPECFVVG-KNPPKI---SSKVDVWSVG-VIFYQCLY 503
Y + ++ GT W L +C +P I + G I Y C
Sbjct: 36 LPGYRKQKMGPIYAKCTGTGWTLFNQCIKRRCPSPRDIDNGQLDIGGVDFGSSITYSCNS 95
Query: 504 GKKPFGHNQSQ 514
G G ++S
Sbjct: 96 GYHLIGESKSY 106
>3tq7_B Microtubule-associated protein RP/EB family membe; CAP-Gly domain,
protein-protein interaction, microtubule BIN
cytoskeleton, protein binding; 2.30A {Homo sapiens}
Length = 82
Score = 28.3 bits (63), Expect = 1.7
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 208 SALKKEDADLQLEMEKLERERNLHIRELKRI 238
L ++ DL+L ++ LE+ER+ + +L+ I
Sbjct: 4 LELNQQLVDLKLTVDGLEKERDFYFSKLRDI 34
>1ucu_A Phase 1 flagellin; flagellar filament, cryo-electron microscopy,
helical reconstruction, structural protein; 4.00A
{Salmonella typhimurium} SCOP: e.32.1.1 PDB: 3a5x_A
Length = 494
Score = 30.5 bits (68), Expect = 1.7
Identities = 19/94 (20%), Positives = 27/94 (28%), Gaps = 11/94 (11%)
Query: 99 QEEITAEREEIDR--------QKKLLNKKRPTNAETGRKRAGSQS---GGAGTQANSAGA 147
Q EIT EIDR K+L + + G + +Q
Sbjct: 112 QAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDT 171
Query: 148 VGSGGVAGTPTGPVTPTAPSTPTSTLHNGTDSAT 181
+ T T + T L N T A+
Sbjct: 172 LNVQQKYKVSDTAATVTGYADTTIALDNSTFKAS 205
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics,
joint center for structural genomics, JCSG, protein
structure initiative; 1.85A {Thermobifida fusca} PDB:
3f7w_A
Length = 288
Score = 30.0 bits (67), Expect = 2.1
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Query: 387 KTIAEREARSIVMQVVSALKYL--NEIKPPVIHYDLKPGNILLTEGNVC 433
+ +V +V+ AL +L + P IH DL GN+L +
Sbjct: 160 RGALTPGDVRLVEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQDDGAV 208
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha
solenoid, regulatory PART LID, hydrolase, protein
binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Length = 394
Score = 30.2 bits (67), Expect = 2.2
Identities = 33/217 (15%), Positives = 62/217 (28%), Gaps = 19/217 (8%)
Query: 191 MSSQEYYEADEILKLRQSALKK-EDADLQLEMEKLERERNLHIRELKRIHNE-DQSRFNN 248
+ Y EA + LKK +D +L +E++ LE + + L + +R
Sbjct: 110 FDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTA 169
Query: 249 HPVLSDSYLIGYKNLHIRELKRIHNEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFD 308
+ + + G +L L D ++ + GF V
Sbjct: 170 NAIYCPPKVQGALDLQSGILHAADERDFKTAFSYFYEA----------FEGFDSVDSVKA 219
Query: 309 LKEQRY-VACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSF 367
L +Y + CK+ D D Y+ V + + F
Sbjct: 220 LTSLKYMLLCKIMLGQSD---DVNQLVSGKLAITYSGRDIDAMKSVAEASHKRSLA--DF 274
Query: 368 CTVLE-YCDGHDLDFYLKQHKTIAEREARSIVMQVVS 403
L+ Y D ++ H + +
Sbjct: 275 QAALKEYKKELAEDVIVQAHLGTLYDTMLEQNLCRII 311
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 29.1 bits (64), Expect = 2.2
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 7/31 (22%)
Query: 198 EADEILKLRQSALKKEDAD------LQLEME 222
E + KL Q++LK D ++ ME
Sbjct: 18 EKQALKKL-QASLKLYADDSAPALAIKATME 47
>1wck_A BCLA protein; collagen-like protein, bacterial surface antigen,
jelly- roll topology, structural protein; 1.36A
{Bacillus anthracis}
Length = 220
Score = 29.6 bits (66), Expect = 2.5
Identities = 9/56 (16%), Positives = 12/56 (21%), Gaps = 6/56 (10%)
Query: 131 AGSQSGGAGTQANSAGAVGSGGVAG--TPTGPVTPTAPSTPTSTLHNGTDSATFLK 184
G+ S A + VT S T + S K
Sbjct: 161 PGTGSSLISLGAPIVIQAITQITTTPSLVEVIVTGLGLSLALGT----SASIIIEK 212
Score = 28.4 bits (63), Expect = 6.0
Identities = 9/61 (14%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Query: 122 TNAETGRKRAGSQSGGAGTQANSAGAVGSGGVAGTPTGPVTPTAPSTPT-STLHNGTDSA 180
+ETG + + A + GV TG + + + T +
Sbjct: 127 VISETGFYKITVIANTATASVLGGLTIQVNGVPVPGTGSSLISLGAPIVIQAITQITTTP 186
Query: 181 T 181
+
Sbjct: 187 S 187
Score = 28.4 bits (63), Expect = 6.9
Identities = 12/63 (19%), Positives = 19/63 (30%), Gaps = 4/63 (6%)
Query: 126 TGRKRAGSQSGGAGTQANSA--GAVGSGGVAGTPTGPVTPTAPSTPTS-TLHNGTDSATF 182
+ G G G+ S V T T P T +L GT ++
Sbjct: 151 LTIQVNGVPVPGTGSSLISLGAPIVIQAITQIT-TTPSLVEVIVTGLGLSLALGTSASII 209
Query: 183 LKP 185
++
Sbjct: 210 IEK 212
Score = 28.0 bits (62), Expect = 9.1
Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 145 AGAVGSGGVAGTPTGPVTPTAPSTPT 170
G G G G TG PT P+ PT
Sbjct: 34 TGPTGPTGPTG-DTGTTGPTGPTGPT 58
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding,
metal-binding, zinc-finger, translation; HET: TM2 PAR;
2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E*
1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B
1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B*
1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Length = 256
Score = 29.5 bits (67), Expect = 2.6
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 211 KKEDADLQLEMEKLERERNLH-IRELKRI 238
KKE L+ E+E+L ++ L R LKR+
Sbjct: 132 KKEQVRLKHELERL--QKYLSGFRLLKRL 158
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer
RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia
coli} PDB: 2ykr_B 3fih_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B
3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 3i1m_B
1vs7_B* 3e1a_B 3e1c_B 1vs5_B 3i1o_B 3i1q_B ...
Length = 218
Score = 29.4 bits (67), Expect = 2.7
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 211 KKEDADLQLEMEKLERERNLH-IRELKRI 238
KKE E+EKL E +L I+++ +
Sbjct: 123 KKEALMRTRELEKL--ENSLGGIKDMGGL 149
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics
consortium, transferase; 2.41A {Plasmodium vivax}
Length = 458
Score = 30.1 bits (66), Expect = 2.7
Identities = 39/317 (12%), Positives = 94/317 (29%), Gaps = 23/317 (7%)
Query: 158 TGPVTPTAPSTPTSTLHNGTDSATFLKPEPLPGMSSQEYYEADEILKLRQSALKKEDADL 217
+ P + ++ ST T++ P+ + + D K ++ K
Sbjct: 22 SPPFPLRSKTSVGSTNSQITETKNKQGVYPITESNLRILEGEDRSEKAKELLKKYVSNVF 81
Query: 218 QLEMEKLERERNLHIRELKRIHNEDQSRFNNHPVLSD-----SYLIGYKNLHIRELKRIH 272
+ E + + + K + N ++ +++ + + + L R++
Sbjct: 82 ENEKTLYIYCKYVMLHYGKDLVNPNEVDSLEFQIINGGITNILIKVKDMSKQAKYLIRLY 141
Query: 273 NEDQSRFNNHPVLSDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLN-KDWKEDKK 331
N + +L ++ F + + L+ +D K K
Sbjct: 142 GPKTDEIINRE---REKKISCILYNKNIAKKIYVFFTNGRIEEFMDGYALSREDIKNPKF 198
Query: 332 ANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE 391
I L+ H + + K V + + + L ++ K I
Sbjct: 199 QKLIAKNLKLL--HDIKLNENLYKELQVTQKVPGTRPSFLWNTIWKYFHLLNEERKKICS 256
Query: 392 REARSIVMQVVSALKYLNEIK-----------PPVI-HYDLKPGNILLTEGNVCGEIKIT 439
+A++ +++++ + I P V+ H DL NI+ T G
Sbjct: 257 FDAKANILKLIDFDVLRDSIVEVESLCKRENSPIVLCHCDLLSSNIINTVGGGEAGELGE 316
Query: 440 DFGLSKVMDEENYNPDH 456
+ +
Sbjct: 317 AGETGEGGETGEGGETG 333
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics,
joint center for structural genomics, JCSG; HET: MSE
UNL; 2.32A {Haemophilus somnus 129PT}
Length = 312
Score = 29.4 bits (65), Expect = 3.2
Identities = 6/34 (17%), Positives = 14/34 (41%)
Query: 409 NEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFG 442
+ KP ++H +L N + + + +G
Sbjct: 203 HNPKPSILHGNLWIENCIQVDDKIFVCNPACYWG 236
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation,
mitosis, K phosphorylation, mitotic spindle,
microtubules, cell cycle; 2.45A {Saccharomyces
cerevisiae}
Length = 106
Score = 28.0 bits (61), Expect = 3.8
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 208 SALKKEDADLQLEMEKLERERNLHIRELKRI 238
+L +E + + LE ER + +L+ I
Sbjct: 21 GSLNEEIEQYKGTVSTLEIEREFYFNKLRDI 51
>3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane
fusion, viral P glycoprotein B, HSV-1, membrane; HET:
NAG; 2.26A {Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A*
3nwd_A*
Length = 703
Score = 29.5 bits (66), Expect = 4.0
Identities = 15/115 (13%), Positives = 32/115 (27%), Gaps = 9/115 (7%)
Query: 136 GGAGTQANSAGAVGSGGVAGTPTGPVTPTAPSTPTST----LHNGTDSATFLKPEPLPGM 191
+ A + G P P P + PT + + T +P
Sbjct: 3 AAPTSPGTPGVAAATQAANGGPATPAPPALGAAPTGDPKPKKNKKPKNPTPPRPAGDNAT 62
Query: 192 SSQEYYEADEILKLRQSALKKED-----ADLQLEMEKLERERNLHIRELKRIHNE 241
+ + E L+ ++ + + + E+ R R + + E
Sbjct: 63 VAAGHATLREHLRDIKAENTDANFYVCPPPTGATVVQFEQPRRCPTRPEGQNYTE 117
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug
transporter; 3.50A {Escherichia coli}
Length = 375
Score = 29.1 bits (66), Expect = 4.3
Identities = 7/38 (18%), Positives = 9/38 (23%)
Query: 128 RKRAGSQSGGAGTQANSAGAVGSGGVAGTPTGPVTPTA 165
AG+ G N V + A P
Sbjct: 321 PFLAGTAGALVGGLQNIGSGVLASLSAMLPQTGQGSLG 358
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant
methionine recycling, refol transferase; HET: SR1 ADP;
1.90A {Arabidopsis thaliana}
Length = 420
Score = 29.2 bits (64), Expect = 4.5
Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 408 LNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDF 441
E +IH DL G++++T+ ++ D
Sbjct: 227 FCERAQALIHGDLHTGSVMVTQ----DSTQVIDP 256
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast
ribosome, ribonucleoprotein particle, macromolecular
complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Length = 231
Score = 28.6 bits (65), Expect = 4.7
Identities = 5/29 (17%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Query: 211 KKEDADLQLEMEKLERERNLH-IRELKRI 238
K++ A ++ ++ L + L I+ + +
Sbjct: 131 KRDAAVVKRQLSHL--QTYLGGIKYMTGL 157
>3aon_A V-type sodium ATPase subunit D; V-ATPase, coiled-coil, alpha/beta
fold, hydrol Na(+)-ATPase, NTPA3-NTPB3, NTPC, central
AXIS; HET: MSE; 2.00A {Enterococcus hirae}
Length = 217
Score = 28.5 bits (63), Expect = 5.4
Identities = 9/28 (32%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Query: 93 KKINERQEEITAEREEIDRQKKLLNKKR 120
I + EE ER E+ R K+ N
Sbjct: 190 YYIKMKLEE--NERAEVTRLIKVKNMGT 215
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural
genomics, PSI, protein structure initiative; 2.80A
{Escherichia coli} SCOP: d.144.1.6
Length = 328
Score = 28.9 bits (64), Expect = 5.8
Identities = 9/74 (12%), Positives = 19/74 (25%), Gaps = 10/74 (13%)
Query: 376 GHDLDFYLKQHKTIAEREARSIVMQVVSALKYLNEIKPP-----VIHYDLKPGNILLTEG 430
+ + I + + + + +H D GNIL +G
Sbjct: 153 LIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRDG 212
Query: 431 NVCGEIKITDFGLS 444
+ D +
Sbjct: 213 PM-----FVDLDDA 221
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus
norvegicus}
Length = 96
Score = 27.2 bits (60), Expect = 6.0
Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Query: 198 EADEILKLRQSALKKEDADLQLEMEKLERERNLHIRELKRIHNEDQSRFNNHPVLSDSYL 257
E L+ L E+ L E+E +E+ R + L+++ E R + Y
Sbjct: 4 SDSEQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAE-AERLDQE---EAQYQ 59
Query: 258 IGYKNLHIRELKRIHNEDQS 277
Y R+ + +E +S
Sbjct: 60 REYSEFK-RQQLELDDELKS 78
>3k8w_A Flagellin homolog; flagellum, structural protein, bacterial
flagellu; 1.70A {Sphingomonas SP} PDB: 2zbi_A 3k8v_A
Length = 326
Score = 28.8 bits (64), Expect = 6.2
Identities = 16/92 (17%), Positives = 26/92 (28%), Gaps = 9/92 (9%)
Query: 99 QEEITAEREEIDR--------QKKLLNKKRPT-NAETGRKRAGSQSGGAGTQANSAGAVG 149
Q E+T + EI R +KLL+ + G + A +A G
Sbjct: 93 QAEVTQLQSEIQRVAEQTSFNGQKLLDGSFNGVQFQIGANAGETIGVSKIMNAQTASLGG 152
Query: 150 SGGVAGTPTGPVTPTAPSTPTSTLHNGTDSAT 181
S + T T + +
Sbjct: 153 SLTRTTSTIDATDLTKYDTAMAAGDLTINGVD 184
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium
falciparum} SCOP: c.2.1.4 c.23.12.3
Length = 479
Score = 28.6 bits (64), Expect = 7.6
Identities = 9/23 (39%), Positives = 11/23 (47%), Gaps = 2/23 (8%)
Query: 410 EIKPPVIHYDLKPGN--ILLTEG 430
+KP V L GN I+L G
Sbjct: 365 NVKPQVDRITLPNGNKIIVLARG 387
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.312 0.130 0.375
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 9,346,824
Number of extensions: 573219
Number of successful extensions: 2517
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1341
Number of HSP's successfully gapped: 307
Length of query: 627
Length of database: 6,701,793
Length adjustment: 99
Effective length of query: 528
Effective length of database: 3,937,614
Effective search space: 2079060192
Effective search space used: 2079060192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.0 bits)