BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy5
         (128 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9BUV8|CT024_HUMAN Uncharacterized protein C20orf24 OS=Homo sapiens GN=C20orf24 PE=2
           SV=1
          Length = 137

 Score =  119 bits (297), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 53/86 (61%), Positives = 69/86 (80%)

Query: 9   QDEFLDVIYWARQILGIILGIVWGFIPLRGFIGLALFALTNAGLLYLYIVNYQCVDEDEY 68
           +DEFLDVIYW RQI+ ++LG++WG +PLRGF+G+A F L NAG+LYLY  NY  +DE+EY
Sbjct: 38  KDEFLDVIYWFRQIIAVVLGVIWGVLPLRGFLGIAGFCLINAGVLYLYFSNYLQIDEEEY 97

Query: 69  GGTFEMAKEGFMTSFAAFLCVDEDEY 94
           GGT+E+ KEGFMTSFA F+    D +
Sbjct: 98  GGTWELTKEGFMTSFALFMVCVADSF 123


>sp|Q9CQT9|CT024_MOUSE Uncharacterized protein C20orf24 homolog OS=Mus musculus PE=2 SV=1
          Length = 129

 Score =  118 bits (295), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 52/81 (64%), Positives = 68/81 (83%)

Query: 9   QDEFLDVIYWARQILGIILGIVWGFIPLRGFIGLALFALTNAGLLYLYIVNYQCVDEDEY 68
           +DEFLDVIYW RQI+ ++LG++WG +PLRGF+G+A F L NAG+LYLY  NY  +DE+EY
Sbjct: 38  KDEFLDVIYWFRQIIALVLGVIWGVLPLRGFLGIAGFCLINAGVLYLYFSNYLQIDEEEY 97

Query: 69  GGTFEMAKEGFMTSFAAFLCV 89
           GGT+E+ KEGFMTSFA F+ +
Sbjct: 98  GGTWELTKEGFMTSFALFMVI 118


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.330    0.146    0.451 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,268,804
Number of Sequences: 539616
Number of extensions: 1999762
Number of successful extensions: 4666
Number of sequences better than 100.0: 4
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4660
Number of HSP's gapped (non-prelim): 6
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)