RPS-BLAST 2.2.26 [Sep-21-2011]

Database: pdb70 
           27,921 sequences; 6,701,793 total letters

Searching..................................................done

Query= psy5
         (128 letters)



>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
            acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
            synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
          Length = 2006

 Score = 38.5 bits (89), Expect = 3e-04
 Identities = 26/125 (20%), Positives = 40/125 (32%), Gaps = 30/125 (24%)

Query: 10   DEFLDVIYWARQILGI-ILGIVWGFIPLRGFIGLALFALTNAGLLYLYIVNYQCVDEDEY 68
            D         +   G  IL IV    P+   I    F       +     NY        
Sbjct: 1650 DNHF------KDTYGFSILDIVINN-PVNLTI---HFGGEKGKRIR---ENYS------- 1689

Query: 69   GGTFEMAKEGFMTSFAAFLCVDEDEYGGTFEMAKEGFM--TSF---AAFLVSFSHQSVLN 123
               FE   +G + +   F  ++E     TF  +++G +  T F   A  L+     +   
Sbjct: 1690 AMIFETIVDGKLKTEKIFKEINEHSTSYTFR-SEKGLLSATQFTQPALTLMEK---AAFE 1745

Query: 124  ILKDK 128
             LK K
Sbjct: 1746 DLKSK 1750


  Database: pdb70
    Posted date:  Sep 4, 2012  3:40 AM
  Number of letters in database: 6,701,793
  Number of sequences in database:  27,921
  
Lambda     K      H
   0.330    0.146    0.451 

Gapped
Lambda     K      H
   0.267   0.0616    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,095,147
Number of extensions: 124053
Number of successful extensions: 286
Number of sequences better than 10.0: 1
Number of HSP's gapped: 286
Number of HSP's successfully gapped: 24
Length of query: 128
Length of database: 6,701,793
Length adjustment: 83
Effective length of query: 45
Effective length of database: 4,384,350
Effective search space: 197295750
Effective search space used: 197295750
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 51 (23.7 bits)