BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy5
MMLMIFVPQDEFLDVIYWARQILGIILGIVWGFIPLRGFIGLALFALTNAGLLYLYIVNY
QCVDEDEYGGTFEMAKEGFMTSFAAFLCVDEDEYGGTFEMAKEGFMTSFAAFLVSFSHQS
VLNILKDK

High Scoring Gene Products

Symbol, full name Information P value
C20H20orf24
Uncharacterized protein
protein from Gallus gallus 3.1e-28
C20orf24
Uncharacterized protein C20orf24
protein from Homo sapiens 1.0e-27
RGD1307752
similar to RIKEN cDNA 1110008F13
gene from Rattus norvegicus 1.3e-27
1110008F13Rik
RIKEN cDNA 1110008F13 gene
protein from Mus musculus 2.2e-27
RIP5
Uncharacterized protein
protein from Bos taurus 3.5e-27
F44E7.9 gene from Caenorhabditis elegans 3.0e-14
AT5G59410 protein from Arabidopsis thaliana 9.1e-13
AT2G29020 protein from Arabidopsis thaliana 1.9e-12
DDB_G0289011
putative Rab5-interacting protein (Rab5ip)
gene from Dictyostelium discoideum 2.9e-09

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy5
        (128 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|F1NXV3 - symbol:C20H20orf24 "Uncharacterized pr...   315  3.1e-28   1
UNIPROTKB|H0YNI0 - symbol:TGIF2-C20ORF24 "Protein TGIF2-C...   313  5.0e-28   1
UNIPROTKB|Q9BUV8 - symbol:C20orf24 "Uncharacterized prote...   310  1.0e-27   1
RGD|1307752 - symbol:RGD1307752 "similar to RIKEN cDNA 11...   309  1.3e-27   1
MGI|MGI:1914638 - symbol:1110008F13Rik "RIKEN cDNA 111000...   307  2.2e-27   1
UNIPROTKB|Q3T187 - symbol:RIP5 "Uncharacterized protein" ...   305  3.5e-27   1
WB|WBGene00018431 - symbol:F44E7.9 species:6239 "Caenorha...   183  3.0e-14   1
TAIR|locus:2148353 - symbol:AT5G59410 "AT5G59410" species...   169  9.1e-13   1
TAIR|locus:2066081 - symbol:AT2G29020 "AT2G29020" species...   166  1.9e-12   1
DICTYBASE|DDB_G0289011 - symbol:DDB_G0289011 "putative Ra...   136  2.9e-09   1


>UNIPROTKB|F1NXV3 [details] [associations]
            symbol:C20H20orf24 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
            GO:GO:0005739 InterPro:IPR010742 PANTHER:PTHR12906
            GeneTree:ENSGT00390000004786 OMA:SEWPDKD EMBL:AADN02019547
            IPI:IPI00601550 Ensembl:ENSGALT00000001580 Uniprot:F1NXV3
        Length = 135

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 53/81 (65%), Positives = 70/81 (86%)

Query:     9 QDEFLDVIYWARQILGIILGIVWGFIPLRGFIGLALFALTNAGLLYLYIVNYQCVDEDEY 68
             +DEFLDVIYW RQI+ +ILG++WG +PL+GF+G+A+F L NAG+LYLY  ++Q +DE+EY
Sbjct:    44 KDEFLDVIYWFRQIIAVILGVIWGVVPLKGFVGIAIFCLINAGVLYLYFSSFQQIDEEEY 103

Query:    69 GGTFEMAKEGFMTSFAAFLCV 89
             GGT+E+ KEGFMTSFA FL V
Sbjct:   104 GGTWELTKEGFMTSFALFLVV 124

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 22/32 (68%), Positives = 28/32 (87%)

Query:    83 FAAFLCVDEDEYGGTFEMAKEGFMTSFAAFLV 114
             F++F  +DE+EYGGT+E+ KEGFMTSFA FLV
Sbjct:    92 FSSFQQIDEEEYGGTWELTKEGFMTSFALFLV 123


>UNIPROTKB|H0YNI0 [details] [associations]
            symbol:TGIF2-C20ORF24 "Protein TGIF2-C20ORF24" species:9606
            "Homo sapiens" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR008422 InterPro:IPR009057
            Pfam:PF05920 SMART:SM00389 GO:GO:0005739 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            EMBL:AL050318 UniGene:Hs.584985 InterPro:IPR010742
            PANTHER:PTHR12906 RefSeq:NP_001186464.1 ProteinModelPortal:H0YNI0
            SMR:H0YNI0 Ensembl:ENST00000558530 GeneID:100527943
            KEGG:hsa:100527943 CTD:100527943 ChiTaRS:TGIF2-C20ORF24
            GenomeRNAi:100527943 Uniprot:H0YNI0
        Length = 155

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 54/83 (65%), Positives = 69/83 (83%)

Query:     7 VPQDEFLDVIYWARQILGIILGIVWGFIPLRGFIGLALFALTNAGLLYLYIVNYQCVDED 66
             V QDEFLDVIYW RQI+ ++LG++WG +PLRGF+G+A F L NAG+LYLY  NY  +DE+
Sbjct:    62 VLQDEFLDVIYWFRQIIAVVLGVIWGVLPLRGFLGIAGFCLINAGVLYLYFSNYLQIDEE 121

Query:    67 EYGGTFEMAKEGFMTSFAAFLCV 89
             EYGGT+E+ KEGFMTSFA F+ +
Sbjct:   122 EYGGTWELTKEGFMTSFALFMVI 144

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 21/32 (65%), Positives = 28/32 (87%)

Query:    83 FAAFLCVDEDEYGGTFEMAKEGFMTSFAAFLV 114
             F+ +L +DE+EYGGT+E+ KEGFMTSFA F+V
Sbjct:   112 FSNYLQIDEEEYGGTWELTKEGFMTSFALFMV 143


>UNIPROTKB|Q9BUV8 [details] [associations]
            symbol:C20orf24 "Uncharacterized protein C20orf24"
            species:9606 "Homo sapiens" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] EMBL:CH471077
            EMBL:AF112213 EMBL:AF274936 EMBL:AL050318 EMBL:BC001871
            EMBL:BC004446 EMBL:S83364 IPI:IPI00030898 IPI:IPI00216578
            IPI:IPI00216579 IPI:IPI00216581 RefSeq:NP_001186463.1
            RefSeq:NP_061328.1 RefSeq:NP_955777.1 UniGene:Hs.584985
            ProteinModelPortal:Q9BUV8 IntAct:Q9BUV8 STRING:Q9BUV8
            PhosphoSite:Q9BUV8 DMDM:24211596 PRIDE:Q9BUV8 DNASU:55969
            Ensembl:ENST00000344795 Ensembl:ENST00000373852
            Ensembl:ENST00000483815 Ensembl:ENST00000492721 GeneID:55969
            KEGG:hsa:55969 UCSC:uc002xfo.3 UCSC:uc002xfs.3 CTD:55969
            GeneCards:GC20P035234 HGNC:HGNC:15870 neXtProt:NX_Q9BUV8
            PharmGKB:PA25740 eggNOG:NOG311375 HOVERGEN:HBG051153 OMA:FDSEASW
            OrthoDB:EOG4QVCDC GenomeRNAi:55969 NextBio:61397
            ArrayExpress:Q9BUV8 Bgee:Q9BUV8 CleanEx:HS_C20orf24
            Genevestigator:Q9BUV8 GermOnline:ENSG00000101084 InterPro:IPR010742
            PANTHER:PTHR12906 Uniprot:Q9BUV8
        Length = 137

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 54/82 (65%), Positives = 69/82 (84%)

Query:     9 QDEFLDVIYWARQILGIILGIVWGFIPLRGFIGLALFALTNAGLLYLYIVNYQCVDEDEY 68
             +DEFLDVIYW RQI+ ++LG++WG +PLRGF+G+A F L NAG+LYLY  NY  +DE+EY
Sbjct:    38 KDEFLDVIYWFRQIIAVVLGVIWGVLPLRGFLGIAGFCLINAGVLYLYFSNYLQIDEEEY 97

Query:    69 GGTFEMAKEGFMTSFAAFL-CV 89
             GGT+E+ KEGFMTSFA F+ CV
Sbjct:    98 GGTWELTKEGFMTSFALFMVCV 119

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 21/32 (65%), Positives = 28/32 (87%)

Query:    83 FAAFLCVDEDEYGGTFEMAKEGFMTSFAAFLV 114
             F+ +L +DE+EYGGT+E+ KEGFMTSFA F+V
Sbjct:    86 FSNYLQIDEEEYGGTWELTKEGFMTSFALFMV 117


>RGD|1307752 [details] [associations]
            symbol:RGD1307752 "similar to RIKEN cDNA 1110008F13"
            species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
            evidence=IEA;ISO] RGD:1307752 GO:GO:0005739 EMBL:CH474050
            eggNOG:NOG311375 HOVERGEN:HBG051153 OrthoDB:EOG4QVCDC
            InterPro:IPR010742 PANTHER:PTHR12906 GeneTree:ENSGT00390000004786
            HOGENOM:HOG000232040 OMA:SEWPDKD EMBL:BC089919 IPI:IPI00373344
            RefSeq:NP_001013944.1 UniGene:Rn.11832 STRING:Q5FVK9
            Ensembl:ENSRNOT00000027539 GeneID:296315 KEGG:rno:296315
            UCSC:RGD:1307752 CTD:296315 InParanoid:Q5FVK9 NextBio:641007
            Genevestigator:Q5FVK9 Uniprot:Q5FVK9
        Length = 129

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 52/81 (64%), Positives = 68/81 (83%)

Query:     9 QDEFLDVIYWARQILGIILGIVWGFIPLRGFIGLALFALTNAGLLYLYIVNYQCVDEDEY 68
             +DEFLDVIYW RQI+ ++LG++WG +PLRGF+G+A F L NAG+LYLY  NY  +DE+EY
Sbjct:    38 KDEFLDVIYWFRQIIAVVLGVIWGILPLRGFLGIAGFCLINAGVLYLYFSNYLQIDEEEY 97

Query:    69 GGTFEMAKEGFMTSFAAFLCV 89
             GGT+E+ KEGFMTSFA F+ +
Sbjct:    98 GGTWELTKEGFMTSFALFMVI 118

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 21/32 (65%), Positives = 28/32 (87%)

Query:    83 FAAFLCVDEDEYGGTFEMAKEGFMTSFAAFLV 114
             F+ +L +DE+EYGGT+E+ KEGFMTSFA F+V
Sbjct:    86 FSNYLQIDEEEYGGTWELTKEGFMTSFALFMV 117


>MGI|MGI:1914638 [details] [associations]
            symbol:1110008F13Rik "RIKEN cDNA 1110008F13 gene"
            species:10090 "Mus musculus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0008150
            "biological_process" evidence=ND] MGI:MGI:1914638 GO:GO:0005739
            eggNOG:NOG311375 HOVERGEN:HBG051153 OrthoDB:EOG4QVCDC
            InterPro:IPR010742 PANTHER:PTHR12906 EMBL:AK003568 EMBL:AK002452
            EMBL:BC019445 IPI:IPI00133085 RefSeq:NP_080400.1 UniGene:Mm.29264
            STRING:Q9CQT9 PhosphoSite:Q9CQT9 PRIDE:Q9CQT9
            Ensembl:ENSMUST00000029165 GeneID:67388 KEGG:mmu:67388
            GeneTree:ENSGT00390000004786 HOGENOM:HOG000232040 InParanoid:Q9CQT9
            OMA:SEWPDKD NextBio:324424 Bgee:Q9CQT9 CleanEx:MM_1110008F13RIK
            Genevestigator:Q9CQT9 GermOnline:ENSMUSG00000027637 Uniprot:Q9CQT9
        Length = 129

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 52/81 (64%), Positives = 68/81 (83%)

Query:     9 QDEFLDVIYWARQILGIILGIVWGFIPLRGFIGLALFALTNAGLLYLYIVNYQCVDEDEY 68
             +DEFLDVIYW RQI+ ++LG++WG +PLRGF+G+A F L NAG+LYLY  NY  +DE+EY
Sbjct:    38 KDEFLDVIYWFRQIIALVLGVIWGVLPLRGFLGIAGFCLINAGVLYLYFSNYLQIDEEEY 97

Query:    69 GGTFEMAKEGFMTSFAAFLCV 89
             GGT+E+ KEGFMTSFA F+ +
Sbjct:    98 GGTWELTKEGFMTSFALFMVI 118

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 21/32 (65%), Positives = 28/32 (87%)

Query:    83 FAAFLCVDEDEYGGTFEMAKEGFMTSFAAFLV 114
             F+ +L +DE+EYGGT+E+ KEGFMTSFA F+V
Sbjct:    86 FSNYLQIDEEEYGGTWELTKEGFMTSFALFMV 117


>UNIPROTKB|Q3T187 [details] [associations]
            symbol:RIP5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739
            eggNOG:NOG311375 HOVERGEN:HBG051153 OrthoDB:EOG4QVCDC
            InterPro:IPR010742 PANTHER:PTHR12906 GeneTree:ENSGT00390000004786
            HOGENOM:HOG000232040 OMA:SEWPDKD EMBL:DAAA02036537 EMBL:BC102069
            IPI:IPI00714391 RefSeq:NP_001029593.1 UniGene:Bt.9706 STRING:Q3T187
            Ensembl:ENSBTAT00000029063 GeneID:512377 KEGG:bta:512377 CTD:512377
            InParanoid:Q3T187 NextBio:20870362 Uniprot:Q3T187
        Length = 129

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 51/81 (62%), Positives = 68/81 (83%)

Query:     9 QDEFLDVIYWARQILGIILGIVWGFIPLRGFIGLALFALTNAGLLYLYIVNYQCVDEDEY 68
             +DEFLDVIYW RQI+ ++LG++WG +PLRGF+G+A F L NAG+LY+Y  NY  +DE+EY
Sbjct:    38 KDEFLDVIYWFRQIIAVVLGVIWGVLPLRGFLGIAGFCLINAGVLYVYFSNYLQIDEEEY 97

Query:    69 GGTFEMAKEGFMTSFAAFLCV 89
             GGT+E+ KEGFMTSFA F+ +
Sbjct:    98 GGTWELTKEGFMTSFALFMVI 118

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 21/32 (65%), Positives = 28/32 (87%)

Query:    83 FAAFLCVDEDEYGGTFEMAKEGFMTSFAAFLV 114
             F+ +L +DE+EYGGT+E+ KEGFMTSFA F+V
Sbjct:    86 FSNYLQIDEEEYGGTWELTKEGFMTSFALFMV 117


>WB|WBGene00018431 [details] [associations]
            symbol:F44E7.9 species:6239 "Caenorhabditis elegans"
            [GO:0016021 "integral to membrane" evidence=IEA] eggNOG:NOG311375
            InterPro:IPR010742 PANTHER:PTHR12906 GeneTree:ENSGT00390000004786
            HOGENOM:HOG000232040 OMA:SEWPDKD EMBL:FO080929 PIR:T31718
            RefSeq:NP_504519.1 DIP:DIP-24856N IntAct:O16254 MINT:MINT-1082877
            STRING:O16254 PaxDb:O16254 EnsemblMetazoa:F44E7.9 GeneID:185741
            KEGG:cel:CELE_F44E7.9 UCSC:F44E7.9 CTD:185741 WormBase:F44E7.9
            InParanoid:O16254 NextBio:929346 Uniprot:O16254
        Length = 121

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 30/79 (37%), Positives = 54/79 (68%)

Query:     9 QDEFLDVIYWARQILGIILGIVWGFIPLRGFIGLALFALTNAGLLYLYIVNYQCVDEDEY 68
             +DE LDV+YW +Q++ ++LG ++G   L G + L  +  T++ + + ++  +Q VDE+E 
Sbjct:    30 KDELLDVVYWGKQVISLLLGFIFGITSLTGVLVLVCYVGTSSVIAHHFVTKFQRVDEEEV 89

Query:    69 GGTFEMAKEGFMTSFAAFL 87
             GG +E++KEGF  +FA F+
Sbjct:    90 GGFWELSKEGFGAAFATFM 108

 Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 32/93 (34%), Positives = 50/93 (53%)

Query:    26 ILGIV-WGFIPLRGFIGLALFALTN-AGLLYLYIVNYQCVDEDEYGGTFEMAKEGFMTSF 83
             +L +V WG   +   +G  +F +T+  G+L L      C     Y GT  +    F+T F
Sbjct:    33 LLDVVYWGKQVISLLLGF-IFGITSLTGVLVLV-----C-----YVGTSSVIAHHFVTKF 81

Query:    84 AAFLCVDEDEYGGTFEMAKEGFMTSFAAFLVSF 116
                  VDE+E GG +E++KEGF  +FA F+V++
Sbjct:    82 QR---VDEEEVGGFWELSKEGFGAAFATFMVTW 111


>TAIR|locus:2148353 [details] [associations]
            symbol:AT5G59410 "AT5G59410" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002688 InterPro:IPR010742 PANTHER:PTHR12906
            OMA:SEWPDKD UniGene:At.29226 UniGene:At.9719
            ProtClustDB:CLSN2686459 EMBL:BT012589 IPI:IPI00516770
            RefSeq:NP_200749.1 PRIDE:Q6NKV4 EnsemblPlants:AT5G59410.1
            GeneID:836060 KEGG:ath:AT5G59410 TAIR:At5g59410 InParanoid:Q6NKV4
            PhylomeDB:Q6NKV4 Genevestigator:Q6NKV4 Uniprot:Q6NKV4
        Length = 130

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 31/79 (39%), Positives = 50/79 (63%)

Query:     9 QDEFLDVIYWARQILGIILGIVWGFIPLRGFIGLALFALTNAGLLYLYIVNYQCVDEDEY 68
             +D+  DV++W RQ++G+I G++WG IPL G I + LF   ++G++Y Y      VDE+++
Sbjct:    40 KDQLGDVLHWIRQVVGLISGLLWGSIPLVGGIWIILFLAISSGIVYGYYAMILKVDEEDF 99

Query:    69 GGTFEMAKEGFMTSFAAFL 87
             GG   + +EG   S   FL
Sbjct:   100 GGHAALLQEGLFASLTLFL 118


>TAIR|locus:2066081 [details] [associations]
            symbol:AT2G29020 "AT2G29020" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005315
            eggNOG:NOG311375 OMA:FDSEASW InterPro:IPR010742 PANTHER:PTHR12906
            HOGENOM:HOG000232040 EMBL:AY072014 EMBL:AY084263 EMBL:AY122888
            EMBL:AK226975 IPI:IPI00540477 PIR:T02733 RefSeq:NP_565679.1
            UniGene:At.28273 STRING:O81071 PaxDb:O81071 PRIDE:O81071
            EnsemblPlants:AT2G29020.1 GeneID:817451 KEGG:ath:AT2G29020
            TAIR:At2g29020 InParanoid:O81071 PhylomeDB:O81071
            ProtClustDB:CLSN2686459 ArrayExpress:O81071 Genevestigator:O81071
            Uniprot:O81071
        Length = 133

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 29/79 (36%), Positives = 51/79 (64%)

Query:     9 QDEFLDVIYWARQILGIILGIVWGFIPLRGFIGLALFALTNAGLLYLYIVNYQCVDEDEY 68
             +D+  DV++W RQ++G++ G++WG IPL G I L LF   ++G++Y Y      +DE+++
Sbjct:    43 KDQLGDVLHWIRQVVGLLCGLLWGAIPLVGGIWLLLFLAISSGIVYGYYALVLKIDEEDF 102

Query:    69 GGTFEMAKEGFMTSFAAFL 87
             GG   + ++G   S + FL
Sbjct:   103 GGHAALLQDGLFASLSLFL 121


>DICTYBASE|DDB_G0289011 [details] [associations]
            symbol:DDB_G0289011 "putative Rab5-interacting
            protein (Rab5ip)" species:44689 "Dictyostelium discoideum"
            [GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0289011
            EMBL:AAFI02000129 eggNOG:NOG311375 InterPro:IPR010742
            PANTHER:PTHR12906 RefSeq:XP_636421.1 EnsemblProtists:DDB0188208
            GeneID:8626912 KEGG:ddi:DDB_G0289011 InParanoid:Q54I50 OMA:ISWIIAY
            ProtClustDB:CLSZ2731448 Uniprot:Q54I50
        Length = 113

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 26/77 (33%), Positives = 45/77 (58%)

Query:    11 EFLDVIYWARQILGIILGIVWGFIPLRGFIGLALFALTNAGLLYLYIVNYQCVDEDEYGG 70
             E    ++W RQI+ I++GI+ G IP+ GF G   F +   G + +Y      ++ED++  
Sbjct:    27 EIAQNVHWLRQIVSILVGIIVGSIPVIGFPGFIAFLIFTCGFVAIYYTKVLEIEEDDF-- 84

Query:    71 TFEMAKEGFMTSFAAFL 87
              +E+ +EGFM+S   F+
Sbjct:    85 KWELMREGFMSSLTIFV 101


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.330   0.146   0.451    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      128       128   0.00091  102 3  11 21  0.43    30
                                                     29  0.41    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  538 (57 KB)
  Total size of DFA:  120 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:04
  No. of threads or processors used:  24
  Search cpu time:  12.33u 0.09s 12.42t   Elapsed:  00:00:13
  Total cpu time:  12.33u 0.09s 12.42t   Elapsed:  00:00:17
  Start:  Thu Aug 15 13:28:04 2013   End:  Thu Aug 15 13:28:21 2013

Back to top