Query psy4991
Match_columns 122
No_of_seqs 115 out of 2137
Neff 10.9
Searched_HMMs 46136
Date Fri Aug 16 23:00:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4991.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4991hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0595|consensus 100.0 5E-30 1.1E-34 167.1 10.3 106 1-121 38-144 (429)
2 KOG0615|consensus 100.0 5.1E-29 1.1E-33 162.9 9.3 106 1-121 200-311 (475)
3 KOG0581|consensus 99.9 6.3E-27 1.4E-31 151.1 9.1 107 1-121 107-214 (364)
4 KOG0575|consensus 99.9 1.4E-26 3E-31 157.0 10.1 107 1-122 46-154 (592)
5 KOG0192|consensus 99.9 4E-26 8.6E-31 151.1 10.8 110 1-121 68-178 (362)
6 KOG1187|consensus 99.9 7.6E-26 1.6E-30 150.1 10.8 110 1-122 102-213 (361)
7 KOG0598|consensus 99.9 7.7E-26 1.7E-30 146.0 8.1 106 1-121 53-160 (357)
8 KOG1026|consensus 99.9 1E-25 2.2E-30 157.4 8.5 118 1-121 519-638 (774)
9 KOG0611|consensus 99.9 1E-25 2.2E-30 148.3 7.5 107 1-122 81-189 (668)
10 KOG0197|consensus 99.9 4.1E-25 8.9E-30 147.8 10.0 107 1-122 233-339 (468)
11 KOG0592|consensus 99.9 3E-25 6.4E-30 149.3 7.9 107 1-122 101-210 (604)
12 KOG0583|consensus 99.9 1.3E-24 2.9E-29 144.6 10.2 106 1-121 45-155 (370)
13 KOG0616|consensus 99.9 4.3E-25 9.3E-30 139.7 6.9 107 1-122 72-180 (355)
14 KOG0600|consensus 99.9 2.7E-24 5.9E-29 143.7 10.8 107 1-121 145-253 (560)
15 KOG0610|consensus 99.9 1.9E-24 4.1E-29 141.6 9.5 109 1-122 105-215 (459)
16 KOG0593|consensus 99.9 9.7E-25 2.1E-29 138.8 6.0 106 1-121 30-136 (396)
17 KOG0591|consensus 99.9 6.1E-25 1.3E-29 138.6 3.9 113 1-121 47-163 (375)
18 KOG0588|consensus 99.9 1E-23 2.2E-28 144.8 9.2 106 1-121 40-147 (786)
19 KOG0198|consensus 99.9 2.5E-23 5.4E-28 134.9 10.2 107 1-121 45-152 (313)
20 KOG0582|consensus 99.9 3.5E-23 7.6E-28 136.9 10.3 109 1-122 54-162 (516)
21 KOG0594|consensus 99.9 6.7E-23 1.5E-27 131.9 10.7 111 1-122 39-156 (323)
22 KOG0659|consensus 99.9 3.1E-23 6.8E-28 129.6 8.6 107 1-122 30-137 (318)
23 cd05102 PTKc_VEGFR3 Catalytic 99.9 7.6E-23 1.7E-27 134.9 11.0 119 1-121 40-209 (338)
24 KOG0661|consensus 99.9 5.4E-24 1.2E-28 141.5 4.9 105 1-120 38-144 (538)
25 KOG0663|consensus 99.9 5.6E-23 1.2E-27 132.1 9.3 108 1-122 104-213 (419)
26 KOG0194|consensus 99.9 3.6E-23 7.7E-28 139.8 8.1 107 1-121 189-297 (474)
27 cd05064 PTKc_EphR_A10 Catalyti 99.9 1.9E-22 4E-27 129.2 11.1 107 1-121 36-142 (266)
28 KOG0607|consensus 99.9 2.8E-23 6E-28 133.3 7.0 105 1-121 106-211 (463)
29 cd05571 STKc_PKB Catalytic dom 99.9 1.2E-22 2.5E-27 133.5 9.4 106 1-121 23-130 (323)
30 KOG0580|consensus 99.9 6.3E-24 1.4E-28 131.0 3.1 108 1-121 50-159 (281)
31 cd05629 STKc_NDR_like_fungal C 99.9 9.6E-23 2.1E-27 136.3 9.1 106 1-121 29-136 (377)
32 cd05096 PTKc_DDR1 Catalytic do 99.9 2.2E-22 4.8E-27 131.0 10.4 118 1-121 49-173 (304)
33 KOG0586|consensus 99.9 1.4E-22 3E-27 137.9 9.4 106 1-121 84-190 (596)
34 PTZ00426 cAMP-dependent protei 99.9 1.5E-22 3.2E-27 134.0 9.3 106 1-121 59-166 (340)
35 PTZ00263 protein kinase A cata 99.9 1.6E-22 3.5E-27 133.2 9.3 106 1-121 46-153 (329)
36 cd05626 STKc_LATS2 Catalytic d 99.9 1.6E-22 3.4E-27 135.5 9.3 106 1-121 29-136 (381)
37 cd05595 STKc_PKB_beta Catalyti 99.9 1.7E-22 3.8E-27 132.7 9.3 106 1-121 23-130 (323)
38 cd05628 STKc_NDR1 Catalytic do 99.9 1.4E-22 3.1E-27 134.9 9.0 106 1-121 29-136 (363)
39 cd05599 STKc_NDR_like Catalyti 99.9 1.2E-22 2.7E-27 135.1 8.6 106 1-121 29-136 (364)
40 KOG0605|consensus 99.9 1.4E-22 3.1E-27 136.2 8.8 107 1-122 169-277 (550)
41 cd05598 STKc_LATS Catalytic do 99.9 1.9E-22 4.1E-27 134.8 9.5 106 1-121 29-136 (376)
42 cd05593 STKc_PKB_gamma Catalyt 99.9 2.6E-22 5.6E-27 132.2 9.8 106 1-121 23-130 (328)
43 KOG4250|consensus 99.9 1.1E-22 2.4E-27 140.4 8.1 109 1-120 41-154 (732)
44 KOG0599|consensus 99.9 6.4E-23 1.4E-27 129.4 6.3 107 1-122 45-159 (411)
45 cd05585 STKc_YPK1_like Catalyt 99.9 2.1E-22 4.6E-27 131.7 9.0 106 1-121 21-128 (312)
46 KOG1989|consensus 99.9 1.8E-22 3.9E-27 141.4 8.7 110 1-121 65-181 (738)
47 cd05625 STKc_LATS1 Catalytic d 99.9 2.2E-22 4.9E-27 134.7 8.8 106 1-121 29-136 (382)
48 cd05582 STKc_RSK_N N-terminal 99.9 3.1E-22 6.7E-27 131.2 9.0 106 1-121 27-133 (318)
49 KOG1094|consensus 99.9 5.3E-23 1.2E-27 140.1 5.5 108 1-121 565-672 (807)
50 cd05594 STKc_PKB_alpha Catalyt 99.9 7.8E-22 1.7E-26 129.7 10.8 106 1-121 23-131 (325)
51 cd05106 PTKc_CSF-1R Catalytic 99.9 5.6E-22 1.2E-26 132.7 10.2 118 1-121 71-247 (374)
52 KOG0585|consensus 99.9 1.5E-22 3.2E-27 134.9 7.3 108 1-122 125-246 (576)
53 KOG0589|consensus 99.9 4E-22 8.6E-27 132.9 9.3 110 1-122 32-142 (426)
54 cd05612 STKc_PRKX_like Catalyt 99.9 2E-22 4.4E-27 130.6 7.6 106 1-121 29-136 (291)
55 cd08227 PK_STRAD_alpha Pseudok 99.9 9.5E-22 2.1E-26 129.3 10.8 108 1-121 28-136 (327)
56 cd05104 PTKc_Kit Catalytic dom 99.9 1E-21 2.3E-26 131.4 11.0 118 1-121 68-249 (375)
57 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 7.6E-22 1.6E-26 127.0 9.9 106 1-121 47-152 (274)
58 cd05105 PTKc_PDGFR_alpha Catal 99.9 1.5E-21 3.2E-26 131.6 11.6 118 1-121 70-272 (400)
59 cd05600 STKc_Sid2p_Dbf2p Catal 99.9 5.3E-22 1.1E-26 130.8 9.0 106 1-121 29-136 (333)
60 cd05584 STKc_p70S6K Catalytic 99.9 5.6E-22 1.2E-26 130.3 8.9 106 1-121 27-135 (323)
61 cd05097 PTKc_DDR_like Catalyti 99.9 1.6E-21 3.6E-26 126.5 10.9 118 1-121 47-164 (295)
62 cd05042 PTKc_Aatyk Catalytic d 99.9 1.3E-21 2.9E-26 125.2 10.3 110 2-121 26-135 (269)
63 cd05588 STKc_aPKC Catalytic do 99.9 1.1E-21 2.3E-26 129.3 9.8 106 1-121 23-131 (329)
64 KOG0196|consensus 99.9 1.4E-22 3.1E-27 141.4 5.8 108 1-122 660-767 (996)
65 cd05627 STKc_NDR2 Catalytic do 99.9 8.1E-22 1.8E-26 131.2 9.2 106 1-121 29-136 (360)
66 cd07869 STKc_PFTAIRE1 Catalyti 99.9 2.5E-21 5.5E-26 126.0 11.2 106 1-121 33-138 (303)
67 KOG0032|consensus 99.9 1.5E-21 3.3E-26 130.2 10.0 105 1-121 63-170 (382)
68 KOG1095|consensus 99.9 7.2E-22 1.6E-26 142.2 9.0 113 1-121 725-837 (1025)
69 cd07871 STKc_PCTAIRE3 Catalyti 99.9 2.2E-21 4.7E-26 125.6 10.5 106 1-121 33-138 (288)
70 cd06650 PKc_MEK1 Catalytic dom 99.9 2.4E-21 5.1E-26 127.8 10.7 106 1-121 33-139 (333)
71 cd06649 PKc_MEK2 Catalytic dom 99.9 2.4E-21 5.3E-26 127.6 10.6 106 1-121 33-139 (331)
72 KOG0660|consensus 99.9 2.9E-22 6.4E-27 129.3 5.7 106 1-121 50-160 (359)
73 KOG0597|consensus 99.9 6.8E-22 1.5E-26 134.5 7.7 105 1-121 30-135 (808)
74 cd05621 STKc_ROCK2 Catalytic d 99.9 1.8E-21 4E-26 130.0 9.6 105 1-121 71-177 (370)
75 cd05115 PTKc_Zap-70 Catalytic 99.9 5.3E-21 1.1E-25 122.0 11.2 106 1-121 25-130 (257)
76 PTZ00267 NIMA-related protein 99.9 3.5E-21 7.6E-26 132.3 10.9 109 1-121 96-204 (478)
77 cd05049 PTKc_Trk Catalytic dom 99.9 6E-21 1.3E-25 122.7 11.3 118 1-121 38-157 (280)
78 KOG0033|consensus 99.9 5.9E-22 1.3E-26 123.3 6.2 105 2-121 40-145 (355)
79 KOG0584|consensus 99.9 9E-22 2E-26 134.3 7.4 97 12-120 82-179 (632)
80 cd05573 STKc_ROCK_NDR_like Cat 99.9 1.5E-21 3.2E-26 129.3 8.2 106 1-121 29-136 (350)
81 cd05084 PTKc_Fes Catalytic dom 99.9 5.6E-21 1.2E-25 121.3 10.6 107 1-121 23-129 (252)
82 cd05618 STKc_aPKC_iota Catalyt 99.9 3.3E-21 7.2E-26 127.0 9.8 106 1-121 23-131 (329)
83 cd05591 STKc_nPKC_epsilon Cata 99.9 2.8E-21 6E-26 126.9 9.4 106 1-121 23-131 (321)
84 cd05095 PTKc_DDR2 Catalytic do 99.9 7E-21 1.5E-25 123.6 11.1 117 1-121 49-165 (296)
85 cd05590 STKc_nPKC_eta Catalyti 99.9 2.4E-21 5.1E-26 127.2 8.9 106 1-121 23-131 (320)
86 cd05596 STKc_ROCK Catalytic do 99.9 3.5E-21 7.5E-26 128.7 9.8 105 1-121 71-177 (370)
87 cd05066 PTKc_EphR_A Catalytic 99.9 8.2E-21 1.8E-25 121.5 11.2 107 1-121 35-141 (267)
88 cd05046 PTK_CCK4 Pseudokinase 99.9 4.6E-21 9.9E-26 123.1 9.9 115 1-121 38-152 (275)
89 cd05592 STKc_nPKC_theta_delta 99.9 3.6E-21 7.9E-26 126.1 9.4 106 1-121 23-131 (316)
90 cd05033 PTKc_EphR Catalytic do 99.9 1.1E-20 2.3E-25 120.9 11.3 107 1-121 35-141 (266)
91 PF07714 Pkinase_Tyr: Protein 99.9 2.9E-21 6.4E-26 123.4 8.7 108 1-121 31-138 (259)
92 cd05051 PTKc_DDR Catalytic dom 99.9 6.7E-21 1.5E-25 123.4 10.5 117 1-121 49-165 (296)
93 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 8.5E-21 1.8E-25 121.4 10.7 106 1-121 35-140 (262)
94 PHA02988 hypothetical protein; 99.9 4.9E-21 1.1E-25 123.9 9.5 107 1-121 46-158 (283)
95 cd05631 STKc_GRK4 Catalytic do 99.9 6.8E-21 1.5E-25 123.1 10.1 108 1-121 28-137 (285)
96 cd05065 PTKc_EphR_B Catalytic 99.9 1.2E-20 2.6E-25 120.9 11.1 107 1-121 35-141 (269)
97 cd05617 STKc_aPKC_zeta Catalyt 99.9 3.7E-21 8.1E-26 126.6 9.0 106 1-121 23-131 (327)
98 KOG0578|consensus 99.9 2E-21 4.3E-26 131.3 7.6 104 1-121 301-404 (550)
99 cd05603 STKc_SGK2 Catalytic do 99.9 4.1E-21 8.9E-26 126.0 8.9 106 1-121 23-131 (321)
100 cd05108 PTKc_EGFR Catalytic do 99.9 1.1E-20 2.3E-25 123.8 10.8 106 1-121 39-144 (316)
101 cd05575 STKc_SGK Catalytic dom 99.9 5.3E-21 1.2E-25 125.6 9.3 106 1-121 23-131 (323)
102 cd06615 PKc_MEK Catalytic doma 99.9 9.3E-21 2E-25 123.7 10.4 106 1-121 29-135 (308)
103 cd05597 STKc_DMPK_like Catalyt 99.9 5.5E-21 1.2E-25 126.0 9.3 107 1-121 29-137 (331)
104 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 1.6E-20 3.6E-25 121.0 11.3 106 1-121 36-142 (283)
105 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 9.9E-21 2.1E-25 120.4 10.1 92 15-121 45-136 (259)
106 cd05601 STKc_CRIK Catalytic do 99.9 6.4E-21 1.4E-25 125.5 9.4 107 1-121 29-137 (330)
107 cd08216 PK_STRAD Pseudokinase 99.9 1.3E-20 2.8E-25 123.1 10.7 108 1-121 28-136 (314)
108 cd05062 PTKc_IGF-1R Catalytic 99.9 1.3E-20 2.8E-25 121.2 10.5 116 1-121 39-154 (277)
109 cd05101 PTKc_FGFR2 Catalytic d 99.9 1.5E-20 3.2E-25 122.4 10.9 118 1-121 50-172 (304)
110 cd05608 STKc_GRK1 Catalytic do 99.9 8.1E-21 1.8E-25 122.5 9.5 110 1-121 21-132 (280)
111 cd05088 PTKc_Tie2 Catalytic do 99.8 1.2E-20 2.6E-25 123.0 10.4 117 2-121 38-159 (303)
112 cd05622 STKc_ROCK1 Catalytic d 99.8 8.6E-21 1.9E-25 126.9 9.9 105 1-121 71-177 (371)
113 cd05107 PTKc_PDGFR_beta Cataly 99.8 1.7E-20 3.7E-25 126.5 11.4 118 1-121 70-274 (401)
114 cd05604 STKc_SGK3 Catalytic do 99.8 6.9E-21 1.5E-25 125.2 9.3 106 1-121 23-131 (325)
115 cd05605 STKc_GRK4_like Catalyt 99.8 1E-20 2.2E-25 122.3 9.9 108 1-121 28-137 (285)
116 cd05086 PTKc_Aatyk2 Catalytic 99.8 2E-20 4.4E-25 119.9 11.2 109 2-121 26-134 (268)
117 cd05570 STKc_PKC Catalytic dom 99.8 7.1E-21 1.5E-25 124.8 9.1 106 1-121 23-131 (318)
118 cd05614 STKc_MSK2_N N-terminal 99.8 7.7E-21 1.7E-25 125.2 9.3 106 1-121 31-140 (332)
119 cd05620 STKc_nPKC_delta Cataly 99.8 8.2E-21 1.8E-25 124.5 9.3 106 1-121 23-131 (316)
120 cd05048 PTKc_Ror Catalytic Dom 99.8 1.8E-20 4E-25 120.7 10.8 118 1-121 38-159 (283)
121 cd05061 PTKc_InsR Catalytic do 99.8 1.7E-20 3.6E-25 121.4 10.6 116 1-121 39-154 (288)
122 KOG0666|consensus 99.8 2E-21 4.4E-26 124.3 6.2 110 1-120 56-166 (438)
123 cd05079 PTKc_Jak1_rpt2 Catalyt 99.8 2.5E-20 5.3E-25 120.3 11.3 108 1-121 36-144 (284)
124 cd05055 PTKc_PDGFR Catalytic d 99.8 1.6E-20 3.6E-25 122.3 10.4 108 1-121 68-176 (302)
125 cd05619 STKc_nPKC_theta Cataly 99.8 1.1E-20 2.3E-25 124.0 9.4 106 1-121 23-131 (316)
126 cd07848 STKc_CDKL5 Catalytic d 99.8 8.5E-21 1.9E-25 122.5 8.9 106 1-121 29-135 (287)
127 cd05052 PTKc_Abl Catalytic dom 99.8 3.5E-20 7.5E-25 118.4 11.6 106 1-121 34-139 (263)
128 cd05036 PTKc_ALK_LTK Catalytic 99.8 1.8E-20 3.8E-25 120.6 10.3 113 1-121 39-151 (277)
129 cd08226 PK_STRAD_beta Pseudoki 99.8 1.4E-20 3E-25 123.9 10.0 108 1-121 28-136 (328)
130 cd05047 PTKc_Tie Catalytic dom 99.8 2.8E-20 6E-25 119.3 11.0 117 2-121 26-147 (270)
131 cd05113 PTKc_Btk_Bmx Catalytic 99.8 3.9E-20 8.5E-25 117.9 11.6 105 1-121 31-135 (256)
132 cd05114 PTKc_Tec_Rlk Catalytic 99.8 3.7E-20 8.1E-25 117.8 11.5 105 1-121 31-135 (256)
133 cd07859 STKc_TDY_MAPK_plant Ca 99.8 1.2E-20 2.5E-25 124.3 9.5 106 1-121 28-138 (338)
134 cd05090 PTKc_Ror1 Catalytic do 99.8 2.1E-20 4.5E-25 120.6 10.4 118 1-121 37-159 (283)
135 cd05045 PTKc_RET Catalytic dom 99.8 1.6E-20 3.5E-25 121.5 9.9 118 1-121 33-162 (290)
136 cd05053 PTKc_FGFR Catalytic do 99.8 2.3E-20 4.9E-25 120.9 10.5 118 1-121 45-167 (293)
137 cd05587 STKc_cPKC Catalytic do 99.8 1.3E-20 2.8E-25 123.9 9.4 106 1-121 28-136 (324)
138 cd05032 PTKc_InsR_like Catalyt 99.8 2.8E-20 6.1E-25 119.4 10.8 116 1-121 39-154 (277)
139 cd05103 PTKc_VEGFR2 Catalytic 99.8 2.9E-20 6.3E-25 123.1 11.1 119 1-121 40-214 (343)
140 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.8 2.4E-20 5.2E-25 119.5 10.3 111 1-121 25-135 (269)
141 cd05607 STKc_GRK7 Catalytic do 99.8 3.4E-20 7.3E-25 119.5 11.0 108 1-121 21-130 (277)
142 PLN00034 mitogen-activated pro 99.8 9.1E-21 2E-25 125.9 8.5 102 1-121 102-203 (353)
143 cd05093 PTKc_TrkB Catalytic do 99.8 4E-20 8.8E-25 119.6 11.2 116 2-121 39-155 (288)
144 cd05602 STKc_SGK1 Catalytic do 99.8 1.4E-20 3.1E-25 123.7 9.3 106 1-121 23-131 (325)
145 cd05624 STKc_MRCK_beta Catalyt 99.8 1.4E-20 3.1E-25 124.0 9.3 107 1-121 29-137 (331)
146 cd05050 PTKc_Musk Catalytic do 99.8 2.9E-20 6.2E-25 120.2 10.2 118 1-121 38-165 (288)
147 cd07872 STKc_PCTAIRE2 Catalyti 99.8 3.6E-20 7.8E-25 120.9 10.8 106 1-121 34-139 (309)
148 cd05116 PTKc_Syk Catalytic dom 99.8 3.6E-20 7.9E-25 118.0 10.5 105 1-121 25-130 (257)
149 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.8 1.4E-20 3E-25 120.0 8.6 94 14-121 42-135 (258)
150 cd05098 PTKc_FGFR1 Catalytic d 99.8 3.5E-20 7.7E-25 120.9 10.5 118 1-121 53-175 (307)
151 cd05100 PTKc_FGFR3 Catalytic d 99.8 4.3E-20 9.4E-25 121.8 10.9 118 1-121 47-169 (334)
152 cd05063 PTKc_EphR_A2 Catalytic 99.8 4.9E-20 1.1E-24 117.9 10.8 107 1-121 36-142 (268)
153 KOG0604|consensus 99.8 3.5E-21 7.6E-26 122.6 5.4 95 15-121 98-196 (400)
154 cd05580 STKc_PKA Catalytic dom 99.8 2.7E-20 5.8E-25 120.5 9.6 106 1-121 29-136 (290)
155 KOG4717|consensus 99.8 1.7E-20 3.7E-25 127.0 8.8 105 1-120 46-152 (864)
156 PRK13184 pknD serine/threonine 99.8 3.3E-20 7.1E-25 133.7 10.8 117 1-121 30-148 (932)
157 cd00192 PTKc Catalytic domain 99.8 4.9E-20 1.1E-24 117.1 10.5 115 1-121 26-140 (262)
158 cd05589 STKc_PKN Catalytic dom 99.8 2E-20 4.4E-25 122.9 9.0 105 1-121 27-136 (324)
159 cd05085 PTKc_Fer Catalytic dom 99.8 6.4E-20 1.4E-24 116.3 11.0 107 1-121 22-128 (250)
160 cd05586 STKc_Sck1_like Catalyt 99.8 1.8E-20 4E-25 123.4 8.8 106 1-121 21-131 (330)
161 cd05094 PTKc_TrkC Catalytic do 99.8 6.5E-20 1.4E-24 118.8 11.2 116 2-121 39-158 (291)
162 cd05099 PTKc_FGFR4 Catalytic d 99.8 5.8E-20 1.3E-24 120.2 11.0 118 1-121 47-169 (314)
163 cd05089 PTKc_Tie1 Catalytic do 99.8 4.9E-20 1.1E-24 119.7 10.4 117 2-121 33-154 (297)
164 cd05068 PTKc_Frk_like Catalyti 99.8 7.7E-20 1.7E-24 116.7 11.0 106 1-121 33-138 (261)
165 cd08219 STKc_Nek3 Catalytic do 99.8 1E-19 2.2E-24 115.7 11.5 108 1-121 28-135 (255)
166 cd05615 STKc_cPKC_alpha Cataly 99.8 2.5E-20 5.4E-25 122.5 8.9 106 1-121 28-136 (323)
167 cd05610 STKc_MASTL Catalytic d 99.8 3.1E-20 6.7E-25 131.9 10.0 106 1-121 32-139 (669)
168 KOG0658|consensus 99.8 3.6E-21 7.9E-26 124.5 4.7 106 1-122 52-161 (364)
169 cd05059 PTKc_Tec_like Catalyti 99.8 8.8E-20 1.9E-24 116.2 11.1 105 1-121 31-135 (256)
170 cd05072 PTKc_Lyn Catalytic dom 99.8 9.5E-20 2.1E-24 116.2 11.1 106 1-121 33-138 (261)
171 cd05060 PTKc_Syk_like Catalyti 99.8 7.4E-20 1.6E-24 116.5 10.5 105 1-121 26-130 (257)
172 cd05091 PTKc_Ror2 Catalytic do 99.8 7.3E-20 1.6E-24 118.0 10.3 118 1-121 38-159 (283)
173 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.8 8.8E-20 1.9E-24 117.7 10.7 107 1-121 36-143 (284)
174 KOG4721|consensus 99.8 6.4E-21 1.4E-25 130.1 5.6 87 20-121 161-247 (904)
175 cd05623 STKc_MRCK_alpha Cataly 99.8 3.4E-20 7.4E-25 122.3 9.0 107 1-121 29-137 (332)
176 cd05616 STKc_cPKC_beta Catalyt 99.8 4.3E-20 9.3E-25 121.3 9.4 106 1-121 28-136 (323)
177 cd05058 PTKc_Met_Ron Catalytic 99.8 8.6E-20 1.9E-24 116.4 10.5 108 1-121 26-133 (262)
178 cd06646 STKc_MAP4K5 Catalytic 99.8 8.8E-20 1.9E-24 116.7 10.6 105 1-121 37-141 (267)
179 cd05609 STKc_MAST Catalytic do 99.8 5E-20 1.1E-24 120.1 9.6 106 1-121 29-136 (305)
180 cd07873 STKc_PCTAIRE1 Catalyti 99.8 1E-19 2.2E-24 118.4 10.9 106 1-121 34-139 (301)
181 cd05057 PTKc_EGFR_like Catalyt 99.8 1.4E-19 3E-24 116.5 11.4 106 1-121 39-144 (279)
182 cd05054 PTKc_VEGFR Catalytic d 99.8 1.1E-19 2.3E-24 120.2 11.1 119 1-121 40-208 (337)
183 cd08529 STKc_FA2-like Catalyti 99.8 1.1E-19 2.4E-24 115.4 10.7 108 1-121 28-136 (256)
184 cd05092 PTKc_TrkA Catalytic do 99.8 1.2E-19 2.7E-24 116.9 11.0 116 2-121 39-157 (280)
185 KOG0694|consensus 99.8 1.2E-20 2.5E-25 130.1 6.5 105 1-121 396-503 (694)
186 PHA03212 serine/threonine kina 99.8 5.7E-20 1.2E-24 123.7 9.7 90 16-121 128-217 (391)
187 cd05040 PTKc_Ack_like Catalyti 99.8 1E-19 2.2E-24 115.8 10.3 107 1-121 26-132 (257)
188 cd05039 PTKc_Csk_like Catalyti 99.8 1E-19 2.2E-24 115.8 10.3 106 1-121 32-137 (256)
189 cd05044 PTKc_c-ros Catalytic d 99.8 5E-20 1.1E-24 117.9 8.8 113 1-121 29-141 (269)
190 cd06645 STKc_MAP4K3 Catalytic 99.8 1E-19 2.2E-24 116.4 10.1 105 1-121 37-141 (267)
191 cd05056 PTKc_FAK Catalytic dom 99.8 1.2E-19 2.7E-24 116.2 10.6 106 1-121 37-142 (270)
192 cd05148 PTKc_Srm_Brk Catalytic 99.8 1.5E-19 3.2E-24 115.3 10.7 107 1-121 33-139 (261)
193 cd08221 STKc_Nek9 Catalytic do 99.8 1.6E-19 3.5E-24 114.8 10.9 108 1-121 28-136 (256)
194 cd06630 STKc_MEKK1 Catalytic d 99.8 7.7E-20 1.7E-24 116.9 9.4 106 1-121 28-138 (268)
195 cd06625 STKc_MEKK3_like Cataly 99.8 9.9E-20 2.1E-24 116.1 9.7 106 1-121 30-139 (263)
196 KOG1151|consensus 99.8 6.5E-20 1.4E-24 122.5 9.1 109 1-121 491-605 (775)
197 cd08228 STKc_Nek6 Catalytic do 99.8 1.4E-19 2.9E-24 115.8 10.3 110 1-121 30-141 (267)
198 cd06613 STKc_MAP4K3_like Catal 99.8 2.1E-19 4.5E-24 114.5 11.1 106 1-121 31-136 (262)
199 smart00219 TyrKc Tyrosine kina 99.8 1.9E-19 4.2E-24 114.2 11.0 108 1-121 31-138 (258)
200 cd05043 PTK_Ryk Pseudokinase d 99.8 1.6E-19 3.5E-24 116.2 10.6 115 1-121 38-152 (280)
201 cd05630 STKc_GRK6 Catalytic do 99.8 1.6E-19 3.4E-24 116.9 10.5 108 1-121 28-137 (285)
202 cd07847 STKc_CDKL1_4 Catalytic 99.8 1.4E-19 3.1E-24 116.6 10.2 106 1-121 29-135 (286)
203 KOG0667|consensus 99.8 4.9E-20 1.1E-24 126.2 8.3 105 1-121 214-324 (586)
204 cd07853 STKc_NLK Catalytic dom 99.8 7.7E-20 1.7E-24 122.2 9.1 105 1-121 28-138 (372)
205 cd05082 PTKc_Csk Catalytic dom 99.8 4E-19 8.7E-24 113.1 12.0 106 1-121 32-137 (256)
206 cd08224 STKc_Nek6_Nek7 Catalyt 99.8 2.8E-19 6.2E-24 114.1 11.3 110 1-121 30-141 (267)
207 cd06611 STKc_SLK_like Catalyti 99.8 1.5E-19 3.3E-24 116.3 10.1 106 1-121 33-138 (280)
208 cd05109 PTKc_HER2 Catalytic do 99.8 1.9E-19 4.1E-24 115.9 10.5 106 1-121 39-144 (279)
209 cd05034 PTKc_Src_like Catalyti 99.8 3E-19 6.5E-24 113.8 11.3 106 1-121 33-138 (261)
210 cd05035 PTKc_Axl_like Catalyti 99.8 2.6E-19 5.6E-24 114.6 11.0 113 1-121 30-148 (273)
211 cd05578 STKc_Yank1 Catalytic d 99.8 5.4E-20 1.2E-24 117.1 7.8 106 1-121 28-135 (258)
212 KOG4257|consensus 99.8 6.3E-20 1.4E-24 126.4 8.5 106 1-121 421-526 (974)
213 cd07844 STKc_PCTAIRE_like Cata 99.8 2E-19 4.4E-24 116.3 10.5 106 1-121 33-138 (291)
214 cd05632 STKc_GRK5 Catalytic do 99.8 2.1E-19 4.6E-24 116.2 10.4 108 1-121 28-137 (285)
215 cd06628 STKc_MAPKKK_Byr2_like 99.8 2E-19 4.3E-24 115.0 10.1 91 16-121 51-141 (267)
216 cd06620 PKc_MAPKK_Byr1_like Ca 99.8 1.9E-19 4.1E-24 116.2 10.1 106 1-121 33-139 (284)
217 cd06642 STKc_STK25-YSK1 Cataly 99.8 1.7E-19 3.6E-24 116.1 9.7 105 1-121 32-136 (277)
218 cd05574 STKc_phototropin_like 99.8 3E-19 6.5E-24 116.8 11.0 108 1-121 29-138 (316)
219 cd05572 STKc_cGK_PKG Catalytic 99.8 1.2E-19 2.7E-24 115.7 8.9 106 1-121 21-128 (262)
220 cd05075 PTKc_Axl Catalytic dom 99.8 3.4E-19 7.3E-24 114.2 10.8 113 1-121 29-147 (272)
221 cd05038 PTKc_Jak_rpt2 Catalyti 99.8 2.6E-19 5.7E-24 115.2 10.3 108 1-121 36-144 (284)
222 cd05041 PTKc_Fes_like Catalyti 99.8 3.8E-19 8.2E-24 112.8 10.8 107 1-121 22-128 (251)
223 cd08220 STKc_Nek8 Catalytic do 99.8 3.2E-19 6.9E-24 113.3 10.3 108 1-121 28-136 (256)
224 KOG2345|consensus 99.8 7.7E-20 1.7E-24 113.7 7.1 112 1-121 49-164 (302)
225 cd06631 STKc_YSK4 Catalytic do 99.8 3.6E-19 7.9E-24 113.7 10.6 106 1-121 27-137 (265)
226 cd05579 STKc_MAST_like Catalyt 99.8 1E-19 2.2E-24 115.9 8.0 106 1-121 21-128 (265)
227 cd05067 PTKc_Lck_Blk Catalytic 99.8 4.6E-19 1E-23 113.0 10.9 105 1-121 33-137 (260)
228 cd05577 STKc_GRK Catalytic dom 99.8 1.9E-19 4.2E-24 115.8 9.3 108 1-121 21-130 (277)
229 cd06640 STKc_MST4 Catalytic do 99.8 3.5E-19 7.5E-24 114.6 10.4 105 1-121 32-136 (277)
230 cd05111 PTK_HER3 Pseudokinase 99.8 4.6E-19 9.9E-24 114.3 11.0 105 2-121 40-144 (279)
231 cd06619 PKc_MKK5 Catalytic dom 99.8 2.3E-19 5E-24 115.6 9.5 102 1-121 29-130 (279)
232 cd05069 PTKc_Yes Catalytic dom 99.8 7E-19 1.5E-23 112.3 11.7 105 1-121 33-137 (260)
233 cd05071 PTKc_Src Catalytic dom 99.8 6E-19 1.3E-23 112.8 11.4 105 1-121 33-137 (262)
234 cd07836 STKc_Pho85 Catalytic d 99.8 4E-19 8.7E-24 114.5 10.6 108 1-121 28-135 (284)
235 cd07861 STKc_CDK1_euk Catalyti 99.8 4.3E-19 9.4E-24 114.4 10.8 108 1-121 28-136 (285)
236 cd08223 STKc_Nek4 Catalytic do 99.8 4.6E-19 1E-23 112.7 10.8 109 1-121 28-137 (257)
237 cd06622 PKc_MAPKK_PBS2_like Ca 99.8 1.6E-19 3.4E-24 116.6 8.7 109 1-121 29-138 (286)
238 cd06624 STKc_ASK Catalytic dom 99.8 3.7E-19 8.1E-24 113.9 10.3 108 1-121 36-143 (268)
239 cd08229 STKc_Nek7 Catalytic do 99.8 2.4E-19 5.2E-24 114.6 9.4 110 1-121 30-141 (267)
240 cd06605 PKc_MAPKK Catalytic do 99.8 2.1E-19 4.5E-24 114.7 9.0 107 1-121 29-136 (265)
241 cd06654 STKc_PAK1 Catalytic do 99.8 3.8E-19 8.3E-24 115.6 10.4 104 1-121 48-151 (296)
242 cd06629 STKc_MAPKKK_Bck1_like 99.8 3.6E-19 7.8E-24 114.1 10.1 91 16-121 53-143 (272)
243 KOG0193|consensus 99.8 4.9E-20 1.1E-24 125.8 6.2 106 1-121 417-523 (678)
244 cd07868 STKc_CDK8 Catalytic do 99.8 4.3E-19 9.3E-24 116.1 10.3 111 1-120 31-142 (317)
245 cd06643 STKc_SLK Catalytic dom 99.8 6.6E-19 1.4E-23 113.5 11.0 105 2-121 34-138 (282)
246 cd06623 PKc_MAPKK_plant_like C 99.8 4.6E-19 1E-23 112.9 9.9 106 1-121 29-135 (264)
247 cd07862 STKc_CDK6 Catalytic do 99.8 7.3E-19 1.6E-23 113.7 10.9 108 1-121 30-145 (290)
248 cd06656 STKc_PAK3 Catalytic do 99.8 5.6E-19 1.2E-23 114.8 10.4 104 1-121 47-150 (297)
249 cd07870 STKc_PFTAIRE2 Catalyti 99.8 4.5E-19 9.7E-24 114.8 9.9 106 1-121 33-138 (291)
250 cd07841 STKc_CDK7 Catalytic do 99.8 4.7E-19 1E-23 114.9 10.0 106 1-121 28-137 (298)
251 PHA03207 serine/threonine kina 99.8 2.4E-19 5.2E-24 120.7 8.8 89 17-121 132-220 (392)
252 cd05070 PTKc_Fyn_Yrk Catalytic 99.8 9.8E-19 2.1E-23 111.5 11.2 105 1-121 33-137 (260)
253 cd08218 STKc_Nek1 Catalytic do 99.8 6.4E-19 1.4E-23 112.0 10.3 108 1-121 28-136 (256)
254 cd05110 PTKc_HER4 Catalytic do 99.8 5.8E-19 1.3E-23 115.0 10.3 106 1-121 39-144 (303)
255 KOG0662|consensus 99.8 9E-20 2E-24 109.4 5.8 106 1-122 30-137 (292)
256 cd06621 PKc_MAPKK_Pek1_like Ca 99.8 7.5E-19 1.6E-23 113.6 10.6 111 1-121 29-140 (287)
257 cd06644 STKc_STK10_LOK Catalyt 99.8 1.1E-18 2.4E-23 113.1 11.3 106 1-121 40-145 (292)
258 PF00069 Pkinase: Protein kina 99.8 1.4E-19 3E-24 115.1 6.9 106 1-121 27-133 (260)
259 cd05613 STKc_MSK1_N N-terminal 99.8 5.1E-19 1.1E-23 114.5 9.7 106 1-121 31-140 (290)
260 PTZ00266 NIMA-related protein 99.8 5.9E-19 1.3E-23 128.1 10.9 113 1-121 41-160 (1021)
261 cd05112 PTKc_Itk Catalytic dom 99.8 1.5E-18 3.3E-23 110.3 11.6 105 1-121 31-135 (256)
262 cd06652 STKc_MEKK2 Catalytic d 99.8 9E-19 1.9E-23 112.0 10.4 107 1-121 30-141 (265)
263 cd05073 PTKc_Hck Catalytic dom 99.8 1.2E-18 2.6E-23 111.2 11.0 105 1-121 33-137 (260)
264 cd06659 STKc_PAK6 Catalytic do 99.8 5.7E-19 1.2E-23 114.8 9.6 104 1-121 49-152 (297)
265 cd07832 STKc_CCRK Catalytic do 99.8 9.3E-19 2E-23 112.8 10.5 106 1-121 28-134 (286)
266 cd06658 STKc_PAK5 Catalytic do 99.8 3.3E-19 7.1E-24 115.7 8.3 104 1-121 50-153 (292)
267 cd06641 STKc_MST3 Catalytic do 99.8 9.8E-19 2.1E-23 112.6 10.4 105 1-121 32-136 (277)
268 cd06632 STKc_MEKK1_plant Catal 99.8 9.5E-19 2E-23 111.2 10.2 106 1-121 28-137 (258)
269 cd06614 STKc_PAK Catalytic dom 99.8 1.3E-18 2.7E-23 112.4 10.9 105 1-121 47-151 (286)
270 cd06626 STKc_MEKK4 Catalytic d 99.8 6.6E-19 1.4E-23 112.3 9.5 106 1-121 28-134 (264)
271 cd08225 STKc_Nek5 Catalytic do 99.8 6.7E-19 1.5E-23 111.8 9.2 108 1-121 28-136 (257)
272 cd06917 STKc_NAK1_like Catalyt 99.8 9.3E-19 2E-23 112.5 9.9 105 1-121 29-136 (277)
273 cd06655 STKc_PAK2 Catalytic do 99.8 1.2E-18 2.6E-23 113.3 10.6 104 1-121 47-150 (296)
274 KOG4236|consensus 99.8 8.8E-19 1.9E-23 119.1 10.1 107 1-121 592-699 (888)
275 cd07846 STKc_CDKL2_3 Catalytic 99.8 3.8E-19 8.2E-24 114.7 8.0 106 1-121 29-135 (286)
276 cd06610 STKc_OSR1_SPAK Catalyt 99.8 1.5E-18 3.3E-23 110.7 10.6 109 1-121 29-137 (267)
277 cd06609 STKc_MST3_like Catalyt 99.8 8.9E-19 1.9E-23 112.5 9.4 105 1-121 29-133 (274)
278 PHA03211 serine/threonine kina 99.8 1.1E-18 2.3E-23 119.5 10.3 91 16-121 205-295 (461)
279 cd07876 STKc_JNK2 Catalytic do 99.8 8.8E-19 1.9E-23 116.6 9.7 104 1-121 49-158 (359)
280 KOG4278|consensus 99.8 1.7E-19 3.6E-24 124.6 5.9 106 1-121 295-400 (1157)
281 cd05083 PTKc_Chk Catalytic dom 99.8 3.6E-18 7.7E-23 108.6 11.6 104 1-121 32-135 (254)
282 cd05576 STKc_RPK118_like Catal 99.8 7.2E-19 1.6E-23 111.1 8.4 100 1-121 21-120 (237)
283 cd06612 STKc_MST1_2 Catalytic 99.8 1.9E-18 4.1E-23 109.7 10.4 104 1-121 31-134 (256)
284 cd07867 STKc_CDC2L6 Catalytic 99.8 1.5E-18 3.3E-23 113.4 10.2 111 1-120 31-142 (317)
285 cd07860 STKc_CDK2_3 Catalytic 99.8 1.4E-18 3E-23 112.0 9.5 107 1-121 28-135 (284)
286 cd06653 STKc_MEKK3_like_1 Cata 99.8 1.8E-18 3.9E-23 110.6 9.9 107 1-121 30-141 (264)
287 cd06627 STKc_Cdc7_like Catalyt 99.8 2.1E-18 4.6E-23 109.2 10.2 106 1-121 28-134 (254)
288 PLN00009 cyclin-dependent kina 99.8 4E-18 8.7E-23 110.5 11.5 107 1-121 30-137 (294)
289 PTZ00283 serine/threonine prot 99.8 1.2E-18 2.7E-23 120.3 9.5 111 1-121 60-178 (496)
290 cd05633 STKc_GRK3 Catalytic do 99.8 1.5E-18 3.3E-23 111.9 9.4 106 1-121 22-132 (279)
291 cd05123 STKc_AGC Catalytic dom 99.8 1.4E-18 3E-23 110.0 9.1 106 1-121 21-128 (250)
292 cd07839 STKc_CDK5 Catalytic do 99.8 9.7E-19 2.1E-23 112.8 8.2 106 1-121 28-134 (284)
293 cd07843 STKc_CDC2L1 Catalytic 99.8 1.7E-18 3.7E-23 112.1 9.4 106 1-121 33-141 (293)
294 cd06648 STKc_PAK_II Catalytic 99.8 3.2E-18 7E-23 110.7 10.6 104 1-121 47-150 (285)
295 cd06651 STKc_MEKK3 Catalytic d 99.8 2.4E-18 5.1E-23 110.1 9.9 107 1-121 30-141 (266)
296 cd06638 STKc_myosinIIIA Cataly 99.8 3.2E-18 7E-23 110.4 10.5 109 1-121 46-159 (286)
297 cd07833 STKc_CDKL Catalytic do 99.8 1.1E-18 2.4E-23 112.5 8.4 106 1-121 29-135 (288)
298 KOG0574|consensus 99.8 5.2E-19 1.1E-23 113.4 6.4 104 1-121 61-164 (502)
299 cd05611 STKc_Rim15_like Cataly 99.8 1.9E-18 4.1E-23 110.2 9.1 106 1-121 24-132 (260)
300 KOG0608|consensus 99.8 7E-19 1.5E-23 121.6 7.5 106 2-122 658-765 (1034)
301 cd07875 STKc_JNK1 Catalytic do 99.8 2.4E-18 5.3E-23 114.7 9.9 104 1-121 52-161 (364)
302 cd07874 STKc_JNK3 Catalytic do 99.8 1.5E-18 3.2E-23 115.3 8.9 104 1-121 45-154 (355)
303 KOG0577|consensus 99.8 1.6E-19 3.6E-24 123.8 4.2 106 1-121 54-161 (948)
304 cd06637 STKc_TNIK Catalytic do 99.8 4.6E-18 1E-22 108.9 10.7 107 1-121 34-146 (272)
305 PRK10345 hypothetical protein; 99.8 3.1E-18 6.7E-23 106.4 9.4 102 2-121 28-140 (210)
306 cd07842 STKc_CDK8_like Catalyt 99.8 4.9E-18 1.1E-22 110.9 10.7 110 1-121 30-143 (316)
307 KOG0690|consensus 99.8 1.2E-19 2.7E-24 117.1 3.0 107 1-122 196-304 (516)
308 PHA03209 serine/threonine kina 99.8 3E-18 6.6E-23 114.1 9.7 89 18-121 104-192 (357)
309 cd06647 STKc_PAK_I Catalytic d 99.8 3.4E-18 7.3E-23 111.0 9.6 104 1-121 47-150 (293)
310 cd05583 STKc_MSK_N N-terminal 99.8 1.6E-18 3.6E-23 112.0 8.1 106 1-121 31-140 (288)
311 PTZ00036 glycogen synthase kin 99.8 4.7E-18 1E-22 116.0 10.7 105 1-121 94-205 (440)
312 KOG0612|consensus 99.8 2.8E-19 6.2E-24 128.9 4.8 106 1-121 103-210 (1317)
313 KOG0579|consensus 99.8 3.9E-19 8.4E-24 123.1 5.2 104 2-120 61-164 (1187)
314 cd06657 STKc_PAK4 Catalytic do 99.8 4.4E-18 9.4E-23 110.5 9.8 104 1-121 48-151 (292)
315 cd05074 PTKc_Tyro3 Catalytic d 99.8 9.1E-18 2E-22 107.6 11.0 113 1-121 30-148 (273)
316 cd07878 STKc_p38beta_MAPK11 Ca 99.8 2.8E-18 6E-23 113.5 8.7 105 1-121 43-153 (343)
317 cd05581 STKc_PDK1 Catalytic do 99.8 1.8E-18 4E-23 111.0 7.5 106 1-121 29-137 (280)
318 cd06617 PKc_MKK3_6 Catalytic d 99.8 6.1E-18 1.3E-22 108.9 9.9 109 1-121 29-139 (283)
319 cd08217 STKc_Nek2 Catalytic do 99.8 5.9E-18 1.3E-22 107.7 9.7 111 1-121 28-145 (265)
320 cd08215 STKc_Nek Catalytic dom 99.8 1.1E-17 2.3E-22 106.1 10.7 110 1-121 28-138 (258)
321 cd07835 STKc_CDK1_like Catalyt 99.8 4.9E-18 1.1E-22 109.4 9.2 107 1-121 27-134 (283)
322 KOG0614|consensus 99.8 5.7E-20 1.2E-24 124.0 0.2 106 1-121 448-555 (732)
323 cd07863 STKc_CDK4 Catalytic do 99.8 8.8E-18 1.9E-22 108.5 10.4 108 1-121 28-143 (288)
324 KOG4645|consensus 99.8 2.8E-19 6.1E-24 130.2 3.7 106 2-122 1264-1370(1509)
325 cd06639 STKc_myosinIIIB Cataly 99.8 1.5E-17 3.2E-22 107.7 10.9 109 1-121 50-163 (291)
326 cd05122 PKc_STE Catalytic doma 99.8 1.2E-17 2.5E-22 105.5 10.3 106 1-121 28-133 (253)
327 cd05606 STKc_beta_ARK Catalyti 99.8 8.5E-18 1.8E-22 108.4 9.7 106 1-121 22-132 (278)
328 cd07855 STKc_ERK5 Catalytic do 99.8 3.2E-18 6.9E-23 112.9 7.7 106 1-121 33-142 (334)
329 cd07845 STKc_CDK10 Catalytic d 99.8 1.4E-17 3E-22 108.7 10.6 107 1-121 35-143 (309)
330 PTZ00024 cyclin-dependent prot 99.8 8.7E-18 1.9E-22 110.8 9.7 89 17-121 66-154 (335)
331 cd06607 STKc_TAO Catalytic dom 99.8 7.2E-18 1.6E-22 110.0 9.0 106 1-121 43-150 (307)
332 cd08530 STKc_CNK2-like Catalyt 99.8 6.7E-18 1.5E-22 107.1 8.6 110 1-121 28-138 (256)
333 cd07850 STKc_JNK Catalytic dom 99.8 1.1E-17 2.3E-22 111.2 9.8 104 1-121 44-153 (353)
334 cd06606 STKc_MAPKKK Catalytic 99.8 1.2E-17 2.5E-22 105.8 9.6 106 1-121 28-136 (260)
335 cd06635 STKc_TAO1 Catalytic do 99.8 1.6E-17 3.5E-22 108.9 10.5 106 1-121 53-160 (317)
336 cd07831 STKc_MOK Catalytic dom 99.8 1E-17 2.2E-22 107.8 9.3 106 1-121 27-135 (282)
337 KOG0200|consensus 99.8 9E-18 2E-22 118.3 9.6 119 1-122 331-454 (609)
338 cd06608 STKc_myosinIII_like Ca 99.8 1.3E-17 2.8E-22 106.8 9.6 109 1-121 34-148 (275)
339 PTZ00284 protein kinase; Provi 99.7 9.7E-18 2.1E-22 115.1 9.4 104 1-121 157-267 (467)
340 cd07865 STKc_CDK9 Catalytic do 99.7 1.4E-17 3E-22 108.4 9.7 107 1-121 40-154 (310)
341 cd07840 STKc_CDK9_like Catalyt 99.7 1E-17 2.3E-22 107.8 9.0 106 1-121 27-135 (287)
342 PLN00113 leucine-rich repeat r 99.7 9.8E-18 2.1E-22 123.2 9.8 100 1-121 718-818 (968)
343 cd07849 STKc_ERK1_2_like Catal 99.7 1.2E-17 2.5E-22 110.3 9.0 105 1-121 33-141 (336)
344 cd06636 STKc_MAP4K4_6 Catalyti 99.7 1.9E-17 4.1E-22 106.7 9.7 107 1-121 44-156 (282)
345 cd07856 STKc_Sty1_Hog1 Catalyt 99.7 2.5E-17 5.5E-22 108.6 10.4 105 1-121 38-143 (328)
346 cd07880 STKc_p38gamma_MAPK12 C 99.7 1.8E-17 3.9E-22 109.8 9.6 105 1-121 43-153 (343)
347 KOG0199|consensus 99.7 2.5E-18 5.5E-23 119.7 5.7 107 1-121 141-247 (1039)
348 cd07858 STKc_TEY_MAPK_plant Ca 99.7 1.2E-17 2.6E-22 110.3 8.6 106 1-121 33-143 (337)
349 KOG3653|consensus 99.7 9.7E-18 2.1E-22 112.0 7.9 105 1-122 236-352 (534)
350 KOG2052|consensus 99.7 1.2E-17 2.7E-22 110.9 8.3 105 1-122 237-352 (513)
351 KOG0201|consensus 99.7 3.6E-19 7.9E-24 117.7 0.9 106 1-121 41-146 (467)
352 cd07830 STKc_MAK_like Catalyti 99.7 1.5E-17 3.4E-22 107.0 8.5 107 1-121 27-134 (283)
353 cd08222 STKc_Nek11 Catalytic d 99.7 2.1E-17 4.5E-22 105.3 9.0 97 14-121 45-141 (260)
354 cd06633 STKc_TAO3 Catalytic do 99.7 4E-17 8.7E-22 106.9 10.4 106 1-121 49-156 (313)
355 PHA03390 pk1 serine/threonine- 99.7 2.6E-17 5.7E-22 105.6 9.3 78 29-121 67-144 (267)
356 cd07852 STKc_MAPK15 Catalytic 99.7 2.6E-17 5.7E-22 108.7 9.6 105 1-121 35-142 (337)
357 cd07864 STKc_CDK12 Catalytic d 99.7 1.6E-17 3.4E-22 108.0 8.4 107 1-121 35-151 (302)
358 cd07834 STKc_MAPK Catalytic do 99.7 8.9E-18 1.9E-22 110.5 7.3 106 1-121 28-138 (330)
359 cd07837 STKc_CdkB_plant Cataly 99.7 3.9E-17 8.4E-22 105.8 10.0 111 1-121 29-145 (295)
360 cd08528 STKc_Nek10 Catalytic d 99.7 6.8E-17 1.5E-21 103.5 10.9 96 15-121 52-149 (269)
361 PHA03210 serine/threonine kina 99.7 1.3E-17 2.9E-22 115.3 7.8 97 14-121 206-302 (501)
362 cd05118 STKc_CMGC Catalytic do 99.7 3.3E-17 7.2E-22 105.4 8.8 106 1-121 27-133 (283)
363 cd07829 STKc_CDK_like Catalyti 99.7 3E-17 6.4E-22 105.6 8.5 106 1-121 27-133 (282)
364 cd06634 STKc_TAO2 Catalytic do 99.7 6.9E-17 1.5E-21 105.5 9.8 106 1-121 43-150 (308)
365 KOG1025|consensus 99.7 4.3E-18 9.3E-23 120.2 3.9 106 1-121 728-833 (1177)
366 PRK09188 serine/threonine prot 99.7 5.6E-17 1.2E-21 107.8 8.8 96 1-121 47-147 (365)
367 cd07857 STKc_MPK1 Catalytic do 99.7 6.9E-17 1.5E-21 106.5 9.0 106 1-121 30-140 (332)
368 cd07854 STKc_MAPK4_6 Catalytic 99.7 6.6E-17 1.4E-21 107.1 8.6 104 1-121 33-149 (342)
369 KOG4279|consensus 99.7 4.4E-17 9.6E-22 113.9 7.9 106 1-120 603-709 (1226)
370 cd06616 PKc_MKK4 Catalytic dom 99.7 1.1E-16 2.4E-21 103.4 9.3 110 1-121 32-143 (288)
371 cd07866 STKc_BUR1 Catalytic do 99.7 5.7E-17 1.2E-21 105.6 7.9 107 1-121 36-150 (311)
372 KOG1290|consensus 99.7 6.6E-17 1.4E-21 108.6 8.1 106 1-120 106-222 (590)
373 KOG0986|consensus 99.7 6.4E-18 1.4E-22 112.8 3.1 95 14-121 228-322 (591)
374 cd07877 STKc_p38alpha_MAPK14 C 99.7 1.8E-16 3.9E-21 105.2 10.0 105 1-121 45-155 (345)
375 smart00220 S_TKc Serine/Threon 99.7 1.2E-16 2.7E-21 100.1 8.8 106 1-121 17-122 (244)
376 KOG1035|consensus 99.7 2.7E-17 5.8E-22 119.5 6.4 35 85-121 698-732 (1351)
377 cd07838 STKc_CDK4_6_like Catal 99.7 2.9E-16 6.3E-21 101.2 10.7 107 1-121 27-142 (287)
378 cd05147 RIO1_euk RIO kinase fa 99.7 3.7E-17 8E-22 100.4 6.2 86 19-121 67-153 (190)
379 KOG1027|consensus 99.7 3.2E-17 7E-22 115.4 5.8 105 1-121 536-641 (903)
380 KOG0984|consensus 99.7 6E-17 1.3E-21 98.9 6.2 111 1-122 74-185 (282)
381 cd06618 PKc_MKK7 Catalytic dom 99.7 2E-16 4.2E-21 102.8 9.1 106 1-121 43-150 (296)
382 KOG0671|consensus 99.7 4.8E-17 1E-21 106.3 5.6 106 1-122 117-228 (415)
383 cd07851 STKc_p38 Catalytic dom 99.7 1.3E-16 2.9E-21 105.6 7.6 105 1-121 43-153 (343)
384 cd00180 PKc Catalytic domain o 99.7 9.9E-16 2.2E-20 93.9 10.5 107 1-121 21-127 (215)
385 KOG0665|consensus 99.7 4.1E-17 8.8E-22 104.7 4.3 104 1-121 44-153 (369)
386 KOG0587|consensus 99.7 1.2E-15 2.6E-20 108.2 11.6 108 1-122 47-159 (953)
387 KOG0668|consensus 99.7 1.1E-16 2.5E-21 99.2 5.3 99 2-121 67-167 (338)
388 cd07879 STKc_p38delta_MAPK13 C 99.7 4.5E-16 9.9E-21 103.1 8.4 104 1-121 43-152 (342)
389 cd05145 RIO1_like RIO kinase f 99.7 8.9E-16 1.9E-20 94.3 8.6 85 19-120 67-152 (190)
390 smart00221 STYKc Protein kinas 99.7 1.5E-15 3.2E-20 94.5 9.5 107 1-121 27-133 (225)
391 KOG0669|consensus 99.6 7.2E-17 1.5E-21 101.3 2.7 103 5-121 50-159 (376)
392 KOG0603|consensus 99.6 5.1E-16 1.1E-20 106.7 6.3 98 2-120 351-449 (612)
393 KOG0696|consensus 99.6 1.3E-16 2.8E-21 106.1 2.9 106 1-121 377-485 (683)
394 PRK10359 lipopolysaccharide co 99.6 1.5E-15 3.3E-20 95.2 7.3 99 1-121 57-170 (232)
395 KOG1152|consensus 99.6 6.1E-16 1.3E-20 106.0 5.5 106 1-121 589-705 (772)
396 KOG1345|consensus 99.6 5.6E-16 1.2E-20 98.1 3.9 103 2-121 53-156 (378)
397 PLN03224 probable serine/threo 99.6 1.2E-14 2.5E-19 100.5 9.2 103 17-121 218-344 (507)
398 KOG0596|consensus 99.6 9.4E-15 2E-19 99.7 8.2 96 11-121 399-495 (677)
399 PRK14879 serine/threonine prot 99.6 3.1E-14 6.7E-19 88.5 9.4 86 16-120 44-129 (211)
400 KOG0983|consensus 99.6 1.5E-15 3.3E-20 96.3 3.3 108 1-122 120-228 (391)
401 KOG1006|consensus 99.6 6.5E-16 1.4E-20 97.5 1.6 112 1-122 92-204 (361)
402 KOG0695|consensus 99.6 5.6E-15 1.2E-19 96.4 5.1 106 1-121 278-386 (593)
403 PRK09605 bifunctional UGMP fam 99.5 4.8E-14 1E-18 98.5 8.3 83 15-120 380-462 (535)
404 KOG0664|consensus 99.5 2.7E-16 5.9E-21 99.9 -2.6 94 14-122 95-192 (449)
405 KOG1167|consensus 99.5 9E-14 2E-18 91.9 9.0 100 1-121 67-167 (418)
406 TIGR03724 arch_bud32 Kae1-asso 99.5 1.2E-13 2.7E-18 85.1 9.1 83 16-120 42-124 (199)
407 KOG0670|consensus 99.5 3.5E-14 7.6E-19 96.7 6.7 107 1-122 460-572 (752)
408 PRK12274 serine/threonine prot 99.5 2.6E-13 5.6E-18 84.0 8.3 79 17-121 47-127 (218)
409 PRK01723 3-deoxy-D-manno-octul 99.5 1.5E-13 3.2E-18 87.2 7.3 88 15-121 84-177 (239)
410 PHA02882 putative serine/threo 99.5 4E-13 8.7E-18 87.4 9.0 84 23-121 75-161 (294)
411 KOG0576|consensus 99.5 7.7E-15 1.7E-19 102.0 0.9 104 2-121 44-147 (829)
412 COG0515 SPS1 Serine/threonine 99.4 2E-12 4.4E-17 83.6 10.1 109 1-121 25-136 (384)
413 KOG1024|consensus 99.4 7.5E-13 1.6E-17 87.8 6.6 113 3-121 319-431 (563)
414 PLN03225 Serine/threonine-prot 99.4 1.2E-12 2.5E-17 92.1 7.3 77 43-121 206-290 (566)
415 smart00090 RIO RIO-like kinase 99.4 1.3E-12 2.7E-17 82.9 6.5 87 18-120 97-183 (237)
416 PLN00181 protein SPA1-RELATED; 99.4 2.5E-13 5.5E-18 98.6 3.0 81 26-120 27-114 (793)
417 KOG1163|consensus 99.4 5.4E-12 1.2E-16 79.2 8.3 102 1-120 43-145 (341)
418 KOG1164|consensus 99.4 5.3E-12 1.2E-16 83.3 8.7 106 2-121 48-157 (322)
419 cd05144 RIO2_C RIO kinase fami 99.4 2.6E-12 5.7E-17 79.3 6.2 80 17-121 79-160 (198)
420 cd05120 APH_ChoK_like Aminogly 99.3 7.1E-12 1.5E-16 73.4 7.3 98 1-121 24-124 (155)
421 KOG1165|consensus 99.3 6.2E-11 1.3E-15 77.4 8.4 103 1-121 56-159 (449)
422 KOG4158|consensus 99.2 5.8E-11 1.3E-15 79.3 4.8 76 29-120 274-375 (598)
423 cd05119 RIO RIO kinase family, 99.1 1.7E-10 3.8E-15 70.4 6.3 80 20-120 66-149 (187)
424 COG3642 Mn2+-dependent serine/ 99.1 7.2E-10 1.6E-14 67.2 7.6 85 15-121 43-127 (204)
425 KOG0590|consensus 99.1 6E-11 1.3E-15 83.9 1.8 86 20-121 370-455 (601)
426 KOG1166|consensus 99.1 3.1E-10 6.7E-15 83.1 5.4 74 33-121 756-829 (974)
427 KOG0195|consensus 99.0 6.3E-11 1.4E-15 75.8 1.5 108 3-121 218-326 (448)
428 KOG3087|consensus 99.0 1.8E-09 3.9E-14 65.6 7.0 95 14-121 53-148 (229)
429 cd05151 ChoK Choline Kinase (C 99.0 2.1E-09 4.5E-14 64.6 6.5 95 1-120 24-122 (170)
430 TIGR01982 UbiB 2-polyprenylphe 98.9 3.1E-09 6.7E-14 72.9 6.6 88 18-121 200-292 (437)
431 cd05146 RIO3_euk RIO kinase fa 98.9 4.5E-09 9.7E-14 64.8 6.7 82 20-121 75-160 (197)
432 KOG1243|consensus 98.9 8.4E-09 1.8E-13 72.6 8.1 90 14-122 52-141 (690)
433 PRK15123 lipopolysaccharide co 98.9 1.8E-08 3.8E-13 65.1 8.1 93 17-121 74-173 (268)
434 PF06293 Kdo: Lipopolysacchari 98.8 7.7E-08 1.7E-12 59.9 9.7 93 15-121 55-153 (206)
435 PRK04750 ubiB putative ubiquin 98.8 1.7E-08 3.7E-13 70.7 6.6 87 18-121 203-295 (537)
436 KOG1240|consensus 98.8 2E-09 4.3E-14 79.4 1.5 104 1-121 49-155 (1431)
437 KOG0603|consensus 98.8 2.8E-09 6.1E-14 74.2 1.7 105 2-121 26-132 (612)
438 KOG1266|consensus 98.8 6.7E-09 1.5E-13 68.1 3.2 89 25-121 121-213 (458)
439 KOG3741|consensus 98.8 5.4E-08 1.2E-12 67.3 7.6 101 18-120 320-427 (655)
440 KOG1023|consensus 98.7 8.7E-08 1.9E-12 66.1 6.3 84 25-121 1-84 (484)
441 cd05154 ACAD10_11_like Acyl-Co 98.6 5.1E-07 1.1E-11 56.3 7.5 62 1-62 25-90 (223)
442 PF01163 RIO1: RIO1 family; I 98.5 5E-07 1.1E-11 55.5 6.9 86 15-121 52-142 (188)
443 KOG0590|consensus 98.5 2.2E-08 4.8E-13 71.1 -0.9 95 14-122 63-160 (601)
444 KOG0601|consensus 98.3 2.9E-07 6.3E-12 63.9 1.8 91 16-121 310-401 (524)
445 smart00750 KIND kinase non-cat 98.3 2.6E-06 5.7E-11 51.3 5.5 46 57-121 1-46 (176)
446 PF06176 WaaY: Lipopolysacchar 98.2 1.3E-05 2.8E-10 50.4 7.0 54 46-121 117-170 (229)
447 PRK09902 hypothetical protein; 98.0 6.2E-05 1.3E-09 47.1 7.9 95 14-120 62-162 (216)
448 PF14531 Kinase-like: Kinase-l 98.0 1.9E-05 4.1E-10 51.6 5.2 68 47-122 114-181 (288)
449 PF10707 YrbL-PhoP_reg: PhoP r 98.0 0.00026 5.6E-09 44.1 9.8 88 14-121 54-153 (199)
450 cd05150 APH Aminoglycoside 3'- 97.7 0.00095 2.1E-08 42.5 9.3 46 16-62 36-82 (244)
451 KOG0601|consensus 97.6 5E-05 1.1E-09 53.2 3.0 92 15-121 161-257 (524)
452 PLN02876 acyl-CoA dehydrogenas 97.6 0.002 4.4E-08 48.1 11.2 44 14-58 81-130 (822)
453 COG0478 RIO-like serine/threon 97.4 0.00037 8.1E-09 45.3 4.9 85 14-122 152-238 (304)
454 KOG1033|consensus 97.4 6.7E-05 1.4E-09 52.1 0.9 62 46-121 330-391 (516)
455 PF12260 PIP49_C: Protein-kina 97.2 0.0024 5.3E-08 39.4 6.4 88 20-121 8-97 (188)
456 TIGR02172 Fb_sc_TIGR02172 Fibr 97.1 0.018 4E-07 36.5 9.6 43 15-58 36-80 (226)
457 KOG1235|consensus 97.0 0.0053 1.1E-07 43.7 7.5 68 33-121 266-336 (538)
458 COG0661 AarF Predicted unusual 96.6 0.011 2.4E-07 42.1 6.6 57 47-121 241-300 (517)
459 COG1718 RIO1 Serine/threonine 96.4 0.011 2.5E-07 38.1 5.0 83 20-121 117-202 (268)
460 cd05155 APH_ChoK_like_1 Unchar 96.2 0.071 1.5E-06 33.9 7.9 46 15-60 32-82 (235)
461 KOG0606|consensus 95.8 0.0043 9.2E-08 47.1 1.3 76 31-121 864-939 (1205)
462 KOG0606|consensus 95.7 0.0072 1.6E-07 46.0 2.1 25 94-120 153-177 (1205)
463 KOG2270|consensus 93.8 0.17 3.6E-06 35.2 4.6 84 20-120 215-299 (520)
464 COG3173 Predicted aminoglycosi 93.2 1.4 3E-05 29.8 8.0 43 14-56 64-109 (321)
465 KOG0576|consensus 92.9 0.045 9.8E-07 40.1 0.9 80 18-111 280-361 (829)
466 COG3001 Uncharacterized protei 92.9 1.7 3.8E-05 28.3 8.5 45 15-60 52-99 (286)
467 PHA03111 Ser/Thr kinase; Provi 92.2 0.27 5.8E-06 33.6 3.7 36 86-121 281-318 (444)
468 PRK10593 hypothetical protein; 91.7 2.3 5E-05 28.3 7.7 45 15-59 51-100 (297)
469 PF05445 Pox_ser-thr_kin: Poxv 91.0 0.12 2.6E-06 35.3 1.2 16 106-121 299-314 (434)
470 PF01636 APH: Phosphotransfera 89.5 3.1 6.8E-05 25.8 6.7 48 14-61 33-84 (239)
471 KOG2268|consensus 87.6 0.94 2E-05 31.2 3.4 82 15-121 154-237 (465)
472 cd05157 ETNK_euk Ethanolamine 87.6 4.2 9.2E-05 25.6 6.4 38 18-60 42-80 (235)
473 PF07387 Seadorna_VP7: Seadorn 85.5 0.7 1.5E-05 30.0 1.9 26 96-121 153-178 (308)
474 COG4248 Uncharacterized protei 85.1 1.8 3.9E-05 30.9 3.9 40 81-122 114-153 (637)
475 PRK10593 hypothetical protein; 85.0 0.52 1.1E-05 31.3 1.3 17 104-120 192-208 (297)
476 KOG1236|consensus 84.6 4.3 9.2E-05 29.0 5.4 59 47-120 320-379 (565)
477 cd05152 MPH2' Macrolide 2'-Pho 81.4 0.88 1.9E-05 29.9 1.3 16 106-121 186-201 (276)
478 cd05157 ETNK_euk Ethanolamine 81.1 0.82 1.8E-05 28.9 1.1 16 106-121 171-186 (235)
479 TIGR02721 ycfN_thiK thiamine k 81.0 0.89 1.9E-05 29.2 1.2 39 17-60 37-76 (256)
480 cd05156 ChoK_euk Choline Kinas 80.6 4 8.7E-05 26.9 4.2 40 16-60 45-85 (302)
481 PRK05231 homoserine kinase; Pr 78.4 0.99 2.1E-05 30.0 0.8 16 106-121 188-203 (319)
482 TIGR00938 thrB_alt homoserine 77.6 3.4 7.3E-05 27.4 3.1 16 106-121 188-203 (307)
483 TIGR02906 spore_CotS spore coa 77.3 5.2 0.00011 26.4 3.9 16 106-121 188-203 (313)
484 KOG1035|consensus 77.2 7.5 0.00016 31.3 5.0 78 15-104 226-306 (1351)
485 KOG4720|consensus 76.6 8.1 0.00017 26.4 4.5 61 19-104 126-187 (391)
486 PLN02756 S-methyl-5-thioribose 76.5 2.1 4.6E-05 30.0 2.0 39 15-56 78-119 (418)
487 cd05156 ChoK_euk Choline Kinas 75.7 9.7 0.00021 25.1 4.9 15 107-121 181-195 (302)
488 cd05153 HomoserineK_II Homoser 74.7 1.5 3.2E-05 28.8 0.8 45 15-59 50-101 (296)
489 PRK12396 5-methylribose kinase 73.6 1.5 3.3E-05 30.6 0.7 16 106-121 228-243 (409)
490 COG2112 Predicted Ser/Thr prot 73.4 20 0.00044 22.6 5.8 56 1-64 48-104 (201)
491 PRK09550 mtnK methylthioribose 73.3 2 4.3E-05 30.0 1.2 42 14-58 73-117 (401)
492 PLN02236 choline kinase 73.1 2.1 4.5E-05 29.1 1.3 37 19-60 84-121 (344)
493 KOG1093|consensus 73.1 14 0.00029 27.5 5.2 52 14-66 25-76 (725)
494 TIGR01767 MTRK 5-methylthiorib 71.6 2.1 4.6E-05 29.5 1.0 16 106-121 193-208 (370)
495 smart00587 CHK ZnF_C4 abd HLH 70.0 2.7 5.8E-05 26.1 1.2 16 106-121 121-136 (196)
496 KOG2137|consensus 70.0 2.6 5.6E-05 31.4 1.2 31 90-121 105-135 (700)
497 PTZ00384 choline kinase; Provi 69.2 20 0.00043 25.0 5.3 37 19-60 100-137 (383)
498 COG2334 Putative homoserine ki 67.2 3.4 7.3E-05 28.1 1.3 15 107-121 199-213 (331)
499 KOG2464|consensus 66.8 12 0.00025 24.3 3.6 37 84-121 137-173 (246)
500 PF07914 DUF1679: Protein of u 64.3 18 0.00039 25.5 4.4 66 20-104 115-188 (414)
No 1
>KOG0595|consensus
Probab=99.97 E-value=5e-30 Score=167.14 Aligned_cols=106 Identities=36% Similarity=0.587 Sum_probs=96.4
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||||.+.+.. ..+..+-+..|+.+|+.++|||||.+++++. +.+.+|+|||||.||+|..++...+.+++..+
T Consensus 38 VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~-~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~----- 111 (429)
T KOG0595|consen 38 VAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIE-DDDFIYLVMEYCNGGDLSDYIRRRGRLPEATA----- 111 (429)
T ss_pred EEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEe-cCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHH-----
Confidence 6899888763 5667788899999999999999999999998 88899999999999999999998776666666
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.++.|++.|+.+||+++ |+||||||+||||+.
T Consensus 112 -------r~Fm~QLA~alq~L~~~~--IiHRDLKPQNiLLs~ 144 (429)
T KOG0595|consen 112 -------RHFMQQLASALQFLHENN--IIHRDLKPQNILLST 144 (429)
T ss_pred -------HHHHHHHHHHHHHHHHCC--eeeccCCcceEEecc
Confidence 999999999999999999 999999999999975
No 2
>KOG0615|consensus
Probab=99.96 E-value=5.1e-29 Score=162.86 Aligned_cols=106 Identities=30% Similarity=0.445 Sum_probs=93.0
Q ss_pred CeeeeccCCCCCc------chHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNLNLP------FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~~~~------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||||++++....+ ......+|+++|++++|||||+++++|+ ..++.|||+||++||+|.+++-.++.+.++..
T Consensus 200 vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~-~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~ 278 (475)
T KOG0615|consen 200 VAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFE-VPDSSYMVLEYVEGGELFDKVVANKYLREDLG 278 (475)
T ss_pred EEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeee-cCCceEEEEEEecCccHHHHHHhccccccchh
Confidence 6999999763211 1233469999999999999999999998 77888999999999999999998888777777
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+++|++.|+.|||+.| |+||||||+|||+..
T Consensus 279 ------------K~~f~Qll~avkYLH~~G--I~HRDiKPeNILl~~ 311 (475)
T KOG0615|consen 279 ------------KLLFKQLLTAVKYLHSQG--IIHRDIKPENILLSN 311 (475)
T ss_pred ------------HHHHHHHHHHHHHHHHcC--cccccCCcceEEecc
Confidence 899999999999999999 999999999999964
No 3
>KOG0581|consensus
Probab=99.94 E-value=6.3e-27 Score=151.14 Aligned_cols=107 Identities=29% Similarity=0.451 Sum_probs=93.4
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|++..+.++...+++.+|+++++.++||+||.+||+|..+....+++||||++|+|..+++..+ .
T Consensus 107 ~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g------------~ 174 (364)
T KOG0581|consen 107 YALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVG------------R 174 (364)
T ss_pred EEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcC------------C
Confidence 5899997777777889999999999999999999999999833336999999999999999998643 3
Q ss_pred CChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~ 121 (122)
+++..+-.++.+++.|+.|||+ .+ |+|||+||+|||+++
T Consensus 175 i~E~~L~~ia~~VL~GL~YLh~~~~--IIHRDIKPsNlLvNs 214 (364)
T KOG0581|consen 175 IPEPVLGKIARAVLRGLSYLHEERK--IIHRDIKPSNLLVNS 214 (364)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhccC--eeeccCCHHHeeecc
Confidence 5556668999999999999996 66 999999999999975
No 4
>KOG0575|consensus
Probab=99.94 E-value=1.4e-26 Score=157.00 Aligned_cols=107 Identities=36% Similarity=0.572 Sum_probs=96.5
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|++.+. .++...++..+|+++.+.++|||||+++++|+ +.+++||+.|.|..++|..+++..+.+.+.++
T Consensus 46 ~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FE-Ds~nVYivLELC~~~sL~el~Krrk~ltEpEa---- 120 (592)
T KOG0575|consen 46 VAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFE-DSNNVYIVLELCHRGSLMELLKRRKPLTEPEA---- 120 (592)
T ss_pred EEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEee-cCCceEEEEEecCCccHHHHHHhcCCCCcHHH----
Confidence 699999986 35667899999999999999999999999999 88999999999999999999997655555444
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
..+++||+.|+.|||+.+ |+|||||..|+||+++
T Consensus 121 --------ry~l~QIv~GlkYLH~~~--IiHRDLKLGNlfL~~~ 154 (592)
T KOG0575|consen 121 --------RYFLRQIVEGLKYLHSLG--IIHRDLKLGNLFLNEN 154 (592)
T ss_pred --------HHHHHHHHHHHHHHHhcC--ceecccchhheeecCc
Confidence 999999999999999999 9999999999999864
No 5
>KOG0192|consensus
Probab=99.94 E-value=4e-26 Score=151.07 Aligned_cols=110 Identities=24% Similarity=0.395 Sum_probs=92.3
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||||++.... +....+++.+|+.+|.+++||||+.++|+|......+++||||+++|+|.+++... ...
T Consensus 68 vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~----------~~~ 137 (362)
T KOG0192|consen 68 VAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKK----------RKR 137 (362)
T ss_pred EEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhc----------ccC
Confidence 5899988763 22236789999999999999999999999983333789999999999999999763 123
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.+++.||.|||+.++ |+||||||+|+|++.
T Consensus 138 ~l~~~~~l~~aldiArGm~YLH~~~~-iIHrDLK~~NiLv~~ 178 (362)
T KOG0192|consen 138 KLPLKVRLRIALDIARGMEYLHSEGP-IIHRDLKSDNILVDL 178 (362)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCC-eeecccChhhEEEcC
Confidence 55666679999999999999999875 899999999999975
No 6
>KOG1187|consensus
Probab=99.94 E-value=7.6e-26 Score=150.14 Aligned_cols=110 Identities=29% Similarity=0.356 Sum_probs=93.1
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCC-eEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||||.+....... ...|.+|+.++.+++|||++.++|+|. +.+ ..++|+|||++|+|.+.+..... .
T Consensus 102 vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~-e~~~~~~LVYEym~nGsL~d~L~~~~~---------~- 169 (361)
T KOG1187|consen 102 VAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGYCL-EGGEHRLLVYEYMPNGSLEDHLHGKKG---------E- 169 (361)
T ss_pred EEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEEEe-cCCceEEEEEEccCCCCHHHHhCCCCC---------C-
Confidence 6899888764332 455999999999999999999999998 555 58899999999999998875321 1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCcccccC
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~~ 122 (122)
++.|..+..++.+++.|+.|||.. .++|+|||+||+|||||++
T Consensus 170 ~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~ 213 (361)
T KOG1187|consen 170 PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDED 213 (361)
T ss_pred CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCC
Confidence 668889999999999999999995 4589999999999999964
No 7
>KOG0598|consensus
Probab=99.93 E-value=7.7e-26 Score=145.99 Aligned_cols=106 Identities=31% Similarity=0.434 Sum_probs=96.0
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|++++. ...+..+....|..+|..++||.||.++..|+ +...+|+|+||+.||.|...+...+.+.+..+
T Consensus 53 YAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQ-t~~kLylVld~~~GGeLf~hL~~eg~F~E~~a---- 127 (357)
T KOG0598|consen 53 YAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQ-TEEKLYLVLDYLNGGELFYHLQREGRFSEDRA---- 127 (357)
T ss_pred eehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecc-cCCeEEEEEeccCCccHHHHHHhcCCcchhHH----
Confidence 588998876 24456788899999999999999999999999 88999999999999999999998777777666
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..|+.+|+.|+.|||+.+ |+|||+||+||||+.
T Consensus 128 --------rfYlaEi~lAL~~LH~~g--IiyRDlKPENILLd~ 160 (357)
T KOG0598|consen 128 --------RFYLAEIVLALGYLHSKG--IIYRDLKPENILLDE 160 (357)
T ss_pred --------HHHHHHHHHHHHHHHhCC--eeeccCCHHHeeecC
Confidence 899999999999999999 999999999999985
No 8
>KOG1026|consensus
Probab=99.93 E-value=1e-25 Score=157.38 Aligned_cols=118 Identities=25% Similarity=0.388 Sum_probs=103.0
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh--cC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC--LS 78 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~--~~ 78 (122)
||||.++...+.+..++|.+|+++++.++|||||+++|+|. .++.+|||+|||..|+|.+||..+.+........ .+
T Consensus 519 VAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~-~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~ 597 (774)
T KOG1026|consen 519 VAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCR-EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTP 597 (774)
T ss_pred hhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc-cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCC
Confidence 79999998876668899999999999999999999999999 8899999999999999999999876533322111 14
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.++...+.+.++.||+.||.||-+.. ++||||.++|+|+.+
T Consensus 598 ~~L~~~q~L~iA~QIAaGM~YLs~~~--FVHRDLATRNCLVge 638 (774)
T KOG1026|consen 598 PPLSTSQFLHIATQIAAGMEYLSSHH--FVHRDLATRNCLVGE 638 (774)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCc--ccccchhhhhceecc
Confidence 45778899999999999999999998 999999999999975
No 9
>KOG0611|consensus
Probab=99.93 E-value=1e-25 Score=148.34 Aligned_cols=107 Identities=32% Similarity=0.534 Sum_probs=96.1
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||||.++++. ++.+.-++.+|++++..++||||+++|.+|+ +.+.+.+||||..+|.|.+++...+.+++..+
T Consensus 81 VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFE-NkdKIvivMEYaS~GeLYDYiSer~~LsErEa---- 155 (668)
T KOG0611|consen 81 VAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFE-NKDKIVIVMEYASGGELYDYISERGSLSEREA---- 155 (668)
T ss_pred eehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhc-CCceEEEEEEecCCccHHHHHHHhccccHHHH----
Confidence 6899998873 4445667789999999999999999999999 88889999999999999999998877777766
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
..+++||+.++.|+|.++ ++|||||.+|||+|.+
T Consensus 156 --------RhfFRQIvSAVhYCHknr--VvHRDLKLENILLD~N 189 (668)
T KOG0611|consen 156 --------RHFFRQIVSAVHYCHKNR--VVHRDLKLENILLDQN 189 (668)
T ss_pred --------HHHHHHHHHHHHHHhhcc--ceecccchhheeecCC
Confidence 999999999999999999 9999999999999853
No 10
>KOG0197|consensus
Probab=99.93 E-value=4.1e-25 Score=147.83 Aligned_cols=107 Identities=26% Similarity=0.303 Sum_probs=92.4
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.++.+ .-..++|.+|+++|++++|++||+++++|. .++.++||||||+.|+|.++++.... ..
T Consensus 233 vavk~ik~~--~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~-~~~piyIVtE~m~~GsLl~yLr~~~~----------~~ 299 (468)
T KOG0197|consen 233 VAVKTIKEG--SMSPEAFLREAQIMKKLRHEKLVKLYGVCT-KQEPIYIVTEYMPKGSLLDYLRTREG----------GL 299 (468)
T ss_pred ccceEEecc--ccChhHHHHHHHHHHhCcccCeEEEEEEEe-cCCceEEEEEecccCcHHHHhhhcCC----------Cc
Confidence 688888876 334588999999999999999999999998 65689999999999999999997322 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
+...+.+.++.|||+||+||++++ ++||||.++|||++++
T Consensus 300 l~~~~Ll~~a~qIaeGM~YLes~~--~IHRDLAARNiLV~~~ 339 (468)
T KOG0197|consen 300 LNLPQLLDFAAQIAEGMAYLESKN--YIHRDLAARNILVDED 339 (468)
T ss_pred cchHHHHHHHHHHHHHHHHHHhCC--ccchhhhhhheeeccC
Confidence 444566999999999999999999 9999999999999864
No 11
>KOG0592|consensus
Probab=99.92 E-value=3e-25 Score=149.33 Aligned_cols=107 Identities=33% Similarity=0.423 Sum_probs=94.4
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
+|||++.+. .++.-..-.-+|-..|.++ .||+|++++..|+ +...+|+|+||+++|+|.++++.-+.+.+.++
T Consensus 101 YAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQ-D~~sLYFvLe~A~nGdll~~i~K~Gsfde~ca--- 176 (604)
T KOG0592|consen 101 YAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQ-DEESLYFVLEYAPNGDLLDLIKKYGSFDETCA--- 176 (604)
T ss_pred eeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEee-cccceEEEEEecCCCcHHHHHHHhCcchHHHH---
Confidence 588888876 2333345556788889999 8999999999999 88899999999999999999999888888888
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
+.|+.+|+.+++|||+.| |+||||||+||||+++
T Consensus 177 ---------R~YAAeIldAleylH~~G--IIHRDlKPENILLd~d 210 (604)
T KOG0592|consen 177 ---------RFYAAEILDALEYLHSNG--IIHRDLKPENILLDKD 210 (604)
T ss_pred ---------HHHHHHHHHHHHHHHhcC--ceeccCChhheeEcCC
Confidence 899999999999999999 9999999999999864
No 12
>KOG0583|consensus
Probab=99.92 E-value=1.3e-24 Score=144.59 Aligned_cols=106 Identities=30% Similarity=0.506 Sum_probs=90.9
Q ss_pred CeeeeccCCC----CCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNL----NLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~----~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
||+|++.+.. .....+.+.+|+.+++.+. ||||++++.++. ....+++||||+.||+|.+++...+.+.+..+
T Consensus 45 vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~-t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~a- 122 (370)
T KOG0583|consen 45 VAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA-TPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEA- 122 (370)
T ss_pred EEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe-cCCeEEEEEEecCCccHHHHHHHcCCCChHHH-
Confidence 6899777641 1134556678999999998 999999999998 66669999999999999999998666666555
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..++.|++.|+.|+|+.+ ++||||||+|||++.
T Consensus 123 -----------r~~F~Qlisav~y~H~~g--i~HRDLK~ENilld~ 155 (370)
T KOG0583|consen 123 -----------RKYFRQLISAVAYCHSRG--IVHRDLKPENILLDG 155 (370)
T ss_pred -----------HHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEecC
Confidence 899999999999999999 999999999999985
No 13
>KOG0616|consensus
Probab=99.92 E-value=4.3e-25 Score=139.68 Aligned_cols=107 Identities=34% Similarity=0.521 Sum_probs=95.5
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|++.+. .+-+..++..+|.++|+.+.||.++.+++.+. +.+.++|+|||.+||.|.++++..+.+++..+
T Consensus 72 YAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~-d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~a---- 146 (355)
T KOG0616|consen 72 YAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK-DNSNLYMVMEYVPGGELFSYLRKSGRFSEPHA---- 146 (355)
T ss_pred eehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeec-cCCeEEEEEeccCCccHHHHHHhcCCCCchhH----
Confidence 578888876 24456788999999999999999999999999 88999999999999999999998766666555
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
+.++.|++.|++|||+.+ |++|||||+|||+|.+
T Consensus 147 --------rFYAAeivlAleylH~~~--iiYRDLKPENiLlD~~ 180 (355)
T KOG0616|consen 147 --------RFYAAEIVLALEYLHSLD--IIYRDLKPENLLLDQN 180 (355)
T ss_pred --------HHHHHHHHHHHHHHHhcC--eeeccCChHHeeeccC
Confidence 999999999999999999 9999999999999863
No 14
>KOG0600|consensus
Probab=99.92 E-value=2.7e-24 Score=143.74 Aligned_cols=107 Identities=28% Similarity=0.431 Sum_probs=92.8
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|.+.-. ..++......|||.+|++++||||+.+.+..+.. ...+|||+|||+ .+|.-++... .
T Consensus 145 vALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMd-hDL~GLl~~p-----------~ 212 (560)
T KOG0600|consen 145 VALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMD-HDLSGLLSSP-----------G 212 (560)
T ss_pred EEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEeccc-chhhhhhcCC-----------C
Confidence 688888765 4677888899999999999999999999999844 478999999998 7888777642 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
-.+.+.++..++.|++.|+.|+|+.+ ++|||||.+||||+.
T Consensus 213 vkft~~qIKc~mkQLl~Gl~~cH~~g--vlHRDIK~SNiLidn 253 (560)
T KOG0600|consen 213 VKFTEPQIKCYMKQLLEGLEYCHSRG--VLHRDIKGSNILIDN 253 (560)
T ss_pred cccChHHHHHHHHHHHHHHHHHhhcC--eeeccccccceEEcC
Confidence 35667788999999999999999999 999999999999985
No 15
>KOG0610|consensus
Probab=99.92 E-value=1.9e-24 Score=141.64 Aligned_cols=109 Identities=29% Similarity=0.452 Sum_probs=92.4
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|++.+.. +.+...+...|.++|+.++||.++.+|..|+ +....|++||||+||+|..+++... .
T Consensus 105 fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fe-t~~~~cl~meyCpGGdL~~LrqkQp----------~ 173 (459)
T KOG0610|consen 105 FAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFE-TDKYSCLVMEYCPGGDLHSLRQKQP----------G 173 (459)
T ss_pred EEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheee-ccceeEEEEecCCCccHHHHHhhCC----------C
Confidence 5899998873 2334566677889999999999999999999 7889999999999999999887642 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
.-+++..++.|+.+++-|++|||..| |+.|||||+|||+-++
T Consensus 174 ~~fse~~aRFYaAEvl~ALEYLHmlG--ivYRDLKPENILvred 215 (459)
T KOG0610|consen 174 KRFSESAARFYAAEVLLALEYLHMLG--IVYRDLKPENILVRED 215 (459)
T ss_pred CccchhhHHHHHHHHHHHHHHHHhhc--eeeccCCcceeEEecC
Confidence 34555566999999999999999999 9999999999998653
No 16
>KOG0593|consensus
Probab=99.91 E-value=9.7e-25 Score=138.76 Aligned_cols=106 Identities=25% Similarity=0.384 Sum_probs=87.4
Q ss_pred CeeeeccCCCC-CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLN-LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||||.+....+ +...+-++||+++|++++|+|+|.+..+|. ....+++|+|||+. ++.+-+.... .
T Consensus 30 VAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFr-rkrklhLVFE~~dh-TvL~eLe~~p-----------~ 96 (396)
T KOG0593|consen 30 VAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFR-RKRKLHLVFEYCDH-TVLHELERYP-----------N 96 (396)
T ss_pred EEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHH-hcceeEEEeeecch-HHHHHHHhcc-----------C
Confidence 68999987754 334566689999999999999999999998 78899999999984 5544444321 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..++..+..+++|++.|+.|+|+++ ++|||+||+|||++.
T Consensus 97 G~~~~~vk~~l~Q~l~ai~~cHk~n--~IHRDIKPENILit~ 136 (396)
T KOG0593|consen 97 GVPSELVKKYLYQLLKAIHFCHKNN--CIHRDIKPENILITQ 136 (396)
T ss_pred CCCHHHHHHHHHHHHHHhhhhhhcC--eecccCChhheEEec
Confidence 3444556899999999999999999 999999999999975
No 17
>KOG0591|consensus
Probab=99.91 E-value=6.1e-25 Score=138.55 Aligned_cols=113 Identities=24% Similarity=0.391 Sum_probs=92.6
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceee-eeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYD-VFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~-~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||.|.++-+ .+.+.+++...|+.+|++++||||+++++ .+..+...++++||+|++|+|.+.++..+. ..
T Consensus 47 ~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~--------qk 118 (375)
T KOG0591|consen 47 VALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKK--------QK 118 (375)
T ss_pred hhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHh--------cc
Confidence 355555533 45667889999999999999999999999 555355558899999999999999986432 34
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCC--eeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPP--VIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~--i~h~dlk~~nill~~ 121 (122)
..++++.+|.++.|++.|+.++|++-++ ++||||||.||+++.
T Consensus 119 r~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~ 163 (375)
T KOG0591|consen 119 RLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTA 163 (375)
T ss_pred ccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcC
Confidence 5678889999999999999999995444 999999999999974
No 18
>KOG0588|consensus
Probab=99.90 E-value=1e-23 Score=144.84 Aligned_cols=106 Identities=33% Similarity=0.540 Sum_probs=96.3
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|||++.+. ..+.....+.+|+-+|+.+.|||++.+|++++ +...+|++.||+++|.|.+++-..+++++..+
T Consensus 40 aaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe-~~~~lylvlEyv~gGELFdylv~kG~l~e~ea---- 114 (786)
T KOG0588|consen 40 AAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWE-NKQHLYLVLEYVPGGELFDYLVRKGPLPEREA---- 114 (786)
T ss_pred eEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeec-cCceEEEEEEecCCchhHHHHHhhCCCCCHHH----
Confidence 489999887 34456788899999999999999999999999 88899999999999999999998877776666
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..++.||+.|+.|+|..+ |.||||||+|+||+.
T Consensus 115 --------a~ff~QIi~gv~yCH~~~--icHRDLKpENlLLd~ 147 (786)
T KOG0588|consen 115 --------AHFFRQILDGVSYCHAFN--ICHRDLKPENLLLDV 147 (786)
T ss_pred --------HHHHHHHHHHHHHHhhhc--ceeccCCchhhhhhc
Confidence 999999999999999999 999999999999985
No 19
>KOG0198|consensus
Probab=99.90 E-value=2.5e-23 Score=134.88 Aligned_cols=107 Identities=24% Similarity=0.357 Sum_probs=88.4
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCC-eEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
.|||......... .+.+.+|+.+|.+++|||||+++|......+ .++++|||+++|+|.+++...+.
T Consensus 45 ~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~----------- 112 (313)
T KOG0198|consen 45 MAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGG----------- 112 (313)
T ss_pred eeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCC-----------
Confidence 3666666542222 6778999999999999999999998542333 68899999999999999987542
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+++..+..+..|+++|+.|||+++ ++|+||||+|||++.
T Consensus 113 ~l~E~~v~~ytr~iL~GL~ylHs~g--~vH~DiK~~NiLl~~ 152 (313)
T KOG0198|consen 113 KLPEPLVRRYTRQILEGLAYLHSKG--IVHCDIKPANILLDP 152 (313)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC--EeccCcccceEEEeC
Confidence 3556666999999999999999999 999999999999975
No 20
>KOG0582|consensus
Probab=99.90 E-value=3.5e-23 Score=136.92 Aligned_cols=109 Identities=22% Similarity=0.243 Sum_probs=94.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||||++.-..-......+.+|+..++.++||||+.++.+|. ....+|+||.||++|++.++++..-+ ..
T Consensus 54 VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFv-v~~~LWvVmpfMa~GS~ldIik~~~~----------~G 122 (516)
T KOG0582|consen 54 VAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFV-VDSELWVVMPFMAGGSLLDIIKTYYP----------DG 122 (516)
T ss_pred EEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEE-ecceeEEeehhhcCCcHHHHHHHHcc----------cc
Confidence 68999986532334688899999999999999999999998 77889999999999999999987433 34
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
+.+..+..+.++++.|+.|||++| .+|||+|+.|||++.+
T Consensus 123 l~E~~Ia~iLre~LkaL~YLH~~G--~IHRdvKAgnILi~~d 162 (516)
T KOG0582|consen 123 LEEASIATILREVLKALDYLHQNG--HIHRDVKAGNILIDSD 162 (516)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcC--ceecccccccEEEcCC
Confidence 566677999999999999999999 9999999999999864
No 21
>KOG0594|consensus
Probab=99.90 E-value=6.7e-23 Score=131.90 Aligned_cols=111 Identities=27% Similarity=0.424 Sum_probs=93.3
Q ss_pred CeeeeccCCCC-CcchHHHHHHHHHHhhCCCCC-ccceeeeeeeCCC-----eEEEEEeccCCCCHHHHHHhccchhHHh
Q psy4991 1 MCAKLLTTNLN-LPFPRHALREYNIHKALDHPR-VVKLYDVFEIDAN-----SFCTVLEYCDGHDLDFYLKQHKTIAERE 73 (122)
Q Consensus 1 vavK~~~~~~~-~~~~~~~~~e~~~l~~~~h~~-i~~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 73 (122)
||+|.+.-... ++......+|+.+++.++|+| |+.+++++.+... .+++++||+. .+|..+++......
T Consensus 39 VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~--- 114 (323)
T KOG0594|consen 39 VALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPKKP--- 114 (323)
T ss_pred EEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeec-ccHHHHHHhccccc---
Confidence 68999887743 667888999999999999999 9999999974442 8899999998 89999998754311
Q ss_pred hhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
..++...++.++.|++.|+.|||+.+ |+||||||+||+++++
T Consensus 115 -----~g~~~~~ik~~m~Qll~gl~~~H~~~--IlHRDLKPQNlLi~~~ 156 (323)
T KOG0594|consen 115 -----QGLPPRLIKSFMRQLLRGLAFLHSHG--ILHRDLKPQNLLISSS 156 (323)
T ss_pred -----cCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCcceEEECCC
Confidence 23444667999999999999999999 9999999999999863
No 22
>KOG0659|consensus
Probab=99.90 E-value=3.1e-23 Score=129.64 Aligned_cols=107 Identities=25% Similarity=0.423 Sum_probs=93.0
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||||.++.+ .+++......||+.+|+.++|+||+.+.++|. ..+.+.+|+||++ .+|...++... .
T Consensus 30 VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~-~~~~l~lVfEfm~-tdLe~vIkd~~-----------i 96 (318)
T KOG0659|consen 30 VAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFP-HKSNLSLVFEFMP-TDLEVVIKDKN-----------I 96 (318)
T ss_pred EEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhcc-CCCceEEEEEecc-ccHHHHhcccc-----------c
Confidence 689999876 35567788999999999999999999999998 6778889999998 89999988642 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
.+.+..+..|+.+++.|+.|+|++. |+|||+||.|+|++++
T Consensus 97 ~l~pa~iK~y~~m~LkGl~y~H~~~--IlHRDlKPnNLLis~~ 137 (318)
T KOG0659|consen 97 ILSPADIKSYMLMTLKGLAYCHSKW--ILHRDLKPNNLLISSD 137 (318)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhhh--hhcccCCccceEEcCC
Confidence 4455566999999999999999999 9999999999999853
No 23
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.90 E-value=7.6e-23 Score=134.92 Aligned_cols=119 Identities=18% Similarity=0.290 Sum_probs=92.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhH--------
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE-------- 71 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~-------- 71 (122)
||+|.++........+.+.+|+.++..+ +||||+.+++++......++++|||+++|+|.+++........
T Consensus 40 vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~ 119 (338)
T cd05102 40 VAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPK 119 (338)
T ss_pred hheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchh
Confidence 6888887654444456789999999999 8999999999987455678899999999999999875321100
Q ss_pred ------------------------------------------HhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeee
Q psy4991 72 ------------------------------------------REARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIH 109 (122)
Q Consensus 72 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h 109 (122)
........++.+..+..++.|++.|+.|||+.+ ++|
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH 197 (338)
T cd05102 120 QRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRK--CIH 197 (338)
T ss_pred hhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCC--EEC
Confidence 000001234667788899999999999999999 999
Q ss_pred eCCCCCCccccc
Q psy4991 110 YDLKPGKPLFLF 121 (122)
Q Consensus 110 ~dlk~~nill~~ 121 (122)
|||||+||+++.
T Consensus 198 rDiKp~Nil~~~ 209 (338)
T cd05102 198 RDLAARNILLSE 209 (338)
T ss_pred CCCccceEEEcC
Confidence 999999999975
No 24
>KOG0661|consensus
Probab=99.89 E-value=5.4e-24 Score=141.52 Aligned_cols=105 Identities=24% Similarity=0.409 Sum_probs=89.4
Q ss_pred CeeeeccCCCCCcchHHH-HHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNLNLPFPRHA-LREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~-~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||||.+++.... +.+.. +||+.-|++++ ||||+.+.+++.+....+++|||||. ..|.++++.++
T Consensus 38 VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R~----------- 104 (538)
T KOG0661|consen 38 VAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMD-CNLYQLMKDRN----------- 104 (538)
T ss_pred eeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhh-hhHHHHHhhcC-----------
Confidence 688988877322 33333 78999999997 99999999999844448999999998 89999998742
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
..+++..+..|++||++|+.|+|..| +.|||+||+|||+.
T Consensus 105 r~fse~~irnim~QilqGL~hiHk~G--fFHRDlKPENiLi~ 144 (538)
T KOG0661|consen 105 RLFSESDIRNIMYQILQGLAHIHKHG--FFHRDLKPENILIS 144 (538)
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHhcC--cccccCChhheEec
Confidence 45677778999999999999999999 99999999999987
No 25
>KOG0663|consensus
Probab=99.89 E-value=5.6e-23 Score=132.12 Aligned_cols=108 Identities=30% Similarity=0.496 Sum_probs=93.3
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeee-eCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFE-IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|.++.. .+.+..-..+||+.+|.+++||||+.+..+.. .+.+.+|||||||+ .+|..++..-+
T Consensus 104 VALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~E-hDLksl~d~m~----------- 171 (419)
T KOG0663|consen 104 VALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVE-HDLKSLMETMK----------- 171 (419)
T ss_pred EEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHH-hhHHHHHHhcc-----------
Confidence 689999876 45668888899999999999999999999986 23467999999998 89999988632
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
+++...++..++.|++.|+.|||... |+||||||+|+|++++
T Consensus 172 q~F~~~evK~L~~QlL~glk~lH~~w--ilHRDLK~SNLLm~~~ 213 (419)
T KOG0663|consen 172 QPFLPGEVKTLMLQLLRGLKHLHDNW--ILHRDLKTSNLLLSHK 213 (419)
T ss_pred CCCchHHHHHHHHHHHHHHHHHhhce--eEecccchhheeeccC
Confidence 45666677999999999999999999 9999999999999753
No 26
>KOG0194|consensus
Probab=99.89 E-value=3.6e-23 Score=139.81 Aligned_cols=107 Identities=25% Similarity=0.415 Sum_probs=92.5
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||||..+.. ........+++|++++++++|+||+.+||++. ....++++||+|.||+|.++|+..+.
T Consensus 189 VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~-~~~Pl~ivmEl~~gGsL~~~L~k~~~---------- 257 (474)
T KOG0194|consen 189 VAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV-LEEPLMLVMELCNGGSLDDYLKKNKK---------- 257 (474)
T ss_pred eEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-CCCccEEEEEecCCCcHHHHHHhCCC----------
Confidence 688888852 34456788999999999999999999999998 77889999999999999999998653
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.++..+...++.+.+.||.|||+++ ++||||..+|+|++.
T Consensus 258 -~v~~~ek~~~~~~AA~Gl~YLh~k~--~IHRDIAARNcL~~~ 297 (474)
T KOG0194|consen 258 -SLPTLEKLRFCYDAARGLEYLHSKN--CIHRDIAARNCLYSK 297 (474)
T ss_pred -CCCHHHHHHHHHHHHhHHHHHHHCC--CcchhHhHHHheecC
Confidence 2333444899999999999999999 999999999999975
No 27
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.89 E-value=1.9e-22 Score=129.20 Aligned_cols=107 Identities=24% Similarity=0.324 Sum_probs=90.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.++...+......+.+|+..+++++||||+++++.+. ..+..+++|||+++|+|.+++.... ..
T Consensus 36 vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~ 103 (266)
T cd05064 36 VAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT-RGNTMMIVTEYMSNGALDSFLRKHE-----------GQ 103 (266)
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe-cCCCcEEEEEeCCCCcHHHHHHhCC-----------CC
Confidence 57788776644444567889999999999999999999998 6778999999999999999887532 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+|+||+||+++.
T Consensus 104 l~~~~~~~~~~~i~~al~~lH~~~--iiH~dikp~nili~~ 142 (266)
T cd05064 104 LVAGQLMGMLPGLASGMKYLSEMG--YVHKGLAAHKVLVNS 142 (266)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--EeeccccHhhEEEcC
Confidence 456667999999999999999999 999999999999975
No 28
>KOG0607|consensus
Probab=99.89 E-value=2.8e-23 Score=133.28 Aligned_cols=105 Identities=28% Similarity=0.391 Sum_probs=93.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|||++.+.... .+.+..+|++++.++ .|+||++++.+|+ +...+|+|||.|.||+|.+.+.++..+.+..+
T Consensus 106 YAVKiidKq~gH-sR~RvfREVe~f~~Cqgh~nilqLiefFE-dd~~FYLVfEKm~GGplLshI~~~~~F~E~EA----- 178 (463)
T KOG0607|consen 106 YAVKIIDKQPGH-SRSRVFREVETFYQCQGHKNILQLIEFFE-DDTRFYLVFEKMRGGPLLSHIQKRKHFNEREA----- 178 (463)
T ss_pred hhhhhhhcCCch-HHHHHHHHHHHHHHhcCCccHHHHHHHhc-ccceEEEEEecccCchHHHHHHHhhhccHHHH-----
Confidence 589998877332 567889999999999 6999999999999 77889999999999999999988888777777
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+...|+.|+.|||.+| |.|||+||+|||..+
T Consensus 179 -------s~vvkdia~aLdFlH~kg--IAHRDlKPENiLC~~ 211 (463)
T KOG0607|consen 179 -------SRVVKDIASALDFLHTKG--IAHRDLKPENILCES 211 (463)
T ss_pred -------HHHHHHHHHHHHHHhhcC--cccccCCccceeecC
Confidence 889999999999999999 999999999999754
No 29
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.89 E-value=1.2e-22 Score=133.51 Aligned_cols=106 Identities=27% Similarity=0.387 Sum_probs=88.9
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|+++... .......+.+|+.+++.++||||+.+++.+. ..+..+++|||+.+++|...+...+.+
T Consensus 23 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~--------- 92 (323)
T cd05571 23 YAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRERVF--------- 92 (323)
T ss_pred EEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEE-cCCEEEEEEeCCCCCcHHHHHHHcCCC---------
Confidence 5788887542 2334466788999999999999999999998 778899999999999998888764433
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 93 ---~~~~~~~~~~qi~~~L~~lH~~~--ivHrDlkp~NIll~~ 130 (323)
T cd05571 93 ---SEDRARFYGAEIVSALGYLHSCD--VVYRDLKLENLMLDK 130 (323)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECC
Confidence 44455889999999999999999 999999999999975
No 30
>KOG0580|consensus
Probab=99.89 E-value=6.3e-24 Score=131.00 Aligned_cols=108 Identities=27% Similarity=0.419 Sum_probs=91.5
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|++.+.. ..+..+.+.+|+++...++||||+++|++|- +....|+++||..+|++...+...+.
T Consensus 50 valKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fh-d~~riyLilEya~~gel~k~L~~~~~---------- 118 (281)
T KOG0580|consen 50 VALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFH-DSKRIYLILEYAPRGELYKDLQEGRM---------- 118 (281)
T ss_pred EEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhee-ccceeEEEEEecCCchHHHHHHhccc----------
Confidence 6899998762 3345677899999999999999999999998 88899999999999999999984322
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+.....++.|++.|+.|+|.++ ++|||+||+|+|++.
T Consensus 119 ~~f~e~~~a~Yi~q~A~Al~y~h~k~--VIhRdiKpenlLlg~ 159 (281)
T KOG0580|consen 119 KRFDEQRAATYIKQLANALLYCHLKR--VIHRDIKPENLLLGS 159 (281)
T ss_pred ccccccchhHHHHHHHHHHHHhccCC--cccCCCCHHHhccCC
Confidence 22333344899999999999999999 999999999999975
No 31
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.89 E-value=9.6e-23 Score=136.32 Aligned_cols=106 Identities=26% Similarity=0.325 Sum_probs=88.4
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|++.... .....+.+.+|+.+++.++||||+++++++. +....+++|||+++|+|.+++...+.+
T Consensus 29 ~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~~--------- 98 (377)
T cd05629 29 YAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQ-DAQYLYLIMEFLPGGDLMTMLIKYDTF--------- 98 (377)
T ss_pred EEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEE-cCCeeEEEEeCCCCCcHHHHHHhcCCC---------
Confidence 5788776531 2234466788999999999999999999998 778899999999999999988764433
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 99 ---~~~~~~~~~~ql~~aL~~LH~~g--ivHrDlkp~NIll~~ 136 (377)
T cd05629 99 ---SEDVTRFYMAECVLAIEAVHKLG--FIHRDIKPDNILIDR 136 (377)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECC
Confidence 34455889999999999999999 999999999999964
No 32
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.89 E-value=2.2e-22 Score=131.02 Aligned_cols=118 Identities=25% Similarity=0.398 Sum_probs=93.1
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh------
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA------ 74 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~------ 74 (122)
||+|.+...........+.+|+.++.+++|+||+++++++. +.+..++++||+.+|+|.+++...........
T Consensus 49 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 127 (304)
T cd05096 49 VAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCV-DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVP 127 (304)
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe-cCCceEEEEecCCCCcHHHHHHhccccccccccccccc
Confidence 47888776543334567889999999999999999999998 66778999999999999999875322111100
Q ss_pred -hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 -RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 -~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
......+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 128 ~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--ivH~dlkp~Nill~~ 173 (304)
T cd05096 128 PAHCLPAISYSSLLHVALQIASGMKYLSSLN--FVHRDLATRNCLVGE 173 (304)
T ss_pred cccccccccHHHHHHHHHHHHHHHHHHHHCC--ccccCcchhheEEcC
Confidence 111234567788999999999999999999 999999999999975
No 33
>KOG0586|consensus
Probab=99.88 E-value=1.4e-22 Score=137.87 Aligned_cols=106 Identities=34% Similarity=0.517 Sum_probs=96.1
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|++.+.. +....+++.+|++++..++||||++++.+.. ....+|+||||+.+|.+.+++..++...+..+
T Consensus 84 VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~-t~~~lylV~eya~~ge~~~yl~~~gr~~e~~a----- 157 (596)
T KOG0586|consen 84 VAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE-TEATLYLVMEYASGGELFDYLVKHGRMKEKEA----- 157 (596)
T ss_pred EEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee-ecceeEEEEEeccCchhHHHHHhcccchhhhh-----
Confidence 7999998873 4556688999999999999999999999998 78889999999999999999999888777666
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..++.|++.+++|+|+++ |+|||||++|+||+.
T Consensus 158 -------r~~F~q~vsaveYcH~k~--ivHrdLk~eNilL~~ 190 (596)
T KOG0586|consen 158 -------RAKFRQIVSAVEYCHSKN--IVHRDLKAENILLDE 190 (596)
T ss_pred -------hhhhHHHHHHHHHHhhcc--eeccccchhhccccc
Confidence 889999999999999999 999999999999974
No 34
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.88 E-value=1.5e-22 Score=133.98 Aligned_cols=106 Identities=25% Similarity=0.395 Sum_probs=88.9
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|.+... ......+.+.+|+.+++.++||||+.+++++. +.+..+++|||+.+|+|.+++.....+
T Consensus 59 vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-~~~~~~lv~Ey~~~g~L~~~i~~~~~~--------- 128 (340)
T PTZ00426 59 VAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFK-DESYLYLVLEFVIGGEFFTFLRRNKRF--------- 128 (340)
T ss_pred EEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcCCC---------
Confidence 477777543 12334567889999999999999999999998 778899999999999999998765443
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..+..++.|++.|+.|||+.+ ++||||||+|||++.
T Consensus 129 ---~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~ 166 (340)
T PTZ00426 129 ---PNDVGCFYAAQIVLIFEYLQSLN--IVYRDLKPENLLLDK 166 (340)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECC
Confidence 34455899999999999999999 999999999999974
No 35
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.88 E-value=1.6e-22 Score=133.17 Aligned_cols=106 Identities=26% Similarity=0.337 Sum_probs=89.1
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|+++... .....+.+.+|+.+++.++||||+++++.+. +.+..+++|||+.+|+|.+.+...+.+
T Consensus 46 ~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~--------- 115 (329)
T PTZ00263 46 YAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQ-DENRVYFLLEFVVGGELFTHLRKAGRF--------- 115 (329)
T ss_pred EEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-cCCEEEEEEcCCCCChHHHHHHHcCCC---------
Confidence 5788887541 2234567889999999999999999999998 778899999999999999988765443
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
++..+..++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 116 ---~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~ 153 (329)
T PTZ00263 116 ---PNDVAKFYHAELVLAFEYLHSKD--IIYRDLKPENLLLDN 153 (329)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEECC
Confidence 34444889999999999999999 999999999999975
No 36
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.88 E-value=1.6e-22 Score=135.50 Aligned_cols=106 Identities=26% Similarity=0.348 Sum_probs=89.3
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|++.... .....+.+.+|+.+++.++|+||+.+++.+. +.+..+++|||+++|+|.+++...+.+
T Consensus 29 ~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~~--------- 98 (381)
T cd05626 29 YAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQ-DKDNLYFVMDYIPGGDMMSLLIRMEVF--------- 98 (381)
T ss_pred EEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEe-cCCEEEEEEecCCCCcHHHHHHhcCCC---------
Confidence 5888887542 2334567889999999999999999999998 778899999999999999998764433
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
++..+..++.|++.|+.|||+.+ ++||||||+|||++.
T Consensus 99 ---~e~~~~~~~~qi~~aL~~LH~~g--ivHrDlKp~Nili~~ 136 (381)
T cd05626 99 ---PEVLARFYIAELTLAIESVHKMG--FIHRDIKPDNILIDL 136 (381)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHhCC--eeecCCcHHHEEECC
Confidence 34445889999999999999999 999999999999974
No 37
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.88 E-value=1.7e-22 Score=132.71 Aligned_cols=106 Identities=25% Similarity=0.397 Sum_probs=88.3
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|.+.... .......+.+|+.+++.++||||+.+++++. ..+..+++|||+.+|+|...+...+.
T Consensus 23 vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~-~~~~~~lv~E~~~~~~L~~~l~~~~~---------- 91 (323)
T cd05595 23 YAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERV---------- 91 (323)
T ss_pred EEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEe-cCCEEEEEEeCCCCCcHHHHHHHcCC----------
Confidence 5788887542 2234456778999999999999999999998 67789999999999999888765433
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++||||||+|||++.
T Consensus 92 --~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~ 130 (323)
T cd05595 92 --FTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDK 130 (323)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEEcC
Confidence 344555899999999999999999 999999999999975
No 38
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.88 E-value=1.4e-22 Score=134.94 Aligned_cols=106 Identities=23% Similarity=0.311 Sum_probs=88.9
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|++.+.. .....+.+.+|+.++..++|++|+.+++.+. +...++++|||+++|+|.+++...+.+
T Consensus 29 ~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~l--------- 98 (363)
T cd05628 29 YAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQ-DKLNLYLIMEFLPGGDMMTLLMKKDTL--------- 98 (363)
T ss_pred EEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEe-cCCeEEEEEcCCCCCcHHHHHHhcCCC---------
Confidence 5888887541 2234466788999999999999999999998 778899999999999999998765443
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..+..++.|++.|+.|||+.+ ++||||||+|||++.
T Consensus 99 ---~~~~~~~~~~qi~~aL~~lH~~g--ivHrDlKp~NILi~~ 136 (363)
T cd05628 99 ---TEEETQFYIAETVLAIDSIHQLG--FIHRDIKPDNLLLDS 136 (363)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECC
Confidence 44455899999999999999999 999999999999974
No 39
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.88 E-value=1.2e-22 Score=135.11 Aligned_cols=106 Identities=27% Similarity=0.394 Sum_probs=89.2
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||||++.... .......+.+|+.+++.++|+||+.+++.+. +....+++|||+.+|+|.+++...+.
T Consensus 29 vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~---------- 97 (364)
T cd05599 29 YAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQ-DENYLYLIMEYLPGGDMMTLLMKKDT---------- 97 (364)
T ss_pred EEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE-cCCeEEEEECCCCCcHHHHHHHHcCC----------
Confidence 5888887541 2234456778999999999999999999998 77889999999999999999876443
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++||||||+|||++.
T Consensus 98 --l~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~ 136 (364)
T cd05599 98 --FTEEETRFYIAETILAIDSIHKLG--YIHRDIKPDNLLLDA 136 (364)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECC
Confidence 344555899999999999999999 999999999999974
No 40
>KOG0605|consensus
Probab=99.88 E-value=1.4e-22 Score=136.17 Aligned_cols=107 Identities=29% Similarity=0.403 Sum_probs=95.7
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|++++.. .....+....|-.+|...+++.||++|.+|+ +...+||+|||++||++..+|...+.+.+..+
T Consensus 169 yAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQ-D~~~LYLiMEylPGGD~mTLL~~~~~L~e~~a---- 243 (550)
T KOG0605|consen 169 YAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQ-DKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWA---- 243 (550)
T ss_pred EeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEec-CCCeeEEEEEecCCccHHHHHHhcCcCchHHH----
Confidence 5899999873 4456788888999999999999999999999 89999999999999999999988766666555
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
..|+.+.+.|+.-+|+.| ++||||||+|+|||.+
T Consensus 244 --------rfYiaE~vlAI~~iH~~g--yIHRDIKPdNlLiD~~ 277 (550)
T KOG0605|consen 244 --------RFYIAETVLAIESIHQLG--YIHRDIKPDNLLIDAK 277 (550)
T ss_pred --------HHHHHHHHHHHHHHHHcC--cccccCChhheeecCC
Confidence 999999999999999999 9999999999999853
No 41
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.88 E-value=1.9e-22 Score=134.81 Aligned_cols=106 Identities=25% Similarity=0.323 Sum_probs=88.7
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|++.... .....+.+.+|+.+++.++|+||+.+++.+. +.+.++++|||+++|+|.+++...+.
T Consensus 29 ~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~-~~~~~~lv~E~~~~g~L~~~i~~~~~---------- 97 (376)
T cd05598 29 YAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQ-DKDNLYFVMDYIPGGDMMSLLIRLGI---------- 97 (376)
T ss_pred EEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEE-cCCEEEEEEeCCCCCcHHHHHHhcCC----------
Confidence 5788876531 2224566789999999999999999999998 77889999999999999999876433
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 98 --~~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nill~~ 136 (376)
T cd05598 98 --FEEDLARFYIAELTCAIESVHKMG--FIHRDIKPDNILIDR 136 (376)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHEEECC
Confidence 334455889999999999999999 999999999999974
No 42
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.88 E-value=2.6e-22 Score=132.18 Aligned_cols=106 Identities=27% Similarity=0.403 Sum_probs=89.0
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|++.... .......+.+|+.+++.++||||+.+++.+. ..+..++||||+.+|+|...+...+.
T Consensus 23 ~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~Ey~~~g~L~~~l~~~~~---------- 91 (328)
T cd05593 23 YAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQ-TKDRLCFVMEYVNGGELFFHLSRERV---------- 91 (328)
T ss_pred EEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE-cCCEEEEEEeCCCCCCHHHHHHhcCC----------
Confidence 5888887542 2334567788999999999999999999998 77889999999999999888765433
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++||||||+|||++.
T Consensus 92 --l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~NIll~~ 130 (328)
T cd05593 92 --FSEDRTRFYGAEIVSALDYLHSGK--IVYRDLKLENLMLDK 130 (328)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeEECC
Confidence 344555899999999999999999 999999999999975
No 43
>KOG4250|consensus
Probab=99.88 E-value=1.1e-22 Score=140.36 Aligned_cols=109 Identities=30% Similarity=0.450 Sum_probs=93.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
||||.+++......++...+|++++++++|+|||.++++-.+. .+...++||||+||+|...+....+
T Consensus 41 vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN------- 113 (732)
T KOG4250|consen 41 VAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPEN------- 113 (732)
T ss_pred hhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCccc-------
Confidence 6899999876667789999999999999999999999987522 2356789999999999999986432
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
...+++..++.++..++.|+.|||+++ |+||||||.||++-
T Consensus 114 --~~GLpE~e~l~lL~d~~~al~~LrEn~--IvHRDlKP~NIvl~ 154 (732)
T KOG4250|consen 114 --AYGLPESEFLDLLSDLVSALRHLRENG--IVHRDLKPGNIVLQ 154 (732)
T ss_pred --ccCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCcEEEe
Confidence 356777788999999999999999999 99999999999974
No 44
>KOG0599|consensus
Probab=99.88 E-value=6.4e-23 Score=129.37 Aligned_cols=107 Identities=25% Similarity=0.417 Sum_probs=91.4
Q ss_pred CeeeeccCCC----CCc---chHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHH
Q psy4991 1 MCAKLLTTNL----NLP---FPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER 72 (122)
Q Consensus 1 vavK~~~~~~----~~~---~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 72 (122)
+|+|++.-.. ++. ..++..+|+.+|+++ .||+|+.+.+.|+ +...+++|+|.|+.|.|.+++.+...+++.
T Consensus 45 ~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye-s~sF~FlVFdl~prGELFDyLts~VtlSEK 123 (411)
T KOG0599|consen 45 FAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE-SDAFVFLVFDLMPRGELFDYLTSKVTLSEK 123 (411)
T ss_pred eeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc-CcchhhhhhhhcccchHHHHhhhheeecHH
Confidence 4677776432 111 346677899999998 8999999999998 778889999999999999999987777776
Q ss_pred hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
.. ..+++|+..|+.|||..+ |+||||||+|||++++
T Consensus 124 ~t------------R~iMrqlfegVeylHa~~--IVHRDLKpENILlddn 159 (411)
T KOG0599|consen 124 ET------------RRIMRQLFEGVEYLHARN--IVHRDLKPENILLDDN 159 (411)
T ss_pred HH------------HHHHHHHHHHHHHHHHhh--hhhcccChhheeeccc
Confidence 66 899999999999999999 9999999999999864
No 45
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.88 E-value=2.1e-22 Score=131.66 Aligned_cols=106 Identities=24% Similarity=0.324 Sum_probs=88.8
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|+++.. ........+.+|+.++..++||||+.+++.+. ..+..++++||+.+|+|..++...+.+
T Consensus 21 ~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~--------- 90 (312)
T cd05585 21 YALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ-SPEKLYLVLAFINGGELFHHLQREGRF--------- 90 (312)
T ss_pred EEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe-cCCeEEEEEcCCCCCcHHHHHHhcCCC---------
Confidence 578888653 12334567788999999999999999999998 778899999999999999988764443
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 91 ---~~~~~~~~~~qi~~~l~~lH~~~--i~HrDlkp~Nili~~ 128 (312)
T cd05585 91 ---DLSRARFYTAELLCALENLHKFN--VIYRDLKPENILLDY 128 (312)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHeEECC
Confidence 34445889999999999999999 999999999999974
No 46
>KOG1989|consensus
Probab=99.88 E-value=1.8e-22 Score=141.41 Aligned_cols=110 Identities=25% Similarity=0.325 Sum_probs=91.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCC-CCCccceeee-ee---eC--CCeEEEEEeccCCCCHHHHHHhccchhHHh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALD-HPRVVKLYDV-FE---ID--ANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~-~~---~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 73 (122)
+|+|.+-.. ++...+...+|+++|+.++ |+|||.+++. .. .+ .-.++++||||.||.|-+++.....
T Consensus 65 ~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq----- 138 (738)
T KOG1989|consen 65 YALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQ----- 138 (738)
T ss_pred eeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHh-----
Confidence 578887766 5556788899999999995 9999999994 32 11 2368899999999999999986422
Q ss_pred hhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+.+++.|++++|+|+.+||...+||+|||||.|||||+.
T Consensus 139 -----~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~ 181 (738)
T KOG1989|consen 139 -----TRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSA 181 (738)
T ss_pred -----ccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcC
Confidence 3467777899999999999999999999999999999999975
No 47
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.88 E-value=2.2e-22 Score=134.74 Aligned_cols=106 Identities=25% Similarity=0.317 Sum_probs=88.6
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|++.... .....+.+.+|+.+++.++|+||+.+++.+. +.+..++||||+++|+|.+++...+.
T Consensus 29 ~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~---------- 97 (382)
T cd05625 29 YAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQ-DKDNLYFVMDYIPGGDMMSLLIRMGI---------- 97 (382)
T ss_pred EEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEE-eCCEEEEEEeCCCCCcHHHHHHhcCC----------
Confidence 5788876541 2234567788999999999999999999998 77889999999999999998875433
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++||||||+|||++.
T Consensus 98 --~~e~~~~~~~~qi~~al~~lH~~~--ivHrDlKp~NILl~~ 136 (382)
T cd05625 98 --FPEDLARFYIAELTCAVESVHKMG--FIHRDIKPDNILIDR 136 (382)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECC
Confidence 344455889999999999999999 999999999999975
No 48
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.88 E-value=3.1e-22 Score=131.18 Aligned_cols=106 Identities=23% Similarity=0.302 Sum_probs=87.8
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|++.... .......+.+|++++++++|+||+++++.+. +.+..++++||+.+|+|.+++.....
T Consensus 27 ~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~----------- 94 (318)
T cd05582 27 YAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQ-TEGKLYLILDFLRGGDLFTRLSKEVM----------- 94 (318)
T ss_pred EEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEE-cCCEEEEEEcCCCCCcHHHHHHHcCC-----------
Confidence 4778776542 2223456778999999999999999999998 67889999999999999988865433
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 95 -l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~ 133 (318)
T cd05582 95 -FTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDE 133 (318)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHeEECC
Confidence 345555999999999999999999 999999999999975
No 49
>KOG1094|consensus
Probab=99.88 E-value=5.3e-23 Score=140.09 Aligned_cols=108 Identities=27% Similarity=0.440 Sum_probs=93.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||||.++.......+.+|.+|+.+|.+++||||+.+.|+|. ..+.+|+++|||++|+|.+|+..+........
T Consensus 565 VAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~-~DePicmI~EYmEnGDLnqFl~aheapt~~t~------ 637 (807)
T KOG1094|consen 565 VAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCV-QDDPLCMITEYMENGDLNQFLSAHELPTAETA------ 637 (807)
T ss_pred EEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeee-cCCchHHHHHHHhcCcHHHHHHhccCcccccc------
Confidence 69999998865556789999999999999999999999999 77889999999999999999988644221111
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
...+++.||+.||+||.+.+ ++|||+.+.|+|++.
T Consensus 638 ----~~vsi~tqiasgmaYLes~n--fVHrd~a~rNcLv~~ 672 (807)
T KOG1094|consen 638 ----PGVSICTQIASGMAYLESLN--FVHRDLATRNCLVDG 672 (807)
T ss_pred ----hhHHHHHHHHHHHHHHHhhc--hhhccccccceeecC
Confidence 22679999999999999999 999999999999974
No 50
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.88 E-value=7.8e-22 Score=129.67 Aligned_cols=106 Identities=27% Similarity=0.402 Sum_probs=87.6
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|++.... .......+.+|+.+++.++|+||+.+++.+. ..+..++||||+.+|+|...+.....
T Consensus 23 ~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~-~~~~~~lv~E~~~~~~L~~~l~~~~~---------- 91 (325)
T cd05594 23 YAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRERV---------- 91 (325)
T ss_pred EEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEE-cCCEEEEEEeCCCCCcHHHHHHhcCC----------
Confidence 5788887542 2234466778999999999999999999998 77889999999999999888765433
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+ .+ ++||||||+||+++.
T Consensus 92 --l~~~~~~~~~~qi~~aL~~lH~~~~--ivHrDikp~NIll~~ 131 (325)
T cd05594 92 --FSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDK 131 (325)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHhcCC--EEecCCCCCeEEECC
Confidence 4445558999999999999997 68 999999999999975
No 51
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.88 E-value=5.6e-22 Score=132.65 Aligned_cols=118 Identities=20% Similarity=0.256 Sum_probs=93.0
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh---------
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA--------- 70 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------- 70 (122)
||+|.++........+.+.+|+.+++.+ +|+||+++++++. .....+++|||+.+|+|.+++.......
T Consensus 71 vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~-~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~ 149 (374)
T cd05106 71 VAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACT-HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPE 149 (374)
T ss_pred eEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEec-CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccc
Confidence 5788887654344456788999999999 8999999999998 6778899999999999999986532100
Q ss_pred -------------------------------------------------HHhhhhcCCCCChHHHHHHHHHHHHHHHHHH
Q psy4991 71 -------------------------------------------------EREARCLSQPYLSTSARSIVMQVVSALKYLN 101 (122)
Q Consensus 71 -------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh 101 (122)
.........++.+..++.++.|++.|+.|||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH 229 (374)
T cd05106 150 ISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA 229 (374)
T ss_pred cccccccccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 0000011234667788999999999999999
Q ss_pred cCCCCeeeeCCCCCCccccc
Q psy4991 102 EIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 102 ~~~~~i~h~dlk~~nill~~ 121 (122)
+.+ ++||||||+||+++.
T Consensus 230 ~~g--iiHrDLkp~Nil~~~ 247 (374)
T cd05106 230 SKN--CIHRDVAARNVLLTD 247 (374)
T ss_pred HCC--EEeccCchheEEEeC
Confidence 999 999999999999974
No 52
>KOG0585|consensus
Probab=99.88 E-value=1.5e-22 Score=134.93 Aligned_cols=108 Identities=31% Similarity=0.468 Sum_probs=85.3
Q ss_pred CeeeeccCCC--------CCc-----chHHHHHHHHHHhhCCCCCccceeeeee-eCCCeEEEEEeccCCCCHHHHHHhc
Q psy4991 1 MCAKLLTTNL--------NLP-----FPRHALREYNIHKALDHPRVVKLYDVFE-IDANSFCTVLEYCDGHDLDFYLKQH 66 (122)
Q Consensus 1 vavK~~~~~~--------~~~-----~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~ 66 (122)
||||++.+.. .+. ..++..+|+.+|+++.|+|||+++.+.. ...+.+|||+|||..|.+...-..
T Consensus 125 ~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d- 203 (576)
T KOG0585|consen 125 YAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPD- 203 (576)
T ss_pred EEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCC-
Confidence 6899998641 011 2357889999999999999999999996 233579999999998777432211
Q ss_pred cchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 67 KTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
...+.+.+.+.++++++.|++|||.++ |+||||||+|+|++++
T Consensus 204 -----------~~els~~~Ar~ylrDvv~GLEYLH~Qg--iiHRDIKPsNLLl~~~ 246 (576)
T KOG0585|consen 204 -----------KPELSEQQARKYLRDVVLGLEYLHYQG--IIHRDIKPSNLLLSSD 246 (576)
T ss_pred -----------cccccHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEEcCC
Confidence 122566677999999999999999999 9999999999999863
No 53
>KOG0589|consensus
Probab=99.88 E-value=4e-22 Score=132.89 Aligned_cols=110 Identities=31% Similarity=0.504 Sum_probs=93.2
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+++|.+.-. .+...++....|+.++++++||||+.+.+.|..++..++|+|+||+||++.+.++..+. .
T Consensus 32 ~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~----------~ 101 (426)
T KOG0589|consen 32 YVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKG----------V 101 (426)
T ss_pred EEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhh----------c
Confidence 466776644 34445678889999999999999999999998566669999999999999999987542 3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
.+++..++.|+.|++.|+.|||+++ |+|||||++||+++++
T Consensus 102 ~f~E~~i~~~~~Q~~~av~ylH~~~--iLHRDlK~~Nifltk~ 142 (426)
T KOG0589|consen 102 LFPEERILKWFVQILLAVNYLHENR--VLHRDLKCANIFLTKD 142 (426)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhhh--hhcccchhhhhhcccc
Confidence 4566777999999999999999988 9999999999999863
No 54
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.88 E-value=2e-22 Score=130.62 Aligned_cols=106 Identities=24% Similarity=0.369 Sum_probs=88.4
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|.+.... .....+.+.+|+.+++.++||||+++++.+. +....+++|||+.+|+|.+++...+.+
T Consensus 29 ~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~--------- 98 (291)
T cd05612 29 YALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEH-DQRFLYMLMEYVPGGELFSYLRNSGRF--------- 98 (291)
T ss_pred EEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhc-cCCeEEEEEeCCCCCCHHHHHHHcCCC---------
Confidence 5788876431 2234566789999999999999999999988 778899999999999999998765443
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.....++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 99 ---~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~NIli~~ 136 (291)
T cd05612 99 ---SNSTGLFYASEIVCALEYLHSKE--IVYRDLKPENILLDK 136 (291)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECC
Confidence 34445889999999999999999 999999999999975
No 55
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.88 E-value=9.5e-22 Score=129.30 Aligned_cols=108 Identities=16% Similarity=0.222 Sum_probs=89.0
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.+.... .....+.+.+|+.+++.++||||+++++.+. ..+..++++||+++|+|.+++..+.. .
T Consensus 28 vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~----------~ 96 (327)
T cd08227 28 VTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFI-ADNELWVVTSFMAYGSAKDLICTHFM----------D 96 (327)
T ss_pred EEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-ECCEEEEEEeccCCCcHHHHHHhhcc----------C
Confidence 5788887553 2234456778999999999999999999998 66788999999999999999865321 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 97 ~l~~~~~~~i~~qi~~~L~~LH~~~--iiH~dlkp~Nil~~~ 136 (327)
T cd08227 97 GMSELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISV 136 (327)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCChhhEEEec
Confidence 3455666899999999999999999 999999999999864
No 56
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.87 E-value=1e-21 Score=131.39 Aligned_cols=118 Identities=19% Similarity=0.239 Sum_probs=93.1
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh---------
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA--------- 70 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------- 70 (122)
||||+++........+.+.+|+.+++.+ +||||+++++++. .....+++|||+++|+|.+++.......
T Consensus 68 vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~ 146 (375)
T cd05104 68 VAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACT-VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHA 146 (375)
T ss_pred EEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeec-cCCcceeeehhccCCcHHHHHHhcccccccccccchh
Confidence 5889887654444557788999999999 8999999999998 6778899999999999999997532100
Q ss_pred ------------------------------------------------------HHhhhhcCCCCChHHHHHHHHHHHHH
Q psy4991 71 ------------------------------------------------------EREARCLSQPYLSTSARSIVMQVVSA 96 (122)
Q Consensus 71 ------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~i~~~ 96 (122)
..........+.+..++.++.|++.|
T Consensus 147 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~ 226 (375)
T cd05104 147 EAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKG 226 (375)
T ss_pred hhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 00000011245677889999999999
Q ss_pred HHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 97 LKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 97 l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.|||+.+ ++|+||||+||+++.
T Consensus 227 l~~lH~~~--ivH~Dlkp~Nill~~ 249 (375)
T cd05104 227 MSFLASKN--CIHRDLAARNILLTH 249 (375)
T ss_pred HHHHHHCC--eeccCCchhhEEEEC
Confidence 99999999 999999999999974
No 57
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.87 E-value=7.6e-22 Score=126.99 Aligned_cols=106 Identities=17% Similarity=0.193 Sum_probs=86.4
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+.... ....+.+.+|+.+++.++|+||+++++++. +....++||||+++|+|..++.... ..
T Consensus 47 v~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~~~~~~~-~~~~~~lv~ey~~~g~L~~~l~~~~-----------~~ 113 (274)
T cd05076 47 VVLKVLDPSH-RDIALAFFETASLMSQVSHIHLAFVHGVCV-RGSENIMVEEFVEHGPLDVCLRKEK-----------GR 113 (274)
T ss_pred EEEEecChHH-HHHHHHHHHHHHHHhcCCCCCeeeEEEEEE-eCCceEEEEecCCCCcHHHHHHhcC-----------CC
Confidence 4677766442 223467788999999999999999999998 6677889999999999988886422 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+++..+..++.|++.|+.|||+.+ ++|+||||+||++++
T Consensus 114 ~~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~Nill~~ 152 (274)
T cd05076 114 VPVAWKITVAQQLASALSYLEDKN--LVHGNVCAKNILLAR 152 (274)
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCC--ccCCCCCcccEEEec
Confidence 445566899999999999999999 999999999999863
No 58
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.87 E-value=1.5e-21 Score=131.59 Aligned_cols=118 Identities=20% Similarity=0.256 Sum_probs=93.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh---------
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA--------- 70 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------- 70 (122)
||||+++........+.+.+|+.+++.+. ||||+++++++. .....+++|||+++|+|.+++.......
T Consensus 70 vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~-~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~ 148 (400)
T cd05105 70 VAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT-KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPK 148 (400)
T ss_pred EEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc-cCCceEEEEEecCCCcHHHHHHHhhhhhhcccccccc
Confidence 58898876644445678999999999995 999999999998 6778999999999999999987532100
Q ss_pred ---------------------------------------------------------------------------HHhhh
Q psy4991 71 ---------------------------------------------------------------------------EREAR 75 (122)
Q Consensus 71 ---------------------------------------------------------------------------~~~~~ 75 (122)
.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 228 (400)
T cd05105 149 KDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSD 228 (400)
T ss_pred ccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHh
Confidence 00000
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.....+.+..+..++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 229 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dikp~Nill~~ 272 (400)
T cd05105 229 DGSEGLTTLDLLSFTYQVARGMEFLASKN--CVHRDLAARNVLLAQ 272 (400)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChHhEEEeC
Confidence 11124667778899999999999999999 999999999999975
No 59
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.87 E-value=5.3e-22 Score=130.79 Aligned_cols=106 Identities=28% Similarity=0.361 Sum_probs=89.3
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|+++... .....+.+.+|+.++..++|+||+++++.+. ..+..+++|||+++++|.+++...+.
T Consensus 29 vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~---------- 97 (333)
T cd05600 29 VALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ-DDEYLYLAMEYVPGGDFRTLLNNLGV---------- 97 (333)
T ss_pred EEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE-cCCEEEEEEeCCCCCCHHHHHHHcCC----------
Confidence 5788887542 2234567889999999999999999999998 77889999999999999999875443
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 98 --l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~ 136 (333)
T cd05600 98 --LSEDHARFYMAEMFEAVDALHELG--YIHRDLKPENFLIDA 136 (333)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECC
Confidence 344455889999999999999999 999999999999975
No 60
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.87 E-value=5.6e-22 Score=130.28 Aligned_cols=106 Identities=27% Similarity=0.360 Sum_probs=87.4
Q ss_pred CeeeeccCCC---CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL---NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
||+|+++... .......+.+|+.+++.++||||+.+++.+. ..+..+++|||+.+++|.+.+...+..
T Consensus 27 ~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~-------- 97 (323)
T cd05584 27 FAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQ-TGGKLYLILEYLSGGELFMHLEREGIF-------- 97 (323)
T ss_pred EEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEe-cCCeEEEEEeCCCCchHHHHHHHcCCC--------
Confidence 5788877531 2233456778999999999999999999998 677899999999999999988764433
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..+..++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 98 ----~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~ 135 (323)
T cd05584 98 ----MEDTACFYLSEISLALEHLHQQG--IIYRDLKPENILLDA 135 (323)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECC
Confidence 33444788999999999999999 999999999999974
No 61
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.87 E-value=1.6e-21 Score=126.46 Aligned_cols=118 Identities=21% Similarity=0.348 Sum_probs=92.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|..+........+.+.+|++++++++|+|++.+++.+. .....+++|||+.+++|.+++.................
T Consensus 47 vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 125 (295)
T cd05097 47 VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCV-SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPS 125 (295)
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEc-CCCccEEEEecCCCCcHHHHHHhccccccccccccCCc
Confidence 47888776544445567889999999999999999999998 66788999999999999999865321111111111223
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+|+||+||+++.
T Consensus 126 ~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~Nill~~ 164 (295)
T cd05097 126 VSIANLLYMAVQIASGMKYLASLN--FVHRDLATRNCLVGN 164 (295)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcC--eeccccChhhEEEcC
Confidence 567778999999999999999999 999999999999974
No 62
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.87 E-value=1.3e-21 Score=125.24 Aligned_cols=110 Identities=23% Similarity=0.293 Sum_probs=87.3
Q ss_pred eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCC
Q psy4991 2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPY 81 (122)
Q Consensus 2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 81 (122)
|+|.+...........+.+|+..++.++|+||+++++.+. .....+++|||+.+|+|.+++....... ....
T Consensus 26 ~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~-------~~~~ 97 (269)
T cd05042 26 VVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCI-ESIPYLLVLEFCPLGDLKNYLRSNRGMV-------AQMA 97 (269)
T ss_pred EEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCceEEEEEeCCCCcHHHHHHhccccc-------cccc
Confidence 5565554433334456789999999999999999999998 6778899999999999999997643211 0122
Q ss_pred ChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 82 LSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 82 ~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.....++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 98 ~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~ 135 (269)
T cd05042 98 QKDVLQRMACEVASGLLWLHQAD--FIHSDLALRNCQLTA 135 (269)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcC--EecccccHhheEecC
Confidence 34556889999999999999999 999999999999975
No 63
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.87 E-value=1.1e-21 Score=129.28 Aligned_cols=106 Identities=24% Similarity=0.332 Sum_probs=88.2
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
||+|+++... .......+.+|..++..+ +||||+.+++++. +.+..+++|||+++|+|..++...+.
T Consensus 23 ~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~~~~~~~--------- 92 (329)
T cd05588 23 YAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQ-TESRLFFVIEFVSGGDLMFHMQRQRK--------- 92 (329)
T ss_pred EEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEE-cCCEEEEEEeCCCCCCHHHHHHHcCC---------
Confidence 5888887642 223345677899999888 7999999999998 77889999999999999888765443
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+++..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 93 ---l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nili~~ 131 (329)
T cd05588 93 ---LPEEHARFYSAEISLALNFLHERG--IIYRDLKLDNVLLDA 131 (329)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECC
Confidence 444555899999999999999999 999999999999974
No 64
>KOG0196|consensus
Probab=99.87 E-value=1.4e-22 Score=141.43 Aligned_cols=108 Identities=23% Similarity=0.387 Sum_probs=98.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||||.++.+..++.+.+|+.|+.+|.+++||||+++.|+.+ ..+.++|+.|||++|+|..||+.+. .+
T Consensus 660 VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVT-ks~PvMIiTEyMENGsLDsFLR~~D-----------Gq 727 (996)
T KOG0196|consen 660 VAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVT-KSKPVMIITEYMENGSLDSFLRQND-----------GQ 727 (996)
T ss_pred EEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEe-cCceeEEEhhhhhCCcHHHHHhhcC-----------Cc
Confidence 79999999988889999999999999999999999999998 7788999999999999999999753 24
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
+..-++..++++|+.||.||-+.+ .+||||..+|||++.+
T Consensus 728 ftviQLVgMLrGIAsGMkYLsdm~--YVHRDLAARNILVNsn 767 (996)
T KOG0196|consen 728 FTVIQLVGMLRGIASGMKYLSDMN--YVHRDLAARNILVNSN 767 (996)
T ss_pred eEeehHHHHHHHHHHHhHHHhhcC--chhhhhhhhheeeccc
Confidence 566677899999999999999999 9999999999999753
No 65
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.87 E-value=8.1e-22 Score=131.18 Aligned_cols=106 Identities=24% Similarity=0.353 Sum_probs=88.9
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|++... ......+.+.+|+.++..++|++|+.+++.+. +.+..+++|||+++|+|.+++...+.+
T Consensus 29 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~l--------- 98 (360)
T cd05627 29 YAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQ-DKRNLYLIMEFLPGGDMMTLLMKKDTL--------- 98 (360)
T ss_pred EEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE-cCCEEEEEEeCCCCccHHHHHHhcCCC---------
Confidence 578888653 12334567788999999999999999999998 778899999999999999998764443
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 99 ---~~~~~~~~~~qi~~~L~~lH~~g--ivHrDLkp~NIli~~ 136 (360)
T cd05627 99 ---SEEATQFYIAETVLAIDAIHQLG--FIHRDIKPDNLLLDA 136 (360)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECC
Confidence 44455899999999999999999 999999999999974
No 66
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.87 E-value=2.5e-21 Score=126.03 Aligned_cols=106 Identities=25% Similarity=0.422 Sum_probs=87.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|++...........+.+|+.+++.++|+||+.+++++. +....++++||+. ++|.+++.... ..
T Consensus 33 ~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~-----------~~ 99 (303)
T cd07869 33 VALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIH-TKETLTLVFEYVH-TDLCQYMDKHP-----------GG 99 (303)
T ss_pred EEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEe-cCCeEEEEEECCC-cCHHHHHHhCC-----------CC
Confidence 58888876544444566789999999999999999999998 6778999999997 78877776432 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++|+||||+||++++
T Consensus 100 ~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~ 138 (303)
T cd07869 100 LHPENVKLFLFQLLRGLSYIHQRY--ILHRDLKPQNLLISD 138 (303)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECC
Confidence 455566899999999999999999 999999999999975
No 67
>KOG0032|consensus
Probab=99.87 E-value=1.5e-21 Score=130.24 Aligned_cols=105 Identities=32% Similarity=0.509 Sum_probs=91.1
Q ss_pred CeeeeccCCCC--CcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNLN--LPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~~--~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
+|+|++++... ....+...+|+.+|+.+. ||||+.++++|+ +....++|||++.||.|.+.+... .
T Consensus 63 ~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e-~~~~~~lvmEL~~GGeLfd~i~~~-~--------- 131 (382)
T KOG0032|consen 63 VACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFE-DPDSVYLVMELCEGGELFDRIVKK-H--------- 131 (382)
T ss_pred eEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEE-cCCeEEEEEEecCCchHHHHHHHc-c---------
Confidence 58999987732 234578999999999997 999999999999 778899999999999999988764 1
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+.....++.|++.++.|||+.| ++|||+||+|+|+..
T Consensus 132 ---~sE~da~~~~~~il~av~~lH~~g--vvHrDlKpEN~L~~~ 170 (382)
T KOG0032|consen 132 ---YSERDAAGIIRQILEAVKYLHSLG--VVHRDLKPENLLLAS 170 (382)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHhCC--ceeccCCHHHeeecc
Confidence 445555999999999999999999 999999999999864
No 68
>KOG1095|consensus
Probab=99.87 E-value=7.2e-22 Score=142.17 Aligned_cols=113 Identities=22% Similarity=0.281 Sum_probs=100.4
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.++...+.+...+|++|..+|+.++||||++++|++. +....++++|||++|+|..|+++.++-.. ....
T Consensus 725 vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l-~~~~~~i~leyM~gGDL~sflr~~r~~~~-----~~~~ 798 (1025)
T KOG1095|consen 725 VAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCL-DSGPPLILLEYMEGGDLLSFLRESRPAPF-----QPSN 798 (1025)
T ss_pred EEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeec-CCCCcEEEehhcccCcHHHHHHhcccccC-----CCCC
Confidence 68999999888888999999999999999999999999999 57778899999999999999998654222 1345
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.....+.++.+++.|+.||+++. ++||||..+|+||+.
T Consensus 799 L~~~dLl~~a~dvA~G~~YLe~~~--fvHRDLAaRNCLL~~ 837 (1025)
T KOG1095|consen 799 LSMRDLLAFALDVAKGMNYLESKH--FVHRDLAARNCLLDE 837 (1025)
T ss_pred CCHHHHHHHHHHHhhhhHHHHhCC--CcCcchhhhheeecc
Confidence 677788999999999999999999 999999999999985
No 69
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.87 E-value=2.2e-21 Score=125.61 Aligned_cols=106 Identities=27% Similarity=0.410 Sum_probs=87.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.++..........+.+|+.+++.++|+||+++++++. .....++++||+. ++|.+++...+. .
T Consensus 33 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~~-----------~ 99 (288)
T cd07871 33 VALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIH-TERCLTLVFEYLD-SDLKQYLDNCGN-----------L 99 (288)
T ss_pred EEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEc-CCCeEEEEEeCCC-cCHHHHHHhcCC-----------C
Confidence 57888875543444567789999999999999999999998 6678899999998 689888765322 2
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 100 ~~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~ 138 (288)
T cd07871 100 MSMHNVKIFMFQLLRGLSYCHKRK--ILHRDLKPQNLLINE 138 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECC
Confidence 345566899999999999999999 999999999999975
No 70
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.87 E-value=2.4e-21 Score=127.83 Aligned_cols=106 Identities=26% Similarity=0.430 Sum_probs=88.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+.........+.+.+|+++++.++|+||+.+++++. +.+..+++|||+.+++|.+++...+..
T Consensus 33 ~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~----------- 100 (333)
T cd06650 33 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKAGRI----------- 100 (333)
T ss_pred EEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEE-ECCEEEEEEecCCCCcHHHHHHHcCCC-----------
Confidence 46777665533445577889999999999999999999998 677899999999999999998764433
Q ss_pred CChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~ 121 (122)
.+..+..++.|++.|+.|||+. + ++|+||||+||++++
T Consensus 101 -~~~~~~~~~~~l~~~l~~lH~~~~--ivH~dlkp~Nili~~ 139 (333)
T cd06650 101 -PEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNS 139 (333)
T ss_pred -CHHHHHHHHHHHHHHHHHHHhcCC--EEecCCChhhEEEcC
Confidence 3445589999999999999974 6 999999999999975
No 71
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.87 E-value=2.4e-21 Score=127.62 Aligned_cols=106 Identities=25% Similarity=0.417 Sum_probs=88.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+.........+.+.+|+++++.++|+||+++++++. ..+..+++|||+++++|.+++.....
T Consensus 33 ~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~------------ 99 (331)
T cd06649 33 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKEAKR------------ 99 (331)
T ss_pred EEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-ECCEEEEEeecCCCCcHHHHHHHcCC------------
Confidence 46777765533445577899999999999999999999998 66788999999999999999876433
Q ss_pred CChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+. + ++|+||||+||+++.
T Consensus 100 ~~~~~~~~~~~~i~~~l~~lH~~~~--ivH~dlkp~Nil~~~ 139 (331)
T cd06649 100 IPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNS 139 (331)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCC--EEcCCCChhhEEEcC
Confidence 34455589999999999999985 6 999999999999975
No 72
>KOG0660|consensus
Probab=99.86 E-value=2.9e-22 Score=129.32 Aligned_cols=106 Identities=27% Similarity=0.447 Sum_probs=90.2
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeee----CCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEI----DANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
||+|.+... ......++..+|+.+|+.++|+||+.+.+.+.. .-+.+|+|+|+|+ .+|.+.++....+.....
T Consensus 50 VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMe-tDL~~iik~~~~L~d~H~- 127 (359)
T KOG0660|consen 50 VAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELME-TDLHQIIKSQQDLTDDHA- 127 (359)
T ss_pred eehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHh-hHHHHHHHcCccccHHHH-
Confidence 678877744 345578999999999999999999999999863 2346999999996 899999997655555555
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+++|++.|+.|+|+.+ ++||||||+|++++.
T Consensus 128 -----------q~f~YQiLrgLKyiHSAn--ViHRDLKPsNll~n~ 160 (359)
T KOG0660|consen 128 -----------QYFLYQILRGLKYIHSAN--VIHRDLKPSNLLLNA 160 (359)
T ss_pred -----------HHHHHHHHHhcchhhccc--ccccccchhheeecc
Confidence 899999999999999999 999999999999975
No 73
>KOG0597|consensus
Probab=99.86 E-value=6.8e-22 Score=134.50 Aligned_cols=105 Identities=30% Similarity=0.458 Sum_probs=92.9
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.+.+. ..++....+.+|+++++.++||||+.++++|+ +...+++|.||+. |+|..++..++.+++...
T Consensus 30 vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfE-t~~~~~vVte~a~-g~L~~il~~d~~lpEe~v----- 102 (808)
T KOG0597|consen 30 VAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFE-TSAHLWVVTEYAV-GDLFTILEQDGKLPEEQV----- 102 (808)
T ss_pred EEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhc-ccceEEEEehhhh-hhHHHHHHhccCCCHHHH-----
Confidence 689998876 34456677899999999999999999999999 7888999999998 599999998766555554
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..++.+++.|+.|||+.+ |+|||+||+|||+..
T Consensus 103 -------~~~a~~LVsaL~yLhs~r--ilhrd~kPqniLl~~ 135 (808)
T KOG0597|consen 103 -------RAIAYDLVSALYYLHSNR--ILHRDMKPQNILLEK 135 (808)
T ss_pred -------HHHHHHHHHHHHHHHhcC--cccccCCcceeeecC
Confidence 999999999999999999 999999999999864
No 74
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.86 E-value=1.8e-21 Score=130.03 Aligned_cols=105 Identities=27% Similarity=0.325 Sum_probs=87.1
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|++.+. ......+.+.+|+.+++.++||||+++++++. +....+++|||+++|+|.+++...
T Consensus 71 ~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~-~~~~~~lv~Ey~~gg~L~~~l~~~------------ 137 (370)
T cd05621 71 YAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ-DDKYLYMVMEYMPGGDLVNLMSNY------------ 137 (370)
T ss_pred EEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE-cCCEEEEEEcCCCCCcHHHHHHhc------------
Confidence 578887643 12233456778999999999999999999998 778899999999999999988642
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+++.++..++.|++.|+.|||+.+ ++||||||+|||+++
T Consensus 138 -~~~~~~~~~~~~qil~aL~~LH~~~--IvHrDLKp~NILl~~ 177 (370)
T cd05621 138 -DVPEKWAKFYTAEVVLALDAIHSMG--LIHRDVKPDNMLLDK 177 (370)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECC
Confidence 2344555889999999999999999 999999999999975
No 75
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.86 E-value=5.3e-21 Score=121.99 Aligned_cols=106 Identities=25% Similarity=0.403 Sum_probs=88.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|++.........+.+.+|+.++++++|+||+++++.+. ....++++||+++++|.+++.... ..
T Consensus 25 vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~-----------~~ 91 (257)
T cd05115 25 VAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE--AEALMLVMEMASGGPLNKFLSGKK-----------DE 91 (257)
T ss_pred EEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc--CCCeEEEEEeCCCCCHHHHHHhCC-----------CC
Confidence 57888776544445577889999999999999999999885 356789999999999998886422 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+++..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 92 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~ 130 (257)
T cd05115 92 ITVSNVVELMHQVSMGMKYLEGKN--FVHRDLAARNVLLVN 130 (257)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcC--eeecccchheEEEcC
Confidence 455667999999999999999999 999999999999864
No 76
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.86 E-value=3.5e-21 Score=132.35 Aligned_cols=109 Identities=27% Similarity=0.355 Sum_probs=86.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+... .......+.+|+.+++.++||||+++++.+. ..+..+++|||+.+|+|.+.+..... ...+
T Consensus 96 vv~K~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~--------~~~~ 165 (478)
T PTZ00267 96 VVAKFVMLN-DERQAAYARSELHCLAACDHFGIVKHFDDFK-SDDKLLLIMEYGSGGDLNKQIKQRLK--------EHLP 165 (478)
T ss_pred EEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-ECCEEEEEEECCCCCCHHHHHHHHHh--------ccCC
Confidence 355654333 2233456678999999999999999999998 67889999999999999988764211 1234
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|+|+.+ ++||||||+|||++.
T Consensus 166 l~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~~ 204 (478)
T PTZ00267 166 FQEYEVGLLFYQIVLALDEVHSRK--MMHRDLKSANIFLMP 204 (478)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--EEECCcCHHhEEECC
Confidence 556667899999999999999999 999999999999975
No 77
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.86 E-value=6e-21 Score=122.72 Aligned_cols=118 Identities=22% Similarity=0.296 Sum_probs=95.4
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHh--hhhcC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE--ARCLS 78 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~--~~~~~ 78 (122)
||+|.++........+.+.+|+++++.++|+|++.+++.+. .....++++||+++++|.+++...+...... .....
T Consensus 38 vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~ 116 (280)
T cd05049 38 VAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCT-EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPM 116 (280)
T ss_pred EEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEe-cCCCeEEEEecCCCCCHHHHHHhcCCchhhhccccccc
Confidence 57888776543334678899999999999999999999998 6678899999999999999998654321111 11122
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..+..++.|++.++.++|+.+ ++|+||||+||+++.
T Consensus 117 ~~l~~~~~~~~~~~i~~~l~~lH~~~--i~h~dlkp~nili~~ 157 (280)
T cd05049 117 GELTLSQLLQIAVQIASGMVYLASQH--FVHRDLATRNCLVGY 157 (280)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhCC--eeccccccceEEEcC
Confidence 45677888999999999999999999 999999999999975
No 78
>KOG0033|consensus
Probab=99.86 E-value=5.9e-22 Score=123.31 Aligned_cols=105 Identities=27% Similarity=0.383 Sum_probs=87.5
Q ss_pred eeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 2 CAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 2 avK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
|+|++... .+...-+++.+|+++.+.++||||+++...+. +....|+|+|++.|++|..-+-.....++..+
T Consensus 40 a~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~-~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~a------ 112 (355)
T KOG0033|consen 40 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-EESFHYLVFDLVTGGELFEDIVAREFYSEADA------ 112 (355)
T ss_pred HHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhc-ccceeEEEEecccchHHHHHHHHHHHHHHHHH------
Confidence 55666654 23446788999999999999999999999998 77888999999999999665554444455545
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+++||++++.|+|..+ |+|||+||+|+++.+
T Consensus 113 ------SH~~rQiLeal~yCH~n~--IvHRDvkP~nllLAS 145 (355)
T KOG0033|consen 113 ------SHCIQQILEALAYCHSNG--IVHRDLKPENLLLAS 145 (355)
T ss_pred ------HHHHHHHHHHHHHHHhcC--ceeccCChhheeeee
Confidence 789999999999999999 999999999999864
No 79
>KOG0584|consensus
Probab=99.86 E-value=9e-22 Score=134.34 Aligned_cols=97 Identities=25% Similarity=0.406 Sum_probs=85.2
Q ss_pred CcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHH
Q psy4991 12 LPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIV 90 (122)
Q Consensus 12 ~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (122)
+...+++..|+++|+.++|+||+++|..|.+. ...+-+++|.+..|+|..|+++.+.....-. ..|+
T Consensus 82 ~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kai------------k~W~ 149 (632)
T KOG0584|consen 82 PEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAI------------KSWC 149 (632)
T ss_pred hHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHH------------HHHH
Confidence 44568999999999999999999999999722 2357789999999999999998776555444 8999
Q ss_pred HHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 91 MQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 91 ~~i~~~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
+||+.||.|||+..|||+|||||.+||+++
T Consensus 150 RQILkGL~yLHs~~PPIIHRDLKCDNIFin 179 (632)
T KOG0584|consen 150 RQILKGLVYLHSQDPPIIHRDLKCDNIFVN 179 (632)
T ss_pred HHHHHHhhhhhcCCCCccccccccceEEEc
Confidence 999999999999999999999999999986
No 80
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.86 E-value=1.5e-21 Score=129.26 Aligned_cols=106 Identities=29% Similarity=0.395 Sum_probs=89.5
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|+++... .....+.+.+|+.++..++|+||+.+++.+. +.+..+++|||+.+++|..++...+.
T Consensus 29 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~---------- 97 (350)
T cd05573 29 YAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQ-DEEHLYLVMEYMPGGDLMNLLIRKDV---------- 97 (350)
T ss_pred EEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhee-cCCeEEEEEcCCCCCCHHHHHHHcCC----------
Confidence 5888887542 2234567888999999999999999999998 77889999999999999999876433
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 98 --l~~~~~~~i~~qi~~aL~~LH~~g--iiH~Dlkp~NIll~~ 136 (350)
T cd05573 98 --FPEETARFYIAELVLALDSVHKLG--FIHRDIKPDNILIDA 136 (350)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECC
Confidence 344455899999999999999999 999999999999975
No 81
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.86 E-value=5.6e-21 Score=121.30 Aligned_cols=107 Identities=22% Similarity=0.310 Sum_probs=88.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.............+.+|++++++++|+||+++++++. .....++++||+.+++|.+++.... ..
T Consensus 23 ~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-----------~~ 90 (252)
T cd05084 23 VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT-QKQPIYIVMELVQGGDFLTFLRTEG-----------PR 90 (252)
T ss_pred EEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCCeEEEEeeccCCcHHHHHHhCC-----------CC
Confidence 46777665433445577899999999999999999999998 6678899999999999999886432 13
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 91 ~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~ 129 (252)
T cd05084 91 LKVKELIQMVENAAAGMEYLESKH--CIHRDLAARNCLVTE 129 (252)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEEcC
Confidence 445566899999999999999999 999999999999975
No 82
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.86 E-value=3.3e-21 Score=126.96 Aligned_cols=106 Identities=25% Similarity=0.347 Sum_probs=87.2
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
||+|++++.. .......+.+|+.++.++ +||||+.+++++. ..+..+++|||+.+|+|...+...+.
T Consensus 23 ~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~-~~~~~~lv~E~~~~~~L~~~~~~~~~--------- 92 (329)
T cd05618 23 YAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-TESRLFFVIEYVNGGDLMFHMQRQRK--------- 92 (329)
T ss_pred EEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEE-eCCEEEEEEeCCCCCCHHHHHHHcCC---------
Confidence 5788887652 223445677888888877 8999999999998 67889999999999999888765433
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+++..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 93 ---l~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dikp~Nili~~ 131 (329)
T cd05618 93 ---LPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDS 131 (329)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECC
Confidence 444555899999999999999999 999999999999975
No 83
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.86 E-value=2.8e-21 Score=126.86 Aligned_cols=106 Identities=25% Similarity=0.313 Sum_probs=87.6
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
||+|+++... .....+.+..|.+++... +||||+.+++++. ..+..+++|||+.+++|...+...+.
T Consensus 23 ~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~-~~~~~~lv~E~~~~~~L~~~l~~~~~--------- 92 (321)
T cd05591 23 YAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQ-TKDRLFFVMEYVNGGDLMFQIQRSRK--------- 92 (321)
T ss_pred EEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE-cCCeEEEEEeCCCCCcHHHHHHHcCC---------
Confidence 5888887642 233456677889888876 8999999999998 77889999999999999888876443
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 93 ---~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~Nill~~ 131 (321)
T cd05591 93 ---FDEPRSRFYAAEVTLALMFLHRHG--VIYRDLKLDNILLDA 131 (321)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECC
Confidence 334455889999999999999999 999999999999975
No 84
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.86 E-value=7e-21 Score=123.57 Aligned_cols=117 Identities=22% Similarity=0.377 Sum_probs=93.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+.........+++.+|+.+++.++|+||+.+++.+. ..+..++++||+.+++|..++......... .......
T Consensus 49 ~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~-~~~~~~~ 126 (296)
T cd05095 49 VAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCI-TSDPLCMITEYMENGDLNQFLSRHEPQEAA-EKADVVT 126 (296)
T ss_pred EEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-cCCccEEEEEeCCCCcHHHHHHhcCccccc-ccccccc
Confidence 46777775544445678899999999999999999999997 667789999999999999998764332111 1112234
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+||||+||++++
T Consensus 127 ~~~~~~~~~~~~i~~al~~lH~~~--i~H~dlkp~Nili~~ 165 (296)
T cd05095 127 ISYSTLIFMATQIASGMKYLSSLN--FVHRDLATRNCLVGK 165 (296)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC--eecccCChheEEEcC
Confidence 667788999999999999999999 999999999999964
No 85
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.86 E-value=2.4e-21 Score=127.22 Aligned_cols=106 Identities=25% Similarity=0.374 Sum_probs=87.7
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
||+|++.+.. .....+.+..|..++... +||||+.+++++. ..+.++++|||+.+|+|...+.....+
T Consensus 23 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~-~~~~~~iv~Ey~~~g~L~~~i~~~~~l-------- 93 (320)
T cd05590 23 YAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQ-TPDRLFFVMEFVNGGDLMFHIQKSRRF-------- 93 (320)
T ss_pred EEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEE-cCCEEEEEEcCCCCchHHHHHHHcCCC--------
Confidence 5888887541 233456677888888877 7999999999998 778899999999999999888764443
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..+..++.|++.|+.|||+.+ ++||||||+||++++
T Consensus 94 ----~~~~~~~~~~ql~~~L~~lH~~~--ivH~dlkp~NIli~~ 131 (320)
T cd05590 94 ----DEARARFYAAEITSALMFLHDKG--IIYRDLKLDNVLLDH 131 (320)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECC
Confidence 34455889999999999999999 999999999999975
No 86
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.86 E-value=3.5e-21 Score=128.69 Aligned_cols=105 Identities=26% Similarity=0.284 Sum_probs=86.8
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|.+.+. ......+.+.+|+.+++.++||||+.+++++. +.+..+++|||+++|+|..++...
T Consensus 71 ~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~-~~~~~~lv~Ey~~gg~L~~~l~~~------------ 137 (370)
T cd05596 71 YAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQ-DDKYLYMVMEYMPGGDLVNLMSNY------------ 137 (370)
T ss_pred EEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEe-cCCEEEEEEcCCCCCcHHHHHHhc------------
Confidence 578888653 12233455778999999999999999999988 778899999999999999988642
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+++..+..++.|++.|+.|||+.+ ++||||||+|||++.
T Consensus 138 -~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~ 177 (370)
T cd05596 138 -DIPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDK 177 (370)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEcC
Confidence 2344455888999999999999999 999999999999975
No 87
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.86 E-value=8.2e-21 Score=121.55 Aligned_cols=107 Identities=24% Similarity=0.393 Sum_probs=89.3
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.++........+.+.+|+.++++++||||+++++.+. ..+..++++||+++++|.+++.... ..
T Consensus 35 ~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-----------~~ 102 (267)
T cd05066 35 VAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-KSKPVMIVTEYMENGSLDAFLRKHD-----------GQ 102 (267)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-cCCccEEEEEcCCCCCHHHHHHhcC-----------CC
Confidence 46777765543445578899999999999999999999997 6678899999999999999887532 13
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+|+||+||+++.
T Consensus 103 ~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlkp~nili~~ 141 (267)
T cd05066 103 FTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILVNS 141 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--EeehhhchhcEEECC
Confidence 455566899999999999999999 999999999999864
No 88
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.86 E-value=4.6e-21 Score=123.06 Aligned_cols=115 Identities=23% Similarity=0.348 Sum_probs=90.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+.........+.+.+|++++++++|+|++.+++.+. +....++++||+++++|.+++......... .....
T Consensus 38 ~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~---~~~~~ 113 (275)
T cd05046 38 VLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCR-EAEPHYMILEYTDLGDLKQFLRATKSKDEK---LKPPP 113 (275)
T ss_pred EEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEEC-CCCcceEEEEecCCCcHHHHHHhccccccc---ccccC
Confidence 35666654432224567899999999999999999999887 667789999999999999998764311100 11224
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.++.|||+.+ ++|+||||+||+++.
T Consensus 114 l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dlkp~Nili~~ 152 (275)
T cd05046 114 LSTKQKVALCTQIALGMDHLSNAR--FVHRDLAARNCLVSS 152 (275)
T ss_pred CCHHHHHHHHHHHHHHHHHhhhcC--cccCcCccceEEEeC
Confidence 667778999999999999999999 999999999999974
No 89
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.86 E-value=3.6e-21 Score=126.14 Aligned_cols=106 Identities=22% Similarity=0.336 Sum_probs=85.8
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
||+|+++... .....+....|..++... +||||+.+++.+. .....+++|||+.+|+|...+...+.
T Consensus 23 vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~-~~~~~~lv~e~~~gg~L~~~~~~~~~--------- 92 (316)
T cd05592 23 FAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQ-TKEHLFFVMEYLNGGDLMFHIQSSGR--------- 92 (316)
T ss_pred EEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEE-cCCEEEEEEcCCCCCcHHHHHHHcCC---------
Confidence 5888887542 223445566777777655 8999999999998 77889999999999999988876443
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 93 ---~~~~~~~~~~~qi~~al~~LH~~~--ivH~dlkp~Nill~~ 131 (316)
T cd05592 93 ---FDEARARFYAAEIICGLQFLHKKG--IIYRDLKLDNVLLDK 131 (316)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHeEECC
Confidence 344455889999999999999999 999999999999975
No 90
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.86 E-value=1.1e-20 Score=120.89 Aligned_cols=107 Identities=22% Similarity=0.355 Sum_probs=90.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.++..........+.+|+.++++++|+||+++++.+. ..+..++++||+.+++|.+++.... ..
T Consensus 35 vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~iv~e~~~~~~L~~~~~~~~-----------~~ 102 (266)
T cd05033 35 VAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVT-KSRPVMIITEYMENGSLDKFLREND-----------GK 102 (266)
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEe-cCCceEEEEEcCCCCCHHHHHHhcc-----------CC
Confidence 57888776544445677889999999999999999999987 6677899999999999999887532 13
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 103 ~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~di~p~nili~~ 141 (266)
T cd05033 103 FTVGQLVGMLRGIASGMKYLSEMN--YVHRDLAARNILVNS 141 (266)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcC
Confidence 455666899999999999999999 999999999999975
No 91
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.86 E-value=2.9e-21 Score=123.38 Aligned_cols=108 Identities=32% Similarity=0.507 Sum_probs=89.0
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
|+||.++........+.+.+|++.+++++||||++++|++. ..+..++++||+.+|+|.+++... ....
T Consensus 31 V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~-~~~~~~lv~e~~~~g~L~~~L~~~----------~~~~ 99 (259)
T PF07714_consen 31 VAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCI-ENEPLFLVMEYCPGGSLDDYLKSK----------NKEP 99 (259)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEE-SSSSEEEEEE--TTEBHHHHHHHT----------CTTT
T ss_pred EEEEEeccccccccceeeeeccccccccccccccccccccc-cccccccccccccccccccccccc----------cccc
Confidence 57898876544445788999999999999999999999998 667788999999999999999875 1234
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+||+++||+++.
T Consensus 100 ~~~~~~~~i~~~i~~~l~~Lh~~~--iiH~~l~~~nill~~ 138 (259)
T PF07714_consen 100 LSEQQRLSIAIQIAEALSYLHSNN--IIHGNLSPSNILLDS 138 (259)
T ss_dssp SBHHHHHHHHHHHHHHHHHHHHTT--EEEST-SGGGEEEET
T ss_pred cccccccccccccccccccccccc--ccccccccccccccc
Confidence 566677999999999999999999 999999999999985
No 92
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.86 E-value=6.7e-21 Score=123.41 Aligned_cols=117 Identities=22% Similarity=0.381 Sum_probs=94.6
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+.........+.+.+|++++++++|+|++++++++. ..+..++++|++.+++|..++.......... ......
T Consensus 49 va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~-~~~~~~ 126 (296)
T cd05051 49 VAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCT-VDPPLCMIMEYMENGDLNQFLQKHVAETSGL-ACNSKS 126 (296)
T ss_pred EEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe-cCCCcEEEEecCCCCCHHHHHHhcccccccc-cccCCC
Confidence 47787776644445677889999999999999999999998 6678889999999999999997644211111 112345
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 127 ~~~~~~~~~~~~i~~al~~LH~~~--i~H~dlkp~Nili~~ 165 (296)
T cd05051 127 LSFSTLLYMATQIASGMRYLESLN--FVHRDLATRNCLVGK 165 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcC--ccccccchhceeecC
Confidence 677888999999999999999999 999999999999975
No 93
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.86 E-value=8.5e-21 Score=121.39 Aligned_cols=106 Identities=18% Similarity=0.256 Sum_probs=85.5
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+... .....+.+.+|+.+++.++||||+.+++++. +....++++||+.+++|..++.... ..
T Consensus 35 v~~k~~~~~-~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~-----------~~ 101 (262)
T cd05077 35 VILKVLDPS-HRDISLAFFETASMMRQVSHKHIVLLYGVCV-RDVENIMVEEFVEFGPLDLFMHRKS-----------DV 101 (262)
T ss_pred EEEeecChh-hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCCCEEEEecccCCCHHHHHHhcC-----------CC
Confidence 356665543 2234567788899999999999999999998 6667789999999999988876422 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 102 ~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~ 140 (262)
T cd05077 102 LTTPWKFKVAKQLASALSYLEDKD--LVHGNVCTKNILLAR 140 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHhhhCC--eECCCCCcccEEEec
Confidence 455566899999999999999999 999999999999963
No 94
>PHA02988 hypothetical protein; Provisional
Probab=99.85 E-value=4.9e-21 Score=123.86 Aligned_cols=107 Identities=15% Similarity=0.130 Sum_probs=86.7
Q ss_pred CeeeeccCCCCC--cchHHHHHHHHHHhhCCCCCccceeeeeee---CCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNLNL--PFPRHALREYNIHKALDHPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
||||.++..... ...+.+.+|+.++++++||||+++++++.. .....++++||+.+|+|.+++.....
T Consensus 46 vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~------- 118 (283)
T PHA02988 46 VIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKD------- 118 (283)
T ss_pred EEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCC-------
Confidence 588888765211 124677899999999999999999999863 13568899999999999999976433
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~ 121 (122)
+.+.....++.+++.|+.|+|+. + ++||||||+||+++.
T Consensus 119 -----~~~~~~~~i~~~i~~~l~~lH~~~~--~~Hrdlkp~nill~~ 158 (283)
T PHA02988 119 -----LSFKTKLDMAIDCCKGLYNLYKYTN--KPYKNLTSVSFLVTE 158 (283)
T ss_pred -----CChhHHHHHHHHHHHHHHHHHhcCC--CCCCcCChhhEEECC
Confidence 33445589999999999999984 6 889999999999975
No 95
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.85 E-value=6.8e-21 Score=123.14 Aligned_cols=108 Identities=23% Similarity=0.266 Sum_probs=87.7
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|.+.... .......+.+|+.+++.++|++++.+++.+. +.+..++++||+.+|+|...+.....
T Consensus 28 ~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~~~~~~~---------- 96 (285)
T cd05631 28 YACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYE-TKDALCLVLTIMNGGDLKFHIYNMGN---------- 96 (285)
T ss_pred EEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEc-cCCeEEEEEEecCCCcHHHHHHhhCC----------
Confidence 5788776542 1223356788999999999999999999998 67789999999999999877754221
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..+..++.|++.|+.|||+.+ ++||||||+||++++
T Consensus 97 ~~~~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nill~~ 137 (285)
T cd05631 97 PGFDEQRAIFYAAELCCGLEDLQRER--IVYRDLKPENILLDD 137 (285)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECC
Confidence 23455666899999999999999999 999999999999974
No 96
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.85 E-value=1.2e-20 Score=120.87 Aligned_cols=107 Identities=22% Similarity=0.375 Sum_probs=90.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+.........+.+..|+.+++.++||||+++.+.+. +....++++||+.+++|.+++.... ..
T Consensus 35 vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~ 102 (269)
T cd05065 35 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-KSRPVMIITEFMENGALDSFLRQND-----------GQ 102 (269)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEEC-CCCceEEEEecCCCCcHHHHHhhCC-----------CC
Confidence 57888776544445678899999999999999999999987 6777889999999999999887532 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+.+++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 103 ~~~~~~~~i~~~l~~al~~lH~~g--~~H~dl~p~nili~~ 141 (269)
T cd05065 103 FTVIQLVGMLRGIAAGMKYLSEMN--YVHRDLAARNILVNS 141 (269)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--EeecccChheEEEcC
Confidence 455666899999999999999999 999999999999864
No 97
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.85 E-value=3.7e-21 Score=126.60 Aligned_cols=106 Identities=24% Similarity=0.332 Sum_probs=88.0
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
+|+|+++... .....+.+.+|+.++.++ +|++|+.+++++. +.+.++++|||+++|+|...+...+.
T Consensus 23 ~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~--------- 92 (327)
T cd05617 23 YAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQ-TTSRLFLVIEYVNGGDLMFHMQRQRK--------- 92 (327)
T ss_pred EEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcCC---------
Confidence 5788887652 223456678899999888 6999999999998 77889999999999999888765433
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 93 ---l~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nili~~ 131 (327)
T cd05617 93 ---LPEEHARFYAAEICIALNFLHERG--IIYRDLKLDNVLLDA 131 (327)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEeC
Confidence 445555899999999999999999 999999999999975
No 98
>KOG0578|consensus
Probab=99.85 E-value=2e-21 Score=131.34 Aligned_cols=104 Identities=22% Similarity=0.389 Sum_probs=90.3
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||||.+... .+...+-+.+|+.+|+..+|+|||.++..|. -.+.+|+|||||+||+|.+.+... .
T Consensus 301 VaiK~m~l~-~Q~~keLilnEi~Vm~~~~H~NiVnfl~Syl-v~deLWVVMEym~ggsLTDvVt~~-------------~ 365 (550)
T KOG0578|consen 301 VAIKRMDLR-KQPKKELLLNEILVMRDLHHPNIVNFLDSYL-VGDELWVVMEYMEGGSLTDVVTKT-------------R 365 (550)
T ss_pred EEEEEEEec-cCCchhhhHHHHHHHHhccchHHHHHHHHhc-ccceeEEEEeecCCCchhhhhhcc-------------c
Confidence 678887766 2345567789999999999999999999998 568899999999999999988753 3
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+.++..+.++++.||.|||..+ |+|||||.+|||++.
T Consensus 366 ~~E~qIA~Icre~l~aL~fLH~~g--IiHrDIKSDnILL~~ 404 (550)
T KOG0578|consen 366 MTEGQIAAICREILQGLKFLHARG--IIHRDIKSDNILLTM 404 (550)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcc--eeeeccccceeEecc
Confidence 556677899999999999999999 999999999999975
No 99
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.85 E-value=4.1e-21 Score=126.03 Aligned_cols=106 Identities=32% Similarity=0.473 Sum_probs=83.9
Q ss_pred CeeeeccCCC--CCcchHHHHHHHH-HHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYN-IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
||+|++.+.. .......+..|.. +++.++|+||+.+++.+. +.+..+++|||+++++|...+.....
T Consensus 23 ~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~--------- 92 (321)
T cd05603 23 YAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQ-TAEKLYFVLDYVNGGELFFHLQRERC--------- 92 (321)
T ss_pred EEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEE-cCCEEEEEEcCCCCCCHHHHHHHcCC---------
Confidence 5788876541 2223345555654 577889999999999988 77889999999999999887765433
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 93 ---~~~~~~~~~~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~~ 131 (321)
T cd05603 93 ---FLEPRARFYAAEVASAIGYLHSLN--IIYRDLKPENILLDS 131 (321)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECC
Confidence 344455889999999999999999 999999999999975
No 100
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.85 E-value=1.1e-20 Score=123.82 Aligned_cols=106 Identities=20% Similarity=0.244 Sum_probs=87.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.++........+.+.+|+.+++.++|+||+.+++.+. . ...++++||+.+|+|.+++.... ..
T Consensus 39 vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~-~-~~~~~v~e~~~~g~l~~~l~~~~-----------~~ 105 (316)
T cd05108 39 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-T-STVQLITQLMPFGCLLDYVREHK-----------DN 105 (316)
T ss_pred EEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEc-C-CCceeeeecCCCCCHHHHHHhcc-----------cc
Confidence 47888875544455678889999999999999999999997 3 34668999999999999887532 12
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 106 ~~~~~~~~~~~qi~~~L~~LH~~~--iiH~dlkp~Nill~~ 144 (316)
T cd05108 106 IGSQYLLNWCVQIAKGMNYLEERR--LVHRDLAARNVLVKT 144 (316)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEecC
Confidence 445556899999999999999999 999999999999975
No 101
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.85 E-value=5.3e-21 Score=125.62 Aligned_cols=106 Identities=30% Similarity=0.454 Sum_probs=84.3
Q ss_pred CeeeeccCCC--CCcchHHHHHHHH-HHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYN-IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
||+|++.... .......+..|.. +++.++||||+.+++.+. +.+..+++|||+.+|+|..++...+.+
T Consensus 23 vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~-------- 93 (323)
T cd05575 23 YAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ-TADKLYFVLDYVNGGELFFHLQRERSF-------- 93 (323)
T ss_pred EEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEE-eCCEEEEEEcCCCCCCHHHHHHhcCCC--------
Confidence 5788886541 1223345555555 457789999999999998 778899999999999999888764433
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..+..++.|++.|+.|||+.+ ++||||||+|||++.
T Consensus 94 ----~~~~~~~~~~qi~~~l~~lH~~g--ivH~dikp~NIll~~ 131 (323)
T cd05575 94 ----PEPRARFYAAEIASALGYLHSLN--IIYRDLKPENILLDS 131 (323)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECC
Confidence 34455889999999999999999 999999999999975
No 102
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.85 E-value=9.3e-21 Score=123.72 Aligned_cols=106 Identities=26% Similarity=0.415 Sum_probs=87.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+...........+.+|+++++.++||||+.+++++. ..+..++++||+++++|.+++...+.
T Consensus 29 ~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~ey~~~~~L~~~l~~~~~------------ 95 (308)
T cd06615 29 MARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKAGR------------ 95 (308)
T ss_pred EEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-eCCEEEEEeeccCCCcHHHHHHhcCC------------
Confidence 35676665433334567889999999999999999999998 67889999999999999999876433
Q ss_pred CChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~ 121 (122)
+++..+..++.|++.|+.|||+ .+ ++|+|++|+||+++.
T Consensus 96 ~~~~~~~~~~~~i~~~l~~lH~~~~--i~H~dl~p~nil~~~ 135 (308)
T cd06615 96 IPENILGKISIAVLRGLTYLREKHK--IMHRDVKPSNILVNS 135 (308)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhCC--EEECCCChHHEEEec
Confidence 3445558999999999999998 47 999999999999974
No 103
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.85 E-value=5.5e-21 Score=126.00 Aligned_cols=107 Identities=22% Similarity=0.278 Sum_probs=88.4
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|++.+. ......+.+.+|..++..++|+||+.+++++. +.+..+++|||+.+|+|.+++....
T Consensus 29 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~----------- 96 (331)
T cd05597 29 YAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQ-DENNLYLVMDYYVGGDLLTLLSKFE----------- 96 (331)
T ss_pred EEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEe-cCCeEEEEEecCCCCcHHHHHHHhc-----------
Confidence 578888653 12334466788999999999999999999998 7788999999999999999986522
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..+..++.|++.|+.|||+.+ ++||||||+|||++.
T Consensus 97 ~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~ 137 (331)
T cd05597 97 DRLPEDMARFYLAEMVLAIDSVHQLG--YVHRDIKPDNVLLDK 137 (331)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCC--eEECCCCHHHEEECC
Confidence 23445556889999999999999999 999999999999964
No 104
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.85 E-value=1.6e-20 Score=121.04 Aligned_cols=106 Identities=23% Similarity=0.239 Sum_probs=87.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.++..........+.+|+++++.++|+||+++++.+... ....+++|||+.+++|.+++...
T Consensus 36 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~------------- 102 (283)
T cd05080 36 VAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKH------------- 102 (283)
T ss_pred EEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHc-------------
Confidence 4778877653334557788999999999999999999987633 34688999999999999888642
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+.+++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 103 ~l~~~~~~~i~~~l~~~l~~lH~~~--i~H~dlkp~Nili~~ 142 (283)
T cd05080 103 KLNLAQLLLFAQQICEGMAYLHSQH--YIHRDLAARNVLLDN 142 (283)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC--eeccccChheEEEcC
Confidence 3455666999999999999999999 999999999999975
No 105
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.85 E-value=9.9e-21 Score=120.37 Aligned_cols=92 Identities=25% Similarity=0.288 Sum_probs=79.9
Q ss_pred hHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHH
Q psy4991 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVV 94 (122)
Q Consensus 15 ~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 94 (122)
...+.+|+.+++.++|+|++.+++.+. . ...++++||+++|+|.+++..... .+.+..+..++.|++
T Consensus 45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~-~-~~~~lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~~~i~ 111 (259)
T cd05037 45 SLAFFETASLMSQLSHKHLVKLYGVCV-R-DENIMVEEYVKFGPLDVFLHREKN-----------NVSLHWKLDVAKQLA 111 (259)
T ss_pred HHHHHHHHHHHHcCCCcchhheeeEEe-c-CCcEEEEEcCCCCcHHHHHHhhcc-----------CCCHHHHHHHHHHHH
Confidence 578889999999999999999999997 4 667899999999999999876431 344455689999999
Q ss_pred HHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 95 SALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 95 ~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.|+.|||+.+ ++|+||||+||+++.
T Consensus 112 ~~l~~LH~~~--i~H~dlkp~Nill~~ 136 (259)
T cd05037 112 SALHYLEDKK--LVHGNVCGKNILVAR 136 (259)
T ss_pred HHHHHHhhCC--eecccCccceEEEec
Confidence 9999999999 999999999999974
No 106
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.85 E-value=6.4e-21 Score=125.48 Aligned_cols=107 Identities=21% Similarity=0.292 Sum_probs=88.8
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|+++... .....+.+.+|+.+++.++|+||+.+++.+. +....+++|||+++|+|.+++....
T Consensus 29 ~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~----------- 96 (330)
T cd05601 29 YAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQ-DKDNLYLVMEYQPGGDLLSLLNRYE----------- 96 (330)
T ss_pred EEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEe-cCCeEEEEECCCCCCCHHHHHHHhc-----------
Confidence 5788887542 2234566788999999999999999999998 6778999999999999999987641
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 97 ~~l~~~~~~~~~~qi~~aL~~lH~~~--i~H~Dlkp~NIll~~ 137 (330)
T cd05601 97 DQFDEDMAQFYLAELVLAIHSVHQMG--YVHRDIKPENVLIDR 137 (330)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC--eEcccCchHheEECC
Confidence 23455556889999999999999999 999999999999975
No 107
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.85 E-value=1.3e-20 Score=123.13 Aligned_cols=108 Identities=18% Similarity=0.177 Sum_probs=91.0
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|+++.. ........+.+|+.+++.++|+||+.+++++. +....++++||+++++|..++..... .
T Consensus 28 ~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~-~~~~~~~~~e~~~~~~l~~~l~~~~~----------~ 96 (314)
T cd08216 28 VAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFI-VDSELYVVSPLMAYGSCEDLLKTHFP----------E 96 (314)
T ss_pred EEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheee-cCCeEEEEEeccCCCCHHHHHHHhcc----------c
Confidence 588888765 33445678899999999999999999999998 67788999999999999998875321 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 97 ~~~~~~~~~~~~~l~~~L~~LH~~~--ivH~dlk~~Nili~~ 136 (314)
T cd08216 97 GLPELAIAFILKDVLNALDYIHSKG--FIHRSVKASHILLSG 136 (314)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCcceEEEec
Confidence 3455566889999999999999999 999999999999975
No 108
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.85 E-value=1.3e-20 Score=121.18 Aligned_cols=116 Identities=19% Similarity=0.253 Sum_probs=90.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+...........+.+|+.+++.++|+||+++++.+. .....++++||+++++|.+++.......... .....
T Consensus 39 ~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~--~~~~~ 115 (277)
T cd05062 39 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS-QGQPTLVIMELMTRGDLKSYLRSLRPEMENN--PVQAP 115 (277)
T ss_pred EEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCCeEEEEecCCCCCHHHHHHHcCcccccc--ccccC
Confidence 47777765433334567889999999999999999999987 6678899999999999999987533211100 01123
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+..+..++.|++.|+.|||+.+ ++|+||||+||++++
T Consensus 116 ~~~~~~~~~~~~l~~~l~~lH~~~--~vH~dlkp~Nil~~~ 154 (277)
T cd05062 116 PSLKKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAE 154 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--cccCCcchheEEEcC
Confidence 456677899999999999999998 999999999999975
No 109
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.85 E-value=1.5e-20 Score=122.44 Aligned_cols=118 Identities=20% Similarity=0.283 Sum_probs=92.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccch----hHHhhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI----AEREAR 75 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~----~~~~~~ 75 (122)
||+|...........+.+.+|+.+++.+ +|+||+++++.+. .....++++||+.+++|.+++...... ......
T Consensus 50 v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 128 (304)
T cd05101 50 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIAR 128 (304)
T ss_pred EEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe-cCCceEEEEecCCCCcHHHHHHhcCCccccccccccc
Confidence 4667666443333456788999999999 8999999999998 667889999999999999999864321 111111
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.....+.+..+..++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 129 ~~~~~~~~~~~~~~~~qi~~al~~LH~~g--ivH~dlkp~Nili~~ 172 (304)
T cd05101 129 VPDEQMTFKDLVSCTYQVARGMEYLASQK--CIHRDLAARNVLVTE 172 (304)
T ss_pred CCcccccHHHHHHHHHHHHHHHHHHHHCC--eeecccccceEEEcC
Confidence 22345677788999999999999999999 999999999999974
No 110
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.85 E-value=8.1e-21 Score=122.52 Aligned_cols=110 Identities=22% Similarity=0.259 Sum_probs=88.2
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|.+.... .....+.+..|+.+++.++|+||+.+.+++. .....+++|||+++|+|...+..... ..
T Consensus 21 ~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~g~L~~~~~~~~~--------~~ 91 (280)
T cd05608 21 YACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQ-TKTDLCLVMTIMNGGDLRYHIYNVDE--------EN 91 (280)
T ss_pred EEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEc-CCCeEEEEEeCCCCCCHHHHHHhccc--------cC
Confidence 5788776542 1223456778999999999999999999988 66788999999999999877753211 11
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 92 ~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~ 132 (280)
T cd05608 92 PGFPEPRACFYTAQIISGLEHLHQRR--IIYRDLKPENVLLDN 132 (280)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECC
Confidence 34566777999999999999999999 999999999999975
No 111
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.85 E-value=1.2e-20 Score=122.99 Aligned_cols=117 Identities=19% Similarity=0.246 Sum_probs=91.9
Q ss_pred eeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh----hh
Q psy4991 2 CAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA----RC 76 (122)
Q Consensus 2 avK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~----~~ 76 (122)
|+|.++..........+.+|+.++.++ +|+||+++++.+. ..+..++++||+++++|.+++...+....... ..
T Consensus 38 ~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 116 (303)
T cd05088 38 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 116 (303)
T ss_pred EEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC-CCCCceEEEEeCCCCcHHHHHHhccccccccccccccc
Confidence 556555443334456788899999999 8999999999998 66778999999999999999986543221111 11
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
....+.+..++.++.|++.|+.|||+.+ ++|+||||+||++++
T Consensus 117 ~~~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dlkp~Nili~~ 159 (303)
T cd05088 117 TASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGE 159 (303)
T ss_pred ccCcCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEecC
Confidence 1235677888999999999999999999 999999999999974
No 112
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.85 E-value=8.6e-21 Score=126.86 Aligned_cols=105 Identities=28% Similarity=0.326 Sum_probs=86.5
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|++... ......+.+.+|+.+++.++||||+++++++. +.+..+++|||+++|+|.+++...
T Consensus 71 ~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~-~~~~~~lv~Ey~~gg~L~~~~~~~------------ 137 (371)
T cd05622 71 YAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-DDRYLYMVMEYMPGGDLVNLMSNY------------ 137 (371)
T ss_pred EEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-cCCEEEEEEcCCCCCcHHHHHHhc------------
Confidence 477877643 12233456778999999999999999999998 778899999999999999988642
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+++..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 138 -~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NIll~~ 177 (371)
T cd05622 138 -DVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDK 177 (371)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHEEECC
Confidence 2344455889999999999999999 999999999999975
No 113
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.85 E-value=1.7e-20 Score=126.52 Aligned_cols=118 Identities=20% Similarity=0.256 Sum_probs=92.5
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHH-------
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER------- 72 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~------- 72 (122)
||+|+++........+.+.+|+.++..+. |+||+.+++++. ..+..++++||+.+|+|.+++...+.....
T Consensus 70 vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~-~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~ 148 (401)
T cd05107 70 VAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT-KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNR 148 (401)
T ss_pred EEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc-cCCCcEEEEeccCCCcHHHHHHhccccchhhhccccc
Confidence 58899986644444567889999999997 999999999998 667789999999999999999754320000
Q ss_pred -------------------------------------------------------------------------------h
Q psy4991 73 -------------------------------------------------------------------------------E 73 (122)
Q Consensus 73 -------------------------------------------------------------------------------~ 73 (122)
.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (401)
T cd05107 149 DDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDT 228 (401)
T ss_pred ccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhh
Confidence 0
Q ss_pred hhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.......+.+..+..++.|++.|+.|||+.+ ++|+|+||+||++++
T Consensus 229 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrdlkp~NiLl~~ 274 (401)
T cd05107 229 LINESPALSYMDLVGFSYQVANGMEFLASKN--CVHRDLAARNVLICE 274 (401)
T ss_pred hhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--cCcccCCcceEEEeC
Confidence 0001123556678899999999999999998 999999999999975
No 114
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.85 E-value=6.9e-21 Score=125.18 Aligned_cols=106 Identities=29% Similarity=0.472 Sum_probs=84.3
Q ss_pred CeeeeccCCC--CCcchHHHHHHHH-HHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYN-IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
+|+|++.... .......+..|.. +++.++||||+.+++.+. ..+..+++|||+.+|+|...+...+.
T Consensus 23 ~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~--------- 92 (325)
T cd05604 23 YAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ-TTEKLYFVLDFVNGGELFFHLQRERS--------- 92 (325)
T ss_pred EEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEe-cCCEEEEEEcCCCCCCHHHHHHHcCC---------
Confidence 5788876541 2223345556655 466789999999999998 77889999999999999888765433
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 93 ---~~~~~~~~~~~qi~~al~~lH~~g--ivH~Dlkp~NIll~~ 131 (325)
T cd05604 93 ---FPEPRARFYAAEIASALGYLHSIN--IVYRDLKPENILLDS 131 (325)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECC
Confidence 444555899999999999999999 999999999999975
No 115
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.85 E-value=1e-20 Score=122.34 Aligned_cols=108 Identities=23% Similarity=0.276 Sum_probs=88.1
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|.+.... .......+.+|+.+++.++|+||+.+++.+. +.+..+++|||+.+|+|...+.....
T Consensus 28 vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~---------- 96 (285)
T cd05605 28 YACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE-TKDALCLVLTLMNGGDLKFHIYNMGN---------- 96 (285)
T ss_pred EEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeec-CCCeEEEEEeccCCCcHHHHHHhcCc----------
Confidence 5788876542 1223355778999999999999999999998 66789999999999999887754221
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+++..+..++.|++.|+.|||+.+ ++|+||||+||++++
T Consensus 97 ~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~ 137 (285)
T cd05605 97 PGFDEERAVFYAAEITCGLEDLHRER--IVYRDLKPENILLDD 137 (285)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHEEECC
Confidence 23556667899999999999999999 999999999999874
No 116
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.85 E-value=2e-20 Score=119.90 Aligned_cols=109 Identities=18% Similarity=0.254 Sum_probs=87.1
Q ss_pred eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCC
Q psy4991 2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPY 81 (122)
Q Consensus 2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 81 (122)
++|.+.........+.+.+|+.+++.++|||++++++.+. +....+++|||+.+|+|.+++...... ....
T Consensus 26 ~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~--------~~~~ 96 (268)
T cd05086 26 VVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCV-EAIPYLLVFEYCELGDLKSYLSQEQWH--------RRNS 96 (268)
T ss_pred EEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEec-CCCccEEEEecCCCCcHHHHHHhhhcc--------cccc
Confidence 3455444433345678899999999999999999999998 667889999999999999998753221 1123
Q ss_pred ChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 82 LSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 82 ~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
....++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 97 ~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nil~~~ 134 (268)
T cd05086 97 QLLLLQRMACEIAAGVTHMHKHN--FLHSDLALRNCFLTS 134 (268)
T ss_pred cHHHHHHHHHHHHHHHHHHHHCC--eeccCCccceEEEcC
Confidence 44456789999999999999999 999999999999864
No 117
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.85 E-value=7.1e-21 Score=124.83 Aligned_cols=106 Identities=24% Similarity=0.344 Sum_probs=87.9
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
||+|++++.. .......+.+|..+++.+ +|+||+.+++++. +.+..+++|||+.+|+|...+...+.
T Consensus 23 ~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~--------- 92 (318)
T cd05570 23 YAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQ-TKDRLFFVMEYVNGGDLMFHIQRSGR--------- 92 (318)
T ss_pred EEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE-cCCEEEEEEcCCCCCCHHHHHHHcCC---------
Confidence 5788887542 233456677889988888 7999999999998 77889999999999999888765433
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+++..+..++.|++.|+.|||+.+ ++|+||||+||++++
T Consensus 93 ---l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~ 131 (318)
T cd05570 93 ---FDEPRARFYAAEIVLGLQFLHERG--IIYRDLKLDNVLLDS 131 (318)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHhCC--eEccCCCHHHeEECC
Confidence 445555899999999999999999 999999999999975
No 118
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.85 E-value=7.7e-21 Score=125.19 Aligned_cols=106 Identities=20% Similarity=0.272 Sum_probs=87.2
Q ss_pred CeeeeccCCC---CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991 1 MCAKLLTTNL---NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76 (122)
Q Consensus 1 vavK~~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 76 (122)
||+|++.+.. .....+.+.+|+.++..+ +|++|+.+++++. ..+..+++|||+.+|+|...+.....
T Consensus 31 ~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~-------- 101 (332)
T cd05614 31 YAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQ-TEAKLHLILDYVSGGEMFTHLYQRDN-------- 101 (332)
T ss_pred EEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEe-cCCEEEEEEeCCCCCcHHHHHHHcCC--------
Confidence 4778776431 223456678899999999 5999999999988 67788999999999999998875433
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++||||||+|||++.
T Consensus 102 ----~~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nili~~ 140 (332)
T cd05614 102 ----FSEDEVRFYSGEIILALEHLHKLG--IVYRDIKLENILLDS 140 (332)
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHeEECC
Confidence 344555899999999999999999 999999999999975
No 119
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.85 E-value=8.2e-21 Score=124.48 Aligned_cols=106 Identities=20% Similarity=0.267 Sum_probs=86.2
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
||+|.++... .....+....|..++... +|++|+.+++.+. +.+..+++|||+.+|+|...+.....+
T Consensus 23 ~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-~~~~~~lv~E~~~~g~L~~~i~~~~~~-------- 93 (316)
T cd05620 23 FAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQ-TKEHLFFVMEFLNGGDLMFHIQDKGRF-------- 93 (316)
T ss_pred EEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEE-eCCEEEEEECCCCCCcHHHHHHHcCCC--------
Confidence 5788887642 123445667788888765 8999999999998 678899999999999999888764433
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 94 ----~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nil~~~ 131 (316)
T cd05620 94 ----DLYRATFYAAEIVCGLQFLHSKG--IIYRDLKLDNVMLDR 131 (316)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECC
Confidence 34445889999999999999999 999999999999975
No 120
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.85 E-value=1.8e-20 Score=120.70 Aligned_cols=118 Identities=21% Similarity=0.314 Sum_probs=93.6
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh----hh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA----RC 76 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~----~~ 76 (122)
||+|.+.........+.+.+|+.+++.++|+||+.+++.+. .....++++||+++++|.+++........... ..
T Consensus 38 v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 116 (283)
T cd05048 38 VAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCT-KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDET 116 (283)
T ss_pred EEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEc-CCCceEEEEecCCCCcHHHHHHhcCCCccccccccccc
Confidence 46777765544445567889999999999999999999998 66778899999999999999976433211111 11
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
....+.+..++.++.|++.|+.|||+.+ ++|+||||+||++++
T Consensus 117 ~~~~l~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nil~~~ 159 (283)
T cd05048 117 VKSSLDCSDFLHIAIQIAAGMEYLSSHH--FVHRDLAARNCLVGE 159 (283)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccccceEEEcC
Confidence 1235677788999999999999999999 999999999999975
No 121
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.85 E-value=1.7e-20 Score=121.40 Aligned_cols=116 Identities=22% Similarity=0.268 Sum_probs=90.6
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+...........+.+|+.+++.++|+||+++++.+. .....+++|||+.+|+|.+++.......... .....
T Consensus 39 vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~ 115 (288)
T cd05061 39 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS-KGQPTLVVMELMAHGDLKSYLRSLRPEAENN--PGRPP 115 (288)
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCCcEEEEeCCCCCCHHHHHHHhccccccC--CCCCC
Confidence 47787765533334456788999999999999999999987 6677899999999999999997643211110 11233
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.....+..++.|++.|+.|||+.+ ++|+|+||+||+++.
T Consensus 116 ~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dikp~nili~~ 154 (288)
T cd05061 116 PTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAH 154 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--CcCCCCChheEEEcC
Confidence 445667889999999999999999 999999999999975
No 122
>KOG0666|consensus
Probab=99.85 E-value=2e-21 Score=124.33 Aligned_cols=110 Identities=26% Similarity=0.426 Sum_probs=93.5
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|.++.. ...+......+|+.+++.++|+|++++..++......+++++||.+ .+|+++++.+..-. ..
T Consensus 56 yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAE-hDL~~II~fHr~~~-------~~ 127 (438)
T KOG0666|consen 56 YAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAE-HDLWHIIKFHRASK-------AK 127 (438)
T ss_pred hHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhh-hhHHHHHHHhccch-------hc
Confidence 467777755 2345778999999999999999999999999745788999999998 89999998765421 13
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
.++...+..++-||+.|+.|||++. ++||||||+|||+.
T Consensus 128 ~lp~~mvKsilwQil~Gv~YLH~NW--vlHRDLKPaNIlvm 166 (438)
T KOG0666|consen 128 QLPRSMVKSILWQILDGVHYLHSNW--VLHRDLKPANILVM 166 (438)
T ss_pred cCCHHHHHHHHHHHHhhhHHHhhhh--eeeccCCcceEEEe
Confidence 6677888999999999999999999 99999999999986
No 123
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.85 E-value=2.5e-20 Score=120.35 Aligned_cols=108 Identities=20% Similarity=0.255 Sum_probs=89.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.++..........+.+|+.+++.++|+|++.+.+++... ....++++||+++++|.+++.... .
T Consensus 36 va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-----------~ 104 (284)
T cd05079 36 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNK-----------N 104 (284)
T ss_pred EEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhcc-----------C
Confidence 5788877554444567789999999999999999999988733 356889999999999999886432 1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.++.|+|+.+ ++|+|+||+||+++.
T Consensus 105 ~~~~~~~~~i~~~i~~aL~~lH~~g--i~H~dlkp~Nil~~~ 144 (284)
T cd05079 105 KINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVES 144 (284)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC--eeecccchheEEEcC
Confidence 3455666899999999999999999 999999999999864
No 124
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.85 E-value=1.6e-20 Score=122.30 Aligned_cols=108 Identities=21% Similarity=0.297 Sum_probs=89.5
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.++........+.+.+|+.+++++ +|+||+++++.+. ..+..++++||+.+|+|..++..... .
T Consensus 68 vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~----------~ 136 (302)
T cd05055 68 VAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACT-IGGPILVITEYCCYGDLLNFLRRKRE----------S 136 (302)
T ss_pred EEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEe-cCCceEEEEEcCCCCcHHHHHHhCCC----------C
Confidence 4677776553334456788999999999 7999999999988 66788999999999999998865321 1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+.++..++.|++.|+.|||+.+ ++|+|+||+||+++.
T Consensus 137 ~l~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~ 176 (302)
T cd05055 137 FLTLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNVLLTH 176 (302)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC--eehhhhccceEEEcC
Confidence 2456667999999999999999999 999999999999874
No 125
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.85 E-value=1.1e-20 Score=123.99 Aligned_cols=106 Identities=21% Similarity=0.312 Sum_probs=86.6
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
||+|+++... .....+....|..++... +||||+.+++++. +.+.++++|||+++|+|...+.....
T Consensus 23 vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~-~~~~~~lv~ey~~~g~L~~~l~~~~~--------- 92 (316)
T cd05619 23 FAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQ-TKENLFFVMEYLNGGDLMFHIQSCHK--------- 92 (316)
T ss_pred EEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcCC---------
Confidence 5888887652 233445667788888765 9999999999998 67789999999999999998875433
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 93 ---~~~~~~~~~~~qi~~al~~LH~~~--ivHrdikp~Nil~~~ 131 (316)
T cd05619 93 ---FDLPRATFYAAEIICGLQFLHSKG--IVYRDLKLDNILLDT 131 (316)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECC
Confidence 344455889999999999999999 999999999999975
No 126
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.85 E-value=8.5e-21 Score=122.52 Aligned_cols=106 Identities=21% Similarity=0.371 Sum_probs=85.7
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|++.... .....+.+.+|+.+++.++|+||+.+++++. ..+..+++|||+.++.+..+.... .
T Consensus 29 ~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~------------~ 95 (287)
T cd07848 29 VAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFR-RRGKLYLVFEYVEKNMLELLEEMP------------N 95 (287)
T ss_pred EEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEe-cCCEEEEEEecCCCCHHHHHHhcC------------C
Confidence 5788887552 2334577889999999999999999999998 677899999999976665443322 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 96 ~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nill~~ 135 (287)
T cd07848 96 GVPPEKVRSYIYQLIKAIHWCHKND--IVHRDIKPENLLISH 135 (287)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcC
Confidence 3455566899999999999999999 999999999999974
No 127
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.85 E-value=3.5e-20 Score=118.43 Aligned_cols=106 Identities=25% Similarity=0.302 Sum_probs=87.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+... ......+.+|+++++.++|+|++.+++.+. .....++++||+++++|.+++..... ..
T Consensus 34 ~~~K~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~----------~~ 100 (263)
T cd05052 34 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNR----------QE 100 (263)
T ss_pred EEEEEecCC--chHHHHHHHHHHHHHhCCCCChhheEEEEc-CCCCcEEEEEeCCCCcHHHHHHhCCC----------CC
Confidence 467776644 223567889999999999999999999998 66778899999999999998865321 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+||||+||++++
T Consensus 101 l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~nil~~~ 139 (263)
T cd05052 101 VNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGE 139 (263)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcC
Confidence 455666899999999999999999 999999999999964
No 128
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.85 E-value=1.8e-20 Score=120.63 Aligned_cols=113 Identities=22% Similarity=0.236 Sum_probs=91.3
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.............+.+|+.+++.++|+||+++++.+. +....++++||+.+++|.+++...+.... ....
T Consensus 39 v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~g~~L~~~i~~~~~~~~-----~~~~ 112 (277)
T cd05036 39 VAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSF-ERLPRFILLELMAGGDLKSFLRENRPRPE-----RPSS 112 (277)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-cCCCcEEEEecCCCCCHHHHHHHhCCCCC-----CCCC
Confidence 46676665433334567889999999999999999999887 56677899999999999999876542111 1234
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 113 ~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~nil~~~ 151 (277)
T cd05036 113 LTMKDLLFCARDVAKGCKYLEENH--FIHRDIAARNCLLTC 151 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--EeecccchheEEEec
Confidence 677788999999999999999999 999999999999963
No 129
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.85 E-value=1.4e-20 Score=123.86 Aligned_cols=108 Identities=14% Similarity=0.188 Sum_probs=89.5
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|+..... .....+.+.+|+.+++.++|+||+++++++. .++..++++||+.++++..++..... .
T Consensus 28 vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~-~~~~~~~v~e~~~~~~l~~~l~~~~~----------~ 96 (328)
T cd08226 28 VTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFT-TGSWLWVISPFMAYGSANSLLKTYFP----------E 96 (328)
T ss_pred EEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEe-cCCceEEEEecccCCCHHHHHHhhcc----------c
Confidence 5788877542 2234467788999999999999999999998 67788999999999999988875322 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..+..++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 97 ~~~~~~~~~~~~qi~~aL~~lH~~~--ivHrDlkp~Nill~~ 136 (328)
T cd08226 97 GMSEALIGNILFGALRGLNYLHQNG--YIHRNIKASHILISG 136 (328)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEeC
Confidence 3556666899999999999999999 999999999999874
No 130
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.85 E-value=2.8e-20 Score=119.34 Aligned_cols=117 Identities=19% Similarity=0.246 Sum_probs=91.7
Q ss_pred eeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHh----hhh
Q psy4991 2 CAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE----ARC 76 (122)
Q Consensus 2 avK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~----~~~ 76 (122)
|+|.++........+.+.+|+.+++++ +||||+++++.+. ..+..+++|||+++++|.+++.......... ...
T Consensus 26 ~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~ 104 (270)
T cd05047 26 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 104 (270)
T ss_pred EEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEe-cCCCceEEEEeCCCCcHHHHHHhccccccccccccccC
Confidence 566666443334556788999999999 8999999999998 6677889999999999999997644321110 011
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
....+.+.++..++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 105 ~~~~l~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nili~~ 147 (270)
T cd05047 105 TASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGE 147 (270)
T ss_pred CcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccccceEEEcC
Confidence 1234677888999999999999999999 999999999999974
No 131
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.84 E-value=3.9e-20 Score=117.89 Aligned_cols=105 Identities=22% Similarity=0.320 Sum_probs=88.3
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+... ....+.+.+|+.++++++||||+++++++. .....++++||+.+++|.+++.... ..
T Consensus 31 ~aik~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~i~~~~-----------~~ 96 (256)
T cd05113 31 VAIKMIKEG--SMSEDEFIEEAKVMMKLSHEKLVQLYGVCT-KQRPIYIVTEYMSNGCLLNYLREHG-----------KR 96 (256)
T ss_pred EEEEEcCCC--cccHHHHHHHHHHHhcCCCCCeeeEEEEEc-cCCCcEEEEEcCCCCcHHHHHHhcC-----------CC
Confidence 478877654 223467899999999999999999999997 6677899999999999999887532 13
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 97 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~nili~~ 135 (256)
T cd05113 97 FQPSQLLEMCKDVCEGMAYLESKQ--FIHRDLAARNCLVDD 135 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcC
Confidence 456677999999999999999999 999999999999874
No 132
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.84 E-value=3.7e-20 Score=117.83 Aligned_cols=105 Identities=23% Similarity=0.321 Sum_probs=87.3
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+... ....+++.+|+.+++.++||||+++++.+. .....+++|||+.+|+|.+++.... ..
T Consensus 31 ~a~K~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~iv~e~~~~~~L~~~~~~~~-----------~~ 96 (256)
T cd05114 31 VAIKAINEG--AMSEEDFIEEAKVMMKLSHPKLVQLYGVCT-QQKPLYIVTEFMENGCLLNYLRQRQ-----------GK 96 (256)
T ss_pred EEEEecccC--CccHHHHHHHHHHHHHCCCCCceeEEEEEc-cCCCEEEEEEcCCCCcHHHHHHhCc-----------cC
Confidence 467776644 223567889999999999999999999998 6778899999999999998886432 12
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 97 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~ 135 (256)
T cd05114 97 LSKDMLLSMCQDVCEGMEYLERNS--FIHRDLAARNCLVSS 135 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcceEEEcC
Confidence 445566899999999999999999 999999999999974
No 133
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.84 E-value=1.2e-20 Score=124.35 Aligned_cols=106 Identities=24% Similarity=0.373 Sum_probs=84.8
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC----CeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA----NSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
||+|.+.... .......+.+|+.+++.++||||+.+++++.... ...++++||+. ++|.+.+.....
T Consensus 28 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~------- 99 (338)
T cd07859 28 VAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKANDD------- 99 (338)
T ss_pred EEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHhccc-------
Confidence 5788877542 2234456889999999999999999999885221 35789999996 789888875433
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++|+||||+|||++.
T Consensus 100 -----~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~ 138 (338)
T cd07859 100 -----LTPEHHQFFLYQLLRALKYIHTAN--VFHRDLKPKNILANA 138 (338)
T ss_pred -----CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECC
Confidence 344555899999999999999999 999999999999975
No 134
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.84 E-value=2.1e-20 Score=120.56 Aligned_cols=118 Identities=20% Similarity=0.252 Sum_probs=91.1
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHh-----hh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE-----AR 75 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~-----~~ 75 (122)
+|+|.+...........+.+|+.+++.++|+||+++++.+. .....+++|||+.+++|.+++.......... ..
T Consensus 37 ~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 115 (283)
T cd05090 37 VAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT-QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDG 115 (283)
T ss_pred EEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe-cCCceEEEEEcCCCCcHHHHHHhcCCCCcccccccccc
Confidence 46677765433334467889999999999999999999987 6778899999999999999986432211000 00
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.....+.+..+..++.|++.|+.|||+.+ ++|+|+||+||+++.
T Consensus 116 ~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~nili~~ 159 (283)
T cd05090 116 TVKSSLDHGDFLHIAIQIAAGMEYLSSHF--FVHKDLAARNILIGE 159 (283)
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHHhcC--eehhccccceEEEcC
Confidence 11234677788999999999999999999 999999999999975
No 135
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.84 E-value=1.6e-20 Score=121.50 Aligned_cols=118 Identities=24% Similarity=0.387 Sum_probs=92.0
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHH--------
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER-------- 72 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~-------- 72 (122)
+|+|.+.........+.+.+|+.+++.++||||+++++.+. ..+..++++||+.+++|.+++.........
T Consensus 33 ~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 111 (290)
T cd05045 33 VAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACS-QDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNR 111 (290)
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEe-cCCCcEEEEEecCCCCHHHHHHhcCCcccccccccccc
Confidence 35666665533334567889999999999999999999988 667788999999999999998754321110
Q ss_pred ----hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 73 ----EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 73 ----~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
........+.+..++.++.|++.|+.|||+.+ ++|+||||+||++++
T Consensus 112 ~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--ivH~dikp~nill~~ 162 (290)
T cd05045 112 NSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK--LVHRDLAARNVLVAE 162 (290)
T ss_pred ccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC--eehhhhhhheEEEcC
Confidence 01111235677888999999999999999999 999999999999974
No 136
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.84 E-value=2.3e-20 Score=120.85 Aligned_cols=118 Identities=20% Similarity=0.296 Sum_probs=93.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh----h
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA----R 75 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~----~ 75 (122)
+|+|.+...........+.+|+.+++++ +|+||+++++.+. ..+..++++||+++|+|..++........... .
T Consensus 45 ~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~-~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 123 (293)
T cd05053 45 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT-QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPR 123 (293)
T ss_pred EEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc-CCCCeEEEEEeCCCCcHHHHHHhcCCCcccccccccc
Confidence 4677777553333456688999999999 8999999999998 66778999999999999999976433211111 1
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.....+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 124 ~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivH~dlkp~Nil~~~ 167 (293)
T cd05053 124 PPEETLTQKDLVSFAYQVARGMEFLASKK--CIHRDLAARNVLVTE 167 (293)
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHCC--ccccccceeeEEEcC
Confidence 12345778888999999999999999999 999999999999874
No 137
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.84 E-value=1.3e-20 Score=123.86 Aligned_cols=106 Identities=19% Similarity=0.259 Sum_probs=86.0
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCC-CccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHP-RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~-~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
||+|++.... .....+.+..|..++..++|+ +|+.+++++. ..+..+++|||+.+|+|...+.....
T Consensus 28 ~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-~~~~~~lv~E~~~~g~L~~~~~~~~~--------- 97 (324)
T cd05587 28 YAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-TMDRLYFVMEYVNGGDLMYHIQQVGK--------- 97 (324)
T ss_pred EEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEE-cCCEEEEEEcCCCCCcHHHHHHHcCC---------
Confidence 5888887642 233456778899999999765 5778888887 67789999999999999988875443
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++||||||+|||++.
T Consensus 98 ---~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~ 136 (324)
T cd05587 98 ---FKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDA 136 (324)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEEcC
Confidence 334455889999999999999999 999999999999975
No 138
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.84 E-value=2.8e-20 Score=119.44 Aligned_cols=116 Identities=21% Similarity=0.245 Sum_probs=92.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+..+........+.+|+.+++.++|+|++++++.+. .....++++||+++++|.+++......... ......
T Consensus 39 ~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~--~~~~~~ 115 (277)
T cd05032 39 VAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVS-TGQPTLVVMELMAKGDLKSYLRSRRPEAEN--NPGLGP 115 (277)
T ss_pred EEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEc-CCCCcEEEEecCCCCCHHHHHHhcccchhh--ccCCCC
Confidence 47777765543344567889999999999999999999998 667889999999999999999764332211 011234
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 116 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~di~p~nill~~ 154 (277)
T cd05032 116 PTLQKFIQMAAEIADGMAYLAAKK--FVHRDLAARNCMVAE 154 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--ccccccChheEEEcC
Confidence 566778899999999999999999 999999999999975
No 139
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.84 E-value=2.9e-20 Score=123.09 Aligned_cols=119 Identities=20% Similarity=0.275 Sum_probs=91.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh---------
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA--------- 70 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------- 70 (122)
||||.++..........+.+|+.++..+ +|+||+.+++++.......++++||+.+|+|.+++.......
T Consensus 40 vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~ 119 (343)
T cd05103 40 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDAR 119 (343)
T ss_pred EEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccc
Confidence 5889887654344456788999999999 689999999988745667889999999999999987532100
Q ss_pred ------------HH----------------------------------hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCC
Q psy4991 71 ------------ER----------------------------------EARCLSQPYLSTSARSIVMQVVSALKYLNEIK 104 (122)
Q Consensus 71 ------------~~----------------------------------~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ 104 (122)
.. ........+.+..+..++.|++.|+.|||+.+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 199 (343)
T cd05103 120 FRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK 199 (343)
T ss_pred cccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 00 00001123567788899999999999999999
Q ss_pred CCeeeeCCCCCCccccc
Q psy4991 105 PPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 105 ~~i~h~dlk~~nill~~ 121 (122)
++|+||||+||+++.
T Consensus 200 --i~H~dikp~Nil~~~ 214 (343)
T cd05103 200 --CIHRDLAARNILLSE 214 (343)
T ss_pred --eecCCCccCeEEEcC
Confidence 999999999999974
No 140
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.84 E-value=2.4e-20 Score=119.51 Aligned_cols=111 Identities=19% Similarity=0.245 Sum_probs=87.5
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+...........+.+|+.+++.++|+||+++++.+. +....+++|||+++|+|.+++....... ...
T Consensus 25 ~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~-------~~~ 96 (269)
T cd05087 25 VVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCT-EVTPYLLVMEFCPLGDLKGYLRSCRKAE-------LMT 96 (269)
T ss_pred EEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-CCCCcEEEEECCCCCcHHHHHHHhhhcc-------ccc
Confidence 36676665533334457888999999999999999999987 6677889999999999999987532210 112
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+..+..++.|++.++.|||+.+ ++|+|+||+||+++.
T Consensus 97 ~~~~~~~~~~~qi~~al~~lH~~~--i~H~dlkp~nil~~~ 135 (269)
T cd05087 97 PDPTTLQRMACEIALGLLHLHKNN--FIHSDLALRNCLLTA 135 (269)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcC
Confidence 234455788999999999999999 999999999999875
No 141
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.84 E-value=3.4e-20 Score=119.48 Aligned_cols=108 Identities=20% Similarity=0.279 Sum_probs=85.9
Q ss_pred CeeeeccCCC-C-CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL-N-LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~-~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|.+.... . .........|++++++++||||+.+++.+. +....+++|||+.+++|...+.....
T Consensus 21 ~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~-~~~~~~lv~e~~~g~~L~~~~~~~~~---------- 89 (277)
T cd05607 21 YACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFE-SKTHLCLVMSLMNGGDLKYHIYNVGE---------- 89 (277)
T ss_pred EEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEe-cCCeEEEEEecCCCCCHHHHHHhccc----------
Confidence 4677776431 1 112344567999999999999999999998 67889999999999999887754321
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..+..++.|++.|+.|||+.+ ++|+||||+||++++
T Consensus 90 ~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~ 130 (277)
T cd05607 90 RGLEMERVIHYSAQITCGILHLHSMD--IVYRDMKPENVLLDD 130 (277)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHCC--EEEccCChHhEEEcC
Confidence 23445566889999999999999999 999999999999975
No 142
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.84 E-value=9.1e-21 Score=125.88 Aligned_cols=102 Identities=26% Similarity=0.392 Sum_probs=84.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|++.........+.+.+|+++++.++|+||+.+++.+. ..+.+++++||+.+++|.... .
T Consensus 102 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~----------------~ 164 (353)
T PLN00034 102 YALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFD-HNGEIQVLLEFMDGGSLEGTH----------------I 164 (353)
T ss_pred EEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEec-cCCeEEEEEecCCCCcccccc----------------c
Confidence 58888876544445677889999999999999999999998 777889999999999885321 1
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+..+..++.|++.|+.|||+.+ ++|+||||+|||++.
T Consensus 165 ~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~ 203 (353)
T PLN00034 165 ADEQFLADVARQILSGIAYLHRRH--IVHRDIKPSNLLINS 203 (353)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcC
Confidence 223445789999999999999999 999999999999975
No 143
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.84 E-value=4e-20 Score=119.60 Aligned_cols=116 Identities=22% Similarity=0.283 Sum_probs=91.9
Q ss_pred eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHH-hhhhcCCC
Q psy4991 2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER-EARCLSQP 80 (122)
Q Consensus 2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~-~~~~~~~~ 80 (122)
|+|.+... .....+.+.+|+.++++++|+|++.+++.+. ..+..++++||+.+++|.+++...+..... ........
T Consensus 39 ~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 116 (288)
T cd05093 39 AVKTLKDA-SDNARKDFHREAELLTNLQHEHIVKFYGVCV-EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAE 116 (288)
T ss_pred EEEecCCc-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCC
Confidence 55655543 2234567889999999999999999999998 677889999999999999999765431111 11112235
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+++..++.++.|++.++.|||+.+ ++|+|+||+||++++
T Consensus 117 l~~~~~~~~~~ql~~aL~~lH~~~--i~H~dlkp~Nili~~ 155 (288)
T cd05093 117 LTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGE 155 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEEEcc
Confidence 788888999999999999999999 999999999999975
No 144
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.84 E-value=1.4e-20 Score=123.68 Aligned_cols=106 Identities=29% Similarity=0.451 Sum_probs=83.0
Q ss_pred CeeeeccCCC--CCcchHHHHHHHH-HHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYN-IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
||+|++.... .......+..|.. +++.++|+||+.+++.+. ..+..+++|||+.+++|..++...+.+
T Consensus 23 ~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~-------- 93 (325)
T cd05602 23 YAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ-TADKLYFVLDYINGGELFYHLQRERCF-------- 93 (325)
T ss_pred EEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEE-cCCeEEEEEeCCCCCcHHHHHHhcCCC--------
Confidence 5788876541 1222344455544 567789999999999998 778899999999999999988764433
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 94 ----~~~~~~~~~~qi~~~L~~lH~~g--iiHrDlkp~Nili~~ 131 (325)
T cd05602 94 ----LEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDS 131 (325)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECC
Confidence 33444789999999999999999 999999999999974
No 145
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.84 E-value=1.4e-20 Score=124.03 Aligned_cols=107 Identities=23% Similarity=0.296 Sum_probs=87.4
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|++.+. ......+.+.+|..++..++|++|+.+++++. +.+..+++|||+.+|+|.+++....
T Consensus 29 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~-~~~~~~lv~Ey~~gg~L~~~l~~~~----------- 96 (331)
T cd05624 29 YAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQ-DENYLYLVMDYYVGGDLLTLLSKFE----------- 96 (331)
T ss_pred EEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-cCCEEEEEEeCCCCCcHHHHHHHhc-----------
Confidence 578887653 12223455778899999999999999999998 7788999999999999999987532
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..+..++.|++.|+.|+|+.+ ++||||||+||+++.
T Consensus 97 ~~l~~~~~~~~~~qi~~~L~~lH~~~--iiHrDlkp~Nill~~ 137 (331)
T cd05624 97 DRLPEDMARFYIAEMVLAIHSIHQLH--YVHRDIKPDNVLLDM 137 (331)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCchHHEEEcC
Confidence 12344455889999999999999999 999999999999974
No 146
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.84 E-value=2.9e-20 Score=120.19 Aligned_cols=118 Identities=26% Similarity=0.363 Sum_probs=93.1
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh------
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA------ 74 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~------ 74 (122)
+|+|.+...........+.+|+.++++++|+|++++++++. .....++++||+++++|.+++...........
T Consensus 38 ~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 116 (288)
T cd05050 38 VAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCA-VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSS 116 (288)
T ss_pred EEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEc-CCCccEEEEecCCCCCHHHHHHHcCccccccccccccc
Confidence 47787775533334567889999999999999999999988 66778999999999999999975432111111
Q ss_pred ----hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 ----RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ----~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
......+.+..++.++.|++.|+.|+|+.+ ++|+|++|+||+++.
T Consensus 117 ~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~--i~H~dl~p~nil~~~ 165 (288)
T cd05050 117 ARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK--FVHRDLATRNCLVGE 165 (288)
T ss_pred cccccccccccCHHHHHHHHHHHHHHHHHHHhCC--eecccccHhheEecC
Confidence 011134677888999999999999999999 999999999999864
No 147
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.84 E-value=3.6e-20 Score=120.93 Aligned_cols=106 Identities=28% Similarity=0.409 Sum_probs=87.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.++..........+.+|+.+++.++|+||+.+++++. ..+..++++||+. ++|.+++...+. .
T Consensus 34 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~~-----------~ 100 (309)
T cd07872 34 VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVH-TDKSLTLVFEYLD-KDLKQYMDDCGN-----------I 100 (309)
T ss_pred EEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEe-eCCeEEEEEeCCC-CCHHHHHHhcCC-----------C
Confidence 57888876544444567789999999999999999999998 6778899999998 688887764322 2
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 101 ~~~~~~~~~~~qi~~aL~~lH~~~--ivH~dlkp~Nill~~ 139 (309)
T cd07872 101 MSMHNVKIFLYQILRGLAYCHRRK--VLHRDLKPQNLLINE 139 (309)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECC
Confidence 344556889999999999999999 999999999999974
No 148
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.84 E-value=3.6e-20 Score=117.99 Aligned_cols=105 Identities=28% Similarity=0.459 Sum_probs=86.4
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|+++... .....+.+.+|+.+++.++|+||+.+++.+. ....++++||+++++|.+++.....
T Consensus 25 ~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~----------- 91 (257)
T cd05116 25 VAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE--AESWMLVMELAELGPLNKFLQKNKH----------- 91 (257)
T ss_pred EEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc--CCCcEEEEecCCCCcHHHHHHhcCC-----------
Confidence 4788876542 2234567889999999999999999999875 4567899999999999998875433
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|+|+.+ ++|+|+||+||++++
T Consensus 92 -~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~nill~~ 130 (257)
T cd05116 92 -VTEKNITELVHQVSMGMKYLEETN--FVHRDLAARNVLLVT 130 (257)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHCC--EeecccchhhEEEcC
Confidence 344555899999999999999999 999999999999874
No 149
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.84 E-value=1.4e-20 Score=120.03 Aligned_cols=94 Identities=21% Similarity=0.254 Sum_probs=80.7
Q ss_pred chHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHH
Q psy4991 14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQV 93 (122)
Q Consensus 14 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 93 (122)
..+.+..|+.+++.++|+|++.+++.+. .....+++|||+.+|+|.+++...+. .+.+..+..++.|+
T Consensus 42 ~~~~~~~e~~~l~~~~h~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~qi 109 (258)
T cd05078 42 YSESFFEAASMMSQLSHKHLVLNYGVCV-CGDESIMVQEYVKFGSLDTYLKKNKN-----------LINISWKLEVAKQL 109 (258)
T ss_pred HHHHHHHHHHHHHhCCCCChhheeeEEE-eCCCcEEEEecCCCCcHHHHHhcCCC-----------CCCHHHHHHHHHHH
Confidence 3467788999999999999999999998 56678899999999999999875432 33445568899999
Q ss_pred HHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 94 VSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 94 ~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.|+.|||+.+ ++|+|+||+||+++.
T Consensus 110 ~~~l~~lH~~~--iiH~dlkp~nili~~ 135 (258)
T cd05078 110 AWALHFLEDKG--LTHGNVCAKNVLLIR 135 (258)
T ss_pred HHHHHHHHHCC--eecCCCccceEEEec
Confidence 99999999999 999999999999964
No 150
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.84 E-value=3.5e-20 Score=120.87 Aligned_cols=118 Identities=19% Similarity=0.281 Sum_probs=92.6
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhH----Hhhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE----REAR 75 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~----~~~~ 75 (122)
+|+|.+...........+.+|+.+++.+ +|+||+.+++.+. .....++++||+.+|+|.+++........ ....
T Consensus 53 ~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~ 131 (307)
T cd05098 53 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQ 131 (307)
T ss_pred EEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe-cCCceEEEEecCCCCcHHHHHHhcCCccccccccccc
Confidence 4677776553334456788899999999 7999999999998 66788999999999999999976432110 0001
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.....+.+..++.++.|++.|+.|||+.+ ++|+|+||+||+++.
T Consensus 132 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~H~dlkp~Nill~~ 175 (307)
T cd05098 132 VPEEQLSFKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTE 175 (307)
T ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHCC--cccccccHHheEEcC
Confidence 12235677788999999999999999999 999999999999974
No 151
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.84 E-value=4.3e-20 Score=121.78 Aligned_cols=118 Identities=19% Similarity=0.263 Sum_probs=92.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh----HHhhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA----EREAR 75 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~ 75 (122)
||+|.+.........+.+.+|+.+++++ +|+||+.+++.+. .....++++||+.+|+|.+++....... .....
T Consensus 47 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~ 125 (334)
T cd05100 47 VAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCK 125 (334)
T ss_pred EEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc-cCCceEEEEecCCCCcHHHHHHhcCCccccccccccc
Confidence 4677776543344457788999999999 8999999999998 6677899999999999999997643211 01111
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.....+.+..+..++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 126 ~~~~~l~~~~~~~~~~qi~~al~~LH~~g--ivH~dlkp~Nill~~ 169 (334)
T cd05100 126 LPEEQLTFKDLVSCAYQVARGMEYLASQK--CIHRDLAARNVLVTE 169 (334)
T ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHCC--eeccccccceEEEcC
Confidence 22345667788899999999999999999 999999999999974
No 152
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.84 E-value=4.9e-20 Score=117.91 Aligned_cols=107 Identities=21% Similarity=0.335 Sum_probs=89.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+.........+.+..|+++++.++|+|++++.+.+. ..+..+++|||+++++|..++.... ..
T Consensus 36 ~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-----------~~ 103 (268)
T cd05063 36 VAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVT-KFKPAMIITEYMENGALDKYLRDHD-----------GE 103 (268)
T ss_pred EEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEc-cCCCcEEEEEcCCCCCHHHHHHhcC-----------CC
Confidence 46777765544445677889999999999999999999998 6678899999999999999886532 13
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++|+|+||+||+++.
T Consensus 104 ~~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nili~~ 142 (268)
T cd05063 104 FSSYQLVGMLRGIAAGMKYLSDMN--YVHRDLAARNILVNS 142 (268)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEEcC
Confidence 455566899999999999999999 999999999999875
No 153
>KOG0604|consensus
Probab=99.84 E-value=3.5e-21 Score=122.59 Aligned_cols=95 Identities=28% Similarity=0.476 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHhhC-CCCCccceeeeee---eCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHH
Q psy4991 15 PRHALREYNIHKAL-DHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIV 90 (122)
Q Consensus 15 ~~~~~~e~~~l~~~-~h~~i~~~~~~~~---~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (122)
.++..+|+++--+. .|+|||+++++|. .....+.+|||.|+||.|.+.+...+. ..+.+++...++
T Consensus 98 s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~----------~afTErea~eI~ 167 (400)
T KOG0604|consen 98 SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGD----------QAFTEREASEIM 167 (400)
T ss_pred CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHccc----------ccchHHHHHHHH
Confidence 46677899977766 7999999999995 233467899999999999999987654 445666669999
Q ss_pred HHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 91 MQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 91 ~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.||+.++.|||+.+ |.|||+||+|+|.+.
T Consensus 168 ~qI~~Av~~lH~~n--IAHRDlKpENLLyt~ 196 (400)
T KOG0604|consen 168 KQIGLAVRYLHSMN--IAHRDLKPENLLYTT 196 (400)
T ss_pred HHHHHHHHHHHhcc--hhhccCChhheeeec
Confidence 99999999999999 999999999999864
No 154
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.84 E-value=2.7e-20 Score=120.54 Aligned_cols=106 Identities=32% Similarity=0.477 Sum_probs=88.8
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|.++... .....+.+.+|++++++++|+||+.+++.+. ..+..++++||+++++|.+++.....
T Consensus 29 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~---------- 97 (290)
T cd05580 29 YALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQ-DDSNLYLVMEYVPGGELFSHLRKSGR---------- 97 (290)
T ss_pred EEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEE-cCCeEEEEEecCCCCCHHHHHHHcCC----------
Confidence 4778776542 2334567889999999999999999999998 77889999999999999999876433
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 98 --l~~~~~~~~~~qil~~l~~lH~~~--i~H~dl~p~nili~~ 136 (290)
T cd05580 98 --FPEPVARFYAAQVVLALEYLHSLD--IVYRDLKPENLLLDS 136 (290)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECC
Confidence 344555899999999999999999 999999999999974
No 155
>KOG4717|consensus
Probab=99.84 E-value=1.7e-20 Score=127.00 Aligned_cols=105 Identities=30% Similarity=0.560 Sum_probs=90.4
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhc-cchhHHhhhhcC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH-KTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~ 78 (122)
||||++.+. .+.-...++..|++.++.++|||||++|.+.. ++..+|+++|.-.+|+|.+|+-.+ .++.+..+
T Consensus 46 VAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViD-TQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La---- 120 (864)
T KOG4717|consen 46 VAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVID-TQTKLYLILELGDGGDLFDYIMKHEEGLNEDLA---- 120 (864)
T ss_pred eEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhc-ccceEEEEEEecCCchHHHHHHhhhccccHHHH----
Confidence 799999876 34445677899999999999999999999998 777899999999999999998654 33444444
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
..|+.||+.++.|+|+.. ++||||||+|+.+-
T Consensus 121 --------~kYF~QI~~AI~YCHqLH--VVHRDLKPENVVFF 152 (864)
T KOG4717|consen 121 --------KKYFAQIVHAISYCHQLH--VVHRDLKPENVVFF 152 (864)
T ss_pred --------HHHHHHHHHHHHHHhhhh--hhcccCCcceeEEe
Confidence 899999999999999988 99999999999864
No 156
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.84 E-value=3.3e-20 Score=133.75 Aligned_cols=117 Identities=24% Similarity=0.362 Sum_probs=91.5
Q ss_pred CeeeeccCCCC--CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNLN--LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|.+..... +...+++.+|++++++++||||+++++.+. +.+..+++|||++|++|.+++....... .......
T Consensus 30 VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~-d~~~lyLVMEY~eGGSL~~lL~s~~~~~-~l~e~~~ 107 (932)
T PRK13184 30 VALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICS-DGDPVYYTMPYIEGYTLKSLLKSVWQKE-SLSKELA 107 (932)
T ss_pred EEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEe-eCCEEEEEEEcCCCCCHHHHHHHhhhcc-ccchhhh
Confidence 58898876532 234567899999999999999999999998 6778899999999999999887521110 0000011
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.......++.++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 108 ~~lsv~~iL~I~~QIa~AL~yLHs~G--IIHRDLKPeNILLd~ 148 (932)
T PRK13184 108 EKTSVGAFLSIFHKICATIEYVHSKG--VLHRDLKPDNILLGL 148 (932)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchheEEEcC
Confidence 33455677899999999999999999 999999999999974
No 157
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.84 E-value=4.9e-20 Score=117.05 Aligned_cols=115 Identities=26% Similarity=0.362 Sum_probs=93.0
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.++........+.+.+|+..++.++|+|++.+++++. +....++++||+.+++|.+++....... .......
T Consensus 26 ~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~---~~~~~~~ 101 (262)
T cd00192 26 VAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCT-EEEPLYLVLEYMEGGDLLDYLRKSRPVF---PSPEKST 101 (262)
T ss_pred EEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeec-CCCceEEEEEeccCCcHHHHHhhccccc---ccccccc
Confidence 47788776643334678889999999999999999999998 6788899999999999999987641100 0001234
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+++..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 102 ~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~nili~~ 140 (262)
T cd00192 102 LSLKDLLSFAIQIAKGMEYLASKK--FVHRDLAARNCLVGE 140 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCC--cccCccCcceEEECC
Confidence 566777999999999999999999 999999999999975
No 158
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.84 E-value=2e-20 Score=122.94 Aligned_cols=105 Identities=27% Similarity=0.344 Sum_probs=84.4
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHH---hhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIH---KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l---~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
||+|+++... .....+.+.+|++++ +.++||||+++++++. ..+..+++|||+.+++|...+..
T Consensus 27 ~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~-~~~~~~lv~E~~~~~~L~~~~~~---------- 95 (324)
T cd05589 27 YAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQ-TEDHVCFVMEYAAGGDLMMHIHT---------- 95 (324)
T ss_pred EEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEE-cCCEEEEEEcCCCCCcHHHHhhc----------
Confidence 5788887542 223345667777665 4567999999999998 77889999999999999877653
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..++.++.|++.|+.|||+.+ ++||||||+||++++
T Consensus 96 ---~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrdlkp~Nill~~ 136 (324)
T cd05589 96 ---DVFSEPRAVFYAACVVLGLQYLHENK--IVYRDLKLDNLLLDT 136 (324)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECC
Confidence 23455566899999999999999999 999999999999975
No 159
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.84 E-value=6.4e-20 Score=116.27 Aligned_cols=107 Identities=24% Similarity=0.336 Sum_probs=88.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+...........+.+|+++++.++|+|++.+++.+. ..+..++++||+++++|..++.... ..
T Consensus 22 ~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-----------~~ 89 (250)
T cd05085 22 VAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT-QRQPIYIVMELVPGGDFLSFLRKKK-----------DE 89 (250)
T ss_pred EEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEe-cCCccEEEEECCCCCcHHHHHHhcC-----------CC
Confidence 47777766543444567889999999999999999999998 6677889999999999998876422 12
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.++.|+|+.+ ++|+|++|+||+++.
T Consensus 90 ~~~~~~~~~~~~i~~~l~~lH~~~--~~H~dl~p~nili~~ 128 (250)
T cd05085 90 LKTKQLVKFALDAAAGMAYLESKN--CIHRDLAARNCLVGE 128 (250)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--eeecccChheEEEcC
Confidence 445666899999999999999999 999999999999975
No 160
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.84 E-value=1.8e-20 Score=123.35 Aligned_cols=106 Identities=24% Similarity=0.301 Sum_probs=83.9
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhC---CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKAL---DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~---~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
||+|++.... ..........|..++... +||+|+.+++.+. .....+++|||+.+|+|...+...+.+
T Consensus 21 ~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~------ 93 (330)
T cd05586 21 YAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQ-TDSDLYLVTDYMSGGELFWHLQKEGRF------ 93 (330)
T ss_pred EEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEe-cCCeEEEEEcCCCCChHHHHHHhcCCC------
Confidence 5788876531 122334455677776655 6999999999998 778899999999999998888754443
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..+..++.|++.|+.|||+.+ ++||||||+|||++.
T Consensus 94 ------~~~~~~~~~~qil~al~~LH~~~--ivHrDlkp~Nili~~ 131 (330)
T cd05586 94 ------SEDRAKFYIAELVLALEHLHKYD--IVYRDLKPENILLDA 131 (330)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECC
Confidence 44455899999999999999999 999999999999975
No 161
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.84 E-value=6.5e-20 Score=118.78 Aligned_cols=116 Identities=26% Similarity=0.344 Sum_probs=90.2
Q ss_pred eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh----HHhhhhc
Q psy4991 2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA----EREARCL 77 (122)
Q Consensus 2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~~~ 77 (122)
|+|.+... .....+.+.+|+.++++++|+||+.+++.+. .....+++|||+++++|.+++...+... .......
T Consensus 39 ~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 116 (291)
T cd05094 39 AVKALKDP-TLAARKDFQREAELLTNLQHEHIVKFYGVCG-DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQA 116 (291)
T ss_pred EEEecCCc-cHHHHHHHHHHHHHHhcCCCCCcceEEEEEc-cCCceEEEEecCCCCcHHHHHHhcCcccccccccccccC
Confidence 45555433 1223467889999999999999999999998 6677899999999999999997644311 0111112
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
...+.+..++.++.|++.++.|||+.+ ++|+||||+||+++.
T Consensus 117 ~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~Nil~~~ 158 (291)
T cd05094 117 KGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGA 158 (291)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEEEcc
Confidence 234677888999999999999999999 999999999999975
No 162
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.84 E-value=5.8e-20 Score=120.24 Aligned_cols=118 Identities=19% Similarity=0.278 Sum_probs=92.4
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHH----hhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER----EAR 75 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~----~~~ 75 (122)
+|+|.++..........+.+|+.+++++ +|+||+++++++. .....++++||+.+|+|.+++......... ...
T Consensus 47 ~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~ 125 (314)
T cd05099 47 VAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT-QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITK 125 (314)
T ss_pred EEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc-cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccC
Confidence 4677776553334456788999999999 6999999999997 667789999999999999999764321110 011
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.....+.+..+..++.|++.|+.|+|+.+ ++|+||||+||+++.
T Consensus 126 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~H~dlkp~Nill~~ 169 (314)
T cd05099 126 VPEEQLSFKDLVSCAYQVARGMEYLESRR--CIHRDLAARNVLVTE 169 (314)
T ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHCC--eeeccccceeEEEcC
Confidence 11234677788999999999999999999 999999999999974
No 163
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.83 E-value=4.9e-20 Score=119.70 Aligned_cols=117 Identities=20% Similarity=0.261 Sum_probs=91.0
Q ss_pred eeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHh----hhh
Q psy4991 2 CAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE----ARC 76 (122)
Q Consensus 2 avK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~----~~~ 76 (122)
|+|.++........+.+.+|+.++.++ +||||+.+++.+. ..+..++++||+++++|.+++.......... ...
T Consensus 33 ~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 111 (297)
T cd05089 33 AIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACE-NRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHG 111 (297)
T ss_pred EEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEc-cCCcceEEEEecCCCcHHHHHHhccccccccccccccC
Confidence 566665433333456788999999999 7999999999987 6677889999999999999997643221110 001
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
....+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 112 ~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nill~~ 154 (297)
T cd05089 112 TASTLTSQQLLQFASDVATGMQYLSEKQ--FIHRDLAARNVLVGE 154 (297)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCcCCcceEEECC
Confidence 1234777888999999999999999999 999999999999974
No 164
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.83 E-value=7.7e-20 Score=116.66 Aligned_cols=106 Identities=26% Similarity=0.297 Sum_probs=88.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.++.. ....+.+.+|+.++++++|+|++.+++.+. ..+..++++||+.+++|.+++.... ...
T Consensus 33 v~iK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~----------~~~ 99 (261)
T cd05068 33 VAVKTLKPG--TMDPKDFLAEAQIMKKLRHPKLIQLYAVCT-LEEPIYIVTELMKYGSLLEYLQGGA----------GRA 99 (261)
T ss_pred EEEEeeCCC--cccHHHHHHHHHHHHHCCCCCccceeEEEe-cCCCeeeeeecccCCcHHHHHhccC----------CCC
Confidence 577877654 223567889999999999999999999887 6677899999999999999887532 124
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.+||+.+ ++|+||||+||++++
T Consensus 100 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~ 138 (261)
T cd05068 100 LKLPQLIDMAAQVASGMAYLEAQN--YIHRDLAARNVLVGE 138 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCcceEEEcC
Confidence 556667999999999999999999 999999999999975
No 165
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.83 E-value=1e-19 Score=115.68 Aligned_cols=108 Identities=20% Similarity=0.340 Sum_probs=89.4
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+.........+.+.+|+.+++.++|+|++.+.+.+. +.+.+++++||+++++|.+++..... ..
T Consensus 28 ~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~----------~~ 96 (255)
T cd08219 28 YAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFE-ADGHLYIVMEYCDGGDLMQKIKLQRG----------KL 96 (255)
T ss_pred EEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEE-ECCEEEEEEeeCCCCcHHHHHHhccC----------CC
Confidence 46787765433445677888999999999999999999998 77889999999999999888864321 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+||+|+||++++
T Consensus 97 ~~~~~~~~~~~~i~~al~~lH~~~--i~H~dl~p~nili~~ 135 (255)
T cd08219 97 FPEDTILQWFVQMCLGVQHIHEKR--VLHRDIKSKNIFLTQ 135 (255)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEECC
Confidence 445566899999999999999999 999999999999975
No 166
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.83 E-value=2.5e-20 Score=122.51 Aligned_cols=106 Identities=20% Similarity=0.271 Sum_probs=85.8
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
||+|++.... .....+.+..|..++..+. |++|+.+++++. +.+.++++|||+++|+|..++...+.
T Consensus 28 vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-~~~~~~lv~Ey~~~g~L~~~i~~~~~--------- 97 (323)
T cd05615 28 YAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQ-TVDRLYFVMEYVNGGDLMYHIQQVGK--------- 97 (323)
T ss_pred EEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEe-cCCEEEEEEcCCCCCcHHHHHHHcCC---------
Confidence 5889887542 2334466778899888885 567888888887 67789999999999999988875433
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++||||||+||++++
T Consensus 98 ---l~~~~~~~i~~qi~~al~~lH~~~--ivHrDikp~Nill~~ 136 (323)
T cd05615 98 ---FKEPQAVFYAAEISVGLFFLHRRG--IIYRDLKLDNVMLDS 136 (323)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECC
Confidence 444555999999999999999999 999999999999975
No 167
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.83 E-value=3.1e-20 Score=131.91 Aligned_cols=106 Identities=26% Similarity=0.303 Sum_probs=88.4
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|+++... .....+.+..|+.++..++|+||+.+++.+. .....++||||+.+++|..++...+.+
T Consensus 32 vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-~~~~~~lVmEy~~g~~L~~li~~~~~l--------- 101 (669)
T cd05610 32 YAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQ-SANNVYLVMEYLIGGDVKSLLHIYGYF--------- 101 (669)
T ss_pred EEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEE-ECCEEEEEEeCCCCCCHHHHHHhcCCC---------
Confidence 5889887542 2233467888999999999999999999887 677899999999999999998754333
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..++.++.|++.||.|||..+ ++|+||||+|||++.
T Consensus 102 ---~~~~~~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~~ 139 (669)
T cd05610 102 ---DEEMAVKYISEVALALDYLHRHG--IIHRDLKPDNMLISN 139 (669)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHhCC--EEeCCccHHHEEEcC
Confidence 33445899999999999999998 999999999999964
No 168
>KOG0658|consensus
Probab=99.83 E-value=3.6e-21 Score=124.50 Aligned_cols=106 Identities=25% Similarity=0.320 Sum_probs=80.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCC----eEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDAN----SFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 76 (122)
||||...++..- --+|.++|+.++||||+++..+|..+.+ ...+||||++ .+|.+.++....
T Consensus 52 vAIKKv~~d~r~-----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP-~tL~~~~r~~~~-------- 117 (364)
T KOG0658|consen 52 VAIKKVLQDKRY-----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP-ETLYRVIRHYTR-------- 117 (364)
T ss_pred eEEEEecCCCCc-----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch-HHHHHHHHHHhh--------
Confidence 577776655221 2368999999999999999998852322 3557999998 899999885211
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
....++.-.+..++.|+.+|+.|||+.+ |.||||||+|+|+|.+
T Consensus 118 ~~~~mp~~~iKLYt~Qlfrgl~yLh~~~--IcHRDIKPqNlLvD~~ 161 (364)
T KOG0658|consen 118 ANQRMPLLEIKLYTYQLFRGLAYLHSHG--ICHRDIKPQNLLVDPD 161 (364)
T ss_pred cCCCCceeeeHHHHHHHHHHHHHHHhcC--cccCCCChheEEEcCC
Confidence 1123344455899999999999999999 9999999999999853
No 169
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.83 E-value=8.8e-20 Score=116.17 Aligned_cols=105 Identities=24% Similarity=0.291 Sum_probs=87.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+... ......+.+|+.+++.++|+||+++++.+. ..+..++++||+++++|.+++..... .
T Consensus 31 ~~iK~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~-----------~ 96 (256)
T cd05059 31 VAIKMIREG--AMSEDDFIEEAKVMMKLSHPNLVQLYGVCT-KQRPIFIVTEYMANGCLLNYLRERKG-----------K 96 (256)
T ss_pred EEEEEeccC--CCCHHHHHHHHHHHHhCCCCCEEEEEEEEc-CCCceEEEEecCCCCCHHHHHHhccc-----------C
Confidence 477877654 223457888999999999999999999987 66788999999999999998875321 3
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+|+||+||+++.
T Consensus 97 ~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~ni~i~~ 135 (256)
T cd05059 97 LGTEWLLDMCSDVCEAMEYLESNG--FIHRDLAARNCLVGE 135 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--cccccccHhhEEECC
Confidence 445566899999999999999999 999999999999875
No 170
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.83 E-value=9.5e-20 Score=116.18 Aligned_cols=106 Identities=24% Similarity=0.324 Sum_probs=88.0
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+... ....+.+.+|+.++++++|+|++.+++.+. ..+..++++||+++++|.+++.... ...
T Consensus 33 v~iK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~----------~~~ 99 (261)
T cd05072 33 VAVKTLKPG--TMSVQAFLEEANLMKTLQHDKLVRLYAVVT-KEEPIYIITEYMAKGSLLDFLKSDE----------GGK 99 (261)
T ss_pred EEEEEccCC--chhHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCCcEEEEecCCCCcHHHHHHHhc----------CCC
Confidence 467776644 224578899999999999999999999987 6777899999999999999886532 123
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 100 ~~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nili~~ 138 (261)
T cd05072 100 VLLPKLIDFSAQIAEGMAYIERKN--YIHRDLRAANVLVSE 138 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEecC
Confidence 455566889999999999999998 999999999999975
No 171
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.83 E-value=7.4e-20 Score=116.52 Aligned_cols=105 Identities=25% Similarity=0.342 Sum_probs=87.5
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+.........+.+.+|+.+++.+.|+|++.+++.+. .+..++++||+.+++|.+++.....
T Consensus 26 ~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~------------ 91 (257)
T cd05060 26 VAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK--GEPLMLVMELAPLGPLLKYLKKRRE------------ 91 (257)
T ss_pred EEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc--CCceEEEEEeCCCCcHHHHHHhCCC------------
Confidence 46787776643345567889999999999999999999875 4457899999999999999976433
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.++.|||..+ ++|+||||+||+++.
T Consensus 92 ~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~nili~~ 130 (257)
T cd05060 92 IPVSDLKELAHQVAMGMAYLESKH--FVHRDLAARNVLLVN 130 (257)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcC--eeccCcccceEEEcC
Confidence 345556999999999999999999 999999999999875
No 172
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.83 E-value=7.3e-20 Score=117.98 Aligned_cols=118 Identities=20% Similarity=0.361 Sum_probs=92.4
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhH----Hhhhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE----REARC 76 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~----~~~~~ 76 (122)
||+|.++........+.+.+|+.++..++|+||+.+++.+. .....++++||+.+++|..++........ .....
T Consensus 38 vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 116 (283)
T cd05091 38 VAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVT-KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKT 116 (283)
T ss_pred EEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccc
Confidence 57888876543344567889999999999999999999998 66778899999999999999864322111 00111
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
....+.+..++.++.|++.|+.|+|+.+ ++|+||||+||++++
T Consensus 117 ~~~~~~~~~~~~~~~ql~~aL~~lH~~g--i~H~dlkp~Nil~~~ 159 (283)
T cd05091 117 VKSTLEPADFVHIVTQIAAGMEFLSSHH--VVHKDLATRNVLVFD 159 (283)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHcC--ccccccchhheEecC
Confidence 1234677788999999999999999999 999999999999864
No 173
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.83 E-value=8.8e-20 Score=117.66 Aligned_cols=107 Identities=24% Similarity=0.287 Sum_probs=86.4
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeee-eCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFE-IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.+... .....+.+.+|++++++++|+|++.+.+.+. .+....++++||+++++|.+++.... .
T Consensus 36 v~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------~ 103 (284)
T cd05081 36 VAVKKLQHS-TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHR-----------E 103 (284)
T ss_pred EEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcC-----------c
Confidence 467776644 2334567889999999999999999999874 23456889999999999999986532 1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 104 ~l~~~~~~~~~~~l~~aL~~LH~~~--i~H~dlkp~nili~~ 143 (284)
T cd05081 104 RLDHRKLLLYASQICKGMEYLGSKR--YVHRDLATRNILVES 143 (284)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHhhEEECC
Confidence 2445566899999999999999999 999999999999974
No 174
>KOG4721|consensus
Probab=99.83 E-value=6.4e-21 Score=130.12 Aligned_cols=87 Identities=22% Similarity=0.427 Sum_probs=77.3
Q ss_pred HHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHH
Q psy4991 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKY 99 (122)
Q Consensus 20 ~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 99 (122)
.+|..|++++|+||+.+.|+|+ ...-+||+||||+.|.|...|+.... +.+..+..|..+|+.||.|
T Consensus 161 TdIKHLRkLkH~NII~FkGVCt-qsPcyCIiMEfCa~GqL~~VLka~~~------------itp~llv~Wsk~IA~GM~Y 227 (904)
T KOG4721|consen 161 TDIKHLRKLKHPNIITFKGVCT-QSPCYCIIMEFCAQGQLYEVLKAGRP------------ITPSLLVDWSKGIAGGMNY 227 (904)
T ss_pred hhHHHHHhccCcceeeEeeeec-CCceeEEeeeccccccHHHHHhccCc------------cCHHHHHHHHHHhhhhhHH
Confidence 4688899999999999999998 66778999999999999999997544 4444558999999999999
Q ss_pred HHcCCCCeeeeCCCCCCccccc
Q psy4991 100 LNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 100 lh~~~~~i~h~dlk~~nill~~ 121 (122)
||... |+|||||.-|||++.
T Consensus 228 LH~hK--IIHRDLKSPNiLIs~ 247 (904)
T KOG4721|consen 228 LHLHK--IIHRDLKSPNILISY 247 (904)
T ss_pred HHHhh--HhhhccCCCceEeec
Confidence 99999 999999999999974
No 175
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.83 E-value=3.4e-20 Score=122.25 Aligned_cols=107 Identities=22% Similarity=0.303 Sum_probs=87.0
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|++.+. ......+.+.+|+.++..++|++|+.+++++. +....+++|||+.+|+|.+++....
T Consensus 29 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~ey~~~g~L~~~l~~~~----------- 96 (332)
T cd05623 29 FAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQ-DENNLYLVMDYYVGGDLLTLLSKFE----------- 96 (332)
T ss_pred EEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe-cCCEEEEEEeccCCCcHHHHHHHhc-----------
Confidence 477777543 12223455778999999999999999999998 7788999999999999999987532
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 97 ~~l~~~~~~~~~~qi~~al~~lH~~~--iiHrDlkp~Nili~~ 137 (332)
T cd05623 97 DRLPEDMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDM 137 (332)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECC
Confidence 12444555889999999999999999 999999999999974
No 176
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.83 E-value=4.3e-20 Score=121.33 Aligned_cols=106 Identities=19% Similarity=0.255 Sum_probs=85.8
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
||+|++.+.. .....+....|..++... .|++|+.+++++. +.+..+++|||+++|+|...+...+.
T Consensus 28 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-~~~~~~lv~E~~~~g~L~~~~~~~~~--------- 97 (323)
T cd05616 28 YAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQ-TMDRLYFVMEYVNGGDLMYQIQQVGR--------- 97 (323)
T ss_pred EEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEe-cCCEEEEEEcCCCCCCHHHHHHHcCC---------
Confidence 5788887642 223345567788888877 6889999999887 67889999999999999988875443
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++||||||+|||+++
T Consensus 98 ---~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~ 136 (323)
T cd05616 98 ---FKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDS 136 (323)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHCC--EEecCCCHHHeEECC
Confidence 344455899999999999999999 999999999999975
No 177
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.83 E-value=8.6e-20 Score=116.37 Aligned_cols=108 Identities=23% Similarity=0.256 Sum_probs=86.1
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+.........+.+.+|+.+++.++|||++.+++.+....+..++++||+.+++|.+++..... .
T Consensus 26 ~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-----------~ 94 (262)
T cd05058 26 CAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETH-----------N 94 (262)
T ss_pred EEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCC-----------C
Confidence 46777654433334577889999999999999999999876455667899999999999999875321 1
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+..+..++.|++.|+.|||+.+ ++|+||||+||++++
T Consensus 95 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlk~~nili~~ 133 (262)
T cd05058 95 PTVKDLIGFGLQVAKGMEYLASKK--FVHRDLAARNCMLDE 133 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcC
Confidence 233445788999999999999998 999999999999975
No 178
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.83 E-value=8.8e-20 Score=116.67 Aligned_cols=105 Identities=16% Similarity=0.206 Sum_probs=86.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|++.... ......+.+|+.++++++|+|++.+++.+. .....++++||+++++|.+++...+.
T Consensus 37 ~aik~~~~~~-~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~-~~~~~~iv~e~~~~~~L~~~~~~~~~------------ 102 (267)
T cd06646 37 AAVKIIKLEP-GDDFSLIQQEIFMVKECKHCNIVAYFGSYL-SREKLWICMEYCGGGSLQDIYHVTGP------------ 102 (267)
T ss_pred EEEEEEecCc-cchHHHHHHHHHHHHhcCCCCeeeeeEEEE-eCCEEEEEEeCCCCCcHHHHHHhcCC------------
Confidence 4678776442 223456778999999999999999999998 67788999999999999988865433
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 103 ~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nill~~ 141 (267)
T cd06646 103 LSELQIAYVCRETLQGLAYLHSKG--KMHRDIKGANILLTD 141 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECC
Confidence 344455899999999999999999 999999999999974
No 179
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.83 E-value=5e-20 Score=120.05 Aligned_cols=106 Identities=27% Similarity=0.388 Sum_probs=87.9
Q ss_pred CeeeeccCCCC--CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNLN--LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|.+..... ....+.+.+|+++++.++|+||+.+++.+. ..+..++++||+++++|..++...+.
T Consensus 29 v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~---------- 97 (305)
T cd05609 29 FAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE-TKRHLCMVMEYVEGGDCATLLKNIGA---------- 97 (305)
T ss_pred EEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe-cCCEEEEEEecCCCCcHHHHHHHcCC----------
Confidence 47777765521 223467788999999999999999999998 67788999999999999999876443
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+++..+..++.|++.|+.|+|+.+ ++|+|++|+||+++.
T Consensus 98 --~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~NIll~~ 136 (305)
T cd05609 98 --LPVDMARMYFAETVLALEYLHNYG--IVHRDLKPDNLLITS 136 (305)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchHHEEECC
Confidence 344455888999999999999999 999999999999975
No 180
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.83 E-value=1e-19 Score=118.38 Aligned_cols=106 Identities=29% Similarity=0.426 Sum_probs=87.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+...........+.+|+.+++.++|+||+.+++++. ..+..++++||+. ++|.+++.... ..
T Consensus 34 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~-----------~~ 100 (301)
T cd07873 34 VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-TEKSLTLVFEYLD-KDLKQYLDDCG-----------NS 100 (301)
T ss_pred EEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEe-cCCeEEEEEeccc-cCHHHHHHhcC-----------CC
Confidence 57888765544444567789999999999999999999998 7788999999997 68888876432 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 101 ~~~~~~~~~~~qi~~aL~~lH~~~--i~H~dlkp~Nil~~~ 139 (301)
T cd07873 101 INMHNVKLFLFQLLRGLNYCHRRK--VLHRDLKPQNLLINE 139 (301)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHHHEEECC
Confidence 445566899999999999999999 999999999999975
No 181
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.83 E-value=1.4e-19 Score=116.53 Aligned_cols=106 Identities=22% Similarity=0.280 Sum_probs=87.6
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+...........+.+|+.+++.++|+|++++++.+. + ...++++||+.+|+|.+++..... .
T Consensus 39 ~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~-~~~~~v~e~~~~g~L~~~l~~~~~-----------~ 105 (279)
T cd05057 39 VAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICL-S-SQVQLITQLMPLGCLLDYVRNHKD-----------N 105 (279)
T ss_pred EEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-c-CceEEEEecCCCCcHHHHHHhccC-----------C
Confidence 36676665544344567889999999999999999999997 4 678899999999999998875321 3
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 106 ~~~~~~~~~~~qi~~~l~~LH~~~--i~H~di~p~nil~~~ 144 (279)
T cd05057 106 IGSQYLLNWCVQIAKGMSYLEEKR--LVHRDLAARNVLVKT 144 (279)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--EEecccCcceEEEcC
Confidence 455666999999999999999998 999999999999964
No 182
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.83 E-value=1.1e-19 Score=120.21 Aligned_cols=119 Identities=22% Similarity=0.308 Sum_probs=92.1
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh---------
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA--------- 70 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------- 70 (122)
||+|.++........+.+..|+.+++++ +|+||+.+++++......+++++||+.+++|.+++.......
T Consensus 40 va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~ 119 (337)
T cd05054 40 VAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTR 119 (337)
T ss_pred eeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhcccccccccccccc
Confidence 5788777543333446678899999999 899999999998756677889999999999999986532100
Q ss_pred ----------------------------------------HHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeee
Q psy4991 71 ----------------------------------------EREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHY 110 (122)
Q Consensus 71 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~ 110 (122)
.........++.+..+..++.|++.|+.|||+.+ ++||
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--ivHr 197 (337)
T cd05054 120 KREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRK--CIHR 197 (337)
T ss_pred ccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC--eecC
Confidence 0000011235778889999999999999999999 9999
Q ss_pred CCCCCCccccc
Q psy4991 111 DLKPGKPLFLF 121 (122)
Q Consensus 111 dlk~~nill~~ 121 (122)
||||+||+++.
T Consensus 198 Dikp~Nill~~ 208 (337)
T cd05054 198 DLAARNILLSE 208 (337)
T ss_pred CCCcceEEEeC
Confidence 99999999974
No 183
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.83 E-value=1.1e-19 Score=115.36 Aligned_cols=108 Identities=22% Similarity=0.360 Sum_probs=89.7
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.+... ......+.+.+|+++++.++|+|++.+++.+. ..+..++++||+++++|..++.... ..
T Consensus 28 ~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~----------~~ 96 (256)
T cd08529 28 YAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFL-DKGKLNIVMEYAENGDLHKLLKMQR----------GR 96 (256)
T ss_pred EEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeec-cCCEEEEEEEeCCCCcHHHHHHHhc----------CC
Confidence 466766543 23445677889999999999999999999998 6778999999999999999887531 12
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.++.|||+.+ ++|+|++|+||+++.
T Consensus 97 ~~~~~~~~~i~~~l~~al~~lH~~~--i~h~dl~~~nili~~ 136 (256)
T cd08529 97 PLPEDQVWRFFIQILLGLAHLHSKK--ILHRDIKSLNLFLDA 136 (256)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEeC
Confidence 4556667899999999999999999 999999999999875
No 184
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.83 E-value=1.2e-19 Score=116.92 Aligned_cols=116 Identities=22% Similarity=0.314 Sum_probs=91.2
Q ss_pred eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhH---HhhhhcC
Q psy4991 2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE---REARCLS 78 (122)
Q Consensus 2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~---~~~~~~~ 78 (122)
|+|.+... .....+.+.+|+++++.++|+||+.+++.+. .....++++||+++++|.+++........ .......
T Consensus 39 ~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 116 (280)
T cd05092 39 AVKALKEA-SESARQDFQREAELLTVLQHQHIVRFYGVCT-EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAP 116 (280)
T ss_pred EEEecCcC-CHHHHHHHHHHHHHHhcCCCCCCceEEEEEe-cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCc
Confidence 45555533 2334567889999999999999999999988 67778999999999999999976543111 1111112
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..++.++.|++.|+.|||+.+ ++|+||||+||++++
T Consensus 117 ~~l~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~nil~~~ 157 (280)
T cd05092 117 GQLTLGQMLAIASQIASGMVYLASLH--FVHRDLATRNCLVGQ 157 (280)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHCC--eecccccHhhEEEcC
Confidence 34677888999999999999999999 999999999999974
No 185
>KOG0694|consensus
Probab=99.83 E-value=1.2e-20 Score=130.10 Aligned_cols=105 Identities=28% Similarity=0.362 Sum_probs=89.7
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
+|||+++++ ...+..+..+.|.+++... +||.+++++.+|+ +.+.+++||||+.||++..... .+.+++.
T Consensus 396 yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQ-T~~~l~fvmey~~Ggdm~~~~~-~~~F~e~----- 468 (694)
T KOG0694|consen 396 YAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQ-TKEHLFFVMEYVAGGDLMHHIH-TDVFSEP----- 468 (694)
T ss_pred EEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccc-cCCeEEEEEEecCCCcEEEEEe-cccccHH-----
Confidence 599999998 3566789999999999888 6999999999999 8899999999999999544332 2334444
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
....|+.+++.|+.|||+++ |++||||.+|||||.
T Consensus 469 -------rarfyaAev~l~L~fLH~~~--IIYRDlKLdNiLLD~ 503 (694)
T KOG0694|consen 469 -------RARFYAAEVVLGLQFLHENG--IIYRDLKLDNLLLDT 503 (694)
T ss_pred -------HHHHHHHHHHHHHHHHHhcC--ceeeecchhheEEcc
Confidence 44899999999999999999 999999999999985
No 186
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.83 E-value=5.7e-20 Score=123.69 Aligned_cols=90 Identities=26% Similarity=0.415 Sum_probs=77.5
Q ss_pred HHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHH
Q psy4991 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVS 95 (122)
Q Consensus 16 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 95 (122)
+.+.+|+++++.++||||+++++++. .....++++|++. ++|..++..... +++..++.++.|++.
T Consensus 128 ~~~~~E~~il~~l~HpnIv~~~~~~~-~~~~~~lv~e~~~-~~L~~~l~~~~~------------l~~~~~~~i~~qi~~ 193 (391)
T PHA03212 128 GGTATEAHILRAINHPSIIQLKGTFT-YNKFTCLILPRYK-TDLYCYLAAKRN------------IAICDILAIERSVLR 193 (391)
T ss_pred hhhHHHHHHHHhCCCCCCCCEeEEEE-ECCeeEEEEecCC-CCHHHHHHhcCC------------CCHHHHHHHHHHHHH
Confidence 45788999999999999999999998 6678889999996 788887765433 344555899999999
Q ss_pred HHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 96 ALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 96 ~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
|+.|||+.+ ++||||||+||+++.
T Consensus 194 aL~ylH~~~--IvHrDiKP~NIll~~ 217 (391)
T PHA03212 194 AIQYLHENR--IIHRDIKAENIFINH 217 (391)
T ss_pred HHHHHHhCC--cccCCCChHhEEEcC
Confidence 999999999 999999999999974
No 187
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.83 E-value=1e-19 Score=115.78 Aligned_cols=107 Identities=22% Similarity=0.309 Sum_probs=90.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+.........+.+.+|+.++++++|+||+.+++.+. . ...++++||+++++|.+.+..... ..
T Consensus 26 vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~-~~~~~v~e~~~~~~L~~~l~~~~~----------~~ 93 (257)
T cd05040 26 VAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVL-T-HPLMMVTELAPLGSLLDRLRKDAL----------GH 93 (257)
T ss_pred EEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEc-C-CeEEEEEEecCCCcHHHHHHhccc----------cc
Confidence 47787776643345678889999999999999999999998 4 788899999999999998876421 24
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 94 ~~~~~~~~~~~qi~~~L~~lH~~~--i~H~di~p~nil~~~ 132 (257)
T cd05040 94 FLISTLCDYAVQIANGMRYLESKR--FIHRDLAARNILLAS 132 (257)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhCC--ccccccCcccEEEec
Confidence 556667999999999999999999 999999999999975
No 188
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.83 E-value=1e-19 Score=115.80 Aligned_cols=106 Identities=24% Similarity=0.323 Sum_probs=90.0
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+..... ..+++.+|+.+++.++|+|++.+++.+. +....++++||+.+++|.+++..... ..
T Consensus 32 v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~----------~~ 98 (256)
T cd05039 32 VAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVL-QGNPLYIVTEYMAKGSLVDYLRSRGR----------AV 98 (256)
T ss_pred EEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEc-CCCCeEEEEEecCCCcHHHHHHhcCC----------CC
Confidence 57888776532 4577899999999999999999999998 57788999999999999999875321 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.++.|||+.+ ++|+||+|+||+++.
T Consensus 99 ~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~Nili~~ 137 (256)
T cd05039 99 ITLAQQLGFALDVCEGMEYLEEKN--FVHRDLAARNVLVSE 137 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--ccchhcccceEEEeC
Confidence 556677999999999999999999 999999999999974
No 189
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.83 E-value=5e-20 Score=117.86 Aligned_cols=113 Identities=22% Similarity=0.274 Sum_probs=90.0
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+...........+.+|+.+++.++|+||+.+++.+. .....++++||+++++|.+++....... .....
T Consensus 29 ~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~l~~~~~~~-----~~~~~ 102 (269)
T cd05044 29 VAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCL-LNEPQYIIMELMEGGDLLSYLRDARVER-----FGPPL 102 (269)
T ss_pred ehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeec-CCCCeEEEEeccCCCcHHHHHHHhhhcc-----cCCcc
Confidence 35666655433345667889999999999999999999987 6677899999999999999987532110 01223
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 103 ~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~ 141 (269)
T cd05044 103 LTLKELLDICLDVAKGCVYLEQMH--FIHRDLAARNCLVSE 141 (269)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCC--cccCCCChheEEEec
Confidence 566777899999999999999999 999999999999874
No 190
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.83 E-value=1e-19 Score=116.40 Aligned_cols=105 Identities=15% Similarity=0.208 Sum_probs=87.6
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.++... ......+.+|+.+++.++|+|++.+++.+. ..+..++++||+++++|.+++...+.
T Consensus 37 ~~ik~~~~~~-~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~------------ 102 (267)
T cd06645 37 AAIKVIKLEP-GEDFAVVQQEIIMMKDCKHSNIVAYFGSYL-RRDKLWICMEFCGGGSLQDIYHVTGP------------ 102 (267)
T ss_pred EEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCeeeEEEEEE-eCCEEEEEEeccCCCcHHHHHHhcCC------------
Confidence 4777776542 223456778999999999999999999998 67888999999999999998876443
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+.+++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 103 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~ 141 (267)
T cd06645 103 LSESQIAYVSRETLQGLYYLHSKG--KMHRDIKGANILLTD 141 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECC
Confidence 344555999999999999999999 999999999999874
No 191
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.83 E-value=1.2e-19 Score=116.21 Aligned_cols=106 Identities=25% Similarity=0.314 Sum_probs=87.4
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|...........+.+.+|+.++++++|+|++.+++.+. + ...++++||+++++|.+++.... ..
T Consensus 37 v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~-~~~~lv~e~~~~~~L~~~l~~~~-----------~~ 103 (270)
T cd05056 37 VAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVIT-E-NPVWIVMELAPLGELRSYLQVNK-----------YS 103 (270)
T ss_pred eEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEc-C-CCcEEEEEcCCCCcHHHHHHhCC-----------CC
Confidence 46776665543445678899999999999999999999886 3 44679999999999999987532 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.+++.|+.|+|+.+ ++|+||||+||+++.
T Consensus 104 ~~~~~~~~~~~~l~~~l~~lH~~~--~~H~dl~p~nili~~ 142 (270)
T cd05056 104 LDLASLILYSYQLSTALAYLESKR--FVHRDIAARNVLVSS 142 (270)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--eeccccChheEEEec
Confidence 455666899999999999999999 999999999999875
No 192
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.82 E-value=1.5e-19 Score=115.27 Aligned_cols=107 Identities=22% Similarity=0.262 Sum_probs=89.0
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+.... ....+.+.+|+.+++.++|+|++.+++.+. +....++++||+++++|.+++..... ..
T Consensus 33 ~~~k~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~----------~~ 100 (261)
T cd05148 33 VAIKILKSDD-LLKQQDFQKEVQALKRLRHKHLISLFAVCS-VGEPVYIITELMEKGSLLAFLRSPEG----------QV 100 (261)
T ss_pred EEEEeccccc-hhhHHHHHHHHHHHhcCCCcchhheeeeEe-cCCCeEEEEeecccCCHHHHHhcCCC----------CC
Confidence 4677776552 224567889999999999999999999988 67788999999999999999875321 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 101 ~~~~~~~~~~~~i~~al~~lH~~~--i~h~dl~~~nilv~~ 139 (261)
T cd05148 101 LPVASLIDMACQVAEGMAYLEEQN--SIHRDLAARNILVGE 139 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--eeccccCcceEEEcC
Confidence 455666899999999999999999 999999999999974
No 193
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.82 E-value=1.6e-19 Score=114.76 Aligned_cols=108 Identities=26% Similarity=0.369 Sum_probs=89.1
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+++|.+... .+......+.+|+.++++++|+||+.+++++. +.+..++++||+++++|.+++.... ..
T Consensus 28 ~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~~~~e~~~~~~L~~~~~~~~----------~~ 96 (256)
T cd08221 28 VVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFM-DDNTLLIEMEYANGGTLYDKIVRQK----------GQ 96 (256)
T ss_pred EEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEe-cCCeEEEEEEecCCCcHHHHHHhcc----------cc
Confidence 356766543 23445567889999999999999999999998 6788899999999999999887531 12
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+.++..++.|++.++.|||+.+ ++|+|++|+||+++.
T Consensus 97 ~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~ni~~~~ 136 (256)
T cd08221 97 LFEEEMVLWYLFQIVSAVSYIHKAG--ILHRDIKTLNIFLTK 136 (256)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChHhEEEeC
Confidence 3455666899999999999999999 999999999999874
No 194
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.82 E-value=7.7e-20 Score=116.86 Aligned_cols=106 Identities=21% Similarity=0.315 Sum_probs=88.0
Q ss_pred CeeeeccCCCC-----CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNLN-----LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~~-----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
||+|.+..... ....+.+.+|+.++++++|+|++++++.+. +.+..++++||+.+++|.+++...+.
T Consensus 28 ~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~~v~e~~~~~~L~~~l~~~~~------- 99 (268)
T cd06630 28 MAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC-EDSHFNLFVEWMAGGSVSHLLSKYGA------- 99 (268)
T ss_pred EEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceec-cCCeEEEEEeccCCCcHHHHHHHhCC-------
Confidence 47787764421 113467889999999999999999999998 77788999999999999998875433
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 100 -----~~~~~~~~~~~ql~~al~~LH~~~--i~H~~i~~~nil~~~ 138 (268)
T cd06630 100 -----FKEAVIINYTEQLLRGLSYLHENQ--IIHRDVKGANLLIDS 138 (268)
T ss_pred -----CCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcC
Confidence 345556899999999999999999 999999999999863
No 195
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.82 E-value=9.9e-20 Score=116.09 Aligned_cols=106 Identities=22% Similarity=0.311 Sum_probs=87.2
Q ss_pred CeeeeccCCCC----CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991 1 MCAKLLTTNLN----LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76 (122)
Q Consensus 1 vavK~~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 76 (122)
+|+|.+..... ....+.+.+|+.++++++|+||+.+++.+. .....++++||+++++|.+.+.....+
T Consensus 30 ~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~l~~~~~~~~~~------- 101 (263)
T cd06625 30 LAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLR-DDETLSIFMEYMPGGSVKDQLKAYGAL------- 101 (263)
T ss_pred EEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEc-cCCeEEEEEEECCCCcHHHHHHHhCCC-------
Confidence 46777764421 112356788999999999999999999998 667899999999999999988764433
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.....++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 102 -----~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nilv~~ 139 (263)
T cd06625 102 -----TETVTRKYTRQILEGVEYLHSNM--IVHRDIKGANILRDS 139 (263)
T ss_pred -----CHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcC
Confidence 34445889999999999999999 999999999999975
No 196
>KOG1151|consensus
Probab=99.82 E-value=6.5e-20 Score=122.53 Aligned_cols=109 Identities=65% Similarity=1.140 Sum_probs=95.6
Q ss_pred CeeeeccCC--C----CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTN--L----NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~--~----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||||+..-+ | ++......++|.++-+.++||.||++|++|.-+...+|-|+|||+|.+|..+++.++...+..+
T Consensus 491 vAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEA 570 (775)
T KOG1151|consen 491 VAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEA 570 (775)
T ss_pred eeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHH
Confidence 688887643 2 1224577889999999999999999999998788899999999999999999999877777777
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..++.||+.++.||....+||+|.||||.|||+..
T Consensus 571 ------------RSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~ 605 (775)
T KOG1151|consen 571 ------------RSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVN 605 (775)
T ss_pred ------------HHHHHHHHHHHHHHhccCCCeeeeccCCccEEEec
Confidence 89999999999999998899999999999999863
No 197
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.82 E-value=1.4e-19 Score=115.75 Aligned_cols=110 Identities=25% Similarity=0.385 Sum_probs=88.9
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|.++.. ........+.+|+.+++.++|||++++++.+. ..+..++++||+.+++|..++..... ..
T Consensus 30 ~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~--------~~ 100 (267)
T cd08228 30 VALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFI-EDNELNIVLELADAGDLSQMIKYFKK--------QK 100 (267)
T ss_pred EEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEE-ECCeEEEEEEecCCCcHHHHHHHhhh--------cc
Confidence 477876643 22334567889999999999999999999988 66788899999999999988864211 11
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+++..++.++.|++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 101 ~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~nil~~~ 141 (267)
T cd08228 101 RLIPERTVWKYFVQLCSAVEHMHSRR--VMHRDIKPANVFITA 141 (267)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCCHHHEEEcC
Confidence 23556677899999999999999999 999999999999975
No 198
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.82 E-value=2.1e-19 Score=114.49 Aligned_cols=106 Identities=21% Similarity=0.334 Sum_probs=88.4
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+..... ...+.+.+|+.++++++|+|++.+++.+. +....++++||+.+++|..++.... ..
T Consensus 31 ~~ik~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~l~~e~~~~~~l~~~~~~~~-----------~~ 97 (262)
T cd06613 31 VAIKVIKLEPG-DDFEIIQQEISMLKECRHPNIVAYFGSYL-RRDKLWIVMEYCGGGSLQDIYQVTR-----------GP 97 (262)
T ss_pred EEEEEEEcCch-hhHHHHHHHHHHHHhCCCCChhceEEEEE-eCCEEEEEEeCCCCCcHHHHHHhhc-----------cC
Confidence 36677665422 24577889999999999999999999988 6778999999999999998887531 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 98 l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~ 136 (262)
T cd06613 98 LSELQIAYVCRETLKGLAYLHETG--KIHRDIKGANILLTE 136 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--ceecCCChhhEEECC
Confidence 445566999999999999999999 999999999999975
No 199
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.82 E-value=1.9e-19 Score=114.23 Aligned_cols=108 Identities=29% Similarity=0.427 Sum_probs=90.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+.........+.+..|+.+++.++|+|++.+++.+. +.+..++++||+++++|.+++..... ..
T Consensus 31 vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~i~e~~~~~~l~~~~~~~~~----------~~ 99 (258)
T smart00219 31 VAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCT-EEEPLMIVMEYMEGGDLLDYLRKNRP----------KE 99 (258)
T ss_pred EEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEc-CCCeeEEEEeccCCCCHHHHHHhhhh----------cc
Confidence 57888876643335678889999999999999999999998 66788999999999999998875332 11
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.++.+||+.+ ++|+|++|+||+++.
T Consensus 100 ~~~~~~~~~~~ql~~~l~~lh~~~--~~h~dl~~~nil~~~ 138 (258)
T smart00219 100 LSLSDLLSFALQIARGMEYLESKN--FIHRDLAARNCLVGE 138 (258)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC--eeecccccceEEEcc
Confidence 556666999999999999999999 999999999999975
No 200
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.82 E-value=1.6e-19 Score=116.23 Aligned_cols=115 Identities=17% Similarity=0.197 Sum_probs=92.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+.........+.+.+|+.+++.++|+|++++++++.......+++++|+.+++|..++........ .....
T Consensus 38 v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~----~~~~~ 113 (280)
T cd05043 38 VFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEA----NNPQA 113 (280)
T ss_pred EEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhcccccc----ccccC
Confidence 46777775544445677889999999999999999999887456778899999999999999876422110 01245
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 114 l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~p~nil~~~ 152 (280)
T cd05043 114 LSTQQLVHMAIQIACGMSYLHKRG--VIHKDIAARNCVIDE 152 (280)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--EeecccCHhhEEEcC
Confidence 677788999999999999999999 999999999999965
No 201
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.82 E-value=1.6e-19 Score=116.86 Aligned_cols=108 Identities=23% Similarity=0.271 Sum_probs=87.6
Q ss_pred CeeeeccCCCC--CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNLN--LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|.+..... ......+.+|+.++++++|++++.+++.+. +.+..++++||+.+++|..++...+.
T Consensus 28 ~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~---------- 96 (285)
T cd05630 28 YACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYE-TKDALCLVLTLMNGGDLKFHIYHMGE---------- 96 (285)
T ss_pred EEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEe-cCCEEEEEEEecCCCcHHHHHHHhcc----------
Confidence 57787765421 122345678999999999999999999998 66789999999999999888864321
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..+..++.|++.|+.|||+.+ ++|+|+||+||++++
T Consensus 97 ~~l~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nil~~~ 137 (285)
T cd05630 97 AGFEEGRAVFYAAEICCGLEDLHQER--IVYRDLKPENILLDD 137 (285)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECC
Confidence 23555666899999999999999999 999999999999874
No 202
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.82 E-value=1.4e-19 Score=116.60 Aligned_cols=106 Identities=27% Similarity=0.415 Sum_probs=86.3
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.+.... .....+.+.+|+.++++++|+|++.+++.+. .....++++||++++.+..+.....
T Consensus 29 ~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~l~~~~~~~~------------ 95 (286)
T cd07847 29 VAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFR-RKRKLHLVFEYCDHTVLNELEKNPR------------ 95 (286)
T ss_pred EEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEe-eCCEEEEEEeccCccHHHHHHhCCC------------
Confidence 4778776542 2233456789999999999999999999998 6778899999999877776654322
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..+..++.|++.++.|||+.+ ++|+||+|+||+++.
T Consensus 96 ~~~~~~~~~~~~ql~~~l~~LH~~~--i~H~dl~p~nil~~~ 135 (286)
T cd07847 96 GVPEHLIKKIIWQTLQAVNFCHKHN--CIHRDVKPENILITK 135 (286)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCChhhEEEcC
Confidence 3455666999999999999999999 999999999999974
No 203
>KOG0667|consensus
Probab=99.82 E-value=4.9e-20 Score=126.23 Aligned_cols=105 Identities=30% Similarity=0.445 Sum_probs=90.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCC-CC-----CccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALD-HP-----RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~-----~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||||+++.. .........|+.+|..++ |. |+|+++++|. -.+.+|||+|.+. .+|.++++.+..
T Consensus 214 VAIKIiKN~--k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~-fr~HlciVfELL~-~NLYellK~n~f------ 283 (586)
T KOG0667|consen 214 VAIKIIKNK--KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFY-FRNHLCIVFELLS-TNLYELLKNNKF------ 283 (586)
T ss_pred EEEEeeccC--hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccc-cccceeeeehhhh-hhHHHHHHhcCC------
Confidence 799999977 456677788999999995 43 8999999998 7899999999997 899999997643
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..++...+..++.|++.+|.+||+.+ |+|+|||||||||..
T Consensus 284 ----~Glsl~~ir~~~~Qil~~L~~L~~l~--IIHcDLKPENILL~~ 324 (586)
T KOG0667|consen 284 ----RGLSLPLVRKFAQQILTALLFLHELG--IIHCDLKPENILLKD 324 (586)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCChhheeecc
Confidence 34566677999999999999999999 999999999999863
No 204
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.82 E-value=7.7e-20 Score=122.18 Aligned_cols=105 Identities=24% Similarity=0.391 Sum_probs=85.0
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCC-----eEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDAN-----SFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||+|.+.... .......+.+|+.+++.++|+||+.+++++. ... ..++++||+. ++|...+....
T Consensus 28 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~------- 98 (372)
T cd07853 28 VALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQ-PPHIDPFEEIYVVTELMQ-SDLHKIIVSPQ------- 98 (372)
T ss_pred EEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheec-CCCccccceEEEEeeccc-cCHHHHHhcCC-------
Confidence 5788876542 2234467889999999999999999999987 333 6889999997 68877775433
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 99 -----~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nili~~ 138 (372)
T cd07853 99 -----PLSSDHVKVFLYQILRGLKYLHSAG--ILHRDIKPGNLLVNS 138 (372)
T ss_pred -----CCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChHHEEECC
Confidence 3445556899999999999999999 999999999999975
No 205
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.82 E-value=4e-19 Score=113.08 Aligned_cols=106 Identities=21% Similarity=0.276 Sum_probs=86.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|..+.. ...+.+.+|+.++++++|+|++.+++.+.......++++||+++++|.+++..... ..
T Consensus 32 ~~~k~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~----------~~ 98 (256)
T cd05082 32 VAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR----------SV 98 (256)
T ss_pred EEEEEeCCC---chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCC----------CC
Confidence 466766533 23467889999999999999999999876466678899999999999998875322 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+||||+||++++
T Consensus 99 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~ 137 (256)
T cd05082 99 LGGDCLLKFSLDVCEAMEYLEANN--FVHRDLAARNVLVSE 137 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--EeccccchheEEEcC
Confidence 455666899999999999999999 999999999999975
No 206
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.82 E-value=2.8e-19 Score=114.12 Aligned_cols=110 Identities=25% Similarity=0.394 Sum_probs=90.2
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|.++.. ......+.+.+|+.++++++|++++.+++.+. ..+..++++||+++++|..++..... ..
T Consensus 30 ~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~--------~~ 100 (267)
T cd08224 30 VALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI-ENNELNIVLELADAGDLSRMIKHFKK--------QK 100 (267)
T ss_pred EEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee-cCCeEEEEEecCCCCCHHHHHHHhcc--------cC
Confidence 477877643 22334677889999999999999999999998 66788999999999999998865311 12
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..++.++.+++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 101 ~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~nil~~~ 141 (267)
T cd08224 101 RLIPERTIWKYFVQLCSALEHMHSKR--IMHRDIKPANVFITA 141 (267)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHhCC--EecCCcChhhEEECC
Confidence 34566777999999999999999999 999999999999974
No 207
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.82 E-value=1.5e-19 Score=116.33 Aligned_cols=106 Identities=28% Similarity=0.469 Sum_probs=88.4
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|..... .....+.+.+|+.++++++|+|++++++.+. .....++++||+.+++|..++...+ ..
T Consensus 33 ~~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-----------~~ 99 (280)
T cd06611 33 AAAKIIQIE-SEEELEDFMVEIDILSECKHPNIVGLYEAYF-YENKLWILIEFCDGGALDSIMLELE-----------RG 99 (280)
T ss_pred EEEEEEeeC-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEe-cCCeEEEEeeccCCCcHHHHHHHhc-----------CC
Confidence 467776544 2234567889999999999999999999998 6778899999999999999886532 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 100 l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~nili~~ 138 (280)
T cd06611 100 LTEPQIRYVCRQMLEALNFLHSHK--VIHRDLKAGNILLTL 138 (280)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEECC
Confidence 455666999999999999999999 999999999999874
No 208
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.82 E-value=1.9e-19 Score=115.89 Aligned_cols=106 Identities=20% Similarity=0.253 Sum_probs=87.5
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.++........+.+.+|+.+++.+.|+|++.+++.+. . ...++++||+++|+|.+++.... ..
T Consensus 39 va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~-~~~~l~~~~~~~g~l~~~l~~~~-----------~~ 105 (279)
T cd05109 39 VAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICL-T-STVQLVTQLMPYGCLLDYVRENK-----------DR 105 (279)
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEc-C-CCcEEEEEcCCCCCHHHHHhhcc-----------CC
Confidence 47888876644445677889999999999999999999886 3 34668999999999998887532 13
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 106 ~~~~~~~~~~~qi~~~L~~lH~~~--iiH~dlkp~Nil~~~ 144 (279)
T cd05109 106 IGSQDLLNWCVQIAKGMSYLEEVR--LVHRDLAARNVLVKS 144 (279)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--eeccccccceEEEcC
Confidence 455566899999999999999999 999999999999964
No 209
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.82 E-value=3e-19 Score=113.83 Aligned_cols=106 Identities=25% Similarity=0.315 Sum_probs=88.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+... ....+++.+|+.+++.++|+|++.+++.+. .....++++||+.+++|.+++..... ..
T Consensus 33 ~~vK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~i~~~~~----------~~ 99 (261)
T cd05034 33 VAVKTLKPG--TMSPEAFLQEAQIMKKLRHDKLVQLYAVCS-EEEPIYIVTEYMSKGSLLDFLKSGEG----------KK 99 (261)
T ss_pred EEEEEecCC--ccCHHHHHHHHHHHhhCCCCCEeeeeeeee-cCCceEEEEeccCCCCHHHHHhcccc----------CC
Confidence 477877754 234577899999999999999999999987 66778999999999999999875321 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++|+|++|+||++++
T Consensus 100 ~~~~~~~~~~~~i~~al~~lh~~~--i~h~di~p~nili~~ 138 (261)
T cd05034 100 LRLPQLVDMAAQIAEGMAYLESRN--YIHRDLAARNILVGE 138 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--cccCCcchheEEEcC
Confidence 455666899999999999999999 999999999999975
No 210
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.82 E-value=2.6e-19 Score=114.64 Aligned_cols=113 Identities=19% Similarity=0.242 Sum_probs=88.5
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||+|.++... .......+.+|+..++.++|+|++++++.+.... ...++++||+++++|..++......
T Consensus 30 vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~----- 104 (273)
T cd05035 30 VAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLG----- 104 (273)
T ss_pred EEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhcc-----
Confidence 5788877542 2233467889999999999999999999886222 2378999999999999888643211
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.....+++..+..++.|++.|+.|||+.+ ++|+|+||+||++++
T Consensus 105 -~~~~~~~~~~~~~~~~~i~~aL~~lH~~~--i~H~dlkp~Nil~~~ 148 (273)
T cd05035 105 -GLPEKLPLQTLLKFMVDIALGMEYLSNRN--FIHRDLAARNCMLRE 148 (273)
T ss_pred -CCcccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccchheEEECC
Confidence 01234667778999999999999999999 999999999999975
No 211
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.82 E-value=5.4e-20 Score=117.12 Aligned_cols=106 Identities=27% Similarity=0.426 Sum_probs=89.0
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|.+.... .....+.+.+|++++++++||||+.+++.+. +....++++||+.+++|..++.....
T Consensus 28 ~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~---------- 96 (258)
T cd05578 28 FAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQ-DEENMYLVVDLLLGGDLRYHLSQKVK---------- 96 (258)
T ss_pred EEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhc-CCCeEEEEEeCCCCCCHHHHHHhcCC----------
Confidence 4778776542 2234678889999999999999999999998 77889999999999999998876433
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++|+||+|+||++++
T Consensus 97 --l~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~ 135 (258)
T cd05578 97 --FSEEQVKFWICEIVLALEYLHSKG--IIHRDIKPDNILLDE 135 (258)
T ss_pred --cCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEEcC
Confidence 344455899999999999999999 999999999999875
No 212
>KOG4257|consensus
Probab=99.82 E-value=6.3e-20 Score=126.38 Aligned_cols=106 Identities=25% Similarity=0.327 Sum_probs=94.0
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||||.-+.+...+..+.|+.|..++++++||||++++|+|. ....|+|||.+.-|.|..++..+.. .
T Consensus 421 VAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~--e~P~WivmEL~~~GELr~yLq~nk~-----------s 487 (974)
T KOG4257|consen 421 VAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV--EQPMWIVMELAPLGELREYLQQNKD-----------S 487 (974)
T ss_pred eeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee--ccceeEEEecccchhHHHHHHhccc-----------c
Confidence 68999888877778999999999999999999999999997 4668899999999999999987543 3
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
++......+++|++.++.|||+.+ ++||||..+|||+.+
T Consensus 488 L~l~tL~ly~~Qi~talaYLeSkr--fVHRDIAaRNiLVsS 526 (974)
T KOG4257|consen 488 LPLRTLTLYCYQICTALAYLESKR--FVHRDIAARNILVSS 526 (974)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhc--hhhhhhhhhheeecC
Confidence 444455899999999999999999 999999999999865
No 213
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.82 E-value=2e-19 Score=116.32 Aligned_cols=106 Identities=27% Similarity=0.411 Sum_probs=87.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+...........+.+|+.+++.++|+||+.+++++. +....++++||+. ++|.+++.... ..
T Consensus 33 ~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~-~~L~~~~~~~~-----------~~ 99 (291)
T cd07844 33 VALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIH-TKKTLTLVFEYLD-TDLKQYMDDCG-----------GG 99 (291)
T ss_pred EEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEe-cCCeEEEEEecCC-CCHHHHHHhCC-----------CC
Confidence 57888775533334456778999999999999999999998 7788999999998 58988876532 13
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 100 ~~~~~~~~~~~ql~~al~~lH~~~--i~H~dl~p~nil~~~ 138 (291)
T cd07844 100 LSMHNVRLFLFQLLRGLAYCHQRR--VLHRDLKPQNLLISE 138 (291)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--eecccCCHHHEEEcC
Confidence 445566899999999999999999 999999999999975
No 214
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.82 E-value=2.1e-19 Score=116.18 Aligned_cols=108 Identities=23% Similarity=0.272 Sum_probs=87.8
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|.+.... .......+.+|+++++.++|++++.+.+.+. ..+..++++||+.+++|...+...+.
T Consensus 28 ~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~---------- 96 (285)
T cd05632 28 YACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYE-TKDALCLVLTIMNGGDLKFHIYNMGN---------- 96 (285)
T ss_pred EEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEe-cCCEEEEEEEeccCccHHHHHHHhcC----------
Confidence 5778776542 1223455778999999999999999999998 67789999999999999877754221
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+++..+..++.|++.|+.|||+.+ ++|+|+||+||++++
T Consensus 97 ~~~~~~~~~~~~~ql~~~l~~lH~~~--iiH~dikp~Nili~~ 137 (285)
T cd05632 97 PGFEEERALFYAAEILCGLEDLHREN--TVYRDLKPENILLDD 137 (285)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEECC
Confidence 24566677999999999999999999 999999999999864
No 215
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.82 E-value=2e-19 Score=115.00 Aligned_cols=91 Identities=27% Similarity=0.375 Sum_probs=79.6
Q ss_pred HHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHH
Q psy4991 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVS 95 (122)
Q Consensus 16 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 95 (122)
+.+.+|+.++++++|+||+++++.+. +....++++||+++++|..++...+. +.+..+..++.|++.
T Consensus 51 ~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~------------l~~~~~~~~~~~l~~ 117 (267)
T cd06628 51 DALAREIALLKELQHENIVQYLGSSL-DADHLNIFLEYVPGGSVAALLNNYGA------------FEETLVRNFVRQILK 117 (267)
T ss_pred HHHHHHHHHHHhcCCCCeeeEEEEEE-eCCccEEEEEecCCCCHHHHHHhccC------------ccHHHHHHHHHHHHH
Confidence 56778999999999999999999988 66788899999999999999976443 334455899999999
Q ss_pred HHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 96 ALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 96 ~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
++.|||+.+ ++|+||+|+||++++
T Consensus 118 ~l~~lH~~~--ivH~di~p~nil~~~ 141 (267)
T cd06628 118 GLNYLHNRG--IIHRDIKGANILVDN 141 (267)
T ss_pred HHHHHHhcC--cccccCCHHHEEEcC
Confidence 999999999 999999999999874
No 216
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.82 E-value=1.9e-19 Score=116.21 Aligned_cols=106 Identities=26% Similarity=0.429 Sum_probs=88.6
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|++...........+.+|+++++.++|+||+++++.+. .....++++||+++++|..++...+.
T Consensus 33 ~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~------------ 99 (284)
T cd06620 33 MAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFL-NENNICMCMEFMDCGSLDRIYKKGGP------------ 99 (284)
T ss_pred EEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEe-cCCEEEEEEecCCCCCHHHHHHhccC------------
Confidence 46777765544445678889999999999999999999998 66889999999999999988865433
Q ss_pred CChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.+++.++.|||+ .+ ++|+|++|+||+++.
T Consensus 100 ~~~~~~~~~~~~i~~~l~~LH~~~~--i~H~dl~p~nil~~~ 139 (284)
T cd06620 100 IPVEILGKIAVAVVEGLTYLYNVHR--IMHRDIKPSNILVNS 139 (284)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcC--eeccCCCHHHEEECC
Confidence 4455558999999999999997 47 999999999999875
No 217
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.82 E-value=1.7e-19 Score=116.07 Aligned_cols=105 Identities=20% Similarity=0.307 Sum_probs=88.1
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+.........+.+.+|+.+++.++|+||+.+++.+. .....++++||+++++|.+++.. . .
T Consensus 32 vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~-~------------~ 97 (277)
T cd06642 32 VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYL-KGTKLWIIMEYLGGGSALDLLKP-G------------P 97 (277)
T ss_pred EEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccc-cCCceEEEEEccCCCcHHHHhhc-C------------C
Confidence 47887775533445567889999999999999999999998 67788999999999999888753 1 3
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++|+||+|+||++++
T Consensus 98 ~~~~~~~~~~~~i~~~l~~lH~~~--ivH~dl~p~ni~i~~ 136 (277)
T cd06642 98 LEETYIATILREILKGLDYLHSER--KIHRDIKAANVLLSE 136 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC--eeccCCChheEEEeC
Confidence 445566899999999999999999 999999999999864
No 218
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.82 E-value=3e-19 Score=116.82 Aligned_cols=108 Identities=29% Similarity=0.446 Sum_probs=89.1
Q ss_pred CeeeeccCCCCC--cchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNLNL--PFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|.+...... ...+.+..|+++++.++|+||+++++.+. .....++++||+.+++|.+++.....
T Consensus 29 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~---------- 97 (316)
T cd05574 29 FALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ-TETYLCLVMDYCPGGELFRLLQRQPG---------- 97 (316)
T ss_pred EEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee-cCCEEEEEEEecCCCCHHHHHHhCCC----------
Confidence 478887765222 24567889999999999999999999998 67789999999999999998864321
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..+..++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 98 ~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~ 138 (316)
T cd05574 98 KCLSEEVARFYAAEVLLALEYLHLLG--IVYRDLKPENILLHE 138 (316)
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChHHeEEcC
Confidence 23455566889999999999999999 999999999999974
No 219
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.82 E-value=1.2e-19 Score=115.73 Aligned_cols=106 Identities=29% Similarity=0.418 Sum_probs=88.9
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|.+.... .....+.+.+|+.+++.++|+||+.+++.+. +....++++||+.+++|.+++.....
T Consensus 21 ~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~---------- 89 (262)
T cd05572 21 FALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFK-DKKYIYMLMEYCLGGELWTILRDRGL---------- 89 (262)
T ss_pred EEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEE-cCCccEEEEecCCCCcHHHHHhhcCC----------
Confidence 4778876542 2235577889999999999999999999987 77889999999999999999876433
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|+|+.+ ++|+|++|+||+++.
T Consensus 90 --l~~~~~~~~~~~i~~~l~~lH~~~--~~h~dl~~~nilv~~ 128 (262)
T cd05572 90 --FDEYTARFYIACVVLAFEYLHNRG--IIYRDLKPENLLLDS 128 (262)
T ss_pred --CCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEEcC
Confidence 344455889999999999999999 999999999999874
No 220
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.81 E-value=3.4e-19 Score=114.18 Aligned_cols=113 Identities=20% Similarity=0.210 Sum_probs=87.2
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
+|+|.++... +....+.+.+|+.+++.++|+||+++++.+... ....++++||+.+|+|.+++......
T Consensus 29 ~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~----- 103 (272)
T cd05075 29 VAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLG----- 103 (272)
T ss_pred EEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhccc-----
Confidence 4677776542 333467788999999999999999999987411 12467899999999998887542210
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.....+.+..+..++.|++.|+.|||+.+ ++|+|+||+||++++
T Consensus 104 -~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~ 147 (272)
T cd05075 104 -DCPQYLPTQMLVKFMTDIASGMEYLSSKS--FIHRDLAARNCMLNE 147 (272)
T ss_pred -CCcccCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhheEEcC
Confidence 01124566777999999999999999999 999999999999874
No 221
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.81 E-value=2.6e-19 Score=115.19 Aligned_cols=108 Identities=25% Similarity=0.299 Sum_probs=88.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|.++........+.+.+|+.+++.++|+|++.+++++.. .....++++||+++++|.+++.....
T Consensus 36 ~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~----------- 104 (284)
T cd05038 36 VAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRD----------- 104 (284)
T ss_pred EEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCcc-----------
Confidence 478888765332245788999999999999999999998862 24578899999999999999875331
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 105 ~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~nil~~~ 144 (284)
T cd05038 105 QINLKRLLLFSSQICKGMDYLGSQR--YIHRDLAARNILVES 144 (284)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcC
Confidence 3455566899999999999999999 999999999999975
No 222
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.81 E-value=3.8e-19 Score=112.78 Aligned_cols=107 Identities=25% Similarity=0.350 Sum_probs=88.6
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+.........+.+.+|+.++++++|+||+.+++.+. +....++++||+.+++|.+++.... ..
T Consensus 22 v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~l~~~l~~~~-----------~~ 89 (251)
T cd05041 22 VAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV-QKQPIYIVMELVPGGSLLTFLRKKK-----------NR 89 (251)
T ss_pred EEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-cCCCeEEEEEcCCCCcHHHHHHhcC-----------CC
Confidence 57787765533335577889999999999999999999988 6678889999999999999886532 13
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.+++.++.|||+.+ ++|+|++|+||+++.
T Consensus 90 ~~~~~~~~~~~~~~~~l~~lH~~~--i~h~di~p~nili~~ 128 (251)
T cd05041 90 LTVKKLLQMSLDAAAGMEYLESKN--CIHRDLAARNCLVGE 128 (251)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--EehhhcCcceEEEcC
Confidence 345556889999999999999999 999999999999974
No 223
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.81 E-value=3.2e-19 Score=113.27 Aligned_cols=108 Identities=21% Similarity=0.328 Sum_probs=89.9
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|.+... .+....+.+.+|+++++.++|+|++.+++.+. ..+..++++||+++++|.+++.... ..
T Consensus 28 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~----------~~ 96 (256)
T cd08220 28 VIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFL-EDKALMIVMEYAPGGTLAEYIQKRC----------NS 96 (256)
T ss_pred EEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEe-cCCEEEEEEecCCCCCHHHHHHHhc----------cc
Confidence 467877654 23345677889999999999999999999887 6778899999999999999987532 12
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..+..++.+++.++.|+|+.+ ++|+|++|+||+++.
T Consensus 97 ~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~ 136 (256)
T cd08220 97 LLDEDTILHFFVQILLALHHVHTKL--ILHRDLKTQNILLDK 136 (256)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcC
Confidence 3556677899999999999999999 999999999999963
No 224
>KOG2345|consensus
Probab=99.81 E-value=7.7e-20 Score=113.70 Aligned_cols=112 Identities=22% Similarity=0.233 Sum_probs=91.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeee----eCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFE----IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 76 (122)
+|+|.+.... .+..+..++|++..++++|||++++++... +.....|++++|...|+|.+.+.....
T Consensus 49 YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~-------- 119 (302)
T KOG2345|consen 49 YALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKI-------- 119 (302)
T ss_pred hhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhh--------
Confidence 4667666553 446788899999999999999999998873 123468999999999999998875321
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
....+.+.+++.++.++|.|+.+||+..+|.+|||+||+||++++
T Consensus 120 kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~ 164 (302)
T KOG2345|consen 120 KGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD 164 (302)
T ss_pred cCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC
Confidence 123456778899999999999999999999999999999999976
No 225
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.81 E-value=3.6e-19 Score=113.72 Aligned_cols=106 Identities=17% Similarity=0.260 Sum_probs=87.1
Q ss_pred CeeeeccCCCC-----CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNLN-----LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~~-----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
+|+|.+..... ....+.+.+|+++++.++|+||+.+.+.+. +.+..++++||+++++|.+++.....
T Consensus 27 ~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~------- 98 (265)
T cd06631 27 IAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCL-DDNTISIFMEFVPGGSISSILNRFGP------- 98 (265)
T ss_pred EEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEee-cCCeEEEEEecCCCCcHHHHHHhcCC-------
Confidence 46777664321 112356788999999999999999999998 66889999999999999999876433
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+++..+..++.|++.++.|+|+.+ ++|+||+|+||++++
T Consensus 99 -----~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~ 137 (265)
T cd06631 99 -----LPEPVFCKYTKQILDGVAYLHNNC--VVHRDIKGNNVMLMP 137 (265)
T ss_pred -----CCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHhEEECC
Confidence 344555889999999999999999 999999999999974
No 226
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.81 E-value=1e-19 Score=115.85 Aligned_cols=106 Identities=30% Similarity=0.386 Sum_probs=88.7
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|.+.... .....+.+.+|++++++++|+|++++++.+. ..+..++++||+.+++|..++...+
T Consensus 21 ~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~----------- 88 (265)
T cd05579 21 YAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQ-GKKNLYLVMEYLPGGDLASLLENVG----------- 88 (265)
T ss_pred EEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhee-cCcEEEEEEecCCCCcHHHHHHHcC-----------
Confidence 4778776542 2234577889999999999999999999988 7788899999999999999987543
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..+..++.|++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 89 -~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~di~~~nil~~~ 128 (265)
T cd05579 89 -SLDEDVARIYIAEIVLALEYLHSNG--IIHRDLKPDNILIDS 128 (265)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHcC--eecCCCCHHHeEEcC
Confidence 3444555899999999999999999 999999999999975
No 227
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.81 E-value=4.6e-19 Score=113.03 Aligned_cols=105 Identities=25% Similarity=0.361 Sum_probs=86.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+.... ...+++.+|+.++++++|+|++.+++.+. .+..++++||+.+++|.+++..... ..
T Consensus 33 ~a~K~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~----------~~ 98 (260)
T cd05067 33 VAIKSLKQGS--MSPEAFLAEANLMKQLQHPRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPEG----------IK 98 (260)
T ss_pred EEEEEecCCC--CcHHHHHHHHHHHHhcCCcCeeeEEEEEc--cCCcEEEEEcCCCCCHHHHHHhcCC----------CC
Confidence 5788877552 34578899999999999999999998764 4568899999999999988864321 24
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+.++..++.|++.++.|||+.+ ++|+|++|+||++++
T Consensus 99 ~~~~~~~~i~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~ 137 (260)
T cd05067 99 LTINKLIDMAAQIAEGMAFIERKN--YIHRDLRAANILVSE 137 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC--eecccccHHhEEEcC
Confidence 455666899999999999999999 999999999999975
No 228
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.81 E-value=1.9e-19 Score=115.81 Aligned_cols=108 Identities=22% Similarity=0.296 Sum_probs=88.6
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|.+.... .....+.+.+|+.+++.++|||++.+++.+. ..+..|+++||+++++|.+++.....
T Consensus 21 ~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~---------- 89 (277)
T cd05577 21 YACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFE-TKDDLCLVMTLMNGGDLKYHIYNVGE---------- 89 (277)
T ss_pred EEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEe-cCCeEEEEEecCCCCcHHHHHHHcCc----------
Confidence 4677776542 2234556678999999999999999999998 67789999999999999988875431
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..+..++.|++.++.|||+.+ ++|+||+|+||++++
T Consensus 90 ~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~Nil~~~ 130 (277)
T cd05577 90 PGFPEARAIFYAAQIICGLEHLHQRR--IVYRDLKPENVLLDD 130 (277)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECC
Confidence 23455666889999999999999999 999999999999975
No 229
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.81 E-value=3.5e-19 Score=114.64 Aligned_cols=105 Identities=19% Similarity=0.285 Sum_probs=88.1
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+.........+.+.+|+.+++.+.|+|++.+++.+. +....++++||+.+++|.+++... .
T Consensus 32 vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~-~------------ 97 (277)
T cd06640 32 VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-KGTKLWIIMEYLGGGSALDLLRAG-P------------ 97 (277)
T ss_pred EEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-ECCEEEEEEecCCCCcHHHHHhcC-C------------
Confidence 47787765533344577889999999999999999999998 677899999999999999887642 2
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+.++..++.|++.|+.|+|+.+ ++|+||+|+||++++
T Consensus 98 l~~~~~~~~~~~l~~~l~~lh~~~--ivH~dl~p~Nil~~~ 136 (277)
T cd06640 98 FDEFQIATMLKEILKGLDYLHSEK--KIHRDIKAANVLLSE 136 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--ccCcCCChhhEEEcC
Confidence 344555889999999999999999 999999999999975
No 230
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.81 E-value=4.6e-19 Score=114.28 Aligned_cols=105 Identities=17% Similarity=0.184 Sum_probs=83.0
Q ss_pred eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCC
Q psy4991 2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPY 81 (122)
Q Consensus 2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 81 (122)
|+|.............+..|+..++.++|+||+++++++. ....++++||+.+|+|.+++.... ..+
T Consensus 40 ~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~--~~~~~~i~e~~~~gsL~~~l~~~~-----------~~~ 106 (279)
T cd05111 40 AIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP--GASLQLVTQLSPLGSLLDHVRQHR-----------DSL 106 (279)
T ss_pred EEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC--CCccEEEEEeCCCCcHHHHHHhcc-----------cCC
Confidence 4566544322333456777888889999999999999875 345678999999999999987532 234
Q ss_pred ChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 82 LSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 82 ~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..+..++.|++.|+.|+|+.+ ++|+||||+||+++.
T Consensus 107 ~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~nili~~ 144 (279)
T cd05111 107 DPQRLLNWCVQIAKGMYYLEEHR--MVHRNLAARNILLKS 144 (279)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcC
Confidence 55566899999999999999999 999999999999974
No 231
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.81 E-value=2.3e-19 Score=115.63 Aligned_cols=102 Identities=25% Similarity=0.450 Sum_probs=84.5
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+..+......+.+.+|+.++++++|||++.+++.+. ..+..++++||+++++|..+. .
T Consensus 29 ~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~----------------~ 91 (279)
T cd06619 29 LAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFF-VENRISICTEFMDGGSLDVYR----------------K 91 (279)
T ss_pred EEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEE-ECCEEEEEEecCCCCChHHhh----------------c
Confidence 57888766543444567889999999999999999999998 667788999999999886432 1
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 92 ~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nill~~ 130 (279)
T cd06619 92 IPEHVLGRIAVAVVKGLTYLWSLK--ILHRDVKPSNMLVNT 130 (279)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCCHHHEEECC
Confidence 234455789999999999999999 999999999999974
No 232
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.81 E-value=7e-19 Score=112.26 Aligned_cols=105 Identities=24% Similarity=0.328 Sum_probs=85.6
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+... ....+.+.+|+.++++++|+|++.+++.+. ....+++|||+.+++|.+++..... ..
T Consensus 33 ~~lK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~----------~~ 98 (260)
T cd05069 33 VAIKTLKPG--TMMPEAFLQEAQIMKKLRHDKLVPLYAVVS--EEPIYIVTEFMGKGSLLDFLKEGDG----------KY 98 (260)
T ss_pred EEEEEcccC--CccHHHHHHHHHHHHhCCCCCeeeEEEEEc--CCCcEEEEEcCCCCCHHHHHhhCCC----------CC
Confidence 467776644 234577889999999999999999998875 3457899999999999998875321 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++|+||+|+||++++
T Consensus 99 ~~~~~~~~~~~~l~~al~~lH~~~--i~H~dl~~~Nill~~ 137 (260)
T cd05069 99 LKLPQLVDMAAQIADGMAYIERMN--YIHRDLRAANILVGD 137 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcC
Confidence 455666899999999999999999 999999999999975
No 233
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.81 E-value=6e-19 Score=112.77 Aligned_cols=105 Identities=24% Similarity=0.320 Sum_probs=85.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+... ....+.+.+|+++++.++|+||+.+++.+. ....++++||+.+|+|.+++..... ..
T Consensus 33 valK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~----------~~ 98 (262)
T cd05071 33 VAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS--EEPIYIVTEYMSKGSLLDFLKGEMG----------KY 98 (262)
T ss_pred EEEEecccC--ccCHHHHHHHHHHHHhCCCCCcceEEEEEC--CCCcEEEEEcCCCCcHHHHHhhccc----------cC
Confidence 577877753 223467889999999999999999998875 3457899999999999999875321 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.++.|+|+.+ ++|+|++|+||+++.
T Consensus 99 ~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~Nill~~ 137 (262)
T cd05071 99 LRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 137 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcccEEEcC
Confidence 455666899999999999999999 999999999999874
No 234
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.81 E-value=4e-19 Score=114.46 Aligned_cols=108 Identities=29% Similarity=0.457 Sum_probs=89.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.++..........+.+|+.+++.++|+|++.+++.+. +.+..++++||+. ++|..++..... ...
T Consensus 28 ~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~~---------~~~ 96 (284)
T cd07836 28 VALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIH-TENKLMLVFEYMD-KDLKKYMDTHGV---------RGA 96 (284)
T ss_pred EEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEe-eCCcEEEEEecCC-ccHHHHHHhcCC---------CCC
Confidence 57888876644445567788999999999999999999998 6677899999998 588887765321 124
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++|+|++|+||++++
T Consensus 97 ~~~~~~~~~~~qi~~~l~~lH~~~--i~h~dl~p~ni~~~~ 135 (284)
T cd07836 97 LDPNTVKSFTYQLLKGIAFCHENR--VLHRDLKPQNLLINK 135 (284)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECC
Confidence 566777999999999999999999 999999999999975
No 235
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.81 E-value=4.3e-19 Score=114.36 Aligned_cols=108 Identities=26% Similarity=0.392 Sum_probs=88.0
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.+.... .......+.+|+.+++.++|+|++++++.+. ++...++++||+. ++|.+++..... ..
T Consensus 28 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~-~~l~~~~~~~~~---------~~ 96 (285)
T cd07861 28 VAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLM-QESRLYLIFEFLS-MDLKKYLDSLPK---------GQ 96 (285)
T ss_pred EEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe-eCCeEEEEEecCC-CCHHHHHhcCCC---------CC
Confidence 5788776542 2334567788999999999999999999998 6778899999998 788887764221 12
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 97 ~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~ 136 (285)
T cd07861 97 YMDAELVKSYLYQILQGILFCHSRR--VLHRDLKPQNLLIDN 136 (285)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEEcC
Confidence 4566677999999999999999999 999999999999964
No 236
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.81 E-value=4.6e-19 Score=112.66 Aligned_cols=109 Identities=25% Similarity=0.364 Sum_probs=87.9
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|.+.... .....+.+.+|+.++++++|+|++.+.+.+.......++++||+++++|.+.+.... ..
T Consensus 28 ~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~----------~~ 97 (257)
T cd08223 28 YVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQK----------GK 97 (257)
T ss_pred EEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhc----------CC
Confidence 4677776442 233456678899999999999999999887634556889999999999998887521 13
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+++.+++.++.+++.|+.++|+.+ ++|+||+|+||+++.
T Consensus 98 ~l~~~~~~~~~~~l~~~l~~lH~~~--i~H~di~p~nil~~~ 137 (257)
T cd08223 98 LLPENQVVEWFVQIAMALQYLHEKH--ILHRDLKTQNVFLTR 137 (257)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCchhEEEec
Confidence 4566777999999999999999999 999999999999864
No 237
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.81 E-value=1.6e-19 Score=116.58 Aligned_cols=109 Identities=26% Similarity=0.321 Sum_probs=89.3
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+...........+.+|+.++++++|+||+++++.+. ..+..++++||+++++|..++..... ...
T Consensus 29 ~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~---------~~~ 98 (286)
T cd06622 29 MAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFF-IEGAVYMCMEYMDAGSLDKLYAGGVA---------TEG 98 (286)
T ss_pred EEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhee-cCCeEEEEEeecCCCCHHHHHHhccc---------cCC
Confidence 47787765433334567889999999999999999999988 67889999999999999888875211 124
Q ss_pred CChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.++.|||+ .+ ++|+||+|+||+++.
T Consensus 99 ~~~~~~~~~~~~i~~~l~~LH~~~~--i~H~dl~p~nil~~~ 138 (286)
T cd06622 99 IPEDVLRRITYAVVKGLKFLKEEHN--IIHRDVKPTNVLVNG 138 (286)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCC--EeeCCCCHHHEEECC
Confidence 5666779999999999999997 47 999999999999974
No 238
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.81 E-value=3.7e-19 Score=113.90 Aligned_cols=108 Identities=19% Similarity=0.229 Sum_probs=86.3
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+.... ....+.+.+|+.+++.++|+||+++++++. ..+..++++||+.+++|..++..... ...
T Consensus 36 v~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~---------~~~ 104 (268)
T cd06624 36 IAIKEIPERD-SRYVQPLHEEIALHSYLKHRNIVQYLGSDS-ENGFFKIFMEQVPGGSLSALLRSKWG---------PLK 104 (268)
T ss_pred EEEEEecCCC-HHHHHHHHHHHHHHHhcCCCCeeeeeeeec-cCCEEEEEEecCCCCCHHHHHHHhcc---------cCC
Confidence 4667665442 224567889999999999999999999988 67888999999999999998875311 001
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+..+..++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 105 ~~~~~~~~~~~qi~~al~~lH~~~--i~h~dl~p~nil~~~ 143 (268)
T cd06624 105 DNEQTIIFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLVNT 143 (268)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcC
Confidence 134455788999999999999999 999999999999964
No 239
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.81 E-value=2.4e-19 Score=114.60 Aligned_cols=110 Identities=25% Similarity=0.384 Sum_probs=89.3
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|||.+.... .....+.+.+|+.+++.++|+||+.+++.+. ..+..++++||+.+++|.+++..... ..
T Consensus 30 ~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~--------~~ 100 (267)
T cd08229 30 VALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-EDNELNIVLELADAGDLSRMIKHFKK--------QK 100 (267)
T ss_pred EEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeE-eCCeEEEEEEecCCCCHHHHHHHhhc--------cC
Confidence 4677665431 2234567889999999999999999999998 66788899999999999988864211 12
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+++..++.++.|++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 101 ~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~ 141 (267)
T cd08229 101 RLIPEKTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITA 141 (267)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcC
Confidence 34567777999999999999999999 999999999999974
No 240
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.81 E-value=2.1e-19 Score=114.72 Aligned_cols=107 Identities=30% Similarity=0.467 Sum_probs=90.5
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+.........+.+.+|+++++.++|+||+.+++.+. ..+..++++||+.+++|.+++.... ..
T Consensus 29 ~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-----------~~ 96 (265)
T cd06605 29 MAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFY-NNGDISICMEYMDGGSLDKILKEVQ-----------GR 96 (265)
T ss_pred EEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeee-cCCEEEEEEEecCCCcHHHHHHHcc-----------CC
Confidence 47787776644445677889999999999999999999998 6688999999999999999987531 24
Q ss_pred CChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~ 121 (122)
+++..+..++.|++.++.|+|+ .+ ++|+||+|+||++++
T Consensus 97 ~~~~~~~~~~~~l~~~l~~lH~~~~--i~H~dl~~~ni~~~~ 136 (265)
T cd06605 97 IPERILGKIAVAVLKGLTYLHEKHK--IIHRDVKPSNILVNS 136 (265)
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCC--eecCCCCHHHEEECC
Confidence 4556668999999999999999 88 999999999999975
No 241
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.81 E-value=3.8e-19 Score=115.57 Aligned_cols=104 Identities=18% Similarity=0.306 Sum_probs=86.4
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+..... ...+.+.+|+.+++.++|+|++.+++.+. .....++++||+.+++|..++... .
T Consensus 48 v~ik~~~~~~~-~~~~~~~~e~~~l~~~~h~~v~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~-------------~ 112 (296)
T cd06654 48 VAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTET-------------C 112 (296)
T ss_pred EEEEEEecCCc-chHHHHHHHHHHHHhCCCCCEeeEEEEEE-eCCEEEEeecccCCCCHHHHHHhc-------------C
Confidence 46776665422 23567889999999999999999999998 677899999999999999988642 2
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+.++..++.|++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 113 ~~~~~~~~i~~ql~~aL~~LH~~g--i~H~dLkp~Nill~~ 151 (296)
T cd06654 113 MDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGM 151 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcC
Confidence 344556899999999999999999 999999999999975
No 242
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.81 E-value=3.6e-19 Score=114.14 Aligned_cols=91 Identities=24% Similarity=0.315 Sum_probs=79.3
Q ss_pred HHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHH
Q psy4991 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVS 95 (122)
Q Consensus 16 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 95 (122)
+.+.+|+.+++.++|+|++.+++.+. ..+..++++||+.+++|.+++...+. +.+..+..++.|++.
T Consensus 53 ~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~------------l~~~~~~~~~~qi~~ 119 (272)
T cd06629 53 KALRSEIETLKDLDHLNIVQYLGFET-TEEYLSIFLEYVPGGSIGSCLRTYGR------------FEEQLVRFFTEQVLE 119 (272)
T ss_pred HHHHHHHHHHHhcCCCCcceEEEEec-cCCceEEEEecCCCCcHHHHHhhccC------------CCHHHHHHHHHHHHH
Confidence 46778999999999999999999987 67788999999999999998876433 344455889999999
Q ss_pred HHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 96 ALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 96 ~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
++.|||+.+ ++|+|++|+||+++.
T Consensus 120 ~l~~lH~~~--i~H~dl~~~nil~~~ 143 (272)
T cd06629 120 GLAYLHSKG--ILHRDLKADNLLVDA 143 (272)
T ss_pred HHHHHhhCC--eeecCCChhhEEEcC
Confidence 999999999 999999999999864
No 243
>KOG0193|consensus
Probab=99.81 E-value=4.9e-20 Score=125.85 Aligned_cols=106 Identities=19% Similarity=0.295 Sum_probs=89.3
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||||+++.. ..+...+.|.+|+.++++-+|.||+-+.|+|. .... .||..||.|.+|..++.-.+.
T Consensus 417 VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~-~p~~-AIiTqwCeGsSLY~hlHv~et----------- 483 (678)
T KOG0193|consen 417 VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACM-NPPL-AIITQWCEGSSLYTHLHVQET----------- 483 (678)
T ss_pred eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhc-CCce-eeeehhccCchhhhhccchhh-----------
Confidence 799999976 34457799999999999999999999999997 4444 799999999999988864321
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..-....++.|+++||.|||.++ |+|+|||.-||++.+
T Consensus 484 kfdm~~~idIAqQiaqGM~YLHAK~--IIHrDLKSnNIFl~~ 523 (678)
T KOG0193|consen 484 KFDMNTTIDIAQQIAQGMDYLHAKN--IIHRDLKSNNIFLHE 523 (678)
T ss_pred hhhHHHHHHHHHHHHHhhhhhhhhh--hhhhhccccceEEcc
Confidence 2222344899999999999999999 999999999999975
No 244
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.81 E-value=4.3e-19 Score=116.14 Aligned_cols=111 Identities=25% Similarity=0.401 Sum_probs=85.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|.+... .....+.+|+.+++.++||||+++++.+.. .....++++||+. ++|..++........ .....
T Consensus 31 ~aiK~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~---~~~~~ 103 (317)
T cd07868 31 YALKQIEGT---GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKA---NKKPV 103 (317)
T ss_pred EEEEEECCC---CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-CCHHHHHHhcccccc---cCCcc
Confidence 467776543 234567899999999999999999998852 3456889999997 788888765332111 01123
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
.+++..+..++.|++.|+.|||+.+ ++||||||+|||++
T Consensus 104 ~l~~~~~~~i~~qi~~al~~LH~~~--ivHrDlkp~Nil~~ 142 (317)
T cd07868 104 QLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVM 142 (317)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEe
Confidence 5677888999999999999999999 99999999999983
No 245
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.81 E-value=6.6e-19 Score=113.53 Aligned_cols=105 Identities=33% Similarity=0.543 Sum_probs=85.6
Q ss_pred eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCC
Q psy4991 2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPY 81 (122)
Q Consensus 2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 81 (122)
|+|.+... .....+.+.+|+.+++.++|+|++.+++.+. .....++++||+++++|..++.... .++
T Consensus 34 ~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-~~~~~~~v~e~~~~~~l~~~~~~~~-----------~~l 100 (282)
T cd06643 34 AAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAFY-YENNLWILIEFCAGGAVDAVMLELE-----------RPL 100 (282)
T ss_pred EEEEeCCC-CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEe-eCCEEEEEEEecCCCcHHHHHHhcC-----------CCC
Confidence 55655443 2234567888999999999999999999998 6778899999999999988765421 234
Q ss_pred ChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 82 LSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 82 ~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..+..++.|++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 101 ~~~~~~~~~~qi~~~L~~LH~~~--i~H~dlkp~nili~~ 138 (282)
T cd06643 101 TEPQIRVVCKQTLEALNYLHENK--IIHRDLKAGNILFTL 138 (282)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEcc
Confidence 55666899999999999999999 999999999999864
No 246
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.80 E-value=4.6e-19 Score=112.90 Aligned_cols=106 Identities=29% Similarity=0.415 Sum_probs=90.0
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+.........+.+.+|+..+..++|+|++++++.+. .....++++||+++++|.+++.....
T Consensus 29 ~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~------------ 95 (264)
T cd06623 29 YALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFY-KEGEISIVLEYMDGGSLADLLKKVGK------------ 95 (264)
T ss_pred EEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-cCCeEEEEEEecCCCcHHHHHHHcCC------------
Confidence 46777776533345678899999999999999999999998 66889999999999999999876433
Q ss_pred CChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.++.|+|+ .+ ++|+|++|+||+++.
T Consensus 96 l~~~~~~~~~~~l~~~l~~lh~~~~--~~H~~l~~~ni~~~~ 135 (264)
T cd06623 96 IPEPVLAYIARQILKGLDYLHTKRH--IIHRDIKPSNLLINS 135 (264)
T ss_pred CCHHHHHHHHHHHHHHHHHHhccCC--CccCCCCHHHEEECC
Confidence 4455558999999999999999 99 999999999999974
No 247
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.80 E-value=7.3e-19 Score=113.68 Aligned_cols=108 Identities=27% Similarity=0.481 Sum_probs=83.6
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhC---CCCCccceeeeeee----CCCeEEEEEeccCCCCHHHHHHhccchhHH
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKAL---DHPRVVKLYDVFEI----DANSFCTVLEYCDGHDLDFYLKQHKTIAER 72 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~---~h~~i~~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 72 (122)
||+|.+.... ..+....+.+|+.+++.+ +||||+++++++.. ....+++++||+. ++|.+++....
T Consensus 30 vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~----- 103 (290)
T cd07862 30 VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVP----- 103 (290)
T ss_pred EEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCC-----
Confidence 5788776542 233445667788877765 69999999998841 2456889999997 78988886432
Q ss_pred hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
...+++..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 104 -----~~~~~~~~~~~i~~qi~~aL~~lH~~~--iiH~dlkp~Nil~~~ 145 (290)
T cd07862 104 -----EPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTS 145 (290)
T ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEcC
Confidence 123556677999999999999999999 999999999999974
No 248
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.80 E-value=5.6e-19 Score=114.84 Aligned_cols=104 Identities=19% Similarity=0.298 Sum_probs=87.1
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+.... ....+.+.+|+.+++.++|+|++.+++.+. .....++++||+++++|.+++... .
T Consensus 47 vaiK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~-------------~ 111 (297)
T cd06656 47 VAIKQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTET-------------C 111 (297)
T ss_pred EEEEEEecCc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEeecccCCCCHHHHHHhC-------------C
Confidence 5778776542 223467788999999999999999999998 677899999999999999987642 2
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+.++..++.|++.++.|||+.+ ++|+||+|+||+++.
T Consensus 112 ~~~~~~~~~~~~l~~~L~~LH~~~--i~H~dL~p~Nili~~ 150 (297)
T cd06656 112 MDEGQIAAVCRECLQALDFLHSNQ--VIHRDIKSDNILLGM 150 (297)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECC
Confidence 344566899999999999999999 999999999999974
No 249
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.80 E-value=4.5e-19 Score=114.77 Aligned_cols=106 Identities=27% Similarity=0.471 Sum_probs=85.5
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+......+....+.+|+.+++.++|+||+.+++++. .....++++||+. +++.+.+.... ..
T Consensus 33 ~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~-----------~~ 99 (291)
T cd07870 33 VALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIH-TKETLTFVFEYMH-TDLAQYMIQHP-----------GG 99 (291)
T ss_pred EEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEe-cCCeEEEEEeccc-CCHHHHHHhCC-----------CC
Confidence 47888776544444556788999999999999999999988 6778899999996 77776665321 12
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 100 ~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nil~~~ 138 (291)
T cd07870 100 LHPYNVRLFMFQLLRGLAYIHGQH--ILHRDLKPQNLLISY 138 (291)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEEcC
Confidence 344555889999999999999999 999999999999864
No 250
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.80 E-value=4.7e-19 Score=114.94 Aligned_cols=106 Identities=25% Similarity=0.395 Sum_probs=87.5
Q ss_pred CeeeeccCCCC----CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991 1 MCAKLLTTNLN----LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76 (122)
Q Consensus 1 vavK~~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 76 (122)
||+|.+..... ......+..|+.+++.++|+|++.+++.+. +....++++||+ +++|.+++....
T Consensus 28 v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~lv~e~~-~~~L~~~i~~~~--------- 96 (298)
T cd07841 28 VAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFG-HKSNINLVFEFM-ETDLEKVIKDKS--------- 96 (298)
T ss_pred EEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheee-cCCEEEEEEccc-CCCHHHHHhccC---------
Confidence 57888775532 223456678999999999999999999998 677899999999 799999887532
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..+..++.|++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 97 --~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nill~~ 137 (298)
T cd07841 97 --IVLTPADIKSYMLMTLRGLEYLHSNW--ILHRDLKPNNLLIAS 137 (298)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCChhhEEEcC
Confidence 13455666899999999999999999 999999999999975
No 251
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.80 E-value=2.4e-19 Score=120.66 Aligned_cols=89 Identities=25% Similarity=0.368 Sum_probs=76.5
Q ss_pred HHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHH
Q psy4991 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSA 96 (122)
Q Consensus 17 ~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 96 (122)
...+|+.+++.++|+||+++++.+. .....+++||++. ++|..++.... .+.+..++.++.|++.|
T Consensus 132 ~~~~E~~il~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~------------~l~~~~~~~i~~ql~~a 197 (392)
T PHA03207 132 TPGREIDILKTISHRAIINLIHAYR-WKSTVCMVMPKYK-CDLFTYVDRSG------------PLPLEQAITIQRRLLEA 197 (392)
T ss_pred cHHHHHHHHHhcCCCCccceeeeEe-eCCEEEEEehhcC-CCHHHHHHhcC------------CCCHHHHHHHHHHHHHH
Confidence 3568999999999999999999998 6678899999997 78888875433 34555669999999999
Q ss_pred HHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 97 LKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 97 l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.|||+.+ ++||||||+|||++.
T Consensus 198 L~~LH~~g--ivHrDlkp~Nill~~ 220 (392)
T PHA03207 198 LAYLHGRG--IIHRDVKTENIFLDE 220 (392)
T ss_pred HHHHHHCC--ccccCCCHHHEEEcC
Confidence 99999999 999999999999974
No 252
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.80 E-value=9.8e-19 Score=111.52 Aligned_cols=105 Identities=26% Similarity=0.352 Sum_probs=86.5
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+.... ...+++.+|+.++++++|++++.+++.+. ....+++|||+.+++|.+++.... ...
T Consensus 33 ~~~k~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~----------~~~ 98 (260)
T cd05070 33 VAVKTLKPGT--MSPESFLEEAQIMKKLRHDKLVQLYAVVS--EEPIYIVTEYMSKGSLLDFLKDGE----------GRA 98 (260)
T ss_pred eEEEEecCCC--CCHHHHHHHHHHHHhcCCCceEEEEeEEC--CCCcEEEEEecCCCcHHHHHHhcC----------CCC
Confidence 4677776542 23467899999999999999999998875 345789999999999999887532 123
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.++.|||+.+ ++|+|++|+||++++
T Consensus 99 ~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~Nili~~ 137 (260)
T cd05070 99 LKLPNLVDMAAQVAAGMAYIERMN--YIHRDLRSANILVGD 137 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEEeC
Confidence 556677999999999999999999 999999999999875
No 253
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.80 E-value=6.4e-19 Score=112.02 Aligned_cols=108 Identities=19% Similarity=0.372 Sum_probs=88.5
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.+... ........+.+|+.++++++|+|++.+.+.+. +.+..++++||+.+++|.+.+..... .
T Consensus 28 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~----------~ 96 (256)
T cd08218 28 YVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFE-ENGNLYIVMDYCEGGDLYKKINAQRG----------V 96 (256)
T ss_pred EEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeec-CCCeEEEEEecCCCCcHHHHHHhccC----------C
Confidence 467776543 22334567889999999999999999999998 77889999999999999988865321 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+.+++.++.|++.++.|||+.+ ++|+|++|+||+++.
T Consensus 97 ~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~l~~~nil~~~ 136 (256)
T cd08218 97 LFPEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTK 136 (256)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcC
Confidence 3455666899999999999999999 999999999999974
No 254
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.80 E-value=5.8e-19 Score=115.02 Aligned_cols=106 Identities=23% Similarity=0.263 Sum_probs=85.3
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+...........+.+|+.+++.++|+||+++++.+. .. ..++++||+++|+|.+++.... ..
T Consensus 39 vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~-~~-~~~~v~e~~~~g~l~~~~~~~~-----------~~ 105 (303)
T cd05110 39 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL-SP-TIQLVTQLMPHGCLLDYVHEHK-----------DN 105 (303)
T ss_pred EEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEc-CC-CceeeehhcCCCCHHHHHHhcc-----------cC
Confidence 36777765543334456889999999999999999999986 33 3568999999999998886532 13
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 106 ~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dikp~Nill~~ 144 (303)
T cd05110 106 IGSQLLLNWCVQIAKGMMYLEERR--LVHRDLAARNVLVKS 144 (303)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcC--eeccccccceeeecC
Confidence 445566899999999999999999 999999999999964
No 255
>KOG0662|consensus
Probab=99.80 E-value=9e-20 Score=109.37 Aligned_cols=106 Identities=29% Similarity=0.481 Sum_probs=88.7
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhcc-chhHHhhhhcC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~ 78 (122)
||+|...-+ .+++.+...++|+-+++.++|.||+++++... +.+.+.+|+|||. .+|..+++... .+....
T Consensus 30 valkrvrlddddegvpssalreicllkelkhknivrl~dvlh-sdkkltlvfe~cd-qdlkkyfdslng~~d~~~----- 102 (292)
T KOG0662|consen 30 VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-SDKKLTLVFEFCD-QDLKKYFDSLNGDLDPEI----- 102 (292)
T ss_pred EEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhc-cCceeEEeHHHhh-HHHHHHHHhcCCcCCHHH-----
Confidence 577777655 35667788999999999999999999999998 6677789999997 78988888643 333333
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
+..++.|++.|+.|+|+.+ +.|||+||+|+++.++
T Consensus 103 -------~rsfmlqllrgl~fchshn--vlhrdlkpqnllin~n 137 (292)
T KOG0662|consen 103 -------VRSFMLQLLRGLGFCHSHN--VLHRDLKPQNLLINRN 137 (292)
T ss_pred -------HHHHHHHHHhhhhhhhhhh--hhhccCCcceEEeccC
Confidence 3899999999999999999 9999999999999753
No 256
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.80 E-value=7.5e-19 Score=113.64 Aligned_cols=111 Identities=32% Similarity=0.465 Sum_probs=89.5
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|.+...........+.+|++++++++|+||+.+++.+.. ..+.+++++||+++++|.+++..... ...
T Consensus 29 ~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------~~~ 100 (287)
T cd06621 29 FALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKK--------RGG 100 (287)
T ss_pred EEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHh--------cCC
Confidence 477877765444456778999999999999999999998852 34578899999999999888764211 123
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..+..++.|++.++.|||+.+ ++|+|++|+||+++.
T Consensus 101 ~l~~~~~~~i~~~i~~~L~~lH~~~--i~H~dl~~~nil~~~ 140 (287)
T cd06621 101 RIGEKVLGKIAESVLKGLSYLHSRK--IIHRDIKPSNILLTR 140 (287)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEec
Confidence 4556677899999999999999999 999999999999874
No 257
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.80 E-value=1.1e-18 Score=113.05 Aligned_cols=106 Identities=27% Similarity=0.440 Sum_probs=86.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+... .....+.+.+|+.+++.++|+|++.+++.+. ..+..+++|||+++++|..++.... ..
T Consensus 40 ~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~-----------~~ 106 (292)
T cd06644 40 AAAKVIETK-SEEELEDYMVEIEILATCNHPYIVKLLGAFY-WDGKLWIMIEFCPGGAVDAIMLELD-----------RG 106 (292)
T ss_pred EEEEEeccC-CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEE-eCCeEEEEEecCCCCcHHHHHHhhc-----------CC
Confidence 456666544 2334567888999999999999999999988 6678899999999999988775421 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.++.|||+.+ ++|+|++|+||+++.
T Consensus 107 l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nili~~ 145 (292)
T cd06644 107 LTEPQIQVICRQMLEALQYLHSMK--IIHRDLKAGNVLLTL 145 (292)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC--eeecCCCcceEEEcC
Confidence 455666999999999999999999 999999999999974
No 258
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.80 E-value=1.4e-19 Score=115.13 Aligned_cols=106 Identities=31% Similarity=0.528 Sum_probs=87.0
Q ss_pred CeeeeccCCCCCc-chHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLP-FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|.+....... ......+|+.+++.++|+||+++++.+. .....++++|++.+++|.+++.....
T Consensus 27 ~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-~~~~~~~v~~~~~~~~L~~~l~~~~~----------- 94 (260)
T PF00069_consen 27 VAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQ-DDNYLYIVMEYCPGGSLQDYLQKNKP----------- 94 (260)
T ss_dssp EEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEE-ESSEEEEEEEEETTEBHHHHHHHHSS-----------
T ss_pred EEEEEeccccccccccchhhhhhhcccccccccccccccccc-cccccccccccccccccccccccccc-----------
Confidence 4788887663222 2233456999999999999999999998 67888899999998899999984333
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.+||+.+ ++|+||||+||+++.
T Consensus 95 -~~~~~~~~~~~qi~~~L~~Lh~~~--i~H~dikp~NIl~~~ 133 (260)
T PF00069_consen 95 -LSEEEILKIAYQILEALAYLHSKG--IVHRDIKPENILLDE 133 (260)
T ss_dssp -BBHHHHHHHHHHHHHHHHHHHHTT--EEESSBSGGGEEEST
T ss_pred -cccccccccccccccccccccccc--ccccccccccccccc
Confidence 344555999999999999999999 999999999999984
No 259
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.80 E-value=5.1e-19 Score=114.48 Aligned_cols=106 Identities=21% Similarity=0.282 Sum_probs=86.8
Q ss_pred CeeeeccCCC---CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991 1 MCAKLLTTNL---NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76 (122)
Q Consensus 1 vavK~~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 76 (122)
||+|+++... .....+.+.+|+.++.++ +|+||+.+++++. .....++++||+++++|.+++.....
T Consensus 31 ~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~-------- 101 (290)
T cd05613 31 YAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ-TDTKLHLILDYINGGELFTHLSQRER-------- 101 (290)
T ss_pred EEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEee-cCCeEEEEEecCCCCcHHHHHHHcCC--------
Confidence 4778776531 223456778899999999 6999999999988 66788899999999999998876433
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.++.|||+.+ ++|+||+|+||+++.
T Consensus 102 ----l~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nil~~~ 140 (290)
T cd05613 102 ----FKEQEVQIYSGEIVLALEHLHKLG--IIYRDIKLENILLDS 140 (290)
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEECC
Confidence 334455888999999999999999 999999999999974
No 260
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.80 E-value=5.9e-19 Score=128.05 Aligned_cols=113 Identities=24% Similarity=0.379 Sum_probs=89.0
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|++... ........+..|+.+++.++||||+.++++|.. ....+++||||+.+++|..++..... ..
T Consensus 41 vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~--------~~ 112 (1021)
T PTZ00266 41 FCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYK--------MF 112 (1021)
T ss_pred EEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhh--------cc
Confidence 467777644 233355778899999999999999999998852 34578999999999999998865211 11
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCC-----CCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIK-----PPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~-----~~i~h~dlk~~nill~~ 121 (122)
..+++..++.++.|++.||.|||+.+ .+|+|+||||+|||++.
T Consensus 113 g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s 160 (1021)
T PTZ00266 113 GKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLST 160 (1021)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeec
Confidence 34667777999999999999999843 24999999999999853
No 261
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.80 E-value=1.5e-18 Score=110.27 Aligned_cols=105 Identities=23% Similarity=0.398 Sum_probs=86.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+... ......+.+|++++++++|++++.+++.+. .....++++||+.+++|.+++.... ..
T Consensus 31 ~~~k~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~-----------~~ 96 (256)
T cd05112 31 VAIKTIREG--AMSEEDFIEEAQVMMKLSHPKLVQLYGVCT-ERSPICLVFEFMEHGCLSDYLRAQR-----------GK 96 (256)
T ss_pred EEEEECCCC--CCCHHHHHHHHHHHHhCCCCCeeeEEEEEc-cCCceEEEEEcCCCCcHHHHHHhCc-----------cC
Confidence 467776644 223467889999999999999999999987 6677899999999999998886432 13
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.++.+||+.+ ++|+|++|+||+++.
T Consensus 97 ~~~~~~~~~~~~l~~~l~~lH~~~--i~h~dl~p~ni~i~~ 135 (256)
T cd05112 97 FSQETLLGMCLDVCEGMAYLESSN--VIHRDLAARNCLVGE 135 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--ccccccccceEEEcC
Confidence 445566899999999999999999 999999999999974
No 262
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.80 E-value=9e-19 Score=111.97 Aligned_cols=107 Identities=19% Similarity=0.222 Sum_probs=84.8
Q ss_pred CeeeeccCCC-C---CcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNL-N---LPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~-~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
||+|.+.... . ....+.+.+|+.+++++.|+||+.+++++... ...+++++||+++++|.+++.....+
T Consensus 30 v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~------ 103 (265)
T cd06652 30 LAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGAL------ 103 (265)
T ss_pred EEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCC------
Confidence 5778765331 1 12345778899999999999999999988622 35678999999999999988754333
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+...+.++.|++.++.|||+.+ ++|+||+|+||+++.
T Consensus 104 ------~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~ 141 (265)
T cd06652 104 ------TENVTRKYTRQILEGVSYLHSNM--IVHRDIKGANILRDS 141 (265)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEecC
Confidence 33444889999999999999999 999999999999874
No 263
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.80 E-value=1.2e-18 Score=111.16 Aligned_cols=105 Identities=20% Similarity=0.251 Sum_probs=85.6
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+... ....+.+.+|+.+++.++|+|++.+++.+. . ...++++||+++++|.+++..... ..
T Consensus 33 ~~iK~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~-~~~~~v~e~~~~~~L~~~~~~~~~----------~~ 98 (260)
T cd05073 33 VAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-K-EPIYIITEFMAKGSLLDFLKSDEG----------SK 98 (260)
T ss_pred EEEEecCCC--hhHHHHHHHHHHHHHhcCCCCcceEEEEEc-C-CCeEEEEEeCCCCcHHHHHHhCCc----------cc
Confidence 467766644 223567889999999999999999999987 4 667899999999999999875321 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.++.|||+.+ ++|+||+|+||+++.
T Consensus 99 ~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~ni~i~~ 137 (260)
T cd05073 99 QPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSA 137 (260)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcC
Confidence 344556889999999999999998 999999999999874
No 264
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.80 E-value=5.7e-19 Score=114.84 Aligned_cols=104 Identities=21% Similarity=0.319 Sum_probs=86.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+.... ....+.+.+|+.+++.++|||++.+++.+. .....++++||+.+++|..++.. . .
T Consensus 49 v~iK~~~~~~-~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-~~~~~~iv~e~~~~~~L~~~~~~-~------------~ 113 (297)
T cd06659 49 VAVKMMDLRK-QQRRELLFNEVVIMRDYQHQNVVEMYKSYL-VGEELWVLMEFLQGGALTDIVSQ-T------------R 113 (297)
T ss_pred EEEEEEEecc-cchHHHHHHHHHHHHhCCCCchhhhhhhee-eCCeEEEEEecCCCCCHHHHHhh-c------------C
Confidence 5788776542 234567889999999999999999999998 67788999999999999887653 1 2
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|+|+.+ ++|+|++|+||+++.
T Consensus 114 ~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dl~p~Nill~~ 152 (297)
T cd06659 114 LNEEQIATVCESVLQALCYLHSQG--VIHRDIKSDSILLTL 152 (297)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHeEEcc
Confidence 345556899999999999999999 999999999999974
No 265
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.80 E-value=9.3e-19 Score=112.80 Aligned_cols=106 Identities=30% Similarity=0.478 Sum_probs=89.1
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.+.... .....+.+.+|+.+++.++|+|++.+++.+. .....++++||+ +++|.+++.... .
T Consensus 28 ~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~~v~e~~-~~~L~~~~~~~~-----------~ 94 (286)
T cd07832 28 VALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFP-HGSGFVLVMEYM-PSDLSEVLRDEE-----------R 94 (286)
T ss_pred EEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEe-cCCeeEEEeccc-CCCHHHHHHhcC-----------C
Confidence 5778777553 2344678899999999999999999999998 678889999999 899999886532 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.++.|||+.+ ++|+||+|+||++++
T Consensus 95 ~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~~~~ 134 (286)
T cd07832 95 PLPEAQVKSYMRMLLKGVAYMHANG--IMHRDLKPANLLISA 134 (286)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCHHHEEEcC
Confidence 3555666999999999999999999 999999999999874
No 266
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.80 E-value=3.3e-19 Score=115.74 Aligned_cols=104 Identities=21% Similarity=0.324 Sum_probs=86.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+.... ....+.+.+|+..++.++|+|++.+++.+. ..+..++++||+++++|..++.. . .
T Consensus 50 vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~-~------------~ 114 (292)
T cd06658 50 VAVKKMDLRK-QQRRELLFNEVVIMRDYHHENVVDMYNSYL-VGDELWVVMEFLEGGALTDIVTH-T------------R 114 (292)
T ss_pred EEEEEEecch-HHHHHHHHHHHHHHHhCCCCcHHHHHHhee-cCCeEEEEEeCCCCCcHHHHHhc-C------------C
Confidence 4777765442 234567889999999999999999999998 67888999999999999887753 2 2
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+||+|+||++++
T Consensus 115 l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~ 153 (292)
T cd06658 115 MNEEQIATVCLSVLRALSYLHNQG--VIHRDIKSDSILLTS 153 (292)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcC
Confidence 344556899999999999999999 999999999999975
No 267
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.80 E-value=9.8e-19 Score=112.55 Aligned_cols=105 Identities=22% Similarity=0.304 Sum_probs=87.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|...........+.+.+|+.++.+++|+|++.+++.+. .....++++||+.+++|..++... .
T Consensus 32 ~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~i~~~-------------~ 97 (277)
T cd06641 32 VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLLEPG-------------P 97 (277)
T ss_pred EEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEE-eCCeEEEEEEeCCCCcHHHHHhcC-------------C
Confidence 47787665433344567888999999999999999999998 677889999999999999887531 2
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.++.+||+.+ ++|+|++|+||+++.
T Consensus 98 ~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~Ni~i~~ 136 (277)
T cd06641 98 LDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSE 136 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHccCC--eecCCCCHHhEEECC
Confidence 345566899999999999999999 999999999999874
No 268
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.80 E-value=9.5e-19 Score=111.15 Aligned_cols=106 Identities=20% Similarity=0.281 Sum_probs=87.1
Q ss_pred CeeeeccCCC----CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991 1 MCAKLLTTNL----NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76 (122)
Q Consensus 1 vavK~~~~~~----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 76 (122)
||+|.+.... .+...+.+.+|+.+++.++|+|++++++.+. +....++++||+++++|.+++.....
T Consensus 28 ~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~-------- 98 (258)
T cd06632 28 FAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER-EEDNLYIFLELVPGGSLAKLLKKYGS-------- 98 (258)
T ss_pred EEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe-cCCeEEEEEEecCCCcHHHHHHhcCC--------
Confidence 4677765432 1224467889999999999999999999988 77788999999999999999875432
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+||+|+||++++
T Consensus 99 ----~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~~~ni~~~~ 137 (258)
T cd06632 99 ----FPEPVIRLYTRQILLGLEYLHDRN--TVHRDIKGANILVDT 137 (258)
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECC
Confidence 344555889999999999999999 999999999999864
No 269
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.80 E-value=1.3e-18 Score=112.44 Aligned_cols=105 Identities=25% Similarity=0.347 Sum_probs=88.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+..... ..+.+.+|+++++.++|+|++.+++.+. .....++++||+++++|.+++.... ..
T Consensus 47 ~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~ 112 (286)
T cd06614 47 VAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYL-VGDELWVVMEYMDGGSLTDIITQNF-----------VR 112 (286)
T ss_pred EEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEE-ECCEEEEEEeccCCCcHHHHHHHhc-----------cC
Confidence 46777765422 4567889999999999999999999998 6688899999999999999998643 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 113 l~~~~~~~i~~~i~~~L~~lH~~g--i~H~dl~p~ni~i~~ 151 (286)
T cd06614 113 MNEPQIAYVCREVLQGLEYLHSQN--VIHRDIKSDNILLSK 151 (286)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCChhhEEEcC
Confidence 455566899999999999999999 999999999999874
No 270
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.80 E-value=6.6e-19 Score=112.26 Aligned_cols=106 Identities=25% Similarity=0.402 Sum_probs=88.7
Q ss_pred CeeeeccCCCC-CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLN-LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.++.... +...+.+.+|+.+++.++|+||+++++.+. +.+..++++||+.+++|.+.+.....
T Consensus 28 ~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~----------- 95 (264)
T cd06626 28 MAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV-HREKVYIFMEYCSGGTLEELLEHGRI----------- 95 (264)
T ss_pred EEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEe-cCCEEEEEEecCCCCcHHHHHhhcCC-----------
Confidence 46787776532 235678899999999999999999999987 77888999999999999998875432
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.+++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 96 -~~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~~~nil~~~ 134 (264)
T cd06626 96 -LDEHVIRVYTLQLLEGLAYLHSHG--IVHRDIKPANIFLDH 134 (264)
T ss_pred -CChHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECC
Confidence 334445889999999999999999 999999999999975
No 271
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.79 E-value=6.7e-19 Score=111.84 Aligned_cols=108 Identities=20% Similarity=0.374 Sum_probs=88.3
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|.+... ......+.+.+|+.+++.++|+|++.+++.+. .....++++||+.+++|.+++..... .
T Consensus 28 ~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~----------~ 96 (257)
T cd08225 28 CVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQ-ENGRLFIVMEYCDGGDLMKRINRQRG----------V 96 (257)
T ss_pred EEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheec-cCCeEEEEEecCCCCcHHHHHHhccC----------C
Confidence 466766543 22234567789999999999999999999988 67789999999999999998865321 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..+..++.|++.++.|||+.+ ++|+|++|+||++++
T Consensus 97 ~~~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~nil~~~ 136 (257)
T cd08225 97 LFSEDQILSWFVQISLGLKHIHDRK--ILHRDIKSQNIFLSK 136 (257)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEcC
Confidence 3455667899999999999999999 999999999999974
No 272
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.79 E-value=9.3e-19 Score=112.48 Aligned_cols=105 Identities=23% Similarity=0.378 Sum_probs=87.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCC---CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALD---HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
+|+|.+.........+.+.+|+.+++.++ |+|++.+++.+. +....++++||+.+++|.+++...
T Consensus 29 ~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~----------- 96 (277)
T cd06917 29 VALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL-KGPRLWIIMEYAEGGSVRTLMKAG----------- 96 (277)
T ss_pred EEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee-eCCEEEEEEecCCCCcHHHHHHcc-----------
Confidence 47788775544445567888999999986 999999999987 677889999999999999887642
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.++.|||+.+ ++|+||+|+||+++.
T Consensus 97 --~l~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~p~ni~i~~ 136 (277)
T cd06917 97 --PIAEKYISVIIREVLVALKYIHKVG--VIHRDIKAANILVTN 136 (277)
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHHEEEcC
Confidence 2345556899999999999999999 999999999999974
No 273
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.79 E-value=1.2e-18 Score=113.28 Aligned_cols=104 Identities=22% Similarity=0.343 Sum_probs=87.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+.... ....+.+.+|+.+++.++|+|++.+++.+. .....++++||+.+++|..++... .
T Consensus 47 v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~-------------~ 111 (296)
T cd06655 47 VAIKQINLQK-QPKKELIINEILVMKELKNPNIVNFLDSFL-VGDELFVVMEYLAGGSLTDVVTET-------------C 111 (296)
T ss_pred EEEEEEeccc-CchHHHHHHHHHHHHhcCCCceeeeeeeEe-cCceEEEEEEecCCCcHHHHHHhc-------------C
Confidence 4677776442 234567889999999999999999999998 678899999999999998887542 2
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+.++..++.|++.++.|||+.+ ++|+||+|+||+++.
T Consensus 112 l~~~~~~~i~~~l~~al~~LH~~~--i~H~dL~p~Nili~~ 150 (296)
T cd06655 112 MDEAQIAAVCRECLQALEFLHANQ--VIHRDIKSDNVLLGM 150 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECC
Confidence 445666999999999999999999 999999999999974
No 274
>KOG4236|consensus
Probab=99.79 E-value=8.8e-19 Score=119.10 Aligned_cols=107 Identities=26% Similarity=0.370 Sum_probs=85.9
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||||++.+-. ..+....+.+|+.+|+++.||+|+.+..-|+ +.+.+++|||.+.|.-|.-++.... .
T Consensus 592 VAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~E-T~ervFVVMEKl~GDMLEMILSsEk-----------g 659 (888)
T KOG4236|consen 592 VAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFE-TPERVFVVMEKLHGDMLEMILSSEK-----------G 659 (888)
T ss_pred eeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeec-CCceEEEEehhhcchHHHHHHHhhc-----------c
Confidence 7999998763 2334467789999999999999999998888 8888999999998444444444322 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+++.....++.||+.++.|||.++ |+|+||||+|+|+.+
T Consensus 660 RL~er~TkFlvtQIL~ALr~LH~kn--IvHCDLKPENVLLas 699 (888)
T KOG4236|consen 660 RLPERITKFLVTQILVALRYLHFKN--IVHCDLKPENVLLAS 699 (888)
T ss_pred cchHHHHHHHHHHHHHHHHHhhhcc--eeeccCCchheeecc
Confidence 3444444889999999999999999 999999999999975
No 275
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.79 E-value=3.8e-19 Score=114.68 Aligned_cols=106 Identities=24% Similarity=0.348 Sum_probs=86.6
Q ss_pred CeeeeccCCCC-CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLN-LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|.+..... ....+.+.+|+++++.++|+||+++++++. +.+..++++||+.++++........
T Consensus 29 ~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~------------ 95 (286)
T cd07846 29 VAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFR-RKKRLYLVFEFVDHTVLDDLEKYPN------------ 95 (286)
T ss_pred EEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcc-cCCeEEEEEecCCccHHHHHHhccC------------
Confidence 47787765422 234567789999999999999999999998 7788999999999887776554322
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.++.|||+.+ ++|+|++|+||++++
T Consensus 96 ~~~~~~~~~~~~~i~~~l~~LH~~~--i~h~~l~p~ni~~~~ 135 (286)
T cd07846 96 GLDESRVRKYLFQILRGIEFCHSHN--IIHRDIKPENILVSQ 135 (286)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECC
Confidence 2455666999999999999999999 999999999999975
No 276
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.79 E-value=1.5e-18 Score=110.67 Aligned_cols=109 Identities=22% Similarity=0.265 Sum_probs=90.4
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|++.........+.+.+|+..++.++|+|++.+++.+. .....++++|++.+++|.+++..... ...
T Consensus 29 ~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~iv~e~~~~~~l~~~~~~~~~---------~~~ 98 (267)
T cd06610 29 VAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFV-VGDELWLVMPYLSGGSLLDIMKSSYP---------RGG 98 (267)
T ss_pred EEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEe-eCCEEEEEEeccCCCcHHHHHHHhcc---------cCC
Confidence 46787765533335677889999999999999999999988 67888999999999999999875322 123
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.++.|||+.+ ++|+|++|+||++++
T Consensus 99 ~~~~~~~~~~~ql~~al~~lh~~~--i~h~~l~p~ni~~~~ 137 (267)
T cd06610 99 LDEAIIATVLKEVLKGLEYLHSNG--QIHRDIKAGNILLGE 137 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcC
Confidence 455666899999999999999999 999999999999875
No 277
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.79 E-value=8.9e-19 Score=112.48 Aligned_cols=105 Identities=23% Similarity=0.279 Sum_probs=88.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+...........+.+|+.+++.++|+|++.+.+.+. +....++++||+.+++|.+++... .
T Consensus 29 ~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~-------------~ 94 (274)
T cd06609 29 VAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFL-KGSKLWIIMEYCGGGSCLDLLKPG-------------K 94 (274)
T ss_pred EEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEE-ECCeEEEEEEeeCCCcHHHHHhhc-------------C
Confidence 46777765533444567889999999999999999999988 668899999999999999888642 3
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.++.|||+.+ ++|+|++|+||++++
T Consensus 95 ~~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~ 133 (274)
T cd06609 95 LDETYIAFILREVLLGLEYLHEEG--KIHRDIKAANILLSE 133 (274)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECC
Confidence 455666999999999999999999 999999999999875
No 278
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.79 E-value=1.1e-18 Score=119.53 Aligned_cols=91 Identities=27% Similarity=0.370 Sum_probs=78.0
Q ss_pred HHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHH
Q psy4991 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVS 95 (122)
Q Consensus 16 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 95 (122)
..+.+|++++++++|+||+.+++++. ..+..++++|++. ++|..++.... ..+.+..++.++.|++.
T Consensus 205 ~~~~~E~~iL~~L~HpnIv~l~~~~~-~~~~~~lv~e~~~-~~L~~~l~~~~-----------~~l~~~~~~~i~~qi~~ 271 (461)
T PHA03211 205 ASSVHEARLLRRLSHPAVLALLDVRV-VGGLTCLVLPKYR-SDLYTYLGARL-----------RPLGLAQVTAVARQLLS 271 (461)
T ss_pred cCHHHHHHHHHHCCCCCCCcEEEEEE-ECCEEEEEEEccC-CCHHHHHHhcC-----------CCCCHHHHHHHHHHHHH
Confidence 44678999999999999999999987 6678889999996 78888776421 24556677999999999
Q ss_pred HHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 96 ALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 96 ~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
||.|||+.+ ++||||||+|||++.
T Consensus 272 aL~yLH~~g--IvHrDLKP~NILl~~ 295 (461)
T PHA03211 272 AIDYIHGEG--IIHRDIKTENVLVNG 295 (461)
T ss_pred HHHHHHHCC--EEECcCCHHHEEECC
Confidence 999999999 999999999999975
No 279
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.79 E-value=8.8e-19 Score=116.60 Aligned_cols=104 Identities=23% Similarity=0.342 Sum_probs=81.8
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||+|.+... ........+.+|+.+++.++||||+++++++.... ...+++|||+. +++.+.+..
T Consensus 49 vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--------- 118 (359)
T cd07876 49 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIHM--------- 118 (359)
T ss_pred eEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCC-cCHHHHHhc---------
Confidence 588888754 23334567789999999999999999999986222 35789999997 566665532
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 119 -----~~~~~~~~~~~~qi~~~L~~LH~~~--ivHrDlkp~NIl~~~ 158 (359)
T cd07876 119 -----ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKS 158 (359)
T ss_pred -----cCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECC
Confidence 1334455789999999999999999 999999999999975
No 280
>KOG4278|consensus
Probab=99.79 E-value=1.7e-19 Score=124.62 Aligned_cols=106 Identities=24% Similarity=0.288 Sum_probs=91.6
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||||.++.+. -..+.|+.|+.+++.++|||++++.|+|+ ....+||+.|||..|.|.+++++... ..
T Consensus 295 vAVKtLKEDt--MeveEFLkEAAvMKeikHpNLVqLLGVCT-~EpPFYIiTEfM~yGNLLdYLRecnr----------~e 361 (1157)
T KOG4278|consen 295 VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCT-HEPPFYIITEFMCYGNLLDYLRECNR----------SE 361 (1157)
T ss_pred eehhhhhhcc--hhHHHHHHHHHHHHhhcCccHHHHhhhhc-cCCCeEEEEecccCccHHHHHHHhch----------hh
Confidence 6899998773 24689999999999999999999999998 66778999999999999999987533 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.-.++.++.||+.+|.||..++ ++||||..+|+|+.+
T Consensus 362 v~avvLlyMAtQIsSaMeYLEkkn--FIHRDLAARNCLVgE 400 (1157)
T KOG4278|consen 362 VPAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGE 400 (1157)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhh--hhhhhhhhhhccccc
Confidence 334455788999999999999999 999999999999875
No 281
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.79 E-value=3.6e-18 Score=108.62 Aligned_cols=104 Identities=20% Similarity=0.274 Sum_probs=85.1
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|..+.. ...+.+.+|+.+++.++|+|++.+++.+. . +..++++||+.+++|.+++..... ..
T Consensus 32 ~~iK~~~~~---~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~-~~~~~v~e~~~~~~L~~~l~~~~~----------~~ 96 (254)
T cd05083 32 VAVKNIKCD---VTAQAFLEETAVMTKLHHKNLVRLLGVIL-H-NGLYIVMELMSKGNLVNFLRTRGR----------AL 96 (254)
T ss_pred eEEEeecCc---chHHHHHHHHHHHHhCCCCCcCeEEEEEc-C-CCcEEEEECCCCCCHHHHHHhcCc----------CC
Confidence 467776543 23467889999999999999999999986 3 346899999999999999875321 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|+|+.+ ++|+|++|+||+++.
T Consensus 97 ~~~~~~~~~~~qi~~al~~lH~~~--~~H~dl~p~nili~~ 135 (254)
T cd05083 97 VSVIQLLQFSLDVAEGMEYLESKK--LVHRDLAARNILVSE 135 (254)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcC
Confidence 455566899999999999999999 999999999999874
No 282
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.79 E-value=7.2e-19 Score=111.05 Aligned_cols=100 Identities=20% Similarity=0.136 Sum_probs=79.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+.... ...+|...+....|||++.+++.+. +....++++||+.+|+|.+.+.....
T Consensus 21 ~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~------------ 81 (237)
T cd05576 21 FILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIV-SEDSVFLVLQHAEGGKLWSHISKFLN------------ 81 (237)
T ss_pred EEEEeecchh------hhhhHHHHHHhcCCCceeehhhhee-cCCeEEEEEecCCCCCHHHHHHHhcC------------
Confidence 4677776541 1233444455567999999999998 67889999999999999998865433
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+++..+..++.|++.|+.|+|+.+ ++|+|+||+||+++.
T Consensus 82 l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nil~~~ 120 (237)
T cd05576 82 IPEECVKRWAAEMVVALDALHREG--IVCRDLNPNNILLDD 120 (237)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcC
Confidence 445556899999999999999999 999999999999875
No 283
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.79 E-value=1.9e-18 Score=109.75 Aligned_cols=104 Identities=25% Similarity=0.401 Sum_probs=87.4
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+.... ..+.+.+|+++++.++|+|++.+++.+. +....++++||+.+++|.+++.... ..
T Consensus 31 ~~~k~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~-~~~~~~l~~e~~~~~~L~~~l~~~~-----------~~ 95 (256)
T cd06612 31 VAIKVVPVEE---DLQEIIKEISILKQCDSPYIVKYYGSYF-KNTDLWIVMEYCGAGSVSDIMKITN-----------KT 95 (256)
T ss_pred EEEEEeecHH---HHHHHHHHHHHHHhCCCCcEeeeeeeee-cCCcEEEEEecCCCCcHHHHHHhCc-----------cC
Confidence 3566665442 2578899999999999999999999998 6688999999999999999886532 24
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 96 l~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~ni~~~~ 134 (256)
T cd06612 96 LTEEEIAAILYQTLKGLEYLHSNK--KIHRDIKAGNILLNE 134 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEECC
Confidence 455666999999999999999999 999999999999874
No 284
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.79 E-value=1.5e-18 Score=113.42 Aligned_cols=111 Identities=25% Similarity=0.410 Sum_probs=85.3
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeee-eCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFE-IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.+... .....+.+|+.+++.++||||+.+++++. ......++++||+. ++|.+++........ .....
T Consensus 31 ~a~k~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~---~~~~~ 103 (317)
T cd07867 31 YALKQIEGT---GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-HDLWHIIKFHRASKA---NKKPM 103 (317)
T ss_pred EEEEEecCC---CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-CcHHHHHHhhhcccc---CCCCc
Confidence 466766543 23356789999999999999999999885 24567889999997 688888764322111 01123
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
.+++..++.++.|++.|+.|||+.+ ++|+||||+||++.
T Consensus 104 ~l~~~~~~~i~~qi~~aL~~lH~~~--ivH~Dlkp~Nil~~ 142 (317)
T cd07867 104 QLPRSMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVM 142 (317)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEc
Confidence 4677788999999999999999999 99999999999983
No 285
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.79 E-value=1.4e-18 Score=112.03 Aligned_cols=107 Identities=27% Similarity=0.436 Sum_probs=87.5
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.+.... .......+.+|++++++++|+||+++++.+. +.+..++++||+. ++|..++.... ..
T Consensus 28 ~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~-~~l~~~~~~~~----------~~ 95 (284)
T cd07860 28 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-TENKLYLVFEFLH-QDLKKFMDASP----------LS 95 (284)
T ss_pred EEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcc-cCCcEEEEeeccc-cCHHHHHHhCC----------CC
Confidence 4777776542 2334467889999999999999999999998 7778899999996 68888776432 13
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..+..++.|++.|+.|||+.+ ++|+|++|+||++++
T Consensus 96 ~l~~~~~~~~~~~i~~~l~~lh~~~--i~H~~l~p~nill~~ 135 (284)
T cd07860 96 GIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINT 135 (284)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECC
Confidence 4556677999999999999999999 999999999999975
No 286
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.79 E-value=1.8e-18 Score=110.60 Aligned_cols=107 Identities=20% Similarity=0.246 Sum_probs=85.2
Q ss_pred CeeeeccCCC----CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNL----NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
+|+|.+.... .......+.+|+.++++++|+||+.+++.+... ...+++++||+++++|.+++...+.
T Consensus 30 ~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~------- 102 (264)
T cd06653 30 LAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGA------- 102 (264)
T ss_pred EEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCC-------
Confidence 4677765321 122345778899999999999999999988622 3568899999999999988875433
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.++.|||+.+ ++|+|++|+||+++.
T Consensus 103 -----l~~~~~~~~~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~ 141 (264)
T cd06653 103 -----LTENVTRRYTRQILQGVSYLHSNM--IVHRDIKGANILRDS 141 (264)
T ss_pred -----CCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcC
Confidence 334455889999999999999999 999999999999874
No 287
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.79 E-value=2.1e-18 Score=109.22 Aligned_cols=106 Identities=26% Similarity=0.396 Sum_probs=88.4
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|.+.... .+...+.+.+|+++++.++|+|++.+.+.+. +.+..++++||+.+++|.+++.....
T Consensus 28 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~----------- 95 (254)
T cd06627 28 VAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE-TSDSLYIILEYAENGSLRQIIKKFGP----------- 95 (254)
T ss_pred EEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE-eCCEEEEEEecCCCCcHHHHHHhccC-----------
Confidence 4677776552 2235577889999999999999999999988 66888999999999999998876433
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.++.+||+.+ ++|+|++|+||+++.
T Consensus 96 -l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~ 134 (254)
T cd06627 96 -FPESLVAVYVYQVLQGLAYLHEQG--VIHRDIKAANILTTK 134 (254)
T ss_pred -CCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEECC
Confidence 344555899999999999999999 999999999999975
No 288
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.78 E-value=4e-18 Score=110.48 Aligned_cols=107 Identities=24% Similarity=0.373 Sum_probs=85.2
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.+.... .......+.+|+.++++++|+|++++++++. +....++++||++ +++.+.+..... .
T Consensus 30 ~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~~----------~ 97 (294)
T PLN00009 30 IALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVH-SEKRLYLVFEYLD-LDLKKHMDSSPD----------F 97 (294)
T ss_pred EEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEe-cCCeEEEEEeccc-ccHHHHHHhCCC----------C
Confidence 4677765432 2234466788999999999999999999998 7788999999997 688777754322 1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.|+.|||+.+ ++|+||+|+||++++
T Consensus 98 ~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dl~p~nill~~ 137 (294)
T PLN00009 98 AKNPRLIKTYLYQILRGIAYCHSHR--VLHRDLKPQNLLIDR 137 (294)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCcceEEEEC
Confidence 2344556889999999999999999 999999999999974
No 289
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=1.2e-18 Score=120.30 Aligned_cols=111 Identities=20% Similarity=0.234 Sum_probs=87.8
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-------CeEEEEEeccCCCCHHHHHHhccchhHH
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-------NSFCTVLEYCDGHDLDFYLKQHKTIAER 72 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-------~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 72 (122)
||||++... .++.....+.+|+..+..++|+|++.++..+.... ..+++++||+.+|+|.+.+.....
T Consensus 60 vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~---- 135 (496)
T PTZ00283 60 FAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAK---- 135 (496)
T ss_pred EEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhc----
Confidence 588988754 23344567788999999999999999988774121 136799999999999998875321
Q ss_pred hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
....+.+..+..++.|++.|+.|+|+.+ ++||||||+|||++.
T Consensus 136 ----~~~~l~e~~~~~i~~qll~aL~~lH~~~--IiHrDLKP~NILl~~ 178 (496)
T PTZ00283 136 ----TNRTFREHEAGLLFIQVLLAVHHVHSKH--MIHRDIKSANILLCS 178 (496)
T ss_pred ----cCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEeC
Confidence 1234566677999999999999999999 999999999999975
No 290
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.78 E-value=1.5e-18 Score=111.93 Aligned_cols=106 Identities=24% Similarity=0.290 Sum_probs=81.1
Q ss_pred CeeeeccCCCC--CcchHHHHHHHHHHhh---CCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNLN--LPFPRHALREYNIHKA---LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~~--~~~~~~~~~e~~~l~~---~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
+|+|.+..... ........+|..+++. ..|++++.+++.+. ..+..+++|||+.+++|..++...+
T Consensus 22 ~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~-------- 92 (279)
T cd05633 22 YAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFH-TPDKLCFILDLMNGGDLHYHLSQHG-------- 92 (279)
T ss_pred EEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEe-cCCeEEEEEecCCCCCHHHHHHhcC--------
Confidence 47887765421 1122334455444443 47999999999998 6678899999999999998886543
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..+..++.|++.|+.|||+.+ ++|+||||+||++++
T Consensus 93 ----~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dikp~Nil~~~ 132 (279)
T cd05633 93 ----VFSEKEMRFYATEIILGLEHMHNRF--VVYRDLKPANILLDE 132 (279)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHHCC--cCCCCCCHHHEEECC
Confidence 3455566899999999999999999 999999999999975
No 291
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.78 E-value=1.4e-18 Score=109.98 Aligned_cols=106 Identities=31% Similarity=0.404 Sum_probs=88.3
Q ss_pred CeeeeccCCCC--CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNLN--LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|.+..... ......+.+|+.++++++|+|++.+++.+. ..+..++++||+++++|.+++.....
T Consensus 21 ~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~l~~~~~---------- 89 (250)
T cd05123 21 YAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQ-TEEKLYLVLEYAPGGELFSHLSKEGR---------- 89 (250)
T ss_pred EEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHee-cCCeeEEEEecCCCCcHHHHHHhcCC----------
Confidence 46777765522 224567888999999999999999999998 77889999999999999999876433
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.++.|+|+.+ ++|+|++|+||+++.
T Consensus 90 --l~~~~~~~~~~qi~~~l~~lh~~~--~~H~~l~p~ni~~~~ 128 (250)
T cd05123 90 --FSEERARFYAAEIVLALEYLHSLG--IIYRDLKPENILLDA 128 (250)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcceEEEcC
Confidence 344555899999999999999999 999999999999875
No 292
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.78 E-value=9.7e-19 Score=112.75 Aligned_cols=106 Identities=30% Similarity=0.493 Sum_probs=86.0
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|.++... .+.....+.+|+.+++.++|+|++++++.+. +....++++||+. ++|..++.... .
T Consensus 28 ~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~-----------~ 94 (284)
T cd07839 28 VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLH-SDKKLTLVFEYCD-QDLKKYFDSCN-----------G 94 (284)
T ss_pred EEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhc-cCCceEEEEecCC-CCHHHHHHhcC-----------C
Confidence 4677776542 2334466788999999999999999999998 6778899999997 68877765421 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 95 ~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dl~~~nil~~~ 134 (284)
T cd07839 95 DIDPEIVKSFMFQLLKGLAFCHSHN--VLHRDLKPQNLLINK 134 (284)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEEcC
Confidence 3455666999999999999999999 999999999999874
No 293
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.78 E-value=1.7e-18 Score=112.14 Aligned_cols=106 Identities=29% Similarity=0.502 Sum_probs=85.7
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC--CeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA--NSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
+|+|.++... .......+.+|+.++++++||||+.+++++. .. ...++++||+. ++|..++.....
T Consensus 33 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-~~~~~~~~lv~e~~~-~~L~~~~~~~~~--------- 101 (293)
T cd07843 33 VALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVV-GSNLDKIYMVMEYVE-HDLKSLMETMKQ--------- 101 (293)
T ss_pred EEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEE-ecCCCcEEEEehhcC-cCHHHHHHhccC---------
Confidence 4677776542 2333456678999999999999999999886 34 78999999998 689888765321
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.|+.|||+.+ ++|+||+|+||++++
T Consensus 102 --~l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~ 141 (293)
T cd07843 102 --PFLQSEVKCLMLQLLSGVAHLHDNW--ILHRDLKTSNLLLNN 141 (293)
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECC
Confidence 3556666999999999999999999 999999999999975
No 294
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.78 E-value=3.2e-18 Score=110.67 Aligned_cols=104 Identities=20% Similarity=0.347 Sum_probs=85.4
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+... .....+.+.+|+.+++.++|+|++.+++.+. ..+..++++||+.+++|.+++.. ..
T Consensus 47 ~~iK~~~~~-~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~-~~------------ 111 (285)
T cd06648 47 VAVKKMDLR-KQQRRELLFNEVVIMRDYQHPNIVEMYSSYL-VGDELWVVMEFLEGGALTDIVTH-TR------------ 111 (285)
T ss_pred EEEEEEecc-chhHHHHHHHHHHHHHHcCCCChheEEEEEE-cCCeEEEEEeccCCCCHHHHHHh-CC------------
Confidence 456666433 2233466789999999999999999999987 67788999999999999988765 22
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.++.|+|+.+ ++|+||+|+||+++.
T Consensus 112 ~~~~~~~~~~~ql~~~l~~lH~~~--i~H~dl~p~Nil~~~ 150 (285)
T cd06648 112 MNEEQIATVCLAVLKALSFLHAQG--VIHRDIKSDSILLTS 150 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--eecCCCChhhEEEcC
Confidence 334455899999999999999999 999999999999875
No 295
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.78 E-value=2.4e-18 Score=110.14 Aligned_cols=107 Identities=21% Similarity=0.267 Sum_probs=84.8
Q ss_pred CeeeeccCCC----CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNL----NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
||+|.+.... .....+.+.+|+.+++.++|+||+.+++.+... ....++++||+++++|.+.+.....
T Consensus 30 ~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~------- 102 (266)
T cd06651 30 LAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGA------- 102 (266)
T ss_pred EEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCC-------
Confidence 4677665431 112345678899999999999999999988632 4678899999999999998875433
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+...+.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 103 -----l~~~~~~~~~~qi~~~l~~LH~~~--i~H~~l~p~nil~~~ 141 (266)
T cd06651 103 -----LTESVTRKYTRQILEGMSYLHSNM--IVHRDIKGANILRDS 141 (266)
T ss_pred -----CCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECC
Confidence 334455889999999999999998 999999999999875
No 296
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.78 E-value=3.2e-18 Score=110.43 Aligned_cols=109 Identities=28% Similarity=0.386 Sum_probs=85.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeee----eCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFE----IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
+|+|++... ......+.+|+.+++.+ +|+|++.+++.+. ......++++||+++++|.+++.....
T Consensus 46 ~~ik~~~~~--~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~------- 116 (286)
T cd06638 46 AAVKILDPI--HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLK------- 116 (286)
T ss_pred eEEEeeccc--cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhc-------
Confidence 466766543 22345677899999999 7999999999874 134568999999999999988763211
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
....+.+..+..++.|++.|+.|||+.+ ++|+|+||+||++++
T Consensus 117 -~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~ 159 (286)
T cd06638 117 -RGERMEEPIIAYILHEALMGLQHLHVNK--TIHRDVKGNNILLTT 159 (286)
T ss_pred -cCccccHHHHHHHHHHHHHHHHHHHhCC--ccccCCCHHhEEECC
Confidence 1234566677899999999999999999 999999999999875
No 297
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.78 E-value=1.1e-18 Score=112.52 Aligned_cols=106 Identities=24% Similarity=0.367 Sum_probs=85.7
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.++... .....+.+.+|+++++.++|+||+.+++.+. ..+..++++||+.++.+..+.....
T Consensus 29 v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~iv~e~~~~~~l~~~~~~~~------------ 95 (288)
T cd07833 29 VAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFR-RKGRLYLVFEYVERTLLELLEASPG------------ 95 (288)
T ss_pred EEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEE-ECCEEEEEEecCCCCHHHHHHhcCC------------
Confidence 4777776542 3335578899999999999999999999998 6778999999999765555443322
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.|+.|||+.+ ++|+|++|+||++++
T Consensus 96 ~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~ni~~~~ 135 (288)
T cd07833 96 GLPPDAVRSYIWQLLQAIAYCHSHN--IIHRDIKPENILVSE 135 (288)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECC
Confidence 2455566899999999999999999 999999999999874
No 298
>KOG0574|consensus
Probab=99.78 E-value=5.2e-19 Score=113.36 Aligned_cols=104 Identities=21% Similarity=0.421 Sum_probs=88.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|..+-. .+.+.+..|+.++++|+.++++++||.|. ....+|+|||||..|+..++++..+ .+
T Consensus 61 ~AIK~VPV~---sDLQEIIKEISIMQQC~S~yVVKYYGSYF-K~sDLWIVMEYCGAGSiSDI~R~R~-----------K~ 125 (502)
T KOG0574|consen 61 LAIKKVPVD---TDLQEIIKEISIMQQCKSKYVVKYYGSYF-KHSDLWIVMEYCGAGSISDIMRARR-----------KP 125 (502)
T ss_pred EEEEecCcc---chHHHHHHHHHHHHHcCCchhhhhhhhhc-cCCceEeehhhcCCCcHHHHHHHhc-----------CC
Confidence 456655533 46788999999999999999999999998 6677889999999999999998643 35
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++...+.|+.|||... -+|||+|..|||+..
T Consensus 126 L~E~EIs~iL~~TLKGL~YLH~~~--KIHRDIKAGNILLNT 164 (502)
T KOG0574|consen 126 LSEQEISAVLRDTLKGLQYLHDLK--KIHRDIKAGNILLNT 164 (502)
T ss_pred ccHHHHHHHHHHHHhHHHHHHHHH--HHHhhcccccEEEcc
Confidence 566666899999999999999988 899999999999964
No 299
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.78 E-value=1.9e-18 Score=110.17 Aligned_cols=106 Identities=25% Similarity=0.285 Sum_probs=82.0
Q ss_pred CeeeeccCCCC--CcchHHHHHHHHHHh-hCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNLN--LPFPRHALREYNIHK-ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~~--~~~~~~~~~e~~~l~-~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
||+|.++.... ......+..|..++. ..+|+|++++++.+. ..+..++++||+++++|.+++.....
T Consensus 24 vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~--------- 93 (260)
T cd05611 24 FAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ-SKDYLYLVMEYLNGGDCASLIKTLGG--------- 93 (260)
T ss_pred EEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEE-cCCeEEEEEeccCCCCHHHHHHHcCC---------
Confidence 57887765421 112233444554443 448999999999998 77889999999999999999875433
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+++..+..++.|++.|+.|+|+.+ ++|+||+|+||+++.
T Consensus 94 ---~~~~~~~~i~~qi~~aL~~lH~~~--i~H~dl~p~nil~~~ 132 (260)
T cd05611 94 ---LPEDWAKQYIAEVVLGVEDLHQRG--IIHRDIKPENLLIDQ 132 (260)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECC
Confidence 445566899999999999999999 999999999999874
No 300
>KOG0608|consensus
Probab=99.78 E-value=7e-19 Score=121.58 Aligned_cols=106 Identities=26% Similarity=0.345 Sum_probs=90.2
Q ss_pred eeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 2 CAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 2 avK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
|+|.+.+. .......+...|-.+|...+.+=||++|..|+ +.+.+|+||+|++||++..+|-.-+.+.+..+
T Consensus 658 AmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQ-DkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LA----- 731 (1034)
T KOG0608|consen 658 AMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQ-DKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLA----- 731 (1034)
T ss_pred HHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEec-cCCceEEEEeccCCccHHHHHHHhccCHHHHH-----
Confidence 56666554 12234556667888899999999999999999 88999999999999999999988777766666
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
..|+.+++.++++.|..| ++||||||.|||||.+
T Consensus 732 -------RFYIAEltcAiesVHkmG--FIHRDiKPDNILIDrd 765 (1034)
T KOG0608|consen 732 -------RFYIAELTCAIESVHKMG--FIHRDIKPDNILIDRD 765 (1034)
T ss_pred -------HHHHHHHHHHHHHHHhcc--ceecccCccceEEccC
Confidence 889999999999999999 9999999999999864
No 301
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.78 E-value=2.4e-18 Score=114.68 Aligned_cols=104 Identities=23% Similarity=0.351 Sum_probs=82.3
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||||.+.... .....+.+.+|+.+++.++|+||+.+++++... ....+++|||+. +++...+...
T Consensus 52 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-------- 122 (364)
T cd07875 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQME-------- 122 (364)
T ss_pred EEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCC-CCHHHHHHhc--------
Confidence 5788887542 334456788999999999999999999987522 235789999997 6777666431
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 123 ------~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~ 161 (364)
T cd07875 123 ------LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKS 161 (364)
T ss_pred ------CCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEECC
Confidence 234455889999999999999999 999999999999974
No 302
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.78 E-value=1.5e-18 Score=115.32 Aligned_cols=104 Identities=23% Similarity=0.350 Sum_probs=81.9
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||+|.+.... .....+.+.+|+.+++.++|+||+.+++++... ....+++|||+. +++.+.+..
T Consensus 45 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--------- 114 (355)
T cd07874 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQM--------- 114 (355)
T ss_pred EEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhc-ccHHHHHhh---------
Confidence 5788887542 233456778999999999999999999988522 235789999997 567666542
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 115 -----~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDikp~Nill~~ 154 (355)
T cd07874 115 -----ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKS 154 (355)
T ss_pred -----cCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEECC
Confidence 1334455889999999999999999 999999999999974
No 303
>KOG0577|consensus
Probab=99.78 E-value=1.6e-19 Score=123.82 Aligned_cols=106 Identities=23% Similarity=0.332 Sum_probs=88.9
Q ss_pred CeeeeccCCCCC--cchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNLNL--PFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||||.+.-..++ .-.++++.|+..|+++.|||.+.+.|||. .....|+|||||- |+-.+++.-++
T Consensus 54 VAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyL-re~TaWLVMEYCl-GSAsDlleVhk----------- 120 (948)
T KOG0577|consen 54 VAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYL-REHTAWLVMEYCL-GSASDLLEVHK----------- 120 (948)
T ss_pred eeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceee-ccchHHHHHHHHh-ccHHHHHHHHh-----------
Confidence 688888755333 24588999999999999999999999998 5566789999998 78888876532
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.++.+..+-.+.++.+.|+.|||+.+ .+|||+|..|||+++
T Consensus 121 KplqEvEIAAi~~gaL~gLaYLHS~~--~IHRDiKAGNILLse 161 (948)
T KOG0577|consen 121 KPLQEVEIAAITHGALQGLAYLHSHN--RIHRDIKAGNILLSE 161 (948)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhh--HHhhhccccceEecC
Confidence 34555666899999999999999999 999999999999975
No 304
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.78 E-value=4.6e-18 Score=108.93 Aligned_cols=107 Identities=21% Similarity=0.287 Sum_probs=86.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||+|..... ......+..|+.+++++ +|+|++++++.+... ....++++||+.+++|.+++.....
T Consensus 34 ~aik~~~~~--~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~------ 105 (272)
T cd06637 34 AAIKVMDVT--GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG------ 105 (272)
T ss_pred EEEEEEEcC--CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccC------
Confidence 467777644 23346788899999998 799999999998632 2458899999999999998875321
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..+..++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 106 ----~~l~~~~~~~~~~qi~~~l~~LH~~~--ivh~dl~~~nili~~ 146 (272)
T cd06637 106 ----NTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTE 146 (272)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHEEECC
Confidence 23556667899999999999999999 999999999999975
No 305
>PRK10345 hypothetical protein; Provisional
Probab=99.78 E-value=3.1e-18 Score=106.37 Aligned_cols=102 Identities=19% Similarity=0.277 Sum_probs=76.7
Q ss_pred eeeeccCCCCCcchHHHHHHHHHHhhC-----CCCCccceeeeeeeCCC--e-EEEEEec--cCCCCHHHHHHhccchhH
Q psy4991 2 CAKLLTTNLNLPFPRHALREYNIHKAL-----DHPRVVKLYDVFEIDAN--S-FCTVLEY--CDGHDLDFYLKQHKTIAE 71 (122)
Q Consensus 2 avK~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~--~-~~lv~e~--~~~~~L~~~l~~~~~~~~ 71 (122)
+||+..... ....+.+.+|+.+++.+ .||||+++++++.++.+ . +.+++|| +.+++|.+++... .+.
T Consensus 28 ~IKv~~~~~-~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~-~~~- 104 (210)
T PRK10345 28 CIKIVYHRG-DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC-RYE- 104 (210)
T ss_pred EEEEEeccc-cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc-ccc-
Confidence 466665442 23456789999999999 57999999999985532 3 3378999 5579999999752 211
Q ss_pred HhhhhcCCCCChHHHHHHHHHHHHHH-HHHHcCCCCeeeeCCCCCCccccc
Q psy4991 72 REARCLSQPYLSTSARSIVMQVVSAL-KYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~i~~~l-~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+. ..++.+++.++ .|||+.+ |+||||||+||++++
T Consensus 105 -----------e~--~~~~~~~L~~l~~yLh~~~--IvhrDlKp~NILl~~ 140 (210)
T PRK10345 105 -----------ED--VAQLRQLLKKLKRYLLDNR--IVTMELKPQNILCQR 140 (210)
T ss_pred -----------Hh--HHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEec
Confidence 11 34577777777 8999999 999999999999963
No 306
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.77 E-value=4.9e-18 Score=110.86 Aligned_cols=110 Identities=26% Similarity=0.401 Sum_probs=87.7
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC--CeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA--NSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 76 (122)
||+|.+.... ..+..+...+|+.++..++|||++++++.+. +. ...++++||+. +++.+.+......
T Consensus 30 ~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~~lv~e~~~-~~l~~~~~~~~~~------- 100 (316)
T cd07842 30 YAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFL-EHADKSVYLLFDYAE-HDLWQIIKFHRQA------- 100 (316)
T ss_pred EEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEe-CCCCceEEEEEeCCC-cCHHHHHHhhccC-------
Confidence 5788887642 2334577888999999999999999999997 45 67999999997 5777776542210
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
....+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 101 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~h~dlkp~Nil~~~ 143 (316)
T cd07842 101 KRVSIPPSMVKSLLWQILNGVHYLHSNW--VLHRDLKPANILVMG 143 (316)
T ss_pred CCcCcCHHHHHHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEEcC
Confidence 0124566777999999999999999999 999999999999975
No 307
>KOG0690|consensus
Probab=99.77 E-value=1.2e-19 Score=117.12 Aligned_cols=107 Identities=27% Similarity=0.402 Sum_probs=93.9
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|++++.. ..+...+.+.|-++|+.++||.+..+...|+ ..+.+|+||||..||.|.--+...+.+.+...
T Consensus 196 YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQ-t~drlCFVMeyanGGeLf~HLsrer~FsE~Rt---- 270 (516)
T KOG0690|consen 196 YAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQ-TQDRLCFVMEYANGGELFFHLSRERVFSEDRT---- 270 (516)
T ss_pred eehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhc-cCceEEEEEEEccCceEeeehhhhhcccchhh----
Confidence 5889998872 4456788899999999999999999999998 88999999999999999877776666666666
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
..+..+|+.++.|||+.+ |+.||+|.+|+|++++
T Consensus 271 --------RFYGaEIvsAL~YLHs~~--ivYRDlKLENLlLDkD 304 (516)
T KOG0690|consen 271 --------RFYGAEIVSALGYLHSRN--IVYRDLKLENLLLDKD 304 (516)
T ss_pred --------hhhhHHHHHHhhhhhhCC--eeeeechhhhheeccC
Confidence 889999999999999999 9999999999999864
No 308
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.77 E-value=3e-18 Score=114.08 Aligned_cols=89 Identities=27% Similarity=0.423 Sum_probs=76.2
Q ss_pred HHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHH
Q psy4991 18 ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSAL 97 (122)
Q Consensus 18 ~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 97 (122)
...|+.++++++|+||+++++.+. .....++++|++. ++|..++.... ..+.+..++.++.|++.|+
T Consensus 104 ~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~-----------~~~~~~~~~~i~~qi~~aL 170 (357)
T PHA03209 104 TLIEAMLLQNVNHPSVIRMKDTLV-SGAITCMVLPHYS-SDLYTYLTKRS-----------RPLPIDQALIIEKQILEGL 170 (357)
T ss_pred cHHHHHHHHhCCCCCCcChhheEE-eCCeeEEEEEccC-CcHHHHHHhcc-----------CCCCHHHHHHHHHHHHHHH
Confidence 356899999999999999999998 6677889999996 78888776421 2455666799999999999
Q ss_pred HHHHcCCCCeeeeCCCCCCccccc
Q psy4991 98 KYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 98 ~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.|||+.+ ++||||||+||+++.
T Consensus 171 ~~LH~~~--ivHrDlkp~Nill~~ 192 (357)
T PHA03209 171 RYLHAQR--IIHRDVKTENIFIND 192 (357)
T ss_pred HHHHHCC--eecCCCCHHHEEECC
Confidence 9999999 999999999999864
No 309
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.77 E-value=3.4e-18 Score=111.01 Aligned_cols=104 Identities=20% Similarity=0.323 Sum_probs=85.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+... .....+.+.+|+.+++.++|||++.+++.+. .....++++||+.+++|.+++... .
T Consensus 47 v~iK~~~~~-~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~-------------~ 111 (293)
T cd06647 47 VAIKQMNLQ-QQPKKELIINEILVMRENKHPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTET-------------C 111 (293)
T ss_pred EEEEEeccc-cchHHHHHHHHHHHHhhcCCCCeeehhheee-eCCcEEEEEecCCCCcHHHHHhhc-------------C
Confidence 467776543 2234567889999999999999999999998 667889999999999999988642 2
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 112 l~~~~~~~i~~~l~~al~~LH~~g--i~H~dL~p~Nili~~ 150 (293)
T cd06647 112 MDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGM 150 (293)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--EeeccCCHHHEEEcC
Confidence 334455889999999999999999 999999999999864
No 310
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.77 E-value=1.6e-18 Score=112.00 Aligned_cols=106 Identities=23% Similarity=0.320 Sum_probs=85.8
Q ss_pred CeeeeccCCC---CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991 1 MCAKLLTTNL---NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76 (122)
Q Consensus 1 vavK~~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 76 (122)
+|||.++... .....+.+.+|+.++.++ +|++++.+.+.+. .....++++||+.+++|...+.....
T Consensus 31 ~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~-------- 101 (288)
T cd05583 31 YAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQ-TDTKLHLILDYVNGGELFTHLYQREH-------- 101 (288)
T ss_pred EEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeee-cCCEEEEEEecCCCCcHHHHHhhcCC--------
Confidence 4677766431 122446678899999999 6999999999987 67788999999999999988865333
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.++.|||+.+ ++|+|++|+||+++.
T Consensus 102 ----~~~~~~~~~~~ql~~~l~~lH~~~--~~H~dl~p~nil~~~ 140 (288)
T cd05583 102 ----FTESEVRVYIAEIVLALDHLHQLG--IIYRDIKLENILLDS 140 (288)
T ss_pred ----cCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECC
Confidence 344455889999999999999998 999999999999974
No 311
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.77 E-value=4.7e-18 Score=115.98 Aligned_cols=105 Identities=23% Similarity=0.283 Sum_probs=79.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-------CCeEEEEEeccCCCCHHHHHHhccchhHHh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID-------ANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 73 (122)
||||.+... .....+|+.+++.++|+||+.+++++... ...++++|||++ +++..++.....
T Consensus 94 vAiK~i~~~-----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~-~~l~~~~~~~~~----- 162 (440)
T PTZ00036 94 VAIKKVLQD-----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIP-QTVHKYMKHYAR----- 162 (440)
T ss_pred EEEEEEecC-----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCC-ccHHHHHHHHhh-----
Confidence 577776543 12345799999999999999998876311 124678999998 678777653211
Q ss_pred hhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
....+++..++.++.|++.|+.|||+.+ ++||||||+|||++.
T Consensus 163 ---~~~~l~~~~~~~~~~qi~~gL~yLH~~~--IiHrDLKp~NILl~~ 205 (440)
T PTZ00036 163 ---NNHALPLFLVKLYSYQLCRALAYIHSKF--ICHRDLKPQNLLIDP 205 (440)
T ss_pred ---cCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCcCHHHEEEcC
Confidence 1234566677999999999999999999 999999999999973
No 312
>KOG0612|consensus
Probab=99.77 E-value=2.8e-19 Score=128.87 Aligned_cols=106 Identities=25% Similarity=0.290 Sum_probs=91.3
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|+++++ .+.....-|..|-.+|...+.+=|+.+..+|+ +..++|+||||++||+|..++.....+++.
T Consensus 103 YAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ-D~~~LYlVMdY~pGGDlltLlSk~~~~pE~------ 175 (1317)
T KOG0612|consen 103 YAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ-DERYLYLVMDYMPGGDLLTLLSKFDRLPED------ 175 (1317)
T ss_pred hhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc-CccceEEEEecccCchHHHHHhhcCCChHH------
Confidence 578888886 23445567778888999889999999999999 889999999999999999999875444444
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+...|+..++.|+.-+|+.| ++|||+||+|||+|.
T Consensus 176 ------~ArFY~aEiVlAldslH~mg--yVHRDiKPDNvLld~ 210 (1317)
T KOG0612|consen 176 ------WARFYTAEIVLALDSLHSMG--YVHRDIKPDNVLLDK 210 (1317)
T ss_pred ------HHHHHHHHHHHHHHHHHhcc--ceeccCCcceeEecc
Confidence 44999999999999999999 999999999999985
No 313
>KOG0579|consensus
Probab=99.77 E-value=3.9e-19 Score=123.08 Aligned_cols=104 Identities=28% Similarity=0.435 Sum_probs=88.4
Q ss_pred eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCC
Q psy4991 2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPY 81 (122)
Q Consensus 2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 81 (122)
|.|++... +....++++.|+++|..|+||+|+.++++|. -.+.++|+.|||+||....++-.- ...+
T Consensus 61 AaKvIetk-seEELEDylVEIeILa~CdHP~ivkLl~ayy-~enkLwiliEFC~GGAVDaimlEL-----------~r~L 127 (1187)
T KOG0579|consen 61 AAKVIETK-SEEELEDYLVEIEILAECDHPVIVKLLSAYY-FENKLWILIEFCGGGAVDAIMLEL-----------GRVL 127 (1187)
T ss_pred hhhhhccc-chhHHhhhhhhhhhhhcCCChHHHHHHHHHh-ccCceEEEEeecCCchHhHHHHHh-----------cccc
Confidence 34555544 2346788999999999999999999999997 567788999999999998887652 3467
Q ss_pred ChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 82 LSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 82 ~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
.++++.-+++|++.++.|||+++ |+|||||..|||++
T Consensus 128 tE~QIqvvc~q~ldALn~LHs~~--iIHRDLKAGNiL~T 164 (1187)
T KOG0579|consen 128 TEDQIQVVCYQVLDALNWLHSQN--IIHRDLKAGNILLT 164 (1187)
T ss_pred chHHHHHHHHHHHHHHHHHhhcc--hhhhhccccceEEE
Confidence 77888999999999999999999 99999999999986
No 314
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.77 E-value=4.4e-18 Score=110.53 Aligned_cols=104 Identities=20% Similarity=0.313 Sum_probs=85.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|.+... .......+.+|+.+++.++|+|++.+++.+. ..+..++++||+++++|.+++.. + .
T Consensus 48 v~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~-~------------~ 112 (292)
T cd06657 48 VAVKKMDLR-KQQRRELLFNEVVIMRDYQHENVVEMYNSYL-VGDELWVVMEFLEGGALTDIVTH-T------------R 112 (292)
T ss_pred EEEEEeccc-chhHHHHHHHHHHHHHhcCCcchhheeeEEE-eCCEEEEEEecCCCCcHHHHHhc-C------------C
Confidence 467766543 2234566889999999999999999999998 67888999999999999887653 2 2
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.++.|+|+.+ ++|+|++|+||++++
T Consensus 113 ~~~~~~~~~~~ql~~~l~~lH~~g--ivH~dl~p~Nilv~~ 151 (292)
T cd06657 113 MNEEQIAAVCLAVLKALSVLHAQG--VIHRDIKSDSILLTH 151 (292)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECC
Confidence 344556899999999999999999 999999999999975
No 315
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.77 E-value=9.1e-18 Score=107.62 Aligned_cols=113 Identities=21% Similarity=0.250 Sum_probs=86.5
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||+|.+.... .....+.+.+|+.+++.++|||++.+++.+.... ...+++++|+.+|+|..++......
T Consensus 30 ~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----- 104 (273)
T cd05074 30 VAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIG----- 104 (273)
T ss_pred EEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhccc-----
Confidence 4788877653 2334567889999999999999999999885221 1246888999999998887532210
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.....+++..++.++.|++.|+.|||+.+ ++|+|+||+||+++.
T Consensus 105 -~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~nili~~ 148 (273)
T cd05074 105 -EEPFTLPLQTLVRFMIDIASGMEYLSSKN--FIHRDLAARNCMLNE 148 (273)
T ss_pred -CCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccchhhEEEcC
Confidence 01124566777999999999999999999 999999999999974
No 316
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.77 E-value=2.8e-18 Score=113.54 Aligned_cols=105 Identities=28% Similarity=0.407 Sum_probs=82.8
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||||.+.... .....+.+.+|+.+++.++|+||+++++++... ....+++++++ +++|..++.. .
T Consensus 43 vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~-~------- 113 (343)
T cd07878 43 VAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKC-Q------- 113 (343)
T ss_pred EEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhc-C-------
Confidence 5788887542 222345677899999999999999999988522 13478899988 5888877653 2
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..+..++.|++.|+.|||+.+ ++||||||+||+++.
T Consensus 114 -----~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrdikp~Nil~~~ 153 (343)
T cd07878 114 -----KLSDEHVQFLIYQLLRGLKYIHSAG--IIHRDLKPSNVAVNE 153 (343)
T ss_pred -----CCCHHHHHHHHHHHHHHHHHHHHCC--eecccCChhhEEECC
Confidence 3455566899999999999999999 999999999999975
No 317
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.77 E-value=1.8e-18 Score=110.99 Aligned_cols=106 Identities=27% Similarity=0.403 Sum_probs=87.9
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
||+|+..... .....+.+.+|..+++++. |+||+++++.+. +.+..+++||++.+++|.+++...+
T Consensus 29 ~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~---------- 97 (280)
T cd05581 29 YAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ-DEENLYFVLEYAPNGELLQYIRKYG---------- 97 (280)
T ss_pred EEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhc-CCceEEEEEcCCCCCcHHHHHHHcC----------
Confidence 4677776531 2233466788999999998 999999999998 7778999999999999999987643
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.|+.+||+.+ ++|+|++|+||+++.
T Consensus 98 --~l~~~~~~~i~~ql~~~l~~Lh~~~--~~H~dl~~~ni~i~~ 137 (280)
T cd05581 98 --SLDEKCTRFYAAEILLALEYLHSKG--IIHRDLKPENILLDK 137 (280)
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECC
Confidence 3445556999999999999999999 999999999999874
No 318
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.77 E-value=6.1e-18 Score=108.93 Aligned_cols=109 Identities=25% Similarity=0.354 Sum_probs=85.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHH-HhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~-l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.++..........+..|... ++..+|+|++++++.+. ..+..++++||++ |+|.+++..... ...
T Consensus 29 vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~~--------~~~ 98 (283)
T cd06617 29 MAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALF-REGDVWICMEVMD-TSLDKFYKKVYD--------KGL 98 (283)
T ss_pred EEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEe-cCCcEEEEhhhhc-ccHHHHHHHhcc--------CCC
Confidence 578888765433334556667665 55568999999999998 6677899999997 788888765321 113
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.|+.|||+. + ++|+|+||+||++++
T Consensus 99 ~~~~~~~~~~~~qi~~~l~~lH~~~~--i~h~dlkp~nil~~~ 139 (283)
T cd06617 99 TIPEDILGKIAVSIVKALEYLHSKLS--VIHRDVKPSNVLINR 139 (283)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECC
Confidence 566777899999999999999986 7 999999999999974
No 319
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.76 E-value=5.9e-18 Score=107.72 Aligned_cols=111 Identities=25% Similarity=0.353 Sum_probs=88.4
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|.+... ......+.+..|+.+++.++|+|++.+++.+.. .....++++||+++++|..++..... ..
T Consensus 28 ~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~--------~~ 99 (265)
T cd08217 28 LVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKK--------ER 99 (265)
T ss_pred EEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhh--------cc
Confidence 467777654 233345678889999999999999999998752 34568899999999999999875321 12
Q ss_pred CCCChHHHHHHHHHHHHHHHHHH-----cCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLN-----EIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh-----~~~~~i~h~dlk~~nill~~ 121 (122)
.++.+..++.++.|++.|+.|+| +.+ ++|+|++|+||+++.
T Consensus 100 ~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~--i~h~dl~p~nili~~ 145 (265)
T cd08217 100 KYIEEEFIWRILTQLLLALYECHNRSDPGNT--VLHRDLKPANIFLDA 145 (265)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhcCccccCc--ceecCCCHHHEEEec
Confidence 34566777999999999999999 777 999999999999974
No 320
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.76 E-value=1.1e-17 Score=106.12 Aligned_cols=110 Identities=32% Similarity=0.532 Sum_probs=90.3
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.+.... .....+.+.+|+++++.++|+|++.+.+.+. .....++++||+++++|...+..... ...
T Consensus 28 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~--------~~~ 98 (258)
T cd08215 28 YVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFE-EKGKLCIVMEYADGGDLSQKIKKQKK--------EGK 98 (258)
T ss_pred EEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEe-cCCEEEEEEEecCCCcHHHHHHHhhc--------cCC
Confidence 4677776542 2245567889999999999999999999998 66889999999999999998876321 113
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..+..++.+++.|+.+||+.+ ++|+|++|+||+++.
T Consensus 99 ~~~~~~~~~i~~~i~~~l~~lh~~~--~~H~dl~~~nil~~~ 138 (258)
T cd08215 99 PFPEEQILDWFVQLCLALKYLHSRK--ILHRDIKPQNIFLTS 138 (258)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHHeEEcC
Confidence 4566677999999999999999999 999999999999975
No 321
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.76 E-value=4.9e-18 Score=109.44 Aligned_cols=107 Identities=28% Similarity=0.447 Sum_probs=88.3
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|++.... ..+....+.+|+++++.++|+|++++++.+. +.+..++++||++ ++|.+++..... .
T Consensus 27 ~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~-~~~~~~iv~e~~~-~~l~~~~~~~~~----------~ 94 (283)
T cd07835 27 VALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH-SENKLYLVFEFLD-LDLKKYMDSSPL----------T 94 (283)
T ss_pred EEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec-cCCeEEEEEeccC-cCHHHHHhhCCC----------C
Confidence 4778776552 2334467889999999999999999999998 6788999999996 789888865331 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.++.|||+.+ ++|+|++|+||++++
T Consensus 95 ~~~~~~~~~~~~~i~~~L~~lH~~~--~~H~dl~p~nil~~~ 134 (283)
T cd07835 95 GLDPPLIKSYLYQLLQGIAYCHSHR--VLHRDLKPQNLLIDR 134 (283)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcC
Confidence 4556677999999999999999998 999999999999874
No 322
>KOG0614|consensus
Probab=99.76 E-value=5.7e-20 Score=123.99 Aligned_cols=106 Identities=27% Similarity=0.391 Sum_probs=94.8
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|++++. .+.+..++...|-++|..++.|.||++|..|. +.+.+||+||-|-||.++..++..+.+....+
T Consensus 448 fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfr-d~kyvYmLmEaClGGElWTiLrdRg~Fdd~ta---- 522 (732)
T KOG0614|consen 448 FALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFR-DSKYVYMLMEACLGGELWTILRDRGSFDDYTA---- 522 (732)
T ss_pred HHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhc-cchhhhhhHHhhcCchhhhhhhhcCCcccchh----
Confidence 467777765 34556688889999999999999999999998 88899999999999999999999888777777
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..++.++++|..|||+++ |+.|||||+|++++.
T Consensus 523 --------rF~~acv~EAfeYLH~k~--iIYRDLKPENllLd~ 555 (732)
T KOG0614|consen 523 --------RFYVACVLEAFEYLHRKG--IIYRDLKPENLLLDN 555 (732)
T ss_pred --------hhhHHHHHHHHHHHHhcC--ceeccCChhheeecc
Confidence 889999999999999999 999999999999985
No 323
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.76 E-value=8.8e-18 Score=108.48 Aligned_cols=108 Identities=27% Similarity=0.418 Sum_probs=82.5
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhC---CCCCccceeeeeeeC----CCeEEEEEeccCCCCHHHHHHhccchhHH
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKAL---DHPRVVKLYDVFEID----ANSFCTVLEYCDGHDLDFYLKQHKTIAER 72 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~---~h~~i~~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 72 (122)
||+|.++... .........+|+.+++.+ +|+||+++++++... ....++++|++. ++|..++.....
T Consensus 28 ~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~---- 102 (288)
T cd07863 28 VALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVD-QDLRTYLDKVPP---- 102 (288)
T ss_pred EEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccc-cCHHHHHHhcCC----
Confidence 5788877542 222345566777777665 799999999988521 345789999998 688888764211
Q ss_pred hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+++..+..++.|++.|+.|+|+.+ ++|+|+||+||+++.
T Consensus 103 ------~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~ 143 (288)
T cd07863 103 ------PGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTS 143 (288)
T ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECC
Confidence 23566777999999999999999999 999999999999974
No 324
>KOG4645|consensus
Probab=99.76 E-value=2.8e-19 Score=130.23 Aligned_cols=106 Identities=25% Similarity=0.431 Sum_probs=87.5
Q ss_pred eeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 2 CAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 2 avK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
|||-++-. ...+....+.+|..++..++|||++++||+-. ..+..+|.||||.+|+|.+.+...+...+.-.
T Consensus 1264 AvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEv-HRekv~IFMEyC~~GsLa~ll~~gri~dE~vt------ 1336 (1509)
T KOG4645|consen 1264 AVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEV-HREKVYIFMEYCEGGSLASLLEHGRIEDEMVT------ 1336 (1509)
T ss_pred hhhhhhcCccccccCcchHHHHHHHHhccCccccccCceee-cHHHHHHHHHHhccCcHHHHHHhcchhhhhHH------
Confidence 56665543 22344566778999999999999999999987 55677899999999999999987655555444
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
.-+..|++.|+.|||+.| |+|||+||+||+|+.+
T Consensus 1337 ------~vyt~qll~gla~LH~~g--IVHRDIK~aNI~Ld~~ 1370 (1509)
T KOG4645|consen 1337 ------RVYTKQLLEGLAYLHEHG--IVHRDIKPANILLDFN 1370 (1509)
T ss_pred ------HHHHHHHHHHHHHHHhcC--ceecCCCccceeeecC
Confidence 678999999999999999 9999999999999853
No 325
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.76 E-value=1.5e-17 Score=107.73 Aligned_cols=109 Identities=27% Similarity=0.366 Sum_probs=85.5
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCC----CeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDA----NSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
+|+|.+... ......+.+|+.+++++ +|+|++.+++.+.... ...++++||+.+++|.+++.....
T Consensus 50 ~aik~~~~~--~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~------- 120 (291)
T cd06639 50 AAVKILDPI--SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLI------- 120 (291)
T ss_pred EEEEEeccc--ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhh-------
Confidence 366766543 22346677899999998 8999999999986322 358899999999999988764211
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
....+.+..++.++.|++.|+.|||+.+ ++|+||||+||++++
T Consensus 121 -~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~nili~~ 163 (291)
T cd06639 121 -CGQRLDEAMISYILYGALLGLQHLHNNR--IIHRDVKGNNILLTT 163 (291)
T ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcC
Confidence 1234566777999999999999999999 999999999999974
No 326
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.76 E-value=1.2e-17 Score=105.46 Aligned_cols=106 Identities=24% Similarity=0.426 Sum_probs=88.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+++|.+..... ...+.+.+|++.++.++|++++.+.+.+. .....++++||+++++|.+++.... ..
T Consensus 28 ~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~l~~e~~~~~~L~~~~~~~~-----------~~ 94 (253)
T cd05122 28 VAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYL-KKDELWIVMEFCSGGSLKDLLKSTN-----------QT 94 (253)
T ss_pred EEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEe-cCCeEEEEEecCCCCcHHHHHhhcC-----------CC
Confidence 46677765532 35678889999999999999999999998 6678889999999999999887532 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.++.+||+.+ ++|+|++|+||+++.
T Consensus 95 ~~~~~~~~i~~~i~~~l~~lh~~~--i~h~dl~p~ni~i~~ 133 (253)
T cd05122 95 LTESQIAYVCKELLKGLEYLHSNG--IIHRDIKAANILLTS 133 (253)
T ss_pred CCHHHHHHHHHHHHHHHHHhhcCC--EecCCCCHHHEEEcc
Confidence 455666899999999999999998 999999999999974
No 327
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.76 E-value=8.5e-18 Score=108.39 Aligned_cols=106 Identities=23% Similarity=0.262 Sum_probs=80.5
Q ss_pred CeeeeccCCCCC--cchHHHHHHHH---HHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNLNL--PFPRHALREYN---IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~~~--~~~~~~~~e~~---~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
||+|.+...... .....+..|.. .++...|++++.+.+.+. +.+..++++||+.+++|..++...+
T Consensus 22 vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~v~e~~~g~~L~~~l~~~~-------- 92 (278)
T cd05606 22 YAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH-TPDKLSFILDLMNGGDLHYHLSQHG-------- 92 (278)
T ss_pred EEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeee-cCCEEEEEEecCCCCcHHHHHHhcC--------
Confidence 578877654211 11122333433 344457999999999998 6778999999999999988876533
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..+..++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 93 ----~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~nili~~ 132 (278)
T cd05606 93 ----VFSEAEMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDE 132 (278)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHHCC--EEcCCCCHHHEEECC
Confidence 3455566999999999999999999 999999999999864
No 328
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.76 E-value=3.2e-18 Score=112.93 Aligned_cols=106 Identities=23% Similarity=0.416 Sum_probs=85.0
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeee---CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 76 (122)
||+|.+.... .......+.+|+.+++.++|+||+++++++.. .....++++||+. ++|.+++.....
T Consensus 33 valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~-------- 103 (334)
T cd07855 33 VAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHSDQP-------- 103 (334)
T ss_pred EEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhccCCC--------
Confidence 5788877652 23345677889999999999999999988752 2356889999996 688888765333
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+|+||+||++++
T Consensus 104 ----~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~ 142 (334)
T cd07855 104 ----LTEEHIRYFLYQLLRGLKYIHSAN--VIHRDLKPSNLLVNE 142 (334)
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcC
Confidence 344555999999999999999999 999999999999975
No 329
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.76 E-value=1.4e-17 Score=108.74 Aligned_cols=107 Identities=29% Similarity=0.474 Sum_probs=85.3
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|.+.... ..+......+|+.++++++|+|++++++.+... .+..++++||+. ++|.+++....
T Consensus 35 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~----------- 102 (309)
T cd07845 35 VALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE-QDLASLLDNMP----------- 102 (309)
T ss_pred EEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC-CCHHHHHHhcc-----------
Confidence 5788876542 223344567899999999999999999998633 256889999997 68888776421
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..++.++.|++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 103 ~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~ 143 (309)
T cd07845 103 TPFSESQVKCLMLQLLRGLQYLHENF--IIHRDLKVSNLLLTD 143 (309)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECC
Confidence 24566677999999999999999999 999999999999975
No 330
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.76 E-value=8.7e-18 Score=110.81 Aligned_cols=89 Identities=21% Similarity=0.392 Sum_probs=77.4
Q ss_pred HHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHH
Q psy4991 17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSA 96 (122)
Q Consensus 17 ~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 96 (122)
.+.+|+.+++.++|+||+.+++.+. ..+..++++||+. ++|.+++..... +.+.....++.|++.|
T Consensus 66 ~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~~------------~~~~~~~~~~~ql~~a 131 (335)
T PTZ00024 66 TTLRELKIMNEIKHENIMGLVDVYV-EGDFINLVMDIMA-SDLKKVVDRKIR------------LTESQVKCILLQILNG 131 (335)
T ss_pred hHHHHHHHHHhCCCcceeeeeEEEe-cCCcEEEEEeccc-cCHHHHHHhcCC------------CCHHHHHHHHHHHHHH
Confidence 5778999999999999999999998 6778999999997 789888865333 3445558999999999
Q ss_pred HHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 97 LKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 97 l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.|||+.+ ++|+||+|+||+++.
T Consensus 132 L~~LH~~~--i~H~dl~~~nill~~ 154 (335)
T PTZ00024 132 LNVLHKWY--FMHRDLSPANIFINS 154 (335)
T ss_pred HHHHHhCC--eecccccHHHeEECC
Confidence 99999999 999999999999874
No 331
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.75 E-value=7.2e-18 Score=110.05 Aligned_cols=106 Identities=22% Similarity=0.322 Sum_probs=85.1
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|.+.... .....+.+.+|+.+++.++|||++++.+.+. +....++++||+. |++.+++....
T Consensus 43 v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~-g~l~~~~~~~~----------- 109 (307)
T cd06607 43 VAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYL-REHTAWLVMEYCL-GSASDILEVHK----------- 109 (307)
T ss_pred EEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEE-eCCeEEEEHHhhC-CCHHHHHHHcc-----------
Confidence 4677775432 2223456889999999999999999999998 6777889999997 67777665321
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..+..++.|++.|+.|||+.+ ++|+|++|+||++++
T Consensus 110 ~~l~~~~~~~~~~ql~~~L~~LH~~~--i~H~dl~p~nIl~~~ 150 (307)
T cd06607 110 KPLQEVEIAAICHGALQGLAYLHSHE--RIHRDIKAGNILLTE 150 (307)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEECC
Confidence 23456666899999999999999999 999999999999975
No 332
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.75 E-value=6.7e-18 Score=107.14 Aligned_cols=110 Identities=25% Similarity=0.387 Sum_probs=89.8
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|.+... ........+.+|+.+++.++|+||+.+.+.+. .....++++||+++++|..++..... ...
T Consensus 28 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~--------~~~ 98 (256)
T cd08530 28 YALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFL-DGNKLCIVMEYAPFGDLSKAISKRKK--------KRK 98 (256)
T ss_pred EEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhc-cCCEEEEEehhcCCCCHHHHHHHHHh--------hcC
Confidence 467776653 23344567788999999999999999999998 66889999999999999998865211 123
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 99 ~~~~~~~~~~~~~l~~al~~lh~~~--i~h~~l~~~ni~~~~ 138 (256)
T cd08530 99 LIPEQEIWRIFIQLLRGLQALHEQK--ILHRDLKSANILLVA 138 (256)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEEec
Confidence 4566777999999999999999999 999999999999874
No 333
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.75 E-value=1.1e-17 Score=111.24 Aligned_cols=104 Identities=23% Similarity=0.349 Sum_probs=82.3
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||+|.+... .+......+.+|+.++++++|+|++++++++.... ...++++||+. ++|.+.+...
T Consensus 44 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-------- 114 (353)
T cd07850 44 VAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMD-------- 114 (353)
T ss_pred EEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccC-CCHHHHHhhc--------
Confidence 578887654 23334567788999999999999999999885222 35789999997 6887776532
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+....+..++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 115 ------l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nil~~~ 153 (353)
T cd07850 115 ------LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKS 153 (353)
T ss_pred ------CCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECC
Confidence 233445889999999999999999 999999999999975
No 334
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.75 E-value=1.2e-17 Score=105.85 Aligned_cols=106 Identities=26% Similarity=0.340 Sum_probs=87.9
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC--CeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA--NSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
|++|.+.... .+...+.+.+|+.++++++|+|++.+++.+. .. ...++++||+.+++|.+++....
T Consensus 28 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~~lv~e~~~~~~L~~~~~~~~---------- 96 (260)
T cd06606 28 MAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSER-DEEKNTLNIFLEYVSGGSLSSLLKKFG---------- 96 (260)
T ss_pred EEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEe-cCCCCeEEEEEEecCCCcHHHHHHHcC----------
Confidence 4667766542 1234677889999999999999999999997 55 77889999999999999987643
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.++.|||+.+ ++|+|++|+||+++.
T Consensus 97 --~~~~~~~~~~~~~l~~~l~~lh~~~--~~h~dl~p~ni~i~~ 136 (260)
T cd06606 97 --KLPEPVIRKYTRQILEGLAYLHSNG--IVHRDIKGANILVDS 136 (260)
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEcC
Confidence 3445556899999999999999999 999999999999975
No 335
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.75 E-value=1.6e-17 Score=108.93 Aligned_cols=106 Identities=21% Similarity=0.330 Sum_probs=85.5
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|.+.... .......+.+|+++++.++|+|++.+++++. +....++++||+. |++.+.+....
T Consensus 53 valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~-g~l~~~~~~~~----------- 119 (317)
T cd06635 53 VAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYL-REHTAWLVMEYCL-GSASDLLEVHK----------- 119 (317)
T ss_pred EEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-eCCeEEEEEeCCC-CCHHHHHHHhc-----------
Confidence 4778776442 2233457889999999999999999999998 6677889999997 67777665321
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+.++..++.|++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 120 ~~l~~~~~~~i~~~i~~~l~~lH~~~--i~H~dL~p~Nil~~~ 160 (317)
T cd06635 120 KPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTE 160 (317)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcccEEECC
Confidence 23556677899999999999999999 999999999999874
No 336
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.75 E-value=1e-17 Score=107.82 Aligned_cols=106 Identities=24% Similarity=0.357 Sum_probs=83.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCC--CeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDA--NSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
+|+|.++............+|+..+.++ +|+|++.+++.+. +. +..++++||+. +++.+.+....
T Consensus 27 ~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~-~~~~~~~~lv~e~~~-~~l~~~l~~~~---------- 94 (282)
T cd07831 27 YAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLF-DRKTGRLALVFELMD-MNLYELIKGRK---------- 94 (282)
T ss_pred EEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEe-cCCCCcEEEEEecCC-ccHHHHHHhcc----------
Confidence 4788877653333334456788889888 5999999999987 44 67899999997 68877776422
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 95 -~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~p~ni~l~~ 135 (282)
T cd07831 95 -RPLPEKRVKSYMYQLLKSLDHMHRNG--IFHRDIKPENILIKD 135 (282)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEcC
Confidence 23556667999999999999999999 999999999999874
No 337
>KOG0200|consensus
Probab=99.75 E-value=9e-18 Score=118.30 Aligned_cols=119 Identities=20% Similarity=0.356 Sum_probs=98.6
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccch-hHHhh-hhc
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI-AEREA-RCL 77 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~-~~~ 77 (122)
||||.++........+.+..|+.++..+ .|+|++.+.|+|+ ..+.++++.||+..|+|..+++..+.. ..... ...
T Consensus 331 VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t-~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~ 409 (609)
T KOG0200|consen 331 VAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACT-QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFP 409 (609)
T ss_pred EEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeec-cCCceEEEEEeccCCcHHHHHHhccccccccccCCCc
Confidence 6899999886667789999999999999 7999999999998 577888999999999999999987611 00000 001
Q ss_pred C--CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 78 S--QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 78 ~--~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
. ..+....++.++.||+.||.||.+.. ++||||..+|||+.++
T Consensus 410 ~~~~~L~~~dLlsfa~QIa~GMe~L~~~~--~vHRDLAaRNVLi~~~ 454 (609)
T KOG0200|consen 410 NERDALTTKDLLSFAYQIANGMEYLASVP--CVHRDLAARNVLITKN 454 (609)
T ss_pred cccCCcCHHHHHHHHHHHHHHHHHHhhCC--ccchhhhhhhEEecCC
Confidence 1 23777888999999999999999998 9999999999999753
No 338
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.75 E-value=1.3e-17 Score=106.77 Aligned_cols=109 Identities=24% Similarity=0.362 Sum_probs=86.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
+|+|++.... ...+.+.+|+.+++++ +|+|++++++.+... ....++++||+.+++|.+++.....
T Consensus 34 ~~~k~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~------ 105 (275)
T cd06608 34 VAIKIMDIIE--DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRK------ 105 (275)
T ss_pred EEEEEEecCc--hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhh------
Confidence 4667666442 2346788999999999 799999999998622 3458899999999999888764220
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
....+.+..+..++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 106 --~~~~~~~~~~~~~~~ql~~al~~lH~~~--i~H~~l~p~ni~~~~ 148 (275)
T cd06608 106 --KGKRLKEEWIAYILRETLRGLAYLHENK--VIHRDIKGQNILLTK 148 (275)
T ss_pred --cCCCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEEcc
Confidence 1134566677999999999999999999 999999999999974
No 339
>PTZ00284 protein kinase; Provisional
Probab=99.75 E-value=9.7e-18 Score=115.12 Aligned_cols=104 Identities=21% Similarity=0.351 Sum_probs=78.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCC------CCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDH------PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||||+++.. .........|+.+++.++| .+++.+++++.......|+++|++ +++|.+++...+.
T Consensus 157 vAvK~i~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~------ 227 (467)
T PTZ00284 157 CAVKIVRNV--PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHGP------ 227 (467)
T ss_pred EEEEEEecc--hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcCC------
Confidence 688988643 2233455667777777654 457888888875566789999998 4788888765433
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+ .+ |+||||||+|||++.
T Consensus 228 ------l~~~~~~~i~~qi~~aL~yLH~~~g--IiHrDlKP~NILl~~ 267 (467)
T PTZ00284 228 ------FSHRHLAQIIFQTGVALDYFHTELH--LMHTDLKPENILMET 267 (467)
T ss_pred ------CCHHHHHHHHHHHHHHHHHHHhcCC--eecCCCCHHHEEEec
Confidence 4445558999999999999998 48 999999999999964
No 340
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.75 E-value=1.4e-17 Score=108.42 Aligned_cols=107 Identities=27% Similarity=0.463 Sum_probs=83.4
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-------CCeEEEEEeccCCCCHHHHHHhccchhHH
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-------ANSFCTVLEYCDGHDLDFYLKQHKTIAER 72 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 72 (122)
||+|.+.... .......+.+|+.++++++||||+++++.+... ....++++||+. +++...+....
T Consensus 40 ~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~----- 113 (310)
T cd07865 40 VALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSNKN----- 113 (310)
T ss_pred EEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCC-cCHHHHHHhcc-----
Confidence 5778776442 233345667899999999999999999988522 134689999997 68877765421
Q ss_pred hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..++.++.|++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 114 ------~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dl~p~nil~~~ 154 (310)
T cd07865 114 ------VKFTLSEIKKVMKMLLNGLYYIHRNK--ILHRDMKAANILITK 154 (310)
T ss_pred ------cCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEECC
Confidence 23556677999999999999999999 999999999999874
No 341
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.75 E-value=1e-17 Score=107.83 Aligned_cols=106 Identities=26% Similarity=0.446 Sum_probs=87.5
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC--CeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA--NSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
+|+|.+.... ..+..+.+.+|+.+++.++|+|++.+++.+. .. +..++++||++ ++|..++....
T Consensus 27 ~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~~lv~e~~~-~~l~~~~~~~~---------- 94 (287)
T cd07840 27 VALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVT-SKGKGSIYMVFEYMD-HDLTGLLDSPE---------- 94 (287)
T ss_pred EEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEe-cCCCCcEEEEecccc-ccHHHHHhccC----------
Confidence 4788887663 3445577889999999999999999999997 44 78999999997 58887776431
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..++.++.|++.|+.|||+.+ ++|+|++|+||++++
T Consensus 95 -~~~~~~~~~~i~~~i~~al~~LH~~~--~~h~dl~p~nil~~~ 135 (287)
T cd07840 95 -VKFTESQIKCYMKQLLEGLQYLHSNG--ILHRDIKGSNILINN 135 (287)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEEcC
Confidence 23455666999999999999999999 999999999999975
No 342
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.75 E-value=9.8e-18 Score=123.24 Aligned_cols=100 Identities=23% Similarity=0.310 Sum_probs=80.0
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||||.+..... ....|++.+++++||||+++++++. +....++||||+++|+|.+++..
T Consensus 718 vavK~~~~~~~-----~~~~~~~~l~~l~HpnIv~~~~~~~-~~~~~~lv~Ey~~~g~L~~~l~~--------------- 776 (968)
T PLN00113 718 FVVKEINDVNS-----IPSSEIADMGKLQHPNIVKLIGLCR-SEKGAYLIHEYIEGKNLSEVLRN--------------- 776 (968)
T ss_pred EEEEEccCCcc-----ccHHHHHHHhhCCCCCcceEEEEEE-cCCCCEEEEeCCCCCcHHHHHhc---------------
Confidence 57887764421 1234688899999999999999998 66778899999999999998852
Q ss_pred CChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|+|.. .++++|||+||+||+++.
T Consensus 777 l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~ 818 (968)
T PLN00113 777 LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG 818 (968)
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC
Confidence 33455588999999999999943 233999999999999874
No 343
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.75 E-value=1.2e-17 Score=110.34 Aligned_cols=105 Identities=25% Similarity=0.384 Sum_probs=83.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC----CCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 76 (122)
||+|.+..........++.+|+.+++.++|+||+.+++.+... ....++++||+. +++.+.+..
T Consensus 33 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----------- 100 (336)
T cd07849 33 VAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELME-TDLYKLIKT----------- 100 (336)
T ss_pred EEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhcc-cCHHHHHhc-----------
Confidence 5788876543344556788899999999999999999887522 235789999997 688776653
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 101 --~~l~~~~~~~i~~ql~~aL~~LH~~~--ivH~dlkp~Nill~~ 141 (336)
T cd07849 101 --QHLSNDHIQYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNT 141 (336)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECC
Confidence 23455566899999999999999999 999999999999875
No 344
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.74 E-value=1.9e-17 Score=106.73 Aligned_cols=107 Identities=21% Similarity=0.271 Sum_probs=85.0
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeee-----CCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEI-----DANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
+|+|..... ......+..|+.+++++ +|+|++++++.+.. .....+++|||+.+|+|..++.....
T Consensus 44 ~a~K~~~~~--~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~------ 115 (282)
T cd06636 44 AAIKVMDVT--EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG------ 115 (282)
T ss_pred EEEEEEecC--hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccC------
Confidence 467766543 22345678899999998 79999999999852 24578899999999999998875322
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..++.++.|++.++.|||+.+ ++|+|++|+||+++.
T Consensus 116 ----~~~~~~~~~~~~~qi~~al~~LH~~~--ivH~dl~~~nili~~ 156 (282)
T cd06636 116 ----NALKEDWIAYICREILRGLAHLHAHK--VIHRDIKGQNVLLTE 156 (282)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECC
Confidence 23455666889999999999999999 999999999999974
No 345
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.74 E-value=2.5e-17 Score=108.56 Aligned_cols=105 Identities=25% Similarity=0.357 Sum_probs=84.0
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.+... ......+.+.+|+.+++.++|||++++.+++.......++++||+. ++|..++...
T Consensus 38 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~------------- 103 (328)
T cd07856 38 VAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELLG-TDLHRLLTSR------------- 103 (328)
T ss_pred EEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehhc-cCHHHHHhcC-------------
Confidence 477877653 2333457788999999999999999999998744567889999995 7888777532
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..+..++.|++.|+.|||+.+ ++|+|++|+||++++
T Consensus 104 ~~~~~~~~~~~~ql~~aL~~LH~~~--iiH~dl~p~Nili~~ 143 (328)
T cd07856 104 PLEKQFIQYFLYQILRGLKYVHSAG--VVHRDLKPSNILINE 143 (328)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEeECC
Confidence 2334445788999999999999999 999999999999874
No 346
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.74 E-value=1.8e-17 Score=109.79 Aligned_cols=105 Identities=30% Similarity=0.478 Sum_probs=83.2
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||||.+.... .....+.+.+|+.+++.++|+||+.+++++..+. ...++++|++ +++|..++.. .
T Consensus 43 vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-~------- 113 (343)
T cd07880 43 VAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH-E------- 113 (343)
T ss_pred EEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc-C-------
Confidence 5788876542 2234466789999999999999999999986332 2468999999 5788877653 2
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+++..++.++.|++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 114 -----~l~~~~~~~i~~qi~~al~~LH~~g--i~H~dlkp~Nill~~ 153 (343)
T cd07880 114 -----KLSEDRIQFLVYQMLKGLKYIHAAG--IIHRDLKPGNLAVNE 153 (343)
T ss_pred -----CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcC
Confidence 3455566899999999999999999 999999999999874
No 347
>KOG0199|consensus
Probab=99.74 E-value=2.5e-18 Score=119.73 Aligned_cols=107 Identities=25% Similarity=0.308 Sum_probs=90.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||||++..+..-..-.+|++|+.+|.+++|+|++++||+.. + ....||+|.+..|+|.+.|..... ..
T Consensus 141 VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl-~-qp~mMV~ELaplGSLldrLrka~~----------~~ 208 (1039)
T KOG0199|consen 141 VAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVL-D-QPAMMVFELAPLGSLLDRLRKAKK----------AI 208 (1039)
T ss_pred EEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeec-c-chhhHHhhhcccchHHHHHhhccc----------cc
Confidence 79999998743336789999999999999999999999997 4 566799999999999999986221 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.-..+..|+.||+.||.||.+++ ++||||..+|+++.+
T Consensus 209 llv~~Lcdya~QiA~aM~YLeskr--lvHRDLAARNlllas 247 (1039)
T KOG0199|consen 209 LLVSRLCDYAMQIAKAMQYLESKR--LVHRDLAARNLLLAS 247 (1039)
T ss_pred eeHHHHHHHHHHHHHHHHHHhhhh--hhhhhhhhhhheecc
Confidence 344455899999999999999999 999999999999853
No 348
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.74 E-value=1.2e-17 Score=110.33 Aligned_cols=106 Identities=26% Similarity=0.420 Sum_probs=84.2
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC----CeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA----NSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
||+|.+.... .......+.+|+.+++.++|+||+++++++.... ...++++||+. ++|.+.+...+.
T Consensus 33 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~------- 104 (337)
T cd07858 33 VAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSSQT------- 104 (337)
T ss_pred EEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhcCCC-------
Confidence 5788776542 2334456778999999999999999999885222 35789999997 788888765433
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 105 -----l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dlkp~Nil~~~ 143 (337)
T cd07858 105 -----LSDDHCQYFLYQLLRGLKYIHSAN--VLHRDLKPSNLLLNA 143 (337)
T ss_pred -----CCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcC
Confidence 444555999999999999999999 999999999999874
No 349
>KOG3653|consensus
Probab=99.74 E-value=9.7e-18 Score=112.04 Aligned_cols=105 Identities=24% Similarity=0.275 Sum_probs=85.4
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhh--CCCCCccceeeeee---eCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKA--LDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~--~~h~~i~~~~~~~~---~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
||||+++.. ..+.+.+|-++... ++|+||++++++-. .....+++|++|.+.|+|.++++.+
T Consensus 236 VAVKifp~~----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~n--------- 302 (534)
T KOG3653|consen 236 VAVKIFPEQ----EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKAN--------- 302 (534)
T ss_pred eEEEecCHH----HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhc---------
Confidence 799999855 56778877777665 58999999999875 1123788999999999999999974
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcC-------CCCeeeeCCCCCCcccccC
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEI-------KPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~-------~~~i~h~dlk~~nill~~~ 122 (122)
.+.|....+++..+++|+.|||+. .++|+|||||..|||+..+
T Consensus 303 ----tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D 352 (534)
T KOG3653|consen 303 ----TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKND 352 (534)
T ss_pred ----cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccC
Confidence 334555689999999999999983 3579999999999998653
No 350
>KOG2052|consensus
Probab=99.74 E-value=1.2e-17 Score=110.91 Aligned_cols=105 Identities=22% Similarity=0.310 Sum_probs=85.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC--CCCCccceeeeeeeCCC---eEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL--DHPRVVKLYDVFEIDAN---SFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~--~h~~i~~~~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
||||++... +.+.+.+|.++.+.+ +|+||+.++++-..+.+ .+++|.+|-+.|+|.++|.. ..+.....
T Consensus 237 VAVKiF~sr----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~m- 310 (513)
T KOG2052|consen 237 VAVKIFSSR----DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGM- 310 (513)
T ss_pred eEEEEeccc----chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh-ccCCHHHH-
Confidence 799999865 346788888888865 99999999998743333 58999999999999999986 44444444
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHc------CCCCeeeeCCCCCCcccccC
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNE------IKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~------~~~~i~h~dlk~~nill~~~ 122 (122)
+.++..++.|+.+||. ..|.|.|||||..|||+.++
T Consensus 311 -----------l~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn 352 (513)
T KOG2052|consen 311 -----------LKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 352 (513)
T ss_pred -----------HHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccC
Confidence 8899999999999996 23679999999999998753
No 351
>KOG0201|consensus
Probab=99.74 E-value=3.6e-19 Score=117.70 Aligned_cols=106 Identities=22% Similarity=0.343 Sum_probs=93.1
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|++.-...+...+++..|+.++.+++++||..+|+++. .+..++++||||.||++...++....+.+.
T Consensus 41 vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl-~g~~LwiiMey~~gGsv~~lL~~~~~~~E~-------- 111 (467)
T KOG0201|consen 41 VAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYL-KGTKLWIIMEYCGGGSVLDLLKSGNILDEF-------- 111 (467)
T ss_pred EEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhhee-ecccHHHHHHHhcCcchhhhhccCCCCccc--------
Confidence 68999998877777889999999999999999999999998 778889999999999999999865443333
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.-++++++.|+.|+|..+ .+|||+|+.||++..
T Consensus 112 ----~i~~ilre~l~~l~ylH~~~--kiHrDIKaanil~s~ 146 (467)
T KOG0201|consen 112 ----EIAVILREVLKGLDYLHSEK--KIHRDIKAANILLSE 146 (467)
T ss_pred ----eeeeehHHHHHHhhhhhhcc--eecccccccceeEec
Confidence 33678999999999999999 999999999999874
No 352
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.74 E-value=1.5e-17 Score=107.05 Aligned_cols=107 Identities=28% Similarity=0.418 Sum_probs=86.1
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.+.............+|+..+++++ |+|++.+++.+. ..+..++++||+ +++|.+.+.... ..
T Consensus 27 ~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~-~~~l~~~~~~~~----------~~ 94 (283)
T cd07830 27 VAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFR-ENDELYFVFEYM-EGNLYQLMKDRK----------GK 94 (283)
T ss_pred EEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhh-cCCcEEEEEecC-CCCHHHHHHhcc----------cc
Confidence 46777765533223344567899999998 999999999998 678889999999 689988887543 12
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..+..++.|++.++.|||+.+ ++|+||+|+||++++
T Consensus 95 ~~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~dl~~~ni~i~~ 134 (283)
T cd07830 95 PFSESVIRSIIYQILQGLAHIHKHG--FFHRDLKPENLLVSG 134 (283)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEEcC
Confidence 4456667999999999999999999 999999999999975
No 353
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.74 E-value=2.1e-17 Score=105.35 Aligned_cols=97 Identities=27% Similarity=0.506 Sum_probs=81.3
Q ss_pred chHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHH
Q psy4991 14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQV 93 (122)
Q Consensus 14 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 93 (122)
....+.+|+.+++.++|||++++++.+. +....++++||+++++|...+..... ....+.+..++.++.|+
T Consensus 45 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~~l 115 (260)
T cd08222 45 ETVQANQEAQLLSKLDHPAIVKFHASFL-ERDAFCIITEYCEGRDLDCKLEELKH--------TGKTLSENQVCEWFIQL 115 (260)
T ss_pred hHHHHHHHHHHHHhCCCCcHHHHHHHHh-cCCceEEEEEeCCCCCHHHHHHHHhh--------cccccCHHHHHHHHHHH
Confidence 3445678899999999999999999997 66778899999999999888864211 12356667779999999
Q ss_pred HHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 94 VSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 94 ~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.|+.|||+.+ ++|+|++|+||++++
T Consensus 116 ~~~l~~lH~~~--i~h~~l~~~nili~~ 141 (260)
T cd08222 116 LLGVHYMHQRR--ILHRDLKAKNIFLKN 141 (260)
T ss_pred HHHHHHHHHcC--ccccCCChhheEeec
Confidence 99999999999 999999999999864
No 354
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.74 E-value=4e-17 Score=106.90 Aligned_cols=106 Identities=22% Similarity=0.342 Sum_probs=85.0
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
||+|.+.... .....+.+.+|+++++.++|+|++.+++++. +....++++||+. |++..++....
T Consensus 49 v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~----------- 115 (313)
T cd06633 49 VAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYL-KEHTAWLVMEYCL-GSASDLLEVHK----------- 115 (313)
T ss_pred EEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEE-eCCEEEEEEecCC-CCHHHHHHhcC-----------
Confidence 4677776432 2223456788999999999999999999998 6678899999997 67777765421
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.++.+..+..++.|++.++.|||+.+ ++|+|++|+||+++.
T Consensus 116 ~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dl~p~nili~~ 156 (313)
T cd06633 116 KPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTE 156 (313)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChhhEEECC
Confidence 23455666899999999999999999 999999999999874
No 355
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.74 E-value=2.6e-17 Score=105.60 Aligned_cols=78 Identities=27% Similarity=0.403 Sum_probs=69.0
Q ss_pred CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCee
Q psy4991 29 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVI 108 (122)
Q Consensus 29 ~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~ 108 (122)
+|+|++++++.+. ..+..++++||+++++|.+++..... +.+..++.++.|++.|+.|||+.+ ++
T Consensus 67 ~h~~iv~~~~~~~-~~~~~~iv~e~~~~~~L~~~l~~~~~------------l~~~~~~~~~~qi~~~l~~lH~~~--i~ 131 (267)
T PHA03390 67 DNPNFIKLYYSVT-TLKGHVLIMDYIKDGDLFDLLKKEGK------------LSEAEVKKIIRQLVEALNDLHKHN--II 131 (267)
T ss_pred cCCCEEEEEEEEe-cCCeeEEEEEcCCCCcHHHHHHhcCC------------CCHHHHHHHHHHHHHHHHHHHhCC--ee
Confidence 7999999999998 66789999999999999999876433 445555999999999999999999 99
Q ss_pred eeCCCCCCccccc
Q psy4991 109 HYDLKPGKPLFLF 121 (122)
Q Consensus 109 h~dlk~~nill~~ 121 (122)
|+||+|+||+++.
T Consensus 132 H~dl~p~nil~~~ 144 (267)
T PHA03390 132 HNDIKLENVLYDR 144 (267)
T ss_pred eCCCCHHHEEEeC
Confidence 9999999999875
No 356
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.74 E-value=2.6e-17 Score=108.66 Aligned_cols=105 Identities=30% Similarity=0.459 Sum_probs=82.5
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhC-CCCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
+|+|.+... ........+.+|+.+++++ +|+||+++++++.. +....++++||+. ++|...+... .
T Consensus 35 ~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~--------- 103 (337)
T cd07852 35 VALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME-TDLHAVIRAN-I--------- 103 (337)
T ss_pred EEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc-cCHHHHHhcC-C---------
Confidence 467777543 2223445677899999999 99999999998852 3346889999998 6888877642 2
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+...+.++.|++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 104 ---~~~~~~~~i~~qi~~~L~~LH~~~--i~H~dl~p~nill~~ 142 (337)
T cd07852 104 ---LEDVHKRYIMYQLLKALKYIHSGN--VIHRDLKPSNILLNS 142 (337)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcC
Confidence 233445789999999999999999 999999999999975
No 357
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.74 E-value=1.6e-17 Score=107.98 Aligned_cols=107 Identities=26% Similarity=0.390 Sum_probs=84.5
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC---------CeEEEEEeccCCCCHHHHHHhccchh
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA---------NSFCTVLEYCDGHDLDFYLKQHKTIA 70 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~---------~~~~lv~e~~~~~~L~~~l~~~~~~~ 70 (122)
||+|.+.... .......+.+|+++++.++|||++++++.+.... ..+++++||+. +++...+...
T Consensus 35 v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~---- 109 (302)
T cd07864 35 VALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMD-HDLMGLLESG---- 109 (302)
T ss_pred EEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccC-ccHHHHHhcC----
Confidence 4778876542 2334467788999999999999999999886222 37889999998 5777666532
Q ss_pred HHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 71 EREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
...+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 110 -------~~~~~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~ 151 (302)
T cd07864 110 -------LVHFSEDHIKSFMKQLLEGLNYCHKKN--FLHRDIKCSNILLNN 151 (302)
T ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECC
Confidence 124556677999999999999999999 999999999999875
No 358
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.74 E-value=8.9e-18 Score=110.48 Aligned_cols=106 Identities=27% Similarity=0.431 Sum_probs=86.0
Q ss_pred CeeeeccCCCC-CcchHHHHHHHHHHhhCCCCCccceeeeeeeCC----CeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNLN-LPFPRHALREYNIHKALDHPRVVKLYDVFEIDA----NSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
||+|.+..... ....+.+.+|+.+++.++|+||+.+.+++.... ...++++||+. ++|.+.+....
T Consensus 28 ~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-------- 98 (330)
T cd07834 28 VAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVIKSPQ-------- 98 (330)
T ss_pred EEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchh-hhHHHHHhCCC--------
Confidence 47787776532 345577889999999999999999999987232 36889999998 68888776533
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 99 ----~l~~~~~~~i~~~l~~~l~~LH~~g--i~H~dlkp~nili~~ 138 (330)
T cd07834 99 ----PLTDDHIQYFLYQILRGLKYLHSAN--VIHRDLKPSNILVNS 138 (330)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcC
Confidence 3445556899999999999999999 999999999999975
No 359
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.73 E-value=3.9e-17 Score=105.80 Aligned_cols=111 Identities=25% Similarity=0.373 Sum_probs=85.8
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCC----eEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDAN----SFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||+|...... .......+.+|+.+++.+ +|+|++++++++..... ..++++||+. ++|.+++......
T Consensus 29 v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~----- 102 (295)
T cd07837 29 VALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLD-SDLKKFMDSNGRG----- 102 (295)
T ss_pred EEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccC-cCHHHHHHHhccc-----
Confidence 5778776543 223446788899999999 56999999998862222 3789999998 5888887643211
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
....+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 103 --~~~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~~~nil~~~ 145 (295)
T cd07837 103 --PGRPLPAKTIKSFMYQLLKGVAHCHKHG--VMHRDLKPQNLLVDK 145 (295)
T ss_pred --CCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEec
Confidence 1234567778999999999999999999 999999999999975
No 360
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.73 E-value=6.8e-17 Score=103.46 Aligned_cols=96 Identities=26% Similarity=0.432 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHhh-CCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHH
Q psy4991 15 PRHALREYNIHKA-LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQV 93 (122)
Q Consensus 15 ~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 93 (122)
..++..|+.++.+ ++|+|++.+++.+. ..+..++++||+++++|.+++.... .....+.+..++.++.|+
T Consensus 52 ~~~~~~e~~~l~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~l~~~~--------~~~~~~~~~~~~~~~~~l 122 (269)
T cd08528 52 IGDIVSEVTIIKEQLRHPNIVRYYKTFL-ENDRLYIVMDLIEGAPLGEHFNSLK--------EKKQRFTEERIWNIFVQM 122 (269)
T ss_pred HHHHHHHHHHHhhcCCCCCeeeEEeeEc-cCCeEEEEEecCCCCcHHHHHHHHH--------hccCCCCHHHHHHHHHHH
Confidence 4556778887765 69999999999998 6788999999999999998875411 112346667779999999
Q ss_pred HHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991 94 VSALKYLNE-IKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 94 ~~~l~~lh~-~~~~i~h~dlk~~nill~~ 121 (122)
+.++.|||+ .+ ++|+|++|+||+++.
T Consensus 123 ~~~l~~lh~~~~--i~H~dl~~~nil~~~ 149 (269)
T cd08528 123 VLALRYLHKEKR--IVHRDLTPNNIMLGE 149 (269)
T ss_pred HHHHHHhccCCc--eeecCCCHHHEEECC
Confidence 999999996 67 999999999999874
No 361
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.73 E-value=1.3e-17 Score=115.33 Aligned_cols=97 Identities=19% Similarity=0.264 Sum_probs=77.0
Q ss_pred chHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHH
Q psy4991 14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQV 93 (122)
Q Consensus 14 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 93 (122)
....+.+|+.+++.++|+||+.+++++. ..+..+++++++. +++..++..... .. ........+..++.|+
T Consensus 206 ~~~~~~~Ei~il~~l~HpnIv~l~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~~-~~------~~~~~~~~~~~i~~ql 276 (501)
T PHA03210 206 AAIQLENEILALGRLNHENILKIEEILR-SEANTYMITQKYD-FDLYSFMYDEAF-DW------KDRPLLKQTRAIMKQL 276 (501)
T ss_pred HHHHHHHHHHHHHhCCCCCcCcEeEEEE-ECCeeEEEEeccc-cCHHHHHhhccc-cc------cccccHHHHHHHHHHH
Confidence 3456789999999999999999999998 6677889999986 677777654211 00 0112244567899999
Q ss_pred HHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 94 VSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 94 ~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.||.|||+.+ ++||||||+|||++.
T Consensus 277 ~~aL~yLH~~g--IiHrDLKP~NILl~~ 302 (501)
T PHA03210 277 LCAVEYIHDKK--LIHRDIKLENIFLNC 302 (501)
T ss_pred HHHHHHHHhCC--eecCCCCHHHEEECC
Confidence 99999999999 999999999999974
No 362
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.73 E-value=3.3e-17 Score=105.39 Aligned_cols=106 Identities=28% Similarity=0.484 Sum_probs=86.9
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|.+.... .+.....+.+|+.+++.++|+|++.+++.+. .+...++++||+. +++.+++.... .
T Consensus 27 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~v~e~~~-~~l~~~l~~~~-----------~ 93 (283)
T cd05118 27 VAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR-HKGDLYLVFEFMD-TDLYKLIKDRQ-----------R 93 (283)
T ss_pred EEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhc-cCCCEEEEEeccC-CCHHHHHHhhc-----------c
Confidence 4677776542 2234577889999999999999999999998 6788899999998 58888776521 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 94 ~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~ 133 (283)
T cd05118 94 GLPESLIKSYLYQLLQGLAFCHSHG--ILHRDLKPENLLINT 133 (283)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHCC--eeecCcCHHHEEECC
Confidence 3455666899999999999999999 999999999999975
No 363
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.73 E-value=3e-17 Score=105.56 Aligned_cols=106 Identities=34% Similarity=0.556 Sum_probs=88.2
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|.+.... .....+.+..|+.+++.++|+|++.+++.+. +....++++||+. ++|.+++.... .
T Consensus 27 ~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~~v~e~~~-~~l~~~i~~~~-----------~ 93 (282)
T cd07829 27 VALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIH-TERKLYLVFEYCD-MDLKKYLDKRP-----------G 93 (282)
T ss_pred EEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhh-cCCceEEEecCcC-cCHHHHHHhhc-----------c
Confidence 4677777653 3345577888999999999999999999998 6688899999998 68999887642 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..+..++.|++.++.|||+.+ ++|+|++|+||++++
T Consensus 94 ~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~~l~~~ni~~~~ 133 (282)
T cd07829 94 PLSPNLIKSIMYQLLRGLAYCHSHR--ILHRDLKPQNILINR 133 (282)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChheEEEcC
Confidence 3455566899999999999999999 999999999999975
No 364
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.72 E-value=6.9e-17 Score=105.55 Aligned_cols=106 Identities=21% Similarity=0.336 Sum_probs=84.5
Q ss_pred CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+|+|.+... ......+++.+|+++++.++|+|++.+.+++. .....++++||+. |++...+....
T Consensus 43 ~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~----------- 109 (308)
T cd06634 43 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-REHTAWLVMEYCL-GSASDLLEVHK----------- 109 (308)
T ss_pred EEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEE-cCCeeEEEEEccC-CCHHHHHHHcC-----------
Confidence 467766543 12234467788999999999999999999998 6678889999997 68877765322
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..+..++.|++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 110 ~~l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nil~~~ 150 (308)
T cd06634 110 KPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSE 150 (308)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHhEEECC
Confidence 23455666899999999999999999 999999999999975
No 365
>KOG1025|consensus
Probab=99.72 E-value=4.3e-18 Score=120.20 Aligned_cols=106 Identities=23% Similarity=0.261 Sum_probs=91.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
||+|++....+.+....++.|+-.|.+++|||++++.++|.. +.+.||++|++.|+|.++++.++. .
T Consensus 728 VaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~--s~~qlvtq~mP~G~LlDyvr~hr~-----------~ 794 (1177)
T KOG1025|consen 728 VAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCML--STLQLVTQLMPLGCLLDYVREHRD-----------N 794 (1177)
T ss_pred eEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhccc--chHHHHHHhcccchHHHHHHHhhc-----------c
Confidence 789999988777778999999999999999999999999972 336689999999999999997543 3
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+-.+..+.|..||+.||.|||.++ ++||||.++|+|+.+
T Consensus 795 igsq~lLnw~~QIAkgM~YLe~qr--lVHrdLaaRNVLVks 833 (1177)
T KOG1025|consen 795 IGSQDLLNWCYQIAKGMKYLEEQR--LVHRDLAARNVLVKS 833 (1177)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcc--hhhhhhhhhheeecC
Confidence 333445899999999999999999 999999999999864
No 366
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.71 E-value=5.6e-17 Score=107.84 Aligned_cols=96 Identities=20% Similarity=0.129 Sum_probs=71.1
Q ss_pred CeeeeccCCC----CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991 1 MCAKLLTTNL----NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76 (122)
Q Consensus 1 vavK~~~~~~----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 76 (122)
+|||.+.... .....+.+.+|+++++.++|+|++..+..+ +..+++|||+.|++|... .... .
T Consensus 47 vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~~~LVmE~~~G~~L~~~-~~~~------~-- 113 (365)
T PRK09188 47 RAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GKDGLVRGWTEGVPLHLA-RPHG------D-- 113 (365)
T ss_pred EEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CCcEEEEEccCCCCHHHh-Cccc------h--
Confidence 4788765331 122356688999999999999998533222 346899999999888622 1000 0
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCC-CCCCccccc
Q psy4991 77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL-KPGKPLFLF 121 (122)
Q Consensus 77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dl-k~~nill~~ 121 (122)
..++.+++.++.|+|+.+ ++|||| ||+|||++.
T Consensus 114 ----------~~~~~~i~~aL~~lH~~g--IiHrDL~KP~NILv~~ 147 (365)
T PRK09188 114 ----------PAWFRSAHRALRDLHRAG--ITHNDLAKPQNWLMGP 147 (365)
T ss_pred ----------HHHHHHHHHHHHHHHHCC--CeeCCCCCcceEEEcC
Confidence 457889999999999999 999999 999999964
No 367
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.71 E-value=6.9e-17 Score=106.51 Aligned_cols=106 Identities=25% Similarity=0.418 Sum_probs=82.6
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhC-CCCCccceeeeeee---CCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
||+|.+.... .....+.+.+|+.+++.+ +|+||+++++.+.. .....+++++++. ++|...+.....
T Consensus 30 ~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~------- 101 (332)
T cd07857 30 VAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRSGQP------- 101 (332)
T ss_pred EEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhcCCC-------
Confidence 5788776542 223456788999999999 69999999987531 2245778889887 789888865433
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.|++.|+.|||+.+ ++|+|+||+||+++.
T Consensus 102 -----~~~~~~~~~~~qi~~aL~~LH~~g--ivH~dlkp~Nili~~ 140 (332)
T cd07857 102 -----LTDAHFQSFIYQILCGLKYIHSAN--VLHRDLKPGNLLVNA 140 (332)
T ss_pred -----CCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHeEEcC
Confidence 344555899999999999999999 999999999999874
No 368
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.71 E-value=6.6e-17 Score=107.06 Aligned_cols=104 Identities=35% Similarity=0.504 Sum_probs=82.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-------------CeEEEEEeccCCCCHHHHHHhcc
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-------------NSFCTVLEYCDGHDLDFYLKQHK 67 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-------------~~~~lv~e~~~~~~L~~~l~~~~ 67 (122)
||+|.+.... ....+.+.+|++++++++|+||+++++.+.... ...++++||+. ++|.+++...
T Consensus 33 v~iK~i~~~~-~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~- 109 (342)
T cd07854 33 VAVKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQG- 109 (342)
T ss_pred EEEEEEecCC-CchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeeccc-ccHHHHHHcC-
Confidence 4677765542 234567888999999999999999998775222 35789999997 6887776531
Q ss_pred chhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 68 TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.|+.|||+.+ ++|+||||+||+++.
T Consensus 110 ------------~l~~~~~~~~~~qi~~aL~~LH~~g--ivH~dikp~Nili~~ 149 (342)
T cd07854 110 ------------PLSEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANVFINT 149 (342)
T ss_pred ------------CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcC
Confidence 2445566899999999999999999 999999999999963
No 369
>KOG4279|consensus
Probab=99.71 E-value=4.4e-17 Score=113.95 Aligned_cols=106 Identities=21% Similarity=0.296 Sum_probs=89.2
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHh-ccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-HKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ 79 (122)
+|||.++... ....+.+..|+.+-++++|.|||++.|++. ..+.+-++||-.+||+|..+++. ++++..
T Consensus 603 IaIKEIpekd-sr~~QPLhEEIaLH~~LrHkNIVrYLGs~s-enGf~kIFMEqVPGGSLSsLLrskWGPlKD-------- 672 (1226)
T KOG4279|consen 603 IAIKEIPEKD-SREVQPLHEEIALHSTLRHKNIVRYLGSVS-ENGFFKIFMEQVPGGSLSSLLRSKWGPLKD-------- 672 (1226)
T ss_pred EEeeeccccc-chhhccHHHHHHHHHHHhhHhHHHHhhccC-CCCeEEEEeecCCCCcHHHHHHhccCCCcc--------
Confidence 4788887663 335788999999999999999999999997 67788899999999999999985 344322
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
.+..+-.+..||++|+.|||++. |+|||||-.|+|+.
T Consensus 673 --NEstm~fYtkQILeGLkYLHen~--IVHRDIKGDNVLvN 709 (1226)
T KOG4279|consen 673 --NESTMNFYTKQILEGLKYLHENK--IVHRDIKGDNVLVN 709 (1226)
T ss_pred --chhHHHHHHHHHHHHhhhhhhcc--eeeccccCCcEEEe
Confidence 22344788999999999999999 99999999999985
No 370
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.71 E-value=1.1e-16 Score=103.41 Aligned_cols=110 Identities=25% Similarity=0.320 Sum_probs=84.0
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|.+...........+.+|+.++.++. |+||+++++.+. .....++++||+. +++.++...-.. ....
T Consensus 32 ~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~-~~~~~~~~~e~~~-~~l~~l~~~~~~-------~~~~ 102 (288)
T cd06616 32 MAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALF-REGDCWICMELMD-ISLDKFYKYVYE-------VLKS 102 (288)
T ss_pred EEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEe-cCCcEEEEEeccc-CCHHHHHHHHHH-------hhcC
Confidence 47887776543445567889999999995 999999999987 6677889999987 566554432100 0113
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~ 121 (122)
.+++..+..++.|++.|+.|||+. + ++|+||||+||++++
T Consensus 103 ~l~~~~~~~i~~~i~~~l~~lh~~~~--i~H~dlkp~Nil~~~ 143 (288)
T cd06616 103 VIPEEILGKIAVATVKALNYLKEELK--IIHRDVKPSNILLDR 143 (288)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCC--eeccCCCHHHEEEcc
Confidence 456677799999999999999975 7 999999999999874
No 371
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.71 E-value=5.7e-17 Score=105.59 Aligned_cols=107 Identities=30% Similarity=0.409 Sum_probs=82.4
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-------CCeEEEEEeccCCCCHHHHHHhccchhHH
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-------ANSFCTVLEYCDGHDLDFYLKQHKTIAER 72 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 72 (122)
+|+|.+.... .......+.+|+++++.++|+||+.+++.+... ...+++++||+. +++...+....
T Consensus 36 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~-~~l~~~~~~~~----- 109 (311)
T cd07866 36 VALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMD-HDLSGLLENPS----- 109 (311)
T ss_pred EEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCC-cCHHHHHhccc-----
Confidence 4677776542 222345678899999999999999999887522 234789999997 56766654321
Q ss_pred hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..+..++.|++.++.|||+.+ ++|+|+||+||++++
T Consensus 110 ------~~~~~~~~~~i~~~l~~al~~lH~~~--i~H~dl~p~nil~~~ 150 (311)
T cd07866 110 ------VKLTESQIKCYMLQLLEGINYLHENH--ILHRDIKAANILIDN 150 (311)
T ss_pred ------cCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECC
Confidence 23556667999999999999999999 999999999999875
No 372
>KOG1290|consensus
Probab=99.70 E-value=6.6e-17 Score=108.62 Aligned_cols=106 Identities=25% Similarity=0.386 Sum_probs=84.0
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCC-----C---CCccceeeeeee---CCCeEEEEEeccCCCCHHHHHHhccch
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALD-----H---PRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTI 69 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-----h---~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~ 69 (122)
||+|+.+.. +-..++.+.||.+|+++. + ..||++++.|.. ++..+|||+|++. ..|..++.....
T Consensus 106 VAlKVvKSA--qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLG-dnLLklI~~s~Y- 181 (590)
T KOG1290|consen 106 VALKVVKSA--QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLG-DNLLKLIKYSNY- 181 (590)
T ss_pred EEEEEEehh--hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhh-hHHHHHHHHhCC-
Confidence 688887744 445688899999999982 2 268999999963 4568999999995 788777775432
Q ss_pred hHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 70 AEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
..++...+..+++|++.||.|||.. ++|+|-||||+|||+.
T Consensus 182 ---------rGlpl~~VK~I~~qvL~GLdYLH~e-cgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 182 ---------RGLPLSCVKEICRQVLTGLDYLHRE-CGIIHTDLKPENVLLC 222 (590)
T ss_pred ---------CCCcHHHHHHHHHHHHHHHHHHHHh-cCccccCCCcceeeee
Confidence 3445556699999999999999996 5599999999999985
No 373
>KOG0986|consensus
Probab=99.70 E-value=6.4e-18 Score=112.78 Aligned_cols=95 Identities=27% Similarity=0.399 Sum_probs=81.1
Q ss_pred chHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHH
Q psy4991 14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQV 93 (122)
Q Consensus 14 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 93 (122)
.....++|-.+|++++.+.||.+-.+|+ +.+.+|+|+..|.||+|.--+...+. ..+.+..+..|+.+|
T Consensus 228 ge~maLnEk~iL~kV~s~FiVslaYAfe-Tkd~LClVLtlMNGGDLkfHiyn~g~----------~gF~e~ra~FYAAEi 296 (591)
T KOG0986|consen 228 GETMALNEKQILEKVSSPFIVSLAYAFE-TKDALCLVLTLMNGGDLKFHIYNHGN----------PGFDEQRARFYAAEI 296 (591)
T ss_pred hhHHhhHHHHHHHHhccCcEEEEeeeec-CCCceEEEEEeecCCceeEEeeccCC----------CCCchHHHHHHHHHH
Confidence 3456688999999999999999988888 88999999999999999766655442 233444459999999
Q ss_pred HHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 94 VSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 94 ~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+-|+.+||..+ |+.||+||+|||||+
T Consensus 297 ~cGLehlH~~~--iVYRDLKPeNILLDd 322 (591)
T KOG0986|consen 297 ICGLEHLHRRR--IVYRDLKPENILLDD 322 (591)
T ss_pred HhhHHHHHhcc--eeeccCChhheeecc
Confidence 99999999999 999999999999986
No 374
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.70 E-value=1.8e-16 Score=105.15 Aligned_cols=105 Identities=26% Similarity=0.406 Sum_probs=81.6
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||+|.+.... +....+.+.+|+.++++++|+||+++++.+... ....+++++++ +++|...+...
T Consensus 45 vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~-------- 115 (345)
T cd07877 45 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ-------- 115 (345)
T ss_pred EEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhcC--------
Confidence 5788876542 222346678899999999999999999988522 13467888887 58888776531
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..++.++.|++.|+.|||+.+ ++|+|+||+||+++.
T Consensus 116 -----~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~ 155 (345)
T cd07877 116 -----KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNE 155 (345)
T ss_pred -----CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEcC
Confidence 2444556899999999999999999 999999999999975
No 375
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.70 E-value=1.2e-16 Score=100.14 Aligned_cols=106 Identities=40% Similarity=0.571 Sum_probs=88.5
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|++.........+.+.+|++.+++++|+|++.+.+.+. .....++++||+.+++|..++.....
T Consensus 17 ~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-~~~~~~l~~e~~~~~~L~~~~~~~~~------------ 83 (244)
T smart00220 17 VAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFE-DEDKLYLVMEYCDGGDLFDLLKKRGR------------ 83 (244)
T ss_pred EEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhhee-eCCEEEEEEeCCCCCCHHHHHHhccC------------
Confidence 47787776533322678899999999999999999999998 56788899999998899998875432
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.+++.++.+||+.+ ++|+|++|+||+++.
T Consensus 84 ~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~i~~~ni~~~~ 122 (244)
T smart00220 84 LSEDEARFYARQILSALEYLHSNG--IIHRDLKPENILLDE 122 (244)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcC--eecCCcCHHHeEECC
Confidence 344556899999999999999999 999999999999975
No 376
>KOG1035|consensus
Probab=99.70 E-value=2.7e-17 Score=119.52 Aligned_cols=35 Identities=26% Similarity=0.473 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 85 SARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 85 ~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..|.++++|++|+.|+|+.| ++||||||.||++++
T Consensus 698 ~~wrLFreIlEGLaYIH~~g--iIHRDLKP~NIFLd~ 732 (1351)
T KOG1035|consen 698 EAWRLFREILEGLAYIHDQG--IIHRDLKPRNIFLDS 732 (1351)
T ss_pred HHHHHHHHHHHHHHHHHhCc--eeeccCCcceeEEcC
Confidence 45899999999999999999 999999999999985
No 377
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.70 E-value=2.9e-16 Score=101.20 Aligned_cols=107 Identities=27% Similarity=0.466 Sum_probs=83.0
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhC---CCCCccceeeeeeeCCCe-----EEEEEeccCCCCHHHHHHhccchhH
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKAL---DHPRVVKLYDVFEIDANS-----FCTVLEYCDGHDLDFYLKQHKTIAE 71 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~---~h~~i~~~~~~~~~~~~~-----~~lv~e~~~~~~L~~~l~~~~~~~~ 71 (122)
+|+|.+.... .......+.+|+.++..+ +|+|++++++.+. .... .++++||+. ++|.+++.....
T Consensus 27 ~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~-~~~~~~~~~~~l~~e~~~-~~l~~~l~~~~~--- 101 (287)
T cd07838 27 VALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCH-GPRTDRELKLTLVFEHVD-QDLATYLSKCPK--- 101 (287)
T ss_pred EEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEe-eccCCCCceeEEEehhcc-cCHHHHHHHccC---
Confidence 5788887542 222345566788777665 6999999999997 4343 889999997 688887765321
Q ss_pred HhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 72 REARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 102 -------~~l~~~~~~~~~~~i~~al~~LH~~~--i~h~~l~~~nili~~ 142 (287)
T cd07838 102 -------PGLPPETIKDLMRQLLRGVDFLHSHR--IVHRDLKPQNILVTS 142 (287)
T ss_pred -------CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhEEEcc
Confidence 23566777999999999999999999 999999999999875
No 378
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.70 E-value=3.7e-17 Score=100.39 Aligned_cols=86 Identities=16% Similarity=0.196 Sum_probs=62.6
Q ss_pred HHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHH
Q psy4991 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALK 98 (122)
Q Consensus 19 ~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 98 (122)
.+|++.+..+.++++........ . . .+++|||++++++......... +....+..++.|++.++.
T Consensus 67 ~~E~~~l~~l~~~~v~~p~~~~~-~-~-~~iVmE~i~g~~l~~~~~~~~~------------~~~~~~~~i~~qi~~~L~ 131 (190)
T cd05147 67 EKEMRNLKRLVTAGIPCPEPILL-K-S-HVLVMEFIGDDGWAAPRLKDAP------------LSESKARELYLQVIQIMR 131 (190)
T ss_pred HHHHHHHHHHHHCCCCCCcEEEe-c-C-CEEEEEEeCCCCCcchhhhcCC------------CCHHHHHHHHHHHHHHHH
Confidence 35999999998877644333222 2 2 3799999997766544322222 334455899999999999
Q ss_pred HH-HcCCCCeeeeCCCCCCccccc
Q psy4991 99 YL-NEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 99 ~l-h~~~~~i~h~dlk~~nill~~ 121 (122)
++ |+.+ ++|||+||+||++++
T Consensus 132 ~l~H~~g--iiHrDlkP~NIli~~ 153 (190)
T cd05147 132 ILYQDCR--LVHADLSEYNLLYHD 153 (190)
T ss_pred HHHHhCC--cccCCCCHHHEEEEC
Confidence 99 6888 999999999999963
No 379
>KOG1027|consensus
Probab=99.69 E-value=3.2e-17 Score=115.42 Aligned_cols=105 Identities=26% Similarity=0.381 Sum_probs=81.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||||.+-.. ...-+.+|+.+|+.- +||||+++|+.-. +.+..|++.|.|. .+|.+++..... ..... .
T Consensus 536 VAVKrll~e----~~~~A~rEi~lL~eSD~H~NviRyyc~E~-d~qF~YIalELC~-~sL~dlie~~~~-d~~~~----~ 604 (903)
T KOG1027|consen 536 VAVKRLLEE----FFDFAQREIQLLQESDEHPNVIRYYCSEQ-DRQFLYIALELCA-CSLQDLIESSGL-DVEMQ----S 604 (903)
T ss_pred ehHHHHhhH----hHHHHHHHHHHHHhccCCCceEEEEeecc-CCceEEEEehHhh-hhHHHHHhcccc-chhhc----c
Confidence 566666643 445567999999988 7999999998877 8889999999998 899999987411 10000 0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
. -..+..+.|++.|+.+||+.+ |+||||||+||||+.
T Consensus 605 ~---i~~~~~l~q~~~GlaHLHsl~--iVHRDLkPQNILI~~ 641 (903)
T KOG1027|consen 605 D---IDPISVLSQIASGLAHLHSLK--IVHRDLKPQNILISV 641 (903)
T ss_pred c---ccHHHHHHHHHHHHHHHHhcc--cccccCCCceEEEEc
Confidence 0 112678999999999999999 999999999999974
No 380
>KOG0984|consensus
Probab=99.69 E-value=6e-17 Score=98.93 Aligned_cols=111 Identities=23% Similarity=0.320 Sum_probs=89.0
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|+|.+......+...+.++|+.+..+. ..|.++++||.+. +....+++||.|+ .+|..+-++- -....
T Consensus 74 mAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~-regdvwIcME~M~-tSldkfy~~v--------~~~g~ 143 (282)
T KOG0984|consen 74 MAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALF-REGDVWICMELMD-TSLDKFYRKV--------LKKGG 143 (282)
T ss_pred EEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhh-ccccEEEeHHHhh-hhHHHHHHHH--------HhcCC
Confidence 4788888765555667788899987776 8999999999998 6677889999997 7887665541 11234
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
.+++..+-.++..++.|+.|||++ ..++|||+||+|||++.+
T Consensus 144 ~ipE~vlGkIa~Svv~al~~L~~k-L~vIHRDvKPsNiLIn~~ 185 (282)
T KOG0984|consen 144 TIPEDVLGKIAVSVVHALEFLHSK-LSVIHRDVKPSNILINYD 185 (282)
T ss_pred cCchHHhhHhHHHHHHHHHHHHHH-hhhhhccCCcceEEEccC
Confidence 567777789999999999999997 559999999999999853
No 381
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.69 E-value=2e-16 Score=102.79 Aligned_cols=106 Identities=27% Similarity=0.345 Sum_probs=82.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||||.++..........+.+|+.++... .|+||+.+++.+. +....++++||+. +++..++.... .
T Consensus 43 ~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-~~~~~~~v~e~~~-~~l~~l~~~~~-----------~ 109 (296)
T cd06618 43 MAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFI-TDSDVFICMELMS-TCLDKLLKRIQ-----------G 109 (296)
T ss_pred EEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeee-cCCeEEEEeeccC-cCHHHHHHHhc-----------C
Confidence 5788887653333445667788777666 5999999999998 6778899999986 67777665421 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~ 121 (122)
.+.+..+..++.|++.|+.|||+ .+ ++|+||+|+||+++.
T Consensus 110 ~l~~~~~~~i~~~i~~~l~~lH~~~~--i~H~dl~p~nill~~ 150 (296)
T cd06618 110 PIPEDILGKMTVAIVKALHYLKEKHG--VIHRDVKPSNILLDA 150 (296)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhCC--EecCCCcHHHEEEcC
Confidence 44556668999999999999997 47 999999999999975
No 382
>KOG0671|consensus
Probab=99.69 E-value=4.8e-17 Score=106.28 Aligned_cols=106 Identities=24% Similarity=0.421 Sum_probs=85.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCC-----CccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHP-----RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~-----~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||+|+++.- .+.+++.+-|+++++++ .+. .++.+.++|. =.+..|+|+|.+. -++.++++.+..
T Consensus 117 vAlKIik~V--~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd-yrghiCivfellG-~S~~dFlk~N~y------ 186 (415)
T KOG0671|consen 117 VALKIIKNV--DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFD-YRGHICIVFELLG-LSTFDFLKENNY------ 186 (415)
T ss_pred ehHHHHHHH--HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh-ccCceEEEEeccC-hhHHHHhccCCc------
Confidence 577777755 44678888899999999 332 3566666676 6678999999994 799999987544
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
.+++..++..++.|++.++.|||+.+ ++|-||||+|||+.++
T Consensus 187 ----~~fpi~~ir~m~~QL~~sv~fLh~~k--l~HTDLKPENILfvss 228 (415)
T KOG0671|consen 187 ----IPFPIDHIRHMGYQLLESVAFLHDLK--LTHTDLKPENILFVSS 228 (415)
T ss_pred ----cccchHHHHHHHHHHHHHHHHHHhcc--eeecCCChheEEEecc
Confidence 45666778999999999999999999 9999999999999754
No 383
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.68 E-value=1.3e-16 Score=105.65 Aligned_cols=105 Identities=27% Similarity=0.378 Sum_probs=83.1
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||+|.+.... +....+.+.+|+.+++.++|+|++.+.+++.... ...++++||+. ++|.+++..
T Consensus 43 ~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--------- 112 (343)
T cd07851 43 VAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMG-ADLNNIVKC--------- 112 (343)
T ss_pred EEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecCC-CCHHHHHhc---------
Confidence 5778776542 2334466788999999999999999998875222 23889999995 799888764
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..++.++.|++.|+.|||+.+ ++|+|++|+||+++.
T Consensus 113 ----~~l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nill~~ 153 (343)
T cd07851 113 ----QKLSDDHIQFLVYQILRGLKYIHSAG--IIHRDLKPSNIAVNE 153 (343)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECC
Confidence 23455566899999999999999999 999999999999875
No 384
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.68 E-value=9.9e-16 Score=93.90 Aligned_cols=107 Identities=36% Similarity=0.587 Sum_probs=88.0
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+++|+..........+.+.+|+..++.++|++++.+++.+. .....++++|++.+++|.+++.... ..
T Consensus 21 ~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~~~~~-----------~~ 88 (215)
T cd00180 21 VAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFE-DENHLYLVMEYCEGGSLKDLLKENE-----------GK 88 (215)
T ss_pred EEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeee-cCCeEEEEEecCCCCcHHHHHHhcc-----------CC
Confidence 35676665532223577899999999999999999999998 5578889999999999999887531 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..++.++.+++.++.+||+.+ ++|+|++|.||+++.
T Consensus 89 ~~~~~~~~~~~~l~~~l~~lh~~~--~~H~dl~~~ni~~~~ 127 (215)
T cd00180 89 LSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENILLDS 127 (215)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHhhEEEeC
Confidence 445566899999999999999999 999999999999875
No 385
>KOG0665|consensus
Probab=99.68 E-value=4.1e-17 Score=104.70 Aligned_cols=104 Identities=24% Similarity=0.375 Sum_probs=81.0
Q ss_pred CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||+|..... .......+..+|..++..++|+|+++++.+|+... ...|++||+|. ++|.+.+.-. +...
T Consensus 44 v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~~e--lDH~-- 118 (369)
T KOG0665|consen 44 VAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQVILME--LDHE-- 118 (369)
T ss_pred eehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHHHHHh--cchH--
Confidence 345554433 23456778889999999999999999999997332 25889999997 8888877621 2222
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..++.|.+.|+.|+|+.+ |+||||||+||++..
T Consensus 119 ----------tis~i~yq~~~~ik~lhs~~--IihRdLkPsnivv~~ 153 (369)
T KOG0665|consen 119 ----------TISYILYQMLCGIKHLHSAG--IIHRDLKPSNIVVNS 153 (369)
T ss_pred ----------HHHHHHHHHHHHHHHHHhcc--eeecccCcccceecc
Confidence 23788999999999999999 999999999999864
No 386
>KOG0587|consensus
Probab=99.67 E-value=1.2e-15 Score=108.19 Aligned_cols=108 Identities=24% Similarity=0.354 Sum_probs=90.3
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeee----eCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFE----IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 75 (122)
.|+|++.... +..+....|.++++.. .|||++.+||+|. ..++.+|+|||||.+|+..++++...
T Consensus 47 aa~kI~~~~~--d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-------- 116 (953)
T KOG0587|consen 47 AAIKIMDPTE--DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-------- 116 (953)
T ss_pred eeeEeecCCc--cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhc--------
Confidence 4788888773 3457778889999888 7999999999994 34568999999999999999998643
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
...+.|..+..++++++.|+.+||... ++|||+|=.|||++.+
T Consensus 117 --g~rl~E~~IaYI~re~lrgl~HLH~nk--viHRDikG~NiLLT~e 159 (953)
T KOG0587|consen 117 --GNRLKEEWIAYILREILRGLAHLHNNK--VIHRDIKGQNVLLTEN 159 (953)
T ss_pred --ccchhhHHHHHHHHHHHHHHHHHhhcc--eeeecccCceEEEecc
Confidence 245566677899999999999999998 9999999999999853
No 387
>KOG0668|consensus
Probab=99.67 E-value=1.1e-16 Score=99.20 Aligned_cols=99 Identities=21% Similarity=0.392 Sum_probs=79.0
Q ss_pred eeeeccCCCCCcchHHHHHHHHHHhhCC-CCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 2 CAKLLTTNLNLPFPRHALREYNIHKALD-HPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 2 avK~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
.||++++- -...+.+|+.+|+.+. ||||+.+++...+ ......+++|+..+.+..++-..
T Consensus 67 ViKiLKPV----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~t-------------- 128 (338)
T KOG0668|consen 67 VIKILKPV----KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYPT-------------- 128 (338)
T ss_pred EEeeechH----HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhhh--------------
Confidence 46666654 3467899999999995 9999999999861 23456789999998777665432
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+....+..++.+++.++.|+|+.| |+|||+||.|++++.
T Consensus 129 -l~d~dIryY~~elLkALdyCHS~G--ImHRDVKPhNvmIdh 167 (338)
T KOG0668|consen 129 -LTDYDIRYYIYELLKALDYCHSMG--IMHRDVKPHNVMIDH 167 (338)
T ss_pred -hchhhHHHHHHHHHHHHhHHHhcC--cccccCCcceeeech
Confidence 233344889999999999999999 999999999999985
No 388
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.67 E-value=4.5e-16 Score=103.09 Aligned_cols=104 Identities=30% Similarity=0.491 Sum_probs=80.6
Q ss_pred CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||+|.+.... .......+.+|+.+++.++|+||+.+++++.... ...++++||+. .++.....
T Consensus 43 vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~---------- 111 (342)
T cd07879 43 VAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQ-TDLQKIMG---------- 111 (342)
T ss_pred EEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEecccc-cCHHHHHc----------
Confidence 5788776542 2334567889999999999999999999886221 34689999996 56655432
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+..+..++.|++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 112 ----~~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dlkp~NIll~~ 152 (342)
T cd07879 112 ----HPLSEDKVQYLVYQMLCGLKYIHSAG--IIHRDLKPGNLAVNE 152 (342)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECC
Confidence 13445556889999999999999999 999999999999974
No 389
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.66 E-value=8.9e-16 Score=94.28 Aligned_cols=85 Identities=18% Similarity=0.138 Sum_probs=62.7
Q ss_pred HHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHH
Q psy4991 19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALK 98 (122)
Q Consensus 19 ~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 98 (122)
.+|.+.+.++.++++........ .. .+++|||++++++......... +.......++.|++.++.
T Consensus 67 ~~E~~~l~~l~~~~i~~p~~~~~-~~--~~lVmE~~~g~~~~~~~l~~~~------------~~~~~~~~i~~~l~~~l~ 131 (190)
T cd05145 67 EKEFRNLKRLYEAGVPVPEPILL-KK--NVLVMEFIGDDGSPAPRLKDVP------------LEEEEAEELYEQVVEQMR 131 (190)
T ss_pred HHHHHHHHHHHhCCCCCceEEEe-cC--CEEEEEEecCCCchhhhhhhcc------------CCHHHHHHHHHHHHHHHH
Confidence 57889999999988755544443 22 3799999997755332212222 223445889999999999
Q ss_pred HHHc-CCCCeeeeCCCCCCcccc
Q psy4991 99 YLNE-IKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 99 ~lh~-~~~~i~h~dlk~~nill~ 120 (122)
++|+ .| ++|+|+||+||+++
T Consensus 132 ~lH~~~g--ivHrDlkP~NIll~ 152 (190)
T cd05145 132 RLYQEAG--LVHGDLSEYNILYH 152 (190)
T ss_pred HHHHhCC--EecCCCChhhEEEE
Confidence 9999 89 99999999999986
No 390
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.66 E-value=1.5e-15 Score=94.53 Aligned_cols=107 Identities=37% Similarity=0.601 Sum_probs=87.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
+|+|.+.........+.+.+|++.++.++|+|++.+++.+. .....++++|++.+++|.+++..... .
T Consensus 27 ~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~-----------~ 94 (225)
T smart00221 27 VAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFE-DPEPLYLVMEYCEGGDLFDYLRKKGG-----------K 94 (225)
T ss_pred EEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeee-cCCceEEEEeccCCCCHHHHHHhccc-----------C
Confidence 46777775532224678889999999999999999999987 66778899999998899998876432 0
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+..+..++.+++.++.++|+.+ ++|+|++|+||+++.
T Consensus 95 ~~~~~~~~~~~~l~~~l~~lh~~~--i~h~di~~~ni~v~~ 133 (225)
T smart00221 95 LSEEEARFYLRQILEALEYLHSLG--IVHRDLKPENILLGM 133 (225)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcC
Confidence 344555899999999999999998 999999999999874
No 391
>KOG0669|consensus
Probab=99.65 E-value=7.2e-17 Score=101.31 Aligned_cols=103 Identities=28% Similarity=0.502 Sum_probs=84.7
Q ss_pred eccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeee-------CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 5 LLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEI-------DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 5 ~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
++..+.+++.....++|+.+|+.++|+|++.++..|.+ ....+|+||++|+ .+|.-++...
T Consensus 50 vlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ce-hDLaGlLsn~----------- 117 (376)
T KOG0669|consen 50 VLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCE-HDLAGLLSNR----------- 117 (376)
T ss_pred HHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhh-hhHHHHhcCc-----------
Confidence 33445677889999999999999999999999988841 1235899999998 7888777542
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
...+.+..+..++.++..|+.|+|... ++|||+||+|+|++.
T Consensus 118 ~vr~sls~Ikk~Mk~Lm~GL~~iHr~k--ilHRDmKaaNvLIt~ 159 (376)
T KOG0669|consen 118 KVRFSLSEIKKVMKGLMNGLYYIHRNK--ILHRDMKAANVLITK 159 (376)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHhh--HHhhcccHhhEEEcC
Confidence 134556677999999999999999999 999999999999986
No 392
>KOG0603|consensus
Probab=99.64 E-value=5.1e-16 Score=106.72 Aligned_cols=98 Identities=33% Similarity=0.508 Sum_probs=76.9
Q ss_pred eeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 2 CAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 2 avK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
|||++.+. ..+..+|+.++... +|+|++++.+.+. ++...|+|||.+.++.+...+...+...
T Consensus 351 ~vkii~~~-----~~~~~~e~~~~~~~~~h~niv~~~~v~~-~~~~~~~v~e~l~g~ell~ri~~~~~~~---------- 414 (612)
T KOG0603|consen 351 AVKIISKR-----ADDNQDEIPISLLVRDHPNIVKSHDVYE-DGKEIYLVMELLDGGELLRRIRSKPEFC---------- 414 (612)
T ss_pred hheecccc-----ccccccccchhhhhcCCCcceeecceec-CCceeeeeehhccccHHHHHHHhcchhH----------
Confidence 45555544 12344577666666 8999999999998 8889999999999888877665433322
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
..+..|+.+++.++.|||++| ++||||||+|||++
T Consensus 415 ---~e~~~w~~~lv~Av~~LH~~g--vvhRDLkp~NIL~~ 449 (612)
T KOG0603|consen 415 ---SEASQWAAELVSAVDYLHEQG--VVHRDLKPGNILLD 449 (612)
T ss_pred ---HHHHHHHHHHHHHHHHHHhcC--eeecCCChhheeec
Confidence 223679999999999999999 99999999999994
No 393
>KOG0696|consensus
Probab=99.63 E-value=1.3e-16 Score=106.09 Aligned_cols=106 Identities=21% Similarity=0.259 Sum_probs=91.2
Q ss_pred CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
+|||+++++. ..++.+-.+.|-++|+.. +-|.++++..+|+ +.+.+|+||||+.||+|.--+..-+.+.+..+
T Consensus 377 yAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQ-TmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~A--- 452 (683)
T KOG0696|consen 377 YAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQ-TMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVA--- 452 (683)
T ss_pred hhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhh-hhhheeeEEEEecCchhhhHHHHhcccCCchh---
Confidence 5899999872 445677788999999888 6788999999888 88899999999999999877776666555555
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..++.+|+-|+=|||+++ |+.||||..|+|++.
T Consensus 453 ---------vFYAaEiaigLFFLh~kg--IiYRDLKLDNvmLd~ 485 (683)
T KOG0696|consen 453 ---------VFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDS 485 (683)
T ss_pred ---------hhhhHHHHHHhhhhhcCC--eeeeeccccceEecc
Confidence 899999999999999999 999999999999985
No 394
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.63 E-value=1.5e-15 Score=95.20 Aligned_cols=99 Identities=12% Similarity=0.214 Sum_probs=75.0
Q ss_pred CeeeeccCCCCCc--chHH------HHHHHHHHhhCCCCCccceeeeeeeC-------CCeEEEEEeccCCCCHHHHHHh
Q psy4991 1 MCAKLLTTNLNLP--FPRH------ALREYNIHKALDHPRVVKLYDVFEID-------ANSFCTVLEYCDGHDLDFYLKQ 65 (122)
Q Consensus 1 vavK~~~~~~~~~--~~~~------~~~e~~~l~~~~h~~i~~~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~ 65 (122)
+|+|++....... ..+. +.+|+..+.++.|++|..+...+... ....+++|||++|.+|.+....
T Consensus 57 ~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~ 136 (232)
T PRK10359 57 YILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPEI 136 (232)
T ss_pred EEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhhc
Confidence 5788887653221 2222 57899999999999999998886422 1357899999999899776321
Q ss_pred ccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 66 HKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
. .....+++.++..+|+.| ++|+|++|+||++++
T Consensus 137 ~--------------------~~~~~~i~~~l~~lH~~g--i~H~Dikp~Nili~~ 170 (232)
T PRK10359 137 S--------------------EDVKAKIKASIESLHQHG--MVSGDPHKGNFIVSK 170 (232)
T ss_pred c--------------------HHHHHHHHHHHHHHHHcC--CccCCCChHHEEEeC
Confidence 0 234568999999999999 999999999999975
No 395
>KOG1152|consensus
Probab=99.62 E-value=6.1e-16 Score=106.01 Aligned_cols=106 Identities=25% Similarity=0.346 Sum_probs=85.7
Q ss_pred CeeeeccCC-------CCCcchHHHHHHHHHHhhCC---CCCccceeeeeeeCCCeEEEEEecc-CCCCHHHHHHhccch
Q psy4991 1 MCAKLLTTN-------LNLPFPRHALREYNIHKALD---HPRVVKLYDVFEIDANSFCTVLEYC-DGHDLDFYLKQHKTI 69 (122)
Q Consensus 1 vavK~~~~~-------~~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~ 69 (122)
|.+|.+.+. ......-..-.|+++|..++ |+||+++.+.|+ +.+.+|+++|-- ++-+|.+++.....+
T Consensus 589 VViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE-ddd~yyl~te~hg~gIDLFd~IE~kp~m 667 (772)
T KOG1152|consen 589 VVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE-DDDYYYLETEVHGEGIDLFDFIEFKPRM 667 (772)
T ss_pred EEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee-cCCeeEEEecCCCCCcchhhhhhccCcc
Confidence 456777654 11222334456999999997 999999999999 888999999975 467889998876665
Q ss_pred hHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 70 AEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..+ ..++.|++.|+++||+++ |+|||||-+|+.++.
T Consensus 668 ~E~eA------------k~IFkQV~agi~hlh~~~--ivhrdikdenvivd~ 705 (772)
T KOG1152|consen 668 DEPEA------------KLIFKQVVAGIKHLHDQG--IVHRDIKDENVIVDS 705 (772)
T ss_pred chHHH------------HHHHHHHHhccccccccC--ceecccccccEEEec
Confidence 55555 899999999999999999 999999999999875
No 396
>KOG1345|consensus
Probab=99.61 E-value=5.6e-16 Score=98.10 Aligned_cols=103 Identities=20% Similarity=0.340 Sum_probs=81.0
Q ss_pred eeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991 2 CAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80 (122)
Q Consensus 2 avK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 80 (122)
++|..+.. ..-..+|.+|-..---+ -|.||+.-|+...++.+...+++||++.|+|.+-+...+ ..+...
T Consensus 53 vlKavp~p--~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~G-igE~~~------ 123 (378)
T KOG1345|consen 53 VLKAVPRP--QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAAG-IGEANT------ 123 (378)
T ss_pred EeeccCcc--hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCccc-ccHHHH------
Confidence 45555544 23457788888766566 589999998887657778889999999999988776533 333333
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..++.|+++++.|||+++ ++|||||.+|||+-+
T Consensus 124 ------K~v~~ql~SAi~fMHskn--lVHRdlK~eNiLif~ 156 (378)
T KOG1345|consen 124 ------KKVFAQLLSAIEFMHSKN--LVHRDLKAENILIFD 156 (378)
T ss_pred ------HHHHHHHHHHHHHhhccc--hhhcccccceEEEec
Confidence 789999999999999999 999999999999853
No 397
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.59 E-value=1.2e-14 Score=100.48 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=72.3
Q ss_pred HHHHHHHHHhhCCCCCc-----cceeeeeee-------CCCeEEEEEeccCCCCHHHHHHhccc-----hhHHh------
Q psy4991 17 HALREYNIHKALDHPRV-----VKLYDVFEI-------DANSFCTVLEYCDGHDLDFYLKQHKT-----IAERE------ 73 (122)
Q Consensus 17 ~~~~e~~~l~~~~h~~i-----~~~~~~~~~-------~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~------ 73 (122)
....|+.++.+++|.++ +.+.++|.. ..+..++|+||+++++|.+++..... +....
T Consensus 218 ~~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l 297 (507)
T PLN03224 218 TGMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKI 297 (507)
T ss_pred hhHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCch
Confidence 34457777777766554 555565531 13457899999999999999875321 11100
Q ss_pred -hhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 74 -ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 74 -~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.......+.+..+..++.|++.++.|+|+.+ ++|||+||+||+++.
T Consensus 298 ~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~--ivHrDLKp~NILl~~ 344 (507)
T PLN03224 298 PDNMPQDKRDINVIKGVMRQVLTGLRKLHRIG--IVHRDIKPENLLVTV 344 (507)
T ss_pred hhhcccccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCchHhEEECC
Confidence 0011123456778899999999999999999 999999999999875
No 398
>KOG0596|consensus
Probab=99.58 E-value=9.4e-15 Score=99.75 Aligned_cols=96 Identities=24% Similarity=0.265 Sum_probs=80.8
Q ss_pred CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHH
Q psy4991 11 NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSI 89 (122)
Q Consensus 11 ~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (122)
+......+.+|+.+|.++ .|.+|++++++-. ..+.+|||||+=+ .+|...+..... ..+...+..+
T Consensus 399 D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv-~d~~lYmvmE~Gd-~DL~kiL~k~~~-----------~~~~~~lk~y 465 (677)
T KOG0596|consen 399 DNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV-TDGYLYMVMECGD-IDLNKILKKKKS-----------IDPDWFLKFY 465 (677)
T ss_pred CHHHHHHHHHHHHHHHHhcCCceEEEEeeeec-cCceEEEEeeccc-ccHHHHHHhccC-----------CCchHHHHHH
Confidence 344567889999999999 6999999999887 6789999999776 899999986432 2222356889
Q ss_pred HHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 90 VMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 90 ~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..|++.++.++|+.| |+|.||||.|+|+.+
T Consensus 466 wkqML~aV~~IH~~g--IVHSDLKPANFLlVk 495 (677)
T KOG0596|consen 466 WKQMLLAVKTIHQHG--IVHSDLKPANFLLVK 495 (677)
T ss_pred HHHHHHHHHHHHHhc--eeecCCCcccEEEEe
Confidence 999999999999999 999999999999864
No 399
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.57 E-value=3.1e-14 Score=88.52 Aligned_cols=86 Identities=20% Similarity=0.247 Sum_probs=71.2
Q ss_pred HHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHH
Q psy4991 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVS 95 (122)
Q Consensus 16 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 95 (122)
..+.+|+.++..+.|+++......+. .....+++|||++|++|.+.+..... ....++.+++.
T Consensus 44 ~~~~~E~~~l~~l~~~~i~~p~~~~~-~~~~~~lv~e~~~G~~L~~~~~~~~~----------------~~~~i~~~i~~ 106 (211)
T PRK14879 44 ERTRREARIMSRARKAGVNVPAVYFV-DPENFIIVMEYIEGEPLKDLINSNGM----------------EELELSREIGR 106 (211)
T ss_pred HHHHHHHHHHHHHHHCCCCCCeEEEE-eCCCCEEEEEEeCCcCHHHHHHhccH----------------HHHHHHHHHHH
Confidence 45778999999999998877776665 44567799999999999988764221 23788999999
Q ss_pred HHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 96 ALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 96 ~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
++.++|+.+ ++|+|++|+||+++
T Consensus 107 ~l~~lH~~~--i~H~Dl~p~Nil~~ 129 (211)
T PRK14879 107 LVGKLHSAG--IIHGDLTTSNMILS 129 (211)
T ss_pred HHHHHHhCC--cccCCCCcccEEEE
Confidence 999999999 99999999999985
No 400
>KOG0983|consensus
Probab=99.57 E-value=1.5e-15 Score=96.32 Aligned_cols=108 Identities=22% Similarity=0.272 Sum_probs=84.3
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|||.+....+...-.+++..+.++.+. +.|.||+++|+|. ....++++||.|. ..+..+++.- ..
T Consensus 120 iAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi-~n~dV~IcMelMs-~C~ekLlkri-----------k~ 186 (391)
T KOG0983|consen 120 IAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFI-TNTDVFICMELMS-TCAEKLLKRI-----------KG 186 (391)
T ss_pred EEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEe-eCchHHHHHHHHH-HHHHHHHHHh-----------cC
Confidence 4899998886666677888888877776 5899999999998 5556778999886 4555555432 23
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
++++..+-.+...++.++.||-.+ ..++|||+||+|||+|++
T Consensus 187 piPE~ilGk~tva~v~AL~YLKeK-H~viHRDvKPSNILlDe~ 228 (391)
T KOG0983|consen 187 PIPERILGKMTVAIVKALYYLKEK-HGVIHRDVKPSNILLDER 228 (391)
T ss_pred CchHHhhhhhHHHHHHHHHHHHHh-cceeecccCccceEEccC
Confidence 456666678899999999999886 449999999999999863
No 401
>KOG1006|consensus
Probab=99.57 E-value=6.5e-16 Score=97.50 Aligned_cols=112 Identities=24% Similarity=0.274 Sum_probs=85.3
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+|||.+.....+...++++.|.+...+- +.|||+++||++. +.+..|++||.|. .++..+-+.-.... ..
T Consensus 92 mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F-~EGdcWiCMELMd-~SlDklYk~vy~vq-------~~ 162 (361)
T KOG1006|consen 92 MAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALF-SEGDCWICMELMD-ISLDKLYKRVYSVQ-------KS 162 (361)
T ss_pred EEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhh-cCCceeeeHHHHh-hhHHHHHHHHHHHH-------hc
Confidence 5899998876666778888888866665 7899999999998 6677889999997 77765544311110 12
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
.+++..+-.+....+.++.||-.. ..++|||+||+|||+++.
T Consensus 163 ~ipE~Ilg~ItvatV~AL~yLK~~-lkiIHRDvKPSNILldr~ 204 (361)
T KOG1006|consen 163 RIPENILGHITVATVDALDYLKEE-LKIIHRDVKPSNILLDRH 204 (361)
T ss_pred cCcHhhhhheeeeehhHHHHHHHH-hhhhhccCChhheEEecC
Confidence 445555567778888999999775 449999999999999863
No 402
>KOG0695|consensus
Probab=99.56 E-value=5.6e-15 Score=96.38 Aligned_cols=106 Identities=25% Similarity=0.364 Sum_probs=86.3
Q ss_pred CeeeeccCCC-CC-cchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNL-NL-PFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~-~~-~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
+|+|++++.. +. .+..=...|-.+..+. +||.++.+..+|+ +...+++|.||.+||+|.--+...+.+++..+
T Consensus 278 yamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfq-tesrlffvieyv~ggdlmfhmqrqrklpeeha--- 353 (593)
T KOG0695|consen 278 YAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQ-TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA--- 353 (593)
T ss_pred eehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhc-ccceEEEEEEEecCcceeeehhhhhcCcHHHh---
Confidence 4778887652 11 1223334677777777 7999999999998 77788899999999999888877766666666
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+..+|+.++.|||+.| |+.||||..|+|++.
T Consensus 354 ---------rfys~ei~lal~flh~rg--iiyrdlkldnvllda 386 (593)
T KOG0695|consen 354 ---------RFYSAEICLALNFLHERG--IIYRDLKLDNVLLDA 386 (593)
T ss_pred ---------hhhhHHHHHHHHHHhhcC--eeeeeccccceEEcc
Confidence 889999999999999999 999999999999974
No 403
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.53 E-value=4.8e-14 Score=98.48 Aligned_cols=83 Identities=19% Similarity=0.178 Sum_probs=70.9
Q ss_pred hHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHH
Q psy4991 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVV 94 (122)
Q Consensus 15 ~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 94 (122)
.+.+.+|++++..++|++++.....+. +....+++|||+++++|.+++.. . ..++.+++
T Consensus 380 ~~~~~~E~~~l~~l~~~~i~~p~~~~~-~~~~~~lv~E~~~g~~L~~~l~~--------~------------~~~~~~i~ 438 (535)
T PRK09605 380 TERTRAEARLLSEARRAGVPTPVIYDV-DPEEKTIVMEYIGGKDLKDVLEG--------N------------PELVRKVG 438 (535)
T ss_pred HHHHHHHHHHHHhhcccCCCeeEEEEE-eCCCCEEEEEecCCCcHHHHHHH--------H------------HHHHHHHH
Confidence 356789999999999999988776665 44556799999999999888752 1 57899999
Q ss_pred HHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 95 SALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 95 ~~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
.++.++|+.+ ++|||+||+||+++
T Consensus 439 ~~L~~lH~~g--iiHrDlkp~NILl~ 462 (535)
T PRK09605 439 EIVAKLHKAG--IVHGDLTTSNFIVR 462 (535)
T ss_pred HHHHHHHhCC--CccCCCChHHEEEE
Confidence 9999999999 99999999999984
No 404
>KOG0664|consensus
Probab=99.53 E-value=2.7e-16 Score=99.89 Aligned_cols=94 Identities=23% Similarity=0.404 Sum_probs=73.8
Q ss_pred chHHHHHHHHHHhhCCCCCccceeeeeeeCC----CeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHH
Q psy4991 14 FPRHALREYNIHKALDHPRVVKLYDVFEIDA----NSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSI 89 (122)
Q Consensus 14 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (122)
...++.+|+.+|..++|.|+++..+..+... ..+|++.|.|. .+|..++-.. +.+..+.+.-+
T Consensus 95 s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQ-SDLHKIIVSP------------Q~Ls~DHvKVF 161 (449)
T KOG0664|consen 95 SCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQ-SDLHKIIVSP------------QALTPDHVKVF 161 (449)
T ss_pred HHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHH-hhhhheeccC------------CCCCcchhhhh
Confidence 4577889999999999999999998875111 13566777776 5666555443 34555566899
Q ss_pred HHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 90 VMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 90 ~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
.+||++|+.|||+.+ |+||||||.|+|++++
T Consensus 162 lYQILRGLKYLHsA~--ILHRDIKPGNLLVNSN 192 (449)
T KOG0664|consen 162 VYQILRGLKYLHTAN--ILHRDIKPGNLLVNSN 192 (449)
T ss_pred HHHHHhhhHHHhhcc--hhhccCCCccEEeccC
Confidence 999999999999999 9999999999998764
No 405
>KOG1167|consensus
Probab=99.53 E-value=9e-14 Score=91.93 Aligned_cols=100 Identities=20% Similarity=0.310 Sum_probs=82.9
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|.+... ....++.+|+++|..+ .+.||+.+.+++. ..+...+|+||++..+..++...-
T Consensus 67 valk~i~~t---s~p~ri~~El~~L~~~gG~~ni~~~~~~~r-nnd~v~ivlp~~~H~~f~~l~~~l------------- 129 (418)
T KOG1167|consen 67 VALKAIYRT---SSPSRILNELEMLYRLGGSDNIIKLNGCFR-NNDQVAIVLPYFEHDRFRDLYRSL------------- 129 (418)
T ss_pred Eeeeecccc---cCchHHHHHHHHHHHhccchhhhcchhhhc-cCCeeEEEecccCccCHHHHHhcC-------------
Confidence 466666544 2457899999999999 6899999999998 778889999999988877776542
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
....+..+++.+..+|.++|.+| |+|||+||+|++.+.
T Consensus 130 --~~~~i~~Yl~~ll~Al~~~h~~G--IvHRDiKpsNFL~n~ 167 (418)
T KOG1167|consen 130 --SLAEIRWYLRNLLKALAHLHKNG--IVHRDIKPSNFLYNR 167 (418)
T ss_pred --CHHHHHHHHHHHHHHhhhhhccC--ccccCCCcccccccc
Confidence 22344889999999999999999 999999999999763
No 406
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.53 E-value=1.2e-13 Score=85.15 Aligned_cols=83 Identities=14% Similarity=0.177 Sum_probs=66.1
Q ss_pred HHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHH
Q psy4991 16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVS 95 (122)
Q Consensus 16 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 95 (122)
.++.+|++++..+.++++......+. .....+++|||++|++|.+.+.... ..++.+++.
T Consensus 42 ~~~~~E~~~l~~l~~~~i~~p~~~~~-~~~~~~lv~e~~~g~~l~~~~~~~~-------------------~~~~~~i~~ 101 (199)
T TIGR03724 42 ERTRNEARLLSRARKAGVNTPVVYDV-DPDNKTIVMEYIEGKPLKDVIEEGN-------------------DELLREIGR 101 (199)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEE-ECCCCEEEEEEECCccHHHHHhhcH-------------------HHHHHHHHH
Confidence 55678999999998877655544444 3445679999999999988765421 157889999
Q ss_pred HHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 96 ALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 96 ~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
++.++|+.+ ++|+|++|+||+++
T Consensus 102 ~l~~lH~~g--i~H~Dl~~~Nil~~ 124 (199)
T TIGR03724 102 LVGKLHKAG--IVHGDLTTSNIIVR 124 (199)
T ss_pred HHHHHHHCC--eecCCCCcceEEEE
Confidence 999999999 99999999999985
No 407
>KOG0670|consensus
Probab=99.52 E-value=3.5e-14 Score=96.73 Aligned_cols=107 Identities=27% Similarity=0.371 Sum_probs=87.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCC------CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALD------HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 74 (122)
||||++..+ +.....=++|+++|.++. --+++.++..|. -.+.+|||+|.+. -.|...++.-+.
T Consensus 460 vAiKIIRnN--E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~-hknHLClVFE~Ls-lNLRevLKKyG~------ 529 (752)
T KOG0670|consen 460 VAIKIIRNN--EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK-HKNHLCLVFEPLS-LNLREVLKKYGR------ 529 (752)
T ss_pred eEEEEeecc--hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh-hcceeEEEehhhh-chHHHHHHHhCc------
Confidence 799999988 444556678999999984 237889999998 7789999999997 899999987543
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
--.+....+..|+.|+..+|..|-.++ ++|.||||.|||+.++
T Consensus 530 ---nvGL~ikaVRsYaqQLflALklLK~c~--vlHaDIKPDNiLVNE~ 572 (752)
T KOG0670|consen 530 ---NVGLHIKAVRSYAQQLFLALKLLKKCG--VLHADIKPDNILVNES 572 (752)
T ss_pred ---ccceeehHHHHHHHHHHHHHHHHHhcC--eeecccCccceEeccC
Confidence 123444556899999999999999999 9999999999999753
No 408
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.49 E-value=2.6e-13 Score=84.01 Aligned_cols=79 Identities=23% Similarity=0.141 Sum_probs=62.7
Q ss_pred HHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHH
Q psy4991 17 HALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVS 95 (122)
Q Consensus 17 ~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 95 (122)
.+.+|+++|+++. +++++.++++ ...+++|||+.|.+|.+.... . . ..++.|++.
T Consensus 47 l~~rE~~iL~~L~~~~~vP~ll~~-----~~~~lvmeyI~G~~L~~~~~~-~------~------------~~~~~qi~~ 102 (218)
T PRK12274 47 LARREALALRQLDGLPRTPRLLHW-----DGRHLDRSYLAGAAMYQRPPR-G------D------------LAYFRAARR 102 (218)
T ss_pred HHHHHHHHHHhcCCCCCCCEEEEE-----cCEEEEEeeecCccHHhhhhh-h------h------------HHHHHHHHH
Confidence 5789999999994 5788888774 225799999998888643321 0 1 356789999
Q ss_pred HHHHHHcCCCCeeeeCC-CCCCccccc
Q psy4991 96 ALKYLNEIKPPVIHYDL-KPGKPLFLF 121 (122)
Q Consensus 96 ~l~~lh~~~~~i~h~dl-k~~nill~~ 121 (122)
++.++|+.| ++|+|| ||+||+++.
T Consensus 103 ~L~~lH~~G--IvHrDL~kp~NILv~~ 127 (218)
T PRK12274 103 LLQQLHRCG--VAHNDLAKEANWLVQE 127 (218)
T ss_pred HHHHHHHCc--CccCCCCCcceEEEcC
Confidence 999999999 999999 799999964
No 409
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.49 E-value=1.5e-13 Score=87.22 Aligned_cols=88 Identities=15% Similarity=0.152 Sum_probs=65.7
Q ss_pred hHHHHHHHHHHhhCCCCCc--cceeeeeeeCCC---eEEEEEeccCC-CCHHHHHHhccchhHHhhhhcCCCCChHHHHH
Q psy4991 15 PRHALREYNIHKALDHPRV--VKLYDVFEIDAN---SFCTVLEYCDG-HDLDFYLKQHKTIAEREARCLSQPYLSTSARS 88 (122)
Q Consensus 15 ~~~~~~e~~~l~~~~h~~i--~~~~~~~~~~~~---~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (122)
...+.+|++++..+.|+++ +..++....... ..++++|+++| .+|.+++... .. . ..
T Consensus 84 ~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~-~l------------~----~~ 146 (239)
T PRK01723 84 RTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEA-PL------------S----EE 146 (239)
T ss_pred hhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC-CC------------C----HH
Confidence 4567889999999988775 566665432222 23589999996 6888877532 11 1 23
Q ss_pred HHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 89 IVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 89 ~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.+++.++.+||+.| ++|+|+||+|||++.
T Consensus 147 ~~~~i~~~l~~lH~~G--I~HrDlkp~NILv~~ 177 (239)
T PRK01723 147 QWQAIGQLIARFHDAG--VYHADLNAHNILLDP 177 (239)
T ss_pred HHHHHHHHHHHHHHCC--CCCCCCCchhEEEcC
Confidence 4678999999999999 999999999999974
No 410
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.48 E-value=4e-13 Score=87.39 Aligned_cols=84 Identities=19% Similarity=0.200 Sum_probs=61.6
Q ss_pred HHHhhCCCCCccceeeeeeeCCC---eEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHH
Q psy4991 23 NIHKALDHPRVVKLYDVFEIDAN---SFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKY 99 (122)
Q Consensus 23 ~~l~~~~h~~i~~~~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 99 (122)
..+..++|++++.+++++..... ..+++++++. .++...+..... .++..+..++.|++.|+.|
T Consensus 75 ~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------------~~~~~~~~i~~qi~~~l~~ 141 (294)
T PHA02882 75 KNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKC------------KNKKLIKNIMKDMLTTLEY 141 (294)
T ss_pred HHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhc-cCHHHHHHhhcc------------CCHHHHHHHHHHHHHHHHH
Confidence 34556789999999997752222 3456777765 566655543221 2344558899999999999
Q ss_pred HHcCCCCeeeeCCCCCCccccc
Q psy4991 100 LNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 100 lh~~~~~i~h~dlk~~nill~~ 121 (122)
||+.+ ++||||||+|||++.
T Consensus 142 lH~~~--iiHrDiKp~Nill~~ 161 (294)
T PHA02882 142 IHEHG--ISHGDIKPENIMVDG 161 (294)
T ss_pred HHhCC--eecCCCCHHHEEEcC
Confidence 99999 999999999999974
No 411
>KOG0576|consensus
Probab=99.48 E-value=7.7e-15 Score=101.96 Aligned_cols=104 Identities=18% Similarity=0.278 Sum_probs=83.5
Q ss_pred eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCC
Q psy4991 2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPY 81 (122)
Q Consensus 2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 81 (122)
|+|+++-..+. ...-...|+-+++.++|+||+.+++.+. ....++++||||.+|+|.++-.-.+.+
T Consensus 44 avkvVkLep~d-d~~~iqqei~~~~dc~h~nivay~gsyl-r~dklwicMEycgggslQdiy~~Tgpl------------ 109 (829)
T KOG0576|consen 44 AVKVVKLEPGD-DFSGIQQEIGMLRDCRHPNIVAYFGSYL-RRDKLWICMEYCGGGSLQDIYHVTGPL------------ 109 (829)
T ss_pred hheeeeccCCc-cccccccceeeeecCCCcChHHHHhhhh-hhcCcEEEEEecCCCcccceeeecccc------------
Confidence 67777655222 3455567888899999999999999998 667788999999999998765433333
Q ss_pred ChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 82 LSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 82 ~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.++-...+..++|+.|+|+.+ -+|||+|=.||++++
T Consensus 110 selqiayvcRetl~gl~ylhs~g--k~hRdiKGanilltd 147 (829)
T KOG0576|consen 110 SELQIAYVCRETLQGLKYLHSQG--KIHRDIKGANILLTD 147 (829)
T ss_pred hhHHHHHHHhhhhccchhhhcCC--cccccccccceeecc
Confidence 34455788999999999999999 999999999999975
No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.44 E-value=2e-12 Score=83.59 Aligned_cols=109 Identities=38% Similarity=0.550 Sum_probs=87.5
Q ss_pred CeeeeccCCCCCc--chHHHHHHHHHHhhCCCC-CccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNLNLP--FPRHALREYNIHKALDHP-RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~~~~--~~~~~~~e~~~l~~~~h~-~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
+|+|.+....... ..+.+.+|+..++.+.|+ +++.+...+. .....+++++++.++++..++......
T Consensus 25 ~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~-------- 95 (384)
T COG0515 25 VALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQ-DEGSLYLVMEYVDGGSLEDLLKKIGRK-------- 95 (384)
T ss_pred EEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEe-cCCEEEEEEecCCCCcHHHHHHhcccc--------
Confidence 3677777664333 478899999999999888 7999999996 666678999999999999666653210
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+.+.....++.|++.++.++|..+ ++|||+||+||+++.
T Consensus 96 -~~~~~~~~~~~~~~~~~~l~~~H~~~--~~hrd~kp~nil~~~ 136 (384)
T COG0515 96 -GPLSESEALFILAQILSALEYLHSKG--IIHRDIKPENILLDR 136 (384)
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeecC
Confidence 23445556899999999999999999 999999999999874
No 413
>KOG1024|consensus
Probab=99.41 E-value=7.5e-13 Score=87.80 Aligned_cols=113 Identities=16% Similarity=0.090 Sum_probs=91.2
Q ss_pred eeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCC
Q psy4991 3 AKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYL 82 (122)
Q Consensus 3 vK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 82 (122)
+|..++..++-....++.|.-++..+.|||+.++.+++..+....++++.++.-|+|..|+...+......+ +.+.
T Consensus 319 vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~a----qtvt 394 (563)
T KOG1024|consen 319 VKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYA----QTVT 394 (563)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccc----cchh
Confidence 455555555556677788888888999999999999997677788889999999999999986654332222 3444
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 83 STSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 83 ~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
--+...++.|++.|+.|||..+ ++|.||..+|.++++
T Consensus 395 t~qlV~masQla~am~hlh~~~--ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 395 TIQLVLMASQLAMAMEHLHNHG--VIHKDIAARNCVIDD 431 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--cccchhhhhcceehh
Confidence 4567899999999999999999 999999999999975
No 414
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.40 E-value=1.2e-12 Score=92.08 Aligned_cols=77 Identities=17% Similarity=0.181 Sum_probs=55.0
Q ss_pred CCCeEEEEEeccCCCCHHHHHHhccch-h--HHhhh----h-cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCC
Q psy4991 43 DANSFCTVLEYCDGHDLDFYLKQHKTI-A--EREAR----C-LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114 (122)
Q Consensus 43 ~~~~~~lv~e~~~~~~L~~~l~~~~~~-~--~~~~~----~-~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~ 114 (122)
.....++++||+.+++|.+++...... . ..... . .........+..++.|++.|+.|||+.+ |+||||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g--IiHRDLKP 283 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG--IVHRDVKP 283 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC--EEeCcCCH
Confidence 456788999999999999998753211 0 00000 0 0001123456689999999999999999 99999999
Q ss_pred CCccccc
Q psy4991 115 GKPLFLF 121 (122)
Q Consensus 115 ~nill~~ 121 (122)
+|||++.
T Consensus 284 ~NILl~~ 290 (566)
T PLN03225 284 QNIIFSE 290 (566)
T ss_pred HHEEEeC
Confidence 9999974
No 415
>smart00090 RIO RIO-like kinase.
Probab=99.39 E-value=1.3e-12 Score=82.89 Aligned_cols=87 Identities=15% Similarity=0.098 Sum_probs=60.1
Q ss_pred HHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHH
Q psy4991 18 ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSAL 97 (122)
Q Consensus 18 ~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 97 (122)
+.+|++++..+.+.. +.+...+. .. ..+++|||++++++.......... .......++.|++.++
T Consensus 97 ~~~E~~~L~~L~~~~-i~~p~~~~-~~-~~~lV~E~~~g~~L~~~~~~~~~~------------~~~~~~~i~~qi~~~l 161 (237)
T smart00090 97 AEKEFRNLQRLYEAG-VPVPKPIA-WR-RNVLVMEFIGGDGLPAPRLKDVEP------------EEEEEFELYDDILEEM 161 (237)
T ss_pred HHHHHHHHHHHHhcC-CCCCeeeE-ec-CceEEEEEecCCcccccccccCCc------------chHHHHHHHHHHHHHH
Confidence 468999999996532 22222232 11 246999999987776543222211 2233478899999999
Q ss_pred HHHHcCCCCeeeeCCCCCCcccc
Q psy4991 98 KYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 98 ~~lh~~~~~i~h~dlk~~nill~ 120 (122)
.++|+.+ .++|+|+||+||+++
T Consensus 162 ~~LH~~g-~iiH~Dikp~NIli~ 183 (237)
T smart00090 162 RKLYKEG-ELVHGDLSEYNILVH 183 (237)
T ss_pred HHHHhcC-CEEeCCCChhhEEEE
Confidence 9999973 499999999999986
No 416
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.37 E-value=2.5e-13 Score=98.62 Aligned_cols=81 Identities=19% Similarity=0.225 Sum_probs=61.9
Q ss_pred hhCCC-CCccceeeeeee------CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHH
Q psy4991 26 KALDH-PRVVKLYDVFEI------DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALK 98 (122)
Q Consensus 26 ~~~~h-~~i~~~~~~~~~------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 98 (122)
+..+| +||..+.+.+.. ....++.++||+. ++|.+++.... ..+.+..++.++.|++.||.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~-----------~~~~~~~~~~i~~qi~~al~ 94 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNPD-----------RSVDAFECFHVFRQIVEIVN 94 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhccc-----------ccccHHHHHHHHHHHHHHHH
Confidence 44556 577777777721 1235667888885 79999986421 23555666999999999999
Q ss_pred HHHcCCCCeeeeCCCCCCcccc
Q psy4991 99 YLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 99 ~lh~~~~~i~h~dlk~~nill~ 120 (122)
|||+++ |+||||||+|||++
T Consensus 95 ~lH~~g--IvHrDlKP~NiLl~ 114 (793)
T PLN00181 95 AAHSQG--IVVHNVRPSCFVMS 114 (793)
T ss_pred HHHhCC--eeeccCCchhEEEc
Confidence 999999 99999999999995
No 417
>KOG1163|consensus
Probab=99.37 E-value=5.4e-12 Score=79.19 Aligned_cols=102 Identities=16% Similarity=0.201 Sum_probs=78.6
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||+|+-+.... ...+..|..+...++ ...|..+..+.. +...-.+||+.+. .+|.+++..+..
T Consensus 43 VAiK~Es~~a~---hpqL~yEskvY~iL~~g~GiP~i~~y~~-e~~ynvlVMdLLG-PsLEdLfnfC~R----------- 106 (341)
T KOG1163|consen 43 VAIKLESSKAK---HPQLLYESKVYRILQGGVGIPHIRHYGT-EKDYNVLVMDLLG-PSLEDLFNFCSR----------- 106 (341)
T ss_pred EEEEeecccCC---CcchhHHHHHHHHhccCCCCchhhhhcc-ccccceeeeeccC-ccHHHHHHHHhh-----------
Confidence 67887665532 244677888888885 457777777776 6666779999985 899998876422
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
.+.-+.++.++.|++.-++|+|..+ ++||||||+|+|..
T Consensus 107 ~ftmkTvLMLaDQml~RiEyvH~r~--fiHRDIKPdNFLMG 145 (341)
T KOG1163|consen 107 RFTMKTVLMLADQMLSRIEYVHLRN--FIHRDIKPDNFLMG 145 (341)
T ss_pred hhhHHhHHHHHHHHHHHHHHHHhhc--cccccCCccceeec
Confidence 2333445999999999999999999 99999999999874
No 418
>KOG1164|consensus
Probab=99.37 E-value=5.3e-12 Score=83.32 Aligned_cols=106 Identities=21% Similarity=0.165 Sum_probs=79.1
Q ss_pred eeeeccCCCCCcchHHHHHHHHHHhhCC----CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 2 CAKLLTTNLNLPFPRHALREYNIHKALD----HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 2 avK~~~~~~~~~~~~~~~~e~~~l~~~~----h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
|+|+.......... .+..|..++..+. ..++..+++........-++||+.+. .+|.++.....
T Consensus 48 a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~G-~sL~dl~~~~~---------- 115 (322)
T KOG1164|consen 48 AKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLLG-PSLEDLRKRNP---------- 115 (322)
T ss_pred EEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEeccC-ccHHHHHHhCC----------
Confidence 56666554222222 6778888888886 25888888877325667789999885 89999876533
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
...+....+..++.|++.++.++|+.| ++|||+||+|+.+..
T Consensus 116 ~~~fs~~T~l~ia~q~l~~l~~lH~~G--~iHRDiKp~N~~~g~ 157 (322)
T KOG1164|consen 116 PGRFSRKTVLRIAIQNLNALEDLHSKG--FIHRDIKPENFVVGQ 157 (322)
T ss_pred CCCcCHhHHHHHHHHHHHHHHHHHhcC--cccCCcCHHHeeecC
Confidence 133444555999999999999999999 999999999999864
No 419
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.35 E-value=2.6e-12 Score=79.32 Aligned_cols=80 Identities=25% Similarity=0.215 Sum_probs=59.6
Q ss_pred HHHHHHHHHhhCCCCC--ccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHH
Q psy4991 17 HALREYNIHKALDHPR--VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVV 94 (122)
Q Consensus 17 ~~~~e~~~l~~~~h~~--i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 94 (122)
...+|..++..+.+++ ++.+++ ....+++|||+++++|...... .....++.+++
T Consensus 79 ~~~~E~~~l~~l~~~~i~v~~~~~-----~~~~~lv~e~~~g~~L~~~~~~------------------~~~~~~~~~i~ 135 (198)
T cd05144 79 AAQKEFAALKALYEEGFPVPKPID-----WNRHAVVMEYIDGVELYRVRVL------------------EDPEEVLDEIL 135 (198)
T ss_pred HHHHHHHHHHHHHHcCCCCCceee-----cCCceEEEEEeCCcchhhcccc------------------ccHHHHHHHHH
Confidence 3567888888887764 333333 2334799999999888654321 11256788999
Q ss_pred HHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 95 SALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 95 ~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.++.++|+.+ ++|+|++|+||+++.
T Consensus 136 ~~l~~lh~~g--i~H~Dl~p~Nill~~ 160 (198)
T cd05144 136 EEIVKAYKHG--IIHGDLSEFNILVDD 160 (198)
T ss_pred HHHHHHHHCC--CCcCCCCcccEEEcC
Confidence 9999999998 999999999999974
No 420
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.34 E-value=7.1e-12 Score=73.45 Aligned_cols=98 Identities=23% Similarity=0.224 Sum_probs=72.7
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCC--CCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDH--PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 78 (122)
+++|....... ...+.+|...++.+++ .+++.++.... ..+..++++||+.++++..+ ..
T Consensus 24 ~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~-~~~~~~~v~e~~~g~~~~~~-------~~------- 85 (155)
T cd05120 24 YVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGE-SDGWSYLLMEWIEGETLDEV-------SE------- 85 (155)
T ss_pred EEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcC-CCCccEEEEEecCCeecccC-------CH-------
Confidence 35666654422 4678899999999965 58888888776 55678899999997767543 11
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCC-CCeeeeCCCCCCccccc
Q psy4991 79 QPYLSTSARSIVMQVVSALKYLNEIK-PPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 79 ~~~~~~~~~~~~~~i~~~l~~lh~~~-~~i~h~dlk~~nill~~ 121 (122)
.....++.+++.++..+|... .+++|+|++|+||+++.
T Consensus 86 -----~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~ 124 (155)
T cd05120 86 -----EEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD 124 (155)
T ss_pred -----HHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC
Confidence 112567889999999999841 23999999999999864
No 421
>KOG1165|consensus
Probab=99.25 E-value=6.2e-11 Score=77.43 Aligned_cols=103 Identities=17% Similarity=0.202 Sum_probs=80.8
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
||||.-+..+ .+..+..|.+..+.+ .-++|..+|..-. .+..-.||+|.+. .+|.++++-++.
T Consensus 56 VAIKfEPrkS---~APQLrdEYr~YKlL~g~~GIP~vYYFGq-eG~~NiLVidLLG-PSLEDLFD~CgR----------- 119 (449)
T KOG1165|consen 56 VAIKFEPRKS---EAPQLRDEYRTYKLLGGTEGIPQVYYFGQ-EGKYNILVIDLLG-PSLEDLFDLCGR----------- 119 (449)
T ss_pred EEEEeccccC---CcchHHHHHHHHHHHcCCCCCCceeeecc-ccchhhhhhhhhC-cCHHHHHHHhcC-----------
Confidence 6888766553 234566778777777 5789988887666 6666678999885 999999875432
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+..+.+..++.|++.-+.++|++. ++.||+||+|+||.+
T Consensus 120 ~FSvKTV~miA~Qmi~rie~vH~k~--LIYRDIKPdNFLIGr 159 (449)
T KOG1165|consen 120 RFSVKTVAMIAKQMITRIEYVHEKD--LIYRDIKPDNFLIGR 159 (449)
T ss_pred cccHHhHHHHHHHHHHHHHHHHhcc--eeecccCccceeecC
Confidence 3444455999999999999999999 999999999999974
No 422
>KOG4158|consensus
Probab=99.15 E-value=5.8e-11 Score=79.32 Aligned_cols=76 Identities=26% Similarity=0.395 Sum_probs=61.4
Q ss_pred CCCCccceeeeeeeC--------------------------CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCC
Q psy4991 29 DHPRVVKLYDVFEID--------------------------ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYL 82 (122)
Q Consensus 29 ~h~~i~~~~~~~~~~--------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 82 (122)
+||||+.+.++|.++ +..+|++|.... .+|.+++..+.. +..
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~~-s~r---------- 341 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRHR-SYR---------- 341 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCCC-chH----------
Confidence 799999999988522 246889999887 899999986322 222
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 83 STSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 83 ~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
....++.|+++++.|||..+ +.|||+|.+|||+.
T Consensus 342 --~~~~~laQlLEav~hL~~hg--vAhRDlKSDNiL~E 375 (598)
T KOG4158|consen 342 --TGRVILAQLLEAVTHLHKHG--VAHRDLKSDNILLE 375 (598)
T ss_pred --HHHHHHHHHHHHHHHHHHcc--chhhcccccceEEE
Confidence 22678999999999999999 99999999999984
No 423
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.14 E-value=1.7e-10 Score=70.41 Aligned_cols=80 Identities=23% Similarity=0.285 Sum_probs=51.5
Q ss_pred HHHHHHhhCCCCC--ccceeeeeeeCCCeEEEEEeccCCCCHHH-HHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHH
Q psy4991 20 REYNIHKALDHPR--VVKLYDVFEIDANSFCTVLEYCDGHDLDF-YLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSA 96 (122)
Q Consensus 20 ~e~~~l~~~~h~~--i~~~~~~~~~~~~~~~lv~e~~~~~~L~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 96 (122)
.|.+.+..+.+.. +..+++. ...++++||++++++.. .+... ... .....++.+++.+
T Consensus 66 ~e~~~l~~l~~~~~~~~~~~~~-----~~~~lv~e~~~g~~~~~~~l~~~-~~~-------------~~~~~~~~~~~~~ 126 (187)
T cd05119 66 KEFRNLKRLYEAGVPVPKPIDL-----NRHVLVMEFIGGDGIPAPRLKDV-RLL-------------EDPEELYDQILEL 126 (187)
T ss_pred HHHHHHHHHHHcCCCCCceEec-----CCCEEEEEEeCCCCccChhhhhh-hhc-------------ccHHHHHHHHHHH
Confidence 4555555553332 3333332 22479999999754321 11110 000 2337889999999
Q ss_pred HHHHHc-CCCCeeeeCCCCCCcccc
Q psy4991 97 LKYLNE-IKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 97 l~~lh~-~~~~i~h~dlk~~nill~ 120 (122)
+.++|. .+ ++|+|++|+||+++
T Consensus 127 l~~lh~~~~--ivH~Dl~p~Nili~ 149 (187)
T cd05119 127 MRKLYREAG--LVHGDLSEYNILVD 149 (187)
T ss_pred HHHHhhccC--cCcCCCChhhEEEE
Confidence 999999 88 99999999999986
No 424
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.11 E-value=7.2e-10 Score=67.23 Aligned_cols=85 Identities=19% Similarity=0.158 Sum_probs=66.5
Q ss_pred hHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHH
Q psy4991 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVV 94 (122)
Q Consensus 15 ~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 94 (122)
..+..+|+.++.++.--.|....-... +.....++|||.+|..|.+.+.... ..++..+-
T Consensus 43 r~Rt~~Earil~~a~~~GV~~P~v~dv-D~~~~~I~me~I~G~~lkd~l~~~~-------------------~~~~r~vG 102 (204)
T COG3642 43 RERTRREARILAKAREAGVPVPIVYDV-DPDNGLIVMEYIEGELLKDALEEAR-------------------PDLLREVG 102 (204)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCeEEEE-cCCCCEEEEEEeCChhHHHHHHhcc-------------------hHHHHHHH
Confidence 467788999999986656655544444 5666678999999888887887541 35677777
Q ss_pred HHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 95 SALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 95 ~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.-+.-||..+ ++|+||.++||++..
T Consensus 103 ~~vg~lH~~g--ivHGDLTtsNiIl~~ 127 (204)
T COG3642 103 RLVGKLHKAG--IVHGDLTTSNIILSG 127 (204)
T ss_pred HHHHHHHhcC--eecCCCccceEEEeC
Confidence 8899999999 999999999999864
No 425
>KOG0590|consensus
Probab=99.06 E-value=6e-11 Score=83.86 Aligned_cols=86 Identities=26% Similarity=0.445 Sum_probs=66.5
Q ss_pred HHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHH
Q psy4991 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKY 99 (122)
Q Consensus 20 ~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 99 (122)
.|.-+-..+.|+|++.....+. +.....-.||||++ +|..++...+.+..... ..++.|++.|+.|
T Consensus 370 sE~~i~~~l~h~~~~e~l~~~~-~~~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~------------~c~fKqL~~Gv~y 435 (601)
T KOG0590|consen 370 SEFCIGSSLSHPNIIETLDIVQ-EIDGILQSMEYCPY-DLFSLVMSNGKLTPLEA------------DCFFKQLLRGVKY 435 (601)
T ss_pred hheeecccccCCchhhhHHHHh-hcccchhhhhcccH-HHHHHHhcccccchhhh------------hHHHHHHHHHHHH
Confidence 3444445678999988777776 33333334999997 99999887544444444 7899999999999
Q ss_pred HHcCCCCeeeeCCCCCCccccc
Q psy4991 100 LNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 100 lh~~~~~i~h~dlk~~nill~~ 121 (122)
+|+.| +.|||+|++|++++.
T Consensus 436 ~h~~G--iahrdlK~enll~~~ 455 (601)
T KOG0590|consen 436 LHSMG--LAHRDLKLENLLVTE 455 (601)
T ss_pred HHhcC--ceeccCccccEEEec
Confidence 99999 999999999999875
No 426
>KOG1166|consensus
Probab=99.05 E-value=3.1e-10 Score=83.06 Aligned_cols=74 Identities=20% Similarity=0.203 Sum_probs=57.8
Q ss_pred ccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCC
Q psy4991 33 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112 (122)
Q Consensus 33 i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dl 112 (122)
|..+..+.. -.+.-++++||.+.|+|.+++...+...+..+ ..++.|++..+..||..+ |+|+||
T Consensus 756 ~~~~~~a~~-~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv------------~~~~~qml~ive~lH~~~--IIHgDi 820 (974)
T KOG1166|consen 756 IMHISSAHV-FQNASVLVSEYSPYGTLLDLINTNKVMDEYLV------------MFFSCQMLRIVEHLHAMG--IIHGDI 820 (974)
T ss_pred hHHHHHHHc-cCCcceeeeeccccccHHHhhccCCCCCchhh------------hHHHHHHHHHHHHHHhcc--eecccC
Confidence 444444443 23444589999999999999985554444444 899999999999999999 999999
Q ss_pred CCCCccccc
Q psy4991 113 KPGKPLFLF 121 (122)
Q Consensus 113 k~~nill~~ 121 (122)
||+|+||..
T Consensus 821 KPDNfll~~ 829 (974)
T KOG1166|consen 821 KPDNFLLRR 829 (974)
T ss_pred CcceeEeec
Confidence 999999864
No 427
>KOG0195|consensus
Probab=99.05 E-value=6.3e-11 Score=75.82 Aligned_cols=108 Identities=13% Similarity=0.272 Sum_probs=78.7
Q ss_pred eeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCC
Q psy4991 3 AKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPY 81 (122)
Q Consensus 3 vK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 81 (122)
+|++.-. .+.....+|..|..-|+.+.||||+.+.++|. ++..+.++..||+.|+|...+.+....-.
T Consensus 218 akil~vr~~t~risrdfneefp~lrifshpnilpvlgacn-sppnlv~isq~mp~gslynvlhe~t~vvv---------- 286 (448)
T KOG0195|consen 218 AKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACN-SPPNLVIISQYMPFGSLYNVLHEQTSVVV---------- 286 (448)
T ss_pred hhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhcc-CCCCceEeeeeccchHHHHHHhcCccEEE----------
Confidence 3444432 33445677888888889999999999999998 77778899999999999999976543211
Q ss_pred ChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 82 LSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 82 ~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.-.+...++..++.|+.|||+..+-+.---|....+++++
T Consensus 287 d~sqav~faldiargmaflhslep~ipr~~lns~hvmide 326 (448)
T KOG0195|consen 287 DHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDE 326 (448)
T ss_pred ecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecc
Confidence 1123488999999999999997543433445555666654
No 428
>KOG3087|consensus
Probab=99.03 E-value=1.8e-09 Score=65.62 Aligned_cols=95 Identities=13% Similarity=0.107 Sum_probs=68.6
Q ss_pred chHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCC-CCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHH
Q psy4991 14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQ 92 (122)
Q Consensus 14 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (122)
..++..+|++.+.++.--+|.-..-.+. +...-.+.|||.+| -++.+++...-... ..+.....++..
T Consensus 53 tr~Rt~~Ear~l~k~~~~GI~~P~l~~~-D~~~~~i~ME~~~g~~~vk~~i~~~~~~~----------~~d~~~~~~~~~ 121 (229)
T KOG3087|consen 53 TRKRTKQEARLLAKCRALGIPAPRLIFI-DTYGGQIYMEFIDGASTVKDFILSTMEDE----------SEDEGLAELARR 121 (229)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEE-ecCCCeEEEEeccchhHHHHHHHHHccCc----------ccchhHHHHHHH
Confidence 4567788999999986656655544444 44555689999985 37777776543211 111222578889
Q ss_pred HHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 93 VVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 93 i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+-+.+.-||..+ ++|+||..+||++.+
T Consensus 122 iG~~igklH~nd--iiHGDLTTSNill~~ 148 (229)
T KOG3087|consen 122 IGELIGKLHDND--IIHGDLTTSNILLRS 148 (229)
T ss_pred HHHHHHHhhhCC--eecccccccceEEec
Confidence 999999999999 999999999999864
No 429
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.99 E-value=2.1e-09 Score=64.57 Aligned_cols=95 Identities=18% Similarity=0.123 Sum_probs=62.3
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCC-ccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPR-VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~-i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
+++|....... ......+|+..++.+...+ +..++.... ...+++|||++|.++... . ...
T Consensus 24 ~~lK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~P~~~~~~~---~~~~lv~e~i~G~~l~~~-~-------~~~----- 85 (170)
T cd05151 24 YVVRIPGNGTE--LLINRENEAENSKLAAEAGIGPKLYYFDP---ETGVLITEFIEGSELLTE-D-------FSD----- 85 (170)
T ss_pred EEEEeCCCCcc--cccCHHHHHHHHHHHHHhCCCCceEEEeC---CCCeEEEEecCCCccccc-c-------ccC-----
Confidence 35666554421 2345678888888885444 344544432 234689999998777532 0 000
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCC---CeeeeCCCCCCcccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKP---PVIHYDLKPGKPLFL 120 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~---~i~h~dlk~~nill~ 120 (122)
.....+++.++..||..+. .++|+|++|+||+++
T Consensus 86 -------~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~ 122 (170)
T cd05151 86 -------PENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD 122 (170)
T ss_pred -------HHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE
Confidence 3457789999999999751 259999999999986
No 430
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.94 E-value=3.1e-09 Score=72.94 Aligned_cols=88 Identities=18% Similarity=0.164 Sum_probs=52.6
Q ss_pred HHHHHHHHhhC----CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHH
Q psy4991 18 ALREYNIHKAL----DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQV 93 (122)
Q Consensus 18 ~~~e~~~l~~~----~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 93 (122)
+.+|++.+.++ ++.+-+.+...+..-....+++|||++|+++.+........ . ....++..+
T Consensus 200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~-----------~---~~~~ia~~~ 265 (437)
T TIGR01982 200 LRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG-----------L---DRKALAENL 265 (437)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC-----------C---CHHHHHHHH
Confidence 44555555554 23333343334421223457999999999998765431100 0 012344444
Q ss_pred HH-HHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 94 VS-ALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 94 ~~-~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+. .+..+|..| ++|+|++|+||++++
T Consensus 266 ~~~~l~ql~~~g--~~H~D~hPgNilv~~ 292 (437)
T TIGR01982 266 ARSFLNQVLRDG--FFHADLHPGNIFVLK 292 (437)
T ss_pred HHHHHHHHHhCC--ceeCCCCcccEEECC
Confidence 44 356778888 999999999999964
No 431
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.94 E-value=4.5e-09 Score=64.85 Aligned_cols=82 Identities=18% Similarity=0.214 Sum_probs=55.7
Q ss_pred HHHHHHhhCCC--CCccceeeeeeeCCCeEEEEEeccCCCCHH-HHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHH
Q psy4991 20 REYNIHKALDH--PRVVKLYDVFEIDANSFCTVLEYCDGHDLD-FYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSA 96 (122)
Q Consensus 20 ~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 96 (122)
+|.+.|+++.. .+++.++.. ...+++|||+.++.+. ..++. .. +.+.....+..+++.+
T Consensus 75 kE~r~L~rl~~~Gv~vP~pi~~-----~~~~lvME~Ig~~~~~~~~Lkd-~~------------~~~~~~~~i~~~i~~~ 136 (197)
T cd05146 75 KEMHNLKRMQKAGIPCPEVVVL-----KKHVLVMSFIGDDQVPAPKLKD-AK------------LNDEEMKNAYYQVLSM 136 (197)
T ss_pred HHHHHHHHHHHcCCCCCeEEEe-----cCCEEEEEEcCCCCccchhhhc-cc------------cCHHHHHHHHHHHHHH
Confidence 79999999843 456666653 2345899999754331 11221 11 1122335667899999
Q ss_pred HHHH-HcCCCCeeeeCCCCCCccccc
Q psy4991 97 LKYL-NEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 97 l~~l-h~~~~~i~h~dlk~~nill~~ 121 (122)
+..+ |..+ ++|+||++.||++..
T Consensus 137 l~~l~H~~g--lVHGDLs~~NIL~~~ 160 (197)
T cd05146 137 MKQLYKECN--LVHADLSEYNMLWHD 160 (197)
T ss_pred HHHHHHhCC--eecCCCCHHHEEEEC
Confidence 9988 7888 999999999999853
No 432
>KOG1243|consensus
Probab=98.92 E-value=8.4e-09 Score=72.59 Aligned_cols=90 Identities=22% Similarity=0.270 Sum_probs=71.2
Q ss_pred chHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHH
Q psy4991 14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQV 93 (122)
Q Consensus 14 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 93 (122)
..+...+-+..++.++||+|++++..+. ..+..|+|+|.+. .|..+++..+. ... .--+.||
T Consensus 52 ~~~~~~~A~k~lKtlRHP~Il~yL~t~e-~~~~~ylvTErV~--Pl~~~lk~l~~---~~v------------~~Gl~qI 113 (690)
T KOG1243|consen 52 VTELAKRAVKRLKTLRHPNILSYLDTTE-EEGTLYLVTERVR--PLETVLKELGK---EEV------------CLGLFQI 113 (690)
T ss_pred hhHHHHHHHHHhhhccCchhhhhhhhhc-ccCceEEEeeccc--cHHHHHHHhHH---HHH------------HHHHHHH
Confidence 3455677788999999999999999998 6678999999984 77777776442 111 4558999
Q ss_pred HHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 94 VSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 94 ~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
+.++.|||+. +.++|+++..+.++++.+
T Consensus 114 l~AL~FL~~d-~~lvHgNv~~~SVfVn~~ 141 (690)
T KOG1243|consen 114 LAALSFLNDD-CNLVHGNVCKDSVFVNES 141 (690)
T ss_pred HHHHHHHhcc-CCeeeccEeeeeEEEcCC
Confidence 9999999854 339999999999988753
No 433
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.88 E-value=1.8e-08 Score=65.11 Aligned_cols=93 Identities=17% Similarity=0.102 Sum_probs=64.8
Q ss_pred HHHHHHHHHhhCCCCCccc--eeeeeeeC----CCeEEEEEeccCCC-CHHHHHHhccchhHHhhhhcCCCCChHHHHHH
Q psy4991 17 HALREYNIHKALDHPRVVK--LYDVFEID----ANSFCTVLEYCDGH-DLDFYLKQHKTIAEREARCLSQPYLSTSARSI 89 (122)
Q Consensus 17 ~~~~e~~~l~~~~h~~i~~--~~~~~~~~----~~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (122)
.+.+|.+.+..+...+|.. +.++.... ....++|+|++++. +|.+++..... .+........+
T Consensus 74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~----------~~~~~~~~~~l 143 (268)
T PRK15123 74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWAT----------NPPDPRLKRML 143 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcc----------cCCCHHHHHHH
Confidence 4778999888885444433 33333211 23467999999865 78888753211 01112333688
Q ss_pred HHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 90 VMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 90 ~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+++..+.-||..| +.|+|++++|||++.
T Consensus 144 l~~la~~i~~LH~~G--i~HgDL~~~NiLl~~ 173 (268)
T PRK15123 144 IKRVATMVRDMHAAG--INHRDCYICHFLLHL 173 (268)
T ss_pred HHHHHHHHHHHHHCc--CccCCCChhhEEEec
Confidence 999999999999999 999999999999963
No 434
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.84 E-value=7.7e-08 Score=59.94 Aligned_cols=93 Identities=19% Similarity=0.179 Sum_probs=66.5
Q ss_pred hHHHHHHHHHHhhCCCC--CccceeeeeeeCC---CeEEEEEeccCC-CCHHHHHHhccchhHHhhhhcCCCCChHHHHH
Q psy4991 15 PRHALREYNIHKALDHP--RVVKLYDVFEIDA---NSFCTVLEYCDG-HDLDFYLKQHKTIAEREARCLSQPYLSTSARS 88 (122)
Q Consensus 15 ~~~~~~e~~~l~~~~h~--~i~~~~~~~~~~~---~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (122)
..++.+|...+..+... ..+.+.++..... ...++++|++++ .+|.+++......... ....
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~------------~~~~ 122 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPS------------QRRE 122 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchh------------hHHH
Confidence 45677888888877433 3445555544211 245789999986 4788888753222222 2267
Q ss_pred HHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 89 IVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 89 ~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
++.+++..+.-||..| +.|+|+++.|||++.
T Consensus 123 ll~~l~~~i~~lH~~g--i~H~Dl~~~NILv~~ 153 (206)
T PF06293_consen 123 LLRALARLIAKLHDAG--IYHGDLNPSNILVDP 153 (206)
T ss_pred HHHHHHHHHHHHHHCc--CCCCCCCcccEEEeC
Confidence 8999999999999999 999999999999975
No 435
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.81 E-value=1.7e-08 Score=70.68 Aligned_cols=87 Identities=16% Similarity=0.164 Sum_probs=48.4
Q ss_pred HHHHHHHHhhC----CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHH--HhccchhHHhhhhcCCCCChHHHHHHHH
Q psy4991 18 ALREYNIHKAL----DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL--KQHKTIAEREARCLSQPYLSTSARSIVM 91 (122)
Q Consensus 18 ~~~e~~~l~~~----~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (122)
+.+|+..+.++ .+.+.+.+..++.+-....+++|||+.|+++.++- ...+.... .+.+..+..++.
T Consensus 203 ~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~--------~la~~~v~~~~~ 274 (537)
T PRK04750 203 LMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMK--------LLAERGVEVFFT 274 (537)
T ss_pred HHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHH--------HHHHHHHHHHHH
Confidence 34455544444 24444444444431223456899999999997642 22221100 111222234444
Q ss_pred HHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 92 QVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 92 ~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
|+. ..| ++|+|++|+||+++.
T Consensus 275 Qif-------~~G--ffHaDpHPGNIlv~~ 295 (537)
T PRK04750 275 QVF-------RDG--FFHADMHPGNIFVSY 295 (537)
T ss_pred HHH-------hCC--eeeCCCChHHeEEec
Confidence 443 467 999999999999975
No 436
>KOG1240|consensus
Probab=98.79 E-value=2e-09 Score=79.37 Aligned_cols=104 Identities=19% Similarity=0.195 Sum_probs=73.2
Q ss_pred CeeeeccCCCCCcchHHHH---HHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991 1 MCAKLLTTNLNLPFPRHAL---REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~---~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 77 (122)
|.||++-+....-....+. +|+. ....++||.+.+--+.. ..+..||+-+|.- .+|.+.+..+.-+...+.
T Consensus 49 vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~-t~kAAylvRqyvk-hnLyDRlSTRPFL~~iEK--- 122 (1431)
T KOG1240|consen 49 VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLV-TDKAAYLVRQYVK-HNLYDRLSTRPFLVLIEK--- 122 (1431)
T ss_pred EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHH-hhHHHHHHHHHHh-hhhhhhhccchHHHHHHH---
Confidence 4678777664333334443 3444 45569999988876655 5555667777775 677777764333333333
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+-++.|++.|+.-+|..| +.|+|||.+|||+++
T Consensus 123 ---------kWiaFQLL~al~qcH~~g--VcHGDIKsENILiTS 155 (1431)
T KOG1240|consen 123 ---------KWIAFQLLKALSQCHKLG--VCHGDIKSENILITS 155 (1431)
T ss_pred ---------HHHHHHHHHHHHHHHHcC--ccccccccceEEEee
Confidence 567999999999999999 999999999999974
No 437
>KOG0603|consensus
Probab=98.77 E-value=2.8e-09 Score=74.19 Aligned_cols=105 Identities=23% Similarity=0.283 Sum_probs=83.0
Q ss_pred eeeeccCC-CCCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991 2 CAKLLTTN-LNLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79 (122)
Q Consensus 2 avK~~~~~-~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 79 (122)
|+|++++. ...+.......|-.++..++ |+.++.+..+++ .....+++.++..+|.+...+...........
T Consensus 26 amkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafq-t~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~----- 99 (612)
T KOG0603|consen 26 AMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQ-TDGKLYLILDFLRGGDLFTRLSKEVMFDELDV----- 99 (612)
T ss_pred hhhcccccccccccccccccHHHHHhhccCCCceeeeeeeec-cccchhHhhhhcccchhhhccccCCchHHHHH-----
Confidence 56666654 22223345666777888885 999999999998 66778899999999999888776555554444
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..+...++-++.++|+.+ ++++|+|++||+++.
T Consensus 100 -------~~~~aelaLald~lh~l~--iiyrd~k~enilld~ 132 (612)
T KOG0603|consen 100 -------AFYLAELALALDHLHKLG--IAYRDYKLENVLLLL 132 (612)
T ss_pred -------HHHHHHHHHHHhhcchhH--HHHhcccccceeecc
Confidence 778888999999999999 999999999999874
No 438
>KOG1266|consensus
Probab=98.76 E-value=6.7e-09 Score=68.14 Aligned_cols=89 Identities=24% Similarity=0.356 Sum_probs=68.9
Q ss_pred HhhCCCCCccceeeeeee----CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHH
Q psy4991 25 HKALDHPRVVKLYDVFEI----DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYL 100 (122)
Q Consensus 25 l~~~~h~~i~~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l 100 (122)
+.++.|.||+++..++.+ +.....++.|||..|++.++|+..... ...++.....+|..||..|+.||
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~--------~~a~~~~~wkkw~tqIlsal~yL 192 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN--------QKALFQKAWKKWCTQILSALSYL 192 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh--------hhhhhHHHHHHHHHHHHhhhhhh
Confidence 445579999999888862 223577899999999999999874331 11233344478999999999999
Q ss_pred HcCCCCeeeeCCCCCCccccc
Q psy4991 101 NEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 101 h~~~~~i~h~dlk~~nill~~ 121 (122)
|+..|+++|+++....|++..
T Consensus 193 hs~~PpiihgnlTc~tifiq~ 213 (458)
T KOG1266|consen 193 HSCDPPIIHGNLTCDTIFIQH 213 (458)
T ss_pred hccCCccccCCcchhheeecC
Confidence 999999999999988887754
No 439
>KOG3741|consensus
Probab=98.76 E-value=5.4e-08 Score=67.28 Aligned_cols=101 Identities=19% Similarity=0.118 Sum_probs=74.0
Q ss_pred HHHHHHHHhhCCCCCccceeeeeee---CCCeEEEEEeccCC-CCHHHHHHhccchhHHhh---hhcCCCCChHHHHHHH
Q psy4991 18 ALREYNIHKALDHPRVVKLYDVFEI---DANSFCTVLEYCDG-HDLDFYLKQHKTIAEREA---RCLSQPYLSTSARSIV 90 (122)
Q Consensus 18 ~~~e~~~l~~~~h~~i~~~~~~~~~---~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 90 (122)
-..-++.++++.|+|++.+..+|.+ ....+++|++|.++ ++|.++--...+...... .......++..+|.++
T Consensus 320 ~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~ 399 (655)
T KOG3741|consen 320 DTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYI 399 (655)
T ss_pred chHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHH
Confidence 3345778999999999999999851 23478899999874 666655433322221111 1112346788999999
Q ss_pred HHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 91 MQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 91 ~~i~~~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
.|++.|+.++|+.| +.-+-|.+.+|+++
T Consensus 400 ~QLtaaL~sIHssG--LAck~L~~~kIlv~ 427 (655)
T KOG3741|consen 400 SQLTAALYSIHSSG--LACKTLDLKKILVT 427 (655)
T ss_pred HHHHHHHHHHHhcC--ceeecccHhHeEee
Confidence 99999999999999 88899999999886
No 440
>KOG1023|consensus
Probab=98.66 E-value=8.7e-08 Score=66.13 Aligned_cols=84 Identities=21% Similarity=0.194 Sum_probs=67.9
Q ss_pred HhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCC
Q psy4991 25 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIK 104 (122)
Q Consensus 25 l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ 104 (122)
|+.+.|.|+..++|.+. ++...+.+.+||..|+|.+.+... . ..+.+.-...+++.++.|+.|+|...
T Consensus 1 l~~l~h~n~~~f~g~~~-~~~~~~~i~~~c~rGsl~D~i~~~-~----------~~~d~~F~~s~~rdi~~Gl~ylh~s~ 68 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASV-DGPEMIVIWEYCSRGSLLDILSNE-D----------IKLDYFFILSFIRDISKGLAYLHNSP 68 (484)
T ss_pred CcccchhhhhhheeeEe-cCCceEEEEeeecCccHHhHHhcc-c----------cCccHHHHHHHHHHHHHHHHHHhcCc
Confidence 35678999999999998 668888999999999999999862 1 12222233688999999999999975
Q ss_pred CCeeeeCCCCCCccccc
Q psy4991 105 PPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 105 ~~i~h~dlk~~nill~~ 121 (122)
-..|+.++.+|.+++.
T Consensus 69 -i~~hg~l~s~nClvd~ 84 (484)
T KOG1023|consen 69 -IGYHGALKSSNCLVDS 84 (484)
T ss_pred -ceeeeeeccccceeee
Confidence 1389999999999874
No 441
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.56 E-value=5.1e-07 Score=56.29 Aligned_cols=62 Identities=24% Similarity=0.243 Sum_probs=40.0
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCC--CCccceeeeeeeCC--CeEEEEEeccCCCCHHHH
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDH--PRVVKLYDVFEIDA--NSFCTVLEYCDGHDLDFY 62 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~--~~~~lv~e~~~~~~L~~~ 62 (122)
+++|.............+.+|..+++.+.+ .++..++....... +..++++||++|.++...
T Consensus 25 ~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~ 90 (223)
T cd05154 25 LVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDR 90 (223)
T ss_pred eEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCC
Confidence 356666544222245678899999999865 34566766665221 256799999998766543
No 442
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.55 E-value=5e-07 Score=55.54 Aligned_cols=86 Identities=21% Similarity=0.234 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHhhCCCC--CccceeeeeeeCCCeEEEEEeccC--CCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHH
Q psy4991 15 PRHALREYNIHKALDHP--RVVKLYDVFEIDANSFCTVLEYCD--GHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIV 90 (122)
Q Consensus 15 ~~~~~~e~~~l~~~~h~--~i~~~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (122)
.....+|.+.|..+... +++.++.+. . ..++|||++ |..+..+.... .... ....+.
T Consensus 52 ~~~~~~E~~~L~~l~~~Gv~vP~p~~~~---~--~~ivME~I~~~G~~~~~l~~~~--~~~~------------~~~~~~ 112 (188)
T PF01163_consen 52 REWAKKEFRNLKRLYEAGVPVPKPYDYN---R--NVIVMEYIGEDGVPLPRLKDVD--LSPE------------EPKELL 112 (188)
T ss_dssp HHHHHHHHHHHHHCCCTT-SS--EEEEE---T--TEEEEE--EETTEEGGCHHHCG--GGGS------------THHHHH
T ss_pred HHHHHHHHHHHHHHHHCCccCCcEEEEe---C--CEEEEEecCCCccchhhHHhcc--ccch------------hHHHHH
Confidence 35567899999999655 556665432 1 248999998 55554433321 1011 115667
Q ss_pred HHHHHHHHH-HHcCCCCeeeeCCCCCCccccc
Q psy4991 91 MQVVSALKY-LNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 91 ~~i~~~l~~-lh~~~~~i~h~dlk~~nill~~ 121 (122)
.++...+.. +|..| ++|+|+.+.||++++
T Consensus 113 ~~il~~~~~~~~~~g--ivHGDLs~~NIlv~~ 142 (188)
T PF01163_consen 113 EEILEEIIKMLHKAG--IVHGDLSEYNILVDD 142 (188)
T ss_dssp HHHHHHHHHHHHCTT--EEESS-STTSEEEET
T ss_pred HHHHHHHHHHHHhcC--ceecCCChhhEEeec
Confidence 777775555 57888 999999999999875
No 443
>KOG0590|consensus
Probab=98.45 E-value=2.2e-08 Score=71.13 Aligned_cols=95 Identities=29% Similarity=0.355 Sum_probs=72.8
Q ss_pred chHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHH-HhccchhHHhhhhcCCCCChHHHHHHHH
Q psy4991 14 FPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL-KQHKTIAEREARCLSQPYLSTSARSIVM 91 (122)
Q Consensus 14 ~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (122)
...+...|..+-..+. |.|++++++... .....++.+++..++++...+ .... ....+...-.++.
T Consensus 63 ~~~~i~~e~~~~~~~s~h~n~~~~~~~~~-~~~~~~~~~~~s~g~~~f~~i~~~~~-----------~~~~~~~~~~~~~ 130 (601)
T KOG0590|consen 63 SSEHIDTETDIQKKLSKHSNTVHMIEPSS-SPRSYLLSLSYSDGGSLFSKISHPDS-----------TGTSSSSASRYLP 130 (601)
T ss_pred hhhhcCccccccccccccccccccCCccC-CCcccccccCcccccccccccccCCc-----------cCCCCcchhhhhh
Confidence 3344455666666665 999999999998 777888999999999988776 3322 0122223378999
Q ss_pred HHHHHHHHHH-cCCCCeeeeCCCCCCcccccC
Q psy4991 92 QVVSALKYLN-EIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 92 ~i~~~l~~lh-~~~~~i~h~dlk~~nill~~~ 122 (122)
|+..++.|+| ..+ +.|+|+||+|.+++.+
T Consensus 131 ql~s~l~~~H~~~~--~~h~~ikP~n~~l~~s 160 (601)
T KOG0590|consen 131 QLNSGLSYLHPENG--VTHRDIKPSNSLLDES 160 (601)
T ss_pred hhccCccccCcccc--cccCCCCCccchhccC
Confidence 9999999999 777 9999999999998753
No 444
>KOG0601|consensus
Probab=98.30 E-value=2.9e-07 Score=63.94 Aligned_cols=91 Identities=19% Similarity=0.243 Sum_probs=68.9
Q ss_pred HHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHH
Q psy4991 16 RHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVV 94 (122)
Q Consensus 16 ~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 94 (122)
...+.|+.+...+ .|.+++..+..|. .....++-.|||+++++.....-.. -+.+...+....|++
T Consensus 310 i~sl~ev~l~~~l~~~~~~~g~~~~W~-~~r~~~ip~e~~~~~s~~l~~~~~~------------~~d~~~~~~~~~q~~ 376 (524)
T KOG0601|consen 310 IFSLGEVILEAILGSHLPSVGKNSSWS-QLRQGYIPLEFCEGGSSSLRSVTSQ------------MLDEDPRLRLTAQIL 376 (524)
T ss_pred hcchhhhhHhhHhhcccccCCCCCCcc-ccccccCchhhhcCcchhhhhHHHH------------hcCcchhhhhHHHHH
Confidence 3345677777777 5888888877776 4556668889999888866552211 222334488999999
Q ss_pred HHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 95 SALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 95 ~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.++.++|+.. ++|+|++|+||++..
T Consensus 377 ~~l~~i~s~~--~~~~d~~psni~i~~ 401 (524)
T KOG0601|consen 377 TALNVIHSKL--FVHLDVKPSNILISN 401 (524)
T ss_pred hccccccchh--hhcccccccceeecc
Confidence 9999999998 999999999999865
No 445
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=98.28 E-value=2.6e-06 Score=51.32 Aligned_cols=46 Identities=22% Similarity=0.305 Sum_probs=36.6
Q ss_pred CCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 57 HDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 57 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
|+|.+++...+ ..+.+..++.++.|++.|+.|||+.+ ||+||+++.
T Consensus 1 GsL~~~l~~~~-----------~~l~~~~~~~i~~qi~~~L~~lH~~~--------kp~Nil~~~ 46 (176)
T smart00750 1 VSLADILEVRG-----------RPLNEEEIWAVCLQCLRALRELHRQA--------KSGNILLTW 46 (176)
T ss_pred CcHHHHHHHhC-----------CCCCHHHHHHHHHHHHHHHHHHHhcC--------CcccEeEcC
Confidence 67777776532 24566667999999999999999985 999999875
No 446
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.19 E-value=1.3e-05 Score=50.44 Aligned_cols=54 Identities=26% Similarity=0.386 Sum_probs=41.1
Q ss_pred eEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 46 SFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 46 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
..++++||++|..|.+...-. -.....+.+++.-+|..| +.|+|..|+|++++.
T Consensus 117 ~~~ll~EYIeG~~l~d~~~i~--------------------e~~~~ki~~~ikqlH~~G--~~HGD~hpgNFlv~~ 170 (229)
T PF06176_consen 117 SYVLLMEYIEGVELNDIEDID--------------------EDLAEKIVEAIKQLHKHG--FYHGDPHPGNFLVSN 170 (229)
T ss_pred EEEEEEEEecCeecccchhcC--------------------HHHHHHHHHHHHHHHHcC--CccCCCCcCcEEEEC
Confidence 456899999987776543211 123456777899999999 999999999999874
No 447
>PRK09902 hypothetical protein; Provisional
Probab=98.03 E-value=6.2e-05 Score=47.13 Aligned_cols=95 Identities=18% Similarity=0.122 Sum_probs=64.2
Q ss_pred chHHHHHHHHHHhhCCCCC--ccceeeeeee-C--CCeEEEEEeccCC-CCHHHHHHhccchhHHhhhhcCCCCChHHHH
Q psy4991 14 FPRHALREYNIHKALDHPR--VVKLYDVFEI-D--ANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARCLSQPYLSTSAR 87 (122)
Q Consensus 14 ~~~~~~~e~~~l~~~~h~~--i~~~~~~~~~-~--~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 87 (122)
-...+.+|...+..+...+ ++.+...-.. . ...-.||+|-+++ .+|.+.+... .. .+..+....
T Consensus 62 g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~-~~---------~~~~~~~k~ 131 (216)
T PRK09902 62 GRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQH-AV---------SPYSDEVRQ 131 (216)
T ss_pred CchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcC-Cc---------CCcchHHHH
Confidence 3577899999999985433 4444311110 1 1235688897754 6777776542 11 112223336
Q ss_pred HHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 88 SIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 88 ~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
.+..+++..+.-||+.| +.|+|+.+.||+++
T Consensus 132 ~il~~va~~ia~LH~~G--v~Hgdly~khIll~ 162 (216)
T PRK09902 132 AMLKAVALAFKKMHSVN--RQHGCCYVRHIYVK 162 (216)
T ss_pred HHHHHHHHHHHHHHHCC--CcCCCCCHhheeec
Confidence 88999999999999999 99999999999986
No 448
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=97.98 E-value=1.9e-05 Score=51.57 Aligned_cols=68 Identities=18% Similarity=0.207 Sum_probs=41.7
Q ss_pred EEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 47 FCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 47 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
.+++|+-+. ++|..++..-...... ...+.......+..|++..++++|..| ++|+|++|+|++++.+
T Consensus 114 ~~~l~P~~~-~dL~~~~~~l~~~~~~-----~~~l~~~arl~lT~Q~I~lvA~Lh~~G--lVHgdi~~~nfll~~~ 181 (288)
T PF14531_consen 114 RFLLMPRAQ-GDLQDLVEALFSRAQT-----HSPLAFAARLSLTVQMIRLVANLHSYG--LVHGDIKPENFLLDQD 181 (288)
T ss_dssp EEEEEE--S-EEHHHHHHHHHHHTTT-----SHHHHHHHHHHHHHHHHHHHHHHHHTT--EEEST-SGGGEEE-TT
T ss_pred hhhccchhh-hcHHHHHHHHhhcccc-----cchhHHHHHHHHHHHHHHHHHHHhhcc--eEecccceeeEEEcCC
Confidence 356777775 8888776531110000 000111122456689999999999999 9999999999999864
No 449
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.97 E-value=0.00026 Score=44.06 Aligned_cols=88 Identities=22% Similarity=0.297 Sum_probs=57.9
Q ss_pred chHHHHHHHHHHhhCC------CCCccceeeeeeeCCCeEEEEEeccC------CCCHHHHHHhccchhHHhhhhcCCCC
Q psy4991 14 FPRHALREYNIHKALD------HPRVVKLYDVFEIDANSFCTVLEYCD------GHDLDFYLKQHKTIAEREARCLSQPY 81 (122)
Q Consensus 14 ~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~~~~lv~e~~~------~~~L~~~l~~~~~~~~~~~~~~~~~~ 81 (122)
......+|+.....+. +.+|..++|..+++.+ ..+++|... ..+|.+++.... +..
T Consensus 54 ~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G-~Glv~e~I~d~dG~~s~TL~~~l~~~~-~~~---------- 121 (199)
T PF10707_consen 54 RYRQNRRELRYYKQLSLRRGVDWSHIPRFYGFVETNLG-LGLVVELIRDADGNISPTLEDYLKEGG-LTE---------- 121 (199)
T ss_pred hhHHHHHHHHHHHHHhhccCCcccccccEeEEEecCCc-eEEEEEEEECCCCCcCccHHHHHHcCC-ccH----------
Confidence 3566677777666555 7899999999985544 457888653 256777775422 111
Q ss_pred ChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 82 LSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 82 ~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.....+-.-..++-+.+ |+.+|++|.||++..
T Consensus 122 ------~~~~~L~~f~~~l~~~~--Iv~~dl~~~NIv~~~ 153 (199)
T PF10707_consen 122 ------ELRQALDEFKRYLLDHH--IVIRDLNPHNIVVQR 153 (199)
T ss_pred ------HHHHHHHHHHHHHHHcC--CeecCCCcccEEEEe
Confidence 12222333455666777 999999999999864
No 450
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.68 E-value=0.00095 Score=42.52 Aligned_cols=46 Identities=15% Similarity=-0.010 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHH
Q psy4991 16 RHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFY 62 (122)
Q Consensus 16 ~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 62 (122)
....+|++++..+ ++..+..+++... ..+..+++||+++|.++...
T Consensus 36 ~~~~~E~~~l~~l~~~~~vP~v~~~~~-~~~~~~lv~e~i~G~~l~~~ 82 (244)
T cd05150 36 YELEREAERLRWLAGKLPVPEVIDYGS-DDGRAWLLTSAVPGVPAAAL 82 (244)
T ss_pred cchHHHHHHHHHHHhcCCCCeEEEEEe-cCCccEEEEEeeCCccHhHh
Confidence 4567889888887 3455667777665 44556789999998777644
No 451
>KOG0601|consensus
Probab=97.63 E-value=5e-05 Score=53.19 Aligned_cols=92 Identities=22% Similarity=0.284 Sum_probs=69.3
Q ss_pred hHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHH
Q psy4991 15 PRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQV 93 (122)
Q Consensus 15 ~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 93 (122)
..+-.+|.....++ .|++.+..+..+. +.+..++-+|.+. .++..+...... -+++..++....+.
T Consensus 161 ~~~k~~~~~s~~~i~~~~~~v~~~~~~e-~~~~lfiqtE~~~-~sl~~~~~~~~~-----------~~p~~~l~~~~~~~ 227 (524)
T KOG0601|consen 161 SKRKLREFLSHHKIDSHENPVRDSPAWE-GSGILFIQTELCG-ESLQSYCHTPCN-----------FLPDNLLWNSLRDW 227 (524)
T ss_pred cccccchhhcccccCccccccccCcccc-cCCcceeeecccc-chhHHhhhcccc-----------cCCchhhhhHHhhh
Confidence 34445677777777 6999999888887 7788888899986 677666543222 23444457777777
Q ss_pred HH----HHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 94 VS----ALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 94 ~~----~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+ |+.++|..+ ++|.|+||+||+...
T Consensus 228 ~~~~~~al~~~hs~~--~~~~~~kp~~i~~~~ 257 (524)
T KOG0601|consen 228 LSRDVTALSHLHSNN--IVHDDLKPANIFTTS 257 (524)
T ss_pred hhcccccccccCCCc--ccccccchhheeccc
Confidence 77 999999999 999999999999864
No 452
>PLN02876 acyl-CoA dehydrogenase
Probab=97.61 E-value=0.002 Score=48.10 Aligned_cols=44 Identities=32% Similarity=0.498 Sum_probs=31.9
Q ss_pred chHHHHHHHHHHhhCC-CCCc--cceeeeeeeCC---CeEEEEEeccCCCC
Q psy4991 14 FPRHALREYNIHKALD-HPRV--VKLYDVFEIDA---NSFCTVLEYCDGHD 58 (122)
Q Consensus 14 ~~~~~~~e~~~l~~~~-h~~i--~~~~~~~~~~~---~~~~lv~e~~~~~~ 58 (122)
....+.+|.++++.+. |.++ +.+++.+. +. +..++||||++|..
T Consensus 81 ~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~-d~~v~G~~flVME~v~G~~ 130 (822)
T PLN02876 81 SAHAVEREYQVLRALGEHTDVPVPKVYCLCT-DASVIGTAFYIMEYLEGRI 130 (822)
T ss_pred cHHHHHHHHHHHHHHhhcCCCCCCcEEEEec-CCCcCCCceEEEEecCCcc
Confidence 3457889999999984 6654 77777765 32 45679999998654
No 453
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=97.45 E-value=0.00037 Score=45.30 Aligned_cols=85 Identities=20% Similarity=0.172 Sum_probs=54.7
Q ss_pred chHHHHHHHHHHhhCCCC--CccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHH
Q psy4991 14 FPRHALREYNIHKALDHP--RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVM 91 (122)
Q Consensus 14 ~~~~~~~e~~~l~~~~h~--~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (122)
.+....+|.+.|+++... .++..++ .+...++||+..|-.|...-- ..... -.++.
T Consensus 152 sRl~A~rEf~~L~~L~~~G~~VP~P~~-----~nRHaVvMe~ieG~eL~~~r~-----~~en~------------~~il~ 209 (304)
T COG0478 152 SRLAAEREFEALQRLYPEGVKVPKPIA-----WNRHAVVMEYIEGVELYRLRL-----DVENP------------DEILD 209 (304)
T ss_pred HHHHHHHHHHHHHHhhhcCCCCCCccc-----cccceeeeehcccceeecccC-----cccCH------------HHHHH
Confidence 345667899999998544 5555544 234568999999765543221 01111 34445
Q ss_pred HHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 92 QVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 92 ~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
.++.-+.-.-..| ++|+|+++=||+++++
T Consensus 210 ~il~~~~~~~~~G--iVHGDlSefNIlV~~d 238 (304)
T COG0478 210 KILEEVRKAYRRG--IVHGDLSEFNILVTED 238 (304)
T ss_pred HHHHHHHHHHHcC--ccccCCchheEEEecC
Confidence 5555555555677 9999999999999863
No 454
>KOG1033|consensus
Probab=97.36 E-value=6.7e-05 Score=52.11 Aligned_cols=62 Identities=24% Similarity=0.416 Sum_probs=48.9
Q ss_pred eEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 46 SFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 46 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+++.|++|.-.+|.+.+..... ...-.....+.++.|++.++.| ++ .+|+|+||.||+...
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~---------~e~~s~s~~~~~~~q~~~~~~y---k~--~ihrdlkp~nif~~~ 391 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRT---------GEERSLSLMLDIFKQIAPAVEY---KG--LIHRDLKPSNIFFSD 391 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCc---------ccccchhHHHHHHHhhccchhh---cc--chhhhcccccccccc
Confidence 47889999999999998875332 2233344558899999999999 77 999999999998753
No 455
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.18 E-value=0.0024 Score=39.38 Aligned_cols=88 Identities=16% Similarity=0.040 Sum_probs=60.6
Q ss_pred HHHHHHhhCCC-CCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHH
Q psy4991 20 REYNIHKALDH-PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALK 98 (122)
Q Consensus 20 ~e~~~l~~~~h-~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 98 (122)
.|.-+++.+++ +++++++|+|- . .++.|+...+++... ...+. .-...+|..+..++.+++..+.
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG----~-~~v~E~~~~~~~~~~---~~~l~------~~~~~~w~~R~~iA~~lL~~l~ 73 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCG----R-FYVVEYVGAGSLYGI---YRPLS------QFLQSPWEQRAKIALQLLELLE 73 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECC----C-EEEEEeecCcccccc---ccccc------cccccCHHHHHHHHHHHHHHHH
Confidence 46777888854 69999999994 1 368899986655422 00000 0012356667899999999999
Q ss_pred HHHcCC-CCeeeeCCCCCCccccc
Q psy4991 99 YLNEIK-PPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 99 ~lh~~~-~~i~h~dlk~~nill~~ 121 (122)
+++... .++.-.|++++|+-+++
T Consensus 74 ~l~~~~~~~~~lcDv~~~nfgv~~ 97 (188)
T PF12260_consen 74 ELDHGPLGFFYLCDVSPDNFGVND 97 (188)
T ss_pred HHhcCCCCcEEEeecchHHeEEeC
Confidence 998731 12777999999998875
No 456
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=97.06 E-value=0.018 Score=36.54 Aligned_cols=43 Identities=16% Similarity=0.257 Sum_probs=30.6
Q ss_pred hHHHHHHHHHHhhCCCC--CccceeeeeeeCCCeEEEEEeccCCCC
Q psy4991 15 PRHALREYNIHKALDHP--RVVKLYDVFEIDANSFCTVLEYCDGHD 58 (122)
Q Consensus 15 ~~~~~~e~~~l~~~~h~--~i~~~~~~~~~~~~~~~lv~e~~~~~~ 58 (122)
.....+|.+.++.+..- .+..+++... ..+...++||++.|.+
T Consensus 36 ~~~i~~E~~~l~~l~~~glpvP~~~~~~~-~~~~~glv~e~i~G~~ 80 (226)
T TIGR02172 36 KETIKREFDASRKVFSLGIPTPHPFDLVE-DGGRLGLIYELIVGKR 80 (226)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCceEEEEe-cCCeeeeeeeecCCcc
Confidence 45678899999888533 3466666665 5556778999999753
No 457
>KOG1235|consensus
Probab=97.03 E-value=0.0053 Score=43.71 Aligned_cols=68 Identities=22% Similarity=0.285 Sum_probs=40.4
Q ss_pred ccceeeeeeeCCCeEEEEEeccCCCCHHHH--HHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHH-HHcCCCCeee
Q psy4991 33 VVKLYDVFEIDANSFCTVLEYCDGHDLDFY--LKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKY-LNEIKPPVIH 109 (122)
Q Consensus 33 i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~-lh~~~~~i~h 109 (122)
|+++++.+. ..-.++||||.|..+.+. +++.+-.+ ..++..++++-.. +-..| ++|
T Consensus 266 VP~Vy~~~s---t~RVLtME~~~G~~i~Dl~~i~~~gi~~----------------~~i~~~l~~~~~~qIf~~G--ffH 324 (538)
T KOG1235|consen 266 VPKVYWDLS---TKRVLTMEYVDGIKINDLDAIDKRGISP----------------HDILNKLVEAYLEQIFKTG--FFH 324 (538)
T ss_pred CCeehhhcC---cceEEEEEecCCccCCCHHHHHHcCCCH----------------HHHHHHHHHHHHHHHHhcC--Ccc
Confidence 666666664 234589999999777544 33322211 1233333333222 23456 999
Q ss_pred eCCCCCCccccc
Q psy4991 110 YDLKPGKPLFLF 121 (122)
Q Consensus 110 ~dlk~~nill~~ 121 (122)
+|--|.||++.+
T Consensus 325 aDPHPGNilv~~ 336 (538)
T KOG1235|consen 325 ADPHPGNILVRP 336 (538)
T ss_pred CCCCCCcEEEec
Confidence 999999999974
No 458
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=96.63 E-value=0.011 Score=42.06 Aligned_cols=57 Identities=23% Similarity=0.226 Sum_probs=34.0
Q ss_pred EEEEEeccCCCCHHHHH--HhccchhHHhhhhcCCCCChHHHHHHHHHHHHH-HHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 47 FCTVLEYCDGHDLDFYL--KQHKTIAEREARCLSQPYLSTSARSIVMQVVSA-LKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 47 ~~lv~e~~~~~~L~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
-.++|||+.|-.+.+.. +..+... ..++..++.+ +..+-..| ++|.|.-|.||++..
T Consensus 241 ~VLtmE~i~Gi~i~d~~~l~~~g~d~----------------k~ia~~~~~~f~~q~~~dg--ffHaDpHpGNi~v~~ 300 (517)
T COG0661 241 RVLTMEWIDGIKISDIAALKSAGIDR----------------KELAELLVRAFLRQLLRDG--FFHADPHPGNILVRS 300 (517)
T ss_pred cEEEEEeeCCEecccHHHHHhcCCCH----------------HHHHHHHHHHHHHHHHhcC--ccccCCCccceEEec
Confidence 34899999998887763 3322211 1222222221 12222356 999999999999875
No 459
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=96.38 E-value=0.011 Score=38.12 Aligned_cols=83 Identities=19% Similarity=0.170 Sum_probs=51.4
Q ss_pred HHHHHHhhCC--CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHH
Q psy4991 20 REYNIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSAL 97 (122)
Q Consensus 20 ~e~~~l~~~~--h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 97 (122)
+|...|.++. +-.++..+.+.. ..++|||++.... . ...+. .-++.+.....+..+++..+
T Consensus 117 kEf~NL~R~~eAGVrvP~Pi~~~~-----nVLvMEfIg~~g~----p-AP~Lk-------Dv~~e~~e~~~~~~~~v~~~ 179 (268)
T COG1718 117 KEFRNLKRAYEAGVRVPEPIAFRN-----NVLVMEFIGDDGL----P-APRLK-------DVPLELEEAEGLYEDVVEYM 179 (268)
T ss_pred HHHHHHHHHHHcCCCCCCceeecC-----CeEEEEeccCCCC----C-CCCcc-------cCCcCchhHHHHHHHHHHHH
Confidence 5666777763 445555555443 2489999964210 0 00010 01112223467788888888
Q ss_pred HHHHc-CCCCeeeeCCCCCCccccc
Q psy4991 98 KYLNE-IKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 98 ~~lh~-~~~~i~h~dlk~~nill~~ 121 (122)
.-|-. .+ ++|+||+.=|||+.+
T Consensus 180 ~~l~~~a~--LVHgDLSEyNiL~~~ 202 (268)
T COG1718 180 RRLYKEAG--LVHGDLSEYNILVHD 202 (268)
T ss_pred HHHHHhcC--cccccchhhheEEEC
Confidence 88877 77 999999999999863
No 460
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=96.16 E-value=0.071 Score=33.87 Aligned_cols=46 Identities=13% Similarity=-0.005 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHhhCCCC---CccceeeeeeeC--CCeEEEEEeccCCCCHH
Q psy4991 15 PRHALREYNIHKALDHP---RVVKLYDVFEID--ANSFCTVLEYCDGHDLD 60 (122)
Q Consensus 15 ~~~~~~e~~~l~~~~h~---~i~~~~~~~~~~--~~~~~lv~e~~~~~~L~ 60 (122)
.....+|.++++.+... .+..+++..... ....+++|++++|.++.
T Consensus 32 ~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G~~l~ 82 (235)
T cd05155 32 AGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEGETAT 82 (235)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecCCCCC
Confidence 45788899999887421 344444433311 12347899999876653
No 461
>KOG0606|consensus
Probab=95.81 E-value=0.0043 Score=47.14 Aligned_cols=76 Identities=29% Similarity=0.401 Sum_probs=56.9
Q ss_pred CCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeee
Q psy4991 31 PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHY 110 (122)
Q Consensus 31 ~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~ 110 (122)
|-++...-.+. .....+++++++.+++|...+...+......+ ..+...+.....+||... +.|+
T Consensus 864 P~v~~~~~s~~-~rsP~~L~~~~~~~~~~~Skl~~~~~~saepa------------Rs~i~~~vqs~e~L~s~~--r~h~ 928 (1205)
T KOG0606|consen 864 PAVVRSFPSFP-CRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPA------------RSPILERVQSLESLHSSL--RKHR 928 (1205)
T ss_pred CceecccCCCC-CCCCcchhhHHhccCCchhhhhcCCCcccccc------------cchhHHHHhhhhccccch--hhcc
Confidence 44443333333 45567899999999999999887665554444 667788889999999987 8999
Q ss_pred CCCCCCccccc
Q psy4991 111 DLKPGKPLFLF 121 (122)
Q Consensus 111 dlk~~nill~~ 121 (122)
|++|.|++..+
T Consensus 929 ~~~p~~~l~~~ 939 (1205)
T KOG0606|consen 929 DLKPDSLLIAY 939 (1205)
T ss_pred cccccchhhcc
Confidence 99999998653
No 462
>KOG0606|consensus
Probab=95.70 E-value=0.0072 Score=45.99 Aligned_cols=25 Identities=40% Similarity=0.671 Sum_probs=23.4
Q ss_pred HHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991 94 VSALKYLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 94 ~~~l~~lh~~~~~i~h~dlk~~nill~ 120 (122)
+.+++|+|+-+ |+|||+||+|.+++
T Consensus 153 vla~Eylh~yg--ivhrdlkpdnllIT 177 (1205)
T KOG0606|consen 153 VLAVEYLHSYG--IVHRDLKPDNLLIT 177 (1205)
T ss_pred hHHhHhhccCC--eecCCCCCCcceee
Confidence 77899999999 99999999999986
No 463
>KOG2270|consensus
Probab=93.84 E-value=0.17 Score=35.17 Aligned_cols=84 Identities=19% Similarity=0.216 Sum_probs=51.5
Q ss_pred HHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCH-HHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHH
Q psy4991 20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALK 98 (122)
Q Consensus 20 ~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 98 (122)
.|.+.|.++...+|...--... ....|||+|+..... ...|+ ..++....+..+-.+++.-|.
T Consensus 215 KE~RNLkRl~~aGIP~PePIlL---k~hVLVM~FlGrdgw~aPkLK-------------d~~ls~~ka~~~Y~~~v~~MR 278 (520)
T KOG2270|consen 215 KEMRNLKRLNNAGIPCPEPILL---KNHVLVMEFLGRDGWAAPKLK-------------DASLSTSKARELYQQCVRIMR 278 (520)
T ss_pred HHHHHHHHHHhcCCCCCCceee---ecceEeeeeccCCCCcCcccc-------------cccCChHHHHHHHHHHHHHHH
Confidence 5777788887666544433332 334589999963111 11111 122333445677777788888
Q ss_pred HHHcCCCCeeeeCCCCCCcccc
Q psy4991 99 YLNEIKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 99 ~lh~~~~~i~h~dlk~~nill~ 120 (122)
-|.+. +.++|.||.-=|+|+.
T Consensus 279 ~lY~~-c~LVHADLSEfN~Lyh 299 (520)
T KOG2270|consen 279 RLYQK-CRLVHADLSEFNLLYH 299 (520)
T ss_pred HHHHH-hceeccchhhhhheEE
Confidence 88664 4499999998898874
No 464
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=93.17 E-value=1.4 Score=29.83 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=28.9
Q ss_pred chHHHHHHHHHHhhCCC--CCccceeeeeeeCC-CeEEEEEeccCC
Q psy4991 14 FPRHALREYNIHKALDH--PRVVKLYDVFEIDA-NSFCTVLEYCDG 56 (122)
Q Consensus 14 ~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~-~~~~lv~e~~~~ 56 (122)
...+..+|.++++.+.- .-+...++.|.... +..+.+|+|+.|
T Consensus 64 ~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veG 109 (321)
T COG3173 64 SAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEG 109 (321)
T ss_pred hhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecc
Confidence 44566778888887743 34556677776333 467789999986
No 465
>KOG0576|consensus
Probab=92.89 E-value=0.045 Score=40.09 Aligned_cols=80 Identities=11% Similarity=0.169 Sum_probs=48.2
Q ss_pred HHHHHHHHhhCCCCC-ccceeeeeeeCCCeEEEEEeccCCC-CHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHH
Q psy4991 18 ALREYNIHKALDHPR-VVKLYDVFEIDANSFCTVLEYCDGH-DLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVS 95 (122)
Q Consensus 18 ~~~e~~~l~~~~h~~-i~~~~~~~~~~~~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 95 (122)
..-++++|.+++||| .+..++.++ .....++.++++.++ +-...... .+ ..+...+.....+.-+.
T Consensus 280 ~rl~~eLLdK~n~P~~~v~~~~d~~-~E~~~~i~~~i~s~~rs~~~~~~~----se-------~~~~~~~~~~~~r~et~ 347 (829)
T KOG0576|consen 280 RRLAIELLDKVNNPNPVVRYLEDYD-GEDYLWIPMRICSTGRSSALEMTV----SE-------IALEQYQFAYPLRKETR 347 (829)
T ss_pred hHHHHHHHHHccCCCCcccccccCC-cccccchhhhhhcCCccccccCCh----hh-------Hhhhhhhhhhhhhhhcc
Confidence 345788999999999 666666666 556778899998765 11111100 00 01111222445556667
Q ss_pred HHHHHHcCCCCeeeeC
Q psy4991 96 ALKYLNEIKPPVIHYD 111 (122)
Q Consensus 96 ~l~~lh~~~~~i~h~d 111 (122)
++.++|+.. -+|+|
T Consensus 348 ~l~~l~~~~--~~~~d 361 (829)
T KOG0576|consen 348 PLAELHSSY--KVHRD 361 (829)
T ss_pred ccccccccc--ccCcc
Confidence 788888864 47777
No 466
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.87 E-value=1.7 Score=28.33 Aligned_cols=45 Identities=24% Similarity=0.117 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHhhC---CCCCccceeeeeeeCCCeEEEEEeccCCCCHH
Q psy4991 15 PRHALREYNIHKAL---DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLD 60 (122)
Q Consensus 15 ~~~~~~e~~~l~~~---~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~ 60 (122)
...|..|+.-|..+ +--++.+++.+-. +....++|+||++.+.+.
T Consensus 52 ~~~f~AEa~gL~~la~s~ti~VP~vi~~G~-~~~~sylVle~L~~~~~d 99 (286)
T COG3001 52 LSMFTAEADGLELLARSNTITVPKVIAVGA-SRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred HHHHHHHHHHHHHHHhcCCccccceEEecC-CCCeeEEEEeeccCCCCC
Confidence 45666777766666 3356667766666 677889999999865554
No 467
>PHA03111 Ser/Thr kinase; Provisional
Probab=92.21 E-value=0.27 Score=33.62 Aligned_cols=36 Identities=25% Similarity=0.334 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHcC--CCCeeeeCCCCCCccccc
Q psy4991 86 ARSIVMQVVSALKYLNEI--KPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 86 ~~~~~~~i~~~l~~lh~~--~~~i~h~dlk~~nill~~ 121 (122)
+..++.|++.-.-.+-.. .-.++|.||||.|||+-+
T Consensus 281 ikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFd 318 (444)
T PHA03111 281 IKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFD 318 (444)
T ss_pred HHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEec
Confidence 455666665544333221 124899999999999854
No 468
>PRK10593 hypothetical protein; Provisional
Probab=91.65 E-value=2.3 Score=28.26 Aligned_cols=45 Identities=22% Similarity=0.204 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHhhCC-C--CCccceeeeeee--CCCeEEEEEeccCCCCH
Q psy4991 15 PRHALREYNIHKALD-H--PRVVKLYDVFEI--DANSFCTVLEYCDGHDL 59 (122)
Q Consensus 15 ~~~~~~e~~~l~~~~-h--~~i~~~~~~~~~--~~~~~~lv~e~~~~~~L 59 (122)
...+..|...++.+. . ..++++++.+.. ..+..+++||++++.++
T Consensus 51 ~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 51 PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV 100 (297)
T ss_pred chHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence 357889999998883 2 468888887642 23557899999997655
No 469
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=91.00 E-value=0.12 Score=35.32 Aligned_cols=16 Identities=38% Similarity=0.567 Sum_probs=14.0
Q ss_pred CeeeeCCCCCCccccc
Q psy4991 106 PVIHYDLKPGKPLFLF 121 (122)
Q Consensus 106 ~i~h~dlk~~nill~~ 121 (122)
.++|.||||.|||+-+
T Consensus 299 nF~H~DLKPdNILiFd 314 (434)
T PF05445_consen 299 NFLHVDLKPDNILIFD 314 (434)
T ss_pred eeeecccCcCcEEEec
Confidence 4899999999999854
No 470
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=89.48 E-value=3.1 Score=25.76 Aligned_cols=48 Identities=19% Similarity=0.126 Sum_probs=30.9
Q ss_pred chHHHHHHHHHHhhCCCC--Cccceeeeee--eCCCeEEEEEeccCCCCHHH
Q psy4991 14 FPRHALREYNIHKALDHP--RVVKLYDVFE--IDANSFCTVLEYCDGHDLDF 61 (122)
Q Consensus 14 ~~~~~~~e~~~l~~~~h~--~i~~~~~~~~--~~~~~~~lv~e~~~~~~L~~ 61 (122)
....+.+|..+++.+... .+..++.... ......++++++++|.++..
T Consensus 33 ~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 84 (239)
T PF01636_consen 33 AAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDD 84 (239)
T ss_dssp HHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccc
Confidence 346677888888887422 3566666432 12345789999999877776
No 471
>KOG2268|consensus
Probab=87.63 E-value=0.94 Score=31.16 Aligned_cols=82 Identities=23% Similarity=0.234 Sum_probs=49.9
Q ss_pred hHHHHHHHHHHhhCC-CC-CccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHH
Q psy4991 15 PRHALREYNIHKALD-HP-RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQ 92 (122)
Q Consensus 15 ~~~~~~e~~~l~~~~-h~-~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (122)
+-+..+|...|+.+. |. .++..++ -+..++|||++.+-+|.+.-.-..+ ..+...
T Consensus 154 Rlaa~kEfafmkaL~e~gfpVPkpiD-----~~RH~Vvmelv~g~Pl~~v~~v~d~------------------~~ly~~ 210 (465)
T KOG2268|consen 154 RLAATKEFAFMKALYERGFPVPKPID-----HNRHCVVMELVDGYPLRQVRHVEDP------------------PTLYDD 210 (465)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCccc-----ccceeeHHHhhcccceeeeeecCCh------------------HHHHHH
Confidence 445567888888874 32 2333332 3457789999998777654321111 122222
Q ss_pred HHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 93 VVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 93 i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+..-+.-|-..| ++|+|..-=||++++
T Consensus 211 lm~~Iv~la~~G--lIHgDFNEFNimv~d 237 (465)
T KOG2268|consen 211 LMGLIVRLANHG--LIHGDFNEFNIMVKD 237 (465)
T ss_pred HHHHHHHHHHcC--ceecccchheeEEec
Confidence 333344556678 999999988999874
No 472
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=87.55 E-value=4.2 Score=25.61 Aligned_cols=38 Identities=37% Similarity=0.579 Sum_probs=23.2
Q ss_pred HHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHH
Q psy4991 18 ALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLD 60 (122)
Q Consensus 18 ~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~ 60 (122)
..+|..++..+. +.-.+.+++... . .+++||++|.++.
T Consensus 42 ~~~E~~~~~~l~~~gl~P~v~~~~~--~---~~l~e~i~G~~l~ 80 (235)
T cd05157 42 RERELRIHKLLSKHGLAPKLYATFQ--N---GLIYEFIPGRTLE 80 (235)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEEeC--C---cEEEEeeCCCcCC
Confidence 346888888874 333344444332 2 3799999986653
No 473
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=85.51 E-value=0.7 Score=30.02 Aligned_cols=26 Identities=15% Similarity=0.119 Sum_probs=20.2
Q ss_pred HHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 96 ALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 96 ~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+.-.|+.....+|+|..|+||+-+.
T Consensus 153 ~L~~fH~~~~~~lHGD~np~NiM~D~ 178 (308)
T PF07387_consen 153 DLMDFHSENQHCLHGDCNPDNIMCDK 178 (308)
T ss_pred HHHHhhccCCCeecCCCChhheeecC
Confidence 45556765556999999999999764
No 474
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=85.10 E-value=1.8 Score=30.86 Aligned_cols=40 Identities=15% Similarity=-0.009 Sum_probs=35.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991 81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122 (122)
Q Consensus 81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~ 122 (122)
..|+..+...+.++.+..-+|..| -.-+|..++|+|++++
T Consensus 114 ~~w~fllrvaRnlA~aFA~lH~~G--h~vGDVn~~~~lVsd~ 153 (637)
T COG4248 114 CAWDFLLRVARNLASAFATLHEHG--HVVGDVNQNSFLVSDD 153 (637)
T ss_pred cccHHHHHHHHHHHHHHHHHHhcC--CcccccCccceeeecC
Confidence 456778899999999999999999 8889999999999764
No 475
>PRK10593 hypothetical protein; Provisional
Probab=85.01 E-value=0.52 Score=31.28 Aligned_cols=17 Identities=12% Similarity=-0.033 Sum_probs=15.1
Q ss_pred CCCeeeeCCCCCCcccc
Q psy4991 104 KPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 104 ~~~i~h~dlk~~nill~ 120 (122)
.+.++|+|+.+.|++++
T Consensus 192 ~psLlHGDlw~gNvl~~ 208 (297)
T PRK10593 192 NCVLVHGNFTLRSMLKD 208 (297)
T ss_pred CCeeEeCCCCcccEEEC
Confidence 46699999999999986
No 476
>KOG1236|consensus
Probab=84.64 E-value=4.3 Score=29.00 Aligned_cols=59 Identities=24% Similarity=0.263 Sum_probs=36.0
Q ss_pred EEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCcccc
Q psy4991 47 FCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFL 120 (122)
Q Consensus 47 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~ 120 (122)
..++-+|..|-++..+++.. ..++.- ...++.--+.++--|-. .+ ++|.|+.|.||++.
T Consensus 320 ~vl~E~~~~Gl~v~~~v~~~-~~pe~l------------~kkva~lg~~AllkMl~vDN--FvHaDlHPGNVlir 379 (565)
T KOG1236|consen 320 LVLVETYERGLSVLRFVKWK-SQPEAL------------VKKVAKLGVNALLKMLIVDN--FVHADLHPGNVLIR 379 (565)
T ss_pred ceeeeeccccccHHhhhhcc-cChHHH------------HHHHHHHHHHHHHHHHHhhc--ceecccCCCcEEEE
Confidence 34566788888888888753 222211 23444444444433322 35 99999999999985
No 477
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=81.39 E-value=0.88 Score=29.90 Aligned_cols=16 Identities=38% Similarity=0.495 Sum_probs=14.3
Q ss_pred CeeeeCCCCCCccccc
Q psy4991 106 PVIHYDLKPGKPLFLF 121 (122)
Q Consensus 106 ~i~h~dlk~~nill~~ 121 (122)
.++|+|+.|.||+++.
T Consensus 186 ~lvHGD~~~~Nilv~~ 201 (276)
T cd05152 186 VLVHGDLHPGHILIDE 201 (276)
T ss_pred eeEeCCCCCCcEEEeC
Confidence 4899999999999975
No 478
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=81.14 E-value=0.82 Score=28.85 Aligned_cols=16 Identities=25% Similarity=0.306 Sum_probs=14.2
Q ss_pred CeeeeCCCCCCccccc
Q psy4991 106 PVIHYDLKPGKPLFLF 121 (122)
Q Consensus 106 ~i~h~dlk~~nill~~ 121 (122)
.++|+|+.+.||+++.
T Consensus 171 ~l~H~Dl~~~Nil~~~ 186 (235)
T cd05157 171 VFCHNDLLSGNIIYNE 186 (235)
T ss_pred EEEcCCCCcCcEEEeC
Confidence 3899999999999874
No 479
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=80.97 E-value=0.89 Score=29.25 Aligned_cols=39 Identities=28% Similarity=0.330 Sum_probs=24.1
Q ss_pred HHHHHHHHHhhCCCCCc-cceeeeeeeCCCeEEEEEeccCCCCHH
Q psy4991 17 HALREYNIHKALDHPRV-VKLYDVFEIDANSFCTVLEYCDGHDLD 60 (122)
Q Consensus 17 ~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~~lv~e~~~~~~L~ 60 (122)
+..+|.++++.+...++ ..++.... -++++||++|.++.
T Consensus 37 ~r~~E~~~l~~l~~~g~~P~~i~~~~-----~~~v~e~i~G~~~~ 76 (256)
T TIGR02721 37 DRQREYQILQALSALGLAPKPILVNE-----HWLLVEWLEGEVIT 76 (256)
T ss_pred cHHHHHHHHHHHHhcCCCCceEEEeC-----CEEEEEeccCcccc
Confidence 35678888888853333 34443332 24799999976553
No 480
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=80.62 E-value=4 Score=26.88 Aligned_cols=40 Identities=23% Similarity=0.304 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhhCCCC-CccceeeeeeeCCCeEEEEEeccCCCCHH
Q psy4991 16 RHALREYNIHKALDHP-RVVKLYDVFEIDANSFCTVLEYCDGHDLD 60 (122)
Q Consensus 16 ~~~~~e~~~l~~~~h~-~i~~~~~~~~~~~~~~~lv~e~~~~~~L~ 60 (122)
.+..+|..++..+... -...+++.+. + .+++||++|.++.
T Consensus 45 ~~r~~E~~~~~~l~~~g~~P~~~~~~~-~----~~v~e~i~G~~l~ 85 (302)
T cd05156 45 IDRERELVVFARLSERNLGPKLYGIFP-N----GRIEEFIPSRTLT 85 (302)
T ss_pred echHHHHHHHHHHHhCCCCCceEEEeC-C----CchhheeCCCcCC
Confidence 4556788888877432 2345555543 2 2588999876654
No 481
>PRK05231 homoserine kinase; Provisional
Probab=78.39 E-value=0.99 Score=30.00 Aligned_cols=16 Identities=44% Similarity=0.339 Sum_probs=14.1
Q ss_pred CeeeeCCCCCCccccc
Q psy4991 106 PVIHYDLKPGKPLFLF 121 (122)
Q Consensus 106 ~i~h~dlk~~nill~~ 121 (122)
.++|+|+.|.||+++.
T Consensus 188 ~liHgD~~~~Nil~~~ 203 (319)
T PRK05231 188 GVIHADLFRDNVLFEG 203 (319)
T ss_pred ccCCCCCCCCcEEEEC
Confidence 3999999999999864
No 482
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=77.58 E-value=3.4 Score=27.41 Aligned_cols=16 Identities=50% Similarity=0.490 Sum_probs=14.3
Q ss_pred CeeeeCCCCCCccccc
Q psy4991 106 PVIHYDLKPGKPLFLF 121 (122)
Q Consensus 106 ~i~h~dlk~~nill~~ 121 (122)
.++|+|+.+.|++++.
T Consensus 188 ~l~HgD~~~~Nvl~~~ 203 (307)
T TIGR00938 188 GVIHADLFPDNVLFDG 203 (307)
T ss_pred ccCCCCCCcCcEEEEC
Confidence 4999999999999864
No 483
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=77.27 E-value=5.2 Score=26.40 Aligned_cols=16 Identities=19% Similarity=-0.016 Sum_probs=14.0
Q ss_pred CeeeeCCCCCCccccc
Q psy4991 106 PVIHYDLKPGKPLFLF 121 (122)
Q Consensus 106 ~i~h~dlk~~nill~~ 121 (122)
.++|+|+.+.|++++.
T Consensus 188 ~liHgD~~~~Nil~~~ 203 (313)
T TIGR02906 188 GFCHQDYAYHNILLKD 203 (313)
T ss_pred ceEcCCCCcccEEEeC
Confidence 4899999999999863
No 484
>KOG1035|consensus
Probab=77.22 E-value=7.5 Score=31.27 Aligned_cols=78 Identities=14% Similarity=0.139 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHhhCCCCCccceeeeeeeCCCe---EEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHH
Q psy4991 15 PRHALREYNIHKALDHPRVVKLYDVFEIDANS---FCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVM 91 (122)
Q Consensus 15 ~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~---~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (122)
.+...-|...+.+..|+|+..++.+-...... ..+..+++..-++...+..-+.. +....+.+..
T Consensus 226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i------------~~~~~r~~~~ 293 (1351)
T KOG1035|consen 226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSI------------PLETLRILHQ 293 (1351)
T ss_pred HHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcccc------------CHHHHHHHHH
Confidence 34445677788888999999998876422211 12334566666666666553333 3344488999
Q ss_pred HHHHHHHHHHcCC
Q psy4991 92 QVVSALKYLNEIK 104 (122)
Q Consensus 92 ~i~~~l~~lh~~~ 104 (122)
+...|+.++|+..
T Consensus 294 ~~~~GL~~~h~~~ 306 (1351)
T KOG1035|consen 294 KLLEGLAYLHSLS 306 (1351)
T ss_pred HHhhhHHHHHHhc
Confidence 9999999999864
No 485
>KOG4720|consensus
Probab=76.64 E-value=8.1 Score=26.35 Aligned_cols=61 Identities=21% Similarity=0.246 Sum_probs=40.3
Q ss_pred HHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHH
Q psy4991 19 LREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSAL 97 (122)
Q Consensus 19 ~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 97 (122)
.+|+.-.+.+ .|.--.++++.|. ++ ||+||++|.+|.----.. -.+..+|+.-|
T Consensus 126 e~Ev~afk~L~a~G~ap~Ly~tF~-NG----Lvyefi~g~tL~p~~mr~--------------------pki~~lIAr~m 180 (391)
T KOG4720|consen 126 ENEVIAFKLLAAYGFAPKLYGTFN-NG----LVYEFIQGKTLEPEHMRE--------------------PKIFRLIARRM 180 (391)
T ss_pred HHHHHHHHHHHHcCcChhhhheec-Cc----eEEeeecCcccChhhccC--------------------hHHHHHHHHHH
Confidence 3556655665 4666678888886 43 799999987774211000 35677788888
Q ss_pred HHHHcCC
Q psy4991 98 KYLNEIK 104 (122)
Q Consensus 98 ~~lh~~~ 104 (122)
.-+|...
T Consensus 181 ak~H~~~ 187 (391)
T KOG4720|consen 181 AKIHSIV 187 (391)
T ss_pred HHhheec
Confidence 8888863
No 486
>PLN02756 S-methyl-5-thioribose kinase
Probab=76.47 E-value=2.1 Score=30.05 Aligned_cols=39 Identities=13% Similarity=0.082 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHhhCC---CCCccceeeeeeeCCCeEEEEEeccCC
Q psy4991 15 PRHALREYNIHKALD---HPRVVKLYDVFEIDANSFCTVLEYCDG 56 (122)
Q Consensus 15 ~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~~lv~e~~~~ 56 (122)
..+...|.+.|+... ...++.++.++. +..+++||++++
T Consensus 78 ~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de---d~~vlvME~L~~ 119 (418)
T PLN02756 78 KERAYFEATALREHGRLCPDHVPEVYHFDR---TMALIGMRYLEP 119 (418)
T ss_pred ccHHHHHHHHHHHhhhcCCCCCCeEEEECC---CCCEEEEeecCC
Confidence 344455677776653 357788888775 334578999975
No 487
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=75.66 E-value=9.7 Score=25.10 Aligned_cols=15 Identities=40% Similarity=0.556 Sum_probs=11.2
Q ss_pred eeeeCCCCCCccccc
Q psy4991 107 VIHYDLKPGKPLFLF 121 (122)
Q Consensus 107 i~h~dlk~~nill~~ 121 (122)
+.|+|+.+.||+++.
T Consensus 181 lcH~Dl~~~Nil~~~ 195 (302)
T cd05156 181 FCHNDLQEGNILLLN 195 (302)
T ss_pred EEecCCCcCeEEecC
Confidence 368888888888764
No 488
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=74.73 E-value=1.5 Score=28.82 Aligned_cols=45 Identities=13% Similarity=0.048 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHhhCCCC--Cccceeeeee-----eCCCeEEEEEeccCCCCH
Q psy4991 15 PRHALREYNIHKALDHP--RVVKLYDVFE-----IDANSFCTVLEYCDGHDL 59 (122)
Q Consensus 15 ~~~~~~e~~~l~~~~h~--~i~~~~~~~~-----~~~~~~~lv~e~~~~~~L 59 (122)
......|++++..+... .+..++.... ...+..+++++|++|.++
T Consensus 50 ~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i~G~~~ 101 (296)
T cd05153 50 AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFLAGEHL 101 (296)
T ss_pred hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeCCCCCC
Confidence 35566788877777432 2444433211 123446789999987654
No 489
>PRK12396 5-methylribose kinase; Reviewed
Probab=73.58 E-value=1.5 Score=30.60 Aligned_cols=16 Identities=31% Similarity=0.403 Sum_probs=14.5
Q ss_pred CeeeeCCCCCCccccc
Q psy4991 106 PVIHYDLKPGKPLFLF 121 (122)
Q Consensus 106 ~i~h~dlk~~nill~~ 121 (122)
.++|+|+.|.|||+++
T Consensus 228 aLlHGDlHtGSI~v~~ 243 (409)
T PRK12396 228 ALIHGDLHTGSVFVKN 243 (409)
T ss_pred hhccCcCCCCCEEecC
Confidence 4899999999999975
No 490
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=73.40 E-value=20 Score=22.57 Aligned_cols=56 Identities=23% Similarity=0.184 Sum_probs=35.1
Q ss_pred CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCcc-ceeeeeeeCCCeEEEEEeccCCCCHHHHHH
Q psy4991 1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVV-KLYDVFEIDANSFCTVLEYCDGHDLDFYLK 64 (122)
Q Consensus 1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 64 (122)
+|+|+-..+ ..+..+..|+++|..+...++- .++.+-. -.+.|||..|.+|.....
T Consensus 48 ~a~Kvrr~d---s~r~~l~kEakiLeil~g~~~~p~vy~yg~-----~~i~me~i~G~~L~~~~~ 104 (201)
T COG2112 48 VALKVRRRD---SPRRNLEKEAKILEILAGEGVTPEVYFYGE-----DFIRMEYIDGRPLGKLEI 104 (201)
T ss_pred EEEEEecCC---cchhhHHHHHHHHHHhhhcCCCceEEEech-----hhhhhhhhcCcchhhhhh
Confidence 356655544 3457788999999988765542 3332222 225699999878866554
No 491
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=73.32 E-value=2 Score=30.02 Aligned_cols=42 Identities=26% Similarity=0.120 Sum_probs=27.6
Q ss_pred chHHHHHHHHHHhhC-C--CCCccceeeeeeeCCCeEEEEEeccCCCC
Q psy4991 14 FPRHALREYNIHKAL-D--HPRVVKLYDVFEIDANSFCTVLEYCDGHD 58 (122)
Q Consensus 14 ~~~~~~~e~~~l~~~-~--h~~i~~~~~~~~~~~~~~~lv~e~~~~~~ 58 (122)
..++...|.+.|+.+ . ...++.++.+-. ...+++|||+++..
T Consensus 73 ~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~---~~~~lVME~L~~~~ 117 (401)
T PRK09550 73 TLDRARIEAEALKIQAKYVPDLVPKVYHYDE---ELAVTVMEDLSDHK 117 (401)
T ss_pred cHHHHHHHHHHHHHHHhhCCCCCCeEEEECC---CCCEEEEecCCCcc
Confidence 346677788888876 2 245666666533 44568999998644
No 492
>PLN02236 choline kinase
Probab=73.10 E-value=2.1 Score=29.12 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=22.6
Q ss_pred HHHHHHHhhCCCCC-ccceeeeeeeCCCeEEEEEeccCCCCHH
Q psy4991 19 LREYNIHKALDHPR-VVKLYDVFEIDANSFCTVLEYCDGHDLD 60 (122)
Q Consensus 19 ~~e~~~l~~~~h~~-i~~~~~~~~~~~~~~~lv~e~~~~~~L~ 60 (122)
.+|..+++.+...+ -..+++.+. .+ .+.+|+++.++.
T Consensus 84 ~~E~~~~~~l~~~gl~P~~~~~~~-~g----~v~efi~g~~l~ 121 (344)
T PLN02236 84 DDEIRTFECMSRHGQGPRLLGRFP-NG----RVEEFIHARTLS 121 (344)
T ss_pred HHHHHHHHHHHHcCCCCceEEEEC-Cc----eEEEeeCCCCCC
Confidence 56888888774333 345556554 32 478898876653
No 493
>KOG1093|consensus
Probab=73.05 E-value=14 Score=27.46 Aligned_cols=52 Identities=19% Similarity=0.200 Sum_probs=42.0
Q ss_pred chHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhc
Q psy4991 14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH 66 (122)
Q Consensus 14 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 66 (122)
...+++....+++.+.|+|++...+..........+|+|++. .++.+.+..+
T Consensus 25 ~s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~-~Sled~~~~~ 76 (725)
T KOG1093|consen 25 NSIQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYT-MSLEDILKTG 76 (725)
T ss_pred cHHHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhc-cchHHHHHhc
Confidence 345667778889999999999999988655566889999996 8998888754
No 494
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=71.63 E-value=2.1 Score=29.53 Aligned_cols=16 Identities=25% Similarity=0.347 Sum_probs=14.2
Q ss_pred CeeeeCCCCCCccccc
Q psy4991 106 PVIHYDLKPGKPLFLF 121 (122)
Q Consensus 106 ~i~h~dlk~~nill~~ 121 (122)
.++|+|+.+.||++++
T Consensus 193 ~llHGDl~~gNi~~~~ 208 (370)
T TIGR01767 193 TLLHGDLHSGSIFVSE 208 (370)
T ss_pred eeeeccCCcccEEEcC
Confidence 4899999999999864
No 495
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=70.02 E-value=2.7 Score=26.06 Aligned_cols=16 Identities=25% Similarity=0.337 Sum_probs=13.8
Q ss_pred CeeeeCCCCCCccccc
Q psy4991 106 PVIHYDLKPGKPLFLF 121 (122)
Q Consensus 106 ~i~h~dlk~~nill~~ 121 (122)
.+.|+|+.+.|+++..
T Consensus 121 vl~HgD~~~~N~~~~~ 136 (196)
T smart00587 121 VLNHGDLWANNIMFKY 136 (196)
T ss_pred EEeeCCCCccceeecc
Confidence 3799999999999863
No 496
>KOG2137|consensus
Probab=70.00 E-value=2.6 Score=31.43 Aligned_cols=31 Identities=19% Similarity=0.336 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 90 VMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 90 ~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
+.+++.|+.|+|.. ..++|+.+.|++|.++.
T Consensus 105 l~~v~dgl~flh~s-Ak~VH~ni~p~~i~~na 135 (700)
T KOG2137|consen 105 LGNVADGLAFLHRS-AKVVHGNIQPEAIVVNA 135 (700)
T ss_pred hhcccchhhhhccC-cceeecccchhheeecc
Confidence 44556899999986 45999999999998863
No 497
>PTZ00384 choline kinase; Provisional
Probab=69.16 E-value=20 Score=25.02 Aligned_cols=37 Identities=30% Similarity=0.425 Sum_probs=25.5
Q ss_pred HHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHH
Q psy4991 19 LREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLD 60 (122)
Q Consensus 19 ~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~ 60 (122)
.+|.++++.+. +..-.++++.+. . +++.||++|.++.
T Consensus 100 ~~E~~i~~~Ls~~glgP~l~~~f~-~----g~l~efIeGr~l~ 137 (383)
T PTZ00384 100 DLQYNIAKLLGDNNFGPKIIGRFG-D----FTIQEWVEGNTMG 137 (383)
T ss_pred HHHHHHHHHHHhCCCCCeEEEecC-C----EEEEEEeccccCC
Confidence 46888888884 444456666664 2 4799999976663
No 498
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=67.15 E-value=3.4 Score=28.12 Aligned_cols=15 Identities=47% Similarity=0.614 Sum_probs=13.8
Q ss_pred eeeeCCCCCCccccc
Q psy4991 107 VIHYDLKPGKPLFLF 121 (122)
Q Consensus 107 i~h~dlk~~nill~~ 121 (122)
++|+|+-|.||+++.
T Consensus 199 iIH~D~~~~NVl~d~ 213 (331)
T COG2334 199 IIHGDLHPDNVLFDD 213 (331)
T ss_pred eeecCCCccceeEcC
Confidence 799999999999874
No 499
>KOG2464|consensus
Probab=66.75 E-value=12 Score=24.32 Aligned_cols=37 Identities=30% Similarity=0.220 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991 84 TSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF 121 (122)
Q Consensus 84 ~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~ 121 (122)
.+...++.|+...+.-.... ..+.|+|+-+.||++.+
T Consensus 137 ~~~~si~~q~~~~l~i~~~~-~~~~hrdl~~gnili~k 173 (246)
T KOG2464|consen 137 NQALSIFWQLVLSLAIAEKS-LGFEHRDLHLGNILIKK 173 (246)
T ss_pred HHHHHHHHHHHHHHHHhhhh-hcccccccCcCcEEEec
Confidence 35567788888777776654 23999999999999975
No 500
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=64.34 E-value=18 Score=25.54 Aligned_cols=66 Identities=18% Similarity=0.217 Sum_probs=36.0
Q ss_pred HHHHH---HhhCCCCCccceeeeee---eC--CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHH
Q psy4991 20 REYNI---HKALDHPRVVKLYDVFE---ID--ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVM 91 (122)
Q Consensus 20 ~e~~~---l~~~~h~~i~~~~~~~~---~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (122)
+|+.. +.+.+||++....-++. .+ ....+|+|||+++..-..... .++ ..-+.
T Consensus 115 rEv~~Y~~~~k~~~~~l~~PKvY~~k~f~~en~~kG~IimE~ven~~~~~~~e---------------~~~----~eql~ 175 (414)
T PF07914_consen 115 REVNFYKIFEKFNHPNLPYPKVYFGKKFDEENKLKGFIIMEYVENVHSMDMYE---------------NLS----VEQLL 175 (414)
T ss_pred HHHHHHHHHHhcCCCCCCCCceeEEEecCCCCCCCCEEEEeccCCceeecccC---------------CCC----HHHHH
Confidence 45554 45567777755544441 12 234789999998543222211 111 33456
Q ss_pred HHHHHHHHHHcCC
Q psy4991 92 QVVSALKYLNEIK 104 (122)
Q Consensus 92 ~i~~~l~~lh~~~ 104 (122)
+++.+++.+|..+
T Consensus 176 ~iv~aLA~~~A~s 188 (414)
T PF07914_consen 176 QIVRALAKFHALS 188 (414)
T ss_pred HHHHHHHHHHHhH
Confidence 6677777777654
Done!