BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4991
(122 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
Query: 8 TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
T LN + RE I K L+HP +VKL++V E + + ++EY G ++ YL H
Sbjct: 48 TQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL-IMEYASGGEVFDYLVAHG 106
Query: 68 TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
+ E+E ARS Q+VSA++Y ++ + ++H DLK
Sbjct: 107 RMKEKE------------ARSKFRQIVSAVQYCHQKR--IVHRDLK 138
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
Query: 8 TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
T LN + RE I K L+HP +VKL++V E + + ++EY G ++ YL H
Sbjct: 51 TQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL-IMEYASGGEVFDYLVAHG 109
Query: 68 TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
+ E+E ARS Q+VSA++Y ++ + ++H DLK
Sbjct: 110 RMKEKE------------ARSKFRQIVSAVQYCHQKR--IVHRDLK 141
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 8 TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
T LN + RE I K L+HP +VKL++V E + + V+EY G ++ YL H
Sbjct: 43 TQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHG 101
Query: 68 TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
+ E+EAR + Q+VSA++Y ++ ++H DLK
Sbjct: 102 WMKEKEARAKFR------------QIVSAVQYCHQ--KFIVHRDLK 133
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 8 TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
T LN + RE I K L+HP +VKL++V E + + V+EY G ++ YL H
Sbjct: 50 TQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHG 108
Query: 68 TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
+ E+EAR + Q+VSA++Y ++ ++H DLK
Sbjct: 109 RMKEKEARAKFR------------QIVSAVQYCHQ--KFIVHRDLK 140
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 8 TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
T LN + RE I K L+HP +VKL++V E + + V+EY G ++ YL H
Sbjct: 50 TQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHG 108
Query: 68 TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
+ E+EAR + Q+VSA++Y ++ ++H DLK
Sbjct: 109 RMKEKEARAKFR------------QIVSAVQYCHQ--KFIVHRDLK 140
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 8 TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
T LN + RE I K L+HP +VKL++V E + + V+EY G ++ YL H
Sbjct: 50 TQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHG 108
Query: 68 TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
+ E+EAR + Q+VSA++Y ++ ++H DLK
Sbjct: 109 RMKEKEARAKFR------------QIVSAVQYCHQ--KFIVHRDLK 140
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 8 TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
T LN + RE I K L+HP +VKL++V E + + V+EY G ++ YL H
Sbjct: 50 TQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHG 108
Query: 68 TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
+ E+EAR + Q+VSA++Y ++ ++H DLK
Sbjct: 109 RMKEKEARAKFR------------QIVSAVQYCHQ--KFIVHRDLK 140
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 8 TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
T LN + RE I K L+HP +VKL++V E + + V+EY G ++ YL H
Sbjct: 50 TQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHG 108
Query: 68 TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
+ E+EAR + Q+VSA++Y ++ ++H DLK
Sbjct: 109 RMKEKEARAKFR------------QIVSAVQYCHQ--KFIVHRDLK 140
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 11/99 (11%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E + K+LDHP ++K+++VFE D ++ V+E C+G + L + A+ + LS+
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFE-DYHNMYIVMETCEGGE----LLERIVSAQARGKALSEG 124
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
Y++ ++ Q+++AL Y + V+H DLKP LF
Sbjct: 125 YVA----ELMKQMMNALAYFH--SQHVVHKDLKPENILF 157
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 8 TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
T LN + RE I K L+HP +VKL++V E + + V+EY G ++ YL H
Sbjct: 51 TQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHG 109
Query: 68 TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
+ E+EAR + Q+VSA++Y ++ ++H DLK
Sbjct: 110 RMKEKEARAKFR------------QIVSAVQYCHQ--KYIVHRDLK 141
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 8 TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
T LN + RE I K L+HP +VKL++V E + + V EY G ++ YL H
Sbjct: 50 TQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYL-VXEYASGGEVFDYLVAHG 108
Query: 68 TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
E+E AR+ Q+VSA++Y ++ ++H DLK
Sbjct: 109 RXKEKE------------ARAKFRQIVSAVQYCHQ--KFIVHRDLK 140
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
+E I K+LDHP +++LY+ FE D V+E C G +L F HK +
Sbjct: 72 QEIEIMKSLDHPNIIRLYETFE-DNTDIYLVMELCTGGEL-FERVVHKRV---------- 119
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
+ + A I+ V+SA+ Y +++ V H DLKP LFL
Sbjct: 120 -FRESDAARIMKDVLSAVAYCHKLN--VAHRDLKPENFLFL 157
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
+E I K+LDHP +++LY+ FE D V+E C G +L F HK +
Sbjct: 55 QEIEIMKSLDHPNIIRLYETFE-DNTDIYLVMELCTGGEL-FERVVHKRV---------- 102
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
+ + A I+ V+SA+ Y +++ V H DLKP LFL
Sbjct: 103 -FRESDAARIMKDVLSAVAYCHKLN--VAHRDLKPENFLFL 140
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 15/96 (15%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
LRE + K LDHP ++KL+++ E D++SF V E G +L + + K +E +A
Sbjct: 69 LREVELLKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEIIKRKRFSEHDA---- 123
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
AR I+ QV S + Y++ K ++H DLKP
Sbjct: 124 -------AR-IIKQVFSGITYMH--KHNIVHRDLKP 149
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 17/102 (16%)
Query: 14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAER 72
F E ++ K+LDHP ++KL+DVFE D F V E+ +G +L + + +HK
Sbjct: 89 FHEEIYNEISLLKSLDHPNIIKLFDVFE-DKKYFYLVTEFYEGGELFEQIINRHK----- 142
Query: 73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ A +I+ Q++S + YL+ K ++H D+KP
Sbjct: 143 --------FDECDAANIMKQILSGICYLH--KHNIVHRDIKP 174
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
LRE + K LDHP ++KLY+ FE D F V E G +L + K +E +A
Sbjct: 97 LREVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDA---- 151
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
AR I+ QV+S + Y+++ K ++H DLKP
Sbjct: 152 -------AR-IIRQVLSGITYMHKNK--IVHRDLKP 177
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
LRE + K LDHP ++KLY+ FE D F V E G +L + K +E +A
Sbjct: 74 LREVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDA---- 128
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
AR I+ QV+S + Y+++ K ++H DLKP
Sbjct: 129 -------AR-IIRQVLSGITYMHKNK--IVHRDLKP 154
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
LRE + K LDHP ++KLY+ FE D F V E G +L + K +E +A
Sbjct: 98 LREVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDA---- 152
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
AR I+ QV+S + Y+++ K ++H DLKP
Sbjct: 153 -------AR-IIRQVLSGITYMHKNK--IVHRDLKP 178
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 15/96 (15%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
LRE + K LDHP ++KL+++ E D++SF V E G +L + + K +E +A
Sbjct: 69 LREVELLKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEIIKRKRFSEHDA---- 123
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
AR I+ QV S + Y++ K ++H DLKP
Sbjct: 124 -------AR-IIKQVFSGITYMH--KHNIVHRDLKP 149
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 15/96 (15%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
LRE + K LDHP ++KL+++ E D++SF V E G +L + + K +E +A
Sbjct: 69 LREVELLKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEIIKRKRFSEHDA---- 123
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
AR I+ QV S + Y++ K ++H DLKP
Sbjct: 124 -------AR-IIKQVFSGITYMH--KHNIVHRDLKP 149
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E +I + DHP +VKL D F + N+ ++E+C G +D + + L +P
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYE-NNLWILIEFCAGGAVDAVMLE-----------LERP 131
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
+ + + Q + AL YL++ K +IH DLK G LF
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILF 168
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E +I + DHP +VKL D F + N+ ++E+C G +D + + L +P
Sbjct: 57 EIDILASCDHPNIVKLLDAFYYE-NNLWILIEFCAGGAVDAVMLE-----------LERP 104
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
+ + + Q + AL YL++ K +IH DLK G LF
Sbjct: 105 LTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILF 141
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E +I + DHP +VKL D F + N+ ++E+C G +D + + L +P
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYE-NNLWILIEFCAGGAVDAVMLE-----------LERP 131
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
+ + + Q + AL YL++ K +IH DLK G LF
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILF 168
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E +I + DHP +VKL D F + N+ ++E+C G +D + + L +P
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYE-NNLWILIEFCAGGAVDAVMLE-----------LERP 131
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
+ + + Q + AL YL++ K +IH DLK G LF
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILF 168
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
LRE + K LDHP ++KLY+ FE D F V E G +L + K +E +A
Sbjct: 80 LREVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDA---- 134
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
AR I+ QV+S + Y++ K ++H DLKP
Sbjct: 135 -------AR-IIRQVLSGITYMH--KNKIVHRDLKP 160
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L E + K LDHP ++KLYD FE N + + Y G D + + K
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK----------- 132
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ A I+ QV+S + YL+ K ++H DLKP
Sbjct: 133 --FNEVDAAVIIKQVLSGVTYLH--KHNIVHRDLKP 164
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE + + L HP ++KLYDV + + V+EY G++L Y+ Q ++E+EAR Q
Sbjct: 53 REISYLRLLRHPHIIKLYDVIK-SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQ 110
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Q++SA++Y + K ++H DLKP
Sbjct: 111 ------------QIISAVEYCHRHK--IVHRDLKP 131
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE + + L HP ++KLYDV + + V+EY G++L Y+ Q ++E+EAR Q
Sbjct: 63 REISYLRLLRHPHIIKLYDVIK-SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQ 120
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Q++SA++Y + K ++H DLKP
Sbjct: 121 ------------QIISAVEYCHRHK--IVHRDLKP 141
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE + + L HP ++KLYDV + + V+EY G++L Y+ Q ++E+EAR Q
Sbjct: 62 REISYLRLLRHPHIIKLYDVIK-SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQ 119
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Q++SA++Y + K ++H DLKP
Sbjct: 120 ------------QIISAVEYCHRHK--IVHRDLKP 140
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE + + L HP ++KLYDV + + V+EY G++L Y+ Q ++E+EAR Q
Sbjct: 57 REISYLRLLRHPHIIKLYDVIK-SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQ 114
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Q++SA++Y + K ++H DLKP
Sbjct: 115 ------------QIISAVEYCHRHK--IVHRDLKP 135
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
LRE + K LDHP + KLY+ FE D F V E G +L + K +E +A
Sbjct: 74 LREVQLLKQLDHPNIXKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDA---- 128
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
AR I+ QV+S + Y ++ K ++H DLKP
Sbjct: 129 -------AR-IIRQVLSGITYXHKNK--IVHRDLKP 154
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE K HP ++KLY V + F V+EY G +L Y+ +H + E EAR L Q
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTD-FFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ 118
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Q++SA+ Y + + V+H DLKP
Sbjct: 119 ------------QILSAVDYCH--RHMVVHRDLKP 139
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE K HP ++KLY V + F V+EY G +L Y+ +H + E EAR L Q
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTD-FFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ 118
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Q++SA+ Y + + V+H DLKP
Sbjct: 119 ------------QILSAVDYCH--RHMVVHRDLKP 139
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I + + HP ++ L+DV+E + +LE G +L +L Q ++++E E
Sbjct: 64 REVSILRQVLHPNIITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEE------ 116
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A S + Q++ + YL+ K + H+DLKP + L
Sbjct: 117 ------ATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLL 149
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L E + K LDHP ++KLY+ FE N + + Y G D + L
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII-------------LR 98
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Q + A I+ QV+S YL+ K ++H DLKP
Sbjct: 99 QKFSEVDAAVIMKQVLSGTTYLH--KHNIVHRDLKP 132
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E IH L HP +++LY+ FE D+N VLE C +++ YLK +P
Sbjct: 61 EVKIHCQLKHPSILELYNYFE-DSNYVYLVLEMCHNGEMNRYLKNR-----------VKP 108
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ AR + Q+++ + YL+ ++H DL
Sbjct: 109 FSENEARHFMHQIITGMLYLHS--HGILHRDL 138
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE NI + + HP ++ L+D+FE + +LE G +L +L + +++ E E
Sbjct: 57 REVNILREIRHPNIITLHDIFE-NKTDVVLILELVSGGELFDFLAEKESLTEDE------ 109
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A + Q++ + YL+ + + H+DLKP + L
Sbjct: 110 ------ATQFLKQILDGVHYLHSKR--IAHFDLKPENIMLL 142
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE NI + + HP ++ L+D+FE + +LE G +L +L + +++ E E
Sbjct: 64 REVNILREIRHPNIITLHDIFE-NKTDVVLILELVSGGELFDFLAEKESLTEDE------ 116
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A + Q++ + YL+ + + H+DLKP + L
Sbjct: 117 ------ATQFLKQILDGVHYLHSKR--IAHFDLKPENIMLL 149
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L E + K LDHP ++KLY+ FE N + + Y G D + L
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII-------------LR 115
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Q + A I+ QV+S YL+ K ++H DLKP
Sbjct: 116 QKFSEVDAAVIMKQVLSGTTYLH--KHNIVHRDLKP 149
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE NI + + HP ++ L+D+FE + +LE G +L +L + +++ E E
Sbjct: 78 REVNILREIRHPNIITLHDIFE-NKTDVVLILELVSGGELFDFLAEKESLTEDE------ 130
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A + Q++ + YL+ + + H+DLKP + L
Sbjct: 131 ------ATQFLKQILDGVHYLHSKR--IAHFDLKPENIMLL 163
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E IHK+LD+P VV + FE D + VLE C L K+ K + E EAR +
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFE-DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR- 149
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
Q + ++YL+ + VIH DLK G LFL
Sbjct: 150 -----------QTIQGVQYLHNNR--VIHRDLKLGN-LFL 175
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E IHK+LD+P VV + FE D + VLE C L K+ K + E EAR +
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFE-DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR- 149
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
Q + ++YL+ + VIH DLK G LFL
Sbjct: 150 -----------QTIQGVQYLHNNR--VIHRDLKLGN-LFL 175
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E IHK+LD+P VV + FE D + VLE C L K+ K + E EAR +
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFE-DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR- 149
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
Q + ++YL+ + VIH DLK G LFL
Sbjct: 150 -----------QTIQGVQYLHNNR--VIHRDLKLGN-LFL 175
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E IHK+LD+P VV + FE D + VLE C L K+ K + E EAR +
Sbjct: 76 EIAIHKSLDNPHVVGFHGFFE-DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR- 133
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
Q + ++YL+ + VIH DLK G LFL
Sbjct: 134 -----------QTIQGVQYLHNNR--VIHRDLKLGN-LFL 159
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 16/99 (16%)
Query: 21 EYNIHKALDHPRVVKLYDVFE----IDANSF-CTVLEYCDGHDLDFYLKQHKTIAEREAR 75
E I K L+HP VV +V + + N +EYC+G DL YL Q + +
Sbjct: 63 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK-- 120
Query: 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
R+++ + SAL+YL+E + +IH DLKP
Sbjct: 121 -------EGPIRTLLSDISSALRYLHENR--IIHRDLKP 150
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 16/99 (16%)
Query: 21 EYNIHKALDHPRVVKLYDVFE----IDANSF-CTVLEYCDGHDLDFYLKQHKTIAEREAR 75
E I K L+HP VV +V + + N +EYC+G DL YL Q + +
Sbjct: 62 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK-- 119
Query: 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
R+++ + SAL+YL+E + +IH DLKP
Sbjct: 120 -------EGPIRTLLSDISSALRYLHENR--IIHRDLKP 149
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE + K L HP ++KLYDV + V+EY G D Y+ + K + E E R Q
Sbjct: 58 REISYLKLLRHPHIIKLYDVITTPTD-IVMVIEYAGGELFD-YIVEKKRMTEDEGRRFFQ 115
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Q++ A++Y + K ++H DLKP
Sbjct: 116 ------------QIICAIEYCHRHK--IVHRDLKP 136
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I + + H V+ L+DV+E + +LE G +L +L Q ++++E E
Sbjct: 64 REVSILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEE------ 116
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A S + Q++ + YL+ K + H+DLKP + L
Sbjct: 117 ------ATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLL 149
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I + + H V+ L+DV+E + +LE G +L +L Q ++++E E
Sbjct: 64 REVSILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEE------ 116
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A S + Q++ + YL+ K + H+DLKP + L
Sbjct: 117 ------ATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLL 149
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I + + H V+ L+DV+E + +LE G +L +L Q ++++E E
Sbjct: 64 REVSILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEE------ 116
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A S + Q++ + YL+ K + H+DLKP + L
Sbjct: 117 ------ATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLL 149
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E E
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A + Q+++ + YL+ ++ + H+DLKP + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 26 KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTS 85
K L H + +LY V E AN VLEYC G +L Y+ ++E E R
Sbjct: 63 KNLRHQHICQLYHVLET-ANKIFMVLEYCPGGELFDYIISQDRLSEEETRV--------- 112
Query: 86 ARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
+ Q+VSA+ Y++ H DLKP LF
Sbjct: 113 ---VFRQIVSAVAYVHS--QGYAHRDLKPENLLF 141
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I + + H V+ L+DV+E + +LE G +L +L Q ++++E E
Sbjct: 64 REVSILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEE------ 116
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A S + Q++ + YL+ K + H+DLKP + L
Sbjct: 117 ------ATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLL 149
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E E
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A + Q+++ + YL+ ++ + H+DLKP + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E E
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A + Q+++ + YL+ ++ + H+DLKP + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E E
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A + Q+++ + YL+ ++ + H+DLKP + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E E
Sbjct: 62 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 114
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A + Q+++ + YL+ ++ + H+DLKP + L
Sbjct: 115 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 147
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E E
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A + Q+++ + YL+ ++ + H+DLKP + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E E
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A + Q+++ + YL+ ++ + H+DLKP + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E E
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A + Q+++ + YL+ ++ + H+DLKP + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I + + H V+ L+DV+E + +LE G +L +L Q ++++E E
Sbjct: 64 REVSILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEE------ 116
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A S + Q++ + YL+ K + H+DLKP + L
Sbjct: 117 ------ATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLL 149
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E E
Sbjct: 62 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 114
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A + Q+++ + YL+ ++ + H+DLKP + L
Sbjct: 115 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 147
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E E
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A + Q+++ + YL+ ++ + H+DLKP + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E E
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A + Q+++ + YL+ ++ + H+DLKP + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E E
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A + Q+++ + YL+ ++ + H+DLKP + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I K + HP V+ L++V+E + +LE G +L +L + +++ E E
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A + Q+++ + YL+ ++ + H+DLKP + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 15/90 (16%)
Query: 30 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSI 89
HP +VKL++VF ++F V+E +G +L +K+ K +E T A I
Sbjct: 65 HPNIVKLHEVFHDQLHTFL-VMELLNGGELFERIKKKKHFSE------------TEASYI 111
Query: 90 VMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
+ ++VSA+ +++++ V+H DLKP LF
Sbjct: 112 MRKLVSAVSHMHDV--GVVHRDLKPENLLF 139
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE K HP ++KLY V ++ F V+EY G +L Y+ ++ + E+E+R L Q
Sbjct: 65 REIQNLKLFRHPHIIKLYQVISTPSDIF-MVMEYVSGGELFDYICKNGRLDEKESRRLFQ 123
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Q++S + Y + + V+H DLKP
Sbjct: 124 ------------QILSGVDYCH--RHMVVHRDLKP 144
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 53 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 106
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 107 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 135
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 78 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 131
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 132 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 160
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 54 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 107
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 108 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 136
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 75 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 128
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 129 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 157
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 81 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 134
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 135 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 163
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 75 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 128
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 129 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 157
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 78 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 131
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 132 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 160
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 78 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 131
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 132 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 160
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 60 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 113
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 114 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 142
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 76 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 129
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 130 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 158
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 76 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 129
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 130 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 158
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 56 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 109
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 110 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 138
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 76 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 129
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 130 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 158
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 55 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 108
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 109 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 137
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 78 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 131
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 132 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 160
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 79 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 132
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 133 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 161
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 76 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 129
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 130 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 158
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 78 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 131
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 132 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 160
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 79 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 132
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 133 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 161
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 18/96 (18%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E ++ LDH +++LYD FE N V+EY DG +L R + +
Sbjct: 136 EISVMNQLDHANLIQLYDAFE-SKNDIVLVMEYVDGGEL-------------FDRIIDES 181
Query: 81 YLSTSARSIVM--QVVSALKYLNEIKPPVIHYDLKP 114
Y T +I+ Q+ +++++++ ++H DLKP
Sbjct: 182 YNLTELDTILFMKQICEGIRHMHQMY--ILHLDLKP 215
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 19/101 (18%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLD----FYLKQHKTIAEREA 74
++E ++ K L+HP V+K Y F I+ N VLE D DL + KQ + I ER
Sbjct: 80 IKEIDLLKQLNHPNVIKYYASF-IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPER-- 136
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
+ +Q+ SAL++++ + V+H D+KP
Sbjct: 137 ----------TVWKYFVQLCSALEHMHSRR--VMHRDIKPA 165
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 29/114 (25%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFE-------------IDANSFCTVLEYCDGHDLDFY 62
+HALRE I + LDH +VK++++ + NS V EY + DL
Sbjct: 53 KHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANV 111
Query: 63 LKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGK 116
L+Q P L AR + Q++ LKY++ V+H DLKP
Sbjct: 112 LEQ-------------GPLLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPAN 150
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y +L Y+++ + E
Sbjct: 83 YVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 136
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 137 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 165
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE +I K + HP V+ L++V+E + + E G +L +L + +++ E E
Sbjct: 63 REVSILKEIQHPNVITLHEVYE-NKTDVILIGELVAGGELFDFLAEKESLTEEE------ 115
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
A + Q+++ + YL+ ++ + H+DLKP + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 26 KALDHPRVVKLYDVFEIDANSF-CTVL--EYCDGHDLDFYLKQHKTIAEREARCLSQPYL 82
K L HP +V+ YD +E C VL E L YLK+ K + + L
Sbjct: 80 KGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVX---KIKVL----- 131
Query: 83 STSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
RS Q++ L++L+ PP+IH DLK
Sbjct: 132 ----RSWCRQILKGLQFLHTRTPPIIHRDLK 158
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 39.7 bits (91), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E + + HP + L F+ + C V+EY +G +L F+L + + +E AR
Sbjct: 194 HTLTENRVLQNSRHPFLTALKYSFQTH-DRLCFVMEYANGGELFFHLSRERVFSEDRARF 252
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
++VSAL YL+ K V++ DLK
Sbjct: 253 YGA------------EIVSALDYLHSEK-NVVYRDLK 276
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 39.7 bits (91), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E + + HP + L F+ + C V+EY +G +L F+L + + +E AR
Sbjct: 197 HTLTENRVLQNSRHPFLTALKYSFQTH-DRLCFVMEYANGGELFFHLSRERVFSEDRARF 255
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
++VSAL YL+ K V++ DLK
Sbjct: 256 YGA------------EIVSALDYLHSEK-NVVYRDLK 279
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 38.5 bits (88), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L H +V+LYDV + N V E+ D +DL Y+ +T+
Sbjct: 47 PSTAIREISLMKELKHENIVRLYDVIHTE-NKLTLVFEFMD-NDLKKYMDS-RTVGN-TP 102
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
R L + + Q++ L + +E K ++H DLKP
Sbjct: 103 RGLELNLV----KYFQWQLLQGLAFCHENK--ILHRDLKP 136
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 16/115 (13%)
Query: 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDL 59
M KL+ + +RE + + P +V Y F D S C +E+ DG L
Sbjct: 44 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC--MEHMDGGSL 101
Query: 60 DFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
D LK+ K I E L + + + V+ L YL E K ++H D+KP
Sbjct: 102 DQVLKEAKRIPE---EILGK---------VSIAVLRGLAYLRE-KHQIMHRDVKP 143
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 28 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTS-A 86
++HP +VKLY N C V+EY +G L L + + PY + + A
Sbjct: 59 VNHPNIVKLYGAC---LNPVCLVMEYAEGGSLYNVLHGAEPL----------PYYTAAHA 105
Query: 87 RSIVMQVVSALKYLNEIKP-PVIHYDLKP 114
S +Q + YL+ ++P +IH DLKP
Sbjct: 106 MSWCLQCSQGVAYLHSMQPKALIHRDLKP 134
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 28 LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTS-A 86
++HP +VKLY N C V+EY +G L L + + PY + + A
Sbjct: 58 VNHPNIVKLYGAC---LNPVCLVMEYAEGGSLYNVLHGAEPL----------PYYTAAHA 104
Query: 87 RSIVMQVVSALKYLNEIKP-PVIHYDLKP 114
S +Q + YL+ ++P +IH DLKP
Sbjct: 105 MSWCLQCSQGVAYLHSMQPKALIHRDLKP 133
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ RE ++ LDHP VKLY F+ D + L Y L Y+++ + E
Sbjct: 78 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGCLLKYIRKIGSFDE----- 131
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
T R ++VSAL+YL+ +IH DLKP
Sbjct: 132 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 160
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E + K + H +V L D++E + V++ G +L I ER
Sbjct: 56 EIAVLKKIKHENIVTLEDIYE-STTHYYLVMQLVSGGEL------FDRILERGV------ 102
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
Y A ++ QV+SA+KYL+E ++H DLKP L+L
Sbjct: 103 YTEKDASLVIQQVLSAVKYLHE--NGIVHRDLKPENLLYL 140
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 21 EYNIHKALDHPRVVKLYD-VFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
E N+ + L HP +V+ YD + + + V+EYC+G DL + T +E + L +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI----TKGTKERQYLDE 110
Query: 80 PYLSTSARSIVMQVVSALK---YLNEIKPPVIHYDLKP 114
++ ++ Q+ ALK ++ V+H DLKP
Sbjct: 111 EFVL----RVMTQLTLALKECHRRSDGGHTVLHRDLKP 144
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 21 EYNIHKALDHPRVVKLYD-VFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
E N+ + L HP +V+ YD + + + V+EYC+G DL + T +E + L +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI----TKGTKERQYLDE 110
Query: 80 PYLSTSARSIVMQVVSALK---YLNEIKPPVIHYDLKP 114
++ ++ Q+ ALK ++ V+H DLKP
Sbjct: 111 EFVL----RVMTQLTLALKECHRRSDGGHTVLHRDLKP 144
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E +IH++L H VV + FE D + VLE C L K+ K + E EAR
Sbjct: 71 EISIHRSLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRKALTEPEARY---- 125
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
YL Q+V +YL+ + VIH DLK G LFL
Sbjct: 126 YLR--------QIVLGCQYLHRNR--VIHRDLKLGN-LFL 154
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E +IH++L H VV + FE D + VLE C L K+ K + E EAR
Sbjct: 67 EISIHRSLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRKALTEPEARY---- 121
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
YL Q+V +YL+ + VIH DLK G LFL
Sbjct: 122 YLR--------QIVLGCQYLHRNR--VIHRDLKLGN-LFL 150
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 23/128 (17%)
Query: 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLD 60
+ K+L N + R L E+N+ K ++HP V+KLY D ++EY L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG-PLLLIVEYAKYGSLR 114
Query: 61 FYLKQHKTIAER----------------EARCLSQPYLSTSARSIVMQVVSALKYLNEIK 104
+L++ + + + R L+ L S Q+ ++YL E+K
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLI----SFAWQISQGMQYLAEMK 170
Query: 105 PPVIHYDL 112
++H DL
Sbjct: 171 --LVHRDL 176
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E +IH++L H VV + FE D + VLE C L K+ K + E EAR
Sbjct: 65 EISIHRSLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRKALTEPEARY---- 119
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
YL Q+V +YL+ + VIH DLK G LFL
Sbjct: 120 YLR--------QIVLGCQYLHRNR--VIHRDLKLGN-LFL 148
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 23/128 (17%)
Query: 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLD 60
+ K+L N + R L E+N+ K ++HP V+KLY D ++EY L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG-PLLLIVEYAKYGSLR 114
Query: 61 FYLKQHKTIAER----------------EARCLSQPYLSTSARSIVMQVVSALKYLNEIK 104
+L++ + + + R L+ L S Q+ ++YL E+K
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLI----SFAWQISQGMQYLAEMK 170
Query: 105 PPVIHYDL 112
++H DL
Sbjct: 171 --LVHRDL 176
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E +IH++L H VV + FE D + VLE C L K+ K + E EAR
Sbjct: 67 EISIHRSLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRKALTEPEARY---- 121
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
YL Q+V +YL+ + VIH DLK G LFL
Sbjct: 122 YLR--------QIVLGCQYLHRNR--VIHRDLKLGN-LFL 150
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E +IH++L H VV + FE D + VLE C L K+ K + E EAR
Sbjct: 91 EISIHRSLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRKALTEPEARY---- 145
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
YL Q+V +YL+ + VIH DLK G LFL
Sbjct: 146 YLR--------QIVLGCQYLHRNR--VIHRDLKLGN-LFL 174
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E +IH++L H VV + FE D + VLE C L K+ K + E EAR
Sbjct: 89 EISIHRSLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRKALTEPEARY---- 143
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
YL Q+V +YL+ + VIH DLK G LFL
Sbjct: 144 YLR--------QIVLGCQYLHRNR--VIHRDLKLGN-LFL 172
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
P +RE +I K L H +VKLYDV V E+ D DL L + E
Sbjct: 43 IPSTTIREISILKELKHSNIVKLYDVIHT-KKRLVLVFEHLD-QDLKKLLDVCEGGLE-- 98
Query: 74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S +A+S ++Q+++ + Y ++ + V+H DLKP
Sbjct: 99 ---------SVTAKSFLLQLLNGIAYCHDRR--VLHRDLKP 128
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 21 EYNIHKALDHPRVVKLYD-VFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
E N+ + L HP +V+ YD + + + V+EYC+G DL + T +E + L +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI----TKGTKERQYLDE 110
Query: 80 PYLSTSARSIVMQVVSALK---YLNEIKPPVIHYDLKP 114
++ ++ Q+ ALK ++ V+H DLKP
Sbjct: 111 EFVL----RVMTQLTLALKECHRRSDGGHTVLHRDLKP 144
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
P +RE +I K L H +VKLYDV V E+ D DL L + E
Sbjct: 43 IPSTTIREISILKELKHSNIVKLYDVIHT-KKRLVLVFEHLD-QDLKKLLDVCEGGLE-- 98
Query: 74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S +A+S ++Q+++ + Y ++ + V+H DLKP
Sbjct: 99 ---------SVTAKSFLLQLLNGIAYCHDRR--VLHRDLKP 128
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
P +RE +I K L H +VKLYDV V E+ D DL L + E
Sbjct: 43 IPSTTIREISILKELKHSNIVKLYDVIHT-KKRLVLVFEHLD-QDLKKLLDVCEGGLE-- 98
Query: 74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S +A+S ++Q+++ + Y ++ + V+H DLKP
Sbjct: 99 ---------SVTAKSFLLQLLNGIAYCHDRR--VLHRDLKP 128
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E + + HP + L F+ + C V+EY +G +L F+L + + +E AR
Sbjct: 54 HTLTENRVLQNSRHPFLTALKYSFQT-HDRLCFVMEYANGGELFFHLSRERVFSEDRARF 112
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
++VSAL YL+ K V++ DLK
Sbjct: 113 YG------------AEIVSALDYLHSEK-NVVYRDLK 136
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E + + HP + L F+ + C V+EY +G +L F+L + + +E AR
Sbjct: 55 HTLTENRVLQNSRHPFLTALKYSFQTH-DRLCFVMEYANGGELFFHLSRERVFSEDRARF 113
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
++VSAL YL+ K V++ DLK
Sbjct: 114 YG------------AEIVSALDYLHSEK-NVVYRDLK 137
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E + + HP + L F+ + C V+EY +G +L F+L + + +E AR
Sbjct: 56 HTLTENRVLQNSRHPFLTALKYSFQT-HDRLCFVMEYANGGELFFHLSRERVFSEDRARF 114
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
++VSAL YL+ K V++ DLK
Sbjct: 115 YG------------AEIVSALDYLHSEK-NVVYRDLK 138
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L+ R R
Sbjct: 108 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLR-------RIGR- 158
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 159 FSEPH----ARFYAAQIVLTFEYLHSLD--LIYRDLKP 190
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L+ R R
Sbjct: 108 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVPGGEMFSHLR-------RIGR- 158
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 159 FSEPH----ARFYAAQIVLTFEYLHSLD--LIYRDLKP 190
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 14 FPRHALREYNIHKALDHPRVVKLYDVFEIDAN-----SFCTVLEYCDGHDLDFYLKQHKT 68
F + A RE + K + H V+ L DVF D F V+ + G DL +K K
Sbjct: 67 FAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKL 125
Query: 69 IAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
+R + +V Q++ L+Y++ +IH DLKPG
Sbjct: 126 GEDR-------------IQFLVYQMLKGLRYIH--AAGIIHRDLKPG 157
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + VLEY G ++ +L R
Sbjct: 88 HTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYM-VLEYAPGGEMFSHL--------RRIGR 138
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 139 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 170
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 15/97 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H + E + + HP + L F+ + C V+EY +G +L F+L + + E AR
Sbjct: 54 HTVTESRVLQNTRHPFLTALKYAFQTH-DRLCFVMEYANGGELFFHLSRERVFTEERARF 112
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
++VSAL+YL+ V++ D+K
Sbjct: 113 YG------------AEIVSALEYLH--SRDVVYRDIK 135
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 15/97 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H + E + + HP + L F+ + C V+EY +G +L F+L + + E AR
Sbjct: 51 HTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFVMEYANGGELFFHLSRERVFTEERARF 109
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
++VSAL+YL+ V++ D+K
Sbjct: 110 YGA------------EIVSALEYLH--SRDVVYRDIK 132
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 15/97 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H + E + + HP + L F+ + C V+EY +G +L F+L + + E AR
Sbjct: 51 HTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFVMEYANGGELFFHLSRERVFTEERARF 109
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
++VSAL+YL+ V++ D+K
Sbjct: 110 YG------------AEIVSALEYLH--SRDVVYRDIK 132
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 15/97 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H + E + + HP + L F+ + C V+EY +G +L F+L + + E AR
Sbjct: 51 HTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFVMEYANGGELFFHLSRERVFTEERARF 109
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
++VSAL+YL+ V++ D+K
Sbjct: 110 YG------------AEIVSALEYLH--SRDVVYRDIK 132
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 15/97 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H + E + + HP + L F+ + C V+EY +G +L F+L + + E AR
Sbjct: 51 HTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFVMEYANGGELFFHLSRERVFTEERARF 109
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
++VSAL+YL+ V++ D+K
Sbjct: 110 YG------------AEIVSALEYLH--SRDVVYRDIK 132
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P ALRE + K L H +V+L+DV D V E+CD DL Y + E
Sbjct: 45 PSSALREICLLKELKHKNIVRLHDVLHSD-KKLTLVFEFCD-QDLKKYFDSCNGDLDPEI 102
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+S + Q++ L + + V+H DLKP
Sbjct: 103 -----------VKSFLFQLLKGLGFCHSRN--VLHRDLKP 129
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E I K L+HP ++K+ + F DA + VLE +G +L + +K + +EA C
Sbjct: 65 EIEILKKLNHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRL--KEATCKLYF 120
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Y Q++ A++YL+E +IH DLKP
Sbjct: 121 Y----------QMLLAVQYLHE--NGIIHRDLKP 142
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E I K L+HP ++K+ + F DA + VLE +G +L + +K + +EA C
Sbjct: 65 EIEILKKLNHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRL--KEATCKLYF 120
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Y Q++ A++YL+E +IH DLKP
Sbjct: 121 Y----------QMLLAVQYLHE--NGIIHRDLKP 142
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E I K L+HP ++K+ + F DA + VLE +G +L + +K + +EA C
Sbjct: 71 EIEILKKLNHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRL--KEATCKLYF 126
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Y Q++ A++YL+E +IH DLKP
Sbjct: 127 Y----------QMLLAVQYLHE--NGIIHRDLKP 148
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P ALRE + K L H +V+L+DV D V E+CD DL Y + E
Sbjct: 45 PSSALREICLLKELKHKNIVRLHDVLHSD-KKLTLVFEFCD-QDLKKYFDSCNGDLDPEI 102
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+S + Q++ L + + V+H DLKP
Sbjct: 103 -----------VKSFLFQLLKGLGFCHSRN--VLHRDLKP 129
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E I K L+HP ++K+ + F DA + VLE +G +L + +K + +EA C
Sbjct: 64 EIEILKKLNHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRL--KEATCKLYF 119
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Y Q++ A++YL+E +IH DLKP
Sbjct: 120 Y----------QMLLAVQYLHE--NGIIHRDLKP 141
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ D DL ++ +A
Sbjct: 49 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEHVD-QDLKKFM---------DA 97
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 98 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 134
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E I DHP +VKL + D ++E+C G +D + + R L++P
Sbjct: 58 EIEILATCDHPYIVKLLGAYYHDGK-LWIMIEFCPGGAVDAIMLELD-------RGLTEP 109
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
+ R Q++ AL +L+ + +IH DLK G L
Sbjct: 110 QIQVVCR----QMLEALNFLHSKR--IIHRDLKAGNVLM 142
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 15/97 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H + E + + HP + L F+ + C V+EY +G +L F+L + + E AR
Sbjct: 56 HTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFVMEYANGGELFFHLSRERVFTEERARF 114
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
++VSAL+YL+ V++ D+K
Sbjct: 115 YGA------------EIVSALEYLH--SRDVVYRDIK 137
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 23/128 (17%)
Query: 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLD 60
+ K+L N + R L E+N+ K ++HP V+KLY D ++EY L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG-PLLLIVEYAKYGSLR 114
Query: 61 FYLKQHKTIAER----------------EARCLSQPYLSTSARSIVMQVVSALKYLNEIK 104
+L++ + + + R L+ L S Q+ ++YL E+
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLI----SFAWQISQGMQYLAEMS 170
Query: 105 PPVIHYDL 112
++H DL
Sbjct: 171 --LVHRDL 176
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 35.8 bits (81), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E I K L+HP ++K+ + F DA + VLE +G +L + +K + +EA C
Sbjct: 65 EIEILKKLNHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRL--KEATCKLYF 120
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Y Q++ A++YL+E +IH DLKP
Sbjct: 121 Y----------QMLLAVQYLHE--NGIIHRDLKP 142
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 35.8 bits (81), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E I DHP +VKL + D ++E+C G +D + + R L++P
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGK-LWIMIEFCPGGAVDAIMLELD-------RGLTEP 117
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
+ R Q++ AL +L+ + +IH DLK G L
Sbjct: 118 QIQVVCR----QMLEALNFLHSKR--IIHRDLKAGNVLM 150
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 15/97 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H + E + + HP + L F+ + C V+EY +G +L F+L + + E AR
Sbjct: 51 HTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFVMEYANGGELFFHLSRERVFTEERARF 109
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
++VSAL+YL+ V++ D+K
Sbjct: 110 YG------------AEIVSALEYLH--SRDVVYRDIK 132
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 15/99 (15%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E + L HP ++KL ++FE VLE G +L + + +ER+
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFET-PTEISLVLELVTGGELFDRIVEKGYYSERD------- 149
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
A V Q++ A+ YL+E ++H DLKP L+
Sbjct: 150 -----AADAVKQILEAVAYLHE--NGIVHRDLKPENLLY 181
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E I K L+HP ++K+ + F DA + VLE +G +L + +K + +EA C
Sbjct: 204 EIEILKKLNHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRL--KEATCKLYF 259
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Y Q++ A++YL+E +IH DLKP
Sbjct: 260 Y----------QMLLAVQYLHE--NGIIHRDLKP 281
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE + + HP +V+ + FE + S V++YC+G DL + K + +E + L
Sbjct: 72 REVAVLANMKHPNIVQYRESFE-ENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW 130
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
+Q+ ALK++++ K ++H D+K
Sbjct: 131 ----------FVQICLALKHVHDRK--ILHRDIK 152
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 35.8 bits (81), Expect = 0.007, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 16/101 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARCLS 78
+E L HP +V L+D FE D N + E+ G +L + +H ++E E
Sbjct: 203 KEIQTMSVLRHPTLVNLHDAFE-DDNEMVMIYEFMSGGELFEKVADEHNKMSEDE----- 256
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
A + QV L +++E +H DLKP +F
Sbjct: 257 -------AVEYMRQVCKGLCHMHENN--YVHLDLKPENIMF 288
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E I K L+HP ++K+ + F DA + VLE +G +L + +K + +EA C
Sbjct: 190 EIEILKKLNHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRL--KEATC---- 241
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ Q++ A++YL+E +IH DLKP
Sbjct: 242 ------KLYFYQMLLAVQYLHE--NGIIHRDLKP 267
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G D+ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYMPGGDMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G D+ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYMPGGDMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 21/110 (19%)
Query: 10 LNLPFP--RHALR-EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH 66
+N P+P ++ ++ E +I L HP+++ L+D FE D +LE+ G +L
Sbjct: 84 INTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE-DKYEMVLILEFLSGGEL------- 135
Query: 67 KTIAEREARCLSQPYLSTSARSI--VMQVVSALKYLNEIKPPVIHYDLKP 114
R ++ Y + A I + Q LK+++E ++H D+KP
Sbjct: 136 ------FDRIAAEDYKMSEAEVINYMRQACEGLKHMHE--HSIVHLDIKP 177
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 35.4 bits (80), Expect = 0.009, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR
Sbjct: 108 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFXEPHARF 166
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ Q+V +YL+ + +I+ DLKP
Sbjct: 167 YAA------------QIVLTFEYLHSLD--LIYRDLKP 190
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 35.0 bits (79), Expect = 0.010, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++
Sbjct: 418 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDK------ 469
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ +V QV +KYL E +H DL
Sbjct: 470 ------NIIELVHQVSMGMKYLEESN--FVHRDL 495
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 35.0 bits (79), Expect = 0.010, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++
Sbjct: 419 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDK------ 470
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ +V QV +KYL E +H DL
Sbjct: 471 ------NIIELVHQVSMGMKYLEESN--FVHRDL 496
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 35.0 bits (79), Expect = 0.011, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 16/101 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARCLS 78
+E L HP +V L+D FE D N + E+ G +L + +H ++E E
Sbjct: 97 KEIQTMSVLRHPTLVNLHDAFE-DDNEMVMIYEFMSGGELFEKVADEHNKMSEDE----- 150
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
A + QV L +++E +H DLKP +F
Sbjct: 151 -------AVEYMRQVCKGLCHMHENN--YVHLDLKPENIMF 182
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 34.7 bits (78), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 38/98 (38%), Gaps = 16/98 (16%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER---EAR 75
LRE I K L HP +V N V EY L Y HK+ A E R
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPN-LSIVTEYLSRGSL--YRLLHKSGAREQLDERR 138
Query: 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
LS Y V + YL+ PP++H DLK
Sbjct: 139 RLSMAY----------DVAKGMNYLHNRNPPIVHRDLK 166
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++
Sbjct: 54 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDK------ 105
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ +V QV +KYL E +H DL
Sbjct: 106 ------NIIELVHQVSMGMKYLEE--SNFVHRDL 131
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++
Sbjct: 60 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDK------ 111
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ +V QV +KYL E +H DL
Sbjct: 112 ------NIIELVHQVSMGMKYLEE--SNFVHRDL 137
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++
Sbjct: 66 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDK------ 117
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ +V QV +KYL E +H DL
Sbjct: 118 ------NIIELVHQVSMGMKYLEE--SNFVHRDL 143
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++
Sbjct: 60 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDK------ 111
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ +V QV +KYL E +H DL
Sbjct: 112 ------NIIELVHQVSMGMKYLEE--SNFVHRDL 137
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++
Sbjct: 56 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDK------ 107
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ +V QV +KYL E +H DL
Sbjct: 108 ------NIIELVHQVSMGMKYLEE--SNFVHRDL 133
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++
Sbjct: 74 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDK------ 125
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ +V QV +KYL E +H DL
Sbjct: 126 ------NIIELVHQVSMGMKYLEESN--FVHRDL 151
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 21/100 (21%)
Query: 18 ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDG---HDLDFYLKQHKTIAEREA 74
ALRE + K L HP +V L +VF V EYCD H+LD Y + + E
Sbjct: 49 ALREIRMLKQLKHPNLVNLLEVFR-RKRRLHLVFEYCDHTVLHELDRY---QRGVPEH-- 102
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+SI Q + A+ + + K IH D+KP
Sbjct: 103 ----------LVKSITWQTLQAVNFCH--KHNCIHRDVKP 130
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 37/130 (28%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYC-DGHDLDFYLKQHKTIAEREARCLSQ 79
E + K L HP + +LY+V+E D C V+E C GH LD K + I + +C
Sbjct: 78 EVRLMKKLHHPNIARLYEVYE-DEQYICLVMELCHGGHLLD---KLNVFIDDSTGKCAMD 133
Query: 80 ---------PYLSTSA---------------------RSIVMQVVSALKYLNEIKPPVIH 109
P + A +I+ Q+ SAL YL+ + H
Sbjct: 134 VVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH--NQGICH 191
Query: 110 YDLKPGKPLF 119
D+KP LF
Sbjct: 192 RDIKPENFLF 201
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++
Sbjct: 76 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDK------ 127
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ +V QV +KYL E +H DL
Sbjct: 128 ------NIIELVHQVSMGMKYLEE--SNFVHRDL 153
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L E N+ + LD+P +V++ + E A S+ V+E + L+ YL+Q++ + ++
Sbjct: 76 LAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDK------ 127
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ +V QV +KYL E +H DL
Sbjct: 128 ------NIIELVHQVSMGMKYLEE--SNFVHRDL 153
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L++ AE AR
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFAEPHARF 145
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ Q+V +YL+ + +I+ DLKP
Sbjct: 146 YA------------AQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYAPGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHL--------RRIGR 138
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 139 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 170
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYAPGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYAPGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYAPGGEMFSHL--------RRIGR 138
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 139 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 170
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DF +A
Sbjct: 49 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLSMDLKDFM----------DA 97
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 98 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 134
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYAPGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 74 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHL--------RRIGR 124
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 125 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 156
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DF +A
Sbjct: 48 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLSMDLKDFM----------DA 96
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 97 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 133
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE H++L HP +V+ +V + V+EY G +L + +E EAR Q
Sbjct: 64 REIINHRSLRHPNIVRFKEVI-LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 80 PYLSTSARSIVMQV 93
+S + + MQV
Sbjct: 123 QLISGVSYAHAMQV 136
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 16/96 (16%)
Query: 24 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLS 83
+HK + HP +V L D++E + + +++ G +L + + ER+A L
Sbjct: 70 LHK-IKHPNIVALDDIYESGGHLYL-IMQLVSGGELFDRIVEKGFYTERDASRL------ 121
Query: 84 TSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
+ QV+ A+KYL+++ ++H DLKP L+
Sbjct: 122 ------IFQVLDAVKYLHDLG--IVHRDLKPENLLY 149
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHL--------RRIGR 138
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 139 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 170
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHL--------RRIGR 138
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 139 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 170
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 16/96 (16%)
Query: 24 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLS 83
+HK + HP +V L D++E + + +++ G +L + + ER+A L
Sbjct: 70 LHK-IKHPNIVALDDIYESGGHLYL-IMQLVSGGELFDRIVEKGFYTERDASRL------ 121
Query: 84 TSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
+ QV+ A+KYL+++ ++H DLKP L+
Sbjct: 122 ------IFQVLDAVKYLHDL--GIVHRDLKPENLLY 149
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHL--------RRIGR 138
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 139 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 170
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHL--------RRIGR 138
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 139 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 170
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHL--------RRIGR 138
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 139 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 170
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEYSFKDNSNLYM-VMEYVPGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 73 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHL--------RRIGR 123
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 124 FSEPH----ARFYAAQIVLTFEYLHSLD--LIYRDLKP 155
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 16/96 (16%)
Query: 24 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLS 83
+HK + HP +V L D++E + + +++ G +L + + ER+A L
Sbjct: 70 LHK-IKHPNIVALDDIYESGGHLYL-IMQLVSGGELFDRIVEKGFYTERDASRL------ 121
Query: 84 TSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
+ QV+ A+KYL+++ ++H DLKP L+
Sbjct: 122 ------IFQVLDAVKYLHDL--GIVHRDLKPENLLY 149
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 49 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKTFM---------DA 97
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 98 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 134
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEYSFKDNSNLYM-VMEYVPGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 80 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHL--------RRIGR 130
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 131 FSEPH----ARFYAAQIVLTFEYLHSLD--LIYRDLKP 162
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEYSFKDNSNLYM-VMEYVPGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHL--------RRIGR 137
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
S+P+ AR Q+V +YL+ + +I+ DLKP
Sbjct: 138 FSEPH----ARFYAAQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 16/96 (16%)
Query: 24 IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLS 83
+HK + HP +V L D++E + + +++ G +L + + ER+A L
Sbjct: 70 LHK-IKHPNIVALDDIYESGGHLYL-IMQLVSGGELFDRIVEKGFYTERDASRL------ 121
Query: 84 TSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
+ QV+ A+KYL+++ ++H DLKP L+
Sbjct: 122 ------IFQVLDAVKYLHDLG--IVHRDLKPENLLY 149
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DF +A
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKDFM----------DA 94
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 95 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 131
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 33.9 bits (76), Expect = 0.025, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
F + A RE + K + H V+ L DVF A+S DFYL + +
Sbjct: 84 FAKRAYRELLLLKHMQHENVIGLLDVF-TPASSLRNFY--------DFYLVMPFMQTDLQ 134
Query: 74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
+ + + + +V Q++ LKY++ V+H DLKPG
Sbjct: 135 -KIMGMEFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPG 173
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP ++++Y+ F D +LE+ +L L++H E+ + +
Sbjct: 63 REIEIQSHLRHPNILRMYNYFH-DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME 121
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
++ AL Y +E K VIH D+KP
Sbjct: 122 ------------ELADALHYCHERK--VIHRDIKP 142
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP ++++Y+ F D +LE+ +L L++H E+ + +
Sbjct: 64 REIEIQSHLRHPNILRMYNYFH-DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME 122
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
++ AL Y +E K VIH D+KP
Sbjct: 123 ------------ELADALHYCHERK--VIHRDIKP 143
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 94
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 95 SALTGIPLPL-IKSYLFQLLQGLSFCHSHR--VLHRDLKP 131
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 33.5 bits (75), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 16/100 (16%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCD-GHDLDFYLKQHKTIAERE 73
P L E I K L H ++V+LY V + V EY + G LDF + + E
Sbjct: 48 PESFLEEAQIMKKLKHDKLVQLYAV--VSEEPIYIVTEYMNKGSLLDF-------LKDGE 98
Query: 74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
R L P L A QV + + Y+ + IH DL+
Sbjct: 99 GRALKLPNLVDMA----AQVAAGMAYIERMN--YIHRDLR 132
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 33.5 bits (75), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP ++++Y+ F D +LE+ +L L++H E+ + +
Sbjct: 63 REIEIQSHLRHPNILRMYNYFH-DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME 121
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
++ AL Y +E K VIH D+KP
Sbjct: 122 ------------ELADALHYCHERK--VIHRDIKP 142
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 33.5 bits (75), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 53 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 101
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 102 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 138
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 33.5 bits (75), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 53 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 101
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 102 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 138
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 33.5 bits (75), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 49 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 97
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 98 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 134
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 50 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 98
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 99 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 135
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 94
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 95 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 131
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 47 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 95
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 96 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 132
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 48 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 96
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 97 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 133
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 47 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 95
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 96 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 132
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEHVH-QDLKTFM---------DA 93
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 94 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 130
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 48 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 96
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 97 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 133
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 94
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 95 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 131
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 94
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 95 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 131
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 94
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 95 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 131
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 93
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 94 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 130
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 94
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 95 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 131
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 49 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 97
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 98 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 134
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 48 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 96
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 97 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 133
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 93
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 94 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 130
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 33.5 bits (75), Expect = 0.031, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 24/120 (20%)
Query: 4 KLLTTNLNLPF-----PRHALREYNIHKALDHPRVVKLYDVF----EIDANSFCTVLEYC 54
K+ L+ PF R RE + K L H V+ L DVF I+ S ++
Sbjct: 55 KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTL 114
Query: 55 DGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
G DL+ +K SQ + +V Q++ LKY++ +IH DLKP
Sbjct: 115 MGADLNNIVK-------------SQALSDEHVQFLVYQLLRGLKYIHSAG--IIHRDLKP 159
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 47 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 95
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 96 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 132
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 94
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 95 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 131
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 93
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 94 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 130
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 94
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 95 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 131
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 47 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 95
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 96 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 132
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 93
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 94 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 130
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 49 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLS-MDLKKFM---------DA 97
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 98 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 134
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 47 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLS-MDLKKFM---------DA 95
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 96 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 132
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 94
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 95 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 131
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 93
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 94 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 130
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L+HP +VKL DV + N V E+ DL ++ +A
Sbjct: 50 PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLH-QDLKKFM---------DA 98
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
L+ L +S + Q++ L + + + V+H DLKP
Sbjct: 99 SALTGIPLPL-IKSYLFQLLQGLAFCHSHR--VLHRDLKP 135
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 38/98 (38%), Gaps = 16/98 (16%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER---EAR 75
LRE I K L HP +V N V EY L Y HK+ A E R
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPN-LSIVTEYLSRGSL--YRLLHKSGAREQLDERR 138
Query: 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
LS Y V + YL+ PP++H +LK
Sbjct: 139 RLSMAY----------DVAKGMNYLHNRNPPIVHRNLK 166
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 30 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSI 89
HP ++ L DV++ D V E G +L + + K +EREA ++
Sbjct: 75 HPNIITLKDVYD-DGKYVYVVTELMKGGELLDKILRQKFFSEREAS------------AV 121
Query: 90 VMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
+ + ++YL+ V+H DLKP L++
Sbjct: 122 LFTITKTVEYLH--AQGVVHRDLKPSNILYV 150
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE H++L HP +V+ +V + V+EY G +L + +E EAR Q
Sbjct: 64 REIINHRSLRHPNIVRFKEVI-LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 80 PYLSTSARSIVMQV 93
+S + MQV
Sbjct: 123 QLISGVSYCHAMQV 136
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE H++L HP +V+ +V + V+EY G +L + +E EAR Q
Sbjct: 64 REIINHRSLRHPNIVRFKEVI-LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 80 PYLSTSARSIVMQV 93
+S + MQV
Sbjct: 123 QLISGVSYCHAMQV 136
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE H++L HP +V+ +V + V+EY G +L + +E EAR Q
Sbjct: 63 REIINHRSLRHPNIVRFKEVI-LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 121
Query: 80 PYLSTSARSIVMQV 93
+S + MQV
Sbjct: 122 QLISGVSYCHAMQV 135
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE H++L HP +V+ +V + V+EY G +L + +E EAR Q
Sbjct: 64 REIINHRSLRHPNIVRFKEVI-LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 80 PYLSTSARSIVMQV 93
+S + MQV
Sbjct: 123 QLISGVSYCHAMQV 136
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L H +V L+D+ + S V EY D DL YL I
Sbjct: 44 PCTAIREVSLLKDLKHANIVTLHDIIHTE-KSLTLVFEYLD-KDLKQYLDDCGNIINMH- 100
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + Q++ L Y + K V+H DLKP
Sbjct: 101 ----------NVKLFLFQLLRGLAYCHRQK--VLHRDLKP 128
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 32.7 bits (73), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 30 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSI 89
HP ++ L DV++ D V E G +L + + K +EREA ++
Sbjct: 75 HPNIITLKDVYD-DGKYVYVVTELXKGGELLDKILRQKFFSEREAS------------AV 121
Query: 90 VMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
+ + ++YL+ V+H DLKP L++
Sbjct: 122 LFTITKTVEYLH--AQGVVHRDLKPSNILYV 150
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 32.7 bits (73), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 18 ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
A RE + + L HP V+ L VF A+ +L HDL +K H+ ++ + +
Sbjct: 65 ACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRA-SKANKKPV 123
Query: 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
P +S++ Q++ + YL+ V+H DLKP L +
Sbjct: 124 QLP--RGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVM 162
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 16/105 (15%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCD-GHDLDFYLKQHKTIAEREA 74
+ ++E +I + D P VVK Y + V+EYC G D ++KT+ E E
Sbjct: 69 QEIIKEISIMQQCDSPHVVKYYGSY-FKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDE- 126
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
+I+ + L+YL+ ++ IH D+K G L
Sbjct: 127 -----------IATILQSTLKGLEYLHFMRK--IHRDIKAGNILL 158
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 11/99 (11%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
+ RE + K + H V+ L DVF + LE + D YL H A+
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVF-----TPARSLEEFN----DVYLVTHLMGADLNNI 116
Query: 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
SQ + ++ Q++ LKY++ +IH DLKP
Sbjct: 117 VKSQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKP 153
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 32.3 bits (72), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
R L E +I DHP +++L V + V EY + LD +L++H
Sbjct: 79 RDFLGEASIMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSLDSFLRKHDA------- 130
Query: 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ ++ + S +KYL+++ +H DL
Sbjct: 131 ----QFTVIQLVGMLRGIASGMKYLSDMG--YVHRDL 161
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 32.3 bits (72), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFXEPHARF 145
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ Q+V +YL+ + +I+ DLKP
Sbjct: 146 YA------------AQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYAPGGEMFSHLRRIGRFXEPHARF 145
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ Q+V +YL+ + +I+ DLKP
Sbjct: 146 YA------------AQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFXEPHARF 145
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ Q+V +YL+ + +I+ DLKP
Sbjct: 146 YA------------AQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFXEPHARF 145
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ Q+V +YL+ + +I+ DLKP
Sbjct: 146 YA------------AQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L+HP +VKLY + N V+E+ DL H+ + + +
Sbjct: 72 REVFIMSNLNHPNIVKLYGLMH---NPPRMVMEFVPCGDL-----YHRLLDK------AH 117
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
P + +++ + ++Y+ PP++H DL+
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLR 151
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR
Sbjct: 82 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFXEPHARF 140
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ Q+V +YL+ + +I+ DLKP
Sbjct: 141 YA------------AQIVLTFEYLHSL--DLIYRDLKP 164
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
F + A RE + K + H V+ L DVF A+S DFYL + +
Sbjct: 66 FAKRAYRELLLLKHMQHENVIGLLDVF-TPASSLRNFY--------DFYLVMPFMQTDLQ 116
Query: 74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
+ + + + +V Q++ LKY++ V+H DLKPG
Sbjct: 117 -KIMGLKFSEEKIQYLVYQMLKGLKYIHS--AGVVHRDLKPG 155
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
R ALRE + + L HP ++ L D F +N V ++ + DL+ +K + +
Sbjct: 57 RTALREIKLLQELSHPNIIGLLDAFGHKSN-ISLVFDFME-TDLEVIIKDNSLV------ 108
Query: 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ ++ ++ + L+YL++ ++H DLKP
Sbjct: 109 -----LTPSHIKAYMLMTLQGLEYLHQHW--ILHRDLKP 140
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
R L E +I DHP +++L V + V EY + LD +L++H
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSLDSFLRKHDA------- 113
Query: 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ ++ + S +KYL+++ +H DL
Sbjct: 114 ----QFTVIQLVGMLRGIASGMKYLSDMG--YVHRDL 144
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFXEPHARF 145
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ Q+V +YL+ + +I+ DLKP
Sbjct: 146 YA------------AQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR
Sbjct: 80 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFXEPHARF 138
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ Q+V +YL+ + +I+ DLKP
Sbjct: 139 YA------------AQIVLTFEYLHSLD--LIYRDLKP 162
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 32.3 bits (72), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L+HP +VKLY + N V+E+ DL H+ + + +
Sbjct: 72 REVFIMSNLNHPNIVKLYGLMH---NPPRMVMEFVPCGDL-----YHRLLDK------AH 117
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
P + +++ + ++Y+ PP++H DL+
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLR 151
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 32.3 bits (72), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L+HP +VKLY + N V+E+ DL H+ + + +
Sbjct: 72 REVFIMSNLNHPNIVKLYGLMH---NPPRMVMEFVPCGDL-----YHRLLDK------AH 117
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
P + +++ + ++Y+ PP++H DL+
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLR 151
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 32.3 bits (72), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFXEPHARF 146
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ Q+V +YL+ + +I+ DLKP
Sbjct: 147 YA------------AQIVLTFEYLHSL--DLIYRDLKP 170
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.3 bits (72), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 15/98 (15%)
Query: 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
H L E I +A++ P +VKL F+ ++N + V+EY G ++ +L++ E AR
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-VMEYVPGGEMFSHLRRIGRFXEPHARF 145
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ Q+V +YL+ + +I+ DLKP
Sbjct: 146 YA------------AQIVLTFEYLHSL--DLIYRDLKP 169
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
Query: 5 LLTTNLNLPFPRHALR-EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
L T L H LR E I L HP +++LY F DA +LEY
Sbjct: 45 LFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-------- 95
Query: 64 KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
RE + LS+ + + + ++ +AL Y + + VIH D+KP
Sbjct: 96 ---LGTVYRELQKLSR-FDEQRTATYITELANALSYCHSKR--VIHRDIKP 140
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 32.0 bits (71), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY+ F D +LEY +L L++ T E+
Sbjct: 72 REIEIQAHLHHPNILRLYNYF-YDRRRIYLILEYAPRGELYKELQKSCTFDEQR------ 124
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+I+ ++ AL Y + K VIH D+KP
Sbjct: 125 ------TATIMEELADALMYCHGKK--VIHRDIKP 151
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 32.0 bits (71), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
Query: 5 LLTTNLNLPFPRHALR-EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
L T L H LR E I L HP +++LY F DA +LEY
Sbjct: 45 LFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-------- 95
Query: 64 KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
RE + LS+ + + + ++ +AL Y + + VIH D+KP
Sbjct: 96 ---LGTVYRELQKLSR-FDEQRTATYITELANALSYCHSKR--VIHRDIKP 140
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 32.0 bits (71), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 17/97 (17%)
Query: 24 IHKALDHPRVVKLYDVFEIDANS-------FCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
+ K HP +V+ I F + E C G ++F K E+R
Sbjct: 79 MKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKM-------ESRG 131
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
P + I Q A+++++ KPP+IH DLK
Sbjct: 132 ---PLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLK 165
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 32.0 bits (71), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE H++L HP +V+ +V + ++EY G +L + +E EAR Q
Sbjct: 65 REIINHRSLRHPNIVRFKEVI-LTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQ 123
Query: 80 PYLSTSARSIVMQV 93
LS + MQ+
Sbjct: 124 QLLSGVSYCHSMQI 137
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 31.6 bits (70), Expect = 0.10, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 24/120 (20%)
Query: 4 KLLTTNLNLPF-----PRHALREYNIHKALDHPRVVKLYDVF----EIDANSFCTVLEYC 54
K+ L+ PF R RE + K L H V+ L DVF I+ S ++
Sbjct: 55 KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTL 114
Query: 55 DGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
G DL+ +K + LS ++ + +V Q++ LKY++ +IH DLKP
Sbjct: 115 MGADLNNIVK---------CQALSDEHV----QFLVYQLLRGLKYIHSAG--IIHRDLKP 159
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L +R
Sbjct: 49 PENIKKEIXINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL----------FDRIE 97
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ P A+ Q+++ + YL+ I + H D+KP
Sbjct: 98 PDIGMP--EPDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 133
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
+ E + L HP++V+LY V ++ C V E+ + L YL+ + +
Sbjct: 50 IEEAEVMMKLSHPKLVQLYGVC-LEQAPICLVFEFMEHGCLSDYLRTQRGL--------- 99
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ + + + + V + YL E VIH DL
Sbjct: 100 --FAAETLLGMCLDVCEGMAYLEE--ASVIHRDL 129
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L +R
Sbjct: 48 PENIKKEIXINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL----------FDRIE 96
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ P A+ Q+++ + YL+ I + H D+KP
Sbjct: 97 PDIGMP--EPDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 132
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L +R
Sbjct: 48 PENIKKEIXINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL----------FDRIE 96
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ P A+ Q+++ + YL+ I + H D+KP
Sbjct: 97 PDIGMP--EPDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 132
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 14 FPRHALREYNIHKALD---HPRVVKLYDVFEIDANSFCT----VLEYCDGHDLDFYLKQH 66
P +RE + + L+ HP VV+L+DV + T V E+ D DL YL +
Sbjct: 54 MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDK- 111
Query: 67 KTIAEREARCLSQPYLST-SARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ +P + T + + ++ Q++ L +L+ + V+H DLKP
Sbjct: 112 ----------VPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKP 148
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 17/103 (16%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFC---TVLEYCDGHDLDFYLKQHKTIAEREARC 76
RE AL+HP +V +YD E + + V+EY DG L + I E
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL-------RDIVHTEG-- 111
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
P A ++ AL + ++ +IH D+KP L
Sbjct: 112 ---PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANILI 149
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 14 FPRHALREYNIHKALD---HPRVVKLYDVFEIDANSFCT----VLEYCDGHDLDFYLKQH 66
P +RE + + L+ HP VV+L+DV + T V E+ D DL YL +
Sbjct: 54 MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDK- 111
Query: 67 KTIAEREARCLSQPYLST-SARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ +P + T + + ++ Q++ L +L+ + V+H DLKP
Sbjct: 112 ----------VPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKP 148
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 14 FPRHALREYNIHKALD---HPRVVKLYDVFEIDANSFCT----VLEYCDGHDLDFYLKQH 66
P +RE + + L+ HP VV+L+DV + T V E+ D DL YL +
Sbjct: 54 MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDK- 111
Query: 67 KTIAEREARCLSQPYLST-SARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ +P + T + + ++ Q++ L +L+ + V+H DLKP
Sbjct: 112 ----------VPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKP 148
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 17/98 (17%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFC---TVLEYCDGHDLDFYLKQHKTIAEREARC 76
RE AL+HP +V +YD E + + V+EY DG L + I E
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL-------RDIVHTEG-- 111
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
P A ++ AL + ++ +IH D+KP
Sbjct: 112 ---PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKP 144
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 17/98 (17%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFC---TVLEYCDGHDLDFYLKQHKTIAEREARC 76
RE AL+HP +V +YD E + + V+EY DG L + I E
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL-------RDIVHTEG-- 111
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
P A ++ AL + ++ +IH D+KP
Sbjct: 112 ---PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKP 144
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 24/120 (20%)
Query: 4 KLLTTNLNLPF-----PRHALREYNIHKALDHPRVVKLYDVF----EIDANSFCTVLEYC 54
K+ L+ PF R RE + K L H V+ L DVF I+ S ++
Sbjct: 47 KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTL 106
Query: 55 DGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
G DL+ +K + LS ++ + +V Q++ LKY++ +IH DLKP
Sbjct: 107 MGADLNNIVK---------CQALSDEHV----QFLVYQLLRGLKYIH--SAGIIHRDLKP 151
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 17/98 (17%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFC---TVLEYCDGHDLDFYLKQHKTIAEREARC 76
RE AL+HP +V +YD E + + V+EY DG L + I E
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL-------RDIVHTEG-- 111
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
P A ++ AL + ++ +IH D+KP
Sbjct: 112 ---PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKP 144
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 57 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 104
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 105 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 136
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 17/98 (17%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFC---TVLEYCDGHDLDFYLKQHKTIAEREARC 76
RE AL+HP +V +YD E + + V+EY DG L + I E
Sbjct: 78 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL-------RDIVHTEG-- 128
Query: 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
P A ++ AL + ++ +IH D+KP
Sbjct: 129 ---PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKP 161
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 60 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 107
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 108 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 139
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 61 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 108
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 109 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 140
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 57 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 104
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 105 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 136
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 54 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 101
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 102 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 133
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 56 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 103
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 104 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 135
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 60 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 107
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 108 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 139
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 57 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 104
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 105 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 136
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 60 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 107
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 108 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 139
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 57 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 104
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 105 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 136
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 57 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 104
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 105 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 136
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 21/123 (17%)
Query: 4 KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-------NSFCTVLEYCDG 56
K+L N FP ALRE I + L H VV L ++ A S V ++C+
Sbjct: 50 KVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE- 108
Query: 57 HDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGK 116
HDL L + L + LS R + M +++ L Y++ K ++H D+K
Sbjct: 109 HDLAGLL----------SNVLVKFTLSEIKRVMQM-LLNGLYYIHRNK--ILHRDMKAAN 155
Query: 117 PLF 119
L
Sbjct: 156 VLI 158
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 21/123 (17%)
Query: 4 KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDAN-------SFCTVLEYCDG 56
K+L N FP ALRE I + L H VV L ++ A+ S V ++C+
Sbjct: 50 KVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCE- 108
Query: 57 HDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGK 116
HDL L + L + LS R + M +++ L Y++ K ++H D+K
Sbjct: 109 HDLAGLL----------SNVLVKFTLSEIKRVMQM-LLNGLYYIHRNK--ILHRDMKAAN 155
Query: 117 PLF 119
L
Sbjct: 156 VLI 158
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 60 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 107
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 108 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 139
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 58 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 105
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 106 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 137
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 62 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 109
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 110 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 141
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F D+ +LEY RE + LS+
Sbjct: 57 REVEIQSHLRHPNILRLYGYFH-DSTRVYLILEYAP-----------LGTVYRELQKLSK 104
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + K VIH D+KP
Sbjct: 105 -FDEQRTATYITELANALSYCHSKK--VIHRDIKP 136
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 21/123 (17%)
Query: 4 KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-------NSFCTVLEYCDG 56
K+L N FP ALRE I + L H VV L ++ A S V ++C+
Sbjct: 49 KVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE- 107
Query: 57 HDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGK 116
HDL L + L + LS R + M +++ L Y++ K ++H D+K
Sbjct: 108 HDLAGLL----------SNVLVKFTLSEIKRVMQM-LLNGLYYIHRNK--ILHRDMKAAN 154
Query: 117 PLF 119
L
Sbjct: 155 VLI 157
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 21/123 (17%)
Query: 4 KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-------NSFCTVLEYCDG 56
K+L N FP ALRE I + L H VV L ++ A S V ++C+
Sbjct: 50 KVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE- 108
Query: 57 HDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGK 116
HDL L + L + LS R + M +++ L Y++ K ++H D+K
Sbjct: 109 HDLAGLL----------SNVLVKFTLSEIKRVMQM-LLNGLYYIHRNK--ILHRDMKAAN 155
Query: 117 PLF 119
L
Sbjct: 156 VLI 158
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L ++ + E
Sbjct: 49 PENIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--- 104
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
A+ Q+++ + YL+ I + H D+KP
Sbjct: 105 ---------PDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 133
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 57 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 104
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 105 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 136
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 60 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 107
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 108 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 139
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L ++ + E
Sbjct: 48 PENIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--- 103
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
A+ Q+++ + YL+ I + H D+KP
Sbjct: 104 ---------PDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 132
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L ++ + E
Sbjct: 49 PENIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--- 104
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
A+ Q+++ + YL+ I + H D+KP
Sbjct: 105 ---------PDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 133
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L ++ + E
Sbjct: 49 PENIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--- 104
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
A+ Q+++ + YL+ I + H D+KP
Sbjct: 105 ---------PDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 133
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 30.8 bits (68), Expect = 0.21, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 19 LREYNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
+RE+ + K L+H +VKL+ + E ++E+C L T+ E +
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSL-------YTVLEEPSNAY 107
Query: 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
P + ++ VV + +L E ++H ++KPG
Sbjct: 108 GLP--ESEFLIVLRDVVGGMNHLRE--NGIVHRNIKPG 141
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 17/92 (18%)
Query: 30 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSI 89
HP ++ L DV++ D V E G +L + + K +EREA S
Sbjct: 80 HPNIITLKDVYD-DGKHVYLVTELMRGGELLDKILRQKFFSEREA-------------SF 125
Query: 90 VMQVVS-ALKYLNEIKPPVIHYDLKPGKPLFL 120
V+ + ++YL+ V+H DLKP L++
Sbjct: 126 VLHTIGKTVEYLHS--QGVVHRDLKPSNILYV 155
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 57 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 104
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 105 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 136
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L ++ + E
Sbjct: 49 PENIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--- 104
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
A+ Q+++ + YL+ I + H D+KP
Sbjct: 105 ---------PDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 133
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 62 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 109
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 110 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 141
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 59 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 106
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 107 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 138
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY ++ L++ E+
Sbjct: 62 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAPRGEVYKELQKLSKFDEQR------ 114
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + ++ +AL Y + + VIH D+KP
Sbjct: 115 ------TATYITELANALSYCHSKR--VIHRDIKP 141
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
+ E + L HP++V+LY V ++ C V E+ + L YL+ + +
Sbjct: 50 IEEAEVMMKLSHPKLVQLYGVC-LEQAPICLVFEFMEHGCLSDYLRTQRGL--------- 99
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ + + + + V + YL E VIH DL
Sbjct: 100 --FAAETLLGMCLDVCEGMAYLEE--ACVIHRDL 129
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 58 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 105
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 106 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 137
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 62 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 109
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 110 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 141
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 58 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 105
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 106 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 137
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L +R
Sbjct: 48 PENIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL----------FDRIE 96
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ P A+ Q+++ + YL+ I + H D+KP
Sbjct: 97 PDIGMP--EPDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 132
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
+ E + L HP++V+LY V ++ C V E+ + L YL+ + +
Sbjct: 48 IEEAEVMMKLSHPKLVQLYGVC-LEQAPICLVFEFMEHGCLSDYLRTQRGL--------- 97
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ + + + + V + YL E VIH DL
Sbjct: 98 --FAAETLLGMCLDVCEGMAYLEE--ACVIHRDL 127
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 59 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 106
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 107 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 138
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L +R
Sbjct: 48 PENIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL----------FDRIE 96
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ P A+ Q+++ + YL+ I + H D+KP
Sbjct: 97 PDIGMP--EPDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 132
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY ++ +E + LS+
Sbjct: 62 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAPRGEV-----------YKELQKLSK 109
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 110 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 141
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L +R
Sbjct: 48 PENIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL----------FDRIE 96
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ P A+ Q+++ + YL+ I + H D+KP
Sbjct: 97 PDIGMP--EPDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 132
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 60 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 107
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 108 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 139
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 83 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 130
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 131 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 162
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
+ E + L HP++V+LY V ++ C V E+ + L YL+ + +
Sbjct: 53 IEEAEVMMKLSHPKLVQLYGVC-LEQAPICLVFEFMEHGCLSDYLRTQRGL--------- 102
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ + + + + V + YL E VIH DL
Sbjct: 103 --FAAETLLGMCLDVCEGMAYLEE--ACVIHRDL 132
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L ++ + E
Sbjct: 48 PENIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--- 103
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
A+ Q+++ + YL+ I + H D+KP
Sbjct: 104 ---------PDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 132
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L ++ + E
Sbjct: 49 PENIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--- 104
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
A+ Q+++ + YL+ I + H D+KP
Sbjct: 105 ---------PDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 133
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 30.4 bits (67), Expect = 0.24, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
R L E +I DHP +++L V + V EY + LD +L++H
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSLDSFLRKHDA------- 142
Query: 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ ++ + S +KYL+++ +H DL
Sbjct: 143 ----QFTVIQLVGMLRGIASGMKYLSDMG--FVHRDL 173
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L ++ + E
Sbjct: 48 PENIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--- 103
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
A+ Q+++ + YL+ I + H D+KP
Sbjct: 104 ---------PDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 132
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 83 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 130
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 131 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 162
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L +R
Sbjct: 49 PENIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL----------FDRIE 97
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ P A+ Q+++ + YL+ I + H D+KP
Sbjct: 98 PDIGMP--EPDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 133
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L +R
Sbjct: 48 PENIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL----------FDRIE 96
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ P A+ Q+++ + YL+ I + H D+KP
Sbjct: 97 PDIGMP--EPDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 132
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
+ E + L HP++V+LY V ++ C V E+ + L YL+ + +
Sbjct: 70 IEEAEVMMKLSHPKLVQLYGVC-LEQAPICLVFEFMEHGCLSDYLRTQRGL--------- 119
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ + + + + V + YL E VIH DL
Sbjct: 120 --FAAETLLGMCLDVCEGMAYLEE--ACVIHRDL 149
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L +R
Sbjct: 48 PENIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL----------FDRIE 96
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ P A+ Q+++ + YL+ I + H D+KP
Sbjct: 97 PDIGMP--EPDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 132
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L +R
Sbjct: 48 PENIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL----------FDRIE 96
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ P A+ Q+++ + YL+ I + H D+KP
Sbjct: 97 PDIGMP--EPDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 132
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L ++ + E
Sbjct: 47 PENIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE--- 102
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
A+ Q+++ + YL+ I + H D+KP
Sbjct: 103 ---------PDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 131
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+K L+H VVK Y + N LEYC G +L +R
Sbjct: 48 PENIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL----------FDRIE 96
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ P A+ Q+++ + YL+ I + H D+KP
Sbjct: 97 PDIGMP--EPDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 132
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 17/92 (18%)
Query: 30 HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSI 89
HP ++ L DV++ D V E G +L + + K +EREA S
Sbjct: 80 HPNIITLKDVYD-DGKHVYLVTELMRGGELLDKILRQKFFSEREA-------------SF 125
Query: 90 VMQVVS-ALKYLNEIKPPVIHYDLKPGKPLFL 120
V+ + ++YL+ V+H DLKP L++
Sbjct: 126 VLHTIGKTVEYLH--SQGVVHRDLKPSNILYV 155
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
R L E +I DHP +++L V + V EY + LD +L++H
Sbjct: 89 RDFLGEASIMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSLDSFLRKHDA------- 140
Query: 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ ++ + S +KYL+++ +H DL
Sbjct: 141 ----QFTVIQLVGMLRGIASGMKYLSDMG--YVHRDL 171
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
R L E +I DHP +++L V + V EY + LD +L++H
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSLDSFLRKHDA------- 142
Query: 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ ++ + S +KYL+++ +H DL
Sbjct: 143 ----QFTVIQLVGMLRGIASGMKYLSDMG--YVHRDL 173
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
R L E +I DHP +++L V + V EY + LD +L++H
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSLDSFLRKHDA------- 142
Query: 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ ++ + S +KYL+++ +H DL
Sbjct: 143 ----QFTVIQLVGMLRGIASGMKYLSDMG--YVHRDL 173
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
R L E +I DHP +++L V + V EY + LD +L++H
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSLDSFLRKHDA------- 142
Query: 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ ++ + S +KYL+++ +H DL
Sbjct: 143 ----QFTVIQLVGMLRGIASGMKYLSDMG--YVHRDL 173
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
R L E +I DHP +++L V + V EY + LD +L++H
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSLDSFLRKHDA------- 142
Query: 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ ++ + S +KYL+++ +H DL
Sbjct: 143 ----QFTVIQLVGMLRGIASGMKYLSDMG--YVHRDL 173
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
R L E +I DHP +++L V + V EY + LD +L++H
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSLDSFLRKHDA------- 142
Query: 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ ++ + S +KYL+++ +H DL
Sbjct: 143 ----QFTVIQLVGMLRGIASGMKYLSDMG--YVHRDL 173
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
R L E +I DHP +++L V + V EY + LD +L++H
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSLDSFLRKHDA------- 142
Query: 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ ++ + S +KYL+++ +H DL
Sbjct: 143 ----QFTVIQLVGMLRGIASGMKYLSDMG--YVHRDL 173
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I L HP +++LY F DA +LEY RE + LS+
Sbjct: 74 REVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAP-----------LGTVYRELQKLSK 121
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ + + ++ +AL Y + + VIH D+KP
Sbjct: 122 -FDEQRTATYITELANALSYCHSKR--VIHRDIKP 153
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
+ E + L HP++V+LY V ++ C V E+ + L YL+ + +
Sbjct: 51 IEEAEVMMKLSHPKLVQLYGVC-LEQAPICLVTEFMEHGCLSDYLRTQRGL--------- 100
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ + + + + V + YL E VIH DL
Sbjct: 101 --FAAETLLGMCLDVCEGMAYLEE--ACVIHRDL 130
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSF-CTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
+RE+ + K L+H +VKL+ + E ++E+C L T+ E +
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSL-------YTVLEEPSNAY 107
Query: 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
P + ++ VV + +L E ++H ++KPG
Sbjct: 108 GLP--ESEFLIVLRDVVGGMNHLRE--NGIVHRNIKPG 141
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium
Parvum In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium
Parvum In Complex With Indirubin E804
Length = 383
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVF 40
PR+ RE +I K LDH ++KL D F
Sbjct: 44 PRYKNRELDIMKVLDHVNIIKLVDYF 69
>pdb|3NBI|A Chain A, Crystal Structure Of Human Rmi1 N-Terminus
Length = 216
Score = 29.6 bits (65), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 73 EARCLSQPYLSTSARSIVMQVVSALKYLN--EIKP-PVIHYDLKPGKPLFLFA 122
EA+ +P+ + +R + +Q+ + + E +P P++H DL PG + ++
Sbjct: 122 EAQVTPKPWEAKPSRXLXLQLTDGIVQIQGXEYQPIPILHSDLPPGTKILIYG 174
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 16/94 (17%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLE-YCDGHDLDFYLKQHKTIAEREARCLSQ 79
E I ++H ++K+ D+FE + F V+E + G DL ++ +H L +
Sbjct: 79 EIAILSRVEHANIIKVLDIFE-NQGFFQLVMEKHGSGLDLFAFIDRHPR--------LDE 129
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
P A I Q+VSA+ YL +IH D+K
Sbjct: 130 PL----ASYIFRQLVSAVGYLR--LKDIIHRDIK 157
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I + L HP +V+L+D + + + + + G +L + I RE
Sbjct: 70 REARICRLLKHPNIVRLHDSISEEGHHYL-IFDLVTGGEL------FEDIVAREY----- 117
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Y A + Q++ A+ + +++ V+H DLKP
Sbjct: 118 -YSEADASHCIQQILEAVLHCHQMG--VVHRDLKP 149
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 15/109 (13%)
Query: 4 KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
K+L +RE I LD+P +V+L V + A + V+E G L +L
Sbjct: 43 KVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ--AEALMLVMEMAGGGPLHKFL 100
Query: 64 KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ +RE +S + ++ QV +KYL E +H DL
Sbjct: 101 -----VGKREEIPVS------NVAELLHQVSMGMKYLEE--KNFVHRDL 136
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 16/98 (16%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
R L+E + + L+HP V+K V D +F T EY G L +K
Sbjct: 52 RTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT--EYIKGGTLRGIIKS--------- 100
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
+ Y + S + S + YL+ + +IH DL
Sbjct: 101 --MDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDL 134
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 28.9 bits (63), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
+RE I LD+P +V+L V + A + V+E G L +L + +RE +S
Sbjct: 384 MREAQIMHQLDNPYIVRLIGVCQ--AEALMLVMEMAGGGPLHKFL-----VGKREEIPVS 436
Query: 79 QPYLSTSARSIVMQVVSALKYLNE 102
+ ++ QV +KYL E
Sbjct: 437 ------NVAELLHQVSMGMKYLEE 454
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 28.9 bits (63), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 14/95 (14%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
+E I K LDHP VVKL +V + D N D + F L + E +
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLD-DPNE--------DHLYMVFELVNQGPVMEVPTL---K 132
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
P AR ++ ++YL+ K +IH D+KP
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKP 165
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 28.9 bits (63), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT 68
P A+RE ++ K L HP +V L DV + V E+ + DL L ++KT
Sbjct: 62 IPSTAIREISLLKELHHPNIVSLIDVIHSE-RCLTLVFEFME-KDLKKVLDENKT 114
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 28.9 bits (63), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT 68
P A+RE ++ K L HP +V L DV + V E+ + DL L ++KT
Sbjct: 62 IPSTAIREISLLKELHHPNIVSLIDVIHSE-RCLTLVFEFME-KDLKKVLDENKT 114
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 28.5 bits (62), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 15/100 (15%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P + +E I+ L+H VVK Y + N LEYC G +L +R
Sbjct: 49 PENIKKEICINAMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL----------FDRIE 97
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+ P A+ Q+++ + YL+ I + H D+KP
Sbjct: 98 PDIGMP--EPDAQRFFHQLMAGVVYLHGIG--ITHRDIKP 133
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH 66
R L E +I DHP V+ L V + + E+ + LD +L+Q+
Sbjct: 79 RDFLSEASIMGQFDHPNVIHLEGVV-TKSTPVMIITEFMENGSLDSFLRQN 128
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH 66
R L E +I DHP V+ L V + + E+ + LD +L+Q+
Sbjct: 53 RDFLSEASIMGQFDHPNVIHLEGVV-TKSTPVMIITEFMENGSLDSFLRQN 102
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
L+E + DHP +VKL V I N ++E C +L +L+ K
Sbjct: 59 LQEALTMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRK 105
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
L+E + DHP +VKL V I N ++E C +L +L+ K
Sbjct: 59 LQEALTMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRK 105
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
L+E + DHP +VKL V I N ++E C +L +L+ K
Sbjct: 87 LQEALTMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRK 133
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
L+E + DHP +VKL V I N ++E C +L +L+ K
Sbjct: 59 LQEALTMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRK 105
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
L+E + DHP +VKL V I N ++E C +L +L+ K
Sbjct: 64 LQEALTMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRK 110
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I + L HP +V+L+D + + + + + G +L + I RE
Sbjct: 59 REARICRLLKHPNIVRLHDSISEEGHHYL-IFDLVTGGEL------FEDIVAREY----- 106
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Y A + Q++ A+ + +++ V+H +LKP
Sbjct: 107 -YSEADASHCIQQILEAVLHCHQMG--VVHRNLKP 138
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
L+E + DHP +VKL V I N ++E C +L +L+ K
Sbjct: 59 LQEALTMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRK 105
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
L+E + DHP +VKL V I N ++E C +L +L+ K
Sbjct: 62 LQEALTMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRK 108
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI 69
P L E N+ K L H R+V+LY V + + EY + L +LK I
Sbjct: 61 PDAFLAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGI 113
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
L+E + DHP +VKL V I N ++E C +L +L+ K
Sbjct: 56 LQEALTMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRK 102
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
L+E + DHP +VKL V I N ++E C +L +L+ K
Sbjct: 61 LQEALTMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRK 107
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI 69
P L E N+ K L H R+V+LY V + + EY + L +LK I
Sbjct: 48 PDAFLAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGI 100
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI 69
P L E N+ K L H R+V+LY V + + EY + L +LK I
Sbjct: 60 PDAFLAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGI 112
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 15/94 (15%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E +I ++HP +VKL+ F+ + + +L++ G DL L + E + +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYL-ILDFLRGGDLFTRLSKEVMFTEEDVKF---- 130
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
YL+ ++ AL +L+ + +I+ DLKP
Sbjct: 131 YLA--------ELALALDHLHSL--GIIYRDLKP 154
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI 69
P L E N+ K L H R+V+LY V + + EY + L +LK I
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGI 104
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 15/94 (15%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E +I ++HP +VKL+ F+ + + +L++ G DL L + E + +
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGKLYL-ILDFLRGGDLFTRLSKEVMFTEEDVKF---- 131
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
YL+ ++ AL +L+ + +I+ DLKP
Sbjct: 132 YLA--------ELALALDHLHSL--GIIYRDLKP 155
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 13/94 (13%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L+E + K + HP +V+L V ++ F V EY +L YL++ E +
Sbjct: 76 LKEAAVMKEIKHPNLVQLLGVCTLEP-PFYIVTEYMPYGNLLDYLRE---CNREEVTAVV 131
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
Y++T Q+ SA++YL K IH DL
Sbjct: 132 LLYMAT-------QISSAMEYLE--KKNFIHRDL 156
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI 69
P L E N+ K L H R+V+LY V + + EY + L +LK I
Sbjct: 58 PDAFLAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGI 110
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI 69
P L E N+ K L H R+V+LY V + + EY + L +LK I
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGI 104
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI 69
P L E N+ K L H R+V+LY V + + EY + L +LK I
Sbjct: 54 PDAFLAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGI 106
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI 69
P L E N+ K L H R+V+LY V + + EY + L +LK I
Sbjct: 58 PDAFLAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGI 110
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI 69
P L E N+ K L H R+V+LY V + + EY + L +LK I
Sbjct: 57 PDAFLAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGI 109
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI 69
P L E N+ K L H R+V+LY V + + EY + L +LK I
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGI 104
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI 69
P L E N+ K L H R+V+LY V + + EY + L +LK I
Sbjct: 53 PDAFLAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGI 105
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI 69
P L E N+ K L H R+V+LY V + + EY + L +LK I
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGI 104
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 15/94 (15%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E +I ++HP +VKL+ F+ + + +L++ G DL L + E + +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYL-ILDFLRGGDLFTRLSKEVMFTEEDVKF---- 130
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
YL+ ++ AL +L+ + +I+ DLKP
Sbjct: 131 YLA--------ELALALDHLHSLG--IIYRDLKP 154
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI 69
P L E N+ K L H R+V+LY V + + EY + L +LK I
Sbjct: 62 PDAFLAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGI 114
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 26.9 bits (58), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI 69
P L E N+ K L H R+V+LY V + + EY + L +LK I
Sbjct: 47 PDAFLAEANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGI 99
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
L+E + DHP +VKL V I N ++E C +L +L+ K
Sbjct: 439 LQEALTMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRK 485
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I + L HP +V+L+D + ++ + V + G +L + I RE
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEESFHYL-VFDLVTGGEL------FEDIVAREF----- 124
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Y A + Q++ ++ Y + ++H +LKP
Sbjct: 125 -YSEADASHCIQQILESIAYCHS--NGIVHRNLKP 156
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
L+E + DHP +VKL V I N ++E C +L +L+ K
Sbjct: 439 LQEALTMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRK 485
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I + L HP +V+L+D + ++ + V + G +L + I RE
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYL-VFDLVTGGEL------FEDIVAREF----- 101
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Y A + Q++ ++ Y + ++H +LKP
Sbjct: 102 -YSEADASHCIQQILESIAYCH--SNGIVHRNLKP 133
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I + L HP +V+L+D + ++ + V + G +L + I RE
Sbjct: 53 REARICRKLQHPNIVRLHDSIQEESFHYL-VFDLVTGGEL------FEDIVAREF----- 100
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Y A + Q++ ++ Y + ++H +LKP
Sbjct: 101 -YSEADASHCIQQILESIAYCH--SNGIVHRNLKP 132
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I + L HP +V+L+D + ++ + V + G +L + I RE
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYL-VFDLVTGGEL------FEDIVAREF----- 101
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Y A + Q++ ++ Y + ++H +LKP
Sbjct: 102 -YSEADASHCIQQILESIAYCH--SNGIVHRNLKP 133
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I + L HP +V+L+D + + V + G +L + I RE
Sbjct: 79 REARICRLLKHPNIVRLHDSISEEGFHYL-VFDLVTGGEL------FEDIVAREY----- 126
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Y A + Q++ ++ ++++ ++H DLKP
Sbjct: 127 -YSEADASHCIHQILESVNHIHQ--HDIVHRDLKP 158
>pdb|1VI2|A Chain A, Crystal Structure Of Shikimate-5-Dehydrogenase With Nad
pdb|1VI2|B Chain B, Crystal Structure Of Shikimate-5-Dehydrogenase With Nad
Length = 300
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLE 52
RH+L +KAL+ + Y FE+D +SF +E
Sbjct: 20 RHSLSPEXQNKALEKAGLPFTYXAFEVDNDSFPGAIE 56
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 15/94 (15%)
Query: 21 EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
E +I ++HP VVKL+ F+ + + +L++ G DL L + E + +
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYL-ILDFLRGGDLFTRLSKEVMFTEEDVKF---- 134
Query: 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
YL+ ++ L +L+ + +I+ DLKP
Sbjct: 135 YLA--------ELALGLDHLHSL--GIIYRDLKP 158
>pdb|1NPD|A Chain A, X-Ray Structure Of Shikimate Dehydrogenase Complexed
With Nad+ From E.Coli (Ydib) Northeast Structural
Genomics Research Consortium (Nesg) Target Er24
pdb|1NPD|B Chain B, X-Ray Structure Of Shikimate Dehydrogenase Complexed
With Nad+ From E.Coli (Ydib) Northeast Structural
Genomics Research Consortium (Nesg) Target Er24
pdb|1O9B|A Chain A, QuinateSHIKIMATE DEHYDROGENASE YDIB COMPLEXED WITH NADH
pdb|1O9B|B Chain B, QuinateSHIKIMATE DEHYDROGENASE YDIB COMPLEXED WITH NADH
Length = 288
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLE 52
RH+L +KAL+ + Y FE+D +SF +E
Sbjct: 18 RHSLSPEXQNKALEKAGLPFTYXAFEVDNDSFPGAIE 54
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT 68
+ E I K LDHP +VKL + E + ++E +L YL+++K
Sbjct: 73 MSEAVIMKNLDHPHIVKLIGIIEEEPTWI--IMELYPYGELGHYLERNKN 120
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
+ E I K LDHP +VKL + E + ++E +L YL+++K S
Sbjct: 61 MSEAVIMKNLDHPHIVKLIGIIEEEPTWI--IMELYPYGELGHYLERNKN---------S 109
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
L+ S +Q+ A+ YL I +H D+
Sbjct: 110 LKVLTLVLYS--LQICKAMAYLESIN--CVHRDI 139
>pdb|3T4E|A Chain A, 1.95 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase (Aroe) From Salmonella Enterica Subsp.
Enterica Serovar Typhimurium In Complex With Nad
pdb|3T4E|B Chain B, 1.95 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase (Aroe) From Salmonella Enterica Subsp.
Enterica Serovar Typhimurium In Complex With Nad
Length = 312
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 12 LPFP-RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLE 52
+ +P RH+L +KAL+ + Y FE+D +F + +E
Sbjct: 37 MAYPIRHSLSPEMQNKALEKAGLPYTYMAFEVDNTTFASAIE 78
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 13/94 (13%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L+E + K + HP +V+L V + F ++E+ +L YL++ C
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRE----------CNR 103
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
Q + + Q+ SA++YL K IH DL
Sbjct: 104 QEVSAVVLLYMATQISSAMEYLE--KKNFIHRDL 135
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 25.8 bits (55), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
+ E I K LDHP +VKL + E + ++E +L YL+++K S
Sbjct: 57 MSEAVIMKNLDHPHIVKLIGIIEEEPTWI--IMELYPYGELGHYLERNKN---------S 105
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
L+ S +Q+ A+ YL I +H D+
Sbjct: 106 LKVLTLVLYS--LQICKAMAYLESIN--CVHRDI 135
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 19/97 (19%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I + L HP +V+L+D + + V + G +L + I RE
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYL-VFDLVTGGEL------FEDIVAREY----- 99
Query: 80 PYLSTSARSIVMQVVSALK--YLNEIKPPVIHYDLKP 114
Y A + Q++ ++ +LN I +H DLKP
Sbjct: 100 -YSEADASHCIQQILESVNHCHLNGI----VHRDLKP 131
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 13/94 (13%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L+E + K + HP +V+L V + F ++E+ +L YL++ C
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRE----------CNR 105
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
Q + + Q+ SA++YL K IH DL
Sbjct: 106 QEVSAVVLLYMATQISSAMEYLE--KKNFIHRDL 137
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 25.8 bits (55), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 13/94 (13%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L+E + K + HP +V+L V + F ++E+ +L YL++ C
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRE----------CNR 105
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
Q + + Q+ SA++YL K IH DL
Sbjct: 106 QEVSAVVLLYMATQISSAMEYLE--KKNFIHRDL 137
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 19/97 (19%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I + L HP +V+L+D + + V + G +L + I RE
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYL-VFDLVTGGEL------FEDIVAREY----- 99
Query: 80 PYLSTSARSIVMQVVSALK--YLNEIKPPVIHYDLKP 114
Y A + Q++ ++ +LN I +H DLKP
Sbjct: 100 -YSEADASHCIQQILESVNHCHLNGI----VHRDLKP 131
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L+E + K + HP +V+L V + F ++E+ +L YL++ +E +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRE---CNRQEVNAVV 117
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
Y++T Q+ SA++YL K IH DL
Sbjct: 118 LLYMAT-------QISSAMEYLE--KKNFIHRDL 142
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 25.8 bits (55), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
L+E + K + HP +V+L V + F ++E+ +L YL++ +E +
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRE---CNRQEVNAVV 113
Query: 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
Y++T Q+ SA++YL K IH DL
Sbjct: 114 LLYMAT-------QISSAMEYLE--KKNFIHRDL 138
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 25.4 bits (54), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
P A+RE ++ K L H +++L V + + + EY + +DL Y+ ++ ++ R
Sbjct: 77 PGTAIREVSLLKELQHRNIIELKSVIHHN-HRLHLIFEYAE-NDLKKYMDKNPDVSMR-- 132
Query: 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
+S + Q+++ + + + + +H DLKP
Sbjct: 133 ----------VIKSFLYQLINGVNFCHSRR--CLHRDLKP 160
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
RE I + L H +V+L+D + + V + G +L + I RE
Sbjct: 52 REARICRLLKHSNIVRLHDSISEEGFHY-LVFDLVTGGEL------FEDIVAREY----- 99
Query: 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
Y A + Q++ A+ + +++ V+H DLKP
Sbjct: 100 -YSEADASHCIQQILEAVLHCHQM--GVVHRDLKP 131
>pdb|1VJF|A Chain A, Crystal Structure Of A Putative Dna-Binding Protein
(Cc_0111) From Caulobacter Crescentus Cb15 At 1.62 A
Resolution
Length = 180
Score = 25.4 bits (54), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 7/43 (16%)
Query: 25 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
HK LDHP V ++ + EI A GH + +LK K
Sbjct: 30 HKTLDHPPVFRVEEGLEIKA-------AXPGGHTKNLFLKDAK 65
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.140 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,563,437
Number of Sequences: 62578
Number of extensions: 121630
Number of successful extensions: 826
Number of sequences better than 100.0: 439
Number of HSP's better than 100.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 281
Number of HSP's that attempted gapping in prelim test: 621
Number of HSP's gapped (non-prelim): 440
length of query: 122
length of database: 14,973,337
effective HSP length: 84
effective length of query: 38
effective length of database: 9,716,785
effective search space: 369237830
effective search space used: 369237830
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 45 (21.9 bits)