BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy50
(505 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|156551465|ref|XP_001604860.1| PREDICTED: putative GTP-binding protein 6-like isoform 1 [Nasonia
vitripennis]
gi|345480567|ref|XP_003424173.1| PREDICTED: putative GTP-binding protein 6-like isoform 2 [Nasonia
vitripennis]
Length = 472
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/430 (45%), Positives = 273/430 (63%), Gaps = 12/430 (2%)
Query: 66 ESDEFKTIRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWR 125
E+ E+ I +E GA+ H+ FV+QP+IKWGK K NT RD LAE+ ALV ++ W
Sbjct: 50 ENPEYNEISNE-YLGAIAKGHRTFVIQPYIKWGKGKKYNTNRDLQLAEAVALVETLPHWT 108
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VVD + LL+ +++ FG G+LE +K +V+ VTA+F+S + LK Q L+ +F V
Sbjct: 109 VVDKMCVPLLTLEREQLFGSGSLENVKTRVKCGRNVTAIFISTNTLKHVQLLELEKIFGV 168
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKRMV 245
PV+DRY +VI IF+ HA + EA+LQ+A+AELPY++ + + N+ L+ +R+
Sbjct: 169 PVYDRYSLVIHIFRCHAMSPEAKLQVALAELPYIYKKMSELCGRINL------LEKRRLY 222
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR 305
L RE +L+ AL KLK R+ +R K++ + F TVAVVGYTN GKT+LIKALT D+ L PR
Sbjct: 223 LQAREAQLRTALKKLKNNRDTIRKKRKNRGFATVAVVGYTNAGKTSLIKALTSDEMLKPR 282
Query: 306 NQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVD 365
N LFATLD T HEG LP +++LY+DTIGFI ++P TL+EPF TL+DAM+ADII+HV D
Sbjct: 283 NVLFATLDTTAHEGYLPCNMKVLYIDTIGFIQDVPETLIEPFVATLDDAMIADIIVHVYD 342
Query: 366 VSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGT 425
S+PD Q HV +TL+ L + L + V NK D + G E L ISA +
Sbjct: 343 ASHPDKEAQIDHVRKTLKSLTDGNRPL---IEVANKCDLIEAG--TLPEETLGISAKTTS 397
Query: 426 GLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVV 485
G+ L+ +++ +L TGR I MRV SG WL K V N D + LLLDVV
Sbjct: 398 GIDVLRHEIEKKVLSETGRSVIKMRVESGSEAAAWLYKEATVVNAEADPKDPQFLLLDVV 457
Query: 486 MTDVIMNKFK 495
+T+ +++F+
Sbjct: 458 VTENTLHRFR 467
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 1 MESDEFKTIRDEAQTGALGTDHQVFVIQPFIKWGKKMKRNTTRDFMLAESKALVK 55
+E+ E+ I +E GA+ H+ FVIQP+IKWGK K NT RD LAE+ ALV+
Sbjct: 49 LENPEYNEISNE-YLGAIAKGHRTFVIQPYIKWGKGKKYNTNRDLQLAEAVALVE 102
>gi|380023685|ref|XP_003695645.1| PREDICTED: putative GTP-binding protein 6-like [Apis florea]
Length = 452
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/422 (46%), Positives = 276/422 (65%), Gaps = 9/422 (2%)
Query: 80 GALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDK 139
G++ +++VFV+QP+IKWG K KRNTT LAE+ L++++ W VV I+ LLS K
Sbjct: 35 GSIIGENRVFVIQPYIKWGVKKKRNTTPQLQLAEAITLINTLPNWSVVGKKIVPLLSLQK 94
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
G G LE LK+ + VTA+F+S ++LK Q LQ++F +P++DRY IVI IF+
Sbjct: 95 HKLVGSGTLETLKKDITNCPNVTAIFISTNLLKFVQIAELQNIFHLPIYDRYSIVIHIFR 154
Query: 200 AHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKRMVLME-REQKLKKALN 258
HAK+ EA+LQ+AIAE+PY+ R + I D TN I + D K L++ RE+KL+ AL
Sbjct: 155 EHAKSPEAKLQVAIAEIPYV--RKKMI-DLTNYLIGQVKFDEKTKNLLQIREKKLRNALK 211
Query: 259 KLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHE 318
KLK R+M++ + FPT+A+VGYTN GKT+LIKALT+D SL P N+LFATLD T H+
Sbjct: 212 KLKEHRQMIKRHRSSYGFPTIAIVGYTNAGKTSLIKALTEDASLQPENKLFATLDTTVHQ 271
Query: 319 GMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHV 378
G+LPN L++LY+DTIGFI ++P TLLEPF VTLEDA+ ADI+IHV D+S+PD Q QHV
Sbjct: 272 GLLPNSLKVLYIDTIGFIQDVPETLLEPFLVTLEDAISADILIHVFDISHPDVKAQIQHV 331
Query: 379 DETLQHLELEEKILEHVLVVGNKVDAVPPG--ERVTEEYDLLISATRGTGLAQLKEKVQD 436
+T+Q + E KI ++ V NK D V E V E +SA + G+ L+ K+Q+
Sbjct: 332 QKTIQSIIDENKI---IINVANKCDMVEKNEIEDVLPEDAFTVSAIKLKGIDLLRLKIQE 388
Query: 437 MILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKH 496
I+ ++V +G E WL K T V N+ D ++++L++DV MT I KFK
Sbjct: 389 EIIHTANLIQKRIKVGNGSVEASWLYKETTVLNVIPDPKNSQYLIMDVFMTTPIFYKFKR 448
Query: 497 EF 498
F
Sbjct: 449 VF 450
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 16 GALGTDHQVFVIQPFIKWGKKMKRNTTRDFMLAESKALVKFSDN 59
G++ +++VFVIQP+IKWG K KRNTT LAE+ L+ N
Sbjct: 35 GSIIGENRVFVIQPYIKWGVKKKRNTTPQLQLAEAITLINTLPN 78
>gi|328792728|ref|XP_394260.3| PREDICTED: putative GTP-binding protein 6-like [Apis mellifera]
Length = 438
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/422 (46%), Positives = 277/422 (65%), Gaps = 9/422 (2%)
Query: 80 GALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDK 139
G++ ++VFV+QP+IKWG + KRNTT LAE+ AL++++ W VV I+ LLS K
Sbjct: 21 GSIINGNRVFVIQPYIKWGVQKKRNTTPQLQLAEAIALINTLPNWSVVGKKIVPLLSLQK 80
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
G G LE LK+ + VTA+F+S ++LK Q LQ++F +P++DRY I+I IF+
Sbjct: 81 HKLVGSGGLETLKKDITNCPNVTAIFISTNLLKFIQIAELQNIFHLPIYDRYSIIIHIFR 140
Query: 200 AHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSK-RMVLMEREQKLKKALN 258
HAK+ EA+LQ+AIAE+PY+ R + I D TN I + D K + +L RE+KL+ AL
Sbjct: 141 EHAKSPEAKLQVAIAEIPYV--RKKMI-DLTNYLIRQVKFDEKTKNLLQTREKKLRNALK 197
Query: 259 KLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHE 318
KLK R+M++ + FPT+A+VGYTN GKT+LIKALT D SL P N+LFATLD T H+
Sbjct: 198 KLKEHRQMIKRHRTSYGFPTIAIVGYTNAGKTSLIKALTGDTSLQPENKLFATLDTTVHQ 257
Query: 319 GMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHV 378
G+LPN L++LY+DTIGFI ++P TLLEPF VTLEDA+ A I+IHV D+S+PD Q +H+
Sbjct: 258 GLLPNNLKVLYIDTIGFIQDVPETLLEPFLVTLEDAINAHILIHVFDISHPDVKAQIEHI 317
Query: 379 DETLQHLELEEKILEHVLVVGNKVDAVPPG--ERVTEEYDLLISATRGTGLAQLKEKVQD 436
+T+Q + E K+ ++ V NK D V E + E ISAT+ G+ L+ K+Q+
Sbjct: 318 QKTIQPMIDENKV---IINVANKCDMVDKNEIENLLPEDAFTISATKLKGIDLLRSKIQE 374
Query: 437 MILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKH 496
I+ A ++V +G +E WL K T V N+ D ++++L++DV MT I KFK
Sbjct: 375 EIIHAANLIQKRIKVGNGSAEASWLYKETTVLNVIPDSKNSQYLIMDVFMTTPIFYKFKR 434
Query: 497 EF 498
F
Sbjct: 435 IF 436
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 16 GALGTDHQVFVIQPFIKWGKKMKRNTTRDFMLAESKALVKFSDN 59
G++ ++VFVIQP+IKWG + KRNTT LAE+ AL+ N
Sbjct: 21 GSIINGNRVFVIQPYIKWGVQKKRNTTPQLQLAEAIALINTLPN 64
>gi|307174543|gb|EFN64993.1| Putative GTP-binding protein 6 [Camponotus floridanus]
Length = 476
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/445 (43%), Positives = 291/445 (65%), Gaps = 15/445 (3%)
Query: 55 KFSDNSQD--DLEESDEFKTIRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLA 112
+F+ NS++ D + + + I ++ ALG H+ F++QP+IKWG+ KRNT+ + +A
Sbjct: 38 RFNHNSEEYADDQNQEVYTKISNQYLGTALG-GHRAFILQPYIKWGRDKKRNTSPELQMA 96
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E+ AL++++ W VV + LLS +KS G G +E LK+++ TA+FVS ++LK
Sbjct: 97 EAVALINTLSNWCVVGAKYAPLLSLQRKSLLGTGAMENLKKELYKCENPTAIFVSTNLLK 156
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
Q L+ + +PV+DRY IVI IF+ HAK+ EA+LQ+AIAE+PY+ R + +E +
Sbjct: 157 FIQIAELEKILGLPVYDRYSIVIHIFRQHAKSPEAKLQVAIAEIPYV--RKKILETSRTR 214
Query: 233 NITKGFLDSKRMVLM--EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKT 290
N G + ++++ LM RE+KL L KL+ R ++R+++++ FPTVAVVGYTN GKT
Sbjct: 215 N---GIIMTEKLKLMFDNREKKLNNELKKLQQHRTVIRSQRKKHGFPTVAVVGYTNAGKT 271
Query: 291 TLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVT 350
+LIKALTDD SL P N+LFATLD + H G+LPNR+++LY+DTIGFI ++P TL+EPF VT
Sbjct: 272 SLIKALTDDKSLQPENKLFATLDTSAHGGLLPNRMKVLYMDTIGFIQDVPETLIEPFIVT 331
Query: 351 LEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER 410
LEDAM+AD+I+H+ DVS+PD Q QHV +T++ + E ++ V NK D V
Sbjct: 332 LEDAMIADVIVHIYDVSHPDMKAQYQHVQQTIKPMIKEA---HPIIDVANKCDLV--QSD 386
Query: 411 VTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNI 470
+ + ISAT TG+ L++K++ ++L TG +RV SG WL K T V N
Sbjct: 387 CIPKDAIAISATNLTGIDLLRQKIEKVLLVTTGLLRTRIRVESGSPAASWLYKMTTVMNA 446
Query: 471 REDDTSAEHLLLDVVMTDVIMNKFK 495
+ D A++L++DV+ T + + KFK
Sbjct: 447 QSDPNDAQYLIMDVLATSIDIQKFK 471
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 6 FKTIRDEAQTGALGTDHQVFVIQPFIKWGKKMKRNTTRDFMLAESKALVKFSDN 59
+ I ++ ALG H+ F++QP+IKWG+ KRNT+ + +AE+ AL+ N
Sbjct: 55 YTKISNQYLGTALG-GHRAFILQPYIKWGRDKKRNTSPELQMAEAVALINTLSN 107
>gi|157118002|ref|XP_001658960.1| GTP-binding protein hflx [Aedes aegypti]
gi|108875896|gb|EAT40121.1| AAEL008133-PA [Aedes aegypti]
Length = 518
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 187/434 (43%), Positives = 291/434 (67%), Gaps = 18/434 (4%)
Query: 82 LGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKS 141
L + V V+QP++KWG K K + + L E++ALV S+ WRV S + L S +KK
Sbjct: 92 LQNEQHVLVIQPYVKWGPK-KSGSQPEHQLQEAEALVRSLPKWRVEYSLKVPLESLEKKQ 150
Query: 142 FFGKGNLELLKR-----QVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQ 196
FG G LE +K Q G +T VF+S L L Q+++L+ F++PV DRY +VIQ
Sbjct: 151 LFGAGKLEEIKAILSDLQTSGKL-ITCVFISKGTLTLGQKQLLEQHFKLPVMDRYSVVIQ 209
Query: 197 IFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKA 256
I + HA + EA+LQ+A+AE+PY+W++ + +DA+ + F +S++ +L RE+KLK
Sbjct: 210 ILRLHAISTEAKLQVAMAEIPYIWSQMKD-QDASKGRVY--FTESQKQMLRLRERKLKNE 266
Query: 257 LNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTT 316
L ++ RE++RNK++++ +P VAVVGYTN GKT+LIKALT++ SL P++QLFATLDVT
Sbjct: 267 LATIRSHRELLRNKRKQKAYPIVAVVGYTNAGKTSLIKALTEEKSLEPKDQLFATLDVTA 326
Query: 317 HEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQ 376
H G+LP +L +L++DT+GF+++IPT L+E F TLEDAMLAD+I+HV DVS+ ++L+QK+
Sbjct: 327 HAGLLPCKLEVLFMDTVGFMADIPTGLIECFVATLEDAMLADVIVHVQDVSHENFLEQKK 386
Query: 377 HVDETLQHLELEEKI------LEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQL 430
HV+ TL L + L++V+ VGNKVD +P E+ T+ + L+S+ G+ +L
Sbjct: 387 HVETTLSSLLKTTGVASSHPKLDNVINVGNKVDLLPTTEKPTDMH--LVSSKTLHGINEL 444
Query: 431 KEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVI 490
++++ IL+ TGR+ I +RV GGSE WL K+ AV+ D ++ +L+ V+T+
Sbjct: 445 LQEIERQILQVTGRQKIIIRVPMGGSEVAWLYKNAAVTETAADPKDSQRMLVSAVITEAK 504
Query: 491 MNKFKHEFISSRKR 504
+ +F+H+F+ + R
Sbjct: 505 LQQFRHQFVRNGAR 518
>gi|307207216|gb|EFN85006.1| Putative GTP-binding protein 6 [Harpegnathos saltator]
Length = 477
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 189/423 (44%), Positives = 278/423 (65%), Gaps = 11/423 (2%)
Query: 76 EAQTGALGT--DHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIIS 133
E + +GT H++FV+QP+IKWG+ KRNTT + LAE+ ALV+++ W VV +
Sbjct: 58 ELSSRCIGTAVGHRIFVLQPYIKWGRDKKRNTTPELQLAEAVALVNTLPYWCVVGTKYAP 117
Query: 134 LLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMI 193
LL+ +KS G G++E LK+++R TA+FVS + LK Q L+ +F +PV+DRY I
Sbjct: 118 LLTLQRKSLLGTGSIEDLKKEMRTSENPTAIFVSTNQLKFVQMLELEKIFGLPVYDRYSI 177
Query: 194 VIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKL 253
VI IF+ HAKT EA+LQ+A+AE+PY+ R + +E + +++L +E++L
Sbjct: 178 VIHIFREHAKTPEAKLQVALAEIPYI--RRKVLETCITSCGAINMTEKMKLLLDNKEKRL 235
Query: 254 KKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLD 313
K L KLK R+++RN ++ PTVAVVGYTN GKT+LIKALTDD SL P+N+LFATLD
Sbjct: 236 KSDLKKLKQHRQLIRNHRKNTGIPTVAVVGYTNSGKTSLIKALTDDKSLQPKNKLFATLD 295
Query: 314 VTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQ 373
T H GML NRL+ILY+DTIGFI ++P TL+EPF VTLEDA++AD+IIH+ D+S+PD
Sbjct: 296 TTAHRGMLLNRLKILYMDTIGFIQDVPETLIEPFVVTLEDAIIADVIIHIFDISHPDMKA 355
Query: 374 QKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLL-ISATRGTGLAQLKE 432
Q QHV +T++ + E++ V+ V NK D V E D++ +S+T+ TG+ L+
Sbjct: 356 QYQHVQQTIKPMIGEDR---PVIDVANKCDLV---ESDCIPKDVIAVSSTKLTGIDLLRL 409
Query: 433 KVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMN 492
+++ ++L G +RV SG WL K T V+N D A++L+++V+ T +
Sbjct: 410 EIEKILLDNIGLLRTRVRVESGSPAASWLYKWTTVTNAAPDPDDAQYLIMNVLATSRDIE 469
Query: 493 KFK 495
+FK
Sbjct: 470 EFK 472
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 12 EAQTGALGT--DHQVFVIQPFIKWGKKMKRNTTRDFMLAESKALV 54
E + +GT H++FV+QP+IKWG+ KRNTT + LAE+ ALV
Sbjct: 58 ELSSRCIGTAVGHRIFVLQPYIKWGRDKKRNTTPELQLAEAVALV 102
>gi|350407205|ref|XP_003488015.1| PREDICTED: putative GTP-binding protein 6-like [Bombus impatiens]
Length = 453
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 190/430 (44%), Positives = 270/430 (62%), Gaps = 12/430 (2%)
Query: 81 ALGT---DHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSF 137
LGT ++VFV+QP+IKWG KRNTT LAE+KAL++++ W VV ++ LL+
Sbjct: 30 CLGTAIDGNRVFVIQPYIKWGINKKRNTTPQLQLAEAKALINTLTNWSVVGEKLVPLLTL 89
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
+K G G LE LK +R VT +F+S ++LK Q LQ Q+P++DRY IVI I
Sbjct: 90 NKNKLVGVGALESLKEDIRKCPHVTCIFISTNLLKFVQIAELQKALQLPIYDRYSIVIHI 149
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITK-GFLDSKRMVLMEREQKLKKA 256
F+ HAKT EA+LQ+A+AELPY+ + + D +N +I + + + + +L RE+KLK A
Sbjct: 150 FREHAKTPEAKLQVALAELPYIKQK---MMDLSNYHIGRINYTEKMKNMLQTREKKLKNA 206
Query: 257 LNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTT 316
L +LK R+ +R + FP++A++GYTN GKT+LIKALT++ SL P ++LFATLD T
Sbjct: 207 LQRLKEHRQRIRQHRVNYGFPSIAIIGYTNAGKTSLIKALTNNASLQPEDKLFATLDTTV 266
Query: 317 HEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQ 376
H G+LPN L++LY+DTIGFI ++P L+EPF VTLEDA ADI+IHV DVS+PD Q Q
Sbjct: 267 HGGLLPNMLKVLYIDTIGFIQDVPEILIEPFIVTLEDATSADILIHVFDVSHPDVRAQIQ 326
Query: 377 HVDETLQHLELEEKILEHVLVVGNKVDAVPPG--ERVTEEYDLLISATRGTGLAQLKEKV 434
HV +T++ + E K+ ++ V NK D V E V E ISAT+ TG+ L+ K+
Sbjct: 327 HVQKTIETMVDENKV---IINVANKCDVVEKDVIENVIPENTFAISATKLTGIDLLRSKI 383
Query: 435 QDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKF 494
+ I RV +G +E WL K V + D + ++L++DV MT I KF
Sbjct: 384 EKEITNTPNLIKRRFRVGNGSTEASWLYKEATVLSAEPDPNNPQYLIMDVFMTLPIFYKF 443
Query: 495 KHEFISSRKR 504
K F +R +
Sbjct: 444 KRVFNLTRSK 453
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 17 ALGT---DHQVFVIQPFIKWGKKMKRNTTRDFMLAESKALV 54
LGT ++VFVIQP+IKWG KRNTT LAE+KAL+
Sbjct: 30 CLGTAIDGNRVFVIQPYIKWGINKKRNTTPQLQLAEAKALI 70
>gi|195036624|ref|XP_001989770.1| GH18978 [Drosophila grimshawi]
gi|193893966|gb|EDV92832.1| GH18978 [Drosophila grimshawi]
Length = 519
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 189/443 (42%), Positives = 274/443 (61%), Gaps = 19/443 (4%)
Query: 75 DEAQTGAL------GTDHQVFVVQPFIKW-GKKMKRNTTR-DFMLAESKALVSSIQGWRV 126
DE GA+ T VF++QP++KW K+ N R D L E+ AL+ S+ W+V
Sbjct: 78 DEVAGGAMRISRDVATAQHVFILQPYVKWSAKRTTPNDVRPDDQLIEATALIHSLPNWQV 137
Query: 127 VDSTIISLLSFDKKSFFGKGNLELLKR---QVRGDARVTAVFVSVDVLKLHQQKMLQDLF 183
+ + L S ++K+ FG G L LK+ Q+R + ++ VFVS L Q++ L+ F
Sbjct: 138 ARALKVPLESLERKTLFGSGKLTELKQLIAQLREERHISCVFVSKGTLSFAQKQFLESEF 197
Query: 184 QVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKR 243
Q+PV DRY +VIQI + HA T EARLQ+A+AELPY+W + + D ++
Sbjct: 198 QLPVLDRYSVVIQILRLHATTAEARLQVAMAELPYIWAQAKDASATQTRRQGYSLSDLQK 257
Query: 244 MVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLV 303
+L RE+KL+ L+ ++ QR+++R K+++Q +P AVVGYTN GKT+LIKALT +DSL
Sbjct: 258 EILRTRERKLRAELDAVRRQRQLLRQKRKQQNYPIAAVVGYTNAGKTSLIKALTVEDSLQ 317
Query: 304 PRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHV 363
PRNQLFATLDVT H G LP L+++Y+DT+GF+S++PT L E F TLEDAMLADIIIHV
Sbjct: 318 PRNQLFATLDVTAHAGSLPCNLQLIYMDTVGFMSDLPTGLFECFVATLEDAMLADIIIHV 377
Query: 364 VDVSNPDYLQQKQHVDETLQHLEL-------EEKILEHVLVVGNKVDAVPPGERVTEEYD 416
D+S+P + Q+ HV+ TL+ L L ++ V NK D V P + T
Sbjct: 378 QDLSHPCHAAQRAHVESTLRSLAFSVAGGDSSASQLPPIINVYNKCDLVTPQAQ-TAAGG 436
Query: 417 LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTS 476
LISA +GL L +++ IL TGR+ + +RV SGG E WL K+ AV N + D+ +
Sbjct: 437 HLISARAQSGLEPLLMDIEEQILNVTGRRKLQVRVPSGGPEMAWLYKNAAVVNTKADEQN 496
Query: 477 AEHLLLDVVMTDVIMNKFKHEFI 499
+E +L+ VV++ +++FK +F
Sbjct: 497 SEKILMRVVISQRTLDQFKRQFC 519
>gi|340709437|ref|XP_003393316.1| PREDICTED: putative GTP-binding protein 6-like [Bombus terrestris]
Length = 484
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 193/471 (40%), Positives = 282/471 (59%), Gaps = 12/471 (2%)
Query: 40 NTTRDFMLAESKALVKFSDNSQDDLEESDEFKTIRDEAQTGALGT---DHQVFVVQPFIK 96
NT R F + + + + EE E K + LGT ++VFV+QP++K
Sbjct: 20 NTRRKFNILNVIHQYEHASDITFKYEEKQEEKNTYAQVSQDYLGTAVGGNKVFVIQPYVK 79
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR 156
WG KRNTT LAE+KAL++++ W VV ++ LL+ +K G G LE LK +R
Sbjct: 80 WGINQKRNTTPQLQLAEAKALINTLTDWSVVGEKLVPLLTLNKNKLVGTGALETLKEDIR 139
Query: 157 GDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAEL 216
V+ +F+S ++LK Q LQ +P++DRY IVI IF+ HAKT EA+LQ+A+AEL
Sbjct: 140 KCPHVSCIFISTNLLKFVQIAELQKALHLPIYDRYSIVIHIFREHAKTPEAKLQVALAEL 199
Query: 217 PYLWTRYRTIEDATNMNITK-GFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQK 275
PY+ + + D TN +I + + + + +L RE++LK +L +LK R+ ++ +
Sbjct: 200 PYIKQK---MMDLTNYHIGRISYTEKIKNMLHTREKRLKNSLQRLKEHRQRIKQHRVNYG 256
Query: 276 FPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGF 335
FP++A++GYTN GKT+LIKALT+D SL P ++LFATLD T H G+LPN L++LY+DTIGF
Sbjct: 257 FPSIAIIGYTNAGKTSLIKALTNDASLQPEDKLFATLDTTVHGGLLPNMLKVLYIDTIGF 316
Query: 336 ISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV 395
I ++P L+EPF VTLEDA ADI+IHV D S+PD Q QHV +T++ + E K+ +
Sbjct: 317 IQDVPEILIEPFIVTLEDATSADILIHVFDASHPDVRAQIQHVQKTIEPMVDENKV---I 373
Query: 396 LVVGNKVDAVPPG--ERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRS 453
+ V NK D + E V E ISAT+ TG+ L+ K+Q I +RV +
Sbjct: 374 INVANKCDVIEKDVIENVMPENTFAISATKSTGIDLLRLKIQKEITNIPNLIKKRIRVGN 433
Query: 454 GGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSRKR 504
G +E WL K V + D + ++L++DV MT I KFK F +R +
Sbjct: 434 GSTEASWLYKEATVLSAEPDPNNPQYLIMDVFMTLPIFYKFKRVFNLNRSK 484
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 2 ESDEFKTIRDEAQTGALGT---DHQVFVIQPFIKWGKKMKRNTTRDFMLAESKALV 54
E E K + LGT ++VFVIQP++KWG KRNTT LAE+KAL+
Sbjct: 46 EKQEEKNTYAQVSQDYLGTAVGGNKVFVIQPYVKWGINQKRNTTPQLQLAEAKALI 101
>gi|195395684|ref|XP_002056466.1| GJ10964 [Drosophila virilis]
gi|194143175|gb|EDW59578.1| GJ10964 [Drosophila virilis]
Length = 525
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 192/450 (42%), Positives = 271/450 (60%), Gaps = 25/450 (5%)
Query: 75 DEAQTGAL------GTDHQVFVVQPFIKWGKK--MKRNTTRDFMLAESKALVSSIQGWRV 126
DE GA+ T VF++QP++KW K N T D LAE+ AL+ S+ W+V
Sbjct: 76 DEVAGGAMRISRDVATAQHVFILQPYVKWSAKRTTPDNVTPDDQLAEATALIHSLPNWQV 135
Query: 127 VDSTIISLLSFDKKSFFGKGNLELLKR---QVRGDARVTAVFVSVDVLKLHQQKMLQDLF 183
S + L S ++K+ FG G L LK+ +R + +VT +FVS L Q++ L+ F
Sbjct: 136 ARSLKVPLESLERKTLFGSGKLTELKQLMTDLRQERQVTCLFVSKGTLSFAQKQFLETEF 195
Query: 184 QVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKR 243
Q+PV DRY +VIQI + HA + EARLQ+A+AELPY+W + D ++
Sbjct: 196 QLPVLDRYSVVIQILRLHATSAEARLQVAMAELPYIWALAKDASVTQTRRQGYSLSDLQK 255
Query: 244 MVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLV 303
+L RE+KL+ L+ ++ QR+++R K+++Q +P AVVGYTN GKT+LIKALT D L
Sbjct: 256 EILRTRERKLRAELDGVRRQRQLLRQKRKQQNYPVAAVVGYTNAGKTSLIKALTVQDKLQ 315
Query: 304 PRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHV 363
PRNQLFATLDVT H G LP +++Y+DT+GF+S++PT L E F TLEDAMLADIIIHV
Sbjct: 316 PRNQLFATLDVTAHAGNLPCNQQLIYMDTVGFMSDLPTGLFECFVATLEDAMLADIIIHV 375
Query: 364 VDVSNPDYLQQKQHVDETLQHLEL-------EEKILEHVLVVGNKVDAVPPGERVTEEYD 416
D+S+P + Q+ HV+ TL+ L L ++ V NK D + P ++
Sbjct: 376 QDLSHPCHSAQRAHVESTLRSLAFSIAGGDPSAGQLPPIINVYNKCDLLTPKAQLAAVAQ 435
Query: 417 L-------LISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSN 469
L LISA TGL L + V+ IL ATGR+ + +RV SGG E WL K+ AV +
Sbjct: 436 LQNTAVGHLISARAQTGLEPLLKDVEKQILAATGRRKLQVRVPSGGPEMAWLYKNAAVVD 495
Query: 470 IREDDTSAEHLLLDVVMTDVIMNKFKHEFI 499
R D+ +AE +L+ VV++ + +FK EF
Sbjct: 496 TRADEQNAEKILMRVVISQRTLEQFKREFC 525
>gi|158298227|ref|XP_318421.4| AGAP003969-PA [Anopheles gambiae str. PEST]
gi|157014422|gb|EAA13619.5| AGAP003969-PA [Anopheles gambiae str. PEST]
Length = 543
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 192/463 (41%), Positives = 292/463 (63%), Gaps = 21/463 (4%)
Query: 59 NSQDDLEESDEFKTIRDEAQ--TGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKA 116
N + +L E E+ T+ A T + V ++QP+IKWG + K T D +L E++A
Sbjct: 82 NQRTELIEDREYDTVASSAMHVTKQILNVQHVVIIQPYIKWGPR-KNPTKPDLLLQEAEA 140
Query: 117 LVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLK-----RQVRGDARVTAVFVSVDVL 171
LV S+ W + S + + + DK+ FG G LE LK RQ G +T VF+S L
Sbjct: 141 LVRSLPRWNIELSMKVPVETLDKRQLFGTGKLEELKGIIQARQETGTP-LTCVFISKGTL 199
Query: 172 KLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN 231
Q++ L+ +F++PV DRY +V+QI + HA + EA+LQ+A+AELPY+W++ + E +T
Sbjct: 200 TYGQKQTLEQVFRLPVMDRYSVVVQILRLHAVSMEAKLQVALAELPYIWSQVKDQEGSTK 259
Query: 232 MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTT 291
DS+R +L RE+KL+ L ++ RE++RN+++++ FP VAVVGYTN GKT+
Sbjct: 260 GGGRIFLSDSQRQMLQLRERKLRNELATIRTHRELLRNRRRQKNFPVVAVVGYTNAGKTS 319
Query: 292 LIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTL 351
LIKALT++ SL PR+QLFATLDVT H G+LP +L +LY+DT+GF+++IPT L+E F TL
Sbjct: 320 LIKALTEEQSLQPRDQLFATLDVTAHAGLLPCKLEVLYMDTVGFMADIPTGLIECFVATL 379
Query: 352 EDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEK------ILEHVLVVGNKVDAV 405
EDAMLAD+I+HV D+++ + +Q+ HV+ TL L + E ++ VGNK+D V
Sbjct: 380 EDAMLADVIVHVQDMAHENCAEQRAHVERTLGKLMQQGNNGAGALTPERIINVGNKIDLV 439
Query: 406 --PPGERVTEEYDL----LISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQ 459
P R+ + + LIS+ G+ +L +V+ +L+ATGR+ + +RV GG E
Sbjct: 440 ADPADLRMDSDGEQQRLHLISSRTLVGVHELLLEVERRVLRATGRQRMVIRVPMGGQELA 499
Query: 460 WLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSR 502
WL K+ AV+ D +AE LL+ VV+T+ + +F+H FI +R
Sbjct: 500 WLYKNAAVTESAADPNNAERLLVSVVITEAKLQQFRHLFIRNR 542
>gi|383861896|ref|XP_003706420.1| PREDICTED: putative GTP-binding protein 6-like [Megachile
rotundata]
Length = 480
Score = 350 bits (898), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 182/428 (42%), Positives = 277/428 (64%), Gaps = 11/428 (2%)
Query: 75 DEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISL 134
E G+L ++VFV+QP+IKWG +RNTT + L E+ L++++ W+V+D ++ L
Sbjct: 58 SEHCLGSLIFGNRVFVIQPYIKWGPDKRRNTTPELQLEEAVTLINTLPNWKVIDKKLVPL 117
Query: 135 LSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIV 194
L+ +K G G L+ LK+ ++ +A VT++F+S ++LK Q LQ FQ+PV+DRY IV
Sbjct: 118 LTLQRKQLVGSGTLKTLKQAIQ-NANVTSIFISTNLLKFVQIFELQKAFQLPVYDRYSIV 176
Query: 195 IQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKRM-VLMEREQKL 253
I IF+ HAKT EA+LQ+A+AE+PY+ + + D + + + LD KR +L +RE+KL
Sbjct: 177 IHIFRQHAKTPEAKLQVALAEIPYIKQK---MIDFSTYRMGRVNLDEKRKKILQDREKKL 233
Query: 254 KKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLD 313
K AL KLK R M ++++ FP++AVVGYTN GKT+LIKALT D+ L P N+LFATLD
Sbjct: 234 KNALEKLKQHRHMTKSQRNSYGFPSIAVVGYTNAGKTSLIKALTGDEHLQPENKLFATLD 293
Query: 314 VTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQ 373
T H+G L N+L++LY+DTIGFI ++P TL+EPF+VTL+DA+ ADI++HV D+S+PD
Sbjct: 294 TTVHQGFLSNKLKVLYIDTIGFIQDVPETLIEPFRVTLQDAIDADILVHVFDISHPDVKA 353
Query: 374 QKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG---ERVTEEYDLLISATRGTGLAQL 430
Q Q V +T++ + E K+ V+ V NK D + G + + E L +SA + G+ L
Sbjct: 354 QIQEVQKTIEPMIEENKV---VINVANKCDIIEEGTFDKDILPENTLTVSAVKSIGIGVL 410
Query: 431 KEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVI 490
+ K++ I++A RV+ G L K TAV + D + ++++LDVV+T +
Sbjct: 411 QSKLEKEIMRAANLLKKKFRVKLGSPAASLLYKETAVMSSEPDPENMQYVILDVVVTTTV 470
Query: 491 MNKFKHEF 498
K + F
Sbjct: 471 FYKLQRMF 478
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 11 DEAQTGALGTDHQVFVIQPFIKWGKKMKRNTTRDFMLAESKALV 54
E G+L ++VFVIQP+IKWG +RNTT + L E+ L+
Sbjct: 58 SEHCLGSLIFGNRVFVIQPYIKWGPDKRRNTTPELQLEEAVTLI 101
>gi|332021008|gb|EGI61401.1| Putative GTP-binding protein 6 [Acromyrmex echinatior]
Length = 479
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 190/448 (42%), Positives = 290/448 (64%), Gaps = 14/448 (3%)
Query: 53 LVKFSDNSQDDLEESDE-----FKTIRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTR 107
+ + + NS++ L E DE + I A+G H+ F++QP+IKWG+ KRNT+
Sbjct: 36 ICRLNHNSEEYLSEEDEKKQNAYVKITSRYLGIAVG-GHRTFILQPYIKWGRDKKRNTSP 94
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
+ +AE+ AL++++ W VV + LL+ +K G G +E LK+ +R TA+F+S
Sbjct: 95 ELQMAEAVALINTLPNWCVVGTKYSPLLTLQRKHLLGTGAIENLKKDLRQCPNPTAIFIS 154
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIE 227
+ LK Q L+ +F +PV+DRY IVI IF+ HAKT EARLQ+A+AE+PY+ R + E
Sbjct: 155 TNQLKFVQISELEKIFGLPVYDRYSIVIHIFREHAKTAEARLQVALAEIPYI--RKKIFE 212
Query: 228 DATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
+ + +++L +E+KLK L KL+ R +R+ +++ FPTVAVVGYTN
Sbjct: 213 TCITRSGAINVTEETKLLLDSKEKKLKNELKKLQQHRRTIRSHRKKHGFPTVAVVGYTNA 272
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GKT+LIK LTDD+SL PR++LFATLD T H+G+LPNRL+ILY+DTIGFI ++P TL+EPF
Sbjct: 273 GKTSLIKVLTDDNSLQPRDKLFATLDTTAHQGILPNRLKILYMDTIGFIQDVPETLIEPF 332
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP 407
VTLEDAM+AD+++H+ DVS+PD Q QHV +T++ + I++ V NK D V
Sbjct: 333 IVTLEDAMIADVVVHIYDVSHPDMKAQYQHVQQTIKPMLDARPIID----VANKCDLV-Q 387
Query: 408 GERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
+ + ++ + +SA TG+ L+ K+Q+++L +TG +I +RV+ G S WL K T V
Sbjct: 388 SDCIPKDV-IAVSAKDLTGIDLLRLKIQEVLLASTGLLSIRVRVKVGSSAASWLYKMTTV 446
Query: 468 SNIREDDTSAEHLLLDVVMTDVIMNKFK 495
+N D ++L+++V+ T V + KF+
Sbjct: 447 TNAESDPNDTQYLIMEVIATAVDIQKFR 474
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 22 HQVFVIQPFIKWGKKMKRNTTRDFMLAESKALVKFSDN 59
H+ F++QP+IKWG+ KRNT+ + +AE+ AL+ N
Sbjct: 73 HRTFILQPYIKWGRDKKRNTSPELQMAEAVALINTLPN 110
>gi|312374110|gb|EFR21748.1| hypothetical protein AND_16452 [Anopheles darlingi]
Length = 561
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 189/440 (42%), Positives = 285/440 (64%), Gaps = 25/440 (5%)
Query: 88 VFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGN 147
V ++QP+IKWG + K T + +L E++ALV S+ W V S + + + +K+ FG G
Sbjct: 122 VVIIQPYIKWGPR-KSVTKPELLLQEAEALVRSLPRWNTVLSLKVPVETLEKRQLFGSGK 180
Query: 148 LELLKRQVRGD----ARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAK 203
LE LK +R A ++ VF+S L Q++ L+ F++PV DRY +V+QI + HA
Sbjct: 181 LEELKAVIRAQQEAGAMLSCVFISKGTLTYTQKQTLEQEFRLPVMDRYSVVVQILRLHAV 240
Query: 204 TREARLQIAIAELPYLWTRYRTIEDATNMNITKG--FL-DSKRMVLMEREQKLKKALNKL 260
+ EA+LQ+A+AELPY+W++ + E + I G FL DS+R +L RE+KL+ L+ +
Sbjct: 241 SMEAKLQVALAELPYIWSQVKGQEAGSKGPIGGGRVFLSDSQRQMLQLRERKLRNELSAI 300
Query: 261 KGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGM 320
+ RE++RN+++++ FP VAVVGYTN GKT+LIKALT + SL PR+QLFATLDVT H G+
Sbjct: 301 RSHRELLRNRRRQKNFPVVAVVGYTNAGKTSLIKALTQEQSLQPRDQLFATLDVTAHAGL 360
Query: 321 LPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDE 380
LP +L++LY+DT+GF+S+IPT L+E F TLEDAMLAD+I+HV D+++ + +Q+ HV+
Sbjct: 361 LPCKLQVLYMDTVGFMSDIPTGLIECFVATLEDAMLADVIVHVQDMAHEAHAEQRAHVER 420
Query: 381 TLQHLELE--EKIL--EHVLVVGNKVDAVP-PGE--RVTEEYDL----------LISATR 423
TL L ++ L + ++ VGNK+D VP P R E D LIS+
Sbjct: 421 TLGSLMRTGGDRTLTPDRIINVGNKIDLVPDPNAILRTQENEDTSEDNGDARLHLISSQT 480
Query: 424 GTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLD 483
G+ +L +V+ +L+ TGR+ +T+RV GG E WL K+ AV+ D +AE LL++
Sbjct: 481 LHGVHELLLEVERRVLRVTGRQRLTIRVPMGGPELAWLYKNAAVTETAADPVNAERLLVN 540
Query: 484 VVMTDVIMNKFKHEFISSRK 503
V+++ +F+H FI SRK
Sbjct: 541 AVISEGKFQQFRHLFIGSRK 560
>gi|170042136|ref|XP_001848793.1| GTP-binding protein hflx [Culex quinquefasciatus]
gi|167865661|gb|EDS29044.1| GTP-binding protein hflx [Culex quinquefasciatus]
Length = 515
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 188/470 (40%), Positives = 298/470 (63%), Gaps = 28/470 (5%)
Query: 54 VKFSDNSQDDLEESD--------EFKTIRDEAQ--TGALGTDHQVFVVQPFIKWGKKMKR 103
K ++ S++D E S E+ + + A L + VF++QP++KWG K K
Sbjct: 55 AKAAEGSEEDGEGSSQEVDLDDAEYDAVANSAMHVQKRLQNEQHVFIIQPYVKWGPK-KV 113
Query: 104 NTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR----GDA 159
+ + L E++ALV S+ W + S + L S +K+ FG G L LK +R
Sbjct: 114 ASDPEHQLQEAEALVRSLPRWTIEHSLKVPLESLEKRQLFGTGKLGELKSTLRNLQSAGK 173
Query: 160 RVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYL 219
VT VF+S L Q+++L+ F++PV DRY +VIQI + HA + EA+LQ+A+AE+PY+
Sbjct: 174 SVTCVFISKGTLTFSQKQLLEQHFKLPVMDRYSVVIQILRLHAISTEAKLQVAMAEIPYI 233
Query: 220 WTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
W++ + + + ++ +S++ +L RE+KLK L ++ RE++RNK++++ +P V
Sbjct: 234 WSQLKDQDGKGRVFLS----ESQKQMLRLRERKLKTQLTAIRSHRELLRNKRKQKAYPIV 289
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GKT+LIKALT+++SL P+NQLFATLDVT H G+LP++L +L++DT+GF+++I
Sbjct: 290 AVVGYTNAGKTSLIKALTEEESLQPKNQLFATLDVTAHAGLLPSKLEVLFMDTVGFMADI 349
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL----ELEEKILEHV 395
PT L+E F TLEDAM AD+IIHV D+S+P++ +QK HV+ TL L + ++
Sbjct: 350 PTGLIECFVATLEDAMFADLIIHVQDISHPNHAEQKNHVESTLAALLKSTGTNNENPPNI 409
Query: 396 LVVGNKVDAVPPGERVTEEYDL-LISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG 454
+ VGNKVD +P T +L L+S+ G+ L K++ IL++TGR+ I +RV G
Sbjct: 410 INVGNKVDLLP---NSTPPSNLHLVSSKTLAGVNDLLAKIEQNILESTGRQRIIIRVPMG 466
Query: 455 GSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSRKR 504
G+E WL K+ AV+ D ++ +L+ V+TD + +F+H+F+ +RKR
Sbjct: 467 GAEVAWLYKNAAVTETGADPDDSQRMLVSAVITDAKLAQFRHQFV-NRKR 515
>gi|260797445|ref|XP_002593713.1| hypothetical protein BRAFLDRAFT_64000 [Branchiostoma floridae]
gi|229278941|gb|EEN49724.1| hypothetical protein BRAFLDRAFT_64000 [Branchiostoma floridae]
Length = 570
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 181/427 (42%), Positives = 280/427 (65%), Gaps = 17/427 (3%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
H+V VVQP +KWG K + TT + MLAES ALV ++ W+VV + ++S + DKK+ FGK
Sbjct: 140 HKVVVVQPNVKWGAKKQHLTTGELMLAESVALVETLPHWKVVHTVLMSTKTPDKKTVFGK 199
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
GN + L +++ VTAVF+SV+ L QQK +++ + V VFDRY +V+QIFK HA+T+
Sbjct: 200 GNFQALTEKIKAMKDVTAVFLSVEALTGRQQKQMEEAWGVSVFDRYTVVLQIFKDHARTK 259
Query: 206 EARLQIAIAELPYLWTRYRTIEDATNMN-----------ITKGFLDSKRMVLMEREQKLK 254
EAR+QIA+AE+PYL + R E+ N++ + F + ++ VL ++E +K
Sbjct: 260 EARMQIALAEIPYL--KMRISEEVANLDQQRGGVRTRGGGGETFRELRKRVLKQKETAIK 317
Query: 255 KALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDV 314
KAL +LK +R+++R+ + +++ P V+VVGYTN GKTTLIKALT ++ + P++QLFATLDV
Sbjct: 318 KALVRLKKKRDLLRSGRTKKEIPVVSVVGYTNSGKTTLIKALTGEERIQPQDQLFATLDV 377
Query: 315 TTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQ 374
T H G LP+++ LYVDT+GF+S +P L+ F TLED L+D+I+H+ DVS+PD + Q
Sbjct: 378 TAHAGQLPSKMTALYVDTVGFLSQLPHHLIASFNATLEDVRLSDLIVHIRDVSHPDTVNQ 437
Query: 375 KQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD---LLISATRGTGLAQLK 431
K +V + L +L+L + +L++++ NK+D + V EE D + ISA +GTGL +L+
Sbjct: 438 KHNVLQVLSNLKLPQHLLDNMIEANNKIDLLDGESSVPEEDDSTVINISALKGTGLDRLR 497
Query: 432 EKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIM 491
+ V++ + +AT T+R+ G + L K V ++ + AEHL +DV++
Sbjct: 498 DVVEERLFEATDTVKTTLRIPMAGQQLSQLYKTATVQGVQVTE-DAEHLDVDVIVGKAAF 556
Query: 492 NKFKHEF 498
KF H F
Sbjct: 557 AKFMHAF 563
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 22 HQVFVIQPFIKWGKKMKRNTTRDFMLAESKALVK 55
H+V V+QP +KWG K + TT + MLAES ALV+
Sbjct: 140 HKVVVVQPNVKWGAKKQHLTTGELMLAESVALVE 173
>gi|304435905|ref|NP_036359.2| putative GTP-binding protein 6 [Homo sapiens]
gi|308153596|sp|O43824.3|GTPB6_HUMAN RecName: Full=Putative GTP-binding protein 6; AltName:
Full=Pseudoautosomal GTP-binding protein-like
Length = 516
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/422 (41%), Positives = 275/422 (65%), Gaps = 14/422 (3%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+V +V P +KWG + T ++ +AE+ ALV ++ GW VV + ++S + D+K FGKG
Sbjct: 97 RVCLVHPDVKWGPGKSQMTRAEWQVAEATALVHTLDGWSVVQTMVVSTKTPDRKLIFGKG 156
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
N E L ++RG VT VF++V+ + +K L+ + V VFDR+ +V+ IF+ +A+T+E
Sbjct: 157 NFEHLTEKIRGSPDVTCVFLNVERMAAPTKKELEAAWGVEVFDRFTVVLHIFRCNARTKE 216
Query: 207 ARLQIAIAELPYLWTR--------YRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALN 258
ARLQ+A+AE+P + YR + M + F+ ++ +L E+E K++KAL+
Sbjct: 217 ARLQVALAEMPLHRSNLKRDVAHLYRGVGSRYIMGSGESFMQLQQRLLREKEAKIRKALD 276
Query: 259 KLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHE 318
+L+ +R ++R ++ R++FP ++VVGYTNCGKTTLIKALT D ++ PR+QLFATLDVT H
Sbjct: 277 RLRKKRHLLRRQRTRREFPVISVVGYTNCGKTTLIKALTGDAAIQPRDQLFATLDVTAHA 336
Query: 319 GMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHV 378
G LP+R+ +LYVDTIGF+S +P L+E F TLED +D+I+HV DVS+P+ QK V
Sbjct: 337 GTLPSRMTVLYVDTIGFLSQLPHGLIESFSATLEDVAHSDLILHVRDVSHPEAELQKCSV 396
Query: 379 DETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMI 438
TL+ L+L +L+ ++ V NKVD V PG TE + +SA RG GL +LK ++ +
Sbjct: 397 LSTLRGLQLPAPLLDSMVEVHNKVDLV-PGYSPTEPNVVPVSALRGHGLQELKAELDAAV 455
Query: 439 LKATGRKNITMRVRSGGSEYQWLMKHTAVS--NIREDDTSAEHLLLDVVMTDVIMNKFKH 496
LKATGR+ +T+RVR G++ WL K V ++ +D +A+ + V++++ KF+
Sbjct: 456 LKATGRQILTLRVRLAGAQLSWLYKEATVQEVDVIPEDGAAD---VRVIISNSAYGKFRK 512
Query: 497 EF 498
F
Sbjct: 513 LF 514
>gi|346467419|gb|AEO33554.1| hypothetical protein [Amblyomma maculatum]
Length = 521
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/420 (41%), Positives = 267/420 (63%), Gaps = 6/420 (1%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
H V VVQP IK G++++ TT LAE+ AL+ ++ GW+ + + +K F
Sbjct: 98 HDVLVVQPRIKKGRRVRTETTTALQLAEAVALLETLPGWKAAGKLTLKTDNDMRKLIFKA 157
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
GNLE ++ + + TAVF++VD+L Q LQ+ F +P++DRY +V+ IF+ HA+TR
Sbjct: 158 GNLERIQDSAK-EKSATAVFINVDILTGVQHVALQEFFGLPIYDRYTVVLNIFRHHARTR 216
Query: 206 EARLQIAIAELPYLWTRYRTIEDATNMNIT---KGFLDSKRMVLMEREQKLKKALNKLKG 262
EA+LQIA+AE+PY R + T N++ + + + ++ L RE L++ L++LKG
Sbjct: 217 EAKLQIALAEIPYYRARIWHLHKGTGRNMSGTGQTYYEQQKQQLASREAALRRQLSELKG 276
Query: 263 QREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLP 322
+R ++R K+++ ++PTVAVVGYTN GKT LI+ LT+D L PR+QLFATLDVT H G L
Sbjct: 277 ERSLLRKKRRQLEYPTVAVVGYTNAGKTALIQQLTNDSRLQPRDQLFATLDVTAHAGRLR 336
Query: 323 NRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETL 382
+LY+DT+GFIS+IPTTL+ F TLED +LAD+I+HV D+S+PD Q+++V ETL
Sbjct: 337 AMKSVLYMDTVGFISDIPTTLVASFASTLEDVVLADVIVHVRDLSHPDSDAQRKNVLETL 396
Query: 383 QHLELEEKILEHVLVVGNKVDAVPPGERVTEEY--DLLISATRGTGLAQLKEKVQDMILK 440
+ + + ++ ++ VGNK+D +P +EE L S G GL +L+E ++ +++
Sbjct: 397 ELIGVPPRLANSIIEVGNKIDLLPLPPASSEECVPKYLTSCVDGRGLPELREIIERKLIE 456
Query: 441 ATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFIS 500
TGR + +RV +GG EY WL K + + D+ + +DVV+T + KF+H F S
Sbjct: 457 NTGRTVVRLRVLTGGPEYAWLYKEGSFLSCTADEHDCNYSFMDVVLTPAAVAKFRHHFGS 516
>gi|195451962|ref|XP_002073152.1| GK13306 [Drosophila willistoni]
gi|194169237|gb|EDW84138.1| GK13306 [Drosophila willistoni]
Length = 523
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 187/447 (41%), Positives = 275/447 (61%), Gaps = 28/447 (6%)
Query: 75 DEAQTGAL------GTDHQVFVVQPFIKWGKKMKRNTTRDF----MLAESKALVSSIQGW 124
DE GA+ T QV ++QP++KW K RN +D LAE+ AL+ S+ W
Sbjct: 83 DEVAGGAMRITRNVATSQQVLILQPYVKWSAK--RNLPQDVKPEDQLAEATALIRSLPNW 140
Query: 125 RVVDSTIISLLSFDKKSFFGKGNLELLK---RQVRGDARVTAVFVSVDVLKLHQQKMLQD 181
+V + + L + +++ FG G ++ LK +R + +T +FVS L Q++ L++
Sbjct: 141 QVAKALKVPLENLKRRTLFGSGKIDELKTLIADLRQEMSLTCLFVSKGTLSFAQKRYLEE 200
Query: 182 LFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITK---GF 238
F +PV DRY +VIQI + HA + EARLQ+A+AELPY+W++ + DA+ I +
Sbjct: 201 EFHLPVMDRYSVVIQILRLHATSAEARLQVAMAELPYIWSQAK---DASASQIRRQGYAL 257
Query: 239 LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALT- 297
D ++ +L RE+KL+ L +++ R+++R K+++Q +P ++VVGYTN GKT+LIKALT
Sbjct: 258 SDLQKEILKTRERKLRAELEQVRRHRQLLRQKRKQQNYPIISVVGYTNAGKTSLIKALTA 317
Query: 298 DDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLA 357
+ D+L PRNQLFATLDVT H G LP L+++Y+DT+GF+S++PT L E F TLEDAMLA
Sbjct: 318 ESDALQPRNQLFATLDVTAHAGQLPCNLQVIYMDTVGFMSDLPTGLFECFVATLEDAMLA 377
Query: 358 DIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEH---VLVVGNKVDAVPPGERVTEE 414
DIIIHV D+S+P + Q+ HV+ TL+ L EH ++ V NK D VP + EE
Sbjct: 378 DIIIHVQDISHPCHNAQRNHVESTLRSLAFNVGG-EHQPPIINVFNKCDLVPNADDHAEE 436
Query: 415 YDL--LISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIRE 472
ISA GL L ++ IL TGR+ I MRV SGG E WL K+ AV + +
Sbjct: 437 STAHHRISARSQIGLDPLLLDIEAQILSVTGRRKIQMRVPSGGPEMAWLYKNAAVIDTQA 496
Query: 473 DDTSAEHLLLDVVMTDVIMNKFKHEFI 499
D + + LL+ VV++ + +FK EF
Sbjct: 497 DLENPQRLLMQVVISQRTLEQFKREFC 523
>gi|395840553|ref|XP_003793119.1| PREDICTED: putative GTP-binding protein 6 [Otolemur garnettii]
Length = 518
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/393 (43%), Positives = 259/393 (65%), Gaps = 10/393 (2%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+VF+V P +KWG + TT + +AE+ ALV ++ GW VV + ++S + KK FGKG
Sbjct: 97 RVFLVHPDVKWGPGKPQMTTATWQVAEATALVHTLDGWSVVQTMVMSTKTPTKKLIFGKG 156
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
N E L +RG +T+VF++V+ + +K L+ + + VFDR+ IV+ IF+ HA+TRE
Sbjct: 157 NFEQLTETIRGCPEITSVFLNVERMAAPTKKELEAAWGLEVFDRFTIVLHIFRCHARTRE 216
Query: 207 ARLQIAIAELPYLWTRYR---TIEDATN------MNITKGFLDSKRMVLMEREQKLKKAL 257
ARLQ+A+AE+P L + R +D M + F+ ++ VL E+E K+++AL
Sbjct: 217 ARLQVALAEIPLLRSNLRNNIAHQDHQGGGSRYIMGSGESFMQVQQRVLREKEAKIRRAL 276
Query: 258 NKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTH 317
+L+G+R ++ ++ R++FP V+VVGYTNCGKTTLIKALT D ++ PR+QLFATLD+T H
Sbjct: 277 ERLRGKRRLLCRQRTRREFPVVSVVGYTNCGKTTLIKALTGDVAVQPRDQLFATLDITAH 336
Query: 318 EGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQH 377
G LP+ + +LY+DTIGF+S +P L+E F TLED +D+I+HV DVS+P+ +QK
Sbjct: 337 AGSLPSHMTVLYMDTIGFLSELPHGLIESFSATLEDVAHSDLILHVRDVSHPETERQKAS 396
Query: 378 VDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDM 437
V +L+ L L +L+ ++ V NKVD V PG TE + + ISA G+GL QLK ++D
Sbjct: 397 VLSSLRSLNLPGPLLDTMVEVHNKVDLV-PGYSPTEPHAVAISALLGSGLQQLKADLEDA 455
Query: 438 ILKATGRKNITMRVRSGGSEYQWLMKHTAVSNI 470
+L+ATGR+ +T+RV G++ WL + V +
Sbjct: 456 VLRATGRQLLTLRVHLAGAQLSWLHREATVQQV 488
>gi|321473393|gb|EFX84360.1| hypothetical protein DAPPUDRAFT_46890 [Daphnia pulex]
Length = 439
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 185/429 (43%), Positives = 270/429 (62%), Gaps = 23/429 (5%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
HQV ++QPF+KWG K TT D ML E+KALV S+ W+ VD+ + + S +KK+ FG
Sbjct: 9 HQVAILQPFVKWGPKKNLLTTPDLMLEEAKALVDSLPNWKCVDAIKVPVESLEKKTIFGS 68
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
G E L++ + + ++AVFVS +VL+ Q++ L F VPVFDRY +V+QIFK A+TR
Sbjct: 69 GQFESLQKNIVANPNISAVFVSTNVLRGIQRRELMMTFGVPVFDRYSVVLQIFKDRARTR 128
Query: 206 EARLQIAIAELPYLWTRYRTIEDATNMNI--------TKG-----FLDSKRMVLMEREQK 252
EA+LQ+A AE+PYL + ++ T N+ +KG F DS+ +L RE K
Sbjct: 129 EAKLQVAFAEIPYLRSSLVGLQKGTKNNLPVENTSRGSKGGSGESFCDSQLHLLDRREIK 188
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
+KK L KL +R +++ ++++++FP VA+VGYTNCGKTTLIK+LT D + PR+ LFATL
Sbjct: 189 IKKELEKLAKKRTLLKCERKKREFPVVAIVGYTNCGKTTLIKSLTGDSKITPRDALFATL 248
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
DVT H LP L +L VDT+GFISNIP L+ F TL DA+ AD+++H+ D+S+PD
Sbjct: 249 DVTVHGMKLPCNLTVLLVDTVGFISNIPVNLIAAFNSTLRDAIDADVLVHLQDISHPDVE 308
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKE 432
Q V +TL+ L ++ + V+ V NK+D + E + + DL ISA GTGL + +
Sbjct: 309 NQVATVKDTLEQLNIDST--KTVIQVANKIDKM-SSEELDDYSDLHISAKDGTGLEEFVD 365
Query: 433 KVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV---SNIREDDTSAEHLLLDVVMTDV 489
+Q +L+ T R+ + + V SGG+EY WL K V SN ++ ++L LDV++T
Sbjct: 366 LIQTKVLEITNRRYLRLMVLSGGTEYSWLHKEATVVKYSNTKD----PQYLALDVLVTPS 421
Query: 490 IMNKFKHEF 498
K + F
Sbjct: 422 TFGKLRFNF 430
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 22 HQVFVIQPFIKWGKKMKRNTTRDFMLAESKALV 54
HQV ++QPF+KWG K TT D ML E+KALV
Sbjct: 9 HQVAILQPFVKWGPKKNLLTTPDLMLEEAKALV 41
>gi|194741652|ref|XP_001953303.1| GF17695 [Drosophila ananassae]
gi|190626362|gb|EDV41886.1| GF17695 [Drosophila ananassae]
Length = 523
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 199/492 (40%), Positives = 290/492 (58%), Gaps = 27/492 (5%)
Query: 34 GKKMKRNTTRDFMLAESKALVKFSDNSQDDLEESDEFKTIR-------DEAQTGAL---- 82
G K RN + F A+ +A + D+ +++ S + +R DE GA+
Sbjct: 33 GVKGIRNR-KSFFEAQMQAGQRADDHDEEETLLSGDLTDVRFLDDRAYDEVAGGAMRITR 91
Query: 83 --GTDHQVFVVQPFIKWGKKMKRNTT---RDFMLAESKALVSSIQGWRVVDSTIISLLSF 137
T QV ++QP++KW K + T D LAE+ ALV S+ W+V + + L S
Sbjct: 92 DIATSQQVLILQPYVKWAAKRQPTLTDVRPDDQLAEASALVHSLPNWQVAKALKVPLESL 151
Query: 138 DKKSFFGKGNLELLKRQV---RGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIV 194
+KK+ FG G L LK V R + +T +FVS L Q++ L+ F++PV DRY +V
Sbjct: 152 EKKTLFGSGKLAELKALVTDLRQERHLTCLFVSKGTLSFAQKRFLEAEFRLPVMDRYSVV 211
Query: 195 IQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLK 254
IQI + HA + EARLQ+A+AELPY+W + + D ++ +L RE+KL+
Sbjct: 212 IQILRLHATSAEARLQVAMAELPYIWAQAKDASVTQTRRQGYALTDLQKEILRTRERKLR 271
Query: 255 KALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDV 314
L++++ QR+++R K+++Q +P VAVVG TN GKT+LIKALT +D+L PRNQLFATLDV
Sbjct: 272 AELDRVRRQRQLLRQKRKQQNYPIVAVVGCTNAGKTSLIKALTVEDALQPRNQLFATLDV 331
Query: 315 TTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQ 374
T H G LP L ++Y+DT+GF+S++PT L E F TLEDAMLAD+IIHV D+S+P ++ Q
Sbjct: 332 TAHAGCLPCNLEVIYMDTVGFMSDLPTGLFECFVATLEDAMLADVIIHVQDLSHPCHVAQ 391
Query: 375 KQHVDETLQHLELE-------EKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGL 427
+ HV+ TL+ L L ++ V NK D +P + T + D ISA GL
Sbjct: 392 RNHVEATLRSLAFNMSGGDSTASQLPPIINVYNKCDLIPMKGQKTSKTDHHISARTQMGL 451
Query: 428 AQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMT 487
L V+ IL ATGRK + MRV +GG E WL K+ AV D+ + E L++ VV+T
Sbjct: 452 DTLLVDVEQQILVATGRKKLKMRVPNGGQEMAWLYKNAAVVETMADEKNPEWLMMQVVIT 511
Query: 488 DVIMNKFKHEFI 499
+++FK +F
Sbjct: 512 QRTLDQFKRQFC 523
>gi|195112208|ref|XP_002000666.1| GI22404 [Drosophila mojavensis]
gi|193917260|gb|EDW16127.1| GI22404 [Drosophila mojavensis]
Length = 522
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 192/476 (40%), Positives = 282/476 (59%), Gaps = 37/476 (7%)
Query: 61 QDDLEESDEFKTIR------------DEAQTGAL------GTDHQVFVVQPFIKWGKK-- 100
Q L E +E T+ +E GA+ T VF++QP++KW K
Sbjct: 47 QPGLHEQNELATVNAGDMRFLDDRAYEEVAGGAMRINRDVATAQHVFILQPYVKWSAKRT 106
Query: 101 MKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKR---QVRG 157
+ T D LAE+ AL+ S+ W+V S + L S ++K+ FG G + +K Q+R
Sbjct: 107 TPVDVTPDDQLAEATALIHSLPNWKVARSLKVPLESLERKTLFGSGKIAEIKELLAQLRN 166
Query: 158 DARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELP 217
+ +V +VFVS L Q++ L+D F++PV DRY +VIQI + HA + EARLQ+A+AELP
Sbjct: 167 ERQVNSVFVSKGTLSFAQRQFLEDEFKLPVLDRYSVVIQILRLHATSAEARLQVAMAELP 226
Query: 218 YLWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
Y+W++ + D ++ +L RE+KL+ L+ ++ QR ++R K+++ P
Sbjct: 227 YIWSQAKDASVTQTRRQGYSLTDQQKEILRTRERKLRAELDDVRRQRRLLRKKRKQLNCP 286
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
T AVVGYTN GKT+LIKALT +D++ PRNQLFATLDVT H G LP L+I+Y+DT+GF+S
Sbjct: 287 TAAVVGYTNAGKTSLIKALTMEDTMQPRNQLFATLDVTAHAGYLPCNLQIIYMDTVGFMS 346
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKI------ 391
++PT L E F TLEDAMLADIIIHV D+S+P + Q+ HV+ TL+ L
Sbjct: 347 DLPTGLFECFVATLEDAMLADIIIHVQDLSHPCHAAQRAHVEATLRSLAFSVSQGNSNVG 406
Query: 392 -LEHVLVVGNKVDAVPPGERVT---EEYDL----LISATRGTGLAQLKEKVQDMILKATG 443
L ++ V NK D + P +V+ E+ D L SA GL L + V+ IL TG
Sbjct: 407 ELPPIINVFNKCDLLKPKAQVSVLAEQTDTGMCHLTSARTHAGLQTLLKDVEQQILDVTG 466
Query: 444 RKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFI 499
R+ + +RV SGG E WL K+ AV + + D+ +AE +L+ VV++ +++F EF
Sbjct: 467 RRKLQVRVPSGGPEMAWLYKNAAVVDTKADEQNAEKILMRVVISQCTLDQFMREFC 522
>gi|322797366|gb|EFZ19478.1| hypothetical protein SINV_09654 [Solenopsis invicta]
Length = 483
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 187/436 (42%), Positives = 290/436 (66%), Gaps = 10/436 (2%)
Query: 60 SQDDLEESDEFKTIRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVS 119
S +D + D + I + A+G H+ F++QP+IKWG+ KRNT+ + +AE+ AL++
Sbjct: 48 SAEDEGQQDAYSEIASRYLSIAVG-GHRTFILQPYIKWGRDKKRNTSPELQMAEAVALIN 106
Query: 120 SIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKML 179
++ W VV + LL+ KK G G ++ LK ++ + TAVF+S ++LK Q L
Sbjct: 107 TLPNWCVVGTKYAPLLTLQKKQLLGTGAMKDLKTELH-KCQPTAVFISTNLLKFVQIIEL 165
Query: 180 QDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFL 239
+ +F +PV+DRY IVI IF+ HAKT EA+LQ+A+AE+PY+ R + +E + +
Sbjct: 166 EKIFNLPVYDRYSIVIHIFREHAKTAEAKLQVALAEIPYI--RKKILETSITRSGAVNMT 223
Query: 240 DSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDD 299
+ +++L +E+KLK L KLK R+ +R++++++ FPTVAVVGYTN GKT+LIKALTDD
Sbjct: 224 EEAKLLLDGKEKKLKNELKKLKQHRQTIRSQRKKRGFPTVAVVGYTNAGKTSLIKALTDD 283
Query: 300 DSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADI 359
SL P+++LFATLD T H+G+LPN+L++LY+DTIGFI ++P TL+EPF VTLEDA++AD+
Sbjct: 284 SSLQPKDKLFATLDTTAHQGILPNKLKVLYMDTIGFIQDVPETLIEPFIVTLEDAIIADV 343
Query: 360 IIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLI 419
I+H+ DVS+PD Q QH+ ET++ + + I++ V NK D V + + ++ + +
Sbjct: 344 IVHIYDVSHPDMKAQYQHIQETIKPMLDDRPIID----VANKCDLV-ESDYIPKD-AIAV 397
Query: 420 SATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEH 479
SA TG+ L+ K+Q+++L TG +I RV+SG WL K T V N D A++
Sbjct: 398 SAKNLTGIDLLRFKIQEVLLATTGLLSIRARVKSGSPAASWLYKMTTVINAESDPNDAQY 457
Query: 480 LLLDVVMTDVIMNKFK 495
L+++V+ T V + KFK
Sbjct: 458 LIMEVLTTSVDIQKFK 473
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Query: 2 ESDEFKTIRDEAQTGALGT-----------DHQVFVIQPFIKWGKKMKRNTTRDFMLAES 50
+S+E+ + DE Q A H+ F++QP+IKWG+ KRNT+ + +AE+
Sbjct: 42 DSEEYISAEDEGQQDAYSEIASRYLSIAVGGHRTFILQPYIKWGRDKKRNTSPELQMAEA 101
Query: 51 KALVKFSDN 59
AL+ N
Sbjct: 102 VALINTLPN 110
>gi|348530156|ref|XP_003452577.1| PREDICTED: putative GTP-binding protein 6-like [Oreochromis
niloticus]
Length = 522
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/460 (38%), Positives = 291/460 (63%), Gaps = 21/460 (4%)
Query: 56 FSDNSQDD--LEESDEFKTIRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAE 113
F++ +D+ LE+S+ + + + G H+VF++ P +KWG + + TT + M+AE
Sbjct: 68 FNEEGEDEDFLEDSEVEELFQQQIPAGIGEGQHRVFIIHPDVKWGSRKQHLTTAELMMAE 127
Query: 114 SKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKL 173
++ LV++++ W VVD I+S + +KK FGKGN + L ++R A +TAVFV+V+ L
Sbjct: 128 AEGLVNTLENWTVVDKMILSTKTPEKKRIFGKGNFQTLTERIRQTAGITAVFVNVERLSP 187
Query: 174 HQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN 233
++ ++++ V VFDRY +V+ IF+ +A+T+EA+LQI++AE+P L +R + + N++
Sbjct: 188 LSEREFEEVWGVKVFDRYSVVLHIFRCNARTKEAKLQISLAEIPLLRSRLKN--EMANLD 245
Query: 234 ITKG-----------FLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
G + ++ +L ERE K++ AL KL+ +R ++R++++ ++FP V+V+
Sbjct: 246 QQGGGSRYIGGSGETLYEIQQRLLKEREIKIRLALEKLRKKRHLLRSQRKHREFPVVSVL 305
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTNCGKTTLIKALT D L PRNQLFATLDVT H G LP+ + +LYVDTIGF+S +P
Sbjct: 306 GYTNCGKTTLIKALTGDTGLQPRNQLFATLDVTVHAGQLPSHMTVLYVDTIGFLSQLPHQ 365
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L++ F TLED +D++IHV D+S+P+ QK +V L++L++ ++++ ++ V NK
Sbjct: 366 LIDSFSATLEDIKHSDLLIHVRDISHPETANQKVNVLNVLKNLQIPDRLMNSMIEVHNKT 425
Query: 403 DAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLM 462
D + E E L ISA G GL QLKE V++ ILKATG++ + + V + WL
Sbjct: 426 DLITNYESA-EPAALPISALEGRGLEQLKEAVEEEILKATGKQILDLTVNLSSPQLSWLY 484
Query: 463 KHTAVSNIR--EDDTSAEHLLLDVVMTDVIMNKFKHEFIS 500
K V +++ D+ SA ++ V++ ++K F S
Sbjct: 485 KEATVQDVQVNADEGSA---VVKVIIGTAAHGRYKKLFGS 521
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 22 HQVFVIQPFIKWGKKMKRNTTRDFMLAESKALVKFSDN 59
H+VF+I P +KWG + + TT + M+AE++ LV +N
Sbjct: 100 HRVFIIHPDVKWGSRKQHLTTAELMMAEAEGLVNTLEN 137
>gi|297470580|ref|XP_002684046.1| PREDICTED: putative GTP-binding protein 6 [Bos taurus]
gi|296491719|tpg|DAA33752.1| TPA: pseudoautosomal GTP-binding protein-like protein-like [Bos
taurus]
Length = 633
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/424 (41%), Positives = 269/424 (63%), Gaps = 15/424 (3%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
+V +V P +KWG + T ++ +AE++ALV ++ GW VVD+ ++ + DKK FG+
Sbjct: 212 QRVCLVHPEVKWGPGKTQGTRAEWQVAEARALVCTLDGWLVVDTMVVRTTTPDKKLIFGR 271
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
G LE L ++RG +T+VF++V+ L +K L+ ++VPVFDR+ +V+ IF+ +A+T+
Sbjct: 272 GTLEQLTERIRGSPEITSVFLNVERLATPTKKDLEAAWRVPVFDRFTVVLHIFRCNARTK 331
Query: 206 EARLQIAIAELPYLWTRY---------RTIEDATNMNITKGFLDSKRMVLMEREQKLKKA 256
EARLQ+A+AELP L + R M + FL ++ +L +RE K++KA
Sbjct: 332 EARLQVALAELPLLRSHVKSNVAHLGGRGRSSRYTMGSGESFLQLQQRLLRDREAKIQKA 391
Query: 257 LNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTT 316
L +L+ +R ++ +++R++FP V+VVGYTNCGKTTLIKALT D ++ PRNQLFATLD+T
Sbjct: 392 LERLRCKRRLLGQQRRRKEFPVVSVVGYTNCGKTTLIKALTGDAAIQPRNQLFATLDITA 451
Query: 317 HEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQ 376
H G LP+ L +LY+DTIGF+S +P +L+E F TL+D +D+I+HV DVS+P+ QK
Sbjct: 452 HAGRLPSALTVLYMDTIGFLSQLPHSLVESFSATLQDVAHSDLIVHVRDVSHPETELQKA 511
Query: 377 HVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQD 436
V L L L + +LE ++ V NKVD V PG E L +SA G GL +L +V+D
Sbjct: 512 SVLSALWGLGLPDALLESMVEVHNKVDLV-PGYTPVEPDVLAVSALLGLGLDELMARVED 570
Query: 437 MILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLD--VVMTDVIMNKF 494
+L+ATGR+ +T+RVR G + WL + V + D E D V+++D +F
Sbjct: 571 AVLRATGRRTLTLRVRLAGPQLSWLHQEATVQAV---DVIPEAGAADVKVIISDSAYGRF 627
Query: 495 KHEF 498
+ F
Sbjct: 628 RKLF 631
>gi|291231737|ref|XP_002735823.1| PREDICTED: pseudoautosomal GTP-binding protein-like protein-like
[Saccoglossus kowalevskii]
Length = 535
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 186/431 (43%), Positives = 281/431 (65%), Gaps = 21/431 (4%)
Query: 84 TDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFF 143
+ H+VFV+QP +KWG + + TT D E+ L+ +++ W VVDS +SL K F
Sbjct: 103 SGHKVFVIQPEVKWGPRKQHLTTGDLQRQEAVTLIETLENWSVVDSLTVSLKKPGHKHVF 162
Query: 144 GKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAK 203
GKGN +L ++ + VTAVF+SV++L Q K+L++ + V V+DRY IV+ IFK HA
Sbjct: 163 GKGNFAMLTNLIKSMSSVTAVFMSVEMLTGLQHKLLEEAWGVHVYDRYTIVLNIFKEHAV 222
Query: 204 TREARLQIAIAELPYLWTRYRTIEDATNMNITKG-----------FLDSKRMVLMEREQK 252
T+EA+LQIA+AE+PYL +R R + +NM+ G L+ +R +L ERE K
Sbjct: 223 TKEAKLQIALAEIPYLRSRLRGM--VSNMDQQSGAQQYIGGGGETLLEVQRRMLDEREMK 280
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
+KK L+KLK +RE++R +++++FPT++VVGYTN GKTTLIK+LT D L P+++LFATL
Sbjct: 281 IKKRLSKLKKRRELLRTIRKKKQFPTISVVGYTNSGKTTLIKSLTGDLDLCPQDKLFATL 340
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D+T+H G L NR+ ++YVDT+GFIS +P L++ F TLED ML+D+IIH+ DVS+PD +
Sbjct: 341 DITSHVGQLTNRMNVIYVDTVGFISALPHNLIDAFSATLEDVMLSDLIIHIRDVSHPDTV 400
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP-----PGERVTEEYDLLISATRGTGL 427
QK +V LQ + + +++ +++ V NK+D + P R T +++SA GTGL
Sbjct: 401 AQKDNVLRVLQEMGVPDELTNNMIEVCNKIDVLEKQTTNPHTRQTA--GIMVSALNGTGL 458
Query: 428 AQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMT 487
LK++++ +LK T + T+R+ G + WL K T V+N + S EHL ++V+MT
Sbjct: 459 QLLKKEIEKSLLKVTDIVSKTLRIPMNGPQLSWLYKTTTVTNTNASEDS-EHLHVNVIMT 517
Query: 488 DVIMNKFKHEF 498
KFK +F
Sbjct: 518 KSTYAKFKSKF 528
>gi|358421459|ref|XP_003584968.1| PREDICTED: putative GTP-binding protein 6 [Bos taurus]
Length = 523
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 177/424 (41%), Positives = 269/424 (63%), Gaps = 15/424 (3%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
+V +V P +KWG + T ++ +AE++ALV ++ GW VVD+ ++ + DKK FG+
Sbjct: 102 QRVCLVHPEVKWGPGKTQGTRAEWQVAEARALVCTLDGWLVVDTMVVRTTTPDKKLIFGR 161
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
G LE L ++RG +T+VF++V+ L +K L+ ++VPVFDR+ +V+ IF+ +A+T+
Sbjct: 162 GTLEQLTERIRGSPEITSVFLNVERLATPTKKDLEAAWRVPVFDRFTVVLHIFRCNARTK 221
Query: 206 EARLQIAIAELPYLWTRY---------RTIEDATNMNITKGFLDSKRMVLMEREQKLKKA 256
EARLQ+A+AELP L + R M + FL ++ +L +RE K++KA
Sbjct: 222 EARLQVALAELPLLRSHVKSNVAHLGGRGRSSRYTMGSGESFLQLQQRLLRDREAKIQKA 281
Query: 257 LNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTT 316
L +L+ +R ++ +++R++FP V+VVGYTNCGKTTLIKALT D ++ PRNQLFATLD+T
Sbjct: 282 LERLRCKRRLLGQQRRRKEFPVVSVVGYTNCGKTTLIKALTGDAAIQPRNQLFATLDITA 341
Query: 317 HEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQ 376
H G LP+ L +LY+DTIGF+S +P +L+E F TL+D +D+I+HV DVS+P+ QK
Sbjct: 342 HAGRLPSALTVLYMDTIGFLSQLPHSLVESFSATLQDVAHSDLIVHVRDVSHPETELQKA 401
Query: 377 HVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQD 436
V L L L + +LE ++ V NKVD V PG E L +SA G GL +L +V+D
Sbjct: 402 SVLSALWGLGLPDALLESMVEVHNKVDLV-PGYTPVEPDVLAVSALLGLGLDELMARVED 460
Query: 437 MILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLD--VVMTDVIMNKF 494
+L+ATGR+ +T+RVR G + WL + V + D E D V+++D +F
Sbjct: 461 AVLRATGRRTLTLRVRLAGPQLSWLHQEATVQAV---DVIPEAGAADVKVIISDSAYGRF 517
Query: 495 KHEF 498
+ F
Sbjct: 518 RKLF 521
>gi|194908539|ref|XP_001981789.1| GG11408 [Drosophila erecta]
gi|190656427|gb|EDV53659.1| GG11408 [Drosophila erecta]
Length = 525
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 183/445 (41%), Positives = 273/445 (61%), Gaps = 21/445 (4%)
Query: 75 DEAQTGAL------GTDHQVFVVQPFIKWGKKMKRNTTRDF----MLAESKALVSSIQGW 124
DE GA+ + QV ++QP++KW K ++NT D LAE+ AL+ S+ W
Sbjct: 81 DEVAGGAMRITRDIASSQQVLILQPYVKWAAK-RQNTPVDVRPEDQLAEASALIHSLPNW 139
Query: 125 RVVDSTIISLLSFDKKSFFGKGNLELLKR---QVRGDARVTAVFVSVDVLKLHQQKMLQD 181
+V + + L + +KK+ FG G L LK ++R + ++T +FVS L Q++ L+
Sbjct: 140 QVARALKVPLENLEKKTLFGSGKLVELKELVAELRQERQLTCLFVSKGTLSFAQKRFLEA 199
Query: 182 LFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDS 241
F +PV DRY +VIQI + HA + EA+LQ+A+AELPY+W + + D
Sbjct: 200 EFHLPVMDRYSVVIQILRLHATSAEAKLQVAMAELPYIWAQAKDASVTQTRRQGYALTDL 259
Query: 242 KRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDS 301
++ +L RE+KL+ L++++ QR+++R K+++Q +P VAVVGYTN GKT+LIKALT +D+
Sbjct: 260 QKEILRTRERKLRAELDRVRRQRQLLRQKRKQQNYPIVAVVGYTNAGKTSLIKALTVEDA 319
Query: 302 LVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIII 361
L PRNQLFATLDVT H G LP L ++Y+DT+GF+S++PT L E F TLEDAMLAD+I+
Sbjct: 320 LQPRNQLFATLDVTAHAGCLPCNLEVIYMDTVGFMSDLPTGLFECFVATLEDAMLADVIV 379
Query: 362 HVVDVSNPDYLQQKQHVDETLQHLELE-------EKILEHVLVVGNKVDAVPPGERVTEE 414
HV D+S+P + Q+ HV+ TL+ L L ++ V NK D V + + E
Sbjct: 380 HVQDLSHPCHAAQRSHVEATLRSLAFNVAGGDSTASQLPPIINVYNKCDLVSSEAQPSSE 439
Query: 415 YDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDD 474
ISA TGL L + ++ IL ATGR+ + MRV SGG E WL K+ AV + D
Sbjct: 440 SVHHISARTQTGLEPLLDDIEQQILTATGRRKLQMRVPSGGPEMAWLYKNAAVVDTTADA 499
Query: 475 TSAEHLLLDVVMTDVIMNKFKHEFI 499
+ E L++ VV++ +++FK +F
Sbjct: 500 ENPERLMMHVVISQRTLDQFKRQFC 524
>gi|301615114|ref|XP_002937028.1| PREDICTED: putative GTP-binding protein 6-like [Xenopus (Silurana)
tropicalis]
Length = 530
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 176/428 (41%), Positives = 278/428 (64%), Gaps = 21/428 (4%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
H+VF+V P +KWG K + ++ D +AE+ AL+ S+ W VV++ I+S S D K FGK
Sbjct: 109 HRVFLVHPDVKWGAKKQHLSSADLQVAEAVALIHSLPNWSVVNTLIMSTKSPDSKLIFGK 168
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
GN + L ++G ++TAVF++V+ L +K +++ + V VFDRY +V+ IF+ +A T+
Sbjct: 169 GNFQTLTDVIKGHPQITAVFLNVERLSSLTEKEMEEAWGVKVFDRYTVVLNIFRFNAHTK 228
Query: 206 EARLQIAIAELPYLWTRYRTIEDATNMNITKG-----------FLDSKRMVLMEREQKLK 254
EA+LQIA+AELP L R + +M+ G FL+ ++ +L ERE K+K
Sbjct: 229 EAKLQIALAELPLL--RSNLKNETAHMDQQGGGSRYIMGSGETFLEVQQRLLKEREIKIK 286
Query: 255 KALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDV 314
AL K+K +R ++R +++R++FP ++V+GYTN GKTTLIKALT D+ L PR+QLFATLDV
Sbjct: 287 NALEKVKKKRNLLRTQRRRREFPIISVLGYTNSGKTTLIKALTGDEGLQPRDQLFATLDV 346
Query: 315 TTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQ 374
T+H G+LP R+ ++YVDTIGF+S +P L+E F TLED + +D++IHV D+S+P+ L+Q
Sbjct: 347 TSHAGLLPCRMPVIYVDTIGFLSQLPHNLIESFSATLEDVVHSDLLIHVRDISHPETLKQ 406
Query: 375 KQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKV 434
K V L++L L +++L+ ++ V NK+D V E + L +SA G GL LK++V
Sbjct: 407 KASVLSVLKNLRLPQQLLDTMIEVHNKIDLVDMPENIDASV-LSVSALLGHGLEDLKQQV 465
Query: 435 QDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIR---EDDTSAEHLLLDVVMTDVIM 491
+ ++K+TGR +T+ V+ + WL K ++V ++ ED T+ + V++T+
Sbjct: 466 ETAVMKSTGRNVLTINVKLESPQLSWLYKESSVQEVKVLPEDGTAR----VRVIITNSAY 521
Query: 492 NKFKHEFI 499
K+K F
Sbjct: 522 GKYKKLFC 529
>gi|213513263|ref|NP_001133555.1| GTP-binding protein 6 [Salmo salar]
gi|209154476|gb|ACI33470.1| GTP-binding protein 6 [Salmo salar]
Length = 565
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/427 (39%), Positives = 278/427 (65%), Gaps = 19/427 (4%)
Query: 85 DHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFG 144
DH++F+V P +KWG + + TT + M+ E+ LV+++Q W V+D I+S + +KK FG
Sbjct: 139 DHRIFIVHPDVKWGSRKQYLTTANLMMEEAVGLVNTLQNWSVIDKVILSTKTPEKKMIFG 198
Query: 145 KGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKT 204
KGN + L ++R +TAVFV+V+ L +K ++ + V VFDRY +V+ IF+ +A+T
Sbjct: 199 KGNFQTLTERIRRTPGITAVFVNVERLSPASEKEFEEAWGVKVFDRYSVVLHIFRCNART 258
Query: 205 REARLQIAIAELPYLWTRYRTIEDATNMNITKG-----------FLDSKRMVLMEREQKL 253
+EA+LQ+++AE+P L +R R + N++ G ++ ++ VL ER+ K+
Sbjct: 259 KEAKLQVSLAEIPLLRSRLRN--EVANLDQQGGGSRYIMGSGETLMEVQQRVLQERKLKI 316
Query: 254 KKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLD 313
AL L+ +R ++R++++ + FP ++V+GYTNCGKTTLIKALT D +L PR+QLFATLD
Sbjct: 317 CSALEHLRRKRHLLRSQRKHRDFPIISVMGYTNCGKTTLIKALTGDAALQPRDQLFATLD 376
Query: 314 VTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQ 373
VT H G LP+ + +LYVDTIGF+S +P L++ F TLED +D+I+HV D+S+P+ +
Sbjct: 377 VTVHAGTLPSHMSVLYVDTIGFLSQLPHQLIDSFSATLEDVTHSDLIVHVRDISHPETVN 436
Query: 374 QKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEK 433
QK++V L++L++ +++L ++ V NK+D V E +E +L ISA RG GL +LK
Sbjct: 437 QKENVLNVLRNLQIPDRLLSSIVEVHNKIDLVDSYEP-SEPNNLPISALRGQGLEELKIV 495
Query: 434 VQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVS--NIREDDTSAEHLLLDVVMTDVIM 491
V++ I+++TG++ +T+ V S+ WL K V ++ D+ SA ++ V+++
Sbjct: 496 VEEAIVRSTGKQVLTLPVDLSSSQLSWLYKEATVQEVDVNPDEGSA---VVKVIISAAAY 552
Query: 492 NKFKHEF 498
+++ F
Sbjct: 553 GRYRKMF 559
>gi|410920954|ref|XP_003973948.1| PREDICTED: putative GTP-binding protein 6-like [Takifugu rubripes]
Length = 514
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/448 (39%), Positives = 284/448 (63%), Gaps = 18/448 (4%)
Query: 62 DDLEESDEFKTIRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSI 121
DD E + F+ +D A+ G H++F+V P +KWG + + TT + MLAE+ LV+++
Sbjct: 71 DDSEVEELFQQ-QDIAEVGQ--GQHRLFIVHPDVKWGSRKQHLTTAELMLAEAVGLVNTL 127
Query: 122 QGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQD 181
W VVDS I+S + +KK FGKGN + L ++R A +TAVFV+V+ L K L++
Sbjct: 128 DNWTVVDSIILSTKTPEKKRIFGKGNFQSLTEKIRQTAGITAVFVNVERLSPLSVKELKE 187
Query: 182 LFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKG---- 237
+ V VFDRY +V+ IF+ +A+T+EA+LQI++AE+P L +R R D N++ G
Sbjct: 188 AWGVNVFDRYSVVLHIFRCNAQTKEAKLQISLAEIPLLRSRLRN--DVANLDQQGGRSKY 245
Query: 238 -------FLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKT 290
L+ ++ +L ERE K++ AL KL+ +R ++R++++ ++FP V+V+GYTNCGKT
Sbjct: 246 IGGSGETLLEVQQRLLRERELKIRSALEKLRRKRHLLRSQRKHKEFPVVSVLGYTNCGKT 305
Query: 291 TLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVT 350
TLIK+LT D L P+NQLFATLDVT H G LPN + +LYVDTIGF+S +P L++ F T
Sbjct: 306 TLIKSLTGDSGLQPKNQLFATLDVTVHAGQLPNHMTVLYVDTIGFLSQLPHQLIDSFSAT 365
Query: 351 LEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER 410
LED +D+++HV D+S+P+ + QK +V L++L++ E++L ++ V NK+D + +
Sbjct: 366 LEDIKHSDLLVHVRDISHPETVNQKVNVLNVLKNLQIPERLLGSMIEVHNKIDLI-DNYQ 424
Query: 411 VTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNI 470
+ + L ISA G GL +LK V+ I+ +TG+ + +RV + WL K V ++
Sbjct: 425 FMDPHVLPISALDGRGLDELKMAVEAEIIASTGKHILDLRVDLSSPQLSWLYKEATVQDV 484
Query: 471 REDDTSAEHLLLDVVMTDVIMNKFKHEF 498
E D + ++ VV++ ++K F
Sbjct: 485 -EVDANDGSAIVKVVISTAAYGRYKKLF 511
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 2 ESDEFKTIRDEAQTGALGTDHQVFVIQPFIKWGKKMKRNTTRDFMLAESKALVKFSDN 59
E +E +D A+ G H++F++ P +KWG + + TT + MLAE+ LV DN
Sbjct: 74 EVEELFQQQDIAEVGQ--GQHRLFIVHPDVKWGSRKQHLTTAELMLAEAVGLVNTLDN 129
>gi|189233856|ref|XP_972507.2| PREDICTED: similar to GTP-binding protein hflx [Tribolium
castaneum]
Length = 471
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 177/418 (42%), Positives = 269/418 (64%), Gaps = 11/418 (2%)
Query: 84 TDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFF 143
+ +++QP+IKWG + + T L E+KALV+++ W + DS + L SFDKK+ F
Sbjct: 60 SGRNCYIIQPYIKWGPQKLQGITPIEQLDEAKALVNTLPSWNIQDSISVPLESFDKKTLF 119
Query: 144 GKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAK 203
G+L+ L++ +R ++ + AVFV++ LK Q L+ F VP+ DRY +V+ I K H
Sbjct: 120 KSGSLDKLRQIIRKNSTINAVFVNLGTLKKAQIVSLEREFGVPILDRYKVVMYILKLHVV 179
Query: 204 TREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQ 263
++ A+LQ+A+AEL YL + T +A N K + +++ REQKLK A+ +L+ +
Sbjct: 180 SKHAKLQVALAELYYL--QRSTFHEA---NFGKAEREKVKLMFQTREQKLKNAIKELRTE 234
Query: 264 REMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPN 323
R ++RNK+Q+ FP VAVVGYTN GKT+LIKALT ++ L P+NQLFATLDVT H G+LP+
Sbjct: 235 RALLRNKRQKIDFPVVAVVGYTNAGKTSLIKALTGEERLRPKNQLFATLDVTLHAGLLPS 294
Query: 324 RLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQ 383
+++LYVDT+GFIS+IPT L+E F TLEDA+LAD+I+HV D+S+ + +++HV TLQ
Sbjct: 295 GMKVLYVDTVGFISDIPTNLIECFVATLEDAVLADVILHVEDISSSFFEFKRKHVLATLQ 354
Query: 384 HLELEE---KILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
L +L V+ VGNK D VP + T+ L +S+ TGL L+ ++ IL+
Sbjct: 355 DLATNAGTGDVLNKVISVGNKCDLVP---KETDFGILKVSSKDDTGLDVLRMTLEKAILE 411
Query: 441 ATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
T R I +RV GG +WL K++ V + D+ + E ++ +V++T + +FKH F
Sbjct: 412 NTNRAKIKIRVPVGGDAIRWLYKNSTVISESPDEKNVEFVIANVIITQGKLEQFKHNF 469
>gi|147902718|ref|NP_001087175.1| putative GTP-binding protein 6 [Xenopus laevis]
gi|82182198|sp|Q6DCC6.1|GTPB6_XENLA RecName: Full=Putative GTP-binding protein 6
gi|50418397|gb|AAH78122.1| MGC83645 protein [Xenopus laevis]
Length = 527
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/428 (40%), Positives = 277/428 (64%), Gaps = 21/428 (4%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
H+VF+V P +KWG K + +T D +AE+ ALV S+ W VV++ I+S S D K FGK
Sbjct: 106 HRVFIVHPDVKWGAKKDQLSTADLQVAEAAALVHSLPNWSVVNTLIMSTKSPDSKLIFGK 165
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
GN + L ++G ++TAVF++V+ L +K +++ + V VFDRY +V+ IF+ +A T+
Sbjct: 166 GNFQTLTDVIKGHPQITAVFLNVERLSSLTEKEMEEAWGVKVFDRYTVVLNIFRFNAHTK 225
Query: 206 EARLQIAIAELPYLWTRYRTIEDATNMNITKG-----------FLDSKRMVLMEREQKLK 254
EA+LQIA+AELP L R + +M+ G FL+ ++ +L ERE K+K
Sbjct: 226 EAKLQIALAELPLL--RSSLKNETAHMDQQGGGSRYIMGSGETFLEVQQRLLKEREIKIK 283
Query: 255 KALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDV 314
AL K+K +R ++R +++R++FP ++++GYTN GKTTLIKALT D+ L PR+QLFATLDV
Sbjct: 284 YALEKVKKKRNLLRTQRRRREFPIISILGYTNSGKTTLIKALTGDEGLQPRDQLFATLDV 343
Query: 315 TTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQ 374
T+H G+LP + ++YVDTIGF+S +P L+E F TLED + +D++IHV D+S+P+ +Q
Sbjct: 344 TSHAGLLPCHMPVIYVDTIGFLSQLPHNLIESFSATLEDVVHSDLLIHVRDISHPETTKQ 403
Query: 375 KQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKV 434
K V L++L L +++L+ ++ V NK+D + E TE+ L +SA G GL LK++V
Sbjct: 404 KASVLSVLKNLGLPQQLLDTMIEVQNKIDLIDMPEN-TEDSVLSVSALHGHGLEDLKQQV 462
Query: 435 QDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIR---EDDTSAEHLLLDVVMTDVIM 491
+ ++K+TGR +T++V + WL K +V ++ ED T+ + V++T+
Sbjct: 463 ETAVMKSTGRNVVTIKVNLESPQLSWLYKEASVQEVKVLPEDGTAR----VRVIITNSAY 518
Query: 492 NKFKHEFI 499
K++ F
Sbjct: 519 GKYRKLFC 526
>gi|198453782|ref|XP_001359336.2| GA18671 [Drosophila pseudoobscura pseudoobscura]
gi|198132510|gb|EAL28481.2| GA18671 [Drosophila pseudoobscura pseudoobscura]
Length = 525
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 184/447 (41%), Positives = 273/447 (61%), Gaps = 27/447 (6%)
Query: 75 DEAQTGAL------GTDHQVFVVQPFIKWGKKMKRNTTRDF----MLAESKALVSSIQGW 124
DE GA+ + QV ++QP++KW K ++NT D LAE+ AL+ S+ W
Sbjct: 84 DEVAGGAMRISRDIASAQQVLILQPYVKWSAK-RQNTPSDVRPEDQLAEASALIHSLPNW 142
Query: 125 RVVDSTIISLLSFDKKSFFGKGNLELLKRQV---RGDARVTAVFVSVDVLKLHQQKMLQD 181
+V + + L S ++K+ FG G + LK + R + +T +FVS L Q++ L+
Sbjct: 143 QVAKALKVPLESLERKTLFGSGKMVELKALIADLRQEKHLTCLFVSKGTLSFAQKRFLEA 202
Query: 182 LFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDS 241
F++PV DRY +VIQI + HA T EARLQ+A+AELPY+W++ + D
Sbjct: 203 EFRLPVMDRYSVVIQILRLHATTAEARLQVAMAELPYIWSQAKDASVTQTRRQGYSLTDL 262
Query: 242 KRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDS 301
++ +L RE+KL+ L++++ QR+++R K+++Q +P VAVVGYTN GKT+LIKALT +D+
Sbjct: 263 QKEILRTRERKLRAELDRVRRQRQLLRQKRKQQNYPIVAVVGYTNAGKTSLIKALTVEDA 322
Query: 302 LVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIII 361
L PRNQLFATLDVT H G LP L+++Y+DT+GF+S++PT L E F TLEDAMLAD+I+
Sbjct: 323 LQPRNQLFATLDVTAHAGQLPCNLQVIYMDTVGFMSDLPTGLFECFVATLEDAMLADVIV 382
Query: 362 HVVDVSNPDYLQQKQHVDETLQHLELE-------EKILEHVLVVGNKVDAV--PPGERVT 412
HV D+S+P + Q+ HV+ TL+ L L ++ V NK D V P +
Sbjct: 383 HVQDLSHPCHAAQRSHVESTLRSLAFNVSGGDPATSQLPPIINVYNKCDLVSQPSSDAAV 442
Query: 413 EEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIRE 472
ISA TGL L +++ IL ATGR+ + MRV SGG E WL K+ AV +
Sbjct: 443 HH----ISARAQTGLEPLLADIEEQILAATGRRKLQMRVPSGGPEMAWLYKNAAVVDTVA 498
Query: 473 DDTSAEHLLLDVVMTDVIMNKFKHEFI 499
D+ L++ VV++ +++FK EF+
Sbjct: 499 DEAYPNRLMMHVVISQRTLDQFKREFL 525
>gi|195504324|ref|XP_002099030.1| GE23604 [Drosophila yakuba]
gi|194185131|gb|EDW98742.1| GE23604 [Drosophila yakuba]
Length = 528
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 195/495 (39%), Positives = 292/495 (58%), Gaps = 31/495 (6%)
Query: 34 GKKMKRNTTRDFMLAESKALVKFSDNSQDDLEE--SDEFKTIR-------DEAQTGAL-- 82
G K RN + F A+ +A + ++ DLE S + +R DE GA+
Sbjct: 35 GVKGIRNR-KSFFEAQIQAGQRSEEDEDADLERTASSDLADMRFLDDRAYDEVAGGAMRI 93
Query: 83 ----GTDHQVFVVQPFIKWGKKMKRNTTRDF----MLAESKALVSSIQGWRVVDSTIISL 134
+ QV ++QP++KW K ++NT D LAE+ AL+ S+ W+V + + L
Sbjct: 94 TRDIASSQQVLILQPYVKWAAK-RQNTPVDVRPEDQLAEASALIHSLPNWQVARALKVPL 152
Query: 135 LSFDKKSFFGKGNLELLKR---QVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRY 191
S +KK+ FG G L LK ++R + ++T +FVS L Q++ L+ F++PV DRY
Sbjct: 153 ESLEKKTLFGSGKLVELKELVAELRQERQLTCLFVSKGTLSFAQKRFLEAEFRLPVMDRY 212
Query: 192 MIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKRMVLMEREQ 251
+VIQI + HA + EA+LQ+A+AELPY+W + + D ++ +L RE+
Sbjct: 213 SVVIQILRLHATSAEAKLQVAMAELPYIWAQAKDASVTQTRRQGYALTDLQKEILRTRER 272
Query: 252 KLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFAT 311
KL+ L++++ QR+++R K+++Q +P VAVVGYTN GKT+LIKALT +D+L PRNQLFAT
Sbjct: 273 KLRAELDRVRRQRQLLRQKRKQQNYPIVAVVGYTNAGKTSLIKALTVEDALQPRNQLFAT 332
Query: 312 LDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDY 371
LDVT H G LP L ++Y+DT+GF+S++PT L E F TLEDAMLAD+I+HV D+S+P +
Sbjct: 333 LDVTAHAGCLPCNLEVIYMDTVGFMSDLPTGLFECFVATLEDAMLADVIVHVQDLSHPCH 392
Query: 372 LQQKQHVDETLQHLELE-------EKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRG 424
Q+ HV+ TL+ L L ++ V NK D V + + + ISA
Sbjct: 393 AAQRSHVEATLRSLAFNVASGDSTTSQLPPIINVYNKCDLVSLEAQPSADPVHHISARTQ 452
Query: 425 TGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDV 484
TGL L ++ IL ATGR+ + MRV SGG E WL K+ AV D + E L++ V
Sbjct: 453 TGLEPLLVDIEQQILSATGRRKLQMRVPSGGPEMAWLYKNAAVVETTADAENPERLMMHV 512
Query: 485 VMTDVIMNKFKHEFI 499
V++ +++FK +F
Sbjct: 513 VISQRTLDQFKRQFC 527
>gi|32880121|gb|AAP88891.1| Pseudoautosomal GTP-binding protein-like [synthetic construct]
gi|60653937|gb|AAX29661.1| pseudoautosomal GTP-binding protein-like [synthetic construct]
Length = 404
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 171/404 (42%), Positives = 265/404 (65%), Gaps = 14/404 (3%)
Query: 105 TTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAV 164
T ++ +AE+ ALV ++ GW VV + ++S + D+K FGKGN E L ++RG VT V
Sbjct: 2 TRAEWQVAEATALVHTLDGWSVVQTMVVSTKTPDRKLIFGKGNFEHLTEKIRGSPDVTCV 61
Query: 165 FVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTR-- 222
F++V+ + +K L+ + V VFDR+ +V+ IF+ +A+T+EARLQ+A+AE+P +
Sbjct: 62 FLNVERMAAPTKKELEAAWGVEVFDRFTVVLHIFRCNARTKEARLQVALAEMPLHRSNLK 121
Query: 223 ------YRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
YR + M + F+ ++ +L E+E K++KAL++L+ +R ++R ++ R++F
Sbjct: 122 RDVAHLYRGVGSRYIMGSGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREF 181
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P ++VVGYTNCGKTTLIKALT D ++ PR+QLFATLDVT H G LP+R+ +LYVDTIGF+
Sbjct: 182 PVISVVGYTNCGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFL 241
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
S +P L+E F TLED +D+I+HV DVS+P+ QK V TL+ L+L +L+ ++
Sbjct: 242 SQLPHGLIESFSATLEDVAHSDLILHVRDVSHPEAELQKCSVLSTLRGLQLPAPLLDSMV 301
Query: 397 VVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGS 456
V NKVD V PG TE + +SA RG GL +LK ++ +LKATGR+ +T+RVR G+
Sbjct: 302 EVHNKVDLV-PGYSPTEPNVVPVSALRGHGLQELKAELDAAVLKATGRQILTLRVRLAGA 360
Query: 457 EYQWLMKHTAVS--NIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
+ WL K V ++ +D +A+ + V++++ KF+ F
Sbjct: 361 QLSWLYKEATVQEVDVIPEDGAAD---VRVIISNSAYGKFRKLF 401
>gi|6562623|emb|CAA74749.2| GTP-binding protein [Homo sapiens]
gi|15779144|gb|AAH14636.1| Pseudoautosomal GTP-binding protein-like protein [Homo sapiens]
gi|30583559|gb|AAP36024.1| Pseudoautosomal GTP-binding protein-like [Homo sapiens]
gi|61362337|gb|AAX42202.1| pseudoautosomal GTP-binding protein-like [synthetic construct]
gi|61362343|gb|AAX42203.1| pseudoautosomal GTP-binding protein-like [synthetic construct]
Length = 403
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 171/404 (42%), Positives = 265/404 (65%), Gaps = 14/404 (3%)
Query: 105 TTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAV 164
T ++ +AE+ ALV ++ GW VV + ++S + D+K FGKGN E L ++RG VT V
Sbjct: 2 TRAEWQVAEATALVHTLDGWSVVQTMVVSTKTPDRKLIFGKGNFEHLTEKIRGSPDVTCV 61
Query: 165 FVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTR-- 222
F++V+ + +K L+ + V VFDR+ +V+ IF+ +A+T+EARLQ+A+AE+P +
Sbjct: 62 FLNVERMAAPTKKELEAAWGVEVFDRFTVVLHIFRCNARTKEARLQVALAEMPLHRSNLK 121
Query: 223 ------YRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
YR + M + F+ ++ +L E+E K++KAL++L+ +R ++R ++ R++F
Sbjct: 122 RDVAHLYRGVGSRYIMGSGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREF 181
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P ++VVGYTNCGKTTLIKALT D ++ PR+QLFATLDVT H G LP+R+ +LYVDTIGF+
Sbjct: 182 PVISVVGYTNCGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFL 241
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
S +P L+E F TLED +D+I+HV DVS+P+ QK V TL+ L+L +L+ ++
Sbjct: 242 SQLPHGLIESFSATLEDVAHSDLILHVRDVSHPEAELQKCSVLSTLRGLQLPAPLLDSMV 301
Query: 397 VVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGS 456
V NKVD V PG TE + +SA RG GL +LK ++ +LKATGR+ +T+RVR G+
Sbjct: 302 EVHNKVDLV-PGYSPTEPNVVPVSALRGHGLQELKAELDAAVLKATGRQILTLRVRLAGA 360
Query: 457 EYQWLMKHTAVS--NIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
+ WL K V ++ +D +A+ + V++++ KF+ F
Sbjct: 361 QLSWLYKEATVQEVDVIPEDGAAD---VRVIISNSAYGKFRKLF 401
>gi|62898385|dbj|BAD97132.1| pseudoautosomal GTP-binding protein-like protein variant [Homo
sapiens]
Length = 403
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 170/404 (42%), Positives = 265/404 (65%), Gaps = 14/404 (3%)
Query: 105 TTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAV 164
T ++ +AE+ ALV ++ GW VV + ++S + D+K FGKGN E L ++RG +T V
Sbjct: 2 TRAEWQVAEATALVHTLDGWSVVQTMVVSTKTPDRKLIFGKGNFEHLTEKIRGSPDITCV 61
Query: 165 FVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTR-- 222
F++V+ + +K L+ + V VFDR+ +V+ IF+ +A+T+EARLQ+A+AE+P +
Sbjct: 62 FLNVERMAAPTKKELEAAWGVEVFDRFTVVLHIFRCNARTKEARLQVALAEMPLHRSNLK 121
Query: 223 ------YRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
YR + M + F+ ++ +L E+E K++KAL++L+ +R ++R ++ R++F
Sbjct: 122 RDVAHLYRGVGSRYIMGSGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREF 181
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P ++VVGYTNCGKTTLIKALT D ++ PR+QLFATLDVT H G LP+R+ +LYVDTIGF+
Sbjct: 182 PVISVVGYTNCGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFL 241
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
S +P L+E F TLED +D+I+HV DVS+P+ QK V TL+ L+L +L+ ++
Sbjct: 242 SQLPHGLIESFSATLEDVAHSDLILHVRDVSHPEAELQKCSVLSTLRGLQLPAPLLDSMV 301
Query: 397 VVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGS 456
V NKVD V PG TE + +SA RG GL +LK ++ +LKATGR+ +T+RVR G+
Sbjct: 302 EVHNKVDLV-PGYSPTEPNVVPVSALRGHGLQELKAELDAAVLKATGRQILTLRVRLAGA 360
Query: 457 EYQWLMKHTAVS--NIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
+ WL K V ++ +D +A+ + V++++ KF+ F
Sbjct: 361 QLSWLYKEATVQEVDVIPEDGAAD---VRVIISNSAYGKFRKLF 401
>gi|24650079|ref|NP_651399.2| CG5116 [Drosophila melanogaster]
gi|23172301|gb|AAF56472.2| CG5116 [Drosophila melanogaster]
gi|241669012|gb|ACS68164.1| FI04601p [Drosophila melanogaster]
Length = 526
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/445 (40%), Positives = 271/445 (60%), Gaps = 21/445 (4%)
Query: 75 DEAQTGAL------GTDHQVFVVQPFIKWGKKMKRNTTRDF----MLAESKALVSSIQGW 124
DE GA+ + QV ++QP++KW K ++N D LAE+ AL+ S+ W
Sbjct: 82 DEVAGGAMRITRDIASSQQVLILQPYVKWAAK-RQNAPVDVRPEDQLAEATALIHSLPNW 140
Query: 125 RVVDSTIISLLSFDKKSFFGKGNLELLKR---QVRGDARVTAVFVSVDVLKLHQQKMLQD 181
+V + + L S +KK+ FG G L LK ++R + +T +FVS L Q++ L+
Sbjct: 141 QVARALKVPLESLEKKTLFGSGKLVELKELVAELRQERHLTCLFVSKGTLSFAQKRFLEA 200
Query: 182 LFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDS 241
F++PV DRY +VIQI + HA + EA+LQ+A+AELPY+W + + D
Sbjct: 201 EFRLPVMDRYSVVIQILRLHATSAEAKLQVAMAELPYIWAQAKDASVTQTRRQGYALTDL 260
Query: 242 KRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDS 301
++ +L RE+KL+ L++++ QR+++R K+++Q +P VAVVGYTN GKT+LIKALT +D+
Sbjct: 261 QKEILRTRERKLRAELDRVRRQRQLLRQKRKQQNYPIVAVVGYTNAGKTSLIKALTVEDA 320
Query: 302 LVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIII 361
L PRNQLFATLDVT H G LP L ++Y+DT+GF+S++PT L E F TLEDAMLAD+I+
Sbjct: 321 LQPRNQLFATLDVTAHAGCLPCNLEVIYMDTVGFMSDLPTGLFECFVATLEDAMLADVIV 380
Query: 362 HVVDVSNPDYLQQKQHVDETLQHLELE-------EKILEHVLVVGNKVDAVPPGERVTEE 414
HV D+S+P + Q+ HV+ TL+ L L ++ V NK D V + + +
Sbjct: 381 HVQDLSHPCHAAQRSHVEATLRSLAFNVAGGDSTASQLPPIINVYNKCDLVSQEAQSSAD 440
Query: 415 YDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDD 474
ISA TGL L + ++ IL ATGR+ + MRV SGG E WL K+ AV D
Sbjct: 441 PVHHISARAQTGLEPLLDDIEQQILTATGRRKLQMRVPSGGPEMAWLYKNAAVVETTADA 500
Query: 475 TSAEHLLLDVVMTDVIMNKFKHEFI 499
+ E L++ VV++ +++FK +F
Sbjct: 501 ENPERLMMHVVISQRTLDQFKRQFC 525
>gi|195349453|ref|XP_002041259.1| GM10247 [Drosophila sechellia]
gi|194122954|gb|EDW44997.1| GM10247 [Drosophila sechellia]
Length = 526
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 180/444 (40%), Positives = 270/444 (60%), Gaps = 19/444 (4%)
Query: 75 DEAQTGAL------GTDHQVFVVQPFIKWGKKMKR---NTTRDFMLAESKALVSSIQGWR 125
DE GA+ + QV ++QP++KW K + + + LAE+ AL+ S+ W+
Sbjct: 82 DEVAGGAMRITRDIASSQQVLILQPYVKWAAKRQSGPLDVRPEDQLAEASALIHSLPNWQ 141
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKR---QVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
V + + L S +KK+ FG G L LK ++R + +T +FVS L Q++ L+
Sbjct: 142 VARALKVPLESLEKKTLFGSGKLVELKELVAELRQERHLTCLFVSKGTLSFAQKRFLEAE 201
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSK 242
F++PV DRY +VIQI + HA + EA+LQ+A+AELPY+W + + D +
Sbjct: 202 FRLPVMDRYSVVIQILRLHATSAEAKLQVAMAELPYIWAQAKDASVTQTRRQGYALTDLQ 261
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
+ +L RE+KL+ L++++ QR+++R K+++Q +P VAVVGYTN GKT+LIKALT +D+L
Sbjct: 262 KEILRTRERKLRTELDRVRRQRQLLRQKRKQQNYPIVAVVGYTNAGKTSLIKALTVEDAL 321
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
PRNQLFATLDVT H G LP L ++Y+DT+GF+S++PT L E F TLEDAMLAD+I+H
Sbjct: 322 QPRNQLFATLDVTAHAGCLPCNLEVIYMDTVGFMSDLPTGLFECFVATLEDAMLADVIVH 381
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELE-------EKILEHVLVVGNKVDAVPPGERVTEEY 415
V D+S+P + Q+ HV+ TL+ L L ++ V NK D V + + +
Sbjct: 382 VQDLSHPCHAAQRSHVEATLRSLAFNVAGGDSTASQLPPIINVYNKCDLVSQEAQSSSDP 441
Query: 416 DLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDT 475
ISA TGL L + ++ IL ATGR+ + MRV SGG E WL K+ AV D
Sbjct: 442 VHHISARAQTGLEPLLDDIEQQILTATGRRKLQMRVPSGGPEMAWLYKNAAVVETTADAE 501
Query: 476 SAEHLLLDVVMTDVIMNKFKHEFI 499
+ E L++ VV++ +++FK +F
Sbjct: 502 NPERLMMHVVISQRTLDQFKRQFC 525
>gi|17946430|gb|AAL49248.1| RE67480p [Drosophila melanogaster]
Length = 526
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 181/445 (40%), Positives = 270/445 (60%), Gaps = 21/445 (4%)
Query: 75 DEAQTGAL------GTDHQVFVVQPFIKWGKKMKRNTTRDF----MLAESKALVSSIQGW 124
DE GA+ + QV ++QP++KW K ++N D LAE+ AL+ S+ W
Sbjct: 82 DEVAGGAMRITRDIASSQQVLILQPYVKWAAK-RQNAPVDVRPEDQLAEATALIHSLPNW 140
Query: 125 RVVDSTIISLLSFDKKSFFGKGNLELLKR---QVRGDARVTAVFVSVDVLKLHQQKMLQD 181
+V + + L S +KK+ FG G L LK ++R + +T +FVS L Q++ L+
Sbjct: 141 QVARALKVPLESLEKKTLFGSGKLVELKELVAELRQERHLTCLFVSKGTLSFAQKRFLEA 200
Query: 182 LFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDS 241
F++PV DRY +VIQI + HA + EA+LQ+A+AELPY+W + + D
Sbjct: 201 EFRLPVMDRYSVVIQILRLHATSAEAKLQVAMAELPYIWAQAKDASVTQTRRQGYALTDL 260
Query: 242 KRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDS 301
++ +L RE+KL+ L++++ QR+++R K+++Q +P VAVVGYTN GKT+LIKALT +D+
Sbjct: 261 QKEILRTRERKLRAELDRVRRQRQLLRQKRKQQNYPIVAVVGYTNAGKTSLIKALTVEDA 320
Query: 302 LVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIII 361
L PRNQLFATLDVT H G LP L ++Y+DT+GF+S++PT L E F TLEDAMLAD+I+
Sbjct: 321 LQPRNQLFATLDVTAHAGCLPCNLEVIYMDTVGFMSDLPTGLFECFVATLEDAMLADVIV 380
Query: 362 HVVDVSNPDYLQQKQHVDETLQHLELE-------EKILEHVLVVGNKVDAVPPGERVTEE 414
HV D+S+P + Q+ HV+ TL+ L L ++ V NK D V + + +
Sbjct: 381 HVQDLSHPCHAAQRSHVEATLRSLAFNVAGGDSTASQLPPIINVYNKCDLVSQEAQSSAD 440
Query: 415 YDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDD 474
ISA TGL L + ++ IL ATGR+ + MRV SGG E WL K+ AV D
Sbjct: 441 PVHHISARAQTGLEPLLDDIEQQILTATGRRKLQMRVPSGGPEMAWLYKNAAVVETTADA 500
Query: 475 TSAEHLLLDVVMTDVIMNKFKHEFI 499
+ E L++ V++ +++FK +F
Sbjct: 501 ENPERLMMHAVISQRTLDQFKRQFC 525
>gi|195573905|ref|XP_002104932.1| GD21220 [Drosophila simulans]
gi|194200859|gb|EDX14435.1| GD21220 [Drosophila simulans]
Length = 526
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 180/444 (40%), Positives = 268/444 (60%), Gaps = 19/444 (4%)
Query: 75 DEAQTGAL------GTDHQVFVVQPFIKWGKKMKRNTT---RDFMLAESKALVSSIQGWR 125
DE GA+ + QV ++QP++KW K + LAE+ AL+ S+ W+
Sbjct: 82 DEVAGGAMRITRDIASSQQVLILQPYVKWAAKRHSGPVDVRPEDQLAEASALIHSLPNWQ 141
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKR---QVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
V + + L S +KK+ FG G L LK ++R + +T +FVS L Q++ L+
Sbjct: 142 VARALKVPLESLEKKTLFGSGKLVELKELVAELRQERHLTCLFVSKGTLSFAQKRFLEAE 201
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSK 242
F++PV DRY +VIQI + HA + EA+LQ+A+AELPY+W + + D +
Sbjct: 202 FRLPVMDRYSVVIQILRLHATSAEAKLQVAMAELPYIWAQAKDSSVTQTRRQGYALTDLQ 261
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
+ +L RE+KL+ L++++ QR+++R K+++Q +P VAVVGYTN GKT+LIKALT +D+L
Sbjct: 262 KEILRTRERKLRAELDRVRRQRQLLRQKRKQQNYPIVAVVGYTNAGKTSLIKALTVEDAL 321
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
PRNQLFATLDVT H G LP L ++Y+DT+GF+S++PT L E F TLEDAMLAD+I+H
Sbjct: 322 QPRNQLFATLDVTAHAGCLPCNLEVIYMDTVGFMSDLPTGLFECFVATLEDAMLADVIVH 381
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELE-------EKILEHVLVVGNKVDAVPPGERVTEEY 415
V D+S+P + Q+ HV+ TL+ L L ++ V NK D V + + +
Sbjct: 382 VQDLSHPCHAAQRSHVEATLRSLAFNVAGGDSTASQLPPIINVYNKCDLVSQEAQSSSDP 441
Query: 416 DLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDT 475
ISA TGL L + ++ IL ATGR+ + MRV SGG E WL K+ AV D
Sbjct: 442 VHHISARAQTGLEPLLDDIEKQILTATGRRKLQMRVPSGGPEMAWLYKNAAVVETTADAE 501
Query: 476 SAEHLLLDVVMTDVIMNKFKHEFI 499
+ E L++ VV++ +++FK +F
Sbjct: 502 NPERLMMHVVISQRTLDQFKRQFC 525
>gi|195152425|ref|XP_002017137.1| GL22142 [Drosophila persimilis]
gi|194112194|gb|EDW34237.1| GL22142 [Drosophila persimilis]
Length = 525
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/446 (40%), Positives = 272/446 (60%), Gaps = 25/446 (5%)
Query: 75 DEAQTGAL------GTDHQVFVVQPFIKWGKKMKR--NTTRDF-MLAESKALVSSIQGWR 125
DE GA+ + QV ++QP++KW K ++ + R LAE+ AL+ S+ W+
Sbjct: 84 DEVAGGAMRISRDIASTQQVLILQPYVKWSAKRQKIPSDVRPVDQLAEASALIHSLPNWQ 143
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQV---RGDARVTAVFVSVDVLKLHQQKMLQDL 182
V + + L S ++K+ FG G + LK + R + +T +FVS L Q++ L+
Sbjct: 144 VAKALKVPLESLERKTLFGSGKMVELKALIADLRQEKHLTCLFVSKGTLSFAQKRFLEAE 203
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSK 242
F++PV DRY +VIQI + HA T EARLQ+A+AELPY+W++ + D +
Sbjct: 204 FRLPVMDRYSVVIQILRLHATTAEARLQVAMAELPYIWSQAKDASVTQTRRQGYSLTDLQ 263
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
+ +L RE+KL+ L++++ QR+++R K+++Q +P VAVVGYTN GKT+LIKALT +D+L
Sbjct: 264 KEILRTRERKLRAELDRVRRQRQLLRQKRKQQNYPIVAVVGYTNAGKTSLIKALTVEDAL 323
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
PRNQLFATLDVT H G LP L+++Y+DT+GF+S++PT L E F TLEDAMLAD+I+H
Sbjct: 324 QPRNQLFATLDVTAHAGQLPCNLQVIYMDTVGFMSDLPTGLFECFVATLEDAMLADVIVH 383
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELE-------EKILEHVLVVGNKVDAV--PPGERVTE 413
V D+S+P + Q+ HV+ TL+ L L ++ V NK D V P +
Sbjct: 384 VQDLSHPCHAAQRSHVESTLRSLAFNVSGGDSATSQLPPIINVYNKCDLVSQPSSDAAVH 443
Query: 414 EYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIRED 473
ISA TGL L +++ IL ATGR+ + MRV SGG E WL K+ AV + D
Sbjct: 444 H----ISARAQTGLEPLLADIEEQILAATGRRKLQMRVPSGGPEMAWLYKNAAVVDTVAD 499
Query: 474 DTSAEHLLLDVVMTDVIMNKFKHEFI 499
+ L++ VV++ +++FK EF+
Sbjct: 500 EAYPNRLMMHVVISQRTLDQFKREFL 525
>gi|355693964|gb|AER99512.1| GTP binding protein 6 [Mustela putorius furo]
Length = 402
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/402 (43%), Positives = 264/402 (65%), Gaps = 13/402 (3%)
Query: 109 FMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSV 168
+ +AE++ALV ++ GW VV+S ++ + D K FGKG LE L +VRG +TAVF++V
Sbjct: 1 WQVAEAEALVHTLDGWSVVESMVVPSKTPDGKLTFGKGTLEHLTERVRGSPEITAVFLNV 60
Query: 169 DVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-- 226
+ L +K L+ + VPVFDR+ +V+ IF+ +A+T+EARLQ+A+AELP L +R ++
Sbjct: 61 ERLATPTKKELEARWGVPVFDRFTVVLHIFRCNARTKEARLQVALAELPLLRSRLKSSTA 120
Query: 227 -EDATN------MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
DA M + F+ ++ +L E+E K++KAL +L+ +R ++ +++RQ+FP +
Sbjct: 121 RPDAQGWGSRYIMGSGESFVQVQQRLLKEKEMKIRKALERLRQKRRLLGTRRRRQEFPVI 180
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTNCGKTTLIKALT DD++ PR+QLFATLDVT H G LP+R+ ++Y+DTIGF+S +
Sbjct: 181 AVVGYTNCGKTTLIKALTGDDAVQPRDQLFATLDVTAHAGWLPSRMAVIYMDTIGFLSQL 240
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
P +L+E F TLED +D+I+HV DV++P+ QK V +L+ L L +L+ +L V
Sbjct: 241 PHSLIESFSATLEDVAHSDLIVHVRDVTHPETELQKASVLSSLRGLRLPAPLLDSMLEVH 300
Query: 400 NKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQ 459
NK D V PG E + +SA RG GL +LK +++D +L+ATGR+ +T+RVR G++
Sbjct: 301 NKTDLV-PGYSPVEPQAVAVSALRGHGLPELKARLEDAVLRATGRQVLTLRVRLAGAQLS 359
Query: 460 WLMKHT---AVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
WL + AV I E + + VV++ KF+ F
Sbjct: 360 WLHQEATVQAVDVIPEAGVAGVVADVTVVISKSAYGKFRKLF 401
>gi|359324133|ref|XP_850911.3| PREDICTED: putative GTP-binding protein 6 [Canis lupus familiaris]
Length = 526
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 177/428 (41%), Positives = 278/428 (64%), Gaps = 16/428 (3%)
Query: 82 LGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKS 141
LGT +V ++ P +K G + + T ++ +AE++ALV ++ GW VV+S ++ S D K
Sbjct: 102 LGT-QRVCLIHPEVKRGPEKPKLTRAEWQVAEAEALVHTLDGWSVVESMVVPSKSSDGKL 160
Query: 142 FFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAH 201
FGKG LE L ++RG +TAVF++V+ L +K L+ + V V DR+ +V+ IF+ +
Sbjct: 161 IFGKGTLEHLTEKIRGTPEITAVFLNVERLAAPTKKELEAAWGVQVCDRFTVVLHIFRCN 220
Query: 202 AKTREARLQIAIAELPYLWTRYRT---IEDATN------MNITKGFLDSKRMVLMEREQK 252
A+T+EARLQ+A+AELP L +R +T + D M + F+ ++ +L ++E K
Sbjct: 221 ARTKEARLQVALAELPLLRSRLKTSMALPDRRGWGSRYIMGSGESFVQVQQRLLKDQEMK 280
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
++KAL +L+ +R ++ +++RQ+FP ++VVGYTNCGKTTLIKALT DD++ PR+QLFATL
Sbjct: 281 IRKALERLRNKRRLLGRQRRRQEFPVISVVGYTNCGKTTLIKALTGDDAVQPRDQLFATL 340
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D+T H G LP+R+ ++Y+DTIGF+S +P +L+E F TLED +D+I+HV D+S+P+
Sbjct: 341 DITAHAGWLPSRVAVIYMDTIGFLSQLPHSLIESFSATLEDVAHSDLIVHVRDMSHPETE 400
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKE 432
QK V TL+ L L +L+ VL V NKVD V PG R + +SA G GL +LK
Sbjct: 401 LQKASVLSTLRGLRLPAALLDSVLEVHNKVDLV-PGYRPAGPQAVAVSALLGQGLPELKA 459
Query: 433 KVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLD--VVMTDVI 490
+++D +L+ATGR+ +T+RV+ G++ WL + V ++ D E + D VV++
Sbjct: 460 RLEDAVLRATGRQVLTLRVQLAGAQLSWLHQEATVQDV---DVIPEAGVADVTVVISSSA 516
Query: 491 MNKFKHEF 498
+F+ F
Sbjct: 517 YGRFRKLF 524
>gi|47214135|emb|CAG01393.1| unnamed protein product [Tetraodon nigroviridis]
Length = 510
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 173/437 (39%), Positives = 276/437 (63%), Gaps = 22/437 (5%)
Query: 78 QTGALGTDH---QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISL 134
Q GA G ++ +V P +KWG + + TT + MLAE+ LV+++ W VVD+ ++S
Sbjct: 78 QRGAAGVGQGQQRLVIVHPDVKWGSRKQHLTTAELMLAEAVGLVNTLDNWTVVDTVVLST 137
Query: 135 LSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIV 194
+ +KK FGKGN + L ++R A +TAVFV+V+ L ++ L++ + V V DRY +V
Sbjct: 138 KTPEKKRIFGKGNFQSLTEKIRQTAGITAVFVNVEHLSPLSERELEEAWGVKVLDRYSVV 197
Query: 195 IQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKG-----------FLDSKR 243
+ IF+ +A+T+EA+LQI++AE+P L +R + + N++ G L+ ++
Sbjct: 198 LHIFRCNARTKEAKLQISLAEIPLLRSRLKN--EIANLDQQGGRSKYIGGSGETLLEVQQ 255
Query: 244 MVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLV 303
+L ERE K++ AL KL+ +R ++R ++++Q+FP V+V+GYTN GKTTLIK+LT D L
Sbjct: 256 RLLKEREMKIRTALEKLRRKRHLLRAQRKQQEFPMVSVLGYTNSGKTTLIKSLTGDSGLQ 315
Query: 304 PRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHV 363
P+NQLFATLDVT H G LPN + +LYVDTIGF+S +P L++ F TLED +D+++HV
Sbjct: 316 PKNQLFATLDVTVHAGQLPNHMTVLYVDTIGFLSQLPHRLIDSFSATLEDIKHSDLLLHV 375
Query: 364 VDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATR 423
DVS+P+ L QK +V L++L++ ++++ ++ V NK+D V + T+ L +SA
Sbjct: 376 RDVSHPETLNQKANVLNVLKNLQIPDRLIGSMIEVHNKIDLV-DSYQFTDPRALPVSALG 434
Query: 424 GTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSN--IREDDTSAEHLL 481
G GL +LKE V+ I+ ATG+ + + V + WL K AV + + DD SA +
Sbjct: 435 GRGLDRLKEAVEAEIVAATGKHTLALPVDLSSPQLSWLYKEAAVQDLEVNADDGSA---V 491
Query: 482 LDVVMTDVIMNKFKHEF 498
+ VV++ ++K F
Sbjct: 492 VKVVISAAAYGRYKKLF 508
>gi|363728945|ref|XP_416868.3| PREDICTED: putative GTP-binding protein 6 [Gallus gallus]
Length = 536
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 176/430 (40%), Positives = 281/430 (65%), Gaps = 19/430 (4%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
H+V VV P ++WG K TT + +AE+ ALV ++Q W V+D II + DKK FGK
Sbjct: 109 HRVAVVHPAVRWGPKKPLLTTAELQMAEAVALVDTLQNWTVLDKIIIPTKNPDKKFVFGK 168
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
GN E L +++ VTAVF++V+ + +K L+D + V VFDRY +V+ IF+ +A+T+
Sbjct: 169 GNFEALTERIKKLPHVTAVFLNVERISSVTKKELEDAWGVKVFDRYTVVLHIFRCNARTK 228
Query: 206 EARLQIAIAELPYLWTRYRTIEDATNMNITKG-----------FLDSKRMVLMEREQKLK 254
EA+LQIA+AE+P L + +T + ++++ +G F++++ +L E+E K++
Sbjct: 229 EAKLQIALAEIPLLRSNLKT--EVSHLDQQRGGSRYIMGSGETFMETQNRLLREKELKIR 286
Query: 255 KALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDV 314
AL KL+ +R ++R ++++++FP ++V+GYTNCGKTTLIKALT D + PR+QLFATLD+
Sbjct: 287 NALEKLRKKRSLLRTQRRKREFPIISVMGYTNCGKTTLIKALTGDAGIQPRDQLFATLDI 346
Query: 315 TTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQ 374
T H G LP+ + ++YVDTIGF+S +P L+E F TLE+ +D+I+HV D+++P+ + Q
Sbjct: 347 TAHAGYLPSHMAVIYVDTIGFLSELPHNLVESFSATLEEVAYSDLIVHVRDITHPETILQ 406
Query: 375 KQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKV 434
K V L+ L L +LE ++ V NKVD + + TEE L ISA G GL +LKE++
Sbjct: 407 KASVLSVLKDLNLPSHLLESMVEVHNKVDLI-ESYQPTEENALAISALHGHGLEELKEEI 465
Query: 435 QDMILKATGRKNITMRVRSGGSEYQWLMKHTAVS--NIREDDTSAEHLLLDVVMTDVIMN 492
+ ILKATG+K +T+ V G + WL K +AV ++ DD +A + V++++
Sbjct: 466 EKKILKATGKKILTITVNLQGPQLSWLYKESAVQEVDVMPDDGTAR---VKVIISNSAFG 522
Query: 493 KFKHEFISSR 502
K+++ F +S+
Sbjct: 523 KYRNLFPNSK 532
>gi|354504605|ref|XP_003514364.1| PREDICTED: putative GTP-binding protein 6-like [Cricetulus griseus]
Length = 465
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 168/408 (41%), Positives = 257/408 (62%), Gaps = 21/408 (5%)
Query: 105 TTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAV 164
T + +AE+ ALV ++ GW VV + ++ D + FGKGN + L ++RG +T+V
Sbjct: 63 TLLELQVAEAAALVHALHGWSVVQTLVVPTKVPDSRLVFGKGNFQDLTEKIRGCPDITSV 122
Query: 165 FVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYL----- 219
F++V+ + +K L+ + V VFDR+ IV+ IF+ +A+T+EARLQ+A+AE+P L
Sbjct: 123 FLNVERMAAPTKKELEAAWGVEVFDRFTIVLHIFRCNARTKEARLQLALAEIPLLRSTLS 182
Query: 220 ----WTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQK 275
W + M + F + VL E+E K+++AL +L+ +R ++R ++ +++
Sbjct: 183 RHSAWLDHERRGPRYIMGSGESFTKLRHRVLKEKEAKIRRALERLRDKRSLLRRQRTQRE 242
Query: 276 FPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGF 335
FP V+VVGYTNCGKTTLIKALT + ++ PR+QLFATLDVT H G LP+R+ +LY+DTIGF
Sbjct: 243 FPIVSVVGYTNCGKTTLIKALTGEAAMQPRDQLFATLDVTAHAGSLPSRIPVLYMDTIGF 302
Query: 336 ISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV 395
+S +P +L++ F TLED +D+I+HV DVS+P QQK V TLQ L+L +L+ +
Sbjct: 303 LSQLPHSLIQSFSATLEDVAHSDVIMHVRDVSHPSTEQQKASVLSTLQGLQLPSALLDSM 362
Query: 396 LVVGNKVDAV----PPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
L V NKVD V PPG V L +SA G GL +LK +++ +L+ATGR+ +T+ V
Sbjct: 363 LEVHNKVDLVPGYSPPGPGV-----LAVSALLGHGLDELKAALEESVLRATGRQVLTLCV 417
Query: 452 RSGGSEYQWLMKHTAVSNIRE-DDTSAEHLLLDVVMTDVIMNKFKHEF 498
R GG + WL K V ++E +T A H + V+++ +F+ F
Sbjct: 418 RLGGPQLSWLYKEATVQQVQELPETGAAH--VTVIISRAAYGRFRKLF 463
>gi|390347169|ref|XP_798244.3| PREDICTED: putative GTP-binding protein 6-like [Strongylocentrotus
purpuratus]
Length = 536
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/454 (38%), Positives = 276/454 (60%), Gaps = 19/454 (4%)
Query: 58 DNSQDDLEESDEFKT-IRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKA 116
D Q+ EE+ E+ + + G G H+V V+QP IK ++ K ++ + + E+++
Sbjct: 83 DEDQEYGEEAIEYANELVNRGHQGLQG--HRVLVIQPVIKTERRHKSDS--ELKMIEAQS 138
Query: 117 LVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQ 176
LV+++Q W + DS ++++ S KK FG+G E L Q+R +T+VF++VD L Q+
Sbjct: 139 LVTTLQTWSLFDSRLMTVKSLSKKYMFGQGTFEELTAQIRSQPDITSVFLNVDRLSGVQK 198
Query: 177 KMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITK 236
K +++ + +PV+DRY +V+QIFK HA ++EA+LQIA+AEL + R ++ +++
Sbjct: 199 KTMEEEWGLPVYDRYEVVLQIFKEHASSKEAKLQIALAELHF--RRSHLHQETFDLDQQS 256
Query: 237 G-----------FLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYT 285
G L+ K+ L ++E L+KAL KLKG+R ++R ++R+ FP VAVVGYT
Sbjct: 257 GAQQYIGGGGETLLEKKQRQLRDKEGALRKALEKLKGKRALLRKGRERKHFPHVAVVGYT 316
Query: 286 NCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLE 345
N GKT+LIKA+T D L PRNQLFATLDVT+H G L NR+ ++Y+DT+GFIS +P L+
Sbjct: 317 NAGKTSLIKAMTGDTRLEPRNQLFATLDVTSHAGYLSNRMPVIYIDTVGFISQLPHQLIA 376
Query: 346 PFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV 405
F TLED + AD+++HV DVS+P+ QK V L L + + +L++++ V NK+D +
Sbjct: 377 SFAATLEDVLCADLLVHVRDVSHPESENQKIQVISVLHDLGVNQHLLDNMIEVNNKIDLL 436
Query: 406 P-PGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKH 464
E + +SAT GTGL QLKE ++ +++ T +R+ G+ WL K
Sbjct: 437 HNKSEFAALDECYPVSATHGTGLNQLKEVIEVKLVEVTKSVMCDVRIPQAGTHLGWLYKE 496
Query: 465 TAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
V ++ + EHLL+ V + +KF ++
Sbjct: 497 ATVQDVSTIEGDTEHLLVSAVFSCTAYSKFTAKY 530
>gi|326668705|ref|XP_691680.5| PREDICTED: putative GTP-binding protein 6 [Danio rerio]
Length = 543
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 177/461 (38%), Positives = 287/461 (62%), Gaps = 27/461 (5%)
Query: 58 DNSQDDLEESDEF------KTIRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFML 111
DN+ D+ E DE K +++ +G DH+VF+V P +KWG + + TT +
Sbjct: 76 DNTDDNNVEEDEIDDAEIEKLFQEQIPSGIGKEDHRVFIVHPDVKWGSRKQYLTTAALQM 135
Query: 112 AESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVL 171
E+ LV ++ W VVD I+S + +KK FGKGN ++L ++R VTAVFV+V+ L
Sbjct: 136 EEAVGLVKTLHKWSVVDKLILSTKTPEKKRIFGKGNFQMLTEKIRATPGVTAVFVNVERL 195
Query: 172 KLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN 231
+K L++ + V V DRY +V+ IF+ +AKT+EA+LQI++AE+P +R R + N
Sbjct: 196 SPSSEKDLEEAWGVKVLDRYSLVLHIFRCNAKTKEAKLQISLAEIPLFRSRLRN--EVAN 253
Query: 232 MNITKG-----------FLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
++ G + ++ +L ERE K++ AL +L+ +R ++R++++ + FP ++
Sbjct: 254 LDQQGGGPRYIMGSGETLYEMQQRLLKERELKIRSALERLRRKRNLLRSQRKHKDFPIIS 313
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
V+GYTNCGKTTLIKALT DD L P++QLFATLDVT H G LP + +LYVDTIGF+S +P
Sbjct: 314 VMGYTNCGKTTLIKALTGDDGLQPKDQLFATLDVTVHAGQLPCHMTVLYVDTIGFLSQLP 373
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
L++ F TLED + +D+IIHV D+S+P+ + QK +V L +L++ E++L ++ V N
Sbjct: 374 HQLIDSFSATLEDVIHSDLIIHVRDISHPETVSQKVNVLNVLNNLQIPERLLTSIIEVHN 433
Query: 401 KVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQW 460
K+D + G ++ + ISA + GL LKEK+++ +LK TG++ +T++V+ S+ W
Sbjct: 434 KIDLI-EGYESSDPEVIPISALKQCGLEALKEKIEEAVLKCTGKQMMTLKVQLNTSQLSW 492
Query: 461 LMKHT---AVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
L K AV N+ +D T+ + V+++ +++ F
Sbjct: 493 LYKEATVQAVDNVGDDCTAN----VKVIISQAAYGRYRKLF 529
>gi|402913008|ref|XP_003919023.1| PREDICTED: putative GTP-binding protein 6 [Papio anubis]
Length = 500
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 266/423 (62%), Gaps = 30/423 (7%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
+V +V P +KWG + T ++ +AE+ ALV ++ GW VV T++++ + +K
Sbjct: 96 QRVCLVHPDVKWGPGKPQMTRAEWQVAEATALVHTLDGWSVVQ-TMVNVFTIEK------ 148
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
+RG +T VF++V+ + +K L+ + V VFDR+ +V+ IF+ +A+T+
Sbjct: 149 ---------IRGSPDITCVFLNVERMAAPTKKELEAAWGVEVFDRFTVVLHIFRCNARTK 199
Query: 206 EARLQIAIAELPYLWTR--------YRTIEDATNMNITKGFLDSKRMVLMEREQKLKKAL 257
EARLQ+A+AE+P + YR M + F+ ++ +L E+E K++KAL
Sbjct: 200 EARLQVALAEIPLHRSNLKRDVAHLYRGAGSRYIMGSGESFMQVQQRLLREKEAKIRKAL 259
Query: 258 NKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTH 317
++L+ +R ++R ++ R++FP V+VVGYTNCGKTTLIKALT D ++ PR+QLFATLDVT H
Sbjct: 260 DRLRKKRHLLRQQRTRREFPVVSVVGYTNCGKTTLIKALTGDAAIRPRDQLFATLDVTVH 319
Query: 318 EGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQH 377
G LP+R+ +LYVDTIGF+S +P L+E F TLED +D+++HV DVS+P+ QK+
Sbjct: 320 AGALPSRMTVLYVDTIGFLSQLPHGLIESFSATLEDVAHSDLVVHVRDVSHPEAELQKRS 379
Query: 378 VDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDM 437
V TL+ L+L +L+ ++ V NKVD V PG TE + +SA G GL +LK ++
Sbjct: 380 VLSTLRSLQLPAPLLDSMVEVHNKVDLV-PGYSPTEPNAVPVSALLGHGLQELKAELDAA 438
Query: 438 ILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIR--EDDTSAEHLLLDVVMTDVIMNKFK 495
+LKATGR+ +T+RVR G++ WL K V ++ +D +A+ + V+++D KF+
Sbjct: 439 VLKATGRQILTLRVRLAGAQLSWLYKEATVQDVDVIPEDGAAD---VTVIISDSAYGKFR 495
Query: 496 HEF 498
F
Sbjct: 496 KLF 498
>gi|449483705|ref|XP_002195101.2| PREDICTED: putative GTP-binding protein 6 [Taeniopygia guttata]
Length = 478
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/431 (38%), Positives = 269/431 (62%), Gaps = 19/431 (4%)
Query: 84 TDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFF 143
+ +V +V P +KWG + TT + +AE+ ALV ++Q W V+D II + +KK F
Sbjct: 49 SAQRVAIVNPAVKWGPQKSPLTTAELQIAEAVALVDTLQNWTVLDKIIIPTKNPNKKFVF 108
Query: 144 GKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAK 203
GKGN ++L +++ VTAVF++V+ + +K L+ + VPVFDRY +V+ IF+ +A+
Sbjct: 109 GKGNFQVLTEKIKKLPHVTAVFLNVERISSLTKKELEGAWGVPVFDRYTVVLHIFRCNAR 168
Query: 204 TREARLQIAIAELPYLWTRYRTIEDATN---------MNITKGFLDSKRMVLMEREQKLK 254
T+EA+LQIA+AE+P L + + + M + FL+++ VL ERE K++
Sbjct: 169 TKEAKLQIALAEIPLLRSNLKNELSQRDQQRGGSRYIMGSGETFLETQNRVLKERELKIR 228
Query: 255 KALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDV 314
AL KL+ +R ++R ++++ +FP V+V+GYTN GKTTLIKALT + L PR+QLFATLD+
Sbjct: 229 NALEKLRRKRALLRAQRRKCEFPMVSVMGYTNSGKTTLIKALTGEAGLQPRDQLFATLDI 288
Query: 315 TTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQ 374
T H G LP+ + ++YVDTIGF++++P L+E F TLE+ +D+I+HV D+++P+ + Q
Sbjct: 289 TAHAGYLPSHMAVIYVDTIGFLTDLPHNLVESFSATLEEVAYSDLIVHVRDITHPETILQ 348
Query: 375 KQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERV--TEEYDLLISATRGTGLAQLKE 432
K V L++L L +L+ ++ V NKVD ER TEE L +SA G GL +LK+
Sbjct: 349 KATVLSVLRNLNLPSHLLDSMVEVHNKVDLT---ERYKPTEENALAVSALHGYGLEELKQ 405
Query: 433 KVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIR--EDDTSAEHLLLDVVMTDVI 490
+++ IL ATG+K +T+ + G + WL K V + +D A + V++
Sbjct: 406 EIEKKILTATGKKILTVNINLEGPQLSWLYKEATVQEVEVMPEDGKAR---VKVIIGSSA 462
Query: 491 MNKFKHEFISS 501
++K+ F +S
Sbjct: 463 FGRYKNLFPNS 473
>gi|395527048|ref|XP_003765663.1| PREDICTED: putative GTP-binding protein 6 [Sarcophilus harrisii]
Length = 518
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/427 (40%), Positives = 274/427 (64%), Gaps = 21/427 (4%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
+VF++ P +KWG K + T + +AE+K LV ++ W V ++ I+S + DKK FGK
Sbjct: 97 QRVFLLHPDVKWGAKKQTLTRAELQVAEAKTLVHTLLNWSVEETMIVSTKTPDKKLVFGK 156
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
GN ELL ++RG ++T+VF++V+ + +K L+ + V VFDR+ IV+ IF+ +AKT+
Sbjct: 157 GNFELLTEKIRGSPQITSVFLNVERMSPLTKKELEAAWGVEVFDRFTIVLHIFRCNAKTK 216
Query: 206 EARLQIAIAELPYLWTRYRTIEDATNMNITKG-----------FLDSKRMVLMEREQKLK 254
EA+LQIA+AE+P L R + +++ G FL ++ VL E+E K+K
Sbjct: 217 EAKLQIALAEIPLL--RSNLKNEVAHLDQQGGGSRYIMGSGETFLQIQQRVLKEKEIKIK 274
Query: 255 KALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDV 314
KAL KLK +R ++R+++++++ P ++++GYTNCGKTTLIKALT D ++ PR+QLFATLD+
Sbjct: 275 KALEKLKKRRHLLRSQRKKRELPIISIMGYTNCGKTTLIKALTGDAAIQPRDQLFATLDI 334
Query: 315 TTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQ 374
T H G LP+ + ++YVDTIGF+S +P L+E F TLED +D+IIHV D+S+P+ Q
Sbjct: 335 TAHSGSLPSHMTVVYVDTIGFLSQLPHDLIESFSATLEDVAHSDVIIHVRDISHPETDLQ 394
Query: 375 KQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKV 434
K V L++L L ++L+ ++ V NKVD V E TE + ISA G GL +LK ++
Sbjct: 395 KASVLSVLKNLNLPNQLLDSIIEVHNKVDLVESYES-TEPNAITISALLGHGLEKLKAEI 453
Query: 435 QDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSN---IREDDTSAEHLLLDVVMTDVIM 491
+ +LKATG+K +T+ ++ G++ WL K V I E+ T+ + V++++
Sbjct: 454 ESAVLKATGKKLLTLNIKLEGAQLSWLYKEATVQEVDVIPENGTAN----VKVIISNSAY 509
Query: 492 NKFKHEF 498
K++ F
Sbjct: 510 GKYRKLF 516
>gi|242009617|ref|XP_002425579.1| GTP-binding protein hflx, putative [Pediculus humanus corporis]
gi|212509472|gb|EEB12841.1| GTP-binding protein hflx, putative [Pediculus humanus corporis]
Length = 377
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 235/354 (66%), Gaps = 12/354 (3%)
Query: 47 LAESKALVKFSDNSQDDLEESDEF------KTIRDEAQTGALGTDHQVFVVQPFIKWGKK 100
L + K ++ +DNS+ EE D F K I E LG HQVFV+QP IKWG+K
Sbjct: 23 LNKFKHKLRVTDNSESTSEEDDNFLNSNFDKII--ERSLLPLGGHHQVFVIQPVIKWGQK 80
Query: 101 MKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDAR 160
KRNTT + L ES LV +++ W+VV I+ L SF++K+FFGKGNL+L++ +
Sbjct: 81 KKRNTTPELQLEESITLVKTLRNWKVVGEAIVKLESFNRKTFFGKGNLQLIRELILKHPT 140
Query: 161 VTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLW 220
++AVF+S ++LKL QQK+L+++ VPVFDRY +++ I + HAKTREA+LQI +AELPYL+
Sbjct: 141 ISAVFLSTELLKLVQQKILEEMLTVPVFDRYTLIMHILREHAKTREAKLQIKLAELPYLY 200
Query: 221 TRYRTIEDATNMN----ITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
++ ++ IT +++ + E+E +++ L L+ RE +RNK+++
Sbjct: 201 KVMGGLKSGYGIHFFNEITSRSRAARKEIFKEKEAQIRNELAILRKHREELRNKRKKNDM 260
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P +AVVGYTN GKT+L+KALT + L P++ LFATLDVT H G LP+ L + +VDT+GF+
Sbjct: 261 PVIAVVGYTNAGKTSLVKALTGKEKLEPKDYLFATLDVTCHIGTLPSSLPVYFVDTLGFM 320
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEK 390
++IPT L+E F TLED AD+IIHV D+S+P+ + Q +V +TL L L ++
Sbjct: 321 NDIPTFLIESFVYTLEDVKYADVIIHVRDISHPNTVAQNDNVIQTLHQLNLSDE 374
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 28/39 (71%)
Query: 17 ALGTDHQVFVIQPFIKWGKKMKRNTTRDFMLAESKALVK 55
LG HQVFVIQP IKWG+K KRNTT + L ES LVK
Sbjct: 61 PLGGHHQVFVIQPVIKWGQKKKRNTTPELQLEESITLVK 99
>gi|126337122|ref|XP_001365379.1| PREDICTED: putative GTP-binding protein 6 [Monodelphis domestica]
Length = 515
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 176/425 (41%), Positives = 277/425 (65%), Gaps = 17/425 (4%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
+VF++ P +KWG K + T + +AE+KALV ++ W V ++ I+S + DKK FGK
Sbjct: 94 QRVFLLHPDVKWGAKKQTMTRAELQVAEAKALVHTLMNWSVEETMIVSTKTPDKKLVFGK 153
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
GN ELL ++RG ++T VF++++ + +K L+ + + VFDR+ IV+ IF+ +AKT+
Sbjct: 154 GNFELLTEKIRGSPQITCVFLNIERMSPLTKKELKAAWGIEVFDRFTIVLHIFRCNAKTK 213
Query: 206 EARLQIAIAELPYLWTRYRTIEDATN---------MNITKGFLDSKRMVLMEREQKLKKA 256
EA+LQIA+AE+P L + + + M + F+ ++ VL E+E K+KKA
Sbjct: 214 EAKLQIALAEIPLLRSNLKNEIAQLDQQGGGSRYIMGSGETFMQIQQRVLKEKEIKIKKA 273
Query: 257 LNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTT 316
L KLK +R ++R+++++++ P ++V+GYTNCGKTTLIKALT D S+ PR+QLFATLD+T
Sbjct: 274 LEKLKKRRHLLRSQRKKRELPIISVMGYTNCGKTTLIKALTGDTSIQPRDQLFATLDITA 333
Query: 317 HEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQ 376
H G LP+R+ ++YVDTIGF+S +P L+E F TLED +D+IIHV D+S+P+ QK
Sbjct: 334 HSGSLPSRMNVVYVDTIGFLSQLPHDLIESFSATLEDVAYSDVIIHVRDISHPETDLQKA 393
Query: 377 HVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQD 436
V L++L L ++L+ VL V NKVD V E TE + ISA G GL +LKE++++
Sbjct: 394 SVLSVLKNLHLPNQLLDSVLEVHNKVDLVERYEP-TEPNAITISALFGHGLEKLKEEIEN 452
Query: 437 MILKATGRKNITMRVRSGGSEYQWLMKHTAVSN---IREDDTSAEHLLLDVVMTDVIMNK 493
+LKATG+K +T++++ G++ WL K V I E+ T+ + V++++ K
Sbjct: 453 AVLKATGKKLLTLKIKLEGAQLSWLYKEATVQEVDVIPENGTAN----VKVIISNSAYGK 508
Query: 494 FKHEF 498
++ F
Sbjct: 509 YRKLF 513
>gi|291401033|ref|XP_002716902.1| PREDICTED: pseudoautosomal GTP-binding protein-like protein-like
[Oryctolagus cuniculus]
Length = 514
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 176/426 (41%), Positives = 263/426 (61%), Gaps = 21/426 (4%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+V +V P +KWG + T ++ +AE+ ALV S+ GW VV + ++ + ++K FG+G
Sbjct: 94 RVCLVHPDVKWGAGKPQLTRAEWQVAEAAALVRSLDGWSVVLTLVVPTKTPERKLIFGRG 153
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
NLE L +RG A +T VF++++ + +K L+ + + VFDR+ IV+ IF+AHA+TRE
Sbjct: 154 NLERLTETIRGAADITCVFLNLERMAAPTKKELEAAWGIQVFDRFTIVLHIFRAHARTRE 213
Query: 207 ARLQIAIAELPYL----------WTRYRTIEDATNMNITKGFLDSKRMV----LMEREQK 252
ARLQ+A+AELP L W R R G +S R V L E+E
Sbjct: 214 ARLQVALAELPLLRSGLKSDITQWDRQRG-----GSRYILGSGESARQVQQRELREKEAG 268
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
++KAL +L+ +R+++R ++ R++ P V+VVGYTNCGKTTLI+ALT D ++ P+++LFATL
Sbjct: 269 IRKALERLRRKRQLLRQQRARRELPVVSVVGYTNCGKTTLIQALTGDQAMQPQDRLFATL 328
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
DVT H G LP+RL +LYVDT+GF+S +P LLE F TLED +D+I+HV DVS+P+
Sbjct: 329 DVTVHAGWLPSRLPVLYVDTVGFLSQLPHGLLESFTATLEDVAHSDLIVHVRDVSHPETE 388
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKE 432
QK V LQ L L +L+ +L V NKVD V PG + + +SA G GL +LK
Sbjct: 389 LQKASVLSALQGLHLPSSLLDSMLEVHNKVDLV-PGYSPSGPSAVAVSALLGHGLEELKA 447
Query: 433 KVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMN 492
++ IL+ATGR +T+RV G++ WL + V + A+ +DV+++D
Sbjct: 448 GLEAAILRATGRHMVTLRVGLQGAQLSWLHREATVQQV-HVVPGAQAADVDVIISDSAHR 506
Query: 493 KFKHEF 498
+F+ F
Sbjct: 507 RFRKLF 512
>gi|427794919|gb|JAA62911.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 501
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/418 (40%), Positives = 262/418 (62%), Gaps = 4/418 (0%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
H V +VQP IK G++++ +TT LAE+ AL+ ++ GW+ + + +K F
Sbjct: 80 HDVLIVQPRIKKGRRLRTDTTTALQLAEAVALLETLPGWKAAGRLTLKTDNDMRKLIFKS 139
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
GNLE ++ V+ + TA+F++ D++ Q LQ+ F++P++DRY +V+ IF+ HA+T+
Sbjct: 140 GNLERIRDSVK-EKSATAIFINFDIITGVQHAALQEFFRLPIYDRYTLVLNIFRNHARTK 198
Query: 206 EARLQIAIAELPYLWTRYRTIEDATNMNI---TKGFLDSKRMVLMEREQKLKKALNKLKG 262
EA+LQIA+AE+PY R + T N + + + ++ L+ RE L++ L +LK
Sbjct: 199 EAKLQIALAEIPYYRARIWHLHKGTGRNTFGTGQTYYERQQQQLLTREAALRRQLAELKE 258
Query: 263 QREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLP 322
+R ++R K+++ +FPTVAVVGYTN GKT+LIK LTDD L PR+QLFATLDVT H G L
Sbjct: 259 ERSLLRKKRRQLEFPTVAVVGYTNAGKTSLIKRLTDDSRLQPRDQLFATLDVTAHAGRLN 318
Query: 323 NRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETL 382
+LY+DT+GFIS+IPTTL+ F TLED + AD+++HV+D+S+PD Q+ +V ETL
Sbjct: 319 MLKCVLYMDTVGFISDIPTTLVASFASTLEDVVHADVVVHVLDLSHPDREAQRSNVLETL 378
Query: 383 QHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKAT 442
+ + K+L ++ VGNKVD +P + IS TGLA+L+ ++ +++ T
Sbjct: 379 DKMGVSHKLLNSMIEVGNKVDLLPSSVPENGRECIPISCIDSTGLAELQVVIEQRLIENT 438
Query: 443 GRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFIS 500
GR RV +GGSEY WL + + D + + ++DVV++ KFKH + S
Sbjct: 439 GRSVARFRVPTGGSEYSWLYREGTFISCVVDAHDSNYSIVDVVLSAAAKAKFKHLYGS 496
>gi|327268080|ref|XP_003218826.1| PREDICTED: putative GTP-binding protein 6-like [Anolis
carolinensis]
Length = 522
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 183/441 (41%), Positives = 284/441 (64%), Gaps = 22/441 (4%)
Query: 76 EAQTGALGTDHQ-VFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISL 134
E+ A+ HQ VF+V P +KWG + TT + LAE+ AL+++IQ W V+D I+S
Sbjct: 85 ESGLPAVPPGHQKVFIVHPAVKWGPGKPQLTTAELQLAEAVALINTIQNWTVLDKIILST 144
Query: 135 LSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIV 194
DKK FGKGN +LL +++G +++VFV+V+ L +K L+ ++V VFDRY +V
Sbjct: 145 KVPDKKFIFGKGNFQLLTEKIKGLPEISSVFVNVERLSPPTKKELEQAWEVQVFDRYSVV 204
Query: 195 IQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKG-----------FLDSKR 243
+ IF+ +A+T+EA+LQIA+AE+P L + R + ++ +G F++ +
Sbjct: 205 LHIFRCNAQTKEAKLQIALAEIPLLRSNIR--NEVAQLDQQRGGSRYIMGSGETFMELQL 262
Query: 244 MVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLV 303
+L E+E K++KAL +L+ +R ++R+++ +++FPTV+V+GYTNCGKTTLIKALT D L
Sbjct: 263 RLLKEKELKIRKALERLRRKRRLLRSQRMKREFPTVSVMGYTNCGKTTLIKALTGDAGLQ 322
Query: 304 PRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHV 363
P++QLFATLD+T H G LP+RL +LYVDTIGF+S +P L+E F TLED +D+I+HV
Sbjct: 323 PQDQLFATLDITAHAGSLPSRLTVLYVDTIGFLSQLPHDLVESFSATLEDVACSDLILHV 382
Query: 364 VDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATR 423
DVS+P+ QK+ V L++L L +L+ ++ V NKVD + G TE + ISA
Sbjct: 383 RDVSHPETNLQKESVLTVLRNLSLPSHLLKSIIEVHNKVDLI-DGHHPTEPNTIAISALL 441
Query: 424 GTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSN---IREDDTSAEHL 480
G GL +LKE+++ IL+ TG+ +T++V G++ WL K V + + ED T+
Sbjct: 442 GHGLEELKEEIEKKILEVTGKNILTIKVNLSGTQLSWLYKEATVQDVDVVPEDGTAN--- 498
Query: 481 LLDVVMTDVIMNKFKHEFISS 501
+ VV+++ + K+K F S
Sbjct: 499 -VKVVISNSALGKYKRLFPRS 518
>gi|270014756|gb|EFA11204.1| hypothetical protein TcasGA2_TC005168 [Tribolium castaneum]
Length = 430
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 165/375 (44%), Positives = 244/375 (65%), Gaps = 11/375 (2%)
Query: 84 TDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFF 143
+ +++QP+IKWG + + T L E+KALV+++ W + DS + L SFDKK+ F
Sbjct: 60 SGRNCYIIQPYIKWGPQKLQGITPIEQLDEAKALVNTLPSWNIQDSISVPLESFDKKTLF 119
Query: 144 GKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAK 203
G+L+ L++ +R ++ + AVFV++ LK Q L+ F VP+ DRY +V+ I K H
Sbjct: 120 KSGSLDKLRQIIRKNSTINAVFVNLGTLKKAQIVSLEREFGVPILDRYKVVMYILKLHVV 179
Query: 204 TREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQ 263
++ A+LQ+A+AEL YL + T +A N K + +++ REQKLK A+ +L+ +
Sbjct: 180 SKHAKLQVALAELYYL--QRSTFHEA---NFGKAEREKVKLMFQTREQKLKNAIKELRTE 234
Query: 264 REMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPN 323
R ++RNK+Q+ FP VAVVGYTN GKT+LIKALT ++ L P+NQLFATLDVT H G+LP+
Sbjct: 235 RALLRNKRQKIDFPVVAVVGYTNAGKTSLIKALTGEERLRPKNQLFATLDVTLHAGLLPS 294
Query: 324 RLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQ 383
+++LYVDT+GFIS+IPT L+E F TLEDA+LAD+I+HV D+S+ + +++HV TLQ
Sbjct: 295 GMKVLYVDTVGFISDIPTNLIECFVATLEDAVLADVILHVEDISSSFFEFKRKHVLATLQ 354
Query: 384 HLELEE---KILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
L +L V+ VGNK D VP + T+ L +S+ TGL L+ ++ IL+
Sbjct: 355 DLATNAGTGDVLNKVISVGNKCDLVP---KETDFGILKVSSKDDTGLDVLRMTLEKAILE 411
Query: 441 ATGRKNITMRVRSGG 455
T R I +RV GG
Sbjct: 412 NTNRAKIKIRVPVGG 426
>gi|326913699|ref|XP_003203172.1| PREDICTED: putative GTP-binding protein 6-like [Meleagris
gallopavo]
Length = 431
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 167/410 (40%), Positives = 271/410 (66%), Gaps = 19/410 (4%)
Query: 106 TRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVF 165
T + +AE+ ALV ++Q W V+D II + DKK FGKGN E L +++ VTAVF
Sbjct: 24 TTELQIAEAVALVDTLQNWTVLDKIIIPTKNPDKKFIFGKGNFEALTEKIKKLPHVTAVF 83
Query: 166 VSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRT 225
++V+ + +K L+D + V VFDRY +V+ IF+ +A+T+EA+LQIA+AE+P L + +T
Sbjct: 84 LNVERISSVTKKELEDAWGVKVFDRYTVVLHIFRCNARTKEAKLQIALAEIPLLRSNLKT 143
Query: 226 IEDATNMNITKG-----------FLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQ 274
+ ++++ +G F++++ +L E+E K++ AL KL+ +R ++R +++++
Sbjct: 144 --EVSHLDQQRGGSRYIMGSGETFMETQNRLLREKELKIRNALEKLRRKRSLLRTQRKKR 201
Query: 275 KFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIG 334
+FP ++V+GYTNCGKTTLIKALT + + PRNQLFATLD+T H G LP+R+ ++YVDTIG
Sbjct: 202 EFPIISVMGYTNCGKTTLIKALTGEAGIQPRNQLFATLDITAHAGYLPSRMAVIYVDTIG 261
Query: 335 FISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEH 394
F+S++P L+E F TLE+ +D+I+HV D+++P+ + QK V L++L L +LE
Sbjct: 262 FLSDLPHNLVESFSATLEEVAYSDLIVHVRDITHPETILQKASVLSVLKNLNLPSHLLES 321
Query: 395 VLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG 454
++ V NKVD + E TEE L ISA G GL +LKE+++ ILKATG+K +T+ V
Sbjct: 322 MVEVHNKVDLIESYEP-TEENALAISALHGHGLEELKEEIEKKILKATGKKILTITVNLQ 380
Query: 455 GSEYQWLMKHTAVS--NIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSR 502
G + WL K + V ++ DD +A + V++++ ++++ F +S+
Sbjct: 381 GPQLSWLYKESTVQEVDVMPDDATAR---VKVIISNSAFGRYRNLFPNSK 427
>gi|301786777|ref|XP_002928803.1| PREDICTED: putative GTP-binding protein 6-like [Ailuropoda
melanoleuca]
Length = 433
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 166/404 (41%), Positives = 257/404 (63%), Gaps = 15/404 (3%)
Query: 106 TRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVF 165
T ++ +AE +ALV ++ GW V ++ ++ + D K FGKG LE L ++RG +TAVF
Sbjct: 32 TAEWQVAEGEALVHTLDGWSVAETMVVPSNAPDGKLIFGKGTLEHLTEKIRGLPEITAVF 91
Query: 166 VSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRT 225
++V+ L +K L+ + V VFDR+ +V+ IF+ +A+T+EARLQ+A+AELP L + ++
Sbjct: 92 LNVERLATPTKKELEAAWGVQVFDRFTVVLHIFRCNARTKEARLQVALAELPLLRSHLKS 151
Query: 226 IEDATN---------MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
+ M + F+ ++ + E+E K++KAL +LK +R ++ +++RQ+F
Sbjct: 152 SMARPDGRGGGSRYIMGSGESFMQVQQRLFKEKEMKIRKALERLKKKRRLLGRQRRRQEF 211
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P ++VVGYTNCGKTTLIKALT DD + PR+QLFATLDVT H G LP+ + ++Y+DTIGF+
Sbjct: 212 PVISVVGYTNCGKTTLIKALTGDDGVQPRDQLFATLDVTAHAGWLPSCMAVIYMDTIGFL 271
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
S +P +L+E F TLED +D+I+HV DVS+P+ QK V L L L +L+ +L
Sbjct: 272 SQLPHSLIESFSATLEDMAHSDLIVHVRDVSHPETELQKASVLSALHGLCLPAPLLDSML 331
Query: 397 VVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGS 456
V NKVD V PG + +SA G GL +LK +++D +L+ATGR+ +T+RVR G+
Sbjct: 332 EVHNKVDLV-PGYSPPGPQAVAVSALLGHGLLELKARLEDAVLRATGRQVLTLRVRLVGA 390
Query: 457 EYQWLMKHTAVSNIREDDTSAEHLLLD--VVMTDVIMNKFKHEF 498
+ WL + + ++E D E + D VV++ KF+ F
Sbjct: 391 QLSWLHRE---ATVQEVDVVPEAGVADVKVVISSSAYGKFRKLF 431
>gi|209447119|ref|NP_001129312.1| GTP binding protein 6 (putative) [Rattus norvegicus]
gi|392352605|ref|XP_003751258.1| PREDICTED: putative GTP-binding protein 6-like [Rattus norvegicus]
Length = 513
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/425 (40%), Positives = 259/425 (60%), Gaps = 17/425 (4%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
+V V+ P +K +T ++ +AE+ ALV ++ GW V + ++S + + FGK
Sbjct: 83 QRVCVLHPDVKRPAGKTPRSTAEWQVAEAAALVRALPGWSVARTLVVSSAAPGSRQVFGK 142
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
GN L ++RG +T+VF++V+ + QK L+ + + VFDR+ +V+ IF+ +A+TR
Sbjct: 143 GNFRDLTEKIRGCQDITSVFLNVERMTPQTQKELETAWGLRVFDRFTLVLHIFRCNARTR 202
Query: 206 EARLQIAIAELPYLWTRYRTIEDATN-----------MNITKGFLDSKRMVLMEREQKLK 254
EAR+Q+A+AE+P L R D+ M + F + + L +RE +L+
Sbjct: 203 EARMQLALAEIPLL--RSSVSGDSEQQDQQGWGSRYIMGSGESFSELRARALRDRELRLR 260
Query: 255 KALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDV 314
+ L +L+ +R +MR ++ R++FP V+VVGYTNCGKTTLI+ALT + +L PR+Q FATLDV
Sbjct: 261 RVLERLRDKRRLMRKERVRREFPVVSVVGYTNCGKTTLIRALTGEATLQPRDQPFATLDV 320
Query: 315 TTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQ 374
T HEG LP+RLR+LYVDTIGF+S +P +L+ F TLED +D+++HV DVS+PD Q
Sbjct: 321 TVHEGRLPSRLRVLYVDTIGFLSQLPHSLIHAFSATLEDVAYSDVLVHVTDVSHPDAELQ 380
Query: 375 KQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKV 434
K V TL+ L L +LE + V +KVD V PG L +SA G GL +LK +
Sbjct: 381 KATVLSTLRGLGLRPALLESAVEVHSKVDLV-PGHTTPCSGALAVSAVSGRGLDELKAAL 439
Query: 435 QDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIRE-DDTSAEHLLLDVVMTDVIMNK 493
+ +L+ATGR+ +T+RVR GG + WL V ++E + A H + VV+T +
Sbjct: 440 EASVLRATGRQLLTIRVRLGGPQLGWLYNEAVVQQVQELPEGGAAH--VTVVITQAAYGR 497
Query: 494 FKHEF 498
F+ F
Sbjct: 498 FQKLF 502
>gi|148688100|gb|EDL20047.1| GTP binding protein 6 (putative), isoform CRA_b [Mus musculus]
Length = 514
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/426 (38%), Positives = 253/426 (59%), Gaps = 19/426 (4%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
+V V+ P +K K +T ++ +AE+ ALV ++ GW V + ++ + + FGK
Sbjct: 85 QRVCVLHPDVKRPAGKKPRSTAEWQVAEAAALVRALPGWSVASTLVVPSAAPGSRLVFGK 144
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
GN + + +++G +T+VF++V+ + +K L+ + + VFDR+ +V+ IF+ +A+TR
Sbjct: 145 GNFQDVTEKIKGCQDITSVFLNVERMAPPTKKELETAWGLRVFDRFTLVLHIFRCNARTR 204
Query: 206 EARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKG--- 262
EAR+Q+A+AE+P L ++ + +G+ M E +L+ + +
Sbjct: 205 EARMQLALAEIPLL---RSSVNTDSGQQDQQGWGSRYIMGSGESPTELRARALRDRELRL 261
Query: 263 ---------QREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLD 313
+R +MR ++ RQ+FP V+VVGYTNCGKTTLI+ALT + +L PR+Q FATLD
Sbjct: 262 RRVLERLRDKRRLMRKERVRQEFPVVSVVGYTNCGKTTLIQALTGEAALQPRDQPFATLD 321
Query: 314 VTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQ 373
VT H G+LP+RLRILYVDTIGF+S +P +L+ F TLED +D+++HV DVS+PD
Sbjct: 322 VTVHAGLLPSRLRILYVDTIGFLSQLPHSLIHAFSATLEDVAYSDVLVHVTDVSHPDAEL 381
Query: 374 QKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEK 433
QK V TL+ L L +LE L V +KVD V PG L +SA G GL +LK
Sbjct: 382 QKATVLSTLRGLHLPPALLESALEVHSKVDLV-PGYTPPCSGALAVSAISGRGLDELKAA 440
Query: 434 VQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIRE-DDTSAEHLLLDVVMTDVIMN 492
++ +L+ATGR+ +T+ VR GG + WL K V ++E + A H + VV+T
Sbjct: 441 LEASVLRATGRQVLTLCVRLGGPQLGWLYKEAVVQQVQELPEGDAAH--VTVVITQAAYG 498
Query: 493 KFKHEF 498
+F+ F
Sbjct: 499 RFRKLF 504
>gi|165972313|ref|NP_660129.2| putative GTP-binding protein 6 [Mus musculus]
gi|74201216|dbj|BAE26076.1| unnamed protein product [Mus musculus]
Length = 514
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 162/426 (38%), Positives = 253/426 (59%), Gaps = 19/426 (4%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
+V V+ P +K K +T ++ +AE+ ALV ++ GW V + ++ + + FGK
Sbjct: 85 QRVCVLHPDVKRPAGKKPRSTAEWQVAEAAALVRALPGWSVASTLVVPSAAPGSRLVFGK 144
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
GN + + +++G +T+VF++V+ + +K L+ + + VFDR+ +V+ IF+ +A+TR
Sbjct: 145 GNFQDVTEKIKGCQDITSVFLNVERMAPPTKKELESAWGLRVFDRFTLVLHIFRCNARTR 204
Query: 206 EARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKG--- 262
EAR+Q+A+AE+P L ++ + +G+ M E +L+ + +
Sbjct: 205 EARMQLALAEIPLL---RSSVNTDSGQQDQQGWGSRYIMGSGESPTELRARALRDRELRL 261
Query: 263 ---------QREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLD 313
+R +MR ++ R++FP V+VVGYTNCGKTTLI+ALT + +L PR+Q FATLD
Sbjct: 262 RRVLERLRDKRRLMRKERVRREFPVVSVVGYTNCGKTTLIQALTGEAALQPRDQPFATLD 321
Query: 314 VTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQ 373
VT H G+LP+RLRILYVDTIGF+S +P +L+ F TLED +D+++HV DVS+PD
Sbjct: 322 VTVHAGLLPSRLRILYVDTIGFLSQLPHSLIHAFSATLEDVAYSDVLVHVTDVSHPDAEL 381
Query: 374 QKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEK 433
QK V TL+ L L +LE L V +KVD V PG L +SA G GL +LK
Sbjct: 382 QKATVLSTLRGLHLPPALLESALEVHSKVDLV-PGYTPPCSGALAVSAISGRGLDELKAA 440
Query: 434 VQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIRE-DDTSAEHLLLDVVMTDVIMN 492
++ +L+ATGR+ +T+ VR GG + WL K V ++E + A H + VV+T
Sbjct: 441 LEASVLRATGRQVLTLCVRLGGPQLGWLYKEAVVQQVQELPEGDAAH--VTVVITQAAYG 498
Query: 493 KFKHEF 498
+F+ F
Sbjct: 499 RFRKLF 504
>gi|123797055|sp|Q3U6U5.1|GTPB6_MOUSE RecName: Full=Putative GTP-binding protein 6
gi|74212628|dbj|BAE31052.1| unnamed protein product [Mus musculus]
gi|74225416|dbj|BAE31629.1| unnamed protein product [Mus musculus]
Length = 514
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/426 (38%), Positives = 252/426 (59%), Gaps = 19/426 (4%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
+V V+ P +K K +T ++ +AE+ ALV ++ GW V + ++ + + FGK
Sbjct: 85 QRVCVLHPDVKRPAGKKPRSTAEWQVAEAAALVRALPGWSVASTLVVPSAAPGSRLVFGK 144
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
GN + + +++G +T+VF++V+ + +K L+ + + VFDR+ +V+ IF+ +A+TR
Sbjct: 145 GNFQDVTEKIKGCQDITSVFLNVERMAPPTKKELESAWGLRVFDRFTLVLHIFRCNARTR 204
Query: 206 EARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKG--- 262
EAR+Q+A+AE+P L ++ + +G+ M E +L+ + +
Sbjct: 205 EARMQLALAEIPLL---RSSVNTDSGQQDQQGWGSRYIMGSGESPTELRARALRDRELRL 261
Query: 263 ---------QREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLD 313
+R +MR ++ R++FP V+VVGYTNCGKTTLI+ALT + +L PR+Q FATLD
Sbjct: 262 RRVLERLRDKRRLMRKERVRREFPVVSVVGYTNCGKTTLIQALTGEAALQPRDQPFATLD 321
Query: 314 VTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQ 373
VT H G+LP+RLRILYVDTIGF+S +P L+ F TLED +D+++HV DVS+PD
Sbjct: 322 VTVHAGLLPSRLRILYVDTIGFLSQLPHNLIHAFSATLEDVAYSDVLVHVTDVSHPDAEL 381
Query: 374 QKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEK 433
QK V TL+ L L +LE L V +KVD V PG L +SA G GL +LK
Sbjct: 382 QKATVLSTLRGLHLPPALLESALEVHSKVDLV-PGYTPPCSGALAVSAISGRGLDELKAA 440
Query: 434 VQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIRE-DDTSAEHLLLDVVMTDVIMN 492
++ +L+ATGR+ +T+ VR GG + WL K V ++E + A H + VV+T
Sbjct: 441 LEASVLRATGRQVLTLCVRLGGPQLGWLYKEAVVQQVQELPEGDAAH--VTVVITQAAYG 498
Query: 493 KFKHEF 498
+F+ F
Sbjct: 499 RFRKLF 504
>gi|74197107|dbj|BAE35103.1| unnamed protein product [Mus musculus]
Length = 513
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/426 (38%), Positives = 252/426 (59%), Gaps = 19/426 (4%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
+V V+ P +K K +T ++ +AE+ ALV ++ GW V + ++ + + FGK
Sbjct: 84 QRVCVLHPDVKRPAGKKPRSTAEWQVAEAAALVRALPGWSVASTLVVPSAAPGSRLVFGK 143
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
GN + + +++G +T+VF++V+ + +K L+ + + VFDR+ +V+ IF+ +A+TR
Sbjct: 144 GNFQDVTEKIKGCQDITSVFLNVERMAPPTKKELESAWGLRVFDRFTLVLHIFRCNARTR 203
Query: 206 EARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKG--- 262
EAR+Q+A+AE+P L ++ + +G+ M E +L+ + +
Sbjct: 204 EARMQLALAEIPLL---RSSVNTDSGQQDQQGWGSRYIMGSGESPTELRARALRDRELRL 260
Query: 263 ---------QREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLD 313
+R +MR ++ R++FP V+VVGYTNCGKTTLI+ALT + +L PR+Q FATLD
Sbjct: 261 RRVLERLRDKRRLMRKERVRREFPVVSVVGYTNCGKTTLIQALTGEAALQPRDQPFATLD 320
Query: 314 VTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQ 373
VT H G+LP+RLRILYVDTIGF+S +P +L+ F TLED +D+++HV DVS+PD
Sbjct: 321 VTVHAGLLPSRLRILYVDTIGFLSQLPHSLIHAFSATLEDVAYSDVLVHVTDVSHPDAEL 380
Query: 374 QKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEK 433
QK V TL+ L L +LE L V +KVD V PG L +SA G GL +LK
Sbjct: 381 QKATVLSTLRGLHLPPALLESALEVHSKVDLV-PGYTPPCSGALAVSAISGRGLDELKAA 439
Query: 434 VQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIRE-DDTSAEHLLLDVVMTDVIMN 492
++ +L+ATGR+ +T+ VR GG + WL K V ++E + A H + VV+T
Sbjct: 440 LEASVLRATGRQVLTLCVRLGGPQLGWLYKEAVVQQVQELPEGDAAH--VTVVITQAAYG 497
Query: 493 KFKHEF 498
+F F
Sbjct: 498 RFGKLF 503
>gi|443732692|gb|ELU17319.1| hypothetical protein CAPTEDRAFT_93416, partial [Capitella teleta]
Length = 417
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/414 (40%), Positives = 251/414 (60%), Gaps = 28/414 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E+ AL+ ++ GW V + S K FGKG E + R +R TAVF+++D+
Sbjct: 12 LDEAIALIDALPGWNVAGTVRFSSSEGGSKHVFGKGAFEEIHRDIRRCQNTTAVFLTLDM 71
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
L Q ++Q + +PV+DRY IV+QIFK A+T EA+LQ+A+AE+P+ +R
Sbjct: 72 LNGLQLSVIQKEWGLPVYDRYTIVLQIFKHRAQTMEAKLQVALAEIPFYKSRL------- 124
Query: 231 NMNITKGFLDSKRMVLM------EREQKLKK------------ALNKLKGQREMMRNKKQ 272
+ + KG LD +R L E+E ++K AL+KLK QR+ +R +++
Sbjct: 125 -VGVHKGTLDQQRGSLGTIGGGGEKEIEVKHRSLQDKELKLKKALSKLKAQRKHLREERK 183
Query: 273 RQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDT 332
++ P VAVVGYTN GKT+LIKALT SL P++Q+FATLDVT H G+L NR+++L+ DT
Sbjct: 184 KKDLPIVAVVGYTNAGKTSLIKALTGSKSLEPQDQVFATLDVTVHAGLLCNRMKVLFTDT 243
Query: 333 IGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKIL 392
+GFIS++PT L+E F TLED AD I+H+ DVS+P+ ++QKQ V ETL+ L+L +
Sbjct: 244 VGFISDVPTALIESFASTLEDIRNADTIVHIRDVSHPETVEQKQVVMETLRQLQLPPSLT 303
Query: 393 EHVLVVGNKVDAVP--PGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMR 450
++V+ V NK+D +P E++ +E +S G GL + ++ D +++ATGR MR
Sbjct: 304 QNVIEVCNKIDLLPQDEAEKLCDEDGFAVSVLNGDGLDDVVRRIHDQVIQATGRTERRMR 363
Query: 451 VRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSRKR 504
+ G WL K V++++ D +E L + +MTD KFK F S RK+
Sbjct: 364 IPMNGEHLNWLYKEADVTDVQPADGDSEKLQVCALMTDATYAKFKAAFKSKRKQ 417
>gi|148688102|gb|EDL20049.1| GTP binding protein 6 (putative), isoform CRA_d [Mus musculus]
Length = 451
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 158/406 (38%), Positives = 245/406 (60%), Gaps = 19/406 (4%)
Query: 106 TRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVF 165
T ++ +AE+ ALV ++ GW V + ++ + + FGKGN + + +++G +T+VF
Sbjct: 42 TAEWQVAEAAALVRALPGWSVASTLVVPSAAPGSRLVFGKGNFQDVTEKIKGCQDITSVF 101
Query: 166 VSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRT 225
++V+ + +K L+ + + VFDR+ +V+ IF+ +A+TREAR+Q+A+AE+P L + +
Sbjct: 102 LNVERMAPPTKKELETAWGLRVFDRFTLVLHIFRCNARTREARMQLALAEIPLLRS---S 158
Query: 226 IEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKG------------QREMMRNKKQR 273
+ + +G+ M E +L+ + + +R +MR ++ R
Sbjct: 159 VNTDSGQQDQQGWGSRYIMGSGESPTELRARALRDRELRLRRVLERLRDKRRLMRKERVR 218
Query: 274 QKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTI 333
Q+FP V+VVGYTNCGKTTLI+ALT + +L PR+Q FATLDVT H G+LP+RLRILYVDTI
Sbjct: 219 QEFPVVSVVGYTNCGKTTLIQALTGEAALQPRDQPFATLDVTVHAGLLPSRLRILYVDTI 278
Query: 334 GFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILE 393
GF+S +P +L+ F TLED +D+++HV DVS+PD QK V TL+ L L +LE
Sbjct: 279 GFLSQLPHSLIHAFSATLEDVAYSDVLVHVTDVSHPDAELQKATVLSTLRGLHLPPALLE 338
Query: 394 HVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRS 453
L V +KVD V PG L +SA G GL +LK ++ +L+ATGR+ +T+ VR
Sbjct: 339 SALEVHSKVDLV-PGYTPPCSGALAVSAISGRGLDELKAALEASVLRATGRQVLTLCVRL 397
Query: 454 GGSEYQWLMKHTAVSNIRE-DDTSAEHLLLDVVMTDVIMNKFKHEF 498
GG + WL K V ++E + A H + VV+T +F+ F
Sbjct: 398 GGPQLGWLYKEAVVQQVQELPEGDAAH--VTVVITQAAYGRFRKLF 441
>gi|449275736|gb|EMC84504.1| Putative GTP-binding protein 6, partial [Columba livia]
Length = 412
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 165/416 (39%), Positives = 268/416 (64%), Gaps = 30/416 (7%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
+ +AE+ ALV ++Q W V+D II + DKK FGKGNL++L +++ VTAVF++
Sbjct: 2 ELQIAEAVALVDTLQNWTVLDKIIIPTKNPDKKFIFGKGNLQVLTEKIKKLPHVTAVFLN 61
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIE 227
V+ + +K L+D + V VFDRY +V+ IF+ +A+T+EA+LQIA+AE+P L + +
Sbjct: 62 VERISSLTKKELEDAWGVKVFDRYTVVLHIFRCNARTKEAKLQIALAEIPLLRSNLKN-- 119
Query: 228 DATNMNITKG-----------FLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
+ ++ +G F++++ +L ERE K++ AL+KL+ +R ++R ++++++F
Sbjct: 120 EVAQLDQQRGGSRYIMGSGETFMETQNRILKERELKIRNALDKLRRKRSLLRTQRKKREF 179
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P ++V+GYTNCGKTTLIKALT ++ L PR+QLFATLD+T H G LP+R+ ++YVDTIGF+
Sbjct: 180 PVISVMGYTNCGKTTLIKALTGEEGLQPRDQLFATLDITAHAGYLPSRMAVIYVDTIGFL 239
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
+++P L+E F TLE+ +D+I+HV D+++P+ QK V L++L L +L+ ++
Sbjct: 240 TDLPHNLVESFSATLEEVAYSDLIVHVRDITHPETNLQKATVLSVLKNLNLPSHLLDSMV 299
Query: 397 VVGNKVDAVPPGERV--TEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG 454
V NKVD + ER EE L ISA G GL +LKE+++ IL ATG+K +T+ V
Sbjct: 300 EVHNKVDLI---ERYKPAEENALAISALHGHGLEELKEEIEKKILTATGKKILTVNVNLE 356
Query: 455 GSEYQ-----WLMKHTAVSNIR---EDDTSAEHLLLDVVMTDVIMNKFKHEFISSR 502
GS+ + WL K V + ED T+ + V++ + ++K+ F +S+
Sbjct: 357 GSQLRNNFELWLYKEATVQEVEVMPEDGTAR----VKVIIGNSAFGRYKNLFPNSK 408
>gi|410988016|ref|XP_004000285.1| PREDICTED: putative GTP-binding protein 6, partial [Felis catus]
Length = 671
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 157/404 (38%), Positives = 255/404 (63%), Gaps = 14/404 (3%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D +AE+++LV ++ W VV+ ++ + D K FG+G L L ++R +TAVF++
Sbjct: 68 DRQVAEAESLVHTLDRWSVVERMVVPARTPDGKVAFGRGTLRHLTEKIRALPEITAVFLN 127
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIE 227
V+ + +K L+ + V VFDR+ +V+ IF+ +A+T+EARLQ+A+AELP L +
Sbjct: 128 VERMAPPTKKELEAAWGVQVFDRFTVVLSIFRCNARTKEARLQVALAELPLLRAHLSSTA 187
Query: 228 --DATN------MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
D M + + +R +L ++E ++KAL++L+ +R ++ +++R++FP V
Sbjct: 188 RLDGRGGGSRYIMGSGESPVQVQRRLLKDKELNIRKALDRLREKRRLLGRQRRRREFPVV 247
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
++VGYTNCGKTTLIKALT DD++ P+++LFATLDVT H G LP+R+ ++Y+DT+GF+S +
Sbjct: 248 SMVGYTNCGKTTLIKALTGDDAVRPQDRLFATLDVTAHAGWLPSRVAVIYMDTVGFLSQL 307
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
P +L+E F TLED +D+++HV DVS+P+ QK V L+ L L +L+ VL V
Sbjct: 308 PHSLIESFSATLEDVAHSDLVVHVRDVSHPETELQKATVLAALRGLRLPAPLLDSVLEVH 367
Query: 400 NKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQ 459
NKVD V PG + + +SA G GL +L+ +++D +L+ATGR+ +T+RVR G++
Sbjct: 368 NKVDLV-PGYSPSGSQAVAVSALLGHGLPELRARLEDAVLRATGRQVLTLRVRLAGAQLS 426
Query: 460 WLMKHTAVSNIREDDTSAEHLLLD--VVMTDVIMNKFKHEFISS 501
WL + V ++ D E D VV++ +KF+ F S
Sbjct: 427 WLHQEATVLDV---DVIPEAGAADVRVVISSSAYSKFRKLFPES 467
>gi|444519098|gb|ELV12580.1| Serine/threonine-protein phosphatase 2A regulatory subunit B''
subunit beta, partial [Tupaia chinensis]
Length = 820
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/360 (43%), Positives = 234/360 (65%), Gaps = 20/360 (5%)
Query: 98 GKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRG 157
G+ + ++ +AE+ ALV ++ GW VV + ++ + D K FGKG+LE L ++RG
Sbjct: 352 GRDQEWRIPAEWQVAEATALVHTLAGWSVVQTMVVPTRTPDSKLVFGKGSLEHLTGKIRG 411
Query: 158 DARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELP 217
+TAVF++V+ + +K L+ + V VFDR+ IV+ IF+ +A+TREARLQ+A+AE+P
Sbjct: 412 SPEITAVFLNVERMAAPTKKELEAAWGVEVFDRFTIVLHIFRCNARTREARLQVALAEIP 471
Query: 218 YLWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
L R L E+E K+++AL +L+ +R ++R ++ R++ P
Sbjct: 472 LL-------------------RGVLRRRLKEKELKIQRALERLRAKRRVLRRERARRELP 512
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
T+AVVGYTNCGKTTLI+ALT D + PR+QLFATLDVT H G LP+R+ ++YVDT+GF+S
Sbjct: 513 TIAVVGYTNCGKTTLIRALTGDPAARPRDQLFATLDVTAHAGSLPSRMTVVYVDTVGFLS 572
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
+P L+E F TLED +D+I+HV DVS+P+ QK V L+ L L +L+ VL
Sbjct: 573 QLPHGLVEAFSATLEDVAHSDLILHVRDVSHPEAELQKASVLGALRGLRLPPTLLDSVLE 632
Query: 398 VGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSE 457
V NKVD + PG E L +SA +G GL +LK ++++ +L+ATGR+ +T+RVR G++
Sbjct: 633 VHNKVDLL-PGYSPPEPGVLAVSALQGCGLQELKARLEEEVLRATGRRVLTLRVRLAGAQ 691
>gi|195997495|ref|XP_002108616.1| hypothetical protein TRIADDRAFT_18641 [Trichoplax adhaerens]
gi|190589392|gb|EDV29414.1| hypothetical protein TRIADDRAFT_18641 [Trichoplax adhaerens]
Length = 436
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/426 (37%), Positives = 270/426 (63%), Gaps = 18/426 (4%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
QV +V P IKWG+ +T +AE+ AL+ +++G +VV +T+ SL DKK+FFGKG
Sbjct: 13 QVVIVHPNIKWGRNRDTLSTPQLRVAEAVALMDTLKG-KVVATTVESLKIEDKKTFFGKG 71
Query: 147 N---LELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAK 203
L L +++ +VTAVF++ L+ +Q++ LQ L+ +PV+DRY IV+QIFK HA+
Sbjct: 72 KTGELCNLMNKLKQKHQVTAVFLNTTQLQANQRQTLQKLWSLPVYDRYGIVLQIFKRHAR 131
Query: 204 TREARLQIAIAELPYLWTRYRTIEDATNMNITKGFL--------DSKRMVLMEREQKLKK 255
T+EA++Q+ +A L YL ++ +A +++ +G L + R L + ++L +
Sbjct: 132 TQEAKIQVELASLKYLRSQLSFTVEAYDLD--RGHLGRAGESGQEIGRRALEYKYRQLSR 189
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L ++ +R +R K+QR + PTVAV+GYTN GKTTLIKALT + S++P+++LFATLD T
Sbjct: 190 KLKDIRQKRATVRLKRQRNEIPTVAVLGYTNAGKTTLIKALTGEKSMIPKDKLFATLDTT 249
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
+ G L + +ILY+DTIGFIS++P LLE F TLED + AD+++H+ D+S+P+ +QK
Sbjct: 250 VYSGQLISGFQILYIDTIGFISDLPHDLLESFSATLEDVINADLLLHIRDISHPETEKQK 309
Query: 376 QHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER--VTEEYD-LLISATRGTGLAQLKE 432
V L+ L L LE+++ V NK+D + + T++++ + +SAT+ L +
Sbjct: 310 ASVLNVLRDLYLPRTALENMIEVHNKIDLIEDYQSNLSTDDHNAVAVSATKKENFELLSQ 369
Query: 433 KVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMN 492
+++ ++K TG++ +++ +GG + WL + VS++ + + L++ +M++ +
Sbjct: 370 NIENGLMKTTGKQFYKLQIPNGGQQLSWLYREANVSDLVPSK-NGKSLIVKCIMSNGVYR 428
Query: 493 KFKHEF 498
KF +F
Sbjct: 429 KFCSKF 434
>gi|426258651|ref|XP_004022922.1| PREDICTED: putative GTP-binding protein 6 [Ovis aries]
Length = 517
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/395 (41%), Positives = 245/395 (62%), Gaps = 10/395 (2%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
++ +AE++ALV ++ GW VV + ++ + DKK FG+G LE L ++RG +TAVF++
Sbjct: 127 EWQVAEARALVCTLDGWSVVATMVVPTKTPDKKLIFGRGTLEQLTERIRGSPEITAVFLN 186
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFK--AHAKTREARLQIAIAELPYLWTRYRT 225
V+ L +K L+ + VPVFDR+ +V+ IF+ A A+ R + +L R R+
Sbjct: 187 VERLATPTKKDLEAAWCVPVFDRFTLVLHIFRCNACAQVRAGPGSHVKSNAAHLGGRGRS 246
Query: 226 IEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYT 285
M + FL ++ +L +RE K++KAL +L+ +R ++ +++R++FP V+VVGYT
Sbjct: 247 --SRYTMGSGESFLQVQQRLLRDRETKIQKALERLRRKRRLLGQQRRRREFPVVSVVGYT 304
Query: 286 NCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLE 345
NCGKTTLIKALT D ++ PR+QLFATLDVT H G LP+ L +LY+DTIGF+S +P +L+E
Sbjct: 305 NCGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGRLPSALTVLYMDTIGFLSQLPHSLVE 364
Query: 346 PFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV 405
F TL+D +D+I+HV DVS+P+ QK V L L L + +LE ++ V NKVD V
Sbjct: 365 SFSATLQDVAHSDLIVHVRDVSHPETELQKASVLSALGGLGLPDALLESMVEVHNKVDLV 424
Query: 406 PPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHT 465
PG E L +SA G GL +L +V+D IL+ATGR+ +T+RVR G WL +
Sbjct: 425 -PGYTPVEPDVLAVSALLGLGLDELMARVEDAILRATGRRTLTLRVRLAGXXXSWLHQEA 483
Query: 466 AVSNIREDDTSAEHLLLD--VVMTDVIMNKFKHEF 498
V + D E D V+++D +F+ F
Sbjct: 484 TVQAV---DVIPEAGAADVKVIISDSAYGRFQKLF 515
>gi|17826711|emb|CAC82171.1| putative GTP binding protein [Mus musculus]
Length = 399
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/395 (38%), Positives = 237/395 (60%), Gaps = 19/395 (4%)
Query: 117 LVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQ 176
LV ++ GW V + ++ + + FGKGN + + +++G +T+VF++V+ + +
Sbjct: 1 LVRALPGWSVASTLVVPSAAPGSRLVFGKGNFQDVTEKIKGCQDITSVFLNVERMAPPTK 60
Query: 177 KMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITK 236
K L+ + + VFDR+ +V+ IF+ +A+TREAR+Q+A+AE+P L + ++ + +
Sbjct: 61 KELESAWGLRVFDRFTLVLHIFRCNARTREARMQLALAEIPLLRS---SVNTDSGQQDQQ 117
Query: 237 GFLDSKRMVLMEREQKLKKALNKLKG------------QREMMRNKKQRQKFPTVAVVGY 284
G+ M E +L+ + + +R +MR ++ R++FP V+VVGY
Sbjct: 118 GWGSRYIMGSGESPTELRARALRDRELRLRRVLERLRDKRRLMRKERVRREFPVVSVVGY 177
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
TNCGKTTLI+ALT + +L PR+Q FATLDVT H G+LP+RLRILYVDTIGF+S +P +L+
Sbjct: 178 TNCGKTTLIQALTGEAALQPRDQPFATLDVTVHAGLLPSRLRILYVDTIGFLSQLPHSLI 237
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA 404
F TLED +D+++HV DVS+PD QK V TL+ L L +LE L V +KVD
Sbjct: 238 HAFSATLEDVAYSDVLVHVTDVSHPDAELQKATVLSTLRGLHLPPALLESALEVHSKVDL 297
Query: 405 VPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKH 464
V PG L +SA G GL +LK ++ +L+ATGR+ +T+ VR GG + WL K
Sbjct: 298 V-PGYTPPCSGALAVSAISGRGLDELKAALEASVLRATGRQVLTLCVRLGGPQLGWLYKE 356
Query: 465 TAVSNIRE-DDTSAEHLLLDVVMTDVIMNKFKHEF 498
V ++E + A H + VV+T +F+ F
Sbjct: 357 AVVQQVQELPEGDAAH--VTVVITQAAYGRFRKLF 389
>gi|296236808|ref|XP_002763488.1| PREDICTED: putative GTP-binding protein 6, partial [Callithrix
jacchus]
Length = 354
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 227/358 (63%), Gaps = 19/358 (5%)
Query: 154 QVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAI 213
++R +T VF++V+ + +K L+ + + VFDR+ +V+ IF+ +A+T EARLQ+A+
Sbjct: 1 RIRRSPDITCVFLNVERMAAPTKKELEAAWGLEVFDRFTVVLHIFRCNARTEEARLQVAL 60
Query: 214 AELPYLWTRYRTIEDATN-----------MNITKGFLDSKRMVLMEREQKLKKALNKLKG 262
AE+P L R D + M + F+ ++ +L E+E K++KAL+ L+
Sbjct: 61 AEIPLL--RSNLQRDVAHLHRGGSGSRYIMGSGESFMQLQQRLLKEKEAKIRKALDGLRK 118
Query: 263 QREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLP 322
+R ++R ++ R++FP V+VVGYTNCGKTTLIKALT D +L PR+QLFATLDVT H G LP
Sbjct: 119 KRHLLRRQRTRREFPVVSVVGYTNCGKTTLIKALTGDAALQPRDQLFATLDVTAHAGTLP 178
Query: 323 NRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETL 382
+RL +LYVDTIGF+S +P L+E F TLED +D+I+HV DVS+P+ QK V TL
Sbjct: 179 SRLTVLYVDTIGFLSQLPHGLIESFSATLEDVAHSDLILHVRDVSHPEAELQKASVVSTL 238
Query: 383 QHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKAT 442
+ L L +L+ +L V NKVD V PG TE + +SA G GL +LK ++ +LKAT
Sbjct: 239 RGLRLPAPLLDSMLEVHNKVDLV-PGYHATEPNVVPVSALLGHGLQELKAELDAAVLKAT 297
Query: 443 GRKNITMRVRSGGSEYQWLMKHTAVS--NIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
GR+ +T+RVR G++ WL + V ++ D +A+ + VV++ KF+ F
Sbjct: 298 GRQVLTLRVRLAGAQLSWLHEEATVQQVDVIPQDGAAD---VRVVISHSAYGKFRKLF 352
>gi|391332879|ref|XP_003740856.1| PREDICTED: putative GTP-binding protein 6-like [Metaseiulus
occidentalis]
Length = 490
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 161/429 (37%), Positives = 248/429 (57%), Gaps = 31/429 (7%)
Query: 87 QVFVVQPFIK---WGKKMKRNTTRDFMLAESKALVSSIQG-WRVVDSTIISLLSFDKKSF 142
+ +VQP K TT + L E++ALVS+++ RV ++ +S S KK F
Sbjct: 67 HILLVQPIYKNAFASSNYNSKTTPELQLQEAQALVSTMESRLRVCETLCLSTKSERKKLF 126
Query: 143 FGKGNLELLKRQV----RGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIF 198
FGKGN L +V R VT VF++V+ L QQ L+ V V+DRYM+V+QIF
Sbjct: 127 FGKGNFRKLLERVAYNERKHGNVT-VFLNVNTLTPFQQYELRLALGVDVYDRYMLVLQIF 185
Query: 199 KAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKRMV--LMEREQKLKKA 256
K HA+++EA+LQ ++AE+PY GF S +M+ L +RE L++
Sbjct: 186 KHHARSKEAKLQTSLAEIPYFRA-------------AMGFHGSDQMLVQLGQREVALRQE 232
Query: 257 LNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTT 316
L LK R ++R +++R + P AVVGYTN GKT+LIK LTD +L P++QLFATLDVT
Sbjct: 233 LENLKEHRALLRQERRRMEVPVAAVVGYTNAGKTSLIKKLTDSRTLQPKDQLFATLDVTC 292
Query: 317 HEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQ 376
H LP ++LYVDT+GFIS+IPT L+ F+ TLEDA+L+D IIH+ D+S+PD Q +
Sbjct: 293 HPSRLPKLGKVLYVDTVGFISDIPTQLIGSFRATLEDALLSDCIIHIYDLSHPDLENQCE 352
Query: 377 HVDETLQHLELEEKILEHVLVVGNKVDAVP-PGERVTEEYDLL-----ISATRGTGLAQL 430
V +TL+ +E +++E ++ +GNKVD + P ++ +L ISA G+
Sbjct: 353 IVMKTLEEIETPRRLVESIVHLGNKVDLLSDPDTAISRAQRILGSCIPISAVTAAGIRDA 412
Query: 431 KEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHT-AVSNIREDDTSAEHLLLDVVMTDV 489
E ++ +L+ + R + +R R+GG EY + + + V + D + +++V ++
Sbjct: 413 LEVIEGTLLENSNRTRLKIRCRTGGPEYAQIYRRSDTVLQLTPDSSDENFSIMEVTVSPA 472
Query: 490 IMNKFKHEF 498
+ + EF
Sbjct: 473 NQQRLRAEF 481
>gi|431902171|gb|ELK08699.1| Putative GTP-binding protein 6 [Pteropus alecto]
Length = 431
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/332 (42%), Positives = 214/332 (64%), Gaps = 13/332 (3%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
+V +V P +KWG T ++ +AE+KALV ++ W VV++ ++ + DKK F K
Sbjct: 101 QRVCLVHPEVKWGPAKPLRTRAEWQVAEAKALVHTLDSWSVVETVVVPTKTPDKKLIFSK 160
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
G LE L ++RG A +TAVF++V+ + +K L+ + V VFDR+ +V+ IF+ +A+TR
Sbjct: 161 GALEHLTEKIRGLAEITAVFLNVERMSAPTKKELEAAWGVQVFDRFTVVLHIFRCNARTR 220
Query: 206 EARLQIAIAELPYLWTRYRTIEDATNMNITKG-----------FLDSKRMVLMEREQKLK 254
EARLQ+A+AELP L R D ++ G F+ ++ +L E+E K++
Sbjct: 221 EARLQVALAELPVL--RANLKNDVGRLDGRGGGSRYIMGSGESFMQVQQRLLKEKEMKIR 278
Query: 255 KALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDV 314
KAL +L+ +R ++ +++R++ P V+VVGYTN GKTTLIKALT D ++ PR+QLFATLDV
Sbjct: 279 KALERLRRKRRLLGTQRRRRELPVVSVVGYTNSGKTTLIKALTGDAAIQPRDQLFATLDV 338
Query: 315 TTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQ 374
T H G LP+R+ ++Y+DTIGF+S +P +L+E F TLED +D+I+HV D S+P+ Q
Sbjct: 339 TAHAGSLPSRMTVIYLDTIGFLSQLPHSLIESFSATLEDVAHSDVILHVRDASHPESELQ 398
Query: 375 KQHVDETLQHLELEEKILEHVLVVGNKVDAVP 406
V L+ L L +L+ VL V NK D +P
Sbjct: 399 SASVMSALRGLRLPAPLLDGVLEVHNKADLLP 430
>gi|156403051|ref|XP_001639903.1| predicted protein [Nematostella vectensis]
gi|156227034|gb|EDO47840.1| predicted protein [Nematostella vectensis]
Length = 517
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/470 (34%), Positives = 262/470 (55%), Gaps = 36/470 (7%)
Query: 61 QDDLEESDE------FKTIRDEAQTGALGTD----HQVFVVQPFIKWGKKMKRNTTRDFM 110
Q+ LEE D K++R + D H V V++P KWG+ + T +
Sbjct: 47 QEGLEEDDHPDTLEVLKSLRAKHHYHGKAVDDPKKHGVMVIEPDYKWGRHRFKKATAEHR 106
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVT-----AVF 165
L E+ LV +I W V S I + D KSFFGKG +E L+ ++ ++ AV+
Sbjct: 107 LEEACGLVQAISNWTVNTSAIEPIRKVDTKSFFGKGKIEELQERISQAKQIEENTLDAVY 166
Query: 166 VSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRT 225
+ V L Q K L+ + V VFDR+ IV+QIFK A+T EA++Q+ +AE+PY+ +R
Sbjct: 167 LDVGQLTPRQHKELEVFWDVKVFDRFGIVLQIFKERAQTAEAKIQVELAEIPYIRSRL-V 225
Query: 226 IEDATNMNITKG---FLDSKRMVLMEREQKL--------KKALNKLKGQREMMRNKKQRQ 274
+D+ + +G F+ +ERE+++ KK L L+ RE +R+++Q++
Sbjct: 226 GDDSVEFDQQRGGTHFISGSGETQLERERRVLTERELKLKKKLEALRKHREHVRHERQKR 285
Query: 275 KFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIG 334
P V+VVGYTN GKTTLIK+LT D+ + P N+LFATLDVT H G LP+ +++L+VDT+G
Sbjct: 286 HIPVVSVVGYTNAGKTTLIKSLTGDNKMQPDNKLFATLDVTAHPGKLPSGMQVLFVDTVG 345
Query: 335 FISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEH 394
F+S++P L+E F TLED + +D+++HV DV +P+ Q + V LQ L+L +++
Sbjct: 346 FVSDLPPELVESFSATLEDMVDSDLVVHVRDVCHPEQEAQNEDVLSVLQQLKLRPALMKT 405
Query: 395 VLVVGNKVDAVPPGERVTE------EYDLLISATRGTGLAQLKEKVQDMILKATGRKNIT 448
++ V NK+D E + + ++ ISA G GL L++ +++ I+K+TGR
Sbjct: 406 IINVYNKIDKC-SAEHLQDTVSHMHTCEVQISALHGMGLDLLRKHIEEGIMKSTGRMIKR 464
Query: 449 MRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
+ + G + WL V D+ + V++ + NKF+ +F
Sbjct: 465 VVIPPDGPQLSWLYHEATVHETVADEDGF--ITATVIIDEATNNKFEKKF 512
>gi|149063752|gb|EDM14075.1| GTP binding protein 6 (putative) (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 467
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/383 (40%), Positives = 233/383 (60%), Gaps = 19/383 (4%)
Query: 128 DSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPV 187
D+ + +L D K GK K +RG +T+VF++V+ + QK L+ + + V
Sbjct: 81 DAQRVCVLHPDVKRPAGKTPRSTEK--IRGCQDITSVFLNVERMTPQTQKELETAWGLRV 138
Query: 188 FDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN-----------MNITK 236
FDR+ +V+ IF+ +A+TREAR+Q+A+AE+P L R D+ M +
Sbjct: 139 FDRFTLVLHIFRCNARTREARMQLALAEIPLL--RSSVSGDSEQQDQQGWGSRYIMGSGE 196
Query: 237 GFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKAL 296
F + + L +RE +L++ L +L+ +R +MR ++ R++FP V+VVGYTNCGKTTLI+AL
Sbjct: 197 SFSELRARALRDRELRLRRVLERLRDKRRLMRKERVRREFPVVSVVGYTNCGKTTLIRAL 256
Query: 297 TDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAML 356
T + +L PR+Q FATLDVT HEG LP+RLR+LYVDTIGF+S +P +L+ F TLED
Sbjct: 257 TGEATLQPRDQPFATLDVTVHEGRLPSRLRVLYVDTIGFLSQLPHSLIHAFSATLEDVAY 316
Query: 357 ADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD 416
+D+++HV DVS+PD QK V TL+ L L +LE + V +KVD V PG
Sbjct: 317 SDVLVHVTDVSHPDAELQKATVLSTLRGLGLRPALLESAVEVHSKVDLV-PGHTTPCSGA 375
Query: 417 LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIRE-DDT 475
L +SA G GL +LK ++ +L+ATGR+ +T+RVR GG + WL V ++E +
Sbjct: 376 LAVSAVSGRGLDELKAALEASVLRATGRQLLTIRVRLGGPQLGWLYNEAVVQQVQELPEG 435
Query: 476 SAEHLLLDVVMTDVIMNKFKHEF 498
A H + VV+T +F+ F
Sbjct: 436 GAAH--VTVVITQAAYGRFQKLF 456
>gi|115292012|gb|AAI22380.1| LOC563225 protein [Danio rerio]
Length = 372
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 232/364 (63%), Gaps = 19/364 (5%)
Query: 148 LELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREA 207
++L ++R VTAVFV+V+ L +K L++ + V V DRY +V+ IF+ +AKT+EA
Sbjct: 1 FQMLTEKIRATHGVTAVFVNVERLSPSSEKDLEEAWGVKVLDRYSLVLHIFRCNAKTKEA 60
Query: 208 RLQIAIAELPYLWTRYRTIEDATNMNITKG-----------FLDSKRMVLMEREQKLKKA 256
+LQI++AE+P +R R + N++ G + ++ +L ERE K++ A
Sbjct: 61 KLQISLAEIPLFRSRLRN--EVANLDQQGGGSRYIMGSGETLYEMQQRLLKERELKIRSA 118
Query: 257 LNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTT 316
L +L+ +R ++R++++ + FP ++V+GYTNCGKTTLIKALT DD L P++QLFATLDVT
Sbjct: 119 LKRLRRKRNLLRSQRKHKDFPIISVMGYTNCGKTTLIKALTGDDGLQPKDQLFATLDVTV 178
Query: 317 HEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQ 376
H G LP + +LYVDTIGF+S +P L++ F TLED + +D+IIHV D+S+P+ + QK
Sbjct: 179 HAGQLPCHMTVLYVDTIGFLSQLPHQLIDSFSATLEDVIHSDLIIHVRDISHPETVSQKV 238
Query: 377 HVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQD 436
+V L +L++ E++L ++ V NK+D + E E + ISA + GL LKEK+++
Sbjct: 239 NVLNVLNNLQIPERLLTSIIEVHNKIDLIEGYESSDPEV-IPISALKQRGLEALKEKIEE 297
Query: 437 MILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIRE--DDTSAEHLLLDVVMTDVIMNKF 494
+LK TG++ +T++V+ S+ WL K V + + DD +A + V+++ ++
Sbjct: 298 AVLKCTGKQMMTLKVQLNTSQLSWLYKEATVQAVDDVGDDCTAN---VKVIISQAAYGRY 354
Query: 495 KHEF 498
+ F
Sbjct: 355 RKLF 358
>gi|149063755|gb|EDM14078.1| GTP binding protein 6 (putative) (predicted), isoform CRA_d [Rattus
norvegicus]
Length = 346
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/333 (42%), Positives = 210/333 (63%), Gaps = 13/333 (3%)
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN---- 231
QK L+ + + VFDR+ +V+ IF+ +A+TREAR+Q+A+AE+P L + + +
Sbjct: 6 QKELETAWGLRVFDRFTLVLHIFRCNARTREARMQLALAEIPLLRSSVSGDSEQQDQQGW 65
Query: 232 -----MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTN 286
M + F + + L +RE +L++ L +L+ +R +MR ++ R++FP V+VVGYTN
Sbjct: 66 GSRYIMGSGESFSELRARALRDRELRLRRVLERLRDKRRLMRKERVRREFPVVSVVGYTN 125
Query: 287 CGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEP 346
CGKTTLI+ALT + +L PR+Q FATLDVT HEG LP+RLR+LYVDTIGF+S +P +L+
Sbjct: 126 CGKTTLIRALTGEATLQPRDQPFATLDVTVHEGRLPSRLRVLYVDTIGFLSQLPHSLIHA 185
Query: 347 FKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP 406
F TLED +D+++HV DVS+PD QK V TL+ L L +LE + V +KVD V
Sbjct: 186 FSATLEDVAYSDVLVHVTDVSHPDAELQKATVLSTLRGLGLRPALLESAVEVHSKVDLV- 244
Query: 407 PGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTA 466
PG L +SA G GL +LK ++ +L+ATGR+ +T+RVR GG + WL
Sbjct: 245 PGHTTPCSGALAVSAVSGRGLDELKAALEASVLRATGRQLLTIRVRLGGPQLGWLYNEAV 304
Query: 467 VSNIRE-DDTSAEHLLLDVVMTDVIMNKFKHEF 498
V ++E + A H + VV+T +F+ F
Sbjct: 305 VQQVQELPEGGAAH--VTVVITQAAYGRFQKLF 335
>gi|149063753|gb|EDM14076.1| GTP binding protein 6 (putative) (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 418
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 215/339 (63%), Gaps = 12/339 (3%)
Query: 128 DSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPV 187
D+ + +L D K GK K +RG +T+VF++V+ + QK L+ + + V
Sbjct: 81 DAQRVCVLHPDVKRPAGKTPRSTEK--IRGCQDITSVFLNVERMTPQTQKELETAWGLRV 138
Query: 188 FDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN---------MNITKGF 238
FDR+ +V+ IF+ +A+TREAR+Q+A+AE+P L + + + M + F
Sbjct: 139 FDRFTLVLHIFRCNARTREARMQLALAEIPLLRSSVSGDSEQQDQQGWGSRYIMGSGESF 198
Query: 239 LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTD 298
+ + L +RE +L++ L +L+ +R +MR ++ R++FP V+VVGYTNCGKTTLI+ALT
Sbjct: 199 SELRARALRDRELRLRRVLERLRDKRRLMRKERVRREFPVVSVVGYTNCGKTTLIRALTG 258
Query: 299 DDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLAD 358
+ +L PR+Q FATLDVT HEG LP+RLR+LYVDTIGF+S +P +L+ F TLED +D
Sbjct: 259 EATLQPRDQPFATLDVTVHEGRLPSRLRVLYVDTIGFLSQLPHSLIHAFSATLEDVAYSD 318
Query: 359 IIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLL 418
+++HV DVS+PD QK V TL+ L L +LE + V +KVD V PG L
Sbjct: 319 VLVHVTDVSHPDAELQKATVLSTLRGLGLRPALLESAVEVHSKVDLV-PGHTTPCSGALA 377
Query: 419 ISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSE 457
+SA G GL +LK ++ +L+ATGR+ +T+RVR GG +
Sbjct: 378 VSAVSGRGLDELKAALEASVLRATGRQLLTIRVRLGGPQ 416
>gi|198428706|ref|XP_002131905.1| PREDICTED: similar to MGC83645 protein [Ciona intestinalis]
Length = 567
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 163/467 (34%), Positives = 251/467 (53%), Gaps = 54/467 (11%)
Query: 82 LGTDHQVFVVQPFIKWGKKMKRN--------TTRDFMLAESKALVSSIQGWRVVDSTIIS 133
LG+ VFV+QP+ + + ++ T L ES ALV ++ W+V S I+
Sbjct: 88 LGSTRAVFVIQPY--EAEDVSKDVYISTPHITNPQLELDESVALVETLPDWKVHGSVILR 145
Query: 134 LLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVP-VFDRYM 192
+ + + F K N + L +++ V ++FVSV+ L Q+ LQ + +FDRY
Sbjct: 146 IRNKNSNEIFSKKNFQNLMEKLKEKQTVNSLFVSVEKLTNIQKATLQQASGLEHIFDRYS 205
Query: 193 IVIQIFKAHAKTREARLQIAIAELPY----LWTRYRTIEDATNMNITKG----FLDSKRM 244
+V+QIFK AKT+EA+LQ+A+A+LP + T + + KG + + R
Sbjct: 206 LVLQIFKLRAKTKEAKLQVALAQLPMDKATMKVPNETSKHQSQHQQGKGSGETYSELVRR 265
Query: 245 VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTD-DDSLV 303
+EQ+L K L +K R R ++R P AV+GYTN GKT+LIKAL+ + +
Sbjct: 266 EFNLKEQRLMKRLKHVKRIRNEHREARKRNAVPVAAVIGYTNAGKTSLIKALSVLSERIQ 325
Query: 304 PRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHV 363
P++ LFATLDVT H +LPN LR + VDT+GF+S +P +L++ FK T+ED + AD++IHV
Sbjct: 326 PKDYLFATLDVTAHAAILPNNLRYVLVDTVGFLSKLPHSLIDAFKATMEDMLQADLLIHV 385
Query: 364 VDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV------------------ 405
D+S+P Q ++V + L L+L +LE+++ V NKVD V
Sbjct: 386 RDISHPHSKNQLRNVLKVLSQLKLPPSLLENIIEVRNKVDLVKPVRDDPFSEVVGKTKKT 445
Query: 406 -------------PPGERVTEEYDLL-ISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
PG R + +SAT GTGL+ L ++Q+ I+KAT RK T+RV
Sbjct: 446 VFPDVIVPKPRSLTPGVRSLRPAVICHVSATEGTGLSSLAIQIQNGIMKATDRKVCTLRV 505
Query: 452 RSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
+ G +WL +H AV +R + +L L+V++ D + KF F
Sbjct: 506 PAVGGHLEWLREHYAVHEVR--GSGNFNLELEVIVADWQLAKFTSAF 550
>gi|324508162|gb|ADY43450.1| GTP-binding protein 6 [Ascaris suum]
Length = 496
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 162/478 (33%), Positives = 257/478 (53%), Gaps = 37/478 (7%)
Query: 46 MLAESKALVKFSDNSQDDLEES----DEFKTIRDEAQT-GALGTDHQVFVVQPFIKWGK- 99
L S+ L KF + EE+ D+++ + D A H V VV P I+WG+
Sbjct: 21 FLVRSRFLGKFCSLNATAREEASRSEDDYRILADAVGVRNASLEGHSVLVVHPRIRWGRH 80
Query: 100 KMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISL-LSFDKKSFFGKGNLELLKRQVRGD 158
+TT + L E+ AL +++ +RV S ++ + K+ + +G L+ L +++
Sbjct: 81 SAPASTTAELQLQEAVALTNTLPNFRVCSSVVVGTDYNTKKRRIWAQGRLDTLA-ELKEK 139
Query: 159 ARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY 218
R TA+ ++VDVL QQ L F+VP+FDRY IV+ IFK AKT+EARLQ+ +AE+PY
Sbjct: 140 ERATAIMINVDVLSPLQQAELFSFFRVPIFDRYNIVLLIFKKFAKTKEARLQVELAEIPY 199
Query: 219 LWTRYRTIE----DATNMNIT-----KGFLDSKRMVLMEREQKLKK--------ALNKLK 261
+ R + I+ D + +++T KG K VL RE L+K LN +
Sbjct: 200 IRHRLKCIDVEHIDPSILHVTFPISTKG---DKWEVLRLREHTLRKRIKAAVDEKLNAVN 256
Query: 262 GQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGML 321
G+R QR TVA+VGYTN GK++LI+ LT D+S+ ++LFATLD + H L
Sbjct: 257 GER------IQRGIAATVALVGYTNTGKSSLIRRLTQDESIFVEDRLFATLDSSAHFCRL 310
Query: 322 PNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDET 381
P+ IL DTIGFIS++P L F TL + AD+++ V DVS+P+ + Q++ V ET
Sbjct: 311 PSGTPILLTDTIGFISDLPMQLFASFHATLSHVVNADLLLVVEDVSHPNVMAQREVVIET 370
Query: 382 LQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLL-ISATRGTGLAQLKEKVQDMILK 440
L L ++ +++ ++ VGNK D + P ++ + D+ IS G+G+ QL ++ ++
Sbjct: 371 LDALSVKRSLVDSLIYVGNKCDKIDP--QLCHQPDVCYISCLNGSGIKQLIAEIDKRVMA 428
Query: 441 ATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
G +++ SG +L + + + + + LL VVM D KF+ F
Sbjct: 429 LRGSVVRHLKLHSGSPALPYLYRESLLISQPIPVDGDDFLLCKVVMDDAQFAKFRARF 486
>gi|149063756|gb|EDM14079.1| GTP binding protein 6 (putative) (predicted), isoform CRA_e [Rattus
norvegicus]
Length = 297
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/291 (45%), Positives = 192/291 (65%), Gaps = 10/291 (3%)
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN---- 231
QK L+ + + VFDR+ +V+ IF+ +A+TREAR+Q+A+AE+P L + + +
Sbjct: 6 QKELETAWGLRVFDRFTLVLHIFRCNARTREARMQLALAEIPLLRSSVSGDSEQQDQQGW 65
Query: 232 -----MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTN 286
M + F + + L +RE +L++ L +L+ +R +MR ++ R++FP V+VVGYTN
Sbjct: 66 GSRYIMGSGESFSELRARALRDRELRLRRVLERLRDKRRLMRKERVRREFPVVSVVGYTN 125
Query: 287 CGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEP 346
CGKTTLI+ALT + +L PR+Q FATLDVT HEG LP+RLR+LYVDTIGF+S +P +L+
Sbjct: 126 CGKTTLIRALTGEATLQPRDQPFATLDVTVHEGRLPSRLRVLYVDTIGFLSQLPHSLIHA 185
Query: 347 FKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP 406
F TLED +D+++HV DVS+PD QK V TL+ L L +LE + V +KVD V
Sbjct: 186 FSATLEDVAYSDVLVHVTDVSHPDAELQKATVLSTLRGLGLRPALLESAVEVHSKVDLV- 244
Query: 407 PGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSE 457
PG L +SA G GL +LK ++ +L+ATGR+ +T+RVR GG +
Sbjct: 245 PGHTTPCSGALAVSAVSGRGLDELKAALEASVLRATGRQLLTIRVRLGGPQ 295
>gi|312073353|ref|XP_003139482.1| hypothetical protein LOAG_03897 [Loa loa]
Length = 672
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 149/411 (36%), Positives = 242/411 (58%), Gaps = 19/411 (4%)
Query: 68 DEFKTIRDEAQTGALGTD-HQVFVVQPFIKWGKKMKRNTTR-DFMLAESKALVSSIQGWR 125
DEF I ++ ++ H+V ++ P ++ G+ N T+ L E+ ALV+++ ++
Sbjct: 71 DEFNIISKSYGIQSIASEVHRVLLIHPRLRRGRFFDLNPTKAKLQLEEAVALVNTLPNFK 130
Query: 126 VVDSTIISL-LSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQ 184
V+++T +S S +KK +G G +E + ++G TA+ + VD+L QQ L +F+
Sbjct: 131 VIETTAVSTDRSTEKKRLWGSGRIERII-ALKGKIAATALMIDVDILSPKQQAELASIFR 189
Query: 185 VPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLD---- 240
+PV+DRY IV+ IFK AKT+EA+LQI +AE+PY+ R ++ + +N + LD
Sbjct: 190 IPVYDRYNIVLLIFKMFAKTKEAKLQIQLAEIPYIRQRLLSMYE-LRVNPSTFHLDTSEK 248
Query: 241 --SKRM-VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV-AVVGYTNCGKTTLIKAL 296
++R+ VL REQ L+K L ++ +R + ++ TV AVVGYTN GK++LIK L
Sbjct: 249 SRAERLEVLRYREQHLRKCLKAAVEEKINLRIGEAQKNIQTVIAVVGYTNAGKSSLIKRL 308
Query: 297 TDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAML 356
T + V ++LFATLD + H LP+ L IL+ DTIGFISN+PT LL F+ TL
Sbjct: 309 TGRNLYV-EDRLFATLDTSLHVFRLPSGLPILFADTIGFISNLPTQLLASFQATLNHVAN 367
Query: 357 ADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP--PGERVTEE 414
A++++HV D+SNPDYL Q+ V +TL L+++ ++L+ V+ VGNK+D + P + E
Sbjct: 368 ANLLLHVEDISNPDYLTQRDVVMKTLSALKIKNELLDSVIRVGNKIDKLSRLPAD---EP 424
Query: 415 YDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHT 465
+S G GL +L V +L +G +++R + +L K++
Sbjct: 425 NTYFVSCADGRGLVELMAAVDKRVLTISGVTIRRLKLRPHSEAFSYLCKYS 475
>gi|393908040|gb|EFO24586.2| hypothetical protein LOAG_03897 [Loa loa]
Length = 680
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 149/411 (36%), Positives = 242/411 (58%), Gaps = 19/411 (4%)
Query: 68 DEFKTIRDEAQTGALGTD-HQVFVVQPFIKWGKKMKRNTTR-DFMLAESKALVSSIQGWR 125
DEF I ++ ++ H+V ++ P ++ G+ N T+ L E+ ALV+++ ++
Sbjct: 71 DEFNIISKSYGIQSIASEVHRVLLIHPRLRRGRFFDLNPTKAKLQLEEAVALVNTLPNFK 130
Query: 126 VVDSTIISL-LSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQ 184
V+++T +S S +KK +G G +E + ++G TA+ + VD+L QQ L +F+
Sbjct: 131 VIETTAVSTDRSTEKKRLWGSGRIERII-ALKGKIAATALMIDVDILSPKQQAELASIFR 189
Query: 185 VPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLD---- 240
+PV+DRY IV+ IFK AKT+EA+LQI +AE+PY+ R ++ + +N + LD
Sbjct: 190 IPVYDRYNIVLLIFKMFAKTKEAKLQIQLAEIPYIRQRLLSMYE-LRVNPSTFHLDTSEK 248
Query: 241 --SKRM-VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV-AVVGYTNCGKTTLIKAL 296
++R+ VL REQ L+K L ++ +R + ++ TV AVVGYTN GK++LIK L
Sbjct: 249 SRAERLEVLRYREQHLRKCLKAAVEEKINLRIGEAQKNIQTVIAVVGYTNAGKSSLIKRL 308
Query: 297 TDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAML 356
T + V ++LFATLD + H LP+ L IL+ DTIGFISN+PT LL F+ TL
Sbjct: 309 TGRNLYV-EDRLFATLDTSLHVFRLPSGLPILFADTIGFISNLPTQLLASFQATLNHVAN 367
Query: 357 ADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP--PGERVTEE 414
A++++HV D+SNPDYL Q+ V +TL L+++ ++L+ V+ VGNK+D + P + E
Sbjct: 368 ANLLLHVEDISNPDYLTQRDVVMKTLSALKIKNELLDSVIRVGNKIDKLSRLPAD---EP 424
Query: 415 YDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHT 465
+S G GL +L V +L +G +++R + +L K++
Sbjct: 425 NTYFVSCADGRGLVELMAAVDKRVLTISGVTIRRLKLRPHSEAFSYLCKYS 475
>gi|297709285|ref|XP_002831367.1| PREDICTED: putative GTP-binding protein 6, partial [Pongo abelii]
Length = 274
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/269 (44%), Positives = 183/269 (68%), Gaps = 6/269 (2%)
Query: 232 MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTT 291
M + F+ ++ +L E+E K++KAL++L+ +R ++R ++ R++FP ++VVGYTNCGKTT
Sbjct: 8 MGSGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPVISVVGYTNCGKTT 67
Query: 292 LIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTL 351
LIKALT D ++ PR+QLFATLDVT H G LP+R+ +LYVDTIGF+S +P L+E F TL
Sbjct: 68 LIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGLIESFSATL 127
Query: 352 EDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERV 411
ED +D+I+HV D+S+P+ QK V TL+ L+L +L+ ++ + NKVD V PG
Sbjct: 128 EDVAHSDLILHVRDISHPEAELQKCSVLSTLRGLQLPAPLLDSMVEIHNKVDLV-PGYSP 186
Query: 412 TEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVS--N 469
TE + +SA RG GL +LK ++ +LKATGR+ +T+RVR G++ WL K V +
Sbjct: 187 TEPNVVPVSALRGHGLQELKAELDAAVLKATGRQILTLRVRLAGAQLSWLHKEATVQEVD 246
Query: 470 IREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
+ +D +A+ + V+++D KF+ F
Sbjct: 247 VIPEDGAAD---VRVIISDSAYGKFRKLF 272
>gi|402594397|gb|EJW88323.1| GTP-binding protein HflX [Wuchereria bancrofti]
Length = 445
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 162/453 (35%), Positives = 252/453 (55%), Gaps = 27/453 (5%)
Query: 67 SDEFKTIRDE--AQTGALGTDHQVFVVQPFIKWGKKMKRNTTR-DFMLAESKALVSSIQG 123
+DEF I Q+ A G ++ ++ P ++ G+ N R L E+ ALV+++
Sbjct: 2 NDEFNIISKSYGIQSIAPGV-QRILLIHPRLRRGRFFDLNPARAKLQLEEAVALVNTLPN 60
Query: 124 WRVVDSTIISL-LSFDKKSFFGKGNLE---LLKRQVRGDARVTAVFVSVDVLKLHQQKML 179
++V+++T +S S KK +G G ++ LK ++ TA+ + VD+L QQ L
Sbjct: 61 FKVMETTAVSTDRSTKKKRLWGSGRIQRIIALKEKISA----TALMIDVDILSPKQQAEL 116
Query: 180 QDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTR----YRTIEDATNMNI- 234
+F+ P++DRY IV+ IFK AKT+EA+LQI +AE+PY+ R Y D + +++
Sbjct: 117 TSIFRTPIYDRYNIVLLIFKIFAKTKEAKLQIQLAEIPYIRQRLLSMYELHVDPSLLHLD 176
Query: 235 TKGFLDSKRM-VLMEREQKLKKALNKLKGQREMMR-NKKQRQKFPTVAVVGYTNCGKTTL 292
T ++R+ VL REQ L+K L ++ +R + Q+ VAVVGYTN GK++L
Sbjct: 177 TSEKSKTERLEVLRYREQHLRKCLKAAVEEKVNLRIGEAQKNIRTVVAVVGYTNAGKSSL 236
Query: 293 IKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLE 352
IK LT + V ++LFATLD + H LP+ L IL+ DTIGFISN+PT LL F+ TL
Sbjct: 237 IKRLTGRNLYV-EDRLFATLDTSLHVFRLPSGLPILFADTIGFISNLPTQLLASFQATLN 295
Query: 353 DAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA---VPPGE 409
AD+++HV DVSNPDYL Q+ V +TL L++ ++L+ V+ VGNK+D +PP E
Sbjct: 296 HVANADLLLHVEDVSNPDYLTQRNVVMKTLSALKVRNELLKSVIRVGNKIDKLCRLPPNE 355
Query: 410 RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSN 469
T +S G G +L V +L +G +++R + +L K++ +
Sbjct: 356 PNT----YFVSCADGRGFVELLAAVDKRVLTISGVTIRRLKLRPHSEAFSYLCKYSFLVG 411
Query: 470 IREDDTSAEHLLLDVVMTDVIMNKFKHEFISSR 502
+LL +VVM D +KF+ F S+
Sbjct: 412 QPIPSEDNNYLLCNVVMDDNEFSKFRANFSFSK 444
>gi|268559272|ref|XP_002637627.1| Hypothetical protein CBG19372 [Caenorhabditis briggsae]
Length = 1328
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 242/435 (55%), Gaps = 27/435 (6%)
Query: 88 VFVVQPFIKWGKKMKRNTTR-DFMLAESKALVSSIQGWRVVDSTIISL-LSFDKKSFFGK 145
V VV P ++WG + D L E+ ALV+++ VDS I+ + + +KS +
Sbjct: 902 VLVVHPKVRWGSGSASVLKQADRQLEEAVALVNNLPNMIAVDSLIMPVDYNTKRKSIWAA 961
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
GNLE L + R AR TA+ ++VDVL QQ+ L +F+VP+FDRY IV+ FK A+T
Sbjct: 962 GNLEKLVTR-REAARATALMINVDVLSPSQQEELFRIFEVPIFDRYNIVLSTFKEFAQTD 1020
Query: 206 EARLQIAIAELPYLWTRYRTIED------ATNMNITKGFLDSK---RMVLMEREQKLKKA 256
EA+LQIA+AE+PY+ R + ++I + + + + +L +REQ L++
Sbjct: 1021 EAQLQIALAEIPYIKNRIHALSSKRLHSRPEILHIEQQYAEVEGDLNEILRKREQDLRRD 1080
Query: 257 LNKL-KGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L +L + E +++K VAVVGYTN GKT+L+K LT SL P+NQLFATLD T
Sbjct: 1081 LKELTRKSSESIKSKNSSDA--VVAVVGYTNAGKTSLVKRLTGASSLTPKNQLFATLDTT 1138
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
H LP+ ++ DTIGF+S++P L+ F+ TL AD+IIH+ DVSNPD+ Q+
Sbjct: 1139 RHVAKLPSGRSAVFTDTIGFLSDLPMHLISAFEATLAHVKSADVIIHLRDVSNPDWKAQE 1198
Query: 376 QHVDETLQHLELEEKIL-EHVLVVGNKVDAVPPGERVTEEYD-----LLISATRGTGLAQ 429
+ V TL+ + + E +L E ++ V NK+D E V D + IS G G+
Sbjct: 1199 EDVVATLKSIGVAENVLTERMITVDNKIDK----EGVENIADATTKSIRISCKTGDGMQD 1254
Query: 430 LKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDV 489
L +++ + AT K I R+ +WL + V + E +L+ DVVM++
Sbjct: 1255 LIDRINQKVTIATKCKTIRFRLDVRSPVIEWLYHNEFV--VVEPVADGNNLIFDVVMSES 1312
Query: 490 IMNKFKHEFISSRKR 504
+ +F+ +F RK+
Sbjct: 1313 EIGRFRKKFDHLRKK 1327
>gi|344258270|gb|EGW14374.1| Putative GTP-binding protein 6 [Cricetulus griseus]
Length = 267
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 121/272 (44%), Positives = 179/272 (65%), Gaps = 12/272 (4%)
Query: 232 MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTT 291
M + F + VL E+E K+++AL +L+ +R ++R ++ +++FP V+VVGYTNCGKTT
Sbjct: 1 MGSGESFTKLRHRVLKEKEAKIRRALERLRDKRSLLRRQRTQREFPIVSVVGYTNCGKTT 60
Query: 292 LIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTL 351
LIKALT + ++ PR+QLFATLDVT H G LP+R+ +LY+DTIGF+S +P +L++ F TL
Sbjct: 61 LIKALTGEAAMQPRDQLFATLDVTAHAGSLPSRIPVLYMDTIGFLSQLPHSLIQSFSATL 120
Query: 352 EDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV----PP 407
ED +D+I+HV DVS+P QQK V TLQ L+L +L+ +L V NKVD V PP
Sbjct: 121 EDVAHSDVIMHVRDVSHPSTEQQKASVLSTLQGLQLPSALLDSMLEVHNKVDLVPGYSPP 180
Query: 408 GERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
G V L +SA G GL +LK +++ +L+ATGR+ +T+ VR GG + WL K V
Sbjct: 181 GPGV-----LAVSALLGHGLDELKAALEESVLRATGRQVLTLCVRLGGPQLSWLYKEATV 235
Query: 468 SNIRE-DDTSAEHLLLDVVMTDVIMNKFKHEF 498
++E +T A H + V+++ +F+ F
Sbjct: 236 QQVQELPETGAAH--VTVIISRAAYGRFRKLF 265
>gi|119587224|gb|EAW66820.1| GTP binding protein 6 (putative) [Homo sapiens]
Length = 267
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/269 (44%), Positives = 182/269 (67%), Gaps = 6/269 (2%)
Query: 232 MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTT 291
M + F+ ++ +L E+E K++KAL++L+ +R ++ ++ R++FP ++VVGYTNCGKTT
Sbjct: 1 MGSGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLCRQRTRREFPVISVVGYTNCGKTT 60
Query: 292 LIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTL 351
LIKALT D ++ PR+QLFATLDVT H G LP+R+ +LYVDTIGF+S +P L+E F TL
Sbjct: 61 LIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGLIESFSATL 120
Query: 352 EDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERV 411
ED +D+I+HV DVS+P+ QK V TL+ L+L +L+ ++ V NKVD V PG
Sbjct: 121 EDVAHSDLILHVRDVSHPEAELQKCSVLSTLRGLQLPAPLLDSMVEVHNKVDLV-PGYSP 179
Query: 412 TEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVS--N 469
TE + +SA RG GL +LK ++ +LKATGR+ +T+RVR G++ WL K V +
Sbjct: 180 TEPNVVPVSALRGHGLQELKAELDAAVLKATGRQILTLRVRLAGAQLSWLYKEATVQEVD 239
Query: 470 IREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
+ +D +A+ + V++++ KF+ F
Sbjct: 240 VIPEDGAAD---VRVIISNSAYGKFRKLF 265
>gi|341879373|gb|EGT35308.1| hypothetical protein CAEBREN_11668 [Caenorhabditis brenneri]
Length = 465
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 237/431 (54%), Gaps = 16/431 (3%)
Query: 87 QVFVVQPFIKWGKKMKRNTTR-DFMLAESKALVSSIQGWRVVDSTIISL-LSFDKKSFFG 144
V VV P ++WG + D L E+ ALV+++ VDS I+ + + +KS +
Sbjct: 37 SVLVVHPKVRWGSGSASVLKQADRQLDEAVALVNNLPNMIAVDSLIMPVDYNTKRKSIWA 96
Query: 145 KGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKT 204
GNLE L + R +AR TA+ V+VDVL QQ+ L +F+VP+FDRY IV+ FK A+T
Sbjct: 97 TGNLEKLVAR-REEARATALMVNVDVLSPTQQEELFRIFEVPIFDRYNIVLSTFKEFART 155
Query: 205 REARLQIAIAELPYLWTRYRTIED------ATNMNITKGFLDSK---RMVLMEREQKLKK 255
EARLQIA+AE+PY+ R + ++I + + + + +L +REQ L++
Sbjct: 156 DEARLQIALAEIPYIKHRIHALSSKRLHSRPEILHIEQQYSEIEGDLNEILRKREQDLRR 215
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L K ++ + + VAVVGYTN GKT+L+K LT SL P++QLFATLD T
Sbjct: 216 DL-KEATRKSAEQVGVKNSSDAVVAVVGYTNAGKTSLVKRLTGAVSLTPKDQLFATLDTT 274
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
H LP+ ++ DTIGF+S++P L+ F+ TL AD+IIH+ DVSNPD+ Q+
Sbjct: 275 RHVAKLPSGRSAVFTDTIGFLSDLPMHLISAFEATLAHVKSADVIIHLRDVSNPDWKAQE 334
Query: 376 QHVDETLQHLELEEKIL-EHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKV 434
+ V TL+ + + + +L E ++ V NK+D + IS G G+++L E +
Sbjct: 335 EDVVATLKSIGIADNVLTERMITVDNKIDKEGATNASESINSVRISCKTGDGMSELVELL 394
Query: 435 QDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKF 494
+ + AT K I +R+ WL + V + E +L+ DVVM + + +F
Sbjct: 395 NEKVTMATRCKTIRLRLDVRSPVINWLYHNEFV--VVEPIVDGNNLIFDVVMNESEVGRF 452
Query: 495 KHEFISSRKRG 505
+ F RK+
Sbjct: 453 RKTFAHLRKKS 463
>gi|148688101|gb|EDL20048.1| GTP binding protein 6 (putative), isoform CRA_c [Mus musculus]
Length = 338
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/310 (41%), Positives = 184/310 (59%), Gaps = 19/310 (6%)
Query: 202 AKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLK 261
+ REAR+Q+A+AE+P L + ++ + +G+ M E +L+ + +
Sbjct: 27 GRDREARMQLALAEIPLLRS---SVNTDSGQQDQQGWGSRYIMGSGESPTELRARALRDR 83
Query: 262 G------------QREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
+R +MR ++ RQ+FP V+VVGYTNCGKTTLI+ALT + +L PR+Q F
Sbjct: 84 ELRLRRVLERLRDKRRLMRKERVRQEFPVVSVVGYTNCGKTTLIQALTGEAALQPRDQPF 143
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLDVT H G+LP+RLRILYVDTIGF+S +P +L+ F TLED +D+++HV DVS+P
Sbjct: 144 ATLDVTVHAGLLPSRLRILYVDTIGFLSQLPHSLIHAFSATLEDVAYSDVLVHVTDVSHP 203
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQ 429
D QK V TL+ L L +LE L V +KVD V PG L +SA G GL +
Sbjct: 204 DAELQKATVLSTLRGLHLPPALLESALEVHSKVDLV-PGYTPPCSGALAVSAISGRGLDE 262
Query: 430 LKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIRE-DDTSAEHLLLDVVMTD 488
LK ++ +L+ATGR+ +T+ VR GG + WL K V ++E + A H + VV+T
Sbjct: 263 LKAALEASVLRATGRQVLTLCVRLGGPQLGWLYKEAVVQQVQELPEGDAAH--VTVVITQ 320
Query: 489 VIMNKFKHEF 498
+F+ F
Sbjct: 321 AAYGRFRKLF 330
>gi|17561038|ref|NP_505523.1| Protein F46B6.4 [Caenorhabditis elegans]
gi|3877202|emb|CAA94821.1| Protein F46B6.4 [Caenorhabditis elegans]
Length = 468
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 240/445 (53%), Gaps = 23/445 (5%)
Query: 77 AQTGALGTDH-QVFVVQPFIKWGKKMKRNTTR-DFMLAESKALVSSIQGWRVVDSTIISL 134
A A D V VV P ++WG + D L E+ ALV ++ VDS I+ +
Sbjct: 25 AAPSAFANDRWSVLVVHPKVRWGSGSASVLKQADRQLEEAVALVDNLPNMNAVDSLIMPV 84
Query: 135 -LSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMI 193
+ +K+ + GNLE L + AR TA+ V+VD L QQ+ L +F+VP+FDRY I
Sbjct: 85 DYNTKRKAVWASGNLEKLIARREA-ARATALMVNVDALSPSQQQELYRIFEVPIFDRYNI 143
Query: 194 VIQIFKAHAKTREARLQIAIAELPYLWTRYRTIE--------DATNMNITKGFLDSK-RM 244
V+ FK AKT EAR+QIAIAE+PY+ R + D +++ +D
Sbjct: 144 VLATFKQFAKTEEARIQIAIAEIPYIKHRIHALSSKRLHSRPDILHIDSHYSDIDGDLNE 203
Query: 245 VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVP 304
+L +REQ L+K L + ++ + + + VAVVGYTN GKT+L+K LT SL P
Sbjct: 204 ILRKREQDLRKELKDVT-RKNVGQLGVRNSSDAVVAVVGYTNSGKTSLVKKLTGAASLTP 262
Query: 305 RNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
++QLFATLD T H LP+ ++ DTIGF+S++P L+ F+ TL AD+IIH+
Sbjct: 263 KDQLFATLDTTRHLAKLPSGRSAVFTDTIGFLSDLPMHLIAAFEATLAHVKSADVIIHLR 322
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKIL-EHVLVVGNKVD---AVPPGERVTEEYDLLIS 420
D+SNPD+ Q++ V TL+ + + + +L E ++ V NK+D A P E + IS
Sbjct: 323 DISNPDWKAQEEDVLATLKSIGVTDYVLNERIISVDNKIDKESAFPTSE---SNNSVRIS 379
Query: 421 ATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHL 480
G G+ +L + + D + T K I +R+ + +WL + V + E +L
Sbjct: 380 CKTGDGMHELIDVINDKVTMVTKCKTIRLRLDARSPVIEWLYHNELV--VIEPTIDGNYL 437
Query: 481 LLDVVMTDVIMNKFKHEFISSRKRG 505
+ DVVM + + +F+ +F +K+
Sbjct: 438 IFDVVMNESEIGRFRKKFAHLKKKN 462
>gi|170577269|ref|XP_001893946.1| MGC83645 protein [Brugia malayi]
gi|158599735|gb|EDP37219.1| MGC83645 protein, putative [Brugia malayi]
Length = 567
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 248/443 (55%), Gaps = 31/443 (6%)
Query: 64 LEESDEFKTIRDE--AQTGALGTDHQVFVVQPFIKWGKKMKRNTTR-DFMLAESKALVSS 120
++ +DEF I Q+ A G ++ ++ P ++ G+ N R L E+ ALV++
Sbjct: 7 MQMTDEFNIISKSYGIQSIAPGV-QRILLIHPRLRRGRFFDLNPERAKLQLEEAVALVNT 65
Query: 121 IQGWRVVDSTIISL-LSFDKKSFFGKGNLE---LLKRQVRGDARVTAVFVSVDVLKLHQQ 176
+ ++V+++T +S S KK +G G ++ LK ++ TA+ + VD+L QQ
Sbjct: 66 LPNFKVMETTAVSTDRSTKKKRLWGSGRIQRIIALKEKISA----TALMIDVDILSPKQQ 121
Query: 177 KMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTR----YRTIEDATNM 232
L +F+ P++DRY IV+ IFK AKT+EA+LQI +AE+PY+ R Y D + +
Sbjct: 122 AELTSIFRTPIYDRYNIVLLIFKIFAKTKEAKLQIQLAEIPYIRQRLLSMYELHVDPSLL 181
Query: 233 NI-TKGFLDSKRM-VLMEREQKLKKALNKLKGQREMMR-NKKQRQKFPTVAVVGYTNCGK 289
++ T ++R+ VL REQ L+K L ++ +R + Q+ VAV GYTN GK
Sbjct: 182 HLDTSEKSKAERLEVLRYREQHLRKCLKAAVEEKVNLRIGEAQKNIRTVVAVAGYTNAGK 241
Query: 290 TTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKV 349
++LIK LT + V ++LFATLD + H LP+ L IL+ DTIGFISN+PT LL F+
Sbjct: 242 SSLIKRLTGRNLYV-EDRLFATLDTSLHVFRLPSGLPILFADTIGFISNLPTQLLASFQA 300
Query: 350 TLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA---VP 406
TL AD+++HV DVSNPDYL Q+ V +TL L++ ++L+ V+ VGNK+D +P
Sbjct: 301 TLNHVANADLLLHVEDVSNPDYLTQRNVVMKTLSALKIRNELLKSVIRVGNKIDKLCRLP 360
Query: 407 PGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTA 466
P E T +S G G +L + +L +G +++R + +L K++
Sbjct: 361 PHESNT----YFVSCADGRGFVELLAAIDKRVLAISGVTIRRLKLRPHSEAFSYLCKYSF 416
Query: 467 VSN--IREDDTSAEHLLLDVVMT 487
+ I DD + +LL + ++
Sbjct: 417 LVGQPIPSDDNN--YLLCNPIIA 437
>gi|341881190|gb|EGT37125.1| hypothetical protein CAEBREN_31152 [Caenorhabditis brenneri]
Length = 480
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 155/449 (34%), Positives = 241/449 (53%), Gaps = 37/449 (8%)
Query: 87 QVFVVQPFIKWGKKMKRNTTR-DFMLAESKALVSSIQGWRVVD--------------STI 131
V VV P ++WG + D L E+ ALV+++ V+ S++
Sbjct: 37 SVLVVHPKVRWGSGSASVLKQADRQLDEAVALVNNLPNMIAVEYVTIFTLWLYIRFYSSL 96
Query: 132 ISLLSFD--KKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFD 189
I + ++ +KS + GNLE L + R +AR TA+ V+VDVL QQ+ L +F+VP+FD
Sbjct: 97 IMPVDYNTKRKSIWATGNLEKLVAR-REEARATALMVNVDVLSPTQQEELFRIFEVPIFD 155
Query: 190 RYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIED------ATNMNITKGFLDSK- 242
RY IV+ FK A+T EARLQIA+AE+PY+ R + ++I + + + +
Sbjct: 156 RYNIVLSTFKEFARTDEARLQIALAEIPYIKHRIHALSSKRLHSRPEILHIEQQYSEIEG 215
Query: 243 --RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDD 300
+L +REQ L++ L + + K VAVVGYTN GKT+L+K LT
Sbjct: 216 DLNEILRKREQDLRRDLKEATRKSAEQVGVKNSSD-AVVAVVGYTNAGKTSLVKRLTGAV 274
Query: 301 SLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADII 360
SL P++QLFATLD T H LP+ ++ DTIGF+S++P L+ F+ TL AD+I
Sbjct: 275 SLTPKDQLFATLDTTRHVAKLPSGRSAVFTDTIGFLSDLPMHLISAFEATLAHVKSADVI 334
Query: 361 IHVVDVSNPDYLQQKQHVDETLQHLELEEKIL-EHVLVVGNKVD---AVPPGERVTEEYD 416
IH+ DVSNPD+ Q++ V TL+ + + + +L E ++ V NK+D A+ E +
Sbjct: 335 IHLRDVSNPDWKAQEEDVVATLRSIGVADNVLTERMITVDNKIDKEGAINASESIN---S 391
Query: 417 LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTS 476
+ IS G G+++L E + + + AT K I +R+ WL + V + E
Sbjct: 392 VRISCKTGDGMSELVELLNEKVTMATRCKTIRLRLDVRSPVINWLYHNEFV--VVEPIVD 449
Query: 477 AEHLLLDVVMTDVIMNKFKHEFISSRKRG 505
+L+ DVVM + + +F+ F RK+
Sbjct: 450 GNNLIFDVVMNESEVGRFRKTFAHLRKKS 478
>gi|308484292|ref|XP_003104346.1| hypothetical protein CRE_22804 [Caenorhabditis remanei]
gi|308257994|gb|EFP01947.1| hypothetical protein CRE_22804 [Caenorhabditis remanei]
Length = 453
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 152/434 (35%), Positives = 236/434 (54%), Gaps = 28/434 (6%)
Query: 87 QVFVVQPFIKWGKKMKRNTTR-DFMLAESKALVSSIQGWRVVDSTIISL-LSFDKKSFFG 144
V VV P ++WG + D L E+ ALV+++ VDS I+ + + +KS +
Sbjct: 19 SVLVVHPKVRWGSGSASVLKQADRQLEEAVALVNNLPNMIAVDSLIMPVDYNTKRKSIWA 78
Query: 145 KGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKT 204
GNLE L + R AR TA+ V+VDVL QQ+ L +F+VP+FDRY IV+ FK A+T
Sbjct: 79 AGNLEKLVAR-RETARATALMVNVDVLSPAQQEELFGIFEVPIFDRYNIVLSTFKEFART 137
Query: 205 REARLQIAIAELPYLWTRYRTIE-------------DATNMNITKGFLDSKRMVLMEREQ 251
EARLQI++AE+PY+ R + + I G L+ +L +REQ
Sbjct: 138 DEARLQISLAEIPYIKHRIHALASKRLHSRPEILHVEQQYAEIEGGDLNE---ILRKREQ 194
Query: 252 KLKKALNKL--KGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
L++ L + + + K +AVVGYTN GKT+L+K LT +SL P++QLF
Sbjct: 195 DLRRDLKEATRRATEQQSGGSKHSSDAAVIAVVGYTNTGKTSLVKRLTGAESLKPKDQLF 254
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T H LP+ ++ DTIGF+S++P L+ F+ TL AD+IIH+ DVSNP
Sbjct: 255 ATLDTTRHVAKLPSGRSAVFTDTIGFLSDLPIHLIAAFEATLAHVKSADVIIHLRDVSNP 314
Query: 370 DYLQQKQHVDETLQHLELEEKIL-EHVLVVGNKVD---AVPPGERVTEEYDLLISATR-G 424
D+ Q++ V TL+ + + +++ E ++ V NK+D +V E E + + + G
Sbjct: 315 DWKAQEEDVVATLKSIGVAREVMAERMITVDNKIDKDTSVDSPESSLSESSSIRISCKTG 374
Query: 425 TGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDV 484
G+A+L + + + AT K I +R+ +WL + V + E + L+ DV
Sbjct: 375 DGMAELIGVINEKVSIATKCKTIRLRLDVRSPVIEWLYHNEFV--VVEPISDGNMLIFDV 432
Query: 485 VMTDVIMNKFKHEF 498
VM + + +F+ +F
Sbjct: 433 VMNESEIGRFRKKF 446
>gi|148688099|gb|EDL20046.1| GTP binding protein 6 (putative), isoform CRA_a [Mus musculus]
Length = 307
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/237 (48%), Positives = 155/237 (65%), Gaps = 4/237 (1%)
Query: 263 QREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLP 322
+R +MR ++ RQ+FP V+VVGYTNCGKTTLI+ALT + +L PR+Q FATLDVT H G+LP
Sbjct: 64 KRRLMRKERVRQEFPVVSVVGYTNCGKTTLIQALTGEAALQPRDQPFATLDVTVHAGLLP 123
Query: 323 NRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETL 382
+RLRILYVDTIGF+S +P +L+ F TLED +D+++HV DVS+PD QK V TL
Sbjct: 124 SRLRILYVDTIGFLSQLPHSLIHAFSATLEDVAYSDVLVHVTDVSHPDAELQKATVLSTL 183
Query: 383 QHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKAT 442
+ L L +LE L V +KVD V PG L +SA G GL +LK ++ +L+AT
Sbjct: 184 RGLHLPPALLESALEVHSKVDLV-PGYTPPCSGALAVSAISGRGLDELKAALEASVLRAT 242
Query: 443 GRKNITMRVRSGGSEYQWLMKHTAVSNIRE-DDTSAEHLLLDVVMTDVIMNKFKHEF 498
GR+ +T+ VR GG + WL K V ++E + A H + VV+T +F+ F
Sbjct: 243 GRQVLTLCVRLGGPQLGWLYKEAVVQQVQELPEGDAAH--VTVVITQAAYGRFRKLF 297
>gi|440907437|gb|ELR57588.1| Putative GTP-binding protein 6, partial [Bos grunniens mutus]
Length = 292
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 119/270 (44%), Positives = 175/270 (64%), Gaps = 6/270 (2%)
Query: 231 NMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKT 290
M + FL ++ +L +RE K++KAL +L+ +R ++ +++R++FP V+VVGYTNCGKT
Sbjct: 25 TMGSGESFLQLQQRLLRDREAKIQKALERLRCKRRLLGQQRRRKEFPVVSVVGYTNCGKT 84
Query: 291 TLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVT 350
TLIKALT D ++ PRNQLFATLD+T H G LP+ L +LY+DTIGF+S +P +L+E F T
Sbjct: 85 TLIKALTGDATIQPRNQLFATLDITAHAGRLPSALTVLYMDTIGFLSQLPHSLVESFSAT 144
Query: 351 LEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER 410
L+D +D+I+HV DVS+P+ QK V L+ L L + +LE ++ V NKVD V PG
Sbjct: 145 LQDVAHSDLIVHVRDVSHPETELQKASVLSALRGLGLPDALLESMVEVHNKVDLV-PGYT 203
Query: 411 VTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNI 470
E L +SA G GL +L +V+D +L+ATGR+ +T+RVR G + WL + V +
Sbjct: 204 PAEPDVLAVSALLGLGLDELMARVEDAVLRATGRRTLTLRVRLAGPQLSWLHQEATVQAV 263
Query: 471 REDDTSAEHLLLD--VVMTDVIMNKFKHEF 498
D E D V+++D +F+ F
Sbjct: 264 ---DVIPEAGAADVKVIISDSAYGRFRKLF 290
>gi|20379953|gb|AAH27821.1| GTP binding protein 6 (putative) [Mus musculus]
gi|26349587|dbj|BAC38433.1| unnamed protein product [Mus musculus]
Length = 307
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 155/237 (65%), Gaps = 4/237 (1%)
Query: 263 QREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLP 322
+R +MR ++ R++FP V+VVGYTNCGKTTLI+ALT + +L PR+Q FATLDVT H G+LP
Sbjct: 64 KRRLMRKERVRREFPVVSVVGYTNCGKTTLIQALTGEAALQPRDQPFATLDVTVHAGLLP 123
Query: 323 NRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETL 382
+RLRILYVDTIGF+S +P +L+ F TLED +D+++HV DVS+PD QK V TL
Sbjct: 124 SRLRILYVDTIGFLSQLPHSLIHAFSATLEDVAYSDVLVHVTDVSHPDAELQKATVLSTL 183
Query: 383 QHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKAT 442
+ L L +LE L V +KVD V PG L +SA G GL +LK ++ +L+AT
Sbjct: 184 RGLHLPPALLESALEVHSKVDLV-PGYTPPCSGALAVSAISGRGLDELKAALEASVLRAT 242
Query: 443 GRKNITMRVRSGGSEYQWLMKHTAVSNIRE-DDTSAEHLLLDVVMTDVIMNKFKHEF 498
GR+ +T+ VR GG + WL K V ++E + A H + VV+T +F+ F
Sbjct: 243 GRQVLTLCVRLGGPQLGWLYKEAVVQQVQELPEGDAAH--VTVVITQAAYGRFRKLF 297
>gi|281349230|gb|EFB24814.1| hypothetical protein PANDA_018854 [Ailuropoda melanoleuca]
Length = 263
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 116/265 (43%), Positives = 174/265 (65%), Gaps = 6/265 (2%)
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ F+ ++ + E+E K++KAL +LK +R ++ +++RQ+FP ++VVGYTNCGKTTLIKA
Sbjct: 2 ESFMQVQQRLFKEKEMKIRKALERLKKKRRLLGRQRRRQEFPVISVVGYTNCGKTTLIKA 61
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT DD + PR+QLFATLDVT H G LP+ + ++Y+DTIGF+S +P +L+E F TLED
Sbjct: 62 LTGDDGVQPRDQLFATLDVTAHAGWLPSCMAVIYMDTIGFLSQLPHSLIESFSATLEDMA 121
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEY 415
+D+I+HV DVS+P+ QK V L L L +L+ +L V NKVD V PG
Sbjct: 122 HSDLIVHVRDVSHPETELQKASVLSALHGLCLPAPLLDSMLEVHNKVDLV-PGYSPPGPQ 180
Query: 416 DLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDT 475
+ +SA G GL +LK +++D +L+ATGR+ +T+RVR G++ WL + + ++E D
Sbjct: 181 AVAVSALLGHGLLELKARLEDAVLRATGRQVLTLRVRLVGAQLSWLHRE---ATVQEVDV 237
Query: 476 SAEHLLLD--VVMTDVIMNKFKHEF 498
E + D VV++ KF+ F
Sbjct: 238 VPEAGVADVKVVISSSAYGKFRKLF 262
>gi|395757131|ref|XP_002834752.2| PREDICTED: putative GTP-binding protein 6-like, partial [Pongo
abelii]
Length = 264
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/267 (43%), Positives = 177/267 (66%), Gaps = 9/267 (3%)
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ F+ ++ +L E+E K++KAL++L+ +R ++R ++ R++FP ++VVGYTNCGKTTLIKA
Sbjct: 1 ESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPVISVVGYTNCGKTTLIKA 60
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT D ++ PR+QLFATLDVT H G LP+R+ +LYVDTIGF+S +P L+E F TLED
Sbjct: 61 LTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGLIESFSATLEDVA 120
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQ--HLELEEKILEHVLVVGNKVDAVPPGERVTE 413
+D+I+HV D+S+ + V TL+ L L +L+ ++ + NKVD V PG TE
Sbjct: 121 HSDLILHVRDISH-SRRSSECSVLSTLRGLQLPLPAPLLDSMVEIHNKVDLV-PGYSPTE 178
Query: 414 EYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVS--NIR 471
+ +SA RG GL +LK ++ +LKAT R+ +T+RVR G++ WL K V ++
Sbjct: 179 PNVVPVSALRGHGLQELKAELDAAVLKATRRQILTLRVRLAGAQLSWLYKEATVQEVDVI 238
Query: 472 EDDTSAEHLLLDVVMTDVIMNKFKHEF 498
+D +A+ + V+++D KF+ F
Sbjct: 239 PEDGAAD---VRVIISDSAYGKFRKLF 262
>gi|351714061|gb|EHB16980.1| Putative GTP-binding protein 6 [Heterocephalus glaber]
Length = 901
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 150/212 (70%), Gaps = 1/212 (0%)
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR 305
L E+E K+++AL +L+G+R ++R ++ R++FP V+V+GYTN GKT+LI+ALT+D + PR
Sbjct: 689 LKEKEMKIRRALEQLRGKRVLLRKQRTRREFPVVSVLGYTNSGKTSLIRALTEDPAAQPR 748
Query: 306 NQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVD 365
+QLFATLDVT H LP+R+ +LY+DT+GF+S +P +L++ F TLED AD+++HV D
Sbjct: 749 DQLFATLDVTAHGAWLPSRVPVLYMDTVGFLSQLPHSLIQSFSATLEDVAHADVLMHVRD 808
Query: 366 VSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGT 425
+S+P+ QQK V TL+ L L ++L+ +L V NKVD V PG E L +SA G
Sbjct: 809 ISHPESEQQKATVLSTLRGLRLPAQLLDSMLEVHNKVDLV-PGYSTAEPGALAVSARLGL 867
Query: 426 GLAQLKEKVQDMILKATGRKNITMRVRSGGSE 457
GL +L+ + +++ATGR+ +T+RV G +
Sbjct: 868 GLRELEASLDATVMEATGRRVLTLRVPLAGPQ 899
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 77/112 (68%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
++ +AE+ ALV ++ GW VV + ++ + KK FG+G+LE L ++R +T+VF++
Sbjct: 473 EWQVAEAAALVHTLDGWSVVQTVVVPTKTPHKKLIFGRGSLERLTERIRASPEITSVFLN 532
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYL 219
V+ + +K L+ + V VFDR+ IV+ IF+ +A+T+EA+LQ+A+AE+P L
Sbjct: 533 VERMASPTKKELEAAWAVEVFDRFTIVLHIFRCNARTKEAKLQVALAEIPLL 584
>gi|432856472|ref|XP_004068438.1| PREDICTED: putative GTP-binding protein 6-like [Oryzias latipes]
Length = 437
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/324 (36%), Positives = 198/324 (61%), Gaps = 15/324 (4%)
Query: 185 VPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYL-WTRYRTIEDATNMNITKGFLDSKR 243
V D + +V Q+ + KT E + YL +RY + T + ++
Sbjct: 125 VNTLDNWTVVDQLILS-TKTPEKKRIFGKGNFQYLTGSRYISGSGET-------LYEVQQ 176
Query: 244 MVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLV 303
+L ERE K++ AL KL+ +R ++R++++ ++FP V+V+GYTNCGKTTLIKALT D L
Sbjct: 177 RLLKEREAKIRSALEKLRRKRLLLRSQRKHREFPVVSVLGYTNCGKTTLIKALTGDSGLQ 236
Query: 304 PRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHV 363
PRNQLFATLDVT H G LP+ + +LYVDTIGF+S +P L++ F TLED +D+++HV
Sbjct: 237 PRNQLFATLDVTVHAGQLPSHMTVLYVDTIGFLSQLPHQLIDSFSATLEDIKHSDLLVHV 296
Query: 364 VDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATR 423
D+S+P+ Q+ +V L++L++ ++++ ++ V NK+D + E V + + ISA
Sbjct: 297 RDISHPETENQRVNVFRVLKNLQIPDRLMSSMIEVHNKIDLIDSYECVNPDV-IPISALE 355
Query: 424 GTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIR--EDDTSAEHLL 481
G GL +L++ V++ ILK+TG++ + +RV + WL + V +++ D+ SA +
Sbjct: 356 GRGLDKLRKAVEEEILKSTGKQVLALRVDLSSHQLSWLYREATVQDVQVNADEGSA---V 412
Query: 482 LDVVMTDVIMNKFKHEFISSRKRG 505
+ V++++ ++ +F S K G
Sbjct: 413 VKVIISNAAYGRYNKQFGSKLKTG 436
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 56 FSDNSQDDLEESD-----EFKTIRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFM 110
FS NS E+ D E I + +G ++F+V P +KWG + + TT + M
Sbjct: 58 FSCNSVAAGEDQDVPGDSEVDEIFQQQVPAGVGEGQRIFIVHPDVKWGSRKQHLTTAELM 117
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELL--KRQVRGDA 159
+AE+ LV+++ W VVD I+S + +KK FGKGN + L R + G
Sbjct: 118 MAEAVGLVNTLDNWTVVDQLILSTKTPEKKRIFGKGNFQYLTGSRYISGSG 168
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 16 GALGTDHQVFVIQPFIKWGKKMKRNTTRDFMLAESKALVKFSDN 59
+G ++F++ P +KWG + + TT + M+AE+ LV DN
Sbjct: 87 AGVGEGQRIFIVHPDVKWGSRKQHLTTAELMMAEAVGLVNTLDN 130
>gi|256073611|ref|XP_002573123.1| GTP-binding protein hflx [Schistosoma mansoni]
gi|353232489|emb|CCD79844.1| putative gtp-binding protein hflx [Schistosoma mansoni]
Length = 561
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 152/507 (29%), Positives = 234/507 (46%), Gaps = 98/507 (19%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTR-------DFMLAESKALVSSIQGWRVVDSTIISL--LS 136
H + ++QP IK G KR + D + E+ ALV S+ W V ++ +
Sbjct: 46 HDIVIIQPHIK-GALYKRINNKFPYLPKNDPNVDEAIALVDSLGFWTTVGVIFCNIKAAN 104
Query: 137 FDKKSFFGKGNLELLKRQVRG---------------------------DARVTAVFVSVD 169
++ FF KG + + V R TAV V+
Sbjct: 105 TNRGPFFSKGIWQNVSDSVIAYRDGKQSVQTADTLPNEENNTFSEHIVKKRATAVLVNWP 164
Query: 170 VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA 229
L Q ++Q + +PV+DRY +V+Q+F ++T EA+LQ +AE+ L R +
Sbjct: 165 RLTTLQLALMQQAWLIPVYDRYTLVVQLFSLRSRTPEAKLQAKLAEIGLLRARIPAFFET 224
Query: 230 TNMNITKGFLDSKRMVLMER--------EQKLKKALNKLKGQREMMRNKK----QRQKFP 277
NM K +D ER E L L K+ QR R ++ P
Sbjct: 225 PNM--IKRLIDRSDFATKERLIQILNQTEASLLNQLEKISKQRIHHRRNHRRDMEKHHLP 282
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEG---MLPNR---------- 324
VAVVGYTN GKT+LI+ L+ D L ++FATLD+T H +LPN+
Sbjct: 283 LVAVVGYTNAGKTSLIRYLSKSDKLTSSPEVFATLDITHHRSRLPILPNKTEENNMTSNQ 342
Query: 325 -------------------LRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVD 365
+++L +DTIGF+S++PT LL F+ TL++ + AD+I+H+VD
Sbjct: 343 LSSGNVSDGCCSSSIGLPGIQMLLLDTIGFMSDLPTNLLAAFRATLDECLDADLILHIVD 402
Query: 366 VSNPDYLQQKQHVDETLQHLEL------------EEKILE--HVLVVGNKVDAVPPGERV 411
VS P++ Q HV+E L + + + E VL +GNKVD + + V
Sbjct: 403 VSQPEWQLQVNHVEELLCSIGVLVTKSTNSGHTSDSNTFEPPQVLKIGNKVDRIGSND-V 461
Query: 412 TEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIR 471
+D LISA GTG+ +L KV+ I+K G + T+ VR GG +QW+ + V+++
Sbjct: 462 YTGFDALISAKNGTGMEELTSKVRLAIMKRLGWFSRTLDVRQGGPSFQWIYSNAMVTSVE 521
Query: 472 EDDTSAEHLLLDVVMTDVIMNKFKHEF 498
+++E L + + T V KF F
Sbjct: 522 ASPSNSERLRITAIFTPVGWIKFCRTF 548
>gi|358339904|dbj|GAA35393.2| putative GTP-binding protein 6 [Clonorchis sinensis]
Length = 574
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 235/512 (45%), Gaps = 99/512 (19%)
Query: 86 HQVFVVQPFIKWGKKMKR-----------NTTRDFMLAESKALVSSIQGWRVVDSTIISL 134
H V ++QP +K +R T E++ALV S++GW+ V + +L
Sbjct: 50 HSVLIIQPNVKHAALRRRFEVGLPSGPLGQRTVGPSEDEARALVDSLEGWKTVGTVSFAL 109
Query: 135 LSF---DKKSFFGKG-------------------------NLELLKRQVRGDAR--VTAV 164
+++ FF KG L + R G+ R TAV
Sbjct: 110 RGIVRGNRQRFFTKGVWEEVTKAVESYRSGQQDVNQEQKPGLSITSRHAIGEERPIATAV 169
Query: 165 FVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYR 224
FV+ L Q +Q+ + +PV+DRY +V+Q+F + A+++EAR+Q +AEL L R
Sbjct: 170 FVNWPRLSTLQVATMQNAWSLPVYDRYTLVVQLFTSRAQSQEARIQAQLAELSLLRARLP 229
Query: 225 TIEDATNMNITKGFLDSKRM-----VLMEREQKLKKALNKLKGQREMMRNKKQRQK---F 276
+ + + D +L E+E +L L++++ +R++ R ++ ++
Sbjct: 230 ALFTSHSGTTNTALYDDMSAQQLDRLLREKEARLLAELSEVERRRQLARQHRRSKRVHEL 289
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNR------------ 324
P V VVGYTN GKT+LI+ L+ Q+FATLD+T H LP
Sbjct: 290 PVVTVVGYTNAGKTSLIRCLSGSTKARSSPQVFATLDITHHRARLPTTSVIQDTLPEASQ 349
Query: 325 ------------LRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
+R L +DTIGF++++PT L+ F+ TLE+ + D+I+HV+DVS D+
Sbjct: 350 DAFNKKGTSLPGIRFLLLDTIGFMADLPTNLITAFRATLEECLDTDLILHVIDVSEEDWE 409
Query: 373 QQKQHVDETLQHLELEEKILE-----------------------HVLV-VGNKVDAV--P 406
++ HVD L H + + +E VL+ +GNKVD
Sbjct: 410 RRAAHVDNVLSHSGVPRQNIEGTACPASDSDLAIQRNQRMMPNPPVLIRIGNKVDLGLRH 469
Query: 407 PGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTA 466
E+ ++ D+L+SA TGL +L ++D ++ G T+ + G QW+ +
Sbjct: 470 VNEKNRQKLDVLVSANHWTGLDELTGLIKDQLIGRLGWFQRTITMSQGSPALQWIYSNAM 529
Query: 467 VSNIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
V+N+ D + L + + T + K +H +
Sbjct: 530 VTNVMADPADPQRLKVCAIFTPAVWQKLQHLY 561
>gi|167515980|ref|XP_001742331.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778955|gb|EDQ92569.1| predicted protein [Monosiga brevicollis MX1]
Length = 616
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 140/450 (31%), Positives = 225/450 (50%), Gaps = 47/450 (10%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+V V+QP K +++ L ES +L+ ++QG V+ ++ + +++FFGKG
Sbjct: 163 KVLVLQPDFK-DARLQGVRPPQLQLEESLSLIDAVQGLTAVEGEVVRMRELRERTFFGKG 221
Query: 147 NLELLKRQV-----RGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAH 201
L + +V RG V ++ L QQ+ LQ + +PV+DR+ +++ IF++
Sbjct: 222 KLVEVSARVHELKQRG---CDVVMINTSRLTPRQQEFLQKSWGLPVYDRFTVILAIFESR 278
Query: 202 AKTREARLQIAIAELPYLWTRY----------RTIEDATNMNITKGFLDSKRMVLMEREQ 251
A +R+A+LQ+ +A + Y R + T + L+ R L RE
Sbjct: 279 AVSRQAQLQVELARIEYERARLVLGLEAGYDRQGGHSGTLGGAGETELEHNRRRLQRREL 338
Query: 252 KLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFAT 311
++++ L R +R K + P VAVVGYTN GKT L+K LT D L P N+LFAT
Sbjct: 339 RIRELLRAADASRPSIR--KGTKDMPVVAVVGYTNAGKTALVKCLTHDAGLEPENKLFAT 396
Query: 312 LDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDY 371
LD TT G L + + L+VDT+GF++++P TL+E F+ TL D AD+++HV D ++PD
Sbjct: 397 LDTTTRAGKLTDGTQCLFVDTVGFVADLPPTLVEAFRSTLVDLAAADVLVHVTDATDPDR 456
Query: 372 LQQKQHVDETLQHLELEEKILEHVLVVGNKVD---------------AVPPGERVTEEY- 415
L Q V + L+ L L +LE + V NK+D V R E
Sbjct: 457 LDQHACVIDVLEGLGLSTALLESRICVHNKIDLREFDDTAAHQDLDVHVAGSSRAKRERA 516
Query: 416 --------DLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVR-SGGSEYQWLMKHTA 466
L IS RG L +L E++ + + GR + +R R G Q+L +H A
Sbjct: 517 AKLWRDHPALPISVHRGDNLEELLERITQAVQRQRGRVHRAVRFRIDQGDVLQYLHRHGA 576
Query: 467 VSNIREDDTSAEHLLLDVVMTDVIMNKFKH 496
V + + D H ++V+M+ +++ H
Sbjct: 577 VQD-HQVDADGLHQTVEVIMSADRLSQLVH 605
>gi|426394993|ref|XP_004065395.1| PREDICTED: LOW QUALITY PROTEIN: putative GTP-binding protein 6
[Gorilla gorilla gorilla]
Length = 348
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/228 (45%), Positives = 149/228 (65%), Gaps = 6/228 (2%)
Query: 273 RQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDT 332
R++ VGY++ GKTTLIKALT D ++ PR+QLFATLDVT H G LP+R+ +LYVDT
Sbjct: 123 RRRVSCGLCVGYSSHGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDT 182
Query: 333 IGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKIL 392
IGF+S +P L+E F TLED +D+I+HV DVS+P+ QK V TL+ L+L +L
Sbjct: 183 IGFLSQLPHGLIESFSATLEDVAHSDLILHVRDVSHPEAELQKCSVLSTLRGLQLPAPLL 242
Query: 393 EHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVR 452
+ ++ V NKVD V PG TE + +SA RG GL +LK ++ +LKATGR+ +T+RVR
Sbjct: 243 DSMVEVHNKVDLV-PGYSPTEPNVVPVSALRGHGLQELKAELDAAVLKATGRQILTLRVR 301
Query: 453 SGGSEYQWLMKHTAVS--NIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
G++ WL K V ++ +D +A+ + V++++ KF+ F
Sbjct: 302 LAGAQLSWLYKEATVQEVDVIPEDGAAD---VRVIISNSAYGKFRKLF 346
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 44/58 (75%)
Query: 232 MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGK 289
M + F+ ++ +L E+E K++KAL++L+ +R ++R ++ R++FP ++VVGYTNCG+
Sbjct: 1 MGSGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPVISVVGYTNCGE 58
>gi|238917198|ref|YP_002930715.1| GTP-binding protein HflX [Eubacterium eligens ATCC 27750]
gi|238872558|gb|ACR72268.1| GTP-binding protein HflX [Eubacterium eligens ATCC 27750]
Length = 413
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 180/330 (54%), Gaps = 17/330 (5%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G + V I + +F ++ GKG +E L+ + D + D L Q K L+D
Sbjct: 41 GAQTVGRMIQTRDNFHPATYIGKGKIEELRLMI--DELDATGIICDDELSPAQFKNLEDE 98
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNI 234
+ V DR M+++ IF A A + E ++Q+ +A+L Y R R
Sbjct: 99 LGIKVMDRTMVILDIFAARATSSEGKIQVEMAQLKYRSIRLAGFGTSMSRLGGGIGTRGP 158
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ +++ R ++ +R KL L +K R++ R+K+ + A+VGYTN GK+TL+
Sbjct: 159 GEKKIETDRRLIRDRISKLSADLKDMKEHRDVQRSKRAKTSTSVAAIVGYTNAGKSTLLN 218
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LTD ++ ++LFATLD TT LPN ++L DT+GFI +P L+E FK TLE+A
Sbjct: 219 KLTDA-GVLSEDKLFATLDPTTRSMELPNGEKVLLTDTVGFIRKLPHNLIEAFKSTLEEA 277
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP--PGER-V 411
ADII+HVVDVSNPDY QQ V TL+ L +E K V+ + NK D +P P + +
Sbjct: 278 KYADIIVHVVDVSNPDYEQQMSTVYATLKQLGVEGK---PVVTLFNKCDVLPEKPAAKDL 334
Query: 412 TEEYDLLISATRGTGLAQLKEKVQDMILKA 441
+Y ISA RG GL KE +Q++ILK+
Sbjct: 335 HADYTYNISAVRGNGLEAFKECLQEIILKS 364
>gi|339238731|ref|XP_003380920.1| putative GTP-binding protein 6 [Trichinella spiralis]
gi|316976131|gb|EFV59470.1| putative GTP-binding protein 6 [Trichinella spiralis]
Length = 512
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 203/397 (51%), Gaps = 28/397 (7%)
Query: 83 GTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRV--VDSTIISLLSFDKK 140
G +FV+QP + ++ T+ + + E+ LV S+ GW V V + + + +
Sbjct: 90 GVKKALFVLQPKVPKPDLLRLATSNESLEQEALQLVKSVPGWNVAGVYERYVKV-NRSRP 148
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
S GKG +E L VF++V L Q L F++PV+DRY + +QIFK
Sbjct: 149 SILGKGTIEELISYFTNLHHRDGVFLNVARLTPIQHFYLSCAFKMPVYDRYTVALQIFKH 208
Query: 201 HAKTREARLQIAIAELPYLWTRYRT-------IEDATNMNITKGFLDSK--RMVLMEREQ 251
+A ++EA+LQ A+AEL Y+ R + +++A + + + K R +L E+E
Sbjct: 209 YAISKEAKLQAALAELAYMKERLQPYINGEIDLKEAVKLGALQMKMPDKKRRKLLDEQEI 268
Query: 252 KLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFAT 311
++ L+KLK QR +R +R++ P +AV+GYTN +D + ++ FAT
Sbjct: 269 AIRGKLDKLKTQRHYLRQNTRRKQCPMIAVIGYTN----------AEDRRISSEDRFFAT 318
Query: 312 LDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLED-AMLADIIIHVVDVSNPD 370
LDVT H G LP RL +LY DT+GF S++P L+ F T+E+ A D ++HVVD S+
Sbjct: 319 LDVTVHHGQLPCRLDVLYADTVGFFSDLPMGLMPCFDATMEEIASSVDALLHVVDRSHES 378
Query: 371 YLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQL 430
+L Q+ V L L +EHV+ V NK D + T LLIS G G+ +L
Sbjct: 379 WLSQRLIVVHNLNKLN-----VEHVIEVWNKCDKLNEIPNSTASQALLISCLNGEGIDEL 433
Query: 431 KEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
K +++ IL ++T+ V G L AV
Sbjct: 434 KMQIEREILNLCNFHHVTLEVPITGDYINQLYNVAAV 470
>gi|409400612|ref|ZP_11250632.1| GTP-binding protein HflX [Acidocella sp. MX-AZ02]
gi|409130430|gb|EKN00196.1| GTP-binding protein HflX [Acidocella sp. MX-AZ02]
Length = 426
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/400 (33%), Positives = 208/400 (52%), Gaps = 25/400 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
LAE+ L +SI G +V I L S + GKG +EL +RG A+V V +
Sbjct: 35 LAEAVGLAASI-GLVIVHEQIFQLRSLTPATLLGKGQVELAATALRG-AQVDVAVVDAAL 92
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
+ QQ+ L+ F V DR +++ IF A A+TRE LQ+ +A L Y R R + T
Sbjct: 93 TPV-QQRNLEKAFGTKVIDRTGLILDIFGARARTREGSLQVELAHLEY--QRSRLVRSWT 149
Query: 231 NMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +G +++ R ++ +R KLK L +++ R + R +++ +P V
Sbjct: 150 HLERQRGGFGFLGGPGETQIEADRRLIGDRIVKLKAELEEVRRTRGLHRGARKKVPYPVV 209
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL ALT +++ +QLFATLD T +LP+ I+ DT+GFIS +
Sbjct: 210 ALVGYTNAGKSTLFNALTGA-TVMAEDQLFATLDPTMRGLVLPSGRNIILSDTVGFISEL 268
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLE----LEEKILEHV 395
PT L+ F+ TLE+ AD+++HV D+S+PD Q + V L + L+E H
Sbjct: 269 PTELVAAFRATLEEVAEADLLLHVRDISHPDTEAQARDVRAVLTRMAKEGTLDEGWPSHT 328
Query: 396 LVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGG 455
L V NK DA+ V + + +SA G GL +L + + + A + + V G
Sbjct: 329 LEVLNKADALGGIANVVQGEGIAVSALTGEGLDRLLQTIDARLAAAEQLVELQVPVED-G 387
Query: 456 SEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFK 495
+ WL +H V REDD H+ L V ++ V +F+
Sbjct: 388 ARLAWLYRHGEVVA-REDDE--HHVTLQVRLSAVDKARFE 424
>gi|402770792|ref|YP_006590329.1| GTP-binding protein, HflX [Methylocystis sp. SC2]
gi|401772812|emb|CCJ05678.1| GTP-binding protein, HflX [Methylocystis sp. SC2]
Length = 443
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/409 (32%), Positives = 212/409 (51%), Gaps = 36/409 (8%)
Query: 83 GTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSF 142
G + V+ P++ G + R+T M E+ L +I VV +SL ++
Sbjct: 5 GAGARALVIGPYLAQGAALSRDTAARLM--EAVGLAEAID-LDVVGQVPVSLNEVRPATY 61
Query: 143 FGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAH 201
GKG +E + V+ A VS+D L QQ+ L+ + V DR ++++IF
Sbjct: 62 LGKGKVEEIGELVKSK---DAALVSMDCQLSPVQQRNLERAWDAKVIDRTGLILEIFGER 118
Query: 202 AKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMERE 250
A+T+E LQ+ +A L Y + R + T++ +G +++ R ++ ER
Sbjct: 119 ARTKEGALQVELAHLAY--QKSRLVRSWTHLERQRGGFGFLGGPGETQIETDRRLIEERM 176
Query: 251 QKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFA 310
++++ L+K+K R + R ++ +P VA+VGYTN GK+TL LT + L ++ LFA
Sbjct: 177 RRIEHDLDKVKRTRALHRKTRRDIPYPVVALVGYTNAGKSTLFNRLTKAEVLA-QDMLFA 235
Query: 311 TLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPD 370
TLD T + LP+ RIL DT+GFIS++PT L+ F+ TLE+ LAD+++HV DV++ D
Sbjct: 236 TLDPTLRQIKLPHGARILLSDTVGFISDLPTMLVSAFRATLEEVTLADVVLHVRDVAHED 295
Query: 371 YLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT-----------EEYDLLI 419
+ Q + V+ L L L + VL V NK+DA+ P ER++ + L+
Sbjct: 296 WEAQAKDVEAILSELGLTGEAEGRVLEVWNKIDALDP-ERLSALQHAVSGIEPQRRPTLV 354
Query: 420 SATRGTGLAQLKEKVQDMILKATGRKNITMRVR-SGGSEYQWLMKHTAV 467
SA G GL +L +++ + A GR M + + G WL HT V
Sbjct: 355 SALTGQGLDELLARIESAL--AAGRVRFEMDLDVADGEGLAWLHAHTEV 401
>gi|406989154|gb|EKE08965.1| hypothetical protein ACD_16C00232G0025 [uncultured bacterium]
Length = 435
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/413 (31%), Positives = 212/413 (51%), Gaps = 30/413 (7%)
Query: 88 VFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGN 147
VF++ P+I G R + L E++ L +IQ V + ++ KG+
Sbjct: 18 VFIICPYIIKG--THRIIEPEARLEEARGLAEAIQ-LDVKGEEFFKQHTIRPSTYISKGH 74
Query: 148 LELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREA 207
+E LK ++ V VF+ + + QQ+ L+ ++ V DR ++++IF A A+T E
Sbjct: 75 VEELKGPIKA-LDVKLVFIDAAISPV-QQRNLEKIWNCKVIDRTGLILEIFGARARTAEG 132
Query: 208 RLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKA 256
RLQ+ +A L Y R R + T++ +G L+ R ++ ER ++KK
Sbjct: 133 RLQVELAALTY--QRSRLVRSWTHLERQRGGLGFIGGPGETQLELDRRLIDERIMRIKKD 190
Query: 257 LNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTT 316
L+K++ R + R ++R +P VA+VGYTN GK+TL LT ++ N LFATLD T
Sbjct: 191 LHKVQQTRTLHRKARKRVPYPVVALVGYTNAGKSTLFNRLTQA-GVMAENILFATLDPTM 249
Query: 317 HEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQ 376
LP+R I+ DT+GFIS +PT L+ F+ TLE+ M AD+I+HV DVS+P+ Q++
Sbjct: 250 RRVTLPSRREIILSDTVGFISELPTLLVAAFRATLEEVMEADLILHVRDVSHPESKSQQE 309
Query: 377 HVDETLQHLELEEKILEHVLVVGNKVDAV---------PPGERVTEEYDLLISATRGTGL 427
V + L LE+ EH + V NK D + +R L+SA G+G+
Sbjct: 310 DVLNVIAELGLEKAYEEHGIEVLNKADLLTRQNYKFLNTQAKRAANPPQCLVSALNGSGI 369
Query: 428 AQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHL 480
+L + + + + ++ V + G + WL H V ++DDT A HL
Sbjct: 370 EELLAHIDTFLARKDKPYSFSLPV-AEGKKIAWLYAHGEVVERKDDDTHA-HL 420
>gi|372281079|ref|ZP_09517115.1| small GTP-binding protein [Oceanicola sp. S124]
Length = 424
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 138/427 (32%), Positives = 219/427 (51%), Gaps = 32/427 (7%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ FV+ P K G++ + + LAE+ +L ++ G VV ++ + + K+ FGKG
Sbjct: 10 RAFVIHPEFK-GEEARHAPL--YALAEAVSLAHALPGLEVVGDQLVRISTVQPKTLFGKG 66
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
+E LK Q +A V + V QQ+ L+ + V + DR ++++IF A+TRE
Sbjct: 67 KVEELK-QTLAEAEAELVLIDGPV-SPKQQQNLEKAWNVKILDRTGLILEIFSDRARTRE 124
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKK 255
LQ+ +A L Y R R + T++ +G +++ R + E+ +L++
Sbjct: 125 GVLQVELAALGY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDEQMVRLRR 182
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L+K+ RE+ R + + FP VA+VGYTN GK+TL LT D L ++ LFATLD T
Sbjct: 183 QLDKVVKTRELHRASRAKVPFPIVALVGYTNAGKSTLFNLLTGADVLA-KDMLFATLDPT 241
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
L I+ DT+GFIS++P L+ F+ TLE+ + AD+++HV D+S+P+ +QK
Sbjct: 242 MRRVKLETGAEIILSDTVGFISDLPHQLVAAFRATLEEVLEADLVLHVRDISHPETREQK 301
Query: 376 QHVDETLQHLELEEKILEHVLVVGNKVDAVP--PGERVT-----EEYDLLISATRGTGLA 428
V+E L L L E++ VL V NK+D +P ER+ +E L ISA G GL
Sbjct: 302 ADVEEILAELGLREEV--PVLEVWNKIDLLPEEESERLLTASERDEQILPISAITGAGLP 359
Query: 429 QLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTD 488
L +V + + + + S G W K V R+ D E LDV+ T
Sbjct: 360 ALLAEVTRALDSERHAETVLLPF-SDGKRRAWAFKEGIVQAERQTDAGFE---LDVLWTA 415
Query: 489 VIMNKFK 495
+F+
Sbjct: 416 RQSARFR 422
>gi|338732604|ref|YP_004671077.1| GTP-binding protein hflX [Simkania negevensis Z]
gi|336481987|emb|CCB88586.1| GTP-binding protein hflX [Simkania negevensis Z]
Length = 435
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 169/294 (57%), Gaps = 18/294 (6%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G+ VV L + ++ GKG +E L Q D V + D + +QQ+ L+ +
Sbjct: 51 GFEVVSKNPCPLRKIEASTYIGKGKIEEL--QAAADESKADVVIFDDEISPNQQRNLEKI 108
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNIT--KGFLD 240
F+ PV DR ++++IF A+TREA+LQ+ +A+ Y R + + + + KGFL
Sbjct: 109 FKRPVIDRTELILEIFSQRAQTREAKLQVELAKSHYQLPRLKRLWTHLSRQVASGKGFLK 168
Query: 241 S---------KRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTT 291
+RMV +R +LK + +++ QR++ R+ + R PT A++GYTN GK+T
Sbjct: 169 GAGERQIELDRRMV-RDRISRLKNEIEEVRHQRDVQRHARIRSGVPTFAIIGYTNVGKST 227
Query: 292 LIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTL 351
L+ ALT + L+ ++LFATLD TT + LPN IL +DT+GFI IP TL+ FK TL
Sbjct: 228 LLHALTQAEVLI-EDKLFATLDTTTRKFTLPNHQEILLIDTVGFIRKIPHTLVAAFKSTL 286
Query: 352 EDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV 405
E+AM DI++H+VD+++P + + E L+ L E K + + V NK+DA+
Sbjct: 287 EEAMYTDILLHLVDINHPLAEEHAESTYEVLKELGAEGKPM---ITVLNKIDAI 337
>gi|397470751|ref|XP_003846103.1| PREDICTED: LOW QUALITY PROTEIN: putative GTP-binding protein 6 [Pan
paniscus]
Length = 417
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 128/185 (69%), Gaps = 1/185 (0%)
Query: 273 RQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDT 332
R++ VGY++ GKTTLIKALT D ++ PR+QLFATLDVT H G LP+R+ +LYVDT
Sbjct: 232 RRRVSCGLCVGYSSHGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDT 291
Query: 333 IGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKIL 392
IGF+S +P L+E F TLED +D+I+HV D+S+P+ QK V TL+ L+L +L
Sbjct: 292 IGFLSQLPHGLIESFSATLEDVAHSDLILHVRDISHPEAELQKCSVLSTLRGLQLPAPLL 351
Query: 393 EHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVR 452
+ ++ V NKVD V PG TE + +SA RG GL +LK ++ +LKATGR+ +T+RVR
Sbjct: 352 DSMVEVHNKVDLV-PGYSPTEPNVVPVSALRGHGLQELKAELDAAVLKATGRQILTLRVR 410
Query: 453 SGGSE 457
G++
Sbjct: 411 LAGAQ 415
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 109/167 (65%), Gaps = 8/167 (4%)
Query: 131 IISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDR 190
++S + D+K FGKGN E L ++RG +T VF++V+ + +K L+ + V VFDR
Sbjct: 2 VVSTKTPDRKLIFGKGNFEHLTEKIRGSPDITCVFLNVERMAAPTKKELEAAWGVEVFDR 61
Query: 191 YMIVIQIFKAHAKTREARLQIAIAELPYLWTR--------YRTIEDATNMNITKGFLDSK 242
+ +V+ IF+ +A+T+EARLQ+A+AE+P + YR + M + F+ +
Sbjct: 62 FTVVLHIFRCNARTKEARLQVALAEIPLHRSNLKRDVAHLYRGVGSRYIMGSGESFMQLQ 121
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGK 289
+ +L E+E K++KAL++L+ +R ++R ++ R++FP ++VVGYTNCG+
Sbjct: 122 QRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPMISVVGYTNCGE 168
>gi|339022397|ref|ZP_08646343.1| GTP-binding GTPase HflX/HSR1 [Acetobacter tropicalis NBRC 101654]
gi|338750587|dbj|GAA09647.1| GTP-binding GTPase HflX/HSR1 [Acetobacter tropicalis NBRC 101654]
Length = 438
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 197/382 (51%), Gaps = 23/382 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E+ L +SI G +V ++ + + + G G ++ LK V+ D V V
Sbjct: 37 LEEAVGLAASI-GLVIVRQAVLLVRAKRSATLLGSGQVDSLKVAVKADK--IDVLVVDAR 93
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT-- 221
L QQ+ L+ F V DR +++ IF A A T+E LQ+ +A L Y LWT
Sbjct: 94 LTPGQQRNLETEFGCKVIDRTGLILDIFGARAATKEGTLQVELAHLEYQRSRLVRLWTHL 153
Query: 222 -RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
R R +RM+ +R +LKK L +++ R + R ++R FP VA
Sbjct: 154 ERQRGGFGFLGGPGETQIEADRRMI-GDRIVRLKKELEQVRRTRGLHRQARKRVPFPVVA 212
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+VGYTN GK+TL ALT ++ ++QLFATLD T LP+ RI+ DT+GFIS++P
Sbjct: 213 LVGYTNAGKSTLFNALTGA-TVYAKDQLFATLDPTMRAITLPSGRRIILSDTVGFISDLP 271
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLE----LEEKILEHVL 396
T L+ F+ TLE+ ADII+HV D+++PD QK+ V L + +E ++
Sbjct: 272 TELIAAFRATLEEVAEADIILHVRDIAHPDSAAQKKDVFGVLDGMARDDMIESDWASRMI 331
Query: 397 VVGNKVDAVPPGERVTEEYD-LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVR-SG 454
V NK D + + V + D + ISA G GL L + + I + +N+ RV S
Sbjct: 332 EVMNKADLLGGPDAVPQTEDTVAISAITGDGLPALMDVIDRRI--TSSMENVRYRVPLSD 389
Query: 455 GSEYQWLMKHTAVSNIREDDTS 476
G+ WL +H V++ ++DDT
Sbjct: 390 GAASAWLYQHGEVTDRQDDDTC 411
>gi|330993264|ref|ZP_08317200.1| GTP-binding protein hflX [Gluconacetobacter sp. SXCC-1]
gi|329759666|gb|EGG76174.1| GTP-binding protein hflX [Gluconacetobacter sp. SXCC-1]
Length = 436
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 219/424 (51%), Gaps = 30/424 (7%)
Query: 94 FIKWGKKMKRNTTR--DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELL 151
+ W + + + R + L E+ L +SI G VV ++ L + + G G +E L
Sbjct: 15 ILPWERPDRHDDARAAEARLEEAVGLAASI-GLVVVCQAVLLLRARRPATLLGGGQVESL 73
Query: 152 KRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQI 211
K V+ D +T V + + + QQ+ L+ V DR +++ IF A TRE LQ+
Sbjct: 74 KETVKAD-NITVVIIDSRLTPV-QQRNLERALGCKVIDRTALILDIFGERAATREGTLQV 131
Query: 212 AIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKL 260
+A L Y R R + T++ +G +++ R ++ +R +LK+ L ++
Sbjct: 132 ELAHLEY--QRSRLVRTWTHLERQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQV 189
Query: 261 KGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGM 320
+ R + R ++R FP VA+VGYTN GK+TL ALT S+ ++QLFATLD T
Sbjct: 190 RRTRGLHRQARRRVPFPIVALVGYTNAGKSTLFNALTGA-SVYAQDQLFATLDPTMRGIQ 248
Query: 321 LPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDE 380
LP+ R++ DT+GFIS++PT L+ F+ TLE+ ADII+HV DVS+PD Q+Q V E
Sbjct: 249 LPSGRRVILSDTVGFISDLPTELIAAFRATLEEVAEADIILHVRDVSHPDSASQRQDVIE 308
Query: 381 TLQHLE----LEEKILEHVLVVGNKVDAVPPGERV-TEEYDLLISATRGTGLAQLKEKVQ 435
L+ + +EE V+ V NK D V E V +++ISA G GL L +
Sbjct: 309 VLEGMARNGTIEEDWQGRVIEVLNKADLVGGREAVGARPGNVVISAITGDGLPDLLAAID 368
Query: 436 DMILKATGRKNITMRVR-SGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKF 494
+ + +A + RV + G+ WL +H V+ + + A+ + V ++ +F
Sbjct: 369 ERMTRAM--EVALYRVPLAEGAAMAWLYEHGEVTARTDGEQGAD---MTVRLSPANRARF 423
Query: 495 KHEF 498
+ +F
Sbjct: 424 EMQF 427
>gi|84501097|ref|ZP_00999332.1| GTP-binding protein HflX [Oceanicola batsensis HTCC2597]
gi|84391164|gb|EAQ03582.1| GTP-binding protein HflX [Oceanicola batsensis HTCC2597]
Length = 424
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 200/383 (52%), Gaps = 26/383 (6%)
Query: 103 RNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVT 162
R +F L E+ +L ++ G VV S+I+ L + + FG G + L D +V
Sbjct: 23 RRHAAEFALEEAVSLARALPGLEVVGSSIVRLANPTPATLFGSGKVAELS-AFFADNKVE 81
Query: 163 AVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTR 222
V V V + QQ+ L+ + + DR ++++IF A+TRE LQ+ +A L Y R
Sbjct: 82 LVLVDGPVTPV-QQRNLEKAWGGKLLDRTGLILEIFSDRARTREGVLQVEMAALAY--QR 138
Query: 223 YRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKK 271
R + T++ +G +++ R + E+ +L++ L K+ RE+ R +
Sbjct: 139 TRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDEQLTRLRRQLEKVVRTRELHRAAR 198
Query: 272 QRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNR-LRILYV 330
R FP VA+VGYTN GK+TL LT + L ++ LFATLD T LPN ++
Sbjct: 199 ARVPFPIVALVGYTNAGKSTLFNRLTGAEVLA-KDMLFATLDPTMRRVRLPNNGPEVILS 257
Query: 331 DTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEK 390
DT+GFIS++PT L+ F+ TLE+ + AD+I+H+ D+S+P+ +QK V++ L L L E+
Sbjct: 258 DTVGFISDLPTQLVAAFRATLEEVLEADLILHIRDISHPEAEEQKADVEDILSDLGLPEE 317
Query: 391 ILEHVLVVGNKVDAVPP------GERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGR 444
+ VL V NKVD +PP R + +ISA G GL L + V+ + + +
Sbjct: 318 V--PVLEVWNKVDRLPPEDAGALARRAERDGTFVISAVTGAGLDPLLDAVERTLDQGSVT 375
Query: 445 KNITMRVRSGGSEYQWLMKHTAV 467
+ +T+ G WL + V
Sbjct: 376 EELTLGFDE-GRRRAWLYEQGLV 397
>gi|162148045|ref|YP_001602506.1| GTP-binding protein hflX [Gluconacetobacter diazotrophicus PAl 5]
gi|161786622|emb|CAP56204.1| GTP-binding protein hflX [Gluconacetobacter diazotrophicus PAl 5]
Length = 428
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 209/407 (51%), Gaps = 36/407 (8%)
Query: 94 FIKWGKKMKRNTTR--DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELL 151
+ W + ++ R + L E+ L +SI G +V ++ L + + G G +E L
Sbjct: 11 ILPWERPDRQEEVRAAEARLEEAVGLAASI-GLVIVRQAVLVLRARRPSTLLGNGQVESL 69
Query: 152 KRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQI 211
+ V+ D RV V V L QQ+ L+ V DR +++ IF A T+E LQ+
Sbjct: 70 RAAVQQD-RVAVVIVD-SRLSPVQQRNLERALGCKVIDRTALILDIFGERAATKEGTLQV 127
Query: 212 AIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKL 260
+A L Y R R + T++ +G +++ R ++ +R +LK+ L ++
Sbjct: 128 ELAHLEY--QRSRLVRTWTHLERQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQV 185
Query: 261 KGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGM 320
+ R + R ++R FP VA+VGYTN GK+TL ALT ++ ++QLFATLD T
Sbjct: 186 RRTRGLHRAARRRVPFPVVALVGYTNAGKSTLFNALTGA-TVFAQDQLFATLDPTMRGIR 244
Query: 321 LPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDE 380
LP+ RI+ DT+GFIS++PT L+ F+ TLE+ AD+I+HV D+S+PD Q+ V++
Sbjct: 245 LPSGRRIILSDTVGFISDLPTELIAAFRATLEEVAEADVILHVRDISHPDSAAQRADVED 304
Query: 381 TLQHLE----LEEKILEHVLVVGNKV------DAVPPGERVTEEYDLLISATRGTGLAQL 430
L+ + LE+ V+ V NK DAVPP + ++ISA G GL L
Sbjct: 305 VLEGMAGSGTLEDDWRRRVIEVQNKADLIGGRDAVPP-----RKGSVVISAITGEGLPDL 359
Query: 431 KEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSA 477
+ + +A T+ V+ G+ WL H V++ RED A
Sbjct: 360 LAAIDSRLTEAMETVRYTIPVKD-GAMLAWLYAHGEVTS-REDGEQA 404
>gi|209542663|ref|YP_002274892.1| GTP-binding proten HflX [Gluconacetobacter diazotrophicus PAl 5]
gi|209530340|gb|ACI50277.1| GTP-binding proten HflX [Gluconacetobacter diazotrophicus PAl 5]
Length = 436
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 209/407 (51%), Gaps = 36/407 (8%)
Query: 94 FIKWGKKMKRNTTR--DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELL 151
+ W + ++ R + L E+ L +SI G +V ++ L + + G G +E L
Sbjct: 19 ILPWERPDRQEEVRAAEARLEEAVGLAASI-GLVIVRQAVLVLRARRPSTLLGNGQVESL 77
Query: 152 KRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQI 211
+ V+ D RV V V L QQ+ L+ V DR +++ IF A T+E LQ+
Sbjct: 78 RAAVQQD-RVAVVIVD-SRLSPVQQRNLERALGCKVIDRTALILDIFGERAATKEGTLQV 135
Query: 212 AIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKL 260
+A L Y R R + T++ +G +++ R ++ +R +LK+ L ++
Sbjct: 136 ELAHLEY--QRSRLVRTWTHLERQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQV 193
Query: 261 KGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGM 320
+ R + R ++R FP VA+VGYTN GK+TL ALT ++ ++QLFATLD T
Sbjct: 194 RRTRGLHRAARRRVPFPVVALVGYTNAGKSTLFNALTGA-TVFAQDQLFATLDPTMRGIR 252
Query: 321 LPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDE 380
LP+ RI+ DT+GFIS++PT L+ F+ TLE+ AD+I+HV D+S+PD Q+ V++
Sbjct: 253 LPSGRRIILSDTVGFISDLPTELIAAFRATLEEVAEADVILHVRDISHPDSAAQRADVED 312
Query: 381 TLQHLE----LEEKILEHVLVVGNKV------DAVPPGERVTEEYDLLISATRGTGLAQL 430
L+ + LE+ V+ V NK DAVPP + ++ISA G GL L
Sbjct: 313 VLEGMAGSGTLEDDWRRRVIEVQNKADLIGGRDAVPP-----RKGSVVISAITGEGLPDL 367
Query: 431 KEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSA 477
+ + +A T+ V+ G+ WL H V++ RED A
Sbjct: 368 LAAIDSRLTEAMETVRYTIPVKD-GAMLAWLYAHGEVTS-REDGEQA 412
>gi|300744003|ref|ZP_07073023.1| GTP-binding protein [Rothia dentocariosa M567]
gi|300380364|gb|EFJ76927.1| GTP-binding protein [Rothia dentocariosa M567]
Length = 593
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 182/346 (52%), Gaps = 25/346 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+D + L D +F G G LK V T + S L Q
Sbjct: 174 AALAETAGSEVLDGLVQRRLKPDPGTFLGSGKALELKDIVEATGADTVIVDSE--LAPSQ 231
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI--------- 226
++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L Y+ R R
Sbjct: 232 RRALEDIVKVKVIDRTALILDIFAQHAKSREGKAQVELAQLEYMLPRLRGWGASLSRQAG 291
Query: 227 -EDATNMNI-TKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
A+ I ++G ++K R L R KLK+ + + RE R ++R + P+VA
Sbjct: 292 GRAASGEGIGSRGPGETKIEMDRRRLRARMAKLKREIAAMAPARETKRLSRKRNRVPSVA 351
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+ GYTN GK++L+ LTD LV N LFATLD T + P+ + DT+GF+ ++P
Sbjct: 352 IAGYTNAGKSSLLNRLTDAGVLV-ENALFATLDPTVRKAQTPDGIGYTLSDTVGFVRSLP 410
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
T L+E F+ TLE+ AD+I+HVVD S+PD Q + V E + L+ +I E ++V N
Sbjct: 411 TQLVEAFRSTLEEVADADVILHVVDASHPDPEGQVRAVREVIADLDA-RRIPE--IIVLN 467
Query: 401 KVDAVPP----GERVTEEYDLLISATRGTGLAQLKEKVQDMILKAT 442
K DA P R E +++SA G G+ +LK+K+ D I + +
Sbjct: 468 KADAADPFILERMRQREPNHVIVSARTGEGIGELKQKIADTIPRPS 513
>gi|378550830|ref|ZP_09826046.1| hypothetical protein CCH26_12114 [Citricoccus sp. CH26A]
Length = 520
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 183/347 (52%), Gaps = 31/347 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D I + D +F GKG E L+ V A A V VD L
Sbjct: 119 AALAETAGSEVLDGLIQRRHTPDPATFLGKGKAEELRDIV---AMTGADTVVVDSELAPS 175
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HAK+RE R Q+ +A+L YL R R ++ +
Sbjct: 176 QRRALEDVVRVKVIDRTALILDIFAQHAKSREGRAQVELAQLEYLLPRLRGWGESMSRQA 235
Query: 235 -----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
TK LD +R + R KL++ + +K RE R ++R + P
Sbjct: 236 GGRAAAGEGIGSRGPGETKIELDRRR--IRTRMAKLRREIAAMKPARETKRANRRRNRVP 293
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+VA+ GYTN GK++L+ LT LV N LFATLD T + + P+ + DT+GF+
Sbjct: 294 SVAIAGYTNAGKSSLLNRLTHAGVLV-ENALFATLDPTVRKAVTPDGIGYTLSDTVGFVR 352
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
++PT L+E F+ TLE+ AD+I+HVVD S+PD Q V L E++ + + ++V
Sbjct: 353 SLPTQLVEAFRSTLEEVADADVILHVVDASHPDPEGQIAAVRTVLA--EVDARRIPEIIV 410
Query: 398 VGNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
+ NK DA P R E +++SA G G+A+L+ + D I +
Sbjct: 411 L-NKADAADPVAIARLRQREPRSVVVSARTGEGIAELERAIADAIPR 456
>gi|383809941|ref|ZP_09965453.1| GTP-binding protein HflX [Rothia aeria F0474]
gi|383447261|gb|EID50246.1| GTP-binding protein HflX [Rothia aeria F0474]
Length = 550
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 183/346 (52%), Gaps = 25/346 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+D + L D +F G G LK V+ T + S L Q
Sbjct: 132 AALAETAGSEVLDGLVQRRLKPDPGTFLGSGKALELKDIVQATGADTVIVDSE--LAPSQ 189
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI--------- 226
++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L Y+ R R
Sbjct: 190 RRALEDIVKVKVIDRTALILDIFAQHAKSREGKAQVELAQLEYMLPRLRGWGASLSRQAG 249
Query: 227 -EDATNMNI-TKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
A+ I ++G ++K R L R KLK+ + + RE R ++R + P+VA
Sbjct: 250 GRAASGEGIGSRGPGETKIEMDRRRLRARMAKLKREIAAMAPARETKRLNRKRNRVPSVA 309
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+ GYTN GK++L+ LTD LV N LFATLD T + P+ + DT+GF+ ++P
Sbjct: 310 IAGYTNAGKSSLLNRLTDAGVLV-ENALFATLDPTVRKAQTPDGIGYTLSDTVGFVRSLP 368
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
T L+E F+ TLE+ AD+I+HVVD S+PD Q + V E + L+ +I E ++V N
Sbjct: 369 TQLVEAFRSTLEEVADADVILHVVDASHPDPEGQIRAVREVIADLDA-RRIPE--IIVLN 425
Query: 401 KVDAVPP----GERVTEEYDLLISATRGTGLAQLKEKVQDMILKAT 442
K DA P R E +++SA G G+ +LK+K+ D I + +
Sbjct: 426 KADAADPFILERMRQREPNHIIVSARTGEGIDELKQKIADTIPRPS 471
>gi|308484324|ref|XP_003104362.1| hypothetical protein CRE_22870 [Caenorhabditis remanei]
gi|308258010|gb|EFP01963.1| hypothetical protein CRE_22870 [Caenorhabditis remanei]
Length = 731
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 198/406 (48%), Gaps = 54/406 (13%)
Query: 73 IRDEAQTGALGTDHQ--VFVVQPFIKWGKKMKRNTTR-DFMLAESKALVSSIQGWRVVDS 129
I D A T + + Q V VV P ++WG + D L E+ ALV+++ VDS
Sbjct: 3 IADVATTSSKFANGQWSVLVVHPKVRWGSGSASVLKQADRQLEEAVALVNNLPNMIAVDS 62
Query: 130 TIISL-LSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVF 188
I+ + + +KS GNLE L + R AR TA+ V+VDVL QQ+ L +F+VP+F
Sbjct: 63 LIMPVDYNTKRKSIGATGNLEKLVAR-RETARATALMVNVDVLSPAQQEELFGIFEVPIF 121
Query: 189 DRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIE-------------DATNMNIT 235
DRY IV+ FK A+T EARLQI++AE+PY+ R + + I
Sbjct: 122 DRYNIVLSTFKEFARTDEARLQISLAEIPYIKHRIHALASKRLNSRPEILHVEQQCAEIE 181
Query: 236 KGFLDSKRMVLMEREQKLKKALNKL--KGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLI 293
G L+ +L +R Q L++ L + + + K +AVVGYTN GKT+L+
Sbjct: 182 GGDLNE---ILRKRGQDLRRNLKEATRRATEQQSGGSKHSSDAAVIAVVGYTNAGKTSLV 238
Query: 294 KALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLED 353
K LT +SL P++QLFATLD T H LP+ ++ DTIGF+S++P L+ F+ TL
Sbjct: 239 KRLTGAESLKPKDQLFATLDTTRHVAKLPSGRSTVFTDTIGFLSDLPIHLIAAFEATLAH 298
Query: 354 AMLADIIIHVVDVSN--PDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERV 411
A +IHV+ + P + D + H EL K ++H V + V
Sbjct: 299 VKSAVNMIHVLLLLLLFPSTINTVTQDDAS--HYELLPKSIQHDAAVWSAV--------- 347
Query: 412 TEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSE 457
L+ M+L G N TMR++ SE
Sbjct: 348 ------------------LRNSQNMMMLNVVGMTNSTMRIQIDNSE 375
>gi|255326352|ref|ZP_05367436.1| small GTP-binding protein [Rothia mucilaginosa ATCC 25296]
gi|255296569|gb|EET75902.1| small GTP-binding protein [Rothia mucilaginosa ATCC 25296]
Length = 570
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 181/346 (52%), Gaps = 25/346 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+D + L D +F G G LK V T + S L Q
Sbjct: 142 AALAETAGSEVLDGLVQRRLKPDPGTFLGSGKALELKDIVEATGADTVIVDSE--LAPSQ 199
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYR----------- 224
++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L Y+ R R
Sbjct: 200 RRALEDIVKVKVIDRTALILDIFAQHAKSREGKAQVELAQLEYMLPRLRGWGASLSRQAG 259
Query: 225 TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
A ++G ++K R L R KLK+ + + RE R ++R + P+VA
Sbjct: 260 GRAAAGEGIGSRGPGETKIEMDRRRLRARMAKLKREIAAMAPARETKRLNRRRNRVPSVA 319
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+ GYTN GK++L+ LTD LV N LFATLD T + P+ + DT+GF+ ++P
Sbjct: 320 IAGYTNAGKSSLLNRLTDAGVLV-ENALFATLDPTVRKAQTPDGIGYTLSDTVGFVRSLP 378
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
T L+E F+ TLE+ AD+I+HVVD S+PD Q + V E + E++ + + ++V+ N
Sbjct: 379 TQLVEAFRSTLEEVADADVILHVVDASHPDPEGQIRAVREVIA--EVDARHIPEIIVL-N 435
Query: 401 KVDAVPP----GERVTEEYDLLISATRGTGLAQLKEKVQDMILKAT 442
K DA P R E +++SA G G+ +LK+K+ D I + +
Sbjct: 436 KADAADPFVLERMRQREPEHVIVSARTGEGIEELKQKIADTIPRPS 481
>gi|349699566|ref|ZP_08901195.1| GTP-binding GTPase [Gluconacetobacter europaeus LMG 18494]
Length = 436
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 209/399 (52%), Gaps = 28/399 (7%)
Query: 94 FIKWGKKMKRNTTR--DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELL 151
+ W + + + R + L E+ L +SI G VV ++ L + + G G ++ L
Sbjct: 15 ILPWERPDRHDDARAAEARLEEAVGLAASI-GLVVVCQAVLLLRARRPATLLGGGQVDSL 73
Query: 152 KRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQI 211
K V+ D +T V + + + QQ+ L+ V DR +++ IF A TRE LQ+
Sbjct: 74 KETVKAD-NITVVIIDSRLTPV-QQRNLERALGCKVIDRTALILDIFGERAATREGTLQV 131
Query: 212 AIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKL 260
+A L Y R R + T++ +G +++ R ++ +R +LK+ L ++
Sbjct: 132 ELAHLEY--QRSRLVRTWTHLERQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQV 189
Query: 261 KGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGM 320
+ R + R ++R FP VA+VGYTN GK+TL ALT S+ ++QLFATLD T
Sbjct: 190 RRTRGLHRQARRRVPFPIVALVGYTNAGKSTLFNALTGA-SVYAQDQLFATLDPTMRGIQ 248
Query: 321 LPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDE 380
LP+ R++ DT+GFIS++PT L+ F+ TLE+ ADII+HV DVS+PD Q+ V E
Sbjct: 249 LPSGRRVILSDTVGFISDLPTELIAAFRATLEEVAEADIILHVRDVSHPDSASQRNDVIE 308
Query: 381 TLQHLE----LEEKILEHVLVVGNKVDAVPPGERV-TEEYDLLISATRGTGLAQLKEKVQ 435
L+ + +E+ V+ V NK D V + V +++ISA G GL L +
Sbjct: 309 VLEGMARNGTIEQDWQSRVIEVLNKADLVGGRDAVGARPGNVVISAITGDGLPDLLAAID 368
Query: 436 DMILKATGRKNITMRVR-SGGSEYQWLMKHTAVSNIRED 473
+ + +A + + RV + G+ WL +H V+ RED
Sbjct: 369 ERMTRAM--EVVAYRVPLAEGAAMAWLYEHGEVTE-RED 404
>gi|311113256|ref|YP_003984478.1| GTP-binding protein [Rothia dentocariosa ATCC 17931]
gi|310944750|gb|ADP41044.1| GTP-binding protein [Rothia dentocariosa ATCC 17931]
Length = 549
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 181/346 (52%), Gaps = 25/346 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+D + L D +F G G LK V T + S L Q
Sbjct: 130 AALAETAGSEVLDGLVQRRLKPDPGTFLGSGKALELKDIVEASGADTVIVDSE--LAPSQ 187
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI--------- 226
++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L Y+ R R
Sbjct: 188 RRALEDIVKVKVIDRTALILDIFAQHAKSREGKAQVELAQLEYMLPRLRGWGASLSRQAG 247
Query: 227 -EDATNMNI-TKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
A+ I ++G ++K R L R KLK+ + + RE R ++R + P+VA
Sbjct: 248 GRAASGEGIGSRGPGETKIEMDRRRLRARMAKLKREIAAMAPARETKRLSRKRNRVPSVA 307
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+ GYTN GK++L+ LTD LV N LFATLD T + P+ + DT+GF+ ++P
Sbjct: 308 IAGYTNAGKSSLLNRLTDAGVLV-ENALFATLDPTVRKAQTPDGIGYTLSDTVGFVRSLP 366
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
T L+E F+ TLE+ AD+I+HVVD S+PD Q + V E + L+ +I E ++ N
Sbjct: 367 TQLVEAFRSTLEEVADADVILHVVDASHPDPEGQIRAVREVIADLDA-RRIPE--IIALN 423
Query: 401 KVDAVPP----GERVTEEYDLLISATRGTGLAQLKEKVQDMILKAT 442
K DA P R E +++SA G G+ +LK+K+ D I + +
Sbjct: 424 KADAADPFILERMRQRESNHVIVSARTGEGIDELKQKIADTIPRPS 469
>gi|422325394|ref|ZP_16406430.1| hypothetical protein HMPREF0737_01540 [Rothia mucilaginosa M508]
gi|353343398|gb|EHB87716.1| hypothetical protein HMPREF0737_01540 [Rothia mucilaginosa M508]
Length = 570
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 183/346 (52%), Gaps = 25/346 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+D + L D +F G G LK V T + S L Q
Sbjct: 142 AALAETAGSEVLDGLVQRRLKPDPGTFLGSGKALELKDIVEATGADTVIVDSE--LAPSQ 199
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYR----------- 224
++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L Y+ R R
Sbjct: 200 RRALEDIVKVKVIDRTALILDIFAQHAKSREGKAQVELAQLEYMLPRLRGWGASLSRQAG 259
Query: 225 TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
A ++G ++K R L R KLK+ + + RE R ++R + P+VA
Sbjct: 260 GRAAAGEGIGSRGPGETKIEMDRRRLRARMAKLKREIAAMAPARETKRLNRRRNRVPSVA 319
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+ GYTN GK++L+ LTD LV N LFATLD T + P+ + DT+GF+ ++P
Sbjct: 320 IAGYTNAGKSSLLNRLTDAGVLV-ENALFATLDPTVRKAQTPDGIGYTLSDTVGFVRSLP 378
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
T L+E F+ TLE+ AD+I+HVVD S+PD Q + V E + E++ + + ++V+ N
Sbjct: 379 TQLVEAFRSTLEEVADADVILHVVDASHPDPEGQIRAVREVIA--EVDARHIPEIIVL-N 435
Query: 401 KVDAVPPG--ERV--TEEYDLLISATRGTGLAQLKEKVQDMILKAT 442
K DA P ER+ E +++SA G G+ +LK+K+ D I + +
Sbjct: 436 KADAADPFVLERLRQREPEHVIVSARTGEGIEELKQKIADTIPRPS 481
>gi|347761715|ref|YP_004869276.1| GTP-binding GTPase [Gluconacetobacter xylinus NBRC 3288]
gi|347580685|dbj|BAK84906.1| GTP-binding GTPase [Gluconacetobacter xylinus NBRC 3288]
Length = 436
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/400 (32%), Positives = 208/400 (52%), Gaps = 30/400 (7%)
Query: 94 FIKWGKKMKRNTTR--DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELL 151
+ W + + + R + L E+ L +SI G VV ++ L + + G G +E L
Sbjct: 15 ILPWERPDRHDDARAAEARLEEAVGLAASI-GLVVVCQAVLLLRARRPATLLGGGQVESL 73
Query: 152 KRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQI 211
K V+ D +T V + + + QQ+ L+ V DR +++ IF A TRE LQ+
Sbjct: 74 KETVKAD-NITVVIIDSRLTPV-QQRNLERALGCKVIDRTALILDIFGERAATREGTLQV 131
Query: 212 AIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKL 260
+A L Y R R + T++ +G +++ R ++ +R +LK+ L ++
Sbjct: 132 ELAHLEY--QRSRLVRTWTHLERQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQV 189
Query: 261 KGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGM 320
+ R + R ++R FP VA+VGYTN GK+TL ALT S+ ++QLFATLD T
Sbjct: 190 RRTRGLHRQARRRVPFPIVALVGYTNAGKSTLFNALTGA-SVYAQDQLFATLDPTMRGIQ 248
Query: 321 LPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDE 380
LP+ R++ DT+GFIS++PT L+ F+ TLE+ ADII+HV DVS+PD Q+ V E
Sbjct: 249 LPSGRRVILSDTVGFISDLPTELIAAFRATLEEVAEADIILHVRDVSHPDSASQRNDVIE 308
Query: 381 TLQHLE----LEEKILEHVLVVGNKVDAVPPGERV-TEEYDLLISATRGTGLAQLKEKVQ 435
L+ + +EE ++ V NK D V E V +++ISA G GL L +
Sbjct: 309 VLEGMARNGTIEEDWQGRIIEVLNKADLVGGREAVGARPGNVVISAITGDGLPDLLAAID 368
Query: 436 DMILKA--TGRKNITMRVRSGGSEYQWLMKHTAVSNIRED 473
+ + +A ++ + + G+ WL +H V+ RED
Sbjct: 369 ERMTRAMEVALYHVPL---TEGAVMAWLYEHGEVTG-RED 404
>gi|283458469|ref|YP_003363095.1| GTPase [Rothia mucilaginosa DY-18]
gi|283134510|dbj|BAI65275.1| GTPase [Rothia mucilaginosa DY-18]
Length = 571
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 181/346 (52%), Gaps = 25/346 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+D + L D +F G G LK V T + S L Q
Sbjct: 143 AALAETAGSEVLDGLVQRRLKPDPGTFLGSGKALELKDIVEATGADTVIVDSE--LAPSQ 200
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYR----------- 224
++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L Y+ R R
Sbjct: 201 RRALEDIVKVKVIDRTALILDIFAQHAKSREGKAQVELAQLEYMLPRLRGWGASLSRQAG 260
Query: 225 TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
A ++G ++K R L R KLK+ + + RE R ++R + P+VA
Sbjct: 261 GRAAAGEGIGSRGPGETKIEMDRRRLRARMAKLKREIAAMAPARETKRLNRRRNRVPSVA 320
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+ GYTN GK++L+ LTD LV N LFATLD T + P+ + DT+GF+ ++P
Sbjct: 321 IAGYTNAGKSSLLNRLTDAGVLV-ENALFATLDPTVRKAQTPDGIGYTLSDTVGFVRSLP 379
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
T L+E F+ TLE+ AD+I+HVVD S+PD Q + V E + E++ + + ++V+ N
Sbjct: 380 TQLVEAFRSTLEEVADADVILHVVDASHPDPEGQIRAVREVIA--EVDARHIPEIIVL-N 436
Query: 401 KVDAVPP----GERVTEEYDLLISATRGTGLAQLKEKVQDMILKAT 442
K DA P R E +++SA G G+ +LK+K+ D I + +
Sbjct: 437 KADAADPFVLERMRQREPEHVIVSARTGEGIEELKQKIADTIPRPS 482
>gi|296445792|ref|ZP_06887744.1| GTP-binding proten HflX [Methylosinus trichosporium OB3b]
gi|296256620|gb|EFH03695.1| GTP-binding proten HflX [Methylosinus trichosporium OB3b]
Length = 462
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 192/366 (52%), Gaps = 33/366 (9%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQ 184
+ + ++SL +F GKG +E + V+ A V++D L QQ+ L+ +
Sbjct: 60 IAEPILVSLSQVRPSTFLGKGKVEEIADAVKN---AEATLVTMDCQLSPVQQRNLEKAWG 116
Query: 185 VPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------ 238
V DR ++++IF A+T+E LQ+ +A L Y + R + T++ +G
Sbjct: 117 AKVIDRTGLILEIFGRRARTKEGALQVELAHLEY--QKSRLVRSWTHLERQRGGFGFLGG 174
Query: 239 -----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLI 293
+++ R ++ ER ++++ L ++K R + R ++ +P VA+VGYTN GK+TL
Sbjct: 175 PGETQIETDRRLIEERMARIERDLEQVKRTRGLHRKNRREVPYPVVALVGYTNAGKSTLF 234
Query: 294 KALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLED 353
LT L + LFATLD T + LP+ ++L DT+GFIS++PT L+ F+ TLE+
Sbjct: 235 NRLTKAGVLA-EDMLFATLDPTLRQIRLPHGAKVLLSDTVGFISDLPTMLITAFRATLEE 293
Query: 354 AMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT- 412
MLAD+++HV DVS+ D+ Q + V+ L L L + +L V NK+DA+ P ER+
Sbjct: 294 VMLADVVLHVRDVSHEDWEAQAEDVEAILAELGLSGEAGARILEVWNKIDALDP-ERLAA 352
Query: 413 ----------EEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG-GSEYQWL 461
E L+SA G GL L E+++ + A GR + + + G + WL
Sbjct: 353 LAVAAESAQGRERPSLVSALTGEGLEALLERIEQRL--AEGRVELEIALDPADGEGFAWL 410
Query: 462 MKHTAV 467
H V
Sbjct: 411 HSHAEV 416
>gi|218133163|ref|ZP_03461967.1| hypothetical protein BACPEC_01025 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992036|gb|EEC58040.1| GTP-binding protein HflX [[Bacteroides] pectinophilus ATCC 43243]
Length = 437
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 192/356 (53%), Gaps = 30/356 (8%)
Query: 102 KRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLE---LLKRQVRGD 158
+R+ TR LAE + LV + G +V D I + + ++ GKG +E L Q D
Sbjct: 28 ERDDTRQ-SLAELRELVKT-AGAQVCDVVIQNREAVHPGTYIGKGKIEELACLAAQYDAD 85
Query: 159 ARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY 218
V D L Q K L++ V DR ++++ IF A A T E ++Q+ +A+L Y
Sbjct: 86 G-----IVCDDELSPAQLKNLEEELNCKVLDRTLVILDIFAARASTSEGKIQVEMAQLKY 140
Query: 219 LWTRYRTIEDATNMN----------ITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMR 268
+R + +M+ + ++ R ++ +R +LK L+++ RE+ R
Sbjct: 141 RMSRLAGLGLGLSMSRLGGGVGTRGPGEKKIEMDRRLIRDRIAQLKSELDEVVRHREVTR 200
Query: 269 NKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRIL 328
++++ P A+VGYTN GK+TL+ LTD D L ++LFATLD TT E +L ++ R+L
Sbjct: 201 QQRKKTSMPVAAIVGYTNAGKSTLLNRLTDADVL-SEDKLFATLDPTTRELVLTDKSRVL 259
Query: 329 YVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELE 388
DT+GFI +P L++ F+ TLE+A ADII+HVVD SN D +Q + V +TLQ LE+
Sbjct: 260 LTDTVGFIRKLPHHLIDAFRSTLEEARYADIIVHVVDASNDDMERQMEIVYDTLQELEVG 319
Query: 389 EKILEHVLVVGNKVDAVPPGERVTEEYD------LLISATRGTGLAQLKEKVQDMI 438
+K V+ + NK D + + + D + ISA G GL + +E + D++
Sbjct: 320 DK---PVITLFNKCDMLDMTDSSAKPRDFKADKTVYISAKTGQGLDEFEEALGDIL 372
>gi|153855189|ref|ZP_01996373.1| hypothetical protein DORLON_02387 [Dorea longicatena DSM 13814]
gi|149752358|gb|EDM62289.1| GTP-binding protein HflX [Dorea longicatena DSM 13814]
Length = 422
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 180/341 (52%), Gaps = 22/341 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E K LVS+ G V I + ++ GKG +E LK + + R T + V D
Sbjct: 28 LEELKDLVST-AGAETVGMVIQNREQQHPGTYVGKGKIEELKSMI-WELRATGI-VCDDE 84
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY------- 223
L Q K LQD V V DR +I++ IF A A T E ++Q+ +A+L Y TR
Sbjct: 85 LSPAQMKNLQDELDVKVMDRTLIILDIFAARASTSEGKIQVELAQLKYQQTRLAGFGKAM 144
Query: 224 -RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
R + L+ R ++ R +L + L +K RE+ R ++ R P A+V
Sbjct: 145 SRLGGGIGTRGPGEKKLEMDRRLIKSRIAQLNRELKDVKKHREVTREQRSRSHIPVAAIV 204
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ LT + ++LFATLD TT + LP+ IL DT+GFI +P
Sbjct: 205 GYTNAGKSTLLNTLTGA-GIFAEDKLFATLDPTTRDLKLPSGQEILMTDTVGFIRKLPHH 263
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+E F+ TLE+A ADII+HVVD SNP +Q V ETLQ+L +++K V+ V NK+
Sbjct: 264 LIEAFRSTLEEARYADIILHVVDASNPQMDEQMHTVYETLQNLGVKDK---PVITVFNKI 320
Query: 403 DA-----VPPGERVTEEYDLLISATRGTGLAQLKEKVQDMI 438
D VP + +Y + ISA G G+ + + V+ ++
Sbjct: 321 DRMEDIWVP--RDLHADYYVKISARTGEGITEFLQSVEAVL 359
>gi|283796120|ref|ZP_06345273.1| GTP-binding protein HflX [Clostridium sp. M62/1]
gi|291076336|gb|EFE13700.1| GTP-binding protein HflX [Clostridium sp. M62/1]
Length = 417
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 182/331 (54%), Gaps = 25/331 (7%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDA---RVTAVFVSVDVLKLHQQKML 179
G +D I + ++ GKG +E +VRG A T + V D L Q + L
Sbjct: 42 GATAIDRIIQNRERVHPGTYLGKGKIE----EVRGRAAELHATGI-VCDDELSPAQLRNL 96
Query: 180 QDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN-------- 231
+D Q+ V DR M+++ IF +HA TRE ++Q+ +A+L Y R + ++ +
Sbjct: 97 EDALQIKVMDRTMVILDIFASHAVTREGKIQVELAQLRYRAARLVGLRNSLSRLGGGIGT 156
Query: 232 MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTT 291
+ L+ R ++ ER +LK L +K RE+ R ++ R + A+VGYTN GK+T
Sbjct: 157 RGPGEKKLEVDRRLIHERIGQLKSELENVKRHREVARQQRDRNCTVSAAIVGYTNAGKST 216
Query: 292 LIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTL 351
L+ LTD ++ ++ LFATLD TT LP+ +IL DT+GFI +P L+E FK TL
Sbjct: 217 LLNYLTDA-GILAQDMLFATLDPTTRTLELPSGQKILLTDTVGFIRKLPHHLIEAFKSTL 275
Query: 352 EDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERV 411
E+A +DII+HVVDVSNP Q V ETL+ LE+ +K V+ V NK+D + G+ +
Sbjct: 276 EEARYSDIILHVVDVSNPQMETQIHIVYETLRQLEITDKT---VITVFNKMDRL-TGDVI 331
Query: 412 T----EEYDLLISATRGTGLAQLKEKVQDMI 438
++ + ISA G G+ L E ++ ++
Sbjct: 332 LRDFRSDFQVKISAKTGEGIPALLETLEGIL 362
>gi|46447400|ref|YP_008765.1| hypothetical protein pc1766 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401041|emb|CAF24490.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 444
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 197/394 (50%), Gaps = 30/394 (7%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V SL FD ++ KG LE L Q+ + V + D + QQ+ LQ
Sbjct: 54 GIEVAKKEPCSLRKFDASTYVSKGKLEELI-QIANELAVDLIIFD-DEITPAQQRNLQAA 111
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWTRYRTIEDATNMNIT 235
F PV DR +++ +F A T+EARLQI +A++ Y LWT + +
Sbjct: 112 FNKPVIDRTELILGVFAQRAHTKEARLQIELAKIKYEAPRLKRLWTHLSRQQGTSGSGGG 171
Query: 236 KGFLDSK--------RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
+L + + +L + L+K ++ +K RE R + R P A++GYTN
Sbjct: 172 GAYLKGEGEKQIEIDKRILKRKMDVLQKEIDDVKAVRETQRLSRVRSAIPVFAIIGYTNA 231
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GK+TL+ ALTD V ++LFATLD TT + LPN IL VDT+GFI +P L+ F
Sbjct: 232 GKSTLLNALTDAGVFV-EDKLFATLDTTTRKFTLPNNQDILIVDTVGFIRKLPHLLVAAF 290
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP 407
K TLE+A+ ADI++H++DVS+P +Q E LQ L +K ++ V NK+D
Sbjct: 291 KSTLEEAIEADILLHLIDVSHPMAEEQAATTYEVLQELGAGKK---PIITVLNKIDQCEH 347
Query: 408 GE-----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLM 462
R++ ++ ISA + G E++Q+ +++ R+ R S+Y +
Sbjct: 348 PHMIHRIRMSYPKNVQISALKKIGF----EELQEAMIQELSRQRQVAEFRIPQSDYGSVS 403
Query: 463 KHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKH 496
+ + +I D +LL V + +I++K+ H
Sbjct: 404 EIIRLGHILSQDYEDNDVLLKVDLPALIVDKYAH 437
>gi|349686568|ref|ZP_08897710.1| GTP-binding GTPase [Gluconacetobacter oboediens 174Bp2]
Length = 436
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 208/399 (52%), Gaps = 28/399 (7%)
Query: 94 FIKWGKKMKRNTTR--DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELL 151
+ W + + + R + L E+ L +SI G VV ++ L + + G G ++ L
Sbjct: 15 ILPWERPDRHDDARAAEARLEEAVGLAASI-GLVVVCQAVLLLRARRPATLLGGGQVDSL 73
Query: 152 KRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQI 211
K V+ D +T V + + + QQ+ L+ V DR +++ IF A TRE LQ+
Sbjct: 74 KETVKAD-NITVVIIDSRLTPV-QQRNLERALGCKVIDRTALILDIFGERAATREGTLQV 131
Query: 212 AIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKL 260
+A L Y R R + T++ +G +++ R ++ +R +LK+ L ++
Sbjct: 132 ELAHLEY--QRSRLVRTWTHLERQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQV 189
Query: 261 KGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGM 320
+ R + R ++R FP VA+VGYTN GK+TL ALT S+ ++QLFATLD T
Sbjct: 190 RRTRGLHRQARRRVPFPIVALVGYTNAGKSTLFNALTGA-SVYAQDQLFATLDPTMRGIQ 248
Query: 321 LPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDE 380
LP+ R++ DT+GFIS++PT L+ F+ TLE+ ADII+HV DVS+PD Q+ V E
Sbjct: 249 LPSGRRVILSDTVGFISDLPTELIAAFRATLEEVAEADIILHVRDVSHPDSASQRTDVIE 308
Query: 381 TLQHLE----LEEKILEHVLVVGNKVDAVPPGERV-TEEYDLLISATRGTGLAQLKEKVQ 435
L+ + +E+ V+ V NK D V + V +++ISA G GL L +
Sbjct: 309 VLEGMARNGTIEQDWQSRVIEVLNKADLVGGRDAVGARPGNVVISAITGDGLPDLLAAID 368
Query: 436 DMILKATGRKNITMRVR-SGGSEYQWLMKHTAVSNIRED 473
+ + +A + RV + G+ WL +H V+ RED
Sbjct: 369 ERMTRAM--EVAAYRVPLAEGAAMAWLYEHGEVTQ-RED 404
>gi|160893538|ref|ZP_02074323.1| hypothetical protein CLOL250_01090 [Clostridium sp. L2-50]
gi|156864933|gb|EDO58364.1| GTP-binding protein HflX [Clostridium sp. L2-50]
Length = 437
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 181/331 (54%), Gaps = 19/331 (5%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR-GDARVTAVFVSVDVLKLHQQKMLQD 181
G V I SL + G G +E L+ V DA T V V D L Q LQD
Sbjct: 53 GAATVGRLIQSLDRATSDLYLGSGKVEELRSMVAMYDA--TGV-VCDDELSPAQLMNLQD 109
Query: 182 LFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--------MN 233
+ V DR M+++ IF AHA + E +LQ+ +A+L + TR + D+ +
Sbjct: 110 ALNIKVMDRTMVILDIFAAHAGSYEGKLQVELAQLRFRATRLVGMRDSLSRLGGGIGTRG 169
Query: 234 ITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLI 293
+ L+ R V+ +R KLK L +++G+R R ++ R P V++VGYTN GK+TL+
Sbjct: 170 PGEKKLEIDRRVIRDRISKLKADLRQVEGRRTEQRKQRNRTGIPVVSIVGYTNAGKSTLL 229
Query: 294 KALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLED 353
LT ++ ++LFATLD T +LP ++L+ DT+GFI +P L+E FK TLE+
Sbjct: 230 NKLTGA-GVLEEDKLFATLDPATRNAVLPAGQQVLFTDTVGFIRKLPHHLVEAFKSTLEE 288
Query: 354 AMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTE 413
A +D+I+HVVD S+P++ + + V TL+ L ++E+ ++ V NK+D +P G ++
Sbjct: 289 AKYSDVILHVVDASDPNWDRNMETVYATLRQLNVDEEKDHPIITVFNKIDKLPEGGDISM 348
Query: 414 EYDL------LISATRGTGLAQLKEKVQDMI 438
DL +SA G G+ L +V++++
Sbjct: 349 IKDLRADRMVYLSAKTGAGIDDLLVQVEEVL 379
>gi|83311472|ref|YP_421736.1| GTPase [Magnetospirillum magneticum AMB-1]
gi|82946313|dbj|BAE51177.1| GTPase [Magnetospirillum magneticum AMB-1]
Length = 435
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/411 (31%), Positives = 213/411 (51%), Gaps = 32/411 (7%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ VV P K G+ N + LAE+ L +I +V + +++ + GKG
Sbjct: 13 RAMVVHPAFKGGEG---NRLPEARLAEAVGLAGAIN-LDIVAAEAVNVSKVRPATLIGKG 68
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
+E L V + R A+ V L QQ+ L+ + V DR ++++IF A A+TRE
Sbjct: 69 AVERLAELV--EERDIALAVVDGHLTPVQQRNLEKAWGCKVIDRTGLILEIFGARARTRE 126
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKK 255
LQ+ +A L Y R R + T++ +G +++ R ++ ER KL++
Sbjct: 127 GTLQVELAALSY--QRSRLVRSWTHLERQRGGFGFLGGPGETQIEADRRMIGERIVKLER 184
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L +K R++ R ++R +P VA+VGYTN GK+TL LT + L ++ LFATLD T
Sbjct: 185 ELEDVKRTRDLHRKARRRVPYPIVALVGYTNAGKSTLFNQLTRAEVLA-KDMLFATLDPT 243
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
+ +LP+ +I+ DT+GFIS++P L+ F+ TLE+ + AD+++HV DVS+PD Q
Sbjct: 244 MRDLVLPSGRKIILSDTVGFISDLPHELVAAFRATLEEVLEADVVVHVRDVSHPDTEAQA 303
Query: 376 QHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTE--------EYDLLISATRGTGL 427
VD L+ L L E + ++ NK+D + ER E E + +SA G G+
Sbjct: 304 ADVDTVLKELGLAEVVDRGLVEALNKIDLLDD-ERRQEVLNQARRREGVMALSAVTGQGV 362
Query: 428 AQLKEKVQDMILKATGRKNITMRVRSG-GSEYQWLMKHTAVSNIREDDTSA 477
+L ++ + A R+ I + + G G+ WL +H V R+D+ A
Sbjct: 363 DELLAELDRRLGHA--RETIDVALSLGDGASIAWLYRHGEVVARRDDEAQA 411
>gi|358062786|ref|ZP_09149425.1| GTP-binding protein HflX [Clostridium hathewayi WAL-18680]
gi|356699001|gb|EHI60522.1| GTP-binding protein HflX [Clostridium hathewayi WAL-18680]
Length = 417
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 184/344 (53%), Gaps = 21/344 (6%)
Query: 110 MLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD 169
L E + LV + G VD I + ++ GKG +E +K ++ + T V V D
Sbjct: 30 CLNELEELVKT-AGAATVDKIIQNRERIHPGTYLGKGKIEEVKERI-WELDATGV-VCDD 86
Query: 170 VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY------ 223
L Q + L+ V DR M+++ IF + A T E ++Q+ +A+L Y R
Sbjct: 87 ELSPAQLRNLEQALDTKVMDRTMVILDIFASRANTSEGKIQVELAQLKYRAARLVGLRSS 146
Query: 224 --RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
R + L+ R ++ ER +LK L ++ R++MR ++ + A+
Sbjct: 147 LSRLGGGIGTRGPGEKKLEMDRRLIHERIGQLKAELRDVERHRDVMRQQRSKNHTTVAAI 206
Query: 282 VGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPT 341
VGYTN GK+TL+ LTD ++ ++LFATLD TT LP+ +IL DT+GFI +P
Sbjct: 207 VGYTNAGKSTLLNLLTDA-GILAEDKLFATLDPTTRNLELPSGQQILLTDTVGFIRKLPH 265
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
L+E FK TLE+A +DII+HVVD SNP Q V ETL+ LE+ KI+ + + NK
Sbjct: 266 HLIEAFKSTLEEARYSDIILHVVDCSNPQMDMQMYTVYETLKQLEVTGKIM---VTIYNK 322
Query: 402 VDAVPPGER-----VTEEYDLLISATRGTGLAQLKEKVQDMILK 440
+D + ER ++ +Y L ISA G G+ +LK+ ++ MIL+
Sbjct: 323 IDKIEEEERRLPKDLSADYQLAISAKTGEGIGELKDTLE-MILR 365
>gi|114704562|ref|ZP_01437470.1| GTP binding protein-like [Fulvimarina pelagi HTCC2506]
gi|114539347|gb|EAU42467.1| GTP binding protein-like [Fulvimarina pelagi HTCC2506]
Length = 459
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 207/398 (52%), Gaps = 31/398 (7%)
Query: 98 GKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRG 157
G ++ + D L E+ L ++IQ +VDS II+ + + G+G +E LK V
Sbjct: 38 GSNLEVRRSPDAKLEEALGLAAAIQ-LEIVDSGIITQRAPRPATLIGQGKVEELKGVVVA 96
Query: 158 DARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELP 217
+ + V + + + QQ+ L+ V DR ++++IF A+T+E RLQ+ +A L
Sbjct: 97 E-EIGLVIIDHPLTPV-QQRNLERELNAKVLDRTALILEIFGERARTKEGRLQVELAHLN 154
Query: 218 YLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREM 266
Y R R + T++ +G +++ R L + + L+ L K++ R++
Sbjct: 155 Y--QRGRLVRSWTHLERQRGGAGFLGGPGETQIEADRRQLQSKIKALEVELEKVRSTRQL 212
Query: 267 MRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLR 326
R K++++ P VA+VGYTN GK+TL +T D +N LFATLD T L +
Sbjct: 213 HRAKRRKRPHPIVALVGYTNAGKSTLFNRMTGADVFA-QNLLFATLDPTMRRTTLAHGTE 271
Query: 327 ILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLE 386
IL+ DT+GFIS +PT L+ F+ TLE+ + ADII+H+ DVS+PD L Q + V + L+ LE
Sbjct: 272 ILFSDTVGFISELPTHLVAAFRATLEEVIEADIILHIRDVSDPDSLAQAEDVRQILRDLE 331
Query: 387 LEEKILEHVLVVGNKVDAVPPGER----------VTEEYDLLISATRGTGLAQLKEKVQD 436
++ +HV+ V NK+D V ER +E ++SA G G+ L ++
Sbjct: 332 IDADDTDHVVEVWNKIDRVDGSERERIETLAANEAEKERPHVVSAWTGEGIEALLADIER 391
Query: 437 MILKATGRKNITMRVRSGGSEY-QWLMKHTAVSNIRED 473
I +T+ G Y W+ ++ +V + RED
Sbjct: 392 RIAGKIAELAVTL--DPDGLRYLSWIYENASVLD-RED 426
>gi|354594033|ref|ZP_09012076.1| GTP-binding protein hflX [Commensalibacter intestini A911]
gi|353673144|gb|EHD14840.1| GTP-binding protein hflX [Commensalibacter intestini A911]
Length = 430
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 213/408 (52%), Gaps = 28/408 (6%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFM--LAESKALVSSIQGWRVVDSTIISLLSFDKKSFF 143
HQ + W +++ R+ L E+ L SSI+ + + II+L S+ +
Sbjct: 8 HQTTRAAVIVPWDISNRQSNNRNSQSRLEEAIGLASSIR-LEISHTEIINLRSYRSATLI 66
Query: 144 GKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAK 203
G+G++E LK ++ + A+F + L QQ+ L+ + V DR +++ IF A+
Sbjct: 67 GQGHIESLKDSIQSNEIDIAIFDTR--LSPIQQRNLEKALECKVIDRTALILDIFGERAQ 124
Query: 204 TREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQK 252
T+E LQ+ +A L Y R R + T++ +G +++ R ++ ER +
Sbjct: 125 TKEGTLQVELAHLQY--QRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLIDERIIR 182
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
LKK L +++ R + R +Q+ FP VA++GYTN GK+TL LT D + ++QLFATL
Sbjct: 183 LKKDLEQVRRTRGLHRKARQKVPFPIVALIGYTNAGKSTLFNNLTGAD-VHAQDQLFATL 241
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D T + LP+ I+ DT+GFIS++PT L+ F+ TLE+ ADII+HV D+S+P+
Sbjct: 242 DPTMRKLQLPSGKTIILSDTVGFISDLPTELIAAFRATLEETAEADIILHVRDISHPETT 301
Query: 373 QQKQHVDETLQHLELEEKILE-----HVLVVGNKVDAVPPGERVTEEYDLL-ISATRGTG 426
+Q+Q V L + ++++ILE + + V NK+D + + + D + ISA
Sbjct: 302 EQRQDVFSVLDTM-VKDQILEADWRKNTIEVLNKIDLIENIALIDKPKDFIGISALTSEN 360
Query: 427 LAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDD 474
L L + + D + K + V S G+ WL H + R DD
Sbjct: 361 LPSLIQMIDDRLAKMMEEITFVIPV-SDGAALSWLYNHGEILQ-RNDD 406
>gi|295115512|emb|CBL36359.1| GTP-binding protein HflX [butyrate-producing bacterium SM4/1]
Length = 417
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 181/328 (55%), Gaps = 19/328 (5%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G +D I + ++ GKG +E + R+ + T + V D L Q + L+D
Sbjct: 42 GATAIDRIIQNRERVHPGTYLGKGKIEEV-RERAAELHATGI-VCDDELSPAQLRNLEDA 99
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--------MNI 234
Q+ V DR M+++ IF +HA TRE ++Q+ +A+L Y R + ++ +
Sbjct: 100 LQIKVMDRTMVILDIFASHAVTREGKIQVELAQLRYRAARLVGLRNSLSRLGGGIGTRGP 159
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ L+ R ++ ER +LK L +K RE+ R ++ R + A+VGYTN GK+TL+
Sbjct: 160 GEKKLEVDRRLIHERIGQLKSELENVKRHREVARQQRDRNCTVSAAIVGYTNAGKSTLLN 219
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LTD ++ ++ LFATLD TT LP+ +IL DT+GFI +P L+E FK TLE+A
Sbjct: 220 YLTDA-GILAQDMLFATLDPTTRTLELPSGQKILLTDTVGFIRKLPHHLIEAFKSTLEEA 278
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT-- 412
+DII+HVVDVSNP Q V ETL+ LE+ +K V+ V NK+D + G+ +
Sbjct: 279 RYSDIILHVVDVSNPQMETQIHIVYETLRQLEITDKT---VITVFNKMDRL-TGDVILRD 334
Query: 413 --EEYDLLISATRGTGLAQLKEKVQDMI 438
++ + ISA G G+ L E ++ ++
Sbjct: 335 FRSDFQVKISAKTGEGIPALLETLEGIL 362
>gi|295395416|ref|ZP_06805615.1| GTP-binding protein HflX [Brevibacterium mcbrellneri ATCC 49030]
gi|294971738|gb|EFG47614.1| GTP-binding protein HflX [Brevibacterium mcbrellneri ATCC 49030]
Length = 510
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 187/352 (53%), Gaps = 37/352 (10%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G RV+D + + D ++ G+G + L V A V A V D L
Sbjct: 108 AALAETAGSRVLDGVLQRRDTPDPSTYLGRGKAQELAEIV---ASVGADTVITDTELAPS 164
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 165 QRRALEDVVKVKVIDRVALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQA 224
Query: 235 -----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
TK LD +R + R KL++ + + RE R+ + R K P
Sbjct: 225 GGRVAGGAGIGSRGPGETKIELDRRR--IRTRMAKLRREIKAMAPARETKRSNRTRNKVP 282
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+VA+VGYTN GK++L+ LTD +V +N+LFATLD T + + Y DT+GF+
Sbjct: 283 SVAIVGYTNAGKSSLLNRLTDAGVMV-KNELFATLDPTVRQAHTADGRVFTYTDTVGFVR 341
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETL---QHLELEEKILEH 394
N+P L+E F+ TLE+A AD+++H+VD S+ D L Q + V E L Q +++ E
Sbjct: 342 NLPHQLVEAFRSTLEEAADADLLLHIVDASHTDPLAQIKAVHEVLDEAQTIDIPE----- 396
Query: 395 VLVVGNKVDAVPPG--ERVTEEYD--LLISATRGTGLAQLKEKVQDMILKAT 442
L+V NK D RV Y +++SA G G+ +L+E++ D++ + +
Sbjct: 397 -LIVFNKADIADSDTLARVLNTYPNAVVVSAHTGQGIDELRERIDDLLPRPS 447
>gi|154484696|ref|ZP_02027144.1| hypothetical protein EUBVEN_02413 [Eubacterium ventriosum ATCC
27560]
gi|149734544|gb|EDM50461.1| GTP-binding protein HflX [Eubacterium ventriosum ATCC 27560]
Length = 410
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 177/323 (54%), Gaps = 16/323 (4%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G VV I +L ++ G G +E LK + + TAV V D L Q K L+D
Sbjct: 39 GATVVGRMIQNLEHASSATYIGSGKVEELKDLI-WETEATAV-VCDDELTPAQYKNLEDE 96
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY-------RTIEDATNMNIT 235
V V DR +I++ IF AKT E ++Q+ +A+L Y TR R
Sbjct: 97 LDVKVMDRTLIILDIFAGRAKTAEGKIQVELAQLRYRSTRLIGMRNLSRQGGGIGTRGPG 156
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ R ++ +R +LK + L+ R++ R ++Q P +A+VGYTN GK+TL+
Sbjct: 157 EKKLEVDRRLIRDRISQLKSQVEDLESHRQVTRARRQENPVPVIAIVGYTNAGKSTLLNT 216
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LTD ++ ++LFATLD TT LP+ +L DT+GFI +P L++ F+ TLE+A
Sbjct: 217 LTDA-RVLEEDKLFATLDPTTRNYKLPDGQEVLLTDTVGFIRKLPHHLIDAFRSTLEEAK 275
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV---PPGERVT 412
+DIIIHVVD SNP + Q V +TL++LE+++KI ++ V NK+D + P +
Sbjct: 276 YSDIIIHVVDSSNPVMDKNVQAVYDTLKNLEVKDKI---IITVFNKIDKLEEKPIMKDFN 332
Query: 413 EEYDLLISATRGTGLAQLKEKVQ 435
+Y + + +G GL +L E ++
Sbjct: 333 ADYTVETAIKKGIGLDELNEIIE 355
>gi|300087801|ref|YP_003758323.1| GTP-binding proten HflX [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527534|gb|ADJ26002.1| GTP-binding proten HflX [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 367
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 188/354 (53%), Gaps = 32/354 (9%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVD 169
L+E LV++I G RV I L S ++++ G+G L EL+ Q + + + D
Sbjct: 22 LSELARLVNTI-GIRVTGHLIQKLSSPKRQTYVGQGKLDELIGTQ---ETQPIDQLIFDD 77
Query: 170 VLKLHQQKMLQDLF-QVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY----- 223
L Q K L +F ++ + DR ++++IF HA+T+E RLQI +A YL R
Sbjct: 78 ELTPLQYKTLVAMFPKIEILDRVSVILEIFSRHARTKEGRLQIELARAQYLLPRLTGQWK 137
Query: 224 ---RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
R + L++ R ++ +R +KK L K+ R + R K+Q P VA
Sbjct: 138 HLERLGGGIGTRGPGESQLETDRRLIQKRITTIKKDLEKVSKHRALYRKKRQMSYIPIVA 197
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+VGYTN GK++L+K LT D LV +NQLFATLD TT LPN +IL DT+GFI +P
Sbjct: 198 LVGYTNSGKSSLLKTLTKSDVLV-QNQLFATLDPTTRRLCLPNLTKILVTDTVGFIHKLP 256
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
T++E FK TLE+ A I++HVVD+S+ +Q V+ L L + +K V+ V N
Sbjct: 257 PTIIEAFKSTLEELQDASILLHVVDISSLHATEQSITVENILAELGIADK---PVITVYN 313
Query: 401 KVDAVP----------PGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
K+D + PG + E +++SA + GL +L ++ ++LK
Sbjct: 314 KIDLIDYNQFLSSVDRPGTQDFLKSCPENTVMVSAEKRLGLDRLLHNIESLLLK 367
>gi|298291760|ref|YP_003693699.1| GTP-binding proten HflX [Starkeya novella DSM 506]
gi|296928271|gb|ADH89080.1| GTP-binding proten HflX [Starkeya novella DSM 506]
Length = 463
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 210/400 (52%), Gaps = 37/400 (9%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E+ L +I G +VV S ++ L ++ G G +E + V+ + VFV +
Sbjct: 53 LEEAVGLALAIDGLQVVASMLVGLTQLRPATYLGTGKVEEIAGVVKAE-EAGLVFVDAPL 111
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
+ QQ+ L+ + V DR ++++IF A+T+E LQ+ +A L Y R R + T
Sbjct: 112 TPV-QQRNLEKAWSAKVIDRTALILEIFGQRARTKEGVLQVELAHLNY--QRSRLVRSWT 168
Query: 231 NMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +G +++ R ++ ER K+++ L ++K R + R +++ +P V
Sbjct: 169 HLERQRGGFGFLGGPGETQIEADRRLIGERILKIERELEQVKRTRALHRASRKKVPYPVV 228
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL LT D ++ ++ LFATLD T LP+ RI+ DT+GFIS++
Sbjct: 229 ALVGYTNAGKSTLFNRLTRSD-VMAQDLLFATLDPTLRAVQLPSGERIILSDTVGFISDL 287
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+ F+ TLE+ + AD+I+HV D+S+ D Q V+ L L+++ + V+ V
Sbjct: 288 PTQLVAAFRATLEEVIEADLILHVRDMSHEDAEAQAHDVEAVLSDLDIDPEDDHRVIEVW 347
Query: 400 NKVDAVPPGERVTEE--YDLLISATRGTGLAQ------LKEKVQDMILKATG----RKNI 447
NK+D R+ EE L +A R G A+ L + D +L A G R+ +
Sbjct: 348 NKID------RLDEEGRARLFNTAERREGDARPIPVSALTGEGVDALLVAIGQRLARERV 401
Query: 448 TMRV---RSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDV 484
++RV + G WL +H+ V RED+ HL + V
Sbjct: 402 SLRVDLDAADGRGLSWLYRHSEVLERREDEGGRLHLAVRV 441
>gi|295092241|emb|CBK78348.1| GTP-binding protein HflX [Clostridium cf. saccharolyticum K10]
Length = 417
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 176/310 (56%), Gaps = 19/310 (6%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG +E + R+ + T + V D L Q + L+D Q+ V DR M+++ IF +
Sbjct: 60 TYLGKGKIEEV-RERAAELHATGI-VCDDELSPAQLRNLEDALQIKVMDRTMVILDIFAS 117
Query: 201 HAKTREARLQIAIAELPYLWTRYRTIEDATN--------MNITKGFLDSKRMVLMEREQK 252
HA TRE ++Q+ +A+L Y R + ++ + + L+ R ++ ER +
Sbjct: 118 HAVTREGKIQVELAQLRYRAARLVGLRNSLSRLGGGIGTRGPGEKKLEVDRRLIHERIGQ 177
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
LK L +K RE+ R ++ R + A+VGYTN GK+TL+ LTD ++ ++ LFATL
Sbjct: 178 LKSELENVKRHREVARQQRDRNCTVSAAIVGYTNAGKSTLLNYLTDA-GILAQDMLFATL 236
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT LP+ +IL DT+GFI +P L+E FK TLE+A +DII+HVVDVSNP
Sbjct: 237 DPTTRTLELPSGQKILLTDTVGFIRKLPHHLIEAFKSTLEEARYSDIILHVVDVSNPQME 296
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT----EEYDLLISATRGTGLA 428
Q V ETL+ LE+ +K V+ V NK+D + G+ + ++ + ISA G G+
Sbjct: 297 TQIHIVYETLRQLEITDKT---VITVFNKMDRL-TGDVILRDFRSDFQVKISAKTGEGIP 352
Query: 429 QLKEKVQDMI 438
L E ++ ++
Sbjct: 353 ALLETLEGIL 362
>gi|260438009|ref|ZP_05791825.1| GTP-binding protein HflX [Butyrivibrio crossotus DSM 2876]
gi|292809489|gb|EFF68694.1| GTP-binding protein HflX [Butyrivibrio crossotus DSM 2876]
Length = 411
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 184/334 (55%), Gaps = 22/334 (6%)
Query: 118 VSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQV-RGDARVTAVFVSVDVLKLHQQ 176
++S G V I +L +F+ ++ GKG ++ +K + DA T + D L Q
Sbjct: 34 LASTAGAVTVARVIQNLDNFNPATYIGKGKIDEIKELIIEYDA--TGIICD-DELSPAQM 90
Query: 177 KMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN----- 231
L D ++ V DR ++++ IF A A T E ++Q+ +A+L Y +R + +A +
Sbjct: 91 NNLSDALEIKVMDRTLLILDIFAARANTNEGKIQVELAQLRYRSSRLSGLGNALSRLGGG 150
Query: 232 ---MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCG 288
+ L+ R ++ ER +LK L + RE+ R+++ R P VA+VGYTN G
Sbjct: 151 IGTRGPGETKLEMDRRIIHERIGQLKHELEAVVTHRELTRSQRSRSNIPVVAIVGYTNAG 210
Query: 289 KTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFK 348
K+TL+ LT ++ N+LFATLD TT L + +IL DT+GFIS +P L+E FK
Sbjct: 211 KSTLLNTLTGA-GILAENKLFATLDPTTRGLELESGQQILLTDTVGFISKLPHHLVEAFK 269
Query: 349 VTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG 408
TLE+A+ ADII+HVVD SNP Q V +TL+ L +K ++ NK++ G
Sbjct: 270 STLEEAVYADIILHVVDASNPAMDSQMYVVYDTLEKLGAGDK---PIITAFNKIEIA--G 324
Query: 409 ERVTEEYD----LLISATRGTGLAQLKEKVQDMI 438
+V +++ + ISA G GL +LK+ +++++
Sbjct: 325 NKVLKDFKADKTVNISALHGDGLTELKDTIEEVL 358
>gi|239616689|ref|YP_002940011.1| GTP-binding proten HflX [Kosmotoga olearia TBF 19.5.1]
gi|239505520|gb|ACR79007.1| GTP-binding proten HflX [Kosmotoga olearia TBF 19.5.1]
Length = 379
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/333 (36%), Positives = 192/333 (57%), Gaps = 23/333 (6%)
Query: 127 VDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVP 186
+D I +L D + +FGKG LE +K+ V + +V ++ L Q+K L+ +V
Sbjct: 1 MDKIIQNLDKPDNRRYFGKGKLEQVKKIV--SFKNISVVITRHNLTPSQKKNLESFLEVK 58
Query: 187 VFDRYMIVIQIFKAHAKTREARLQIAIA----ELPYLWTRYRTIEDATNMNITKG----F 238
V DR ++++IFK HA TRE +L++ +A ELP L + ++ + T+G
Sbjct: 59 VLDRTQVILEIFKKHAVTREGKLEVELARLKYELPSLKGKGTSLSNTGAGIGTRGPGEKI 118
Query: 239 LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTD 298
L+ R + ++R L+K L K + RE++R K+QR P V+ VGYTN GK++LI ALT
Sbjct: 119 LERDRRLALKRITVLQKELIKQRKVREVIRKKRQRNSIPVVSFVGYTNVGKSSLISALTG 178
Query: 299 DDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLAD 358
D LV NQLF+TLDV T LP+ R+L DT+GFI +P L++ FK TLE+A +D
Sbjct: 179 ADLLV-ENQLFSTLDVKTCRLKLPSGRRVLISDTVGFIRELPQELIQSFKSTLEEAKFSD 237
Query: 359 IIIHVVDVSNPDYLQQK-QHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD- 416
+++ V+D S+ YL +K + ++ TL+ + E +V+ NK+D GER+ E +
Sbjct: 238 LLVVVLDASD-RYLDEKLEIINSTLRDIGAENVPKLNVI---NKIDKC-TGERLKELGNS 292
Query: 417 ----LLISATRGTGLAQLKEKVQDMILKATGRK 445
+ +SA L +LKEK+ D++L + RK
Sbjct: 293 FPDAVFVSAVLKYNLDELKEKI-DIVLSQSFRK 324
>gi|344924447|ref|ZP_08777908.1| GTPase [Candidatus Odyssella thessalonicensis L13]
Length = 427
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 208/393 (52%), Gaps = 26/393 (6%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
+V + +I L + G+GN+E LK +V + ++ V + + QQ+ L+ +
Sbjct: 41 IVYTQLIQLKKVTPATMIGQGNVEALK-EVISEHQIELVVFDGPLTPV-QQRNLEKAWNC 98
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
V DR ++++IF A+T E RLQ+ +A L Y R R + T++ +G
Sbjct: 99 KVIDRTSLILEIFGERARTAEGRLQVELAALTY--QRSRLVRSWTHLERQRGGFGFTGGP 156
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
L+ R ++ ER ++K L K K R + R+ + +P VA+VGYTN GK+TL
Sbjct: 157 GETQLELDRRMIDERIIRIKTELEKTKRTRSLHRSARADIPYPVVALVGYTNAGKSTLFN 216
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT L ++ LFATLD T + LP+ I+ DT+GFIS++PT L+ F+ TLE+
Sbjct: 217 KLTHAQVLA-KDMLFATLDPTMRQIKLPSGRTIILSDTVGFISHLPTQLIAAFRATLEEV 275
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV-VGNKVDAVPPG----- 408
AD+I+HV D S+PD Q Q V++ L L LE+++ + +V V NK+D + P
Sbjct: 276 CAADLILHVQDCSHPDSTYQAQEVNKVLTELGLEKELEDGTVVNVLNKIDLLAPSHLNLL 335
Query: 409 ERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVS 468
+ +++ +LL+SA G GL L + + + + T + +++G + WL + A+
Sbjct: 336 QERSKKTELLVSAATGAGLDTLLKVIDRQLNRHTQLLEFELPLQAGEA-LAWLYRQGAII 394
Query: 469 NIREDDTSAEHLLLDVVMTDVIMNKFKHEFISS 501
RED ++ HL L + + + KFK F S
Sbjct: 395 G-REDSEASIHLKLQI--SPQALEKFKARFNPS 424
>gi|429757410|ref|ZP_19289946.1| GTP-binding protein HflX [Actinomyces sp. oral taxon 181 str.
F0379]
gi|429175080|gb|EKY16533.1| GTP-binding protein HflX [Actinomyces sp. oral taxon 181 str.
F0379]
Length = 515
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 177/346 (51%), Gaps = 28/346 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G +V+D I D ++ G G L V D T + V D L Q
Sbjct: 95 AALAETAGSQVLDGVIQKRSHPDPATYLGSGKARELAELVAADGADT-IIVDGD-LAPSQ 152
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIED------- 228
++ L+D+ ++ V DR +++ IF HAK+RE + Q+ +A+L YL R R D
Sbjct: 153 RRGLEDVVKIKVVDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGDSMSRQAG 212
Query: 229 ---ATNMNI-------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
A+ I TK LD +R + R KL++ + +++ R+ R + R P+
Sbjct: 213 GRVASGEGIGSRGPGETKIELDRRR--IRNRMAKLREQIRRMEPARQAQRANRSRSTIPS 270
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+ GYTN GK+TL+ ALT D LV + LFATLD T + DT+GF+S
Sbjct: 271 VAIAGYTNAGKSTLLNALTGADVLV-EDALFATLDPTVRRTQTEDGRAYTLSDTVGFVSR 329
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+PT L+E F+ TLE+ AD+I+HVVD ++PD + Q Q V L +E I E L+V
Sbjct: 330 LPTQLVEAFRSTLEEVGEADVILHVVDAAHPDPIGQIQAVHSVLDTIEGARDIPE--LIV 387
Query: 399 GNKVDAVPPGERV----TEEYDLLISATRGTGLAQLKEKVQDMILK 440
NK D +R E +L+SA G G+++L+ + M+ +
Sbjct: 388 FNKADLASDEQRAFVRSLSEGAVLVSAVTGEGISELQTVIASMLPR 433
>gi|420237596|ref|ZP_14742061.1| GTP-binding protein [Parascardovia denticolens IPLA 20019]
gi|391879218|gb|EIT87730.1| GTP-binding protein [Parascardovia denticolens IPLA 20019]
Length = 615
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 175/348 (50%), Gaps = 31/348 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G +V+D + D ++ GKG + V A A + VD L
Sbjct: 176 AALAQTAGAQVMDGVLQHRFKPDSATYVGKGKANEIASIV---AATEADTIVVDADLPPS 232
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HA +RE + Q+ +A+L YL R R A +
Sbjct: 233 QRRALEDVTKVKVVDRTAVILDIFAQHATSREGKAQVELAQLEYLLPRLRGWGAALSRQA 292
Query: 235 ------TKGFLDSK----------RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
G + S+ R ++ R +L+K + ++ RE+ R ++R PT
Sbjct: 293 GGQAAGVNGGIGSRGPGETQIELDRRIIRTRMARLRKQIAQMAPSREIKRGSRRRNALPT 352
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VAVVGYTN GK++LI LT LV N LFATLD + R +YVDT+GF+
Sbjct: 353 VAVVGYTNAGKSSLINRLTGSHELV-ENALFATLDTAVRQSETAENRRFMYVDTVGFVRR 411
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+PT L+E FK TLE+A A +IIHVVD S+PD Q V+ L + I L+V
Sbjct: 412 LPTQLIEAFKSTLEEAADASLIIHVVDASHPDPFAQIDAVNAVLSDVPGVAGIPS--LMV 469
Query: 399 GNKVDAVPPG--ERV----TEEYDLLISATRGTGLAQLKEKVQDMILK 440
NK+D + ER+ E + +SA G GL +LK V+ + K
Sbjct: 470 FNKIDRIDAATLERLRNLAPEAH--FVSAATGQGLEELKAAVEAGLPK 515
>gi|373252561|ref|ZP_09540679.1| GTP-binding protein [Nesterenkonia sp. F]
Length = 564
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 181/340 (53%), Gaps = 31/340 (9%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQD 181
G V+D + D +FFG G E ++ V A + A V VD L Q++ L+D
Sbjct: 167 GSTVLDGFVQRRTHPDPGTFFGAGKAEEIRAAV---AELGADTVVVDSELAPSQRRGLED 223
Query: 182 LFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI------- 234
+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 224 IVKVKVIDRTGLILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESLSRQAGGQVGGG 283
Query: 235 ----------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGY 284
TK LD +R + R +L++ + +K RE R ++R P+VA+ GY
Sbjct: 284 GGMGSRGPGETKIELDRRR--IHSRMARLRRQIAGMKPAREAKRANRRRNSVPSVAIAGY 341
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
TN GK++L+ LTD +V N LFATLD T + P+ + DT+GF+ +PT L+
Sbjct: 342 TNAGKSSLLNQLTDAGVMV-ENALFATLDPTVRKAQTPDGIAYTLSDTVGFVRQLPTQLV 400
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD- 403
E F+ TLE+ +D+I+HVVD S+P+ Q + V E L ++ +++ E LVV NK D
Sbjct: 401 EAFRSTLEEVADSDLILHVVDASHPEPEGQIRAVREVLADVDA-QQVPE--LVVLNKADV 457
Query: 404 ---AVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
AV R E +L+SA G GL +L+E++ D + +
Sbjct: 458 ADWAVVERIRRREPNTVLVSAHSGMGLDELRERISDSVPR 497
>gi|160878692|ref|YP_001557660.1| GTP-binding protein HflX [Clostridium phytofermentans ISDg]
gi|160427358|gb|ABX40921.1| GTP-binding proten HflX [Clostridium phytofermentans ISDg]
Length = 420
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 173/315 (54%), Gaps = 23/315 (7%)
Query: 141 SFFGKGNLE---LLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
++ GKG +E LL Q+ + D L Q + L+D Q V DR MI++ I
Sbjct: 60 TYVGKGKIEEIRLLIEQLGATG-----IICDDELSPAQLRNLEDALQAKVMDRTMIILDI 114
Query: 198 FKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMER 249
F HA TRE ++Q+ +A+L Y TR R + L+ R ++ +R
Sbjct: 115 FAQHASTREGKIQVELAQLKYRATRLIGMRNSLSRLGGGIGTRGPGEKKLEIDRRLIKDR 174
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
+L + L+ +K RE+ R+ + + P VA+VGYTN GK+TL+ LT+ D L N LF
Sbjct: 175 IAQLNRELDDIKRNREVARSLRMKNPIPVVAIVGYTNAGKSTLLNRLTEADVL-EANMLF 233
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD TT L + ++L DT+GFI +P L++ F+ TLE+A ADIIIHVVD SNP
Sbjct: 234 ATLDPTTRNLSLESGQQVLLTDTVGFIRKLPHHLIDAFRSTLEEAKYADIIIHVVDASNP 293
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV---PPGERVTEEYDLLISATRGTG 426
+Q V ETL+ L++ +K V+ V NK D V P + + + + ISA +G G
Sbjct: 294 QAYKQMHIVYETLKKLQVTDKT---VITVFNKQDLVQEEEPMKDLKADKTVKISAKQGVG 350
Query: 427 LAQLKEKVQDMILKA 441
+ +L + +++++ +A
Sbjct: 351 VVELLDIIEEVLREA 365
>gi|357032721|ref|ZP_09094656.1| GTP-binding proten HflX [Gluconobacter morbifer G707]
gi|356413712|gb|EHH67364.1| GTP-binding proten HflX [Gluconobacter morbifer G707]
Length = 435
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/391 (33%), Positives = 194/391 (49%), Gaps = 23/391 (5%)
Query: 94 FIKWGKKMKRNTTR--DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELL 151
+ W K + R D L E+ L +SI G +V I L + + G G +E L
Sbjct: 16 ILPWEKSGPQEEIRAADARLEEAVGLAASI-GLVIVRKAAILLRARRPSTLLGSGQVEQL 74
Query: 152 KRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQI 211
V+ D V V + L QQ+ L+ V DR +++ IF A A TRE LQ+
Sbjct: 75 AEAVKLDG-VDVVIIDAR-LSPGQQRNLEKALGCKVVDRTGLILDIFGARAATREGVLQV 132
Query: 212 AIAELPY-------LWT---RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLK 261
+A L Y LWT R R + +++ R +L ER K+KK L +++
Sbjct: 133 ELAHLEYQRSRLVRLWTHLERQRGGF-GFLGGPGETQMEADRRMLAERIGKIKKELEQVR 191
Query: 262 GQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGML 321
R + R+ ++R FP VA+VGYTN GK+TL ALT S+ NQLFATLD T L
Sbjct: 192 RTRGLHRDARKRVPFPVVALVGYTNAGKSTLFNALTGA-SVQAENQLFATLDPTMRALRL 250
Query: 322 PNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHV--- 378
P+ ++ DT+GFIS +PT L+ F+ TLE+ AD+I+HV DV++PD Q+ V
Sbjct: 251 PSGRNVILSDTVGFISELPTELVAAFRATLEEVSQADVILHVRDVAHPDSAAQRADVLHV 310
Query: 379 -DETLQHLELEEKILEHVLVVGNKVDAVPPGERVTE-EYDLLISATRGTGLAQLKEKVQD 436
D ++ L+ + E + V NK D V + + + E + ISA G G+ L E +
Sbjct: 311 LDSMVRDGMLDAQWPERTIEVLNKADLVGGVQAIPKRENAVAISAITGEGIPDLFEALDQ 370
Query: 437 MILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
+ ++ + + V + G+ WL H V
Sbjct: 371 YLTRSMQDVRVRLSV-TDGAALAWLYDHGEV 400
>gi|154248312|ref|YP_001419270.1| small GTP-binding protein [Xanthobacter autotrophicus Py2]
gi|154162397|gb|ABS69613.1| small GTP-binding protein [Xanthobacter autotrophicus Py2]
Length = 457
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/395 (32%), Positives = 202/395 (51%), Gaps = 29/395 (7%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E+ L ++I VV S I L +F G G +E L+ VR +A V VF
Sbjct: 51 LEEAVGLAAAID-LDVVYSATIPLSEIRPATFLGSGKVEELEGVVRAEA-VDLVFFDA-A 107
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
L QQ+ L+ + V DR ++++IF A+T+E LQ+ +A L Y R R + T
Sbjct: 108 LSPVQQRNLEKAWSAKVVDRTALILEIFGMRARTKEGALQVELAHLNY--QRSRLVRSWT 165
Query: 231 NMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +G +++ R ++ ER +++K L ++K R + R ++R +P V
Sbjct: 166 HLERQRGGFGFLGGPGETQIEADRRLIGERIVRIEKELEQVKRTRGLHRASRKRVPYPIV 225
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL LT + + ++ LFATLD T LP+ RI+ DT+GFIS +
Sbjct: 226 ALVGYTNAGKSTLFNRLTRAEVMA-KDLLFATLDPTLRAVDLPHGTRIILSDTVGFISEL 284
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+ F+ TLE+ + AD+I+HV D+S+PD Q V + L+ L ++ + V+ V
Sbjct: 285 PTQLVAAFRATLEEVLEADLILHVRDISHPDTDAQAADVSDVLEDLGVDPQPGGRVIEVW 344
Query: 400 NKVDAVPPGE---------RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMR 450
NK+D + P E R E + +SA G G L ++ I GR +++
Sbjct: 345 NKIDRLAPDEREQVENRAARGGAEAPVPVSALTGEGTDDLLGLIERRI--TAGRVTVSVT 402
Query: 451 VRS-GGSEYQWLMKHTAVSNIREDDTSAEHLLLDV 484
+ + G WL +H V D+ A H+ L +
Sbjct: 403 LAAEDGEGLGWLYRHGEVLERTTDEDGAIHVALRI 437
>gi|294787528|ref|ZP_06752781.1| GTP-binding protein [Parascardovia denticolens F0305]
gi|315226889|ref|ZP_07868677.1| GTP-binding protein [Parascardovia denticolens DSM 10105 = JCM
12538]
gi|294484884|gb|EFG32519.1| GTP-binding protein [Parascardovia denticolens F0305]
gi|315121021|gb|EFT84153.1| GTP-binding protein [Parascardovia denticolens DSM 10105 = JCM
12538]
Length = 615
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 175/348 (50%), Gaps = 31/348 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G +V+D + D ++ GKG + V A A + VD L
Sbjct: 176 AALAQTAGAQVMDGVLQHRFKPDSATYVGKGKANEIASIV---AATEADTIVVDADLPPS 232
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 233 QRRALEDVTKVKVVDRTAVILDIFAQHATSREGKAQVELAQLEYMLPRLRGWGAALSRQA 292
Query: 235 ------TKGFLDSK----------RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
G + S+ R ++ R +L+K + ++ RE+ R ++R PT
Sbjct: 293 GGQAAGVNGGIGSRGPGETQIELDRRIIRTRMARLRKQIAQMAPSREIKRGSRRRNALPT 352
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VAVVGYTN GK++LI LT LV N LFATLD + R +YVDT+GF+
Sbjct: 353 VAVVGYTNAGKSSLINRLTGSHELV-ENALFATLDTAVRQSETAENRRFMYVDTVGFVRR 411
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+PT L+E FK TLE+A A +IIHVVD S+PD Q V+ L + I L+V
Sbjct: 412 LPTQLIEAFKSTLEEAADASLIIHVVDASHPDPFAQIDAVNAVLSDVPGVAGIPS--LMV 469
Query: 399 GNKVDAVPPG--ERV----TEEYDLLISATRGTGLAQLKEKVQDMILK 440
NK+D + ER+ E + +SA G GL +LK V+ + K
Sbjct: 470 FNKIDRIDAATLERLRNLAPEAH--FVSAATGQGLEELKAAVEAGLPK 515
>gi|254439098|ref|ZP_05052592.1| GTP-binding proten HflX [Octadecabacter antarcticus 307]
gi|198254544|gb|EDY78858.1| GTP-binding proten HflX [Octadecabacter antarcticus 307]
Length = 430
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 133/435 (30%), Positives = 217/435 (49%), Gaps = 42/435 (9%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ +V+ P IK +R+ L E AL ++ V S ++SL FGKG
Sbjct: 9 RAYVLHPEIK-SDNARRHAKS--ALEEGVALAHALPELEVAGSQVVSLPKMHPGMLFGKG 65
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
++ +K + DA V + V + QQ+ L+ + V + DR ++++IF A+TRE
Sbjct: 66 KIQEIKGWLE-DAEAGLVLIDGHVSPV-QQRNLEKEWGVKLLDRTGLILEIFSDRARTRE 123
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKK 255
LQ+ +A L Y R R + T++ +G +++ R + + LKK
Sbjct: 124 GVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQVEADRRAIDLQLNNLKK 181
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L+K+ RE+ R + + FP VA+VGYTN GK+TL LT V + LFATLD T
Sbjct: 182 QLSKVVKTRELHRKARAKVPFPIVALVGYTNAGKSTLFNRLTGASVFV-EDMLFATLDPT 240
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
+ LPN I+ DT+GFIS++PT L+ F+ TLE+ + AD+I+HV D+S+P QK
Sbjct: 241 MRKVDLPNGDAIIMSDTVGFISDLPTQLVASFRATLEEVLEADVILHVRDISHPQSADQK 300
Query: 376 QHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLL------------ISATR 423
+ V +TL+ L++ + ++ V NK+D + P E+ D L SA
Sbjct: 301 KAVLDTLRQLDVNPDV--PMIEVLNKIDLLAP-----EDADYLQALHKDGENVFGTSAVT 353
Query: 424 GTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLD 483
G GL L +++ + + T +T+ GG++ WL + + + DT +D
Sbjct: 354 GQGLDTLLDQITEKLKGTTRALTLTLDWSHGGAQ-SWLQRENVIETTAQTDTG---WTID 409
Query: 484 VVMTDVIMNKFKHEF 498
V + + KF+ +F
Sbjct: 410 VRWSPMQAAKFEKQF 424
>gi|453328963|dbj|GAC88839.1| GTP-binding GTPase [Gluconobacter thailandicus NBRC 3255]
Length = 432
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 129/396 (32%), Positives = 200/396 (50%), Gaps = 20/396 (5%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
H V+ P+ K G + D L E+ L +SI G +V I L + + G
Sbjct: 8 HSAAVILPWEKTGPQEDIRAA-DARLEEAVGLAASI-GLVIVRQAAILLRARRPATLLGS 65
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
G +E L V+ D +V V + L QQ+ L+ V DR +++ IF A A TR
Sbjct: 66 GQVEQLAEAVKLD-QVDVVIIDAR-LSPGQQRNLEKALGCKVMDRTGLILDIFGARAATR 123
Query: 206 EARLQIAIAELPY-------LWTRY--RTIEDATNMNITKGFLDSKRMVLMEREQKLKKA 256
E LQ+ +A L Y LWT + + +++ R +L ER K+KK
Sbjct: 124 EGVLQVELAHLEYQRSRLVRLWTHLERQRGGFGFLGGPGETQMEADRRMLAERIGKIKKE 183
Query: 257 LNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTT 316
L +++ R + R+ ++R FP VA+VGYTN GK+TL ALT S+ ++QLFATLD T
Sbjct: 184 LEQVRRTRGLHRDARKRVPFPIVALVGYTNAGKSTLFNALTGA-SVHAQDQLFATLDPTM 242
Query: 317 HEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQ 376
LP+ ++ DT+GFIS++PT L+ F+ TLE+ AD+I+HV D+++PD Q+
Sbjct: 243 RALRLPSGRNVILSDTVGFISDLPTELIAAFRATLEEVSQADVILHVRDIAHPDSAAQRA 302
Query: 377 HV----DETLQHLELEEKILEHVLVVGNKVDAVPPGERVTE-EYDLLISATRGTGLAQLK 431
V D ++ L+ + E + V NK D + E V + E + ISA G G+ L
Sbjct: 303 DVLNVLDGMVRDGMLDAQWPERTIEVLNKADLMGGVEAVPKRENAVAISAITGDGIPDLF 362
Query: 432 EKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
E + + +A + + ++ G + WL +H V
Sbjct: 363 ETLDQYLTQAMLDIRVQLSLQDGAA-LAWLYQHGEV 397
>gi|46202523|ref|ZP_00053076.2| COG2262: GTPases [Magnetospirillum magnetotacticum MS-1]
Length = 421
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 211/409 (51%), Gaps = 32/409 (7%)
Query: 89 FVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL 148
VV P +K G+ N + LAE+ L +I +V + +++ + GKG +
Sbjct: 1 MVVHPAVKGGEG---NRLPEARLAEAVGLAGAID-LDIVAAEAVNVAKLRPATLMGKGAV 56
Query: 149 ELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREAR 208
E L V + R A+ V L QQ+ L+ + V DR ++++IF A A+TRE
Sbjct: 57 ERLAELV--EERDVALAVVDCHLSPVQQRNLEKAWGCKVIDRTGLILEIFGARARTREGT 114
Query: 209 LQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKAL 257
LQ+ +A L Y R R + T++ +G +++ R ++ ER KL++ L
Sbjct: 115 LQVELAALSY--QRSRLVRSWTHLERQRGGFGFLGGPGETQIEADRRMIGERIVKLEREL 172
Query: 258 NKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTH 317
+K R++ R +++ +P VA+VGYTN GK+TL LT + L ++ LFATLD T
Sbjct: 173 EDVKRTRDLHRKARRKVPYPIVALVGYTNAGKSTLFNQLTRAEVLA-KDMLFATLDPTMR 231
Query: 318 EGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQH 377
+LP+ +I+ DT+GFIS++P L+ F+ TLE+ + ADI++HV D+S+PD Q
Sbjct: 232 TLVLPSGRKIILSDTVGFISDLPHELVAAFRATLEEVLEADIVVHVRDISHPDTEAQSAD 291
Query: 378 VDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD--------LLISATRGTGLAQ 429
VD L+ L L E + ++ NK+D + ER E + + +SA G G+ +
Sbjct: 292 VDTVLKELGLAEVVDRGLVEALNKIDLLDE-ERRHEVLNQARRRDGVMALSAITGQGVDE 350
Query: 430 LKEKVQDMILKATGRKNITMRVRSG-GSEYQWLMKHTAVSNIREDDTSA 477
L ++ + A R+ I + + G G+ WL H V R+D+ A
Sbjct: 351 LLAELDRRLGHA--RETIDVALPLGDGASIAWLYSHGEVVARRDDEAQA 397
>gi|410943656|ref|ZP_11375397.1| GTP-binding protein HflX [Gluconobacter frateurii NBRC 101659]
Length = 435
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 198/391 (50%), Gaps = 23/391 (5%)
Query: 94 FIKWGKKMKRNTTR--DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELL 151
+ W K + R D L E+ L +SI G +V I L + + G G +E L
Sbjct: 16 ILPWEKTGPQEDIRAADARLEEAVGLAASI-GLVIVRQAAILLRARRPATLLGSGQVEQL 74
Query: 152 KRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQI 211
V+ D +V V V L QQ+ L+ V DR +++ IF A A TRE LQ+
Sbjct: 75 AEAVKLD-QVDVVIVDAR-LSPGQQRNLEKALGCKVMDRTGLILDIFGARAATREGVLQV 132
Query: 212 AIAELPY-------LWT---RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLK 261
+A L Y LWT R R + +++ R +L ER K+K+ L K++
Sbjct: 133 ELAHLEYQRSRLVRLWTHLERQRGGF-GFLGGPGETQMEADRRMLAERIGKIKQELEKVR 191
Query: 262 GQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGML 321
R + R+ ++R FP VA+VGYTN GK+TL ALT S+ ++QLFATLD T L
Sbjct: 192 RTRGLHRDARKRVPFPIVALVGYTNAGKSTLFNALTGA-SVHAQDQLFATLDPTMRALRL 250
Query: 322 PNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHV--- 378
P+ ++ DT+GFIS++PT L+ F+ TLE+ AD+I+HV D+++PD Q+ V
Sbjct: 251 PSGRNVILSDTVGFISDLPTELIAAFRATLEEVSQADVILHVRDIAHPDSAAQRADVLNV 310
Query: 379 -DETLQHLELEEKILEHVLVVGNKVDAVPPGERVTE-EYDLLISATRGTGLAQLKEKVQD 436
D ++ L+ + E + V NK D + E V + E + ISA G G+ L E +
Sbjct: 311 LDGMVRDGMLDAQWPERTIEVLNKADLMGGVEAVPKRENAVAISAITGDGIPDLFETLDQ 370
Query: 437 MILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
+ +A + + ++ GS WL +H V
Sbjct: 371 YLTQAMLDIRVQLSLQD-GSALAWLYQHGEV 400
>gi|254442831|ref|ZP_05056307.1| GTP-binding proten HflX [Verrucomicrobiae bacterium DG1235]
gi|198257139|gb|EDY81447.1| GTP-binding proten HflX [Verrucomicrobiae bacterium DG1235]
Length = 435
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/325 (35%), Positives = 174/325 (53%), Gaps = 26/325 (8%)
Query: 127 VDSTIISLLSFDKKSFFGKGNLELL---KRQVRGDARVTAVFVSVDVLKLHQQKMLQDLF 183
VD ++ L + G G ++ L +++ D V + D L QQ+ +
Sbjct: 48 VDRVVVKLRKANPAFLLGTGKVQELIAHAKEIEAD-----VIIFDDELTPAQQRNWEAEA 102
Query: 184 QVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYR---------TIEDATNMNI 234
++ V DR I+I IF A T+EA LQ+A+A + Y R R
Sbjct: 103 KIAVIDRQEIIIDIFSERAHTKEASLQVALARMEYSLPRLRRAWTHLSRQRGGGTGARGQ 162
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ L++ ++ +R KK L ++ R + R K+ R+ PTVA+VGYTN GK++L+
Sbjct: 163 GETQLEADSRMIRDRIAITKKELKEVIQHRHVQRAKRLRKPVPTVAIVGYTNAGKSSLLN 222
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
+TD D L ++LFATLD TT L N +L DT+GF+ +P L+E FK TLE+A
Sbjct: 223 TMTDSDVLAA-DKLFATLDPTTRRLELDNSQHVLVTDTVGFVRRLPHRLVEAFKATLEEA 281
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP-PGER--- 410
++AD++IHVVDV+NPD + Q E L+ +E ++ + LVV NK+DA+ P +R
Sbjct: 282 VVADLLIHVVDVTNPDAEKHFQTTMEVLKEIEADKNPM---LVVFNKIDALEDPSDRERF 338
Query: 411 -VTEEYDLLISATRGTGLAQLKEKV 434
T + L ISA G G+A+LKE +
Sbjct: 339 MFTHKDALYISANTGEGIAELKETI 363
>gi|452964778|gb|EME69812.1| GTPase [Magnetospirillum sp. SO-1]
Length = 435
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 211/409 (51%), Gaps = 28/409 (6%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ VV P K G+ + R LAE+ L +I +V + +++ + GKG
Sbjct: 13 RALVVHPAFKGGEGSRLPEAR---LAEAVGLAGAID-LDIVAAEAVNVAKVRPATLMGKG 68
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
+E L V + R A+ V L QQ+ L+ + V DR ++++IF A A+TRE
Sbjct: 69 AVERLAELV--EEREIALAVVDGHLSPVQQRNLEKAWGCKVIDRTGLILEIFGARARTRE 126
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKK 255
LQ+ +A L Y R R + T++ +G +++ R ++ +R KL++
Sbjct: 127 GTLQVELAALSY--QRSRLVRSWTHLERQRGGFGFLGGPGETQIEADRRMIGDRIIKLER 184
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L+ +K R++ R +++ +P VA+VGYTN GK+TL LT + ++ ++ LFATLD T
Sbjct: 185 ELDDVKRTRDLHRKARRKVPYPIVALVGYTNAGKSTLFNQLTRAE-VMAKDMLFATLDPT 243
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
+LP+ +I+ DT+GFIS++P L+ F+ TLE+ + AD+++HV DVS+PD Q
Sbjct: 244 MRTLVLPSGRKIILSDTVGFISDLPHELVAAFRATLEEVLEADVVVHVRDVSHPDTEAQA 303
Query: 376 QHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT-------EEYDLLISATRGTGLA 428
VD L+ L L E + ++ NK+D + R+ + + +SA G G+
Sbjct: 304 ADVDTVLRELGLAEVVDRGLVEALNKIDLLDGHGRMEVLNQAKRRDGAMALSAVTGEGVD 363
Query: 429 QLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSA 477
+L ++ + A ++ + + S G+ WL H V R+D+ A
Sbjct: 364 ELLAELDRRLGAARETIDVALPL-SDGASIAWLYSHGEVVARRDDEAQA 411
>gi|294791503|ref|ZP_06756660.1| GTP-binding protein [Scardovia inopinata F0304]
gi|294457974|gb|EFG26328.1| GTP-binding protein [Scardovia inopinata F0304]
Length = 540
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 178/359 (49%), Gaps = 26/359 (7%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR 156
W + + + L E AL + G +V++ + D ++ GKG L V
Sbjct: 110 WSSRDSSQSQAEESLRELAALAQTA-GAQVMEGVLQHRFKPDPATYIGKGKAGELAAIVA 168
Query: 157 GDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAEL 216
+ + V D L Q++ L+D+ +V V DR +++ IF HA +RE + Q+ +A+L
Sbjct: 169 A-TQADTIIVDAD-LPPSQRRALEDVTKVKVVDRTAVILDIFAQHATSREGKAQVELAQL 226
Query: 217 PYLWTRYRTIEDATN-------MNITKGF---------LDSKRMVLMEREQKLKKALNKL 260
Y+ R R A + + G L+ R V+ R +L+K + ++
Sbjct: 227 EYMLPRLRGWGAALSRQAGGQAAGVNGGIGSRGPGETQLELDRRVIRTRMARLRKQIARM 286
Query: 261 KGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGM 320
R++ R ++R PTVAVVGYTN GK++LI LT+ LV N LFATLD +
Sbjct: 287 APARDIKRGSRRRNSLPTVAVVGYTNAGKSSLINRLTNSHELV-ENALFATLDTAVRQSK 345
Query: 321 LPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDE 380
+ + +YVDT+GF+ +PT L+E FK TLE+ A +I+HVVD+S PD Q V++
Sbjct: 346 TADSRKFMYVDTVGFVRRLPTQLIEAFKSTLEEVAQASLIVHVVDISYPDPFSQIDAVNK 405
Query: 381 TLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEY----DLLISATRGTGLAQLKEKVQ 435
L + E I L+V NKVD V R E +SA G G+ +L+ VQ
Sbjct: 406 VLADVPGVEGI--PTLMVFNKVDRVDNTTRQRIENLAPDAFFVSAATGEGIDRLRHAVQ 462
>gi|433455351|ref|ZP_20413435.1| GTP-binding protein [Arthrobacter crystallopoietes BAB-32]
gi|432197738|gb|ELK54103.1| GTP-binding protein [Arthrobacter crystallopoietes BAB-32]
Length = 516
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 117/349 (33%), Positives = 179/349 (51%), Gaps = 30/349 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+D + L D +F G G + L+ V T + S L Q
Sbjct: 120 AALAETAGSEVLDGVVQRRLKPDPGTFLGSGKAQELRDIVMSTGADTVIVDSE--LSPSQ 177
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI- 234
++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 178 RRGLEDIVKVKVIDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQAG 237
Query: 235 -----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
TK LD +R + R KL++ + +K RE R ++R P
Sbjct: 238 GRVGAAGGGIGSRGPGETKIELDRRR--IRTRMAKLRREITGMKPARETKRANRKRHAVP 295
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+VA+VGYTN GK++L+ LT+ LV N LFATLD T + + L DT+GF+
Sbjct: 296 SVAIVGYTNAGKSSLLNRLTNAGVLV-ENALFATLDPTVRKAETADGLGYTLADTVGFVR 354
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
++PT L+E F+ TLE+A AD+++HVVD S+PD Q V E L ++ KI E +V
Sbjct: 355 SLPTQLVEAFRSTLEEAADADLLLHVVDASHPDPEGQIAAVREVLAEVDA-RKIPE--IV 411
Query: 398 VGNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILKAT 442
V NK DA P R E +++SA G G+ +L + + I + T
Sbjct: 412 VLNKADAADPFTIERLRRREPRHVVVSARTGQGIPELLQAISGGIPRPT 460
>gi|154253563|ref|YP_001414387.1| GTP-binding protein HSR1-like [Parvibaculum lavamentivorans DS-1]
gi|154157513|gb|ABS64730.1| GTP-binding protein HSR1-related [Parvibaculum lavamentivorans
DS-1]
Length = 474
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 225/440 (51%), Gaps = 39/440 (8%)
Query: 87 QVFVVQPFIKW-GKKMKRNT---TRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSF 142
+ FVV P++K K+ KR + + L E+ L ++I VV S ++ L S +
Sbjct: 27 RAFVVVPWLKSVAKQAKRGGGGRSPESRLDEAVGLAAAIS-LNVVGSVVVPLASPRPATL 85
Query: 143 FGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHA 202
FG+G ++ +K Q+ + RV V V L QQ+ L+ + V V DR ++++IF A
Sbjct: 86 FGEGKVDEIKGQI-AELRVDLVIVD-GALGPGQQRNLEKAWNVKVLDRTGLILEIFGERA 143
Query: 203 KTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQ 251
+TRE LQ+ +A L Y + R + T++ +G +++ R ++ ER
Sbjct: 144 RTREGSLQVELAHLNY--QKSRLVRSWTHLERQRGGFGFLGGPGETQIEADRRLIQERIA 201
Query: 252 KLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFAT 311
K++ L +K RE+ R K++ +P VA+VGYTN GK+TL LT+ + N LFAT
Sbjct: 202 KIEHQLETVKRTRELHRKKRREAPYPIVALVGYTNAGKSTLFNRLTEA-GVFAENLLFAT 260
Query: 312 LDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDY 371
LD T +LP+ +I+ DT+GFIS++PT L+ F+ TLE+ + A++I+HV D ++ +
Sbjct: 261 LDPTMRALVLPSGRKIILSDTVGFISDLPTHLVAAFRATLEEVLEAEVILHVRDAAHEET 320
Query: 372 LQQKQHVDETLQHLELEEKIL----EHVLVVGNKVDAVPPGE--------RVTEEYDLLI 419
QK V++ L L + + +HV+ V NK+D + GE + E + +
Sbjct: 321 AIQKTDVEKVLTSLGVTRESTAANGQHVVDVLNKIDLL-EGEFRDAAVNLAMREPMTVAV 379
Query: 420 SATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG-GSEYQWLMKHTAVSNIREDDTSAE 478
SA G G L + +I+ + + V + G WL + + N + D
Sbjct: 380 SALTGDGTENLLNLIDSLIVD--DERPVHFDVPANEGEAIAWLHANAHIRNRVDGDEGIV 437
Query: 479 HLLLDVVMTDVIMNKFKHEF 498
H LD+ +T ++ +F+ F
Sbjct: 438 H--LDLGLTPIVAGRFEKRF 455
>gi|440802114|gb|ELR23053.1| GTPbinding protein HflX, putative [Acanthamoeba castellanii str.
Neff]
Length = 594
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 212/430 (49%), Gaps = 52/430 (12%)
Query: 57 SDNSQDDLEESDEFKTIRDEAQTGALGT---DHQVFVVQPFIK---WGKKMKRNTT---- 106
S +S+ EE D + D Q G + +V VV P+++ + K KR +
Sbjct: 100 SQSSRRKEEEGDSGRQALDAMQPGRFWSATRPPRVCVVHPYMRNTVYADKRKRRLSLLAE 159
Query: 107 -------------RDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKR 153
D L E+ ALV +++ W V DS +++ + + F GKG + L R
Sbjct: 160 REEEEQVCRGQDHPDLRLKEAVALVEALE-WPVEDSMYLTVNTVNPSHFLGKGKIAEL-R 217
Query: 154 QVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAI 213
Q R V + + L Q + L + V DRY ++++IF A++ E+RLQ+ +
Sbjct: 218 QACQAKRADVVVMDTNSLTPAQGQKLAKMLGTRVMDRYRLILEIFAQRAQSEESRLQVEL 277
Query: 214 AELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKG 262
A L Y ++ ++ ++ +G L+ +R L+ RE+K+K L L+
Sbjct: 278 AGLAYKSVHLKSAMESKHLAQQRGGGAFLSGAGETNLEIERRHLVVREKKIKARLEVLQK 337
Query: 263 QREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLP 322
R++ R +++Q PT+A++GYTN GK+ L+ L SLV +NQLFA+L + LP
Sbjct: 338 TRKLHRESRKKQDIPTIAILGYTNAGKSALLNRLCGT-SLVSQNQLFASLHTFMRKIELP 396
Query: 323 NRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHV---- 378
+ L DT+GFISN+P L+ PF TLE+ AD+++HV D++N + QK +V
Sbjct: 397 SGCCALAADTVGFISNLPHGLVAPFHSTLEEIGSADVLLHVRDITNAETEMQKANVHKVM 456
Query: 379 -------DETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLK 431
D QHLE+ KI L+ ++D++ +RV + ISA G G L
Sbjct: 457 KEIGLDTDPDTQHLEVWNKI---DLMDDARLDSLVTTQRVLGKRIFPISARTGAGCDDLL 513
Query: 432 EKVQDMILKA 441
+ + D L+A
Sbjct: 514 QAI-DQRLQA 522
>gi|225570790|ref|ZP_03779813.1| hypothetical protein CLOHYLEM_06893 [Clostridium hylemonae DSM
15053]
gi|225160252|gb|EEG72871.1| hypothetical protein CLOHYLEM_06893 [Clostridium hylemonae DSM
15053]
Length = 424
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 169/309 (54%), Gaps = 17/309 (5%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG LE LK + + T + D L Q LQD V V DR ++++ IF +
Sbjct: 57 TYIGKGKLEELKDLI-WETYATGIICD-DELSPAQMGNLQDELDVKVMDRTLVILDIFAS 114
Query: 201 HAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQK 252
A T E ++Q+ +A+L Y +R R + L+ R ++ R +
Sbjct: 115 RASTSEGKIQVELAQLKYRQSRLTGFGKSLSRLGGGIGTRGPGEKKLEMDRRLIKGRIAQ 174
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
L + L +K RE+ R ++ R + P AVVGYTN GK+TL+ ALT D ++ ++LFATL
Sbjct: 175 LNRELRDVKRHREVTREQRSRNQVPVAAVVGYTNAGKSTLLNALTGAD-ILAEDKLFATL 233
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT E LP++ +L DT+GFI +P L+E F+ TLE+A AD+I+HVVD +NP
Sbjct: 234 DPTTRELKLPSKQSVLLTDTVGFIRKLPHHLIEAFRSTLEEAKYADMILHVVDTANPQMD 293
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTE---EYDLLISATRGTGLAQ 429
+Q V ETL+ L +++K V+ V NK D V + +Y + ISA GL +
Sbjct: 294 EQMHIVYETLRSLGVKDK---PVITVFNKQDKEGAQRTVRDFQADYTVRISAKTTEGLDE 350
Query: 430 LKEKVQDMI 438
LKE ++ ++
Sbjct: 351 LKEMIEAVL 359
>gi|414342884|ref|YP_006984405.1| GTP-binding proten HflX [Gluconobacter oxydans H24]
gi|411028219|gb|AFW01474.1| GTP-binding proten HflX [Gluconobacter oxydans H24]
Length = 435
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 198/391 (50%), Gaps = 23/391 (5%)
Query: 94 FIKWGKKMKRNTTR--DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELL 151
+ W K + R D L E+ L +SI G +V I L + + G G +E L
Sbjct: 16 ILPWEKTGPQEDIRAADARLEEAVGLAASI-GLVIVRQAAILLRARRPATLLGSGQVEQL 74
Query: 152 KRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQI 211
V+ D +V V + L QQ+ L+ V DR +++ IF A A TRE LQ+
Sbjct: 75 AEAVKLD-QVDVVIIDAR-LSPGQQRNLEKALGCKVMDRTGLILDIFGARAATREGVLQV 132
Query: 212 AIAELPY-------LWT---RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLK 261
+A L Y LWT R R + +++ R +L ER K+KK L +++
Sbjct: 133 ELAHLEYQRSRLVRLWTHLERQRGGF-GFLGGPGETQMEADRRMLAERIGKIKKELEQVR 191
Query: 262 GQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGML 321
R + R+ ++R FP VA+VGYTN GK+TL ALT S+ ++QLFATLD T L
Sbjct: 192 RTRGLHRDARKRVPFPIVALVGYTNAGKSTLFNALTGA-SVHAQDQLFATLDPTMRALRL 250
Query: 322 PNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHV--- 378
P+ ++ DT+GFIS++PT L+ F+ TLE+ AD+I+HV D+++PD Q+ V
Sbjct: 251 PSGRNVILSDTVGFISDLPTELIAAFRATLEEVSQADVILHVRDIAHPDSAAQRADVLNV 310
Query: 379 -DETLQHLELEEKILEHVLVVGNKVDAVPPGERVTE-EYDLLISATRGTGLAQLKEKVQD 436
D ++ L+ + E + V NK D + E V + E + ISA G G+ L E +
Sbjct: 311 LDGMVRDGMLDAQWPERTIEVLNKADLMGGVEAVPKRENAVAISAITGDGIPDLFETLDQ 370
Query: 437 MILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
+ +A + + ++ G + WL +H V
Sbjct: 371 YLTQAMLDIRVQLSLQDGAA-LAWLYQHGEV 400
>gi|386867364|ref|YP_006280358.1| GTP-binding protein [Bifidobacterium animalis subsp. animalis ATCC
25527]
gi|385701447|gb|AFI63395.1| GTP-binding protein [Bifidobacterium animalis subsp. animalis ATCC
25527]
Length = 515
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 185/362 (51%), Gaps = 33/362 (9%)
Query: 105 TTRDFMLAESK------ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGD 158
++R++ LA+++ A ++ G V D + D S+ G G + V +
Sbjct: 91 SSREWTLAQAEESLRELAALAETAGAEVCDGVLQQRSRPDGTSYVGSGKAREIADIVAAN 150
Query: 159 ARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY 218
T + V D L Q++ L+DL V V DR +++ IF HA +RE + Q+ +A+L Y
Sbjct: 151 DADT-IIVDAD-LPPSQRRALEDLTHVKVVDRTAVILDIFAQHATSREGKAQVELAQLQY 208
Query: 219 LWTRYRTIEDATN------------MNITKGFLDSK----RMVLMEREQKLKKALNKLKG 262
+ R R A + ++G ++K R V+ R +L+K + ++ G
Sbjct: 209 MLPRLRGWGAALSRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRTRIARLRKQIKEMSG 268
Query: 263 QREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLP 322
RE+ R ++R PT+AVVGYTN GK++L LT LV N LFATLD
Sbjct: 269 TREVKRGSRRRYGLPTIAVVGYTNAGKSSLTNRLTGSTELV-ENALFATLDTAVRRTQTR 327
Query: 323 NRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETL 382
+ YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q V+E L
Sbjct: 328 DGRLYAYVDTVGFVRRLPTNLVEAFKSTLEEIADADLIVHVVDASHPDPFSQIDAVNEVL 387
Query: 383 QHLELEEKILEHVLVVGNKVDAVPPGER-----VTEEYDLLISATRGTGLAQLKEKVQDM 437
Q ++ E++ V+ V NK D + +R + + + SAT G G+ L+ V+ M
Sbjct: 388 QTIDGVERL--PVITVFNKADLIDDAKRERLHALAPDAHIASSAT-GEGVDALRADVESM 444
Query: 438 IL 439
++
Sbjct: 445 LV 446
>gi|323136434|ref|ZP_08071516.1| GTP-binding proten HflX [Methylocystis sp. ATCC 49242]
gi|322398508|gb|EFY01028.1| GTP-binding proten HflX [Methylocystis sp. ATCC 49242]
Length = 444
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/418 (31%), Positives = 214/418 (51%), Gaps = 41/418 (9%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRD--FMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFG 144
+ VV P++ G +RD L+E+ L +I +V +SL ++ G
Sbjct: 18 RALVVGPYLSRGAAA---LSRDPHARLSEAVGLAQAID-LDIVGDISVSLNEVRPATYLG 73
Query: 145 KGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAK 203
KG ++ + V+ A VS+D L QQ+ L+ + V DR ++++IF A+
Sbjct: 74 KGKVDEIAETVK---EREAGLVSMDCQLSPVQQRNLEKAWGAKVIDRTGLILEIFGQRAR 130
Query: 204 TREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQK 252
T+E LQ+ +A L Y + R + T++ +G +++ R ++ ER ++
Sbjct: 131 TKEGALQVELAHLAY--QKSRLVRSWTHLERQRGGFGFLGGPGETQIETDRRLIEERMRR 188
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
+++ L+K+K R + R ++ +P VA+VGYTN GK+TL LT + L ++ LFATL
Sbjct: 189 IEQDLDKVKRTRGLHRKTRREVPYPVVALVGYTNAGKSTLFNRLTKAEVLA-QDMLFATL 247
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D T + LP+ R+L DT+GFIS++PT L+ F+ TLE+ LAD+I+HV DVS+ D
Sbjct: 248 DPTLRQIRLPHGARVLLSDTVGFISDLPTMLVSAFRATLEEVTLADVILHVRDVSHEDSE 307
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER------VTEEYD-----LLISA 421
Q + V+ L L L+ + +L V NK+DA+ P ER +D +L SA
Sbjct: 308 AQARDVETILDELGLKGEAEGRILEVWNKIDALDP-ERQEALRQTARGFDPQRRPVLASA 366
Query: 422 TRGTGLAQLKEKVQDMILKATGRKNITMRVRS-GGSEYQWLMKHTAV--SNIREDDTS 476
G GL +L +++ ++ A R + + + G WL H V RED S
Sbjct: 367 LTGQGLDELLARIETIL--AASRVTLALELEPEDGQGLAWLHAHAEVLTREAREDGGS 422
>gi|329114580|ref|ZP_08243339.1| GTP-binding protein HflX [Acetobacter pomorum DM001]
gi|326696060|gb|EGE47742.1| GTP-binding protein HflX [Acetobacter pomorum DM001]
Length = 439
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 196/379 (51%), Gaps = 24/379 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E+ L +SI G +V ++ L S + GKG ++ L+ + A V V
Sbjct: 38 LEEAVGLTASI-GLVIVRKDVLLLRSRRSATLLGKGQVDSLR--IAVKADQVDVVVVDAK 94
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT-- 221
L QQ+ L+ V DR +++ IF A A T+E LQ+ +A L Y LWT
Sbjct: 95 LSPAQQRNLETECGCKVIDRTGLILDIFGARAATKEGTLQVELAHLEYQRSRLVRLWTHL 154
Query: 222 -RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
R R +RM+ +R +LKK L +++ R + R ++R FP VA
Sbjct: 155 ERQRGGFGFLGGPGETQIEADRRMI-GDRIVRLKKDLEQVRRTRGLHRQARKRVPFPVVA 213
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+VGYTN GK+TL ALT ++ ++QLFATLD T LP+ R++ DT+GFIS++P
Sbjct: 214 LVGYTNAGKSTLFNALTGA-TVYAQDQLFATLDPTMRAIDLPSGRRVILSDTVGFISDLP 272
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLE----LEEKILEHVL 396
T L+ F+ TLE+ ADII+HV DV++PD QK+ V L+ + LE+ E ++
Sbjct: 273 TELIAAFRATLEEVAEADIILHVRDVAHPDSAAQKKDVLGVLEGMAKDDMLEQDWPERII 332
Query: 397 VVGNKVDAVPPGERVTEEYD-LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVR-SG 454
V NKVD + E + + D + ISA G GL L ++ I + G + + R+ +
Sbjct: 333 EVLNKVDLLGGPEAIPQTEDTIAISAITGDGLETLLARIDARITQ--GMETVRYRLPLAD 390
Query: 455 GSEYQWLMKHTAVSNIRED 473
G+ WL +H V RED
Sbjct: 391 GAASAWLYQHGEVVA-RED 408
>gi|83858322|ref|ZP_00951844.1| GTP-binding protein HflX [Oceanicaulis sp. HTCC2633]
gi|83853145|gb|EAP90997.1| GTP-binding protein HflX [Oceanicaulis sp. HTCC2633]
Length = 443
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 190/365 (52%), Gaps = 31/365 (8%)
Query: 127 VDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVP 186
++ I L + FFG G + + +V+ DA +T V + L QQ+ L+
Sbjct: 45 AEARIEPLRRVEASGFFGTGKIAQIAERVK-DAEITVVIIDA-ALSPIQQRNLEKKLNAK 102
Query: 187 VFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY-RTIEDATNMNITKGFL------ 239
V DR ++++IF A+TRE RLQ+ +A L Y +R RT +GFL
Sbjct: 103 VIDRTGLILEIFGLRAQTREGRLQVELARLAYERSRLVRTWTHLERQRGGRGFLAGPGET 162
Query: 240 --DSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALT 297
++ R +L ++ KL++ L+++K R + R K+Q +PTVA+VGYTN GK+TL L+
Sbjct: 163 QIETDRRILADKMAKLRRELDEVKRTRSLHRKKRQTAPWPTVALVGYTNAGKSTLFNLLS 222
Query: 298 DDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLA 357
D L ++ FATLD T LP+ R+L DT+GFI+++PT L+ F+ TLE+ + A
Sbjct: 223 DAQVLA-KDMPFATLDPTVRGVKLPSGRRVLMSDTVGFITDLPTELIAAFRATLEEVIEA 281
Query: 358 DIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE-------- 409
D++IHV D+++PD+ +K V+ L L + +HV+ NK D + +
Sbjct: 282 DVLIHVRDMADPDHEGRKADVESVLAALGAGAEADQHVIEAWNKADQLSAEDHEELVWRA 341
Query: 410 ----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLM--- 462
R ++ SA G G+ L E+V+ A ++ +R+ G S+ + L
Sbjct: 342 KLPKRDNGPVSIVTSAVTGAGVDALLEQVE----LALSVDDVALRLEFGPSDAEALAFVH 397
Query: 463 KHTAV 467
+H A+
Sbjct: 398 RHGAI 402
>gi|219683278|ref|YP_002469661.1| GTP-binding proten HflX [Bifidobacterium animalis subsp. lactis
AD011]
gi|384194236|ref|YP_005579982.1| GTP-binding protein HflX [Bifidobacterium animalis subsp. lactis
BLC1]
gi|219620928|gb|ACL29085.1| GTP-binding proten HflX [Bifidobacterium animalis subsp. lactis
AD011]
gi|345283095|gb|AEN76949.1| GTP-binding protein HflX [Bifidobacterium animalis subsp. lactis
BLC1]
Length = 506
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 176/345 (51%), Gaps = 27/345 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V D + D S+ G G + V + T + V D L Q
Sbjct: 99 AALAETAGAEVCDGVLQQRSRPDGTSYVGSGKAREIADIVAANDADT-IIVDAD-LPPSQ 156
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN---- 231
++ L+DL V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 157 RRALEDLTHVKVVDRTAVILDIFAQHATSREGKAQVELAQLQYMLPRLRGWGAALSRQAG 216
Query: 232 --------MNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++G ++K R V+ R +L+K + ++ G RE+ R ++R PT+
Sbjct: 217 GRAAGADAGIGSRGPGETKIEMDRRVIRTRIARLRKQIKEMSGTREVKRGSRRRYGLPTI 276
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GK++L LT LV N LFATLD + YVDT+GF+ +
Sbjct: 277 AVVGYTNAGKSSLTNRLTGSTELV-ENALFATLDTAVRRTQTRDGRLYAYVDTVGFVRRL 335
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E FK TLE+ AD+I+HVVD S+PD Q V+E LQ ++ E++ V+ V
Sbjct: 336 PTNLVEAFKSTLEEIADADLIVHVVDASHPDPFSQIDAVNEVLQTIDGVERL--PVITVF 393
Query: 400 NKVDAVPPGER-----VTEEYDLLISATRGTGLAQLKEKVQDMIL 439
NK D + +R + + ++ SAT G G+ L+ V+ M++
Sbjct: 394 NKADLIDDAKRERLHALAPDAHIVSSAT-GEGVDALRADVESMLV 437
>gi|183602407|ref|ZP_02963773.1| GTP-binding protein [Bifidobacterium animalis subsp. lactis HN019]
gi|241191239|ref|YP_002968633.1| GTP-binding protein [Bifidobacterium animalis subsp. lactis Bl-04]
gi|241196645|ref|YP_002970200.1| GTP-binding protein [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|384195801|ref|YP_005581546.1| GTP-binding protein [Bifidobacterium animalis subsp. lactis V9]
gi|387821108|ref|YP_006301151.1| GTP-binding protein HflX [Bifidobacterium animalis subsp. lactis
B420]
gi|387822788|ref|YP_006302737.1| GTP-binding protein HflX [Bifidobacterium animalis subsp. lactis
Bi-07]
gi|423679768|ref|ZP_17654644.1| GTP-binding protein [Bifidobacterium animalis subsp. lactis BS 01]
gi|183218326|gb|EDT88971.1| GTP-binding protein [Bifidobacterium animalis subsp. lactis HN019]
gi|240249631|gb|ACS46571.1| GTP-binding protein [Bifidobacterium animalis subsp. lactis Bl-04]
gi|240251199|gb|ACS48138.1| GTP-binding protein [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|295794232|gb|ADG33767.1| GTP-binding protein [Bifidobacterium animalis subsp. lactis V9]
gi|366040767|gb|EHN17280.1| GTP-binding protein [Bifidobacterium animalis subsp. lactis BS 01]
gi|386653809|gb|AFJ16939.1| GTP-binding protein HflX [Bifidobacterium animalis subsp. lactis
B420]
gi|386655396|gb|AFJ18525.1| GTP-binding protein HflX [Bifidobacterium animalis subsp. lactis
Bi-07]
Length = 515
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 176/345 (51%), Gaps = 27/345 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V D + D S+ G G + V + T + V D L Q
Sbjct: 108 AALAETAGAEVCDGVLQQRSRPDGTSYVGSGKAREIADIVAANDADT-IIVDAD-LPPSQ 165
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN---- 231
++ L+DL V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 166 RRALEDLTHVKVVDRTAVILDIFAQHATSREGKAQVELAQLQYMLPRLRGWGAALSRQAG 225
Query: 232 --------MNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++G ++K R V+ R +L+K + ++ G RE+ R ++R PT+
Sbjct: 226 GRAAGADAGIGSRGPGETKIEMDRRVIRTRIARLRKQIKEMSGTREVKRGSRRRYGLPTI 285
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GK++L LT LV N LFATLD + YVDT+GF+ +
Sbjct: 286 AVVGYTNAGKSSLTNRLTGSTELV-ENALFATLDTAVRRTQTRDGRLYAYVDTVGFVRRL 344
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E FK TLE+ AD+I+HVVD S+PD Q V+E LQ ++ E++ V+ V
Sbjct: 345 PTNLVEAFKSTLEEIADADLIVHVVDASHPDPFSQIDAVNEVLQTIDGVERL--PVITVF 402
Query: 400 NKVDAVPPGER-----VTEEYDLLISATRGTGLAQLKEKVQDMIL 439
NK D + +R + + ++ SAT G G+ L+ V+ M++
Sbjct: 403 NKADLIDDAKRERLHALAPDAHIVSSAT-GEGVDALRADVESMLV 446
>gi|384189863|ref|YP_005575611.1| protein HflX [Bifidobacterium animalis subsp. lactis BB-12]
gi|384192653|ref|YP_005578400.1| protein HflX [Bifidobacterium animalis subsp. lactis CNCM I-2494]
gi|289177355|gb|ADC84601.1| HflX [Bifidobacterium animalis subsp. lactis BB-12]
gi|340365390|gb|AEK30681.1| HflX [Bifidobacterium animalis subsp. lactis CNCM I-2494]
Length = 523
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 176/345 (51%), Gaps = 27/345 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V D + D S+ G G + V + T + V D L Q
Sbjct: 116 AALAETAGAEVCDGVLQQRSRPDGTSYVGSGKAREIADIVAANDADT-IIVDAD-LPPSQ 173
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI- 234
++ L+DL V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 174 RRALEDLTHVKVVDRTAVILDIFAQHATSREGKAQVELAQLQYMLPRLRGWGAALSRQAG 233
Query: 235 -----------TKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++G ++K R V+ R +L+K + ++ G RE+ R ++R PT+
Sbjct: 234 GRAAGADAGIGSRGPGETKIEMDRRVIRTRIARLRKQIKEMSGTREVKRGSRRRYGLPTI 293
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GK++L LT LV N LFATLD + YVDT+GF+ +
Sbjct: 294 AVVGYTNAGKSSLTNRLTGSTELV-ENALFATLDTAVRRTQTRDGRLYAYVDTVGFVRRL 352
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E FK TLE+ AD+I+HVVD S+PD Q V+E LQ ++ E++ V+ V
Sbjct: 353 PTNLVEAFKSTLEEIADADLIVHVVDASHPDPFSQIDAVNEVLQTIDGVERL--PVITVF 410
Query: 400 NKVDAVPPGER-----VTEEYDLLISATRGTGLAQLKEKVQDMIL 439
NK D + +R + + ++ SAT G G+ L+ V+ M++
Sbjct: 411 NKADLIDDAKRERLHALAPDAHIVSSAT-GEGVDALRADVESMLV 454
>gi|258516724|ref|YP_003192946.1| GTP-binding proten HflX [Desulfotomaculum acetoxidans DSM 771]
gi|257780429|gb|ACV64323.1| GTP-binding proten HflX [Desulfotomaculum acetoxidans DSM 771]
Length = 414
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 174/338 (51%), Gaps = 33/338 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD-VLKLH 174
A ++ G VDS I D K F GKG E ++ R + A V D L
Sbjct: 30 AALADTAGAEAVDSFIQRRNRPDSKYFIGKGKAEETSQRCR---ELEAQLVIFDHELSPS 86
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTI 226
Q + L DL +V V DR +++ IF A T+E +LQ+ +A+L YL R R
Sbjct: 87 QIRNLIDLMEVRVLDRTQLILDIFAQRASTKEGKLQVELAQLKYLLPRLTGQGKFLSRLG 146
Query: 227 EDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTN 286
+ L++ R L ER ++ L ++K R ++R K R++ P V++VGYTN
Sbjct: 147 GGIGTRGPGETKLETDRRRLRERIVDIQAELEEVKKHRALLR--KGRKQVPVVSLVGYTN 204
Query: 287 CGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEP 346
GK+TL+ LT D LV ++LFATLD TT + +LPN IL DT+GFI N+P L+
Sbjct: 205 AGKSTLLNKLTGSDVLV-EDKLFATLDPTTRQVILPNNDEILVTDTVGFIQNLPHHLVAA 263
Query: 347 FKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP 406
F+ TLE+ + AD+++HVVD ++P+ +Q + V L LE+E K ++V NK D +P
Sbjct: 264 FRATLEEVIEADLLLHVVDSTHPNCFEQYKAVQSVLSSLEVENK---PSILVLNKADGLP 320
Query: 407 ----------PGERVTEEYDLLISATRGTGLAQLKEKV 434
G VT ISA G GL L E +
Sbjct: 321 KPDLNLWINIAGTPVTA-----ISALTGEGLPGLLETI 353
>gi|302386875|ref|YP_003822697.1| GTP-binding proten HflX [Clostridium saccharolyticum WM1]
gi|347602420|sp|D9R4W7.1|HFLX_CLOSW RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|302197503|gb|ADL05074.1| GTP-binding proten HflX [Clostridium saccharolyticum WM1]
Length = 423
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 169/319 (52%), Gaps = 17/319 (5%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G VD I + ++ GKG +E +K ++ + T + V D L Q + L+
Sbjct: 42 GAVAVDKVIQNRERIHPGTYLGKGKIEEIKDRI-WELDATGI-VCDDELSPAQLRNLEGA 99
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNI 234
V DR M+++ IF + A TRE ++Q+ +A+L Y R R
Sbjct: 100 LDTKVMDRTMVILDIFASRAVTREGKIQVELAQLRYRSARLVGLRSSLSRLGGGIGTRGP 159
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ L+ R ++ +R LK L +K RE++R ++ + P A+VGYTN GK+TL+
Sbjct: 160 GEKKLEMDRRLIHDRIGMLKAELEDVKRHREVVRQQRDKNHVPAAAIVGYTNAGKSTLLN 219
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LTD ++ ++LFATLD TT LP +IL DT+GFI +P L+E FK TLE+A
Sbjct: 220 RLTDA-GILAEDKLFATLDPTTRNLSLPGGQQILLTDTVGFIRKLPHHLIEAFKSTLEEA 278
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG---ERV 411
+DII+HVVD SNP Q V ETL+ L + +KI+ + V NK+DA G V
Sbjct: 279 KYSDIILHVVDCSNPQMDMQMYVVYETLRELGICDKIM---ITVFNKIDAADAGVILRDV 335
Query: 412 TEEYDLLISATRGTGLAQL 430
+ ++ + ISA G GL +L
Sbjct: 336 SSDHQVRISAKTGEGLDEL 354
>gi|163839487|ref|YP_001623892.1| GTP-binding protein [Renibacterium salmoninarum ATCC 33209]
gi|162952963|gb|ABY22478.1| GTP-binding protein [Renibacterium salmoninarum ATCC 33209]
Length = 526
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 179/346 (51%), Gaps = 32/346 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D + D +F G G LK V T V VD L
Sbjct: 130 AALAETAGSEVLDGLVQRRSKPDPGTFLGSGKALALKDVVSATGADTVV---VDAELAPS 186
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 187 QRRSLEDIVKVKVIDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQA 246
Query: 235 ------------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
TK LD +R + R KL++ + +K RE R ++R +
Sbjct: 247 GGQVGGAGAGMGSRGPGETKIELDRRR--IRTRMAKLRREIAAMKPAREAKRANRRRSEV 304
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P+ A+ GYTN GK++++ LT LV +N LFATLD T + P+ + DT+GF+
Sbjct: 305 PSAAIAGYTNAGKSSILNRLTHAGVLV-QNALFATLDPTVRKAATPDGIGFTLADTVGFV 363
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++PT L+E F+ TLE+ AD+I+HVVDVS+PD Q V E L ++ KI E +
Sbjct: 364 RSLPTQLVEAFRSTLEEVADADLILHVVDVSHPDPEGQIAAVREVLSEVDA-RKIPE--I 420
Query: 397 VVGNKVDAVPPG--ERVT--EEYDLLISATRGTGLAQLKEKVQDMI 438
+V NK DA P +R+T E +L+SA G G+ +L E + I
Sbjct: 421 IVLNKADAADPLVIQRLTQRETRSVLVSARTGQGIDELLELISQAI 466
>gi|254451323|ref|ZP_05064760.1| GTP-binding proten HflX [Octadecabacter arcticus 238]
gi|198265729|gb|EDY89999.1| GTP-binding proten HflX [Octadecabacter arcticus 238]
Length = 449
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/431 (31%), Positives = 223/431 (51%), Gaps = 34/431 (7%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ +V+ P IK K +RN L E AL ++ V S ++SL FGKG
Sbjct: 9 RAYVLHPEIKSDNK-RRNAKS--ALEEGVALAHALPELEVAGSQVVSLPKMHPGMLFGKG 65
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
++ +K + DA+ V + V + QQ+ L+ + V + DR ++++IF A+TRE
Sbjct: 66 KIQEIKGWLE-DAKAGLVLIDGHVSPV-QQRNLEKEWGVKLLDRTGLILEIFSDRARTRE 123
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKK 255
LQ+ +A L Y R R + T++ +G +++ R + + LKK
Sbjct: 124 GVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQVEADRRAIDLQLNNLKK 181
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L+K+ RE+ R + + +P VA+VGYTN GK+TL L+ D + + LFATLD T
Sbjct: 182 QLSKVVKTRELHRKARAKVPYPIVALVGYTNAGKSTLFNRLSGAD-VFAHDMLFATLDPT 240
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
+ LPN ++ DT+GFIS++PT L+ F+ TLE+ + ADII+HV D+S+P +QK
Sbjct: 241 MRKVELPNGDEVIMSDTVGFISDLPTQLVASFRATLEEVLEADIILHVRDISHPQSAEQK 300
Query: 376 QHVDETLQHLELEEKILEHVLVVGNKVDAVPPG-----ERVTEEYDLL--ISATRGTGLA 428
+ V +TL+ L++ + ++ V NK+D + P + + ++ D + ISA G GL
Sbjct: 301 KAVLDTLRQLDVNPDV--PMIEVLNKIDLLEPEDAGYLQALHKDNDKVFGISAVTGEGLD 358
Query: 429 QLKEKVQDMILKATGRKNITMRVR-SGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMT 487
+L V D ++ T + +T+ + + G+ WL + + + DT LDV T
Sbjct: 359 RLLNDVTDHLIVQT--RTLTLDLDWAMGAAQSWLRAEGVIESEAQTDTG---WTLDVRWT 413
Query: 488 DVIMNKFKHEF 498
F+ +F
Sbjct: 414 TRQQAHFEKQF 424
>gi|421849533|ref|ZP_16282512.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus NBRC 101655]
gi|421852885|ref|ZP_16285568.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371459720|dbj|GAB27715.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus NBRC 101655]
gi|371478884|dbj|GAB30771.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 439
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 195/380 (51%), Gaps = 26/380 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E+ L +SI G +V ++ L S + GKG ++ L+ + A V V
Sbjct: 38 LEEAVGLTASI-GLVIVRKDVLLLRSRRSATLLGKGQVDSLR--IAVKADQVDVVVVDAK 94
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT-- 221
L QQ+ L+ V DR +++ IF A A T+E LQ+ +A L Y LWT
Sbjct: 95 LSPAQQRNLETECGCKVIDRTGLILDIFGARAATKEGTLQVELAHLEYQRSRLVRLWTHL 154
Query: 222 -RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
R R +RM+ +R +LKK L +++ R + R ++R FP VA
Sbjct: 155 ERQRGGFGFLGGPGETQIEADRRMI-GDRIVRLKKDLEQVRRTRGLHRQARKRVPFPVVA 213
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+VGYTN GK+TL ALT ++ ++QLFATLD T LP+ R++ DT+GFIS++P
Sbjct: 214 LVGYTNAGKSTLFNALTGA-TVYAQDQLFATLDPTMRAIDLPSGRRVILSDTVGFISDLP 272
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLE----LEEKILEHVL 396
T L+ F+ TLE+ ADII+HV DV++PD QK+ V L+ + LE+ E ++
Sbjct: 273 TELIAAFRATLEEVAEADIILHVRDVAHPDSASQKKDVLGVLEGMAKDDMLEQDWPERII 332
Query: 397 VVGNKVDAVPPGERVTEEYD-LLISATRGTGLAQLKEKVQDMILKA--TGRKNITMRVRS 453
V NKVD + E + + D + ISA G GL L ++ I + T R + + +
Sbjct: 333 EVLNKVDLLGGPEAIPQTEDTIAISAITGEGLETLLARIDARITQGMETVRYCLPL---A 389
Query: 454 GGSEYQWLMKHTAVSNIRED 473
G+ WL +H V RED
Sbjct: 390 DGAASAWLYQHGEVVA-RED 408
>gi|373851383|ref|ZP_09594183.1| GTP-binding proten HflX [Opitutaceae bacterium TAV5]
gi|372473612|gb|EHP33622.1| GTP-binding proten HflX [Opitutaceae bacterium TAV5]
Length = 435
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 186/351 (52%), Gaps = 25/351 (7%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLE-LLKRQVRGDARVTAVFV 166
D +L E LV ++ VV+ +++L + + + G G E L+ R D + V
Sbjct: 35 DELLNELHELVENLH-IGVVERALVNLRAPNPGTLLGSGKTEELIARAKELDC---DLIV 90
Query: 167 SVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------L 219
D L QQ+ + L ++ V DR +++ IF A+TREA LQ+A+A + Y
Sbjct: 91 IDDHLSPAQQRNWEKLSEIAVIDREEVILDIFADRAQTREAVLQVALARMEYSLPRLTRA 150
Query: 220 WT---RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
WT R R T+ L+ R ++ +R +LKK L +++ QR + R+K+QR
Sbjct: 151 WTHLSRQRGKGKMGGEGETQ--LEQDRRLVRDRITRLKKELGEVRKQRGVQRHKRQRVPV 208
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
PT A+VGYTN GK++LI LT S++ ++LFATLD TT + +L ++L DT+GFI
Sbjct: 209 PTAAIVGYTNAGKSSLINTLTGS-SVLAEDKLFATLDPTTRQLVLRGNQKLLVTDTVGFI 267
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
+P L+E FK TLE+A++AD +IHV+DV+ P+ L L +EK +L
Sbjct: 268 RRLPHGLVEAFKATLEEALVADFLIHVLDVTAPNVAAHHATTLAVLGELGADEK---RIL 324
Query: 397 VVGNKVDAV-PPGERVTEEYD---LLISATRGTGLAQLKEKVQDMILKATG 443
V NKVDA P + D + +SA G G+ L + D+I A G
Sbjct: 325 TVFNKVDAADEPHLARARQLDRDGIFLSARTGDGVPALVDHCLDLIAGAFG 375
>gi|166032804|ref|ZP_02235633.1| hypothetical protein DORFOR_02519 [Dorea formicigenerans ATCC
27755]
gi|166027161|gb|EDR45918.1| GTP-binding protein HflX [Dorea formicigenerans ATCC 27755]
Length = 415
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 164/306 (53%), Gaps = 11/306 (3%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG ++ +K + + T + D L Q LQD V DR ++++ IF A
Sbjct: 57 TYVGKGKIDEIK-SLLWELDATGIICD-DELSPAQMNNLQDELDAKVMDRTLVILDIFAA 114
Query: 201 HAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQK 252
A T E ++Q+ +A+L Y TR R + L+ R ++ R
Sbjct: 115 RASTSEGKIQVELAQLKYRQTRLAGFGTAMSRLGGGIGTRGPGEKKLEMDRRLIKNRIAL 174
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
L + L +K RE+ R K+ + + P A+VGYTN GK+TL+ ALT D L ++LFATL
Sbjct: 175 LNRELKSVKQHREVTREKRAKSRIPVAAIVGYTNAGKSTLLNALTGADILA-EDKLFATL 233
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT LP+ IL DT+GFI +P L++ FK TLE+A AD+I+HVVDVSNP
Sbjct: 234 DPTTRSLKLPSGQEILLTDTVGFIRKLPHHLIDAFKSTLEEAKYADMILHVVDVSNPQAD 293
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKE 432
+Q V ETLQ L++++K + V ++++ +P +Y + ISA GL L E
Sbjct: 294 EQMFTVYETLQGLKVQDKPIITVFNKQDRLEGIPVIRDFKADYAVSISAKTKAGLGDLLE 353
Query: 433 KVQDMI 438
++ ++
Sbjct: 354 TIEALL 359
>gi|240143896|ref|ZP_04742497.1| GTP-binding protein HflX [Roseburia intestinalis L1-82]
gi|257204088|gb|EEV02373.1| GTP-binding protein HflX [Roseburia intestinalis L1-82]
Length = 414
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/279 (37%), Positives = 156/279 (55%), Gaps = 15/279 (5%)
Query: 165 FVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY- 223
V D L Q K L+ + V DR +I++ IF A A T E ++Q+ +A+L Y +R
Sbjct: 82 IVCDDELSPAQLKNLEQMLDTKVMDRTLIILDIFAARATTSEGKIQVELAQLKYRLSRLT 141
Query: 224 -------RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
R + L+ R ++ +R +L + L +++ RE+ R ++++++
Sbjct: 142 GLGRSMSRLGGGIGTRGPGEKKLEMDRRLIKDRIAQLNRELKEVRKHREITRAQREKKQI 201
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P A+VGYTN GK+TL+ LT ++ ++LFATLD TT LP R IL DT+GFI
Sbjct: 202 PVAAIVGYTNAGKSTLLNHLTGA-GVLEEDKLFATLDPTTRVLELPGRQEILLTDTVGFI 260
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
+P L+E FK TLE+A AD I+HVVD SNP +Q V +TL L++ EK V+
Sbjct: 261 RKLPHHLIEAFKSTLEEAKYADYIVHVVDASNPQRDKQMHIVYDTLYQLDIREKT---VI 317
Query: 397 VVGNKVDAVPPGERVTE---EYDLLISATRGTGLAQLKE 432
+ NK D V E + + +Y L +SA +GTGL +LKE
Sbjct: 318 TLFNKQDQVTDEEPIRDFKADYTLAVSAKKGTGLEELKE 356
>gi|423349897|ref|ZP_17327552.1| GTP-binding protein HflX [Scardovia wiggsiae F0424]
gi|393702389|gb|EJD64595.1| GTP-binding protein HflX [Scardovia wiggsiae F0424]
Length = 542
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 158/306 (51%), Gaps = 21/306 (6%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G +V++ + D ++ GKG + V T + V D L Q
Sbjct: 121 AALARTAGAQVMEGVLQHRFKPDPATYVGKGKANEIAAIVAATDSDT-IIVDAD-LPPSQ 178
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI- 234
++ L+D+ +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 179 RRALEDVAKVKVVDRTAVILDIFAQHATSREGKAQVELAQLEYMLPRLRGWGAALSRQAG 238
Query: 235 -----TKGFLDSK----------RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
G + S+ R V+ R +L++ + ++ R++ R ++R PTV
Sbjct: 239 GQSAGANGGIGSRGPGETQIELDRRVIRTRMARLRRQIARMAPARDIKRGSRRRNSLPTV 298
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GK++LI LT LV N LFATLD N R +YVDT+GF+ +
Sbjct: 299 AVVGYTNAGKSSLINRLTRSHELV-ENALFATLDTAVRHSEAANGRRFMYVDTVGFVRQL 357
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E FK TLE+A A +IIHVVD S+P+ Q V++ LQ + E L+V
Sbjct: 358 PTQLIEAFKSTLEEAAGASVIIHVVDASHPNPFSQIDAVNDVLQDIPGIEGT--PALIVF 415
Query: 400 NKVDAV 405
NK+D +
Sbjct: 416 NKIDCI 421
>gi|365897580|ref|ZP_09435576.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. STM 3843]
gi|365421672|emb|CCE08118.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. STM 3843]
Length = 461
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 224/452 (49%), Gaps = 46/452 (10%)
Query: 83 GTDH----------QVFVVQPFIK---WGKKMKRNTTRDF--MLAESKALVSSIQGWRVV 127
G DH +V V+ P+++ + + RDF L E+ L +I V
Sbjct: 9 GADHPKSADVQNTGRVIVIGPYLRARHGAVQPGASDARDFEARLDEATGLARAID-LTVA 67
Query: 128 DSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAV-FVSVDV-LKLHQQKMLQDLFQV 185
++ I ++ ++ GKG ++ + + G + V +D L QQ+ L+ +
Sbjct: 68 EALIATIGQIRPATYLGKGKVDEIAGLIAGQLPGHGIELVVMDCALSPIQQRNLEKAWNT 127
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
V DR ++++IF AKT+E LQ+ +A L Y R R + T++ +G
Sbjct: 128 KVLDRTGLILEIFGRRAKTKEGSLQVELAHLNY--QRSRLVRSWTHLERQRGGFGFMGGP 185
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+++ R ++ ER +L+ L K++ R + R +QR + VA+VGYTN GK+TL
Sbjct: 186 GETQIEADRRLISERISRLENELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFN 245
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT D + + LFATLD T LP+ + + DT+GFISN+PT L+ F+ TLE+
Sbjct: 246 RLTRAD-VQAADMLFATLDPTLRAISLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEV 304
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP-------- 406
+ AD+I+HV D+S+ D Q+Q V+ L L ++ + ++++ V NKVD +
Sbjct: 305 LEADVILHVRDISHEDAEAQQQDVEMVLSQLGIDPEASDNIIEVWNKVDCLDDAHRENLE 364
Query: 407 --PGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG-GSEYQWLMK 463
R E LL+SA G G+ L + ++D + A R + + + + G+ WL +
Sbjct: 365 NIAARRPPERPCLLVSAATGEGVDTLLQAIEDRL--AAARTTLDLSIDAADGAGISWLHR 422
Query: 464 HTAVSNIREDDTSAEHLL-LDVVMTDVIMNKF 494
+ V N D E + +D D++++++
Sbjct: 423 NAEVLNKELHDGRYEMTVRVDPSKRDIVVDRY 454
>gi|291539580|emb|CBL12691.1| GTP-binding protein HflX [Roseburia intestinalis XB6B4]
Length = 414
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/279 (37%), Positives = 156/279 (55%), Gaps = 15/279 (5%)
Query: 165 FVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY- 223
V D L Q K L+ + V DR +I++ IF A A T E ++Q+ +A+L Y +R
Sbjct: 82 IVCDDELSPTQLKNLEQMLDTKVMDRTLIILDIFAARATTSEGKIQVELAQLKYRLSRLT 141
Query: 224 -------RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
R + L+ R ++ +R +L + L +++ RE+ R ++++++
Sbjct: 142 GLGRSMSRLGGGIGTRGPGEKKLEMDRRLIKDRIAQLNRELKEVRKHREITRAQREKKQI 201
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P A+VGYTN GK+TL+ LT ++ ++LFATLD TT LP R IL DT+GFI
Sbjct: 202 PVAAIVGYTNAGKSTLLNHLTGA-GVLEEDKLFATLDPTTRVLELPGRQEILLTDTVGFI 260
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
+P L+E FK TLE+A AD I+HVVD SNP +Q V +TL L++ EK V+
Sbjct: 261 RKLPHHLIEAFKSTLEEAKYADYIVHVVDASNPQRDKQMHIVYDTLYQLDIREKT---VI 317
Query: 397 VVGNKVDAVPPGERVTE---EYDLLISATRGTGLAQLKE 432
+ NK D V E + + +Y L +SA +GTGL +LKE
Sbjct: 318 TLFNKQDQVTDEEPIRDFKADYTLAVSAKKGTGLEELKE 356
>gi|225163906|ref|ZP_03726198.1| GTP-binding protein HflX [Diplosphaera colitermitum TAV2]
gi|224801483|gb|EEG19787.1| GTP-binding protein HflX [Diplosphaera colitermitum TAV2]
Length = 428
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/364 (32%), Positives = 190/364 (52%), Gaps = 26/364 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VVD +++L S + G G E L Q + A + V D L QQ+ + L ++
Sbjct: 52 VVDRVLVNLRSPTPGTLLGSGKTEELIAQAK--ALECDLIVIDDHLSPAQQRNWEKLSEI 109
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT---RYRTIEDATNMNIT 235
V DR +++ IF A+TREA LQ+A+A + Y WT R R T
Sbjct: 110 AVIDREEVILDIFADRAQTREAVLQVALARMEYSLPRLTRAWTHLSRQRGKGKMGGEGET 169
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ R ++ +R +LKK L +++ QR + R+K+QR PT A+VGYTN GK++L+
Sbjct: 170 Q--LEQDRRLVRDRITRLKKELIEVRKQRTVQRHKRQRVPVPTAAIVGYTNAGKSSLLNT 227
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT +++ ++LFATLD TT + +L ++L DT+GFI +P L+E FK TLE+A+
Sbjct: 228 LTGA-AVLAEDKLFATLDPTTRQLLLRGNQKLLVTDTVGFIRRLPHGLVEAFKATLEEAI 286
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE----RV 411
+AD +IHV+DV+ P+ L+ L +EK +L V NK DA R
Sbjct: 287 VADFLIHVLDVTAPNVAAHHATTLSVLKELGADEK---RILTVFNKTDAADEPHLARARQ 343
Query: 412 TEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIR 471
+ + +SA G GL L + ++I A G + + S + + + A+ +I+
Sbjct: 344 LDRNGIFVSARTGDGLPALVDHCLELIADAFGSTKLFI----PHSRHDVIARLHAIGHIQ 399
Query: 472 EDDT 475
+DT
Sbjct: 400 FEDT 403
>gi|427431603|ref|ZP_18920946.1| GTP-binding protein HflX [Caenispirillum salinarum AK4]
gi|425877751|gb|EKV26482.1| GTP-binding protein HflX [Caenispirillum salinarum AK4]
Length = 433
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 220/427 (51%), Gaps = 51/427 (11%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFM--LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFG 144
+ VV P IK ++ + RD L E+K L +I +V +++L +F G
Sbjct: 13 RCLVVHPAIK--QRGTNDDARDPTERLEEAKGLALAID-LNIVHGEVVTLNKPRPATFLG 69
Query: 145 KGNLELLKRQVRGDARVTAVFVSVDVLKLH----QQKMLQDLFQVPVFDRYMIVIQIFKA 200
+G +E L+ + + V V V+ H QQ+ L+ ++ V DR ++++IF
Sbjct: 70 EGQVERLQSIIEDNE------VEVVVMDCHLSPVQQRNLERNWKTKVIDRTGLILEIFGE 123
Query: 201 HAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMER 249
A+TRE +LQ+ +A L Y R R + T++ +G ++ R ++ ER
Sbjct: 124 RARTREGQLQVELAHLSY--QRSRLVRSWTHLERQRGGAGFMGGPGETQIEIDRRLISER 181
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
+LKK L ++K R + R ++R +P VA+VGYTN GK+TL LT + + ++QLF
Sbjct: 182 ITRLKKELEEVKRTRNLHREARRRVPYPIVALVGYTNAGKSTLFNRLTKSE-VYAQDQLF 240
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T +LP+ +++ DT+GF+S++P L+ F TLE+ + AD+I+HV D +P
Sbjct: 241 ATLDPTMRGLVLPSGKQVILSDTVGFVSDLPHELVAAFHATLEEVLEADVIVHVRDAHSP 300
Query: 370 DYLQQKQHVDETLQ-HLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLI--------- 419
D QK V+ L+ L L E++ +L NK+D + P E +D L+
Sbjct: 301 DTAAQKADVEHVLRVELNLGEEVDAGLLEAMNKIDLLAP-----EAHDELVQQAARDDNM 355
Query: 420 ---SATRGTGLAQLKEKVQDMILKATGRKNITMRVR-SGGSEYQWLMKHTAVSNIREDDT 475
SA G G+ +L V +++ ++ R+ I V S G+ WL + V + RED+
Sbjct: 356 IALSAITGEGVDRLLATVDEVLSRS--RETIETDVPLSDGATISWLYRKGDVVS-REDNE 412
Query: 476 SAEHLLL 482
H+++
Sbjct: 413 ETAHMIV 419
>gi|346306654|ref|ZP_08848808.1| GTP-binding protein HflX [Dorea formicigenerans 4_6_53AFAA]
gi|345908012|gb|EGX77680.1| GTP-binding protein HflX [Dorea formicigenerans 4_6_53AFAA]
Length = 415
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 164/306 (53%), Gaps = 11/306 (3%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG ++ +K + + T + D L Q K LQD V DR ++++ IF A
Sbjct: 57 TYVGKGKIDEIK-SLLWELDATGIICD-DELSPAQMKNLQDELDAKVMDRTLVILDIFAA 114
Query: 201 HAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQK 252
A T E ++Q+ +A+L Y TR R + L+ R ++ R
Sbjct: 115 RASTSEGKIQVELAQLKYRQTRLAGFGTAMSRLGGGIGTRGPGEKKLEMDRRLIKNRIAL 174
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
L + L +K RE+ R K+ + + P A+VGYTN GK+TL+ ALT D L ++LFATL
Sbjct: 175 LNRELKSVKQHREVTREKRAKSRIPVAAIVGYTNAGKSTLLNALTGADILA-EDKLFATL 233
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT LP+ IL DT+GFI +P L++ FK TLE+A AD+I+HVVD SNP
Sbjct: 234 DPTTRSLKLPSGQEILLTDTVGFIRKLPHHLIDAFKSTLEEAKYADMILHVVDASNPQAD 293
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKE 432
+Q V ETLQ L++++K + V ++++ +P +Y + ISA GL L E
Sbjct: 294 EQMFTVYETLQGLKVQDKPIITVFNKQDRLEGMPVIRDFKADYTVSISAKTKAGLGDLLE 353
Query: 433 KVQDMI 438
++ ++
Sbjct: 354 TIEALL 359
>gi|259416757|ref|ZP_05740677.1| GTP-binding protein HflX [Silicibacter sp. TrichCH4B]
gi|259348196|gb|EEW59973.1| GTP-binding protein HflX [Silicibacter sp. TrichCH4B]
Length = 423
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/414 (30%), Positives = 211/414 (50%), Gaps = 37/414 (8%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ +V+ P IK + + T L E AL +++ VV + ++ L FG G
Sbjct: 9 RAWVLHPDIKSDRDRRNAVT---ALEEGVALAAALPDLEVVGAKVVGLPKAHPGMLFGSG 65
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
+E LK + + V V + V + QQ+ L+ ++V + DR ++++IF A+TRE
Sbjct: 66 KIEELKTLFKAE-EVELVLIDGPVSPV-QQRNLEKAWKVKILDRTGLILEIFSDRARTRE 123
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKK 255
LQ+ +A L Y R R + T++ +G +++ R + E+ +L++
Sbjct: 124 GVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDEQLVRLRR 181
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L+K+ R + R + + +P VA+VGYTN GK+TL LT D ++ ++ LFATLD T
Sbjct: 182 QLDKVVKTRTLHRAARAKIPYPIVALVGYTNAGKSTLFNRLTGAD-VMAKDMLFATLDPT 240
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
LP+ ++ DT+GFIS++PT L+ F+ TLE+ + AD+I+HV D+S+ D Q
Sbjct: 241 MRRVELPDGPEVILSDTVGFISDLPTELVASFRATLEEVLAADVILHVRDISHSDTENQA 300
Query: 376 QHVDETLQHLELEEKILEHVLVVGNKVDAVPP---------GERVTEEYDLLISATRGTG 426
+ V++ L L ++E ++ V NK+D + ER E Y ISA G G
Sbjct: 301 EDVEQILNSLGVDED--RALIEVWNKIDQLSEEDADACRQRAERSEELY--AISAITGEG 356
Query: 427 LAQLKEKVQDMILKATG-RKNITMRVR-SGGSEYQWLMKHTAVSNIREDDTSAE 478
L +L + D+ LK G R + + + S G + WL K V + DT E
Sbjct: 357 LPEL---LNDIALKLQGVRHHEVLHLDFSQGKQRAWLFKQDVVQEEEQTDTGIE 407
>gi|407778947|ref|ZP_11126207.1| GTP-binding proten HflX [Nitratireductor pacificus pht-3B]
gi|407299231|gb|EKF18363.1| GTP-binding proten HflX [Nitratireductor pacificus pht-3B]
Length = 458
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 206/392 (52%), Gaps = 37/392 (9%)
Query: 75 DEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKA-----LVSSIQGWRVVDS 129
D GA+ T + FVV P + ++ + T E+++ L +I +VV +
Sbjct: 15 DSGTRGAVAT--RAFVVSPVLAADRRAAESGTTPARSPEARSEEAVGLAEAID-LQVVSA 71
Query: 130 TIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFD 189
II + + + G G L+ L +V +A + V + + + QQ+ L+ V D
Sbjct: 72 EIIPVGTPRPATLIGTGKLDDLAARV-AEAEIEVVIIDHPLTPV-QQRNLEKALNAKVLD 129
Query: 190 RYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------- 238
R ++++IF A+T+E RLQ+ +A L Y R R + T++ +G
Sbjct: 130 RTGLILEIFGRRARTKEGRLQVELAHLEY--QRGRLVRSWTHLERQRGGGGFMGGPGETQ 187
Query: 239 LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTD 298
+++ R +L +R +LK+ L ++ R++ R+K+++ FP VA+VGYTN GK+TL LT
Sbjct: 188 IEADRRLLQDRIVRLKRELETVRRTRDLHRSKRRKVPFPIVAIVGYTNAGKSTLFNRLTG 247
Query: 299 DDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLAD 358
+++ + LFATLD T LP+ I+ DT+GFIS++PT L+ F+ TLE+ + AD
Sbjct: 248 A-AVMAEDMLFATLDPTLRRVQLPHGTTIILSDTVGFISDLPTHLVAAFRATLEEVIEAD 306
Query: 359 IIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD--------AVPPGER 410
++IH+ D+S+P Q V+E L L ++ +HVL V NK+D A+ G R
Sbjct: 307 LVIHLRDISDPASSAQAADVEEILGDLGVDVADKKHVLEVWNKIDNLDAEKRRALLDGTR 366
Query: 411 VTEEYDLLISATRGTG----LAQLKEKVQDMI 438
E L +SA G G LAQ++ ++ ++
Sbjct: 367 -GAEAPLAVSAVTGEGIDALLAQVEARISGVV 397
>gi|291562499|emb|CBL41315.1| GTP-binding protein HflX [butyrate-producing bacterium SS3/4]
Length = 417
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 174/319 (54%), Gaps = 17/319 (5%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V + I + + ++ GKG ++ LK V ++ T V V D L Q K L+D
Sbjct: 42 GAETVGAVIQNRENIHPGTYLGKGKIQELKEMV-WESGATGV-VCDDELSPAQLKNLEDA 99
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--------MNI 234
V DR MI++ IF A AKTRE ++Q+ +A+L Y R + ++ +
Sbjct: 100 LDTKVMDRTMIILDIFAARAKTREGKIQVELAQLRYRAVRLVGLRNSLSRLGGGIGTRGP 159
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ L+ R + ER +LK L ++ R+++R ++++ T A+VGYTN GK+TL+
Sbjct: 160 GETKLEVDRRRIHERISQLKSELQDVERHRDVVRKQREQSGTLTAAIVGYTNAGKSTLLN 219
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT ++ ++LFATLD TT LP ++L DT+GFI +P L+E FK TLE+A
Sbjct: 220 KLTGA-GILAEDKLFATLDPTTRALTLPGGEKVLLTDTVGFIRKLPHHLVEAFKSTLEEA 278
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV---DAVPPGERV 411
D+I+HVVD SNP Q V ETL+ L++++K ++ V NKV DA +
Sbjct: 279 RYCDVILHVVDCSNPQMDMQMHVVYETLRRLDIKDK---EIITVFNKVDRPDADTACRDM 335
Query: 412 TEEYDLLISATRGTGLAQL 430
+ +Y + +SA G G+ +L
Sbjct: 336 SADYKVKLSAKTGEGIEEL 354
>gi|311063949|ref|YP_003970674.1| GTP-binding protein HflX [Bifidobacterium bifidum PRL2010]
gi|313139783|ref|ZP_07801976.1| GTPase [Bifidobacterium bifidum NCIMB 41171]
gi|310866268|gb|ADP35637.1| HflX GTP-binding protein [Bifidobacterium bifidum PRL2010]
gi|313132293|gb|EFR49910.1| GTPase [Bifidobacterium bifidum NCIMB 41171]
Length = 500
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 171/348 (49%), Gaps = 35/348 (10%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAV-----FVSVDV 170
A ++ G V D + D ++ G G L A + AV V D
Sbjct: 88 AALAETAGAVVCDGLLQHRYKPDSATYVGSGKAREL-------ADIVAVNEADTIVVDDD 140
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYR------ 224
L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R
Sbjct: 141 LPPSQRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQLEYMLPRLRGWGGSL 200
Query: 225 ------TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQ 274
A ++G ++K R V+ R +L++ + ++ RE+ R ++R
Sbjct: 201 SRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRSRIARLRRQIAQMAPAREVKRGSRRRY 260
Query: 275 KFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIG 334
PT+AVVGYTN GK++L LT LV N LFATLD + YVDT+G
Sbjct: 261 GLPTIAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRARAKDGRLYAYVDTVG 319
Query: 335 FISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEH 394
F+ N+PT L+E FK TLE+ ADII+HVVD S+PD Q V++ L +E E+I
Sbjct: 320 FVRNLPTQLIEAFKSTLEEVAEADIILHVVDGSHPDPFSQIDAVNDVLADIEGAEEIPR- 378
Query: 395 VLVVGNKVDAVPPGER----VTEEYDLLISATRGTGLAQLKEKVQDMI 438
+VV NK+D + R E L+SA G GL L +++ M+
Sbjct: 379 -VVVFNKIDRIDAATRERLAALEPEASLVSAATGEGLDDLLRRIESML 425
>gi|310287084|ref|YP_003938342.1| GTP-binding protein [Bifidobacterium bifidum S17]
gi|421735042|ref|ZP_16174073.1| GTP-binding protein [Bifidobacterium bifidum LMG 13195]
gi|309251020|gb|ADO52768.1| GTP-binding protein [Bifidobacterium bifidum S17]
gi|407077033|gb|EKE49908.1| GTP-binding protein [Bifidobacterium bifidum LMG 13195]
Length = 521
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 171/348 (49%), Gaps = 35/348 (10%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAV-----FVSVDV 170
A ++ G V D + D ++ G G L A + AV V D
Sbjct: 109 AALAETAGAVVCDGLLQHRYKPDSATYVGSGKAREL-------ADIVAVNEADTIVVDDD 161
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYR------ 224
L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R
Sbjct: 162 LPPSQRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQLEYMLPRLRGWGGSL 221
Query: 225 ------TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQ 274
A ++G ++K R V+ R +L++ + ++ RE+ R ++R
Sbjct: 222 SRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRSRIARLRRQIAQMAPAREVKRGSRRRY 281
Query: 275 KFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIG 334
PT+AVVGYTN GK++L LT LV N LFATLD + YVDT+G
Sbjct: 282 GLPTIAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRARAKDGRLYAYVDTVG 340
Query: 335 FISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEH 394
F+ N+PT L+E FK TLE+ ADII+HVVD S+PD Q V++ L +E E+I
Sbjct: 341 FVRNLPTQLIEAFKSTLEEVAEADIILHVVDGSHPDPFSQIDAVNDVLADIEGAEEIPR- 399
Query: 395 VLVVGNKVDAVPPGER----VTEEYDLLISATRGTGLAQLKEKVQDMI 438
+VV NK+D + R E L+SA G GL L +++ M+
Sbjct: 400 -VVVFNKIDRIDAATRERLAALEPEASLVSAATGEGLDDLLRRIESML 446
>gi|391230743|ref|ZP_10266949.1| GTP-binding protein HflX [Opitutaceae bacterium TAV1]
gi|391220404|gb|EIP98824.1| GTP-binding protein HflX [Opitutaceae bacterium TAV1]
Length = 435
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 185/351 (52%), Gaps = 25/351 (7%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLE-LLKRQVRGDARVTAVFV 166
D +L E LV ++ VV+ +++L + + + G G E L+ R D + V
Sbjct: 35 DELLNELHELVENLH-IGVVERALVNLRAPNPGTLLGSGKTEELIARAKELDC---DLIV 90
Query: 167 SVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------L 219
D L QQ+ + L + V DR +++ IF A+TREA LQ+A+A + Y
Sbjct: 91 IDDHLSPAQQRNWEKLSGIAVIDREEVILDIFADRAQTREAVLQVALARMEYSLPRLTRA 150
Query: 220 WT---RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
WT R R T+ L+ R ++ +R +LKK L +++ QR + R+K+QR
Sbjct: 151 WTHLSRQRGKGKMGGEGETQ--LEQDRRLVRDRITRLKKELGEVRKQRGVQRHKRQRVPV 208
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
PT A+VGYTN GK++LI LT S++ ++LFATLD TT + +L ++L DT+GFI
Sbjct: 209 PTAAIVGYTNAGKSSLINTLTGS-SVLAEDKLFATLDPTTRQLVLRGNQKLLVTDTVGFI 267
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
+P L+E FK TLE+A++AD +IHV+DV+ P+ L L +EK +L
Sbjct: 268 RRLPHGLVEAFKATLEEALVADFLIHVLDVTAPNVAAHHATTLAVLGELGADEK---RIL 324
Query: 397 VVGNKVDAV-PPGERVTEEYD---LLISATRGTGLAQLKEKVQDMILKATG 443
V NKVDA P + D + +SA G G+ L + D+I A G
Sbjct: 325 TVFNKVDAADEPHLARARQLDRDGIFLSARTGDGVPALVDHCLDLIAGAFG 375
>gi|291535016|emb|CBL08128.1| GTP-binding protein HflX [Roseburia intestinalis M50/1]
Length = 414
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 156/279 (55%), Gaps = 15/279 (5%)
Query: 165 FVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY- 223
V D L Q K L+ + V DR +I++ IF A A T E ++Q+ +A+L Y +R
Sbjct: 82 IVCDDELSPAQLKNLEQMLDTKVMDRTLIILDIFAARATTSEGKIQVELAQLKYRLSRLT 141
Query: 224 -------RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
R + L+ R ++ +R +L + L +++ RE+ R ++++++
Sbjct: 142 GLGRSMSRLGGGIGTRGPGEKKLEMDRRLIKDRIAQLNRELKEVRKHREITRAQREKKQI 201
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P A+VGYTN GK+TL+ LT ++ ++LFATLD TT LP R IL DT+GFI
Sbjct: 202 PVAAIVGYTNAGKSTLLNHLTGA-GVLEEDKLFATLDPTTRVLELPGRQEILLTDTVGFI 260
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
+P L+E FK TLE+A AD I+HVVD SNP +Q V +TL L++ EK ++
Sbjct: 261 RKLPHHLIEAFKSTLEEAKYADYILHVVDASNPQRDKQMHIVYDTLYQLDIREKT---II 317
Query: 397 VVGNKVDAVPPGERVTE---EYDLLISATRGTGLAQLKE 432
+ NK D V E + + +Y L +SA +GTGL +LKE
Sbjct: 318 TLFNKQDQVTDEEPIRDFKADYTLAVSAKKGTGLEELKE 356
>gi|119961109|ref|YP_947366.1| GTP-binding protein [Arthrobacter aurescens TC1]
gi|119947968|gb|ABM06879.1| putative GTP-binding protein [Arthrobacter aurescens TC1]
Length = 629
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 177/348 (50%), Gaps = 32/348 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D + D +F G G + LK V A A V VD L
Sbjct: 233 AALAETAGSEVLDGLVQRRQKPDPGTFLGSGKAQELKDIV---AATGADTVVVDTELAPS 289
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R D+ +
Sbjct: 290 QRRGLEDIVKVKVVDRTTLILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGDSMSRQA 349
Query: 235 ------------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
TK LD +R + R KL++ + +K RE R ++R
Sbjct: 350 GGQVGGAGAGMGSRGPGETKIELDRRR--IRTRMAKLRREIAAMKPARETKRANRRRNAV 407
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P+VA+ GYTN GK++L+ LTD LV N LFATLD T + P+ + DT+GF+
Sbjct: 408 PSVAIAGYTNAGKSSLLNRLTDAGVLV-ENALFATLDPTVRKAQTPDGIGYTLADTVGFV 466
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++PT L+E F+ TLE+ AD+I+HVVD S+PD Q V ++ K+ E +
Sbjct: 467 RSLPTQLIEAFRSTLEEVADADLILHVVDASHPDPEGQIAAVRAVFTEVDA-RKVPE--I 523
Query: 397 VVGNKVDAVPP--GERV--TEEYDLLISATRGTGLAQLKEKVQDMILK 440
+V NKVD P ER+ E ++S G G+A+L E + I +
Sbjct: 524 IVLNKVDVADPFVVERLKQKEPRHAVVSTRTGQGIAELLEDISRSIPR 571
>gi|258542822|ref|YP_003188255.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-01]
gi|384042743|ref|YP_005481487.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-12]
gi|384051260|ref|YP_005478323.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-03]
gi|384054368|ref|YP_005487462.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-07]
gi|384057602|ref|YP_005490269.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-22]
gi|384060243|ref|YP_005499371.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-26]
gi|384063535|ref|YP_005484177.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-32]
gi|384119545|ref|YP_005502169.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256633900|dbj|BAH99875.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-01]
gi|256636959|dbj|BAI02928.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-03]
gi|256640012|dbj|BAI05974.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-07]
gi|256643068|dbj|BAI09023.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-22]
gi|256646123|dbj|BAI12071.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-26]
gi|256649176|dbj|BAI15117.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-32]
gi|256652163|dbj|BAI18097.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655220|dbj|BAI21147.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-12]
Length = 448
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 130/380 (34%), Positives = 195/380 (51%), Gaps = 26/380 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E+ L +SI G +V ++ L S + GKG ++ L+ + A V V
Sbjct: 47 LEEAVGLTASI-GLVIVRKDVLLLRSRRSATLLGKGQVDSLR--IAVKADQVDVVVVDAK 103
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT-- 221
L QQ+ L+ V DR +++ IF A A T+E +Q+ +A L Y LWT
Sbjct: 104 LSPAQQRNLETECGCKVIDRTGLILDIFGARAATKEGTVQVELAHLEYQRSRLVRLWTHL 163
Query: 222 -RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
R R +RM+ +R +LKK L +++ R + R ++R FP VA
Sbjct: 164 ERQRGGFGFLGGPGETQIEADRRMI-GDRIVRLKKDLEQVRRTRGLHRQARKRVPFPVVA 222
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+VGYTN GK+TL ALT ++ ++QLFATLD T LP+ R++ DT+GFIS++P
Sbjct: 223 LVGYTNAGKSTLFNALTGA-TVYAQDQLFATLDPTMRAIDLPSGRRVILSDTVGFISDLP 281
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLE----LEEKILEHVL 396
T L+ F+ TLE+ ADII+HV DV++PD QK+ V L+ + LE+ E ++
Sbjct: 282 TELIAAFRATLEEVAEADIILHVRDVAHPDSASQKKDVLGVLEGMAKDDMLEQDWPERII 341
Query: 397 VVGNKVDAVPPGERVTEEYD-LLISATRGTGLAQLKEKVQDMILKA--TGRKNITMRVRS 453
V NKVD + E + + D + ISA G GL L ++ I + T R + + +
Sbjct: 342 EVLNKVDLLGGPEAIPQTEDTIAISAITGEGLETLLARIDARITQGMETVRYCLPL---A 398
Query: 454 GGSEYQWLMKHTAVSNIRED 473
G+ WL +H V RED
Sbjct: 399 DGAASAWLYQHGEVVA-RED 417
>gi|381169137|ref|ZP_09878311.1| putative GTP-binding protein (hflX) [Phaeospirillum molischianum
DSM 120]
gi|380681751|emb|CCG43133.1| putative GTP-binding protein (hflX) [Phaeospirillum molischianum
DSM 120]
Length = 451
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 217/412 (52%), Gaps = 32/412 (7%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
LAE+ L +I +V + + + + GKG +E L + DA +T + +
Sbjct: 49 LAEAIGLAQAID-LDIVLAEAVPVPRPRPATLLGKGAVERLADAI-ADAEITLAVIDSPL 106
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
+ QQ+ L+ + V DR ++++IF A A+TRE LQ+ +A L Y R R + T
Sbjct: 107 TPV-QQRNLEKAWGCKVIDRTGLILEIFGARARTREGTLQVELAALSY--QRSRLVRSWT 163
Query: 231 NMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +G +++ R ++ +R KL++ L+ +K R++ R ++R +P V
Sbjct: 164 HLERQRGGFGFLGGPGETQIEADRRMIGDRIVKLERELDDVKRTRDLHRKARRRVPYPIV 223
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL +T + + ++ LFATLD T LP+ +++ DT+GFIS++
Sbjct: 224 ALVGYTNAGKSTLFNTITRAEVMA-KDMLFATLDPTMRTLDLPSGRKVILSDTVGFISDL 282
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
P L+ F+ TLE+ + AD+++HV D+S+PD Q V+ L+ L LEE ++++ LV G
Sbjct: 283 PHELVAAFRATLEEVLEADVVVHVRDISHPDSEAQAADVEAVLRELGLEE-MVDNGLVEG 341
Query: 400 -NKVDAVPPGERVTEEYD--------LLISATRGTGLAQLKEKVQDMILKATGRKNITMR 450
NK+D + ER E ++ L SA G G+ L ++ + + ++++
Sbjct: 342 LNKIDLL-DAERREEVFNQAQRHSARLPFSAVTGEGVPALLAELDRRLGQGRAMIDVSLS 400
Query: 451 VRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSR 502
+ G S WL +H V R DD S +L + + DV +F+ S+R
Sbjct: 401 LTDGAS-IAWLYRHGEVVA-RRDDQSHAYLRVKLEAADV--RRFQQRQASAR 448
>gi|403526579|ref|YP_006661466.1| GTP-binding protein YnbA [Arthrobacter sp. Rue61a]
gi|403229006|gb|AFR28428.1| putative GTP-binding protein YnbA [Arthrobacter sp. Rue61a]
Length = 653
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 177/348 (50%), Gaps = 32/348 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D + D +F G G + LK V A A V VD L
Sbjct: 257 AALAETAGSEVLDGLVQRRQKPDPGTFLGSGKAQELKDIV---AATGADTVVVDTELAPS 313
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R D+ +
Sbjct: 314 QRRGLEDIVKVKVVDRTTLILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGDSMSRQA 373
Query: 235 ------------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
TK LD +R + R KL++ + +K RE R ++R
Sbjct: 374 GGQVGGAGAGMGSRGPGETKIELDRRR--IRTRMAKLRREIAAMKPARETKRANRRRNAV 431
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P+VA+ GYTN GK++L+ LTD LV N LFATLD T + P+ + DT+GF+
Sbjct: 432 PSVAIAGYTNAGKSSLLNRLTDAGVLV-ENALFATLDPTVRKAQTPDGIGYTLADTVGFV 490
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++PT L+E F+ TLE+ AD+I+HVVD S+PD Q V ++ K+ E +
Sbjct: 491 RSLPTQLIEAFRSTLEEVADADLILHVVDASHPDPEGQIAAVRAVFTEVDA-RKVPE--I 547
Query: 397 VVGNKVDAVPP--GERV--TEEYDLLISATRGTGLAQLKEKVQDMILK 440
+V NKVD P ER+ E ++S G G+A+L E + I +
Sbjct: 548 IVLNKVDVADPFVVERLKQKEPRHAVVSTRTGQGIAELLEDISRSIPR 595
>gi|294084362|ref|YP_003551120.1| GTPase [Candidatus Puniceispirillum marinum IMCC1322]
gi|292663935|gb|ADE39036.1| GTPase [Candidatus Puniceispirillum marinum IMCC1322]
Length = 430
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 135/442 (30%), Positives = 215/442 (48%), Gaps = 53/442 (11%)
Query: 86 HQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGK 145
+ FV+ P +K+ + D ML E+ LV +I G VV + +++ SF GK
Sbjct: 4 NNAFVIHPDVKYAPTSR---PADMMLEEACMLVEAI-GLDVVVAETVNISQPRAGSFLGK 59
Query: 146 GNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTR 205
G + L +A + + L QQ+ L+ L V DR ++++IF A A+T
Sbjct: 60 GYADQLAEM--AEAYDHPLIIINTTLSSVQQRNLETLTSCKVIDRTALILEIFGARAQTH 117
Query: 206 EARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLK 254
RLQ+ +A L + R R + T++ +G ++ R +LM+R ++K
Sbjct: 118 AGRLQVELAALTF--QRSRLVRSWTHLERQRGGGGFLGGPGERQIELDRRMLMDRVMRIK 175
Query: 255 KALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDV 314
L +++ R + R + R + PT+A++GYTN GK+TL LT D L ++ LFATLD
Sbjct: 176 GELREVERTRHLQRRNRDRSETPTLALIGYTNAGKSTLFNMLTGADVL-SKDMLFATLDP 234
Query: 315 TTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQ 374
T LP+ R + DT+GFIS +PT L+E FK TLE+ + ADI++HV D S+P ++
Sbjct: 235 TMRGMKLPSGRRAVLADTVGFISQLPTELVEAFKSTLEEVVEADILVHVHDASSPMVAEE 294
Query: 375 KQHVDETLQHLELE-----EKILEHVLVVGNKVDAVP---PGERVTEEY-------DLLI 419
V + L+ L L+ E+++ H+L +K+D + GE T EY + +
Sbjct: 295 YADVCQILEELGLDAEMQAERVI-HILNKSDKIDDMAGDMAGE--TREYLENLVGNGVFV 351
Query: 420 SATRGTGLAQLKEKVQDMILKATGRKNI------TMRVRSGGSEYQWLMKHTAVSNIRED 473
SA G G + D +L + NI M G+ WL H V N D
Sbjct: 352 SALTGAG-------IDDALLALDEKINIDDIRLDVMLAPEDGAPRAWLHAHGTVHNSLFD 404
Query: 474 DTSAEHLLLDVVMTDVIMNKFK 495
+ E + L M+ N+F+
Sbjct: 405 EAGNETVSL--TMSIANRNRFQ 424
>gi|393724841|ref|ZP_10344768.1| HSR1-like GTP-binding protein [Sphingomonas sp. PAMC 26605]
Length = 428
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/380 (32%), Positives = 193/380 (50%), Gaps = 29/380 (7%)
Query: 105 TTRDF--MLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR-GDARV 161
+TRD LAE+ L +I VVD I + + + GKG LE L VR G+A +
Sbjct: 28 STRDAEARLAETAGLAMAIH-VEVVDRVAIKVRTLQPSTLIGKGQLEALAATVRMGEAEL 86
Query: 162 TAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY--- 218
S L QQ+ L+ V DR ++++IF A T E RLQ+ +A L Y
Sbjct: 87 VVFDAS---LTPVQQRNLEKALSAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAG 143
Query: 219 ----LWT---RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKK 271
WT R R + +++ R ++ +R +LKK L ++ R + R+++
Sbjct: 144 RLVRSWTHLERQRGGF-GFLGGPGETQIEADRRLIRDRMARLKKELEQVSRTRGLHRDRR 202
Query: 272 QRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVD 331
QR +P +A+VGYTN GK+TL +T D ++ + LFATLD T + LP + + D
Sbjct: 203 QRAPWPVIALVGYTNAGKSTLFNRMTGAD-VMAEDLLFATLDPTLRQIALPGIDKAILSD 261
Query: 332 TIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKI 391
T+GF+S +PT L+ FK TLE+ + AD++IHV D+++PD L Q+ V+ L+ + ++ +
Sbjct: 262 TVGFVSELPTQLVAAFKATLEEVVSADLLIHVRDIAHPDTLVQRDDVETVLRDIGVDTSV 321
Query: 392 LEHVLVVGNKVDAVPP-------GERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGR 444
+ NK+D + GE + + ISA G G+A L + V + L A+ R
Sbjct: 322 PR--IEAWNKLDLLDDDERAEWLGEAARRDDVVAISALSGEGVAGLLDTVAGL-LTASHR 378
Query: 445 KNITMRVRSGGSEYQWLMKH 464
+ + G+ WL H
Sbjct: 379 RYTILLDAGDGAGAAWLHAH 398
>gi|393767216|ref|ZP_10355766.1| GTP-binding proten HflX [Methylobacterium sp. GXF4]
gi|392727313|gb|EIZ84628.1| GTP-binding proten HflX [Methylobacterium sp. GXF4]
Length = 473
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 225/475 (47%), Gaps = 51/475 (10%)
Query: 67 SDEFKTIRDEAQTGALGTDHQVFVVQPFIKWGK-------KMKRNTTR--DFMLAESKAL 117
S E + A G + V+ P++ G + TR + L E+ L
Sbjct: 7 SGEARLQAQAAPEGEIAAATHTLVIGPYLARGAHGPGVPGNGAAHPTRSVEARLDEATGL 66
Query: 118 VSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQK 177
++I+ VV+S ISL ++ GKG +E + +R AR + V L QQ+
Sbjct: 67 AAAIE-LDVVESLAISLPRIRPSTYLGKGRVEEIAGLIR--AREIGLVVMDCALSPVQQR 123
Query: 178 MLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKG 237
L+ + V DR ++++IF A TRE LQ+ A L Y + R + T++ +G
Sbjct: 124 NLEKEWGAKVIDRTGLILEIFGRRASTREGTLQVEHAHLAY--QKSRLVRSWTHLERQRG 181
Query: 238 F-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTN 286
+++ R ++ ER ++++ L+ + R + R + R +P VA+VGYTN
Sbjct: 182 GFGFLGGPGETQIEADRRMIQERMTRIERDLDAVVRTRGLHRQSRARVPYPIVALVGYTN 241
Query: 287 CGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEP 346
GK++L LT + + ++ LFATLD T LP+ ++ DT+GFIS++PT L+
Sbjct: 242 AGKSSLFNTLTRAE-VTAKDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTPLIAA 300
Query: 347 FKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP 406
F+ TLEDA+ AD+++HV DVS+ D Q + V E L+ L + E E ++ V NK D +
Sbjct: 301 FRATLEDAIEADVLLHVRDVSHVDSEAQAEDVGEVLRELGI-ETTAERIIEVWNKSDLLD 359
Query: 407 PGERVT---------------EEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
ER + +L+SA G GLA L +++ I GR + V
Sbjct: 360 DDERTRLMNLSGQSKARNDRDSDAPVLVSALTGEGLAALTARIEARI----GRHRASFAV 415
Query: 452 R---SGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSRK 503
G+ WL ++ + + R + HL + + +F + F ++R+
Sbjct: 416 SLPPEDGAALNWLYENAEILDRRAEADGTLHLAIRIAPEK--EPRFLNRFSAARR 468
>gi|160941960|ref|ZP_02089283.1| hypothetical protein CLOBOL_06852 [Clostridium bolteae ATCC
BAA-613]
gi|158435124|gb|EDP12891.1| hypothetical protein CLOBOL_06852 [Clostridium bolteae ATCC
BAA-613]
Length = 426
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 173/318 (54%), Gaps = 26/318 (8%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG ++ + R++ D R T V D L Q + L+D V DR M+++ IF +
Sbjct: 60 TYLGKGKIDEV-RELLWDTRATGVICD-DELSPAQLRNLEDALDTKVMDRTMVILDIFAS 117
Query: 201 HAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQK 252
A TRE ++Q+ +A+L Y R R + L++ R ++ +R +
Sbjct: 118 RASTREGKIQVELAQLKYRAVRLVGMRNSLSRLGGGIGTRGPGEKKLETDRRLIHQRIGQ 177
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
LK+ L +K RE+ R ++++ + A+VGYTN GK+TL+ LT ++ ++LFATL
Sbjct: 178 LKEELADVKRHREVTRQQREKNFALSAAIVGYTNAGKSTLLNRLTGA-GILAEDKLFATL 236
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT L + +IL DT+GFI +P L+E FK TLE+A +DI++HVVD SNP
Sbjct: 237 DPTTRSYTLEDGQQILLTDTVGFIRKLPHHLIEAFKSTLEEARYSDIVLHVVDCSNPQMD 296
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVD---AVPPGER---------VTEEYDLLIS 420
Q V ETL+ LE+ +K ++ V NKVD + GE + +Y + IS
Sbjct: 297 MQMHVVKETLEELEIVDKT---IVTVFNKVDRFRELEAGENSGVMQIPRDFSSDYQVRIS 353
Query: 421 ATRGTGLAQLKEKVQDMI 438
A G GL +L++ +Q +I
Sbjct: 354 ARTGEGLEELQKVLQAII 371
>gi|390936432|ref|YP_006393991.1| GTP-binding protein [Bifidobacterium bifidum BGN4]
gi|389890045|gb|AFL04112.1| GTP-binding protein [Bifidobacterium bifidum BGN4]
Length = 523
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 171/348 (49%), Gaps = 35/348 (10%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAV-----FVSVDV 170
A ++ G V D + D ++ G G L A + AV + D
Sbjct: 111 AALAETAGAVVCDGLLQHRYKPDSATYVGSGKAREL-------ADIVAVNEADTIIVDDD 163
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYR------ 224
L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R
Sbjct: 164 LPPSQRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQLEYMLPRLRGWGGSL 223
Query: 225 ------TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQ 274
A ++G ++K R V+ R +L++ + ++ RE+ R ++R
Sbjct: 224 SRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRSRIARLRRQIAQMAPAREVKRGSRRRY 283
Query: 275 KFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIG 334
PT+AVVGYTN GK++L LT LV N LFATLD + YVDT+G
Sbjct: 284 GLPTIAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRARAKDGRLYAYVDTVG 342
Query: 335 FISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEH 394
F+ N+PT L+E FK TLE+ ADII+HVVD S+PD Q V++ L +E E+I
Sbjct: 343 FVRNLPTQLIEAFKSTLEEVAEADIILHVVDGSHPDPFSQIDAVNDVLADIEGGEEIPR- 401
Query: 395 VLVVGNKVDAVPPGER----VTEEYDLLISATRGTGLAQLKEKVQDMI 438
+VV NK+D + R E L+SA G GL L +++ M+
Sbjct: 402 -VVVFNKIDRIDAATRERLAALEPEASLVSAATGEGLDDLLRRIESML 448
>gi|85715518|ref|ZP_01046499.1| GTP-binding protein, [Nitrobacter sp. Nb-311A]
gi|85697713|gb|EAQ35589.1| GTP-binding protein, [Nitrobacter sp. Nb-311A]
Length = 457
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 202/412 (49%), Gaps = 43/412 (10%)
Query: 87 QVFVVQPFIKW--------GKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFD 138
+ V+ P+++ G+ ++ R L E+ L +I VV + + +
Sbjct: 23 RAIVIGPYLRARGDAETRAGRSLRNTNAR---LDEASGLARAID-LHVVQAIVAPVSQIR 78
Query: 139 KKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQI 197
++ GKG +E LK + D A V +D L QQ+ L+ + V DR ++++I
Sbjct: 79 PATYLGKGKVEELKGLIAADG---ASLVVMDCTLSPVQQRNLEKAWGTKVLDRTGLILEI 135
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVL 246
F AKT+E LQ+ +A L Y R R + T++ +G +++ R ++
Sbjct: 136 FGRRAKTKEGALQVELAHLNY--QRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLI 193
Query: 247 MEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRN 306
+R +L+ L K++ R + R +QR + VA+VGYTN GK+TL LT D + +
Sbjct: 194 GDRIARLENELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRAD-VQAAD 252
Query: 307 QLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
LFATLD T LP+ + + DT+GFISN+PT L+ F+ TLE+ M ADII+HV D+
Sbjct: 253 MLFATLDPTLRSLALPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVMEADIILHVRDI 312
Query: 367 SNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP----------PGERVTEEYD 416
S+ D Q+ V+ L L +E +L V NK+D R T+
Sbjct: 313 SHEDTEPQQHDVEAVLHQLGIERGGAARILEVWNKIDRFDVDQRKELENIVARRSTDVPC 372
Query: 417 LLISATRGTGLAQLKEKVQDMILKATGRKNITMRV-RSGGSEYQWLMKHTAV 467
L+SA G G+ L ++D + A R + + V S G+ WL +++ V
Sbjct: 373 FLVSAETGEGVETLLAAIEDRL--AATRTTLDLSVDASNGAAISWLHRNSEV 422
>gi|260427894|ref|ZP_05781873.1| GTP-binding protein HflX [Citreicella sp. SE45]
gi|260422386|gb|EEX15637.1| GTP-binding protein HflX [Citreicella sp. SE45]
Length = 417
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 201/385 (52%), Gaps = 26/385 (6%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
+ L E+ AL ++ VV S ++ + FG G +E LK + +A V V V
Sbjct: 21 EMALEEAVALAVALPDLEVVGSAVVPVRDPHPGHLFGTGKIEELK-TLFEEAEVELVLVD 79
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIE 227
V + QQ+ L+ ++V + DR ++++IF A TRE LQ+ +A L Y R R +
Sbjct: 80 GPVSPV-QQRNLEKQWKVKLLDRTGLILEIFSDRAATREGVLQVEMAALSY--QRTRLVR 136
Query: 228 DATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
T++ +G +++ R + E+ +L++ L+++ R++ R + + F
Sbjct: 137 AWTHLERQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLDRVVKTRDLHRKARAKVPF 196
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P VA+VGYTN GK+TL LT + + ++ LFATLD T LP + ++ DT+GFI
Sbjct: 197 PIVALVGYTNAGKSTLFNRLTGAEVMA-KDMLFATLDPTMRAVRLPTGIEVILSDTVGFI 255
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
S++PT L+ F+ TLE+ + AD+++HV D+S+P+ +Q + V+ L L L+E++ +
Sbjct: 256 SDLPTELVAAFRATLEEVLAADVVVHVRDISHPNTEEQSEDVETILASLGLDEEVPR--I 313
Query: 397 VVGNKVDAVPPGERVT-------EEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITM 449
V NK+D + P ER EE +SA G GL + V D++ T + + +
Sbjct: 314 EVWNKIDRLHPDERDALLTRAEREEQVYAVSALTGDGLDVMLRAVTDLLQGETVEEELLL 373
Query: 450 RVRSGGSEYQWLMKHTAVSNIREDD 474
G WL V++ R+++
Sbjct: 374 GF-DEGRRRSWLFGKGLVTDERQEE 397
>gi|83814057|ref|YP_446511.1| GTPase [Salinibacter ruber DSM 13855]
gi|83755451|gb|ABC43564.1| GTPase of unknown function subfamily, putative [Salinibacter ruber
DSM 13855]
Length = 427
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 181/331 (54%), Gaps = 25/331 (7%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V D SL S +F G G ++ L R + R + + +S D L Q K ++
Sbjct: 16 GADVTDRLTQSLNSPSPATFIGSGKVKELARLTK--ERDSDLVISDDELSPVQVKNIEKK 73
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSK 242
+ DR +++ IF + A+TR A+ Q+ +A+L YL R R T+++ +G + +K
Sbjct: 74 IDCKLLDRTGLILDIFASRAQTRAAKTQVELAQLGYL--RSRLTRRWTHLSRQEGGIGTK 131
Query: 243 ----------RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTL 292
R ++ +R KL++ L+++ QR R K R+ + T ++VGYTN GK+TL
Sbjct: 132 GPGEKQIEMDRRIIDKRMAKLREKLDEIDRQRTTQR--KGREGYTTASLVGYTNAGKSTL 189
Query: 293 IKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLE 352
+ AL D+D L ++LFATLD TT L + +L DT+GFI +P L+E F+ TL+
Sbjct: 190 LNALADED-LEAEDRLFATLDATTRTVELDSNKEVLMSDTVGFIRKLPHRLIESFRSTLD 248
Query: 353 DAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT 412
+ +D++IHVVDV++P+Y +Q + V ETL LE +K LVV NK+DA+ +
Sbjct: 249 EVRESDVLIHVVDVTHPNYEEQMRVVAETLGELEARDK---PTLVVFNKIDAMEDRTLLR 305
Query: 413 EEYD-----LLISATRGTGLAQLKEKVQDMI 438
+ SA RG GL LKE + D+I
Sbjct: 306 RLRRNHPDAVFASALRGIGLETLKEDLLDLI 336
>gi|170747912|ref|YP_001754172.1| GTP-binding proten HflX [Methylobacterium radiotolerans JCM 2831]
gi|170654434|gb|ACB23489.1| GTP-binding proten HflX [Methylobacterium radiotolerans JCM 2831]
Length = 470
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 209/424 (49%), Gaps = 42/424 (9%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E+ L ++I+ VV+S ISL ++ GKG +E + +R AR + V
Sbjct: 57 LDEATGLAAAIE-LDVVESLAISLPRIRPSTYLGKGRVEEIAGLIR--AREIGLVVMDCA 113
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
L QQ+ L+ + V DR ++++IF A TRE LQ+ A L Y + R + T
Sbjct: 114 LSPVQQRNLEKAWGAKVIDRTGLILEIFGRRASTREGTLQVEHAHLAY--QKSRLVRSWT 171
Query: 231 NMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +G +++ R ++ ER ++++ L+ + R + R + R +P V
Sbjct: 172 HLERQRGGFGFLGGPGETQIEADRRMIQERMTRIERDLDAVVRTRGLHRQSRARVPYPIV 231
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK++L ALT + + ++ LFATLD T LP+ ++ DT+GFIS++
Sbjct: 232 ALVGYTNAGKSSLFNALTRAE-VTAKDMLFATLDPTARATKLPHGETVILSDTVGFISDL 290
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+ F+ TLEDA+ AD+++HV DVS+ D Q + V L+ L +E + ++ V
Sbjct: 291 PTPLIAAFRATLEDAIEADVLLHVRDVSHVDSEAQAEDVGAVLRELGIETSA-DRIIEVW 349
Query: 400 NKVDAVPPGERVT---------------EEYDLLISATRGTGLAQLKEKVQDMILKATGR 444
NK D + ER +L+SA G GLA L +++ + GR
Sbjct: 350 NKADLLDDDERTRLLNLSGQARARNDRDSAAPVLVSALTGEGLAALTSRIEARV----GR 405
Query: 445 KNITMRVR---SGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISS 501
+ V G+ WL ++ + + R + HL + + +F + F ++
Sbjct: 406 NRASFAVALPPEDGAALNWLYENAEILDRRSEADGTLHLAIRIAPEK--EPRFLNRFAAA 463
Query: 502 RKRG 505
R+ G
Sbjct: 464 RRLG 467
>gi|134299122|ref|YP_001112618.1| HSR1-like GTP-binding protein [Desulfotomaculum reducens MI-1]
gi|134051822|gb|ABO49793.1| GTP-binding protein, HSR1-related protein [Desulfotomaculum
reducens MI-1]
Length = 421
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 176/326 (53%), Gaps = 18/326 (5%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD-VLKLH 174
A ++S G V+ + + S D +F GKG + L R + A V +D L
Sbjct: 35 ANLASTAGADVMGTFMQSRQYPDSATFIGKGKAQELAEYCR---EIHANMVVIDRELSPA 91
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTI 226
Q + L+D V V DR +++ IF A+TRE +LQ+ +A+L YL R R
Sbjct: 92 QARNLEDRLGVKVIDRTQLILDIFARRAQTREGKLQVELAQLKYLLPRLTGLGTQLSRLG 151
Query: 227 EDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTN 286
+ L+ R + +R L++ L +++ R ++R ++ + P V++VGYTN
Sbjct: 152 GGIGTRGPGETKLEVDRRRIRKRISDLEQELKEVQRHRSLLRKSRKSEPLPIVSLVGYTN 211
Query: 287 CGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEP 346
GK+TL+K+LT D LV ++LFATLD TT LPN +L DT+GFI N+P L+
Sbjct: 212 AGKSTLLKSLTGADILV-EDKLFATLDPTTRRISLPNNDNVLLTDTVGFIQNLPHHLVAA 270
Query: 347 FKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP 406
F+ TLE+ +D+++H+VD S+P+Y Q + V+ L+ L + +K ++V NK+D V
Sbjct: 271 FRATLEEVQESDLLLHIVDASHPNYEGQIRAVETVLESLHVLDK---PSIMVFNKIDMVK 327
Query: 407 PGERV--TEEYDLLISATRGTGLAQL 430
+ + TE + ISAT G G QL
Sbjct: 328 DVQEIPFTENPRVYISATSGEGSDQL 353
>gi|395778127|ref|ZP_10458640.1| GTP-binding protein HflX [Bartonella elizabethae Re6043vi]
gi|423715615|ref|ZP_17689839.1| GTP-binding protein HflX [Bartonella elizabethae F9251]
gi|395418436|gb|EJF84763.1| GTP-binding protein HflX [Bartonella elizabethae Re6043vi]
gi|395429742|gb|EJF95803.1| GTP-binding protein HflX [Bartonella elizabethae F9251]
Length = 447
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 189/357 (52%), Gaps = 27/357 (7%)
Query: 103 RNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVT 162
R +R L E+ L +I+ VV IIS+ + + FGKG + L + +
Sbjct: 38 RECSRSSRLQEALGLARAIR-LEVVHYEIISIATPRPATLFGKGKADALANYIHEYSIEL 96
Query: 163 AVFVSVD-VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWT 221
A+ +D L QQ+ L+ L+ V DR ++++IF A+T+E LQ+ +A L Y
Sbjct: 97 AI---IDHFLTPIQQRNLEKLWNCKVIDRTALILEIFGDRARTKEGVLQVELAHLSY--Q 151
Query: 222 RYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNK 270
+ R + T++ +G +++ R +L E+ ++++ L + R + R K
Sbjct: 152 KGRLVRSWTHLERQRGGRGFLGGPGETQIEADRRLLQEKIIRIRRELETVIKTRALHRAK 211
Query: 271 KQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYV 330
+++ +P VA+VGYTN GK+TL L+ D L +N LFATLD T + +LP+ IL
Sbjct: 212 RKKTSYPVVALVGYTNAGKSTLFNRLSGADVLA-KNMLFATLDPTLRKVVLPHGKSILLS 270
Query: 331 DTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEK 390
DT+GFISN+PT L+ F+ TLE+ + AD+IIHV D+S+ ++ Q V E L L+++
Sbjct: 271 DTVGFISNLPTNLIAAFRATLEEVIEADLIIHVRDMSDLNHRAHAQDVLEVLSSLDIDID 330
Query: 391 ILEHVLVVGNKVD--------AVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMIL 439
LEH++ V NK+D + L++SA +G G QL + ++ I
Sbjct: 331 DLEHIIEVWNKIDMLDEQALNVLQTSAMTRSNPALMVSALKGDGFDQLLKTIEKRIF 387
>gi|326387750|ref|ZP_08209356.1| small GTP-binding protein domain-containing protein
[Novosphingobium nitrogenifigens DSM 19370]
gi|326207796|gb|EGD58607.1| small GTP-binding protein domain-containing protein
[Novosphingobium nitrogenifigens DSM 19370]
Length = 448
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 195/381 (51%), Gaps = 32/381 (8%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD- 169
L E + L +I G VVD+ I+ + + + FG+G ++ + + A V VD
Sbjct: 44 LDEGQGLARAI-GIVVVDAFILPIRAVRPATLFGEGQVDKIAVACE---QSDAELVIVDG 99
Query: 170 VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT- 221
L QQ+ L+D + V DR ++++IF A T E RLQ+ +A L Y WT
Sbjct: 100 ALSAIQQRNLEDRLKRKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVRSWTH 159
Query: 222 --RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
R R + +++ R ++ R ++++ L +++ R + R ++QR +P +
Sbjct: 160 LERQRGGF-GFLGGPGETQIEADRRLIRGRMARIRRELEQVRRTRGLHRERRQRAPWPII 218
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL LT +++ + LFATLD T LP + + DT+GFIS++
Sbjct: 219 ALVGYTNAGKSTLFNRLTGA-TVMAEDLLFATLDPTMRAIRLPGVDKAILSDTVGFISDL 277
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLEL--EEKILEHVLV 397
PT L+ F+ TLE+ AD+I+HV DV+NP QQK+ V++ L L + EE ++
Sbjct: 278 PTQLVAAFRATLEEVTAADVIVHVRDVANPASAQQKREVEDILTDLGVIGEEGTSIPIVE 337
Query: 398 VGNKVDAVPPGERVTEEYDLL-----------ISATRGTGLAQLKEKVQDMILKATGRKN 446
NK+D + P ER E DL+ ISA G G+ L E++ M+
Sbjct: 338 AWNKIDLLAPDERALRE-DLITHGVPDRPVVPISAATGEGVDALVERLGTMLTGGAQTLE 396
Query: 447 ITMRVRSGGSEYQWLMKHTAV 467
IT+ + + G + WL H +
Sbjct: 397 ITVPM-AEGQKLAWLHAHGEI 416
>gi|99081196|ref|YP_613350.1| HSR1-like GTP-binding protein [Ruegeria sp. TM1040]
gi|99037476|gb|ABF64088.1| GTP-binding protein HSR1-related [Ruegeria sp. TM1040]
Length = 423
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/412 (31%), Positives = 212/412 (51%), Gaps = 33/412 (8%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ +V+ P IK + +R+ L E AL +++ VV ST++ L FG G
Sbjct: 9 RAWVLHPDIK-SDRDRRDAVP--ALEEGVALAAALPDLEVVGSTVVGLPKAHPGMLFGSG 65
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
+E LK + + V V + V + QQ+ L+ ++V + DR ++++IF A+TRE
Sbjct: 66 KIEELKTLFKAE-EVELVLIDGPVSPV-QQRNLEKAWKVKILDRTGLILEIFSDRARTRE 123
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKK 255
LQ+ +A L Y R R + T++ +G +++ R + E+ +L++
Sbjct: 124 GVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDEQLVRLRR 181
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L+K+ R + R + + +P VA+VGYTN GK+TL LT + ++ ++ LFATLD T
Sbjct: 182 QLDKVVKTRTLHRAARAKVPYPIVALVGYTNAGKSTLFNRLTGAE-VMAKDMLFATLDPT 240
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
LP+ ++ DT+GFIS++PT L+ F+ TLE+ + AD+I+HV D+S+ D Q
Sbjct: 241 MRRVELPDGPEVILSDTVGFISDLPTELVASFRATLEEVLAADVILHVRDISHSDTEHQA 300
Query: 376 QHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE-----RVTEEYDLL--ISATRGTGLA 428
+ V++ L L ++E V+ V NK+D + E + + D L ISA G GL
Sbjct: 301 EDVEQILSSLGVDED--RTVIEVWNKIDQLSEEEADACRQRADRNDSLYAISAITGEGLP 358
Query: 429 QLKEKVQDMILKATGRK--NITMRVRSGGSEYQWLMKHTAVSNIREDDTSAE 478
QL + D+ +K G + + S G + WL K V + DT E
Sbjct: 359 QL---LHDIAMKLQGVRVDEVLTLDFSQGKQRAWLFKQDVVQEENQTDTGFE 407
>gi|347531094|ref|YP_004837857.1| small GTP-binding protein domain containing protein [Roseburia
hominis A2-183]
gi|345501242|gb|AEN95925.1| small GTP-binding protein domain protein [Roseburia hominis A2-183]
Length = 414
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 150/273 (54%), Gaps = 15/273 (5%)
Query: 165 FVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY- 223
V D L Q K L+ + V DR +I++ IF A A T E ++Q+ +A+L Y +R
Sbjct: 82 IVCDDELSPAQLKNLEQMLDTKVMDRTLIILDIFAARATTSEGKIQVELAQLKYRLSRLT 141
Query: 224 -------RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
R + L+ R ++ +R +L + L +++ RE+ R K+ R
Sbjct: 142 GLGRSMSRLGGGIGTRGPGEKKLEMDRRLIKDRIAQLNRELKEVRQHREITRAKRTRNGM 201
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P A+VGYTN GK+TL+ LTD ++ ++LFATLD TT LP R IL DT+GFI
Sbjct: 202 PVAAIVGYTNAGKSTLLNRLTDA-GVLEEDKLFATLDPTTRVLELPGRQEILLTDTVGFI 260
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
+P L+E FK TLE+A AD I+HVVD SNP + +Q V +TL L++ EK+ V+
Sbjct: 261 RKLPHHLIEAFKSTLEEAKYADYILHVVDASNPQHEKQMHIVYDTLYQLDIREKM---VI 317
Query: 397 VVGNKVDAV---PPGERVTEEYDLLISATRGTG 426
+ NK DAV P + ++ L +SA GTG
Sbjct: 318 TLFNKQDAVTEREPLHDLRADHTLAVSAREGTG 350
>gi|357054240|ref|ZP_09115331.1| GTP-binding protein HflX [Clostridium clostridioforme 2_1_49FAA]
gi|355385125|gb|EHG32178.1| GTP-binding protein HflX [Clostridium clostridioforme 2_1_49FAA]
Length = 426
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 172/318 (54%), Gaps = 26/318 (8%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG ++ + R++ D R T V D L Q + L+D V DR M+++ IF +
Sbjct: 60 TYLGKGKIDEV-RELLWDTRATGVICD-DELSPAQLRNLEDALDTKVMDRTMVILDIFAS 117
Query: 201 HAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQK 252
A TRE ++Q+ +A+L Y R R + L++ R ++ +R +
Sbjct: 118 RASTREGKIQVELAQLKYRAVRLVGMRNSLSRLGGGIGTRGPGEKKLETDRRLIHQRIGQ 177
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
LK+ L +K RE+ R ++++ + A+VGYTN GK+TL+ LT ++ ++LFATL
Sbjct: 178 LKEELADVKRHREVTRQQREKNSALSAAIVGYTNAGKSTLLNRLTGA-GILAEDKLFATL 236
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT L + +IL DT+GFI +P L+E FK TLE+A +DI++HVVD SNP
Sbjct: 237 DPTTRSYTLEDGQQILLTDTVGFIRKLPHHLIEAFKSTLEEARYSDIVLHVVDCSNPQMD 296
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERV------------TEEYDLLIS 420
Q V ETL+ LE+ +K ++ V NKVD E + + +Y + IS
Sbjct: 297 MQMHVVKETLKELEIVDKT---IVTVFNKVDRFRELEAMGDSSVMQIPRDFSSDYQVRIS 353
Query: 421 ATRGTGLAQLKEKVQDMI 438
A G G+ +L++ +Q +I
Sbjct: 354 ARTGEGMEELQKVLQAII 371
>gi|220912237|ref|YP_002487546.1| GTP-binding proten HflX [Arthrobacter chlorophenolicus A6]
gi|219859115|gb|ACL39457.1| GTP-binding proten HflX [Arthrobacter chlorophenolicus A6]
Length = 553
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 180/348 (51%), Gaps = 32/348 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D + D +F G G + LK V T V VD L
Sbjct: 157 AALAETAGSEVLDGLVQRRAKPDPGTFLGSGKAQELKDIVMSTGADTVV---VDAELAPS 213
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 214 QRRGLEDIVKVKVIDRTGLILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQA 273
Query: 235 ------------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
TK LD +R + R KL++ + +K RE R ++R +
Sbjct: 274 GGQVGGAAAGMGSRGPGETKIELDRRR--IRTRMAKLRREIAAMKPARETKRANRRRNEV 331
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P+VA+ GYTN GK++L+ LTD LV N LFATLD T + + L DT+GF+
Sbjct: 332 PSVAIAGYTNAGKSSLLNRLTDAGVLV-ENALFATLDPTIRKAETSDGLGYTLADTVGFV 390
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++PT L+E F+ TLE+ +D+I+HVVD S+PD Q V + ++ KI E +
Sbjct: 391 RSLPTQLVEAFRSTLEEVADSDLILHVVDASHPDPEGQIAAVRKVFGEVDA-RKIPE--I 447
Query: 397 VVGNKVDAVPP--GERVT--EEYDLLISATRGTGLAQLKEKVQDMILK 440
+V NK DA P ER+ E +++SA G G+A+L + + D I +
Sbjct: 448 IVLNKADAADPFVVERLKQREPRHVVVSARTGEGIAELLKTISDSIPR 495
>gi|116670027|ref|YP_830960.1| small GTP-binding protein [Arthrobacter sp. FB24]
gi|116610136|gb|ABK02860.1| small GTP-binding protein [Arthrobacter sp. FB24]
Length = 522
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 180/350 (51%), Gaps = 32/350 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D + D +F G G + LK V T V VD L
Sbjct: 126 AALAETAGSEVLDGIVQRRAKPDPGTFLGSGKAQELKDIVMSTGADTVV---VDAELAPS 182
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 183 QRRGLEDIVKVKVIDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQA 242
Query: 235 ------------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
TK LD +R + R KL++ + +K RE R ++R
Sbjct: 243 GGQVGGAGAGMGSRGPGETKIELDRRR--IRTRMAKLRREIAAMKPARETKRANRRRNSV 300
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P+VA+ GYTN GK++L+ LTD LV N LFATLD T + + L DT+GF+
Sbjct: 301 PSVAIAGYTNAGKSSLLNRLTDAGVLV-ENALFATLDPTVRKAETADGLGYTLADTVGFV 359
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++PT L+E F+ TLE+ +D+I+HVVDVS+PD Q V ++ K+ E +
Sbjct: 360 RSLPTQLVEAFRSTLEEVADSDLILHVVDVSHPDPEGQIAAVRAVFSEVDA-RKVPE--I 416
Query: 397 VVGNKVDAVPP--GERVT--EEYDLLISATRGTGLAQLKEKVQDMILKAT 442
+V NK DA P ER+ E +++SA G G+A+L + + + I + +
Sbjct: 417 IVLNKADAADPFVVERLKQREPRHVVVSARTGQGIAELLKAISESIPRPS 466
>gi|393718426|ref|ZP_10338353.1| HSR1-like GTP-binding protein [Sphingomonas echinoides ATCC 14820]
Length = 428
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 196/404 (48%), Gaps = 28/404 (6%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D LAE+ L +I VVD I + + + GKG LE L VR VF +
Sbjct: 33 DARLAETAGLAMAIH-VEVVDRVAIKVRALQPSTLIGKGQLEALAATVRMAEAELVVFDA 91
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LW 220
L QQ+ L+ V DR ++++IF A T E RLQ+ +A L Y W
Sbjct: 92 S--LTPVQQRNLEKALSAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVRSW 149
Query: 221 T---RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
T R R + +++ R ++ +R +LKK L ++ R + R+++QR +P
Sbjct: 150 THLERQRGGF-GFLGGPGETQIEADRRLIRDRMARLKKELEQVSRTRGLHRDRRQRAPWP 208
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+A+VGYTN GK+TL +T D ++ + LFATLD T + LP + + DT+GF+S
Sbjct: 209 VIALVGYTNAGKSTLFNRMTGAD-VMAEDLLFATLDPTLRQIALPGIDKAILSDTVGFVS 267
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
+PT L+ FK TLE+ + AD++IHV D+++PD + QK V+ L+ + ++ + +
Sbjct: 268 ELPTQLVAAFKATLEEVVSADLLIHVRDIAHPDTIAQKDDVEAVLRDIGVDLSVPR--IE 325
Query: 398 VGNKVDAVPP-------GERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMR 450
NK+D + GE + ISA G G++ L + V ++ + R I +
Sbjct: 326 AWNKLDMLDADDRAELLGEAARRDDVAAISALSGEGVSALLDTVAALLTSSHRRYTILLD 385
Query: 451 VRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKF 494
G+ WL H + E E + +V M + +F
Sbjct: 386 A-GDGAGAAWLHAH---GEVLEQSVEGEQAIYEVRMAERDYERF 425
>gi|212715540|ref|ZP_03323668.1| hypothetical protein BIFCAT_00438 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212660907|gb|EEB21482.1| hypothetical protein BIFCAT_00438 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 496
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 177/363 (48%), Gaps = 29/363 (7%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR 156
W + + L E AL + G V D + + D ++ G G L V
Sbjct: 84 WSSRETTQAQAEESLRELAALAET-AGAVVCDGLLQHRIKPDAATYVGSGKARELAGIVA 142
Query: 157 GDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAEL 216
+ T V D L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L
Sbjct: 143 QEEADT--IVVDDDLPPSQRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQL 200
Query: 217 PYLWTRYR-----------TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNKLK 261
Y+ R R ++G ++K R V+ R KL+K + ++
Sbjct: 201 EYMLPRLRGWGGSLSRQAGGRAAGDAGIGSRGPGETKIEMDRRVIRSRIAKLRKQIEQMA 260
Query: 262 GQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGML 321
R++ R ++R PTVAVVGYTN GK++L LT LV N LFATLD
Sbjct: 261 PARDVKRGARRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRARA 319
Query: 322 PNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDET 381
+ R YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q VD+
Sbjct: 320 KDGRRYAYVDTVGFVRRLPTQLIEAFKSTLEEVAEADLIVHVVDGSHPDPFSQIDAVDDV 379
Query: 382 LQHLELEEKILEHVLVVGNKVDAVPPGER------VTEEYDLLISATRGTGLAQLKEKVQ 435
L ++ E I ++V NK D + R + E Y ++SA G G+ +L+ +V+
Sbjct: 380 LADIDGVETI--PTIIVFNKADRMDEATRERIEALMPEAY--IVSAFSGDGVDELRMQVE 435
Query: 436 DMI 438
M+
Sbjct: 436 SML 438
>gi|340776466|ref|ZP_08696409.1| GTP-binding protein hflX [Acetobacter aceti NBRC 14818]
Length = 439
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 195/374 (52%), Gaps = 25/374 (6%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
+ G G +E L+ V + + V + L QQ+ L+ V DR +++ IF A
Sbjct: 66 TLLGTGQVESLREAV-AEKEIKVVVIDAK-LSPGQQRNLEKALGCKVIDRTGLILDIFGA 123
Query: 201 HAKTREARLQIAIAELPY-------LWT---RYRTIEDATNMNITKGFLDSKRMVLMERE 250
A TRE LQ+ +A L Y LWT R R + +++ R ++ +R
Sbjct: 124 RAATREGSLQVELAHLEYQRSRLVRLWTHLERQRGGF-GFLGGPGETQIEADRRIIGDRI 182
Query: 251 QKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFA 310
+LK+ L +++ R + R+ ++R FP VA+VGYTN GK+TL ALT S+ ++QLFA
Sbjct: 183 VRLKRELEQVRRTRGLHRSARKRVPFPVVALVGYTNAGKSTLFNALTGA-SVYAQDQLFA 241
Query: 311 TLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPD 370
TLD T LP+ +++ DT+GFIS++PT L+ F+ TLE+ ADII+HV D+++PD
Sbjct: 242 TLDPTMRAIRLPSGRQVILSDTVGFISDLPTELIAAFRATLEEVAEADIILHVRDIAHPD 301
Query: 371 YLQQKQHVDETLQHLELEEKILEH-----VLVVGNKVDAVPPGERVTEEYDLL-ISATRG 424
Q+ V L +E + +L+H V+ V NK D + E+V + ISA G
Sbjct: 302 TAAQRSDVLSVLSGME-RDGMLDHEWRSRVIEVLNKADLLGGPEQVEHHGTAVPISAITG 360
Query: 425 TGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDV 484
GL +L + ++ A ++ V +G + WL +H V RED + H+ + V
Sbjct: 361 DGLPELMAAIDAHMVHAMELLRYSIPVEAGEA-LAWLYQHGEVVT-REDHET--HMDVLV 416
Query: 485 VMTDVIMNKFKHEF 498
+ + +F+ +F
Sbjct: 417 RLREADRARFEGQF 430
>gi|167040081|ref|YP_001663066.1| small GTP-binding protein [Thermoanaerobacter sp. X514]
gi|256752602|ref|ZP_05493456.1| GTP-binding proten HflX [Thermoanaerobacter ethanolicus CCSD1]
gi|300914164|ref|ZP_07131480.1| GTP-binding proten HflX [Thermoanaerobacter sp. X561]
gi|307724600|ref|YP_003904351.1| GTP-binding proten HflX [Thermoanaerobacter sp. X513]
gi|166854321|gb|ABY92730.1| small GTP-binding protein [Thermoanaerobacter sp. X514]
gi|256748540|gb|EEU61590.1| GTP-binding proten HflX [Thermoanaerobacter ethanolicus CCSD1]
gi|300889099|gb|EFK84245.1| GTP-binding proten HflX [Thermoanaerobacter sp. X561]
gi|307581661|gb|ADN55060.1| GTP-binding proten HflX [Thermoanaerobacter sp. X513]
Length = 413
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 184/343 (53%), Gaps = 22/343 (6%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
+ DK + GKG LE LK V + V V V+ D L Q K ++D V V DR +++
Sbjct: 52 TIDKAHYIGKGKLEELKFFVE-NQEVDLVIVN-DELTGTQIKNIEDFLNVKVIDRTNLIL 109
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLM 247
IF AK+RE LQ+ +A+L Y R R + L++ R +
Sbjct: 110 DIFAKRAKSREGMLQVELAQLKYRLPRLVGLGGQLSRLGGGIGTRGPGETKLETDRRHIK 169
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
R + ++K L +++ R + R ++++ + P +A+VGYTN GK+TL+ ALT+ + V ++
Sbjct: 170 NRIKAIEKKLEEIERHRSLQRERRKKNRIPVIAIVGYTNAGKSTLLNALTNAEVYV-EDK 228
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T +LP+ ++ +DT+GFI +P L+E FK TLE+A AD+++HV+DV+
Sbjct: 229 LFATLDPTARRLVLPSGREVILIDTVGFIRKLPHDLVEAFKSTLEEAKYADLLLHVIDVT 288
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV---DAVPPGERVTEEYDLLISATRG 424
+PD ++ + V++ L L++ I + V NK+ D VP G E ++ ISA
Sbjct: 289 SPDMEEKIKVVEKVLSDLDV---INTPRINVFNKIDLLDVVPKG----NEKEIYISAKNK 341
Query: 425 TGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
GL +L + ++ I K N + EY +L + T V
Sbjct: 342 IGLDKLLQAIEKEIFKDVEIVNFLLPY-DKTKEYNYLKEKTKV 383
>gi|209963483|ref|YP_002296398.1| GTP-binding protein hflX [Rhodospirillum centenum SW]
gi|209956949|gb|ACI97585.1| GTP-binding protein hflX, putative [Rhodospirillum centenum SW]
Length = 430
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 182/343 (53%), Gaps = 27/343 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN- 233
QQ+ L+ ++ V DR ++++IF A A+TRE +LQ+ +A L Y R R + T++
Sbjct: 71 QQRNLEKAWKAKVIDRTGLILEIFGARARTREGQLQVELAALTY--QRSRLVRSWTHLER 128
Query: 234 ----------ITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVG 283
+ L+ R ++ ER +LK L +++ R + R +++ +P VA+VG
Sbjct: 129 QRGGFGFLGGPGESQLEIDRRLIGERIARLKAELEEVRRTRGLHRRAREKVPYPVVALVG 188
Query: 284 YTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTL 343
YTN GK+TL + D + ++ LFATLD T LP+ +I+ DT+GFIS++P L
Sbjct: 189 YTNAGKSTLFNRMAGAD-VFAKDLLFATLDPTMRAITLPSNRKIILSDTVGFISDLPHGL 247
Query: 344 LEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+E F+ TLE+ ADI++HV DVS+PD QK V+ L+ L +E V+ V NK+D
Sbjct: 248 VEAFRATLEEVQAADIVLHVRDVSHPDTEAQKADVETVLRELGIEVDSDARVVEVLNKID 307
Query: 404 AVPPGER------VTEEYD-LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVR-SGG 455
VP GER D + ISA G GL L + + ++ R +++ V + G
Sbjct: 308 LVPEGERDALLRQARRTGDTVAISALTGEGLGGLFDLIDRRMV--ADRDVVSVAVDLADG 365
Query: 456 SEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
+ WL + V ++DD A L+ V + + +F+ F
Sbjct: 366 AALAWLYQRGEVLERQDDDARA---LVRVGLETADVGRFRERF 405
>gi|182678502|ref|YP_001832648.1| GTP-binding proten HflX [Beijerinckia indica subsp. indica ATCC
9039]
gi|182634385|gb|ACB95159.1| GTP-binding proten HflX [Beijerinckia indica subsp. indica ATCC
9039]
Length = 466
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 192/375 (51%), Gaps = 32/375 (8%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQ 184
+VD +++L +F G G + L ++ A V +D L QQ+ L+
Sbjct: 68 IVDQRLLTLAEIKPSTFLGTGKVAELGEAIKA---AEAELVIMDCALSPVQQRNLEKALG 124
Query: 185 VPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------ 238
V DR ++++IF A+TRE LQ+ +A L Y + R + T++ +G
Sbjct: 125 AKVIDRTGLILEIFGRRARTREGSLQVELAHLAY--QKSRLVRSWTHLERQRGGFGFLGG 182
Query: 239 -----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLI 293
+++ R +L ER +L++ L +K R + R ++ +P +A+VGYTN GK+TL
Sbjct: 183 PGETQIEADRRLLQERMTRLEQDLAGVKRTRGLHRKTRRDVPYPIIALVGYTNAGKSTLF 242
Query: 294 KALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLED 353
LT+ D L +N LFATLD T LP+ +++ DT+GFIS++PT L+ F+ TLE+
Sbjct: 243 NRLTEADVLA-QNMLFATLDPTLRSLTLPHGAKVILSDTVGFISDLPTMLVSAFRATLEE 301
Query: 354 AMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERV-- 411
+ AD+I+HV D+++ D Q Q V+ L L ++ + +L V NK D + +
Sbjct: 302 VLEADLILHVRDIAHQDAEAQCQDVESVLAELGIDMADEQRILEVWNKADLLDEEAQAAA 361
Query: 412 ---------TEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLM 462
E +L+SA G G+A L+ +++ + + +IT+ + G WL
Sbjct: 362 LNNARRWKNAENQPILVSALTGQGVATLEAEIEARLARGRLLFDITLDP-ANGEGLHWLH 420
Query: 463 KHTAV--SNIREDDT 475
+HT V +I ED T
Sbjct: 421 EHTEVMHKSIDEDGT 435
>gi|302382897|ref|YP_003818720.1| GTP-binding proten HflX [Brevundimonas subvibrioides ATCC 15264]
gi|302193525|gb|ADL01097.1| GTP-binding proten HflX [Brevundimonas subvibrioides ATCC 15264]
Length = 443
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 194/387 (50%), Gaps = 28/387 (7%)
Query: 131 IISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDR 190
++ L + FG G +E L +R A A + D+ + QQ+ L+ + V DR
Sbjct: 65 VVRLRKTTPATLFGTGKVEELAALIRA-AEAEAAVIDDDLTPV-QQRNLEKEWDCKVIDR 122
Query: 191 YMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------L 239
++++IF A+T+E RLQ+ +A L Y + R + T++ +G +
Sbjct: 123 TGLILEIFGRRARTKEGRLQVELARLDY--EKSRLVRTWTHLERQRGGTGSTGGPGETQI 180
Query: 240 DSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDD 299
+ R ++ +R KLK L +++ R + R ++++ FP VA+VGYTN GK+TL LT
Sbjct: 181 ELDRRLIADRIVKLKGELEEVRRTRGLHRKQRKKAPFPAVALVGYTNAGKSTLFNRLTGS 240
Query: 300 DSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADI 359
+ L ++ LFATLD T LP + DT+GFIS++P L+E F+ TLE+ AD+
Sbjct: 241 EVLA-KDLLFATLDTTQRTIRLPQGRPAIIADTVGFISDLPHELVESFRATLEEVGEADL 299
Query: 360 IIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD--- 416
I+HV D+++ D Q + V++ L+ +E E +L V NK D + P R E
Sbjct: 300 ILHVRDIASADTAAQAKDVEDVLKQIEQPEGKPRRILEVWNKTDLLDPEAREAVEGQAAR 359
Query: 417 -----LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIR 471
+ +SA G G+ L++ + D+I + I S G WL +H V+
Sbjct: 360 SGNTAVAVSAWTGQGIETLRQAITDLIDDDPETELILQ--PSQGEALAWLYEHGRVTARD 417
Query: 472 EDDTSAEHLLLDVVMTDVIMNKFKHEF 498
DD +LL V + M +F+ +F
Sbjct: 418 TDDQG--RMLLTVRLDPQAMGRFERQF 442
>gi|167037414|ref|YP_001664992.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115827|ref|YP_004185986.1| GTP-binding proten HflX [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166856248|gb|ABY94656.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319928918|gb|ADV79603.1| GTP-binding proten HflX [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 413
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 184/343 (53%), Gaps = 22/343 (6%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
+ DK + GKG LE LK V + V V V+ D L Q K ++D V V DR +++
Sbjct: 52 TIDKAHYIGKGKLEELKFFVE-NQEVDLVIVN-DELTGTQIKNIEDFLNVKVIDRTNLIL 109
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLM 247
IF AK+RE LQ+ +A+L Y R R + L++ R +
Sbjct: 110 DIFAKRAKSREGMLQVELAQLKYRLPRLVGLGGQLSRLGGGIGTRGPGETKLETDRRHIK 169
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
R + ++K L +++ R + R ++++ + P +A+VGYTN GK+TL+ ALT+ + V ++
Sbjct: 170 NRIKAIEKKLEEIERHRSLQRERRKKNRIPVIAIVGYTNAGKSTLLNALTNAEVYV-EDK 228
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T +LP+ ++ +DT+GFI +P L+E FK TLE+A AD+++HV+DV+
Sbjct: 229 LFATLDPTARRLVLPSGREVILIDTVGFIRKLPHDLVEAFKSTLEEAKYADLLLHVIDVT 288
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV---DAVPPGERVTEEYDLLISATRG 424
+PD ++ + V++ L L++ I + V NK+ D VP G E ++ ISA
Sbjct: 289 SPDMEEKIKVVEKVLSDLDV---INTPRINVFNKIDLLDVVPKG----NEKEIYISAKNK 341
Query: 425 TGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
GL +L + ++ I K N + EY +L + T V
Sbjct: 342 IGLDKLLQAIEKEIFKDVEIVNFLLPY-DKTKEYNYLKEKTKV 383
>gi|415712204|ref|ZP_11464700.1| GTP-binding protein [Gardnerella vaginalis 55152]
gi|388057431|gb|EIK80263.1| GTP-binding protein [Gardnerella vaginalis 55152]
Length = 505
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 178/343 (51%), Gaps = 26/343 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLH 174
A ++ G V D + D ++ G G EL + DA V D L
Sbjct: 110 AALAKTAGAVVCDGMLQQRYRPDAATYVGSGKARELAAVVAQNDADTIVVD---DDLPPS 166
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--- 231
Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 167 QRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQLQYMLPRLRGWGAALSRQA 226
Query: 232 --------MNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++G ++K R + R KL+ + ++ RE R ++RQ PTV
Sbjct: 227 GGRAAGDAGIGSRGPGETKIEMDRRAIRNRISKLRHDIEQMAPTRETKRGSRRRQDIPTV 286
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GK+++I LT LV N LFATLD + + + VDT+GF+ +
Sbjct: 287 AVVGYTNAGKSSIINRLTGSKELV-ENALFATLDTAVRKSLTKDGRAYTLVDTVGFVRRL 345
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E FK TLE+ AD+I+HVVD S+PD + Q + V+E L ++ E I++ ++
Sbjct: 346 PTQLVEAFKSTLEEVGNADVILHVVDGSHPDPVSQIEAVNEVLAQIDGVEDIVQ--IIAF 403
Query: 400 NKVDAV--PPGERVTEEY--DLLISATRGTGLAQLKEKVQDMI 438
NK D + P R+ Y L++SA GT + +L+ ++++++
Sbjct: 404 NKSDVMQEPMRLRLQSLYPDSLIVSAASGTNIDRLRTRIENLL 446
>gi|338738898|ref|YP_004675860.1| GTPase (HflX) [Hyphomicrobium sp. MC1]
gi|337759461|emb|CCB65290.1| putative GTPase (HflX) [Hyphomicrobium sp. MC1]
Length = 470
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 220/441 (49%), Gaps = 33/441 (7%)
Query: 53 LVKFSDNSQDDLEESDEFKTIRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFM-- 110
++ +N +D+ E E K R +A + VV P +K K + D
Sbjct: 1 MIARPENGEDERREG-EGKRKRRKASEETRAPRTRTLVVVPALKRPLKTRGVANADAQIH 59
Query: 111 -----LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVF 165
LAE+ L +I ++DS ++ + + G G +E +K +V + + V
Sbjct: 60 SPENRLAEAVGLAKAID-LDIIDSAVVPIAEPRPSTLLGSGKVEEIKDRV-AELEIGLVV 117
Query: 166 VSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY------- 218
V ++ + QQ+ L+ + V DR ++++IF A+TRE LQ+ +A L Y
Sbjct: 118 VDYNITPV-QQRNLEKAWNAKVLDRTGLILEIFGERARTREGVLQVELAHLTYQKGRLVR 176
Query: 219 LWT---RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQK 275
WT R R + ++ R +L +R +KK L ++ R++ R +++
Sbjct: 177 AWTHLERQRGGG-GFLGGPGEAQIELDRRMLQDRIDAIKKDLAEVVKTRDLHRKGRRKVP 235
Query: 276 FPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGF 335
+P VA+VGYTN GK+TL +T +V +Q+FATLD T E LP+ RI+ DT+GF
Sbjct: 236 YPIVAIVGYTNAGKSTLFNKITGA-GVVAMDQVFATLDPTMREVKLPSARRIILSDTVGF 294
Query: 336 ISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILE-H 394
IS++PT L+ F+ TLE+ + AD+I+HV D+++ + Q Q V++ L L ++ +E +
Sbjct: 295 ISDLPTMLVAAFRATLEEVVEADLILHVRDIAHEETEAQAQDVEKVLSELGIDTLPIESN 354
Query: 395 VLVVGNKVDAVPPGERVTEEYD--------LLISATRGTGLAQLKEKVQDMILKATGRKN 446
+L V NK+D + R +++ +L+SA G G+A L E + D L A+
Sbjct: 355 ILEVWNKIDLLSSDRRSELQHEVQRNARPPVLVSAETGEGMAPLLETI-DTRLGASDEII 413
Query: 447 ITMRVRSGGSEYQWLMKHTAV 467
+ S G+ WL + T V
Sbjct: 414 DVIVPGSAGALLNWLHETTDV 434
>gi|260907227|ref|ZP_05915549.1| GTP-binding proten HflX [Brevibacterium linens BL2]
Length = 491
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 179/345 (51%), Gaps = 31/345 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D+ I + D ++ GKG L V A V A V +D L
Sbjct: 92 AALAETAGSEVLDAIIQRRETPDPGTYLGKGKAAELAEIV---ASVGADTVIIDSELAPS 148
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 149 QRRGLEDVIKVKVVDRVALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESLSRQA 208
Query: 235 -----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
TK LD +R + R KL++ + + R+ R + R P
Sbjct: 209 GGRVAGGAGIGSRGPGETKIELDRRR--IRARMSKLRRQITAMAPSRDTKRKNRARNHIP 266
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+VA+VGYTN GK++L+ LTD + +V +N LFATLD T + + + Y DT+GF+
Sbjct: 267 SVAIVGYTNAGKSSLLNQLTDAEVMV-QNALFATLDPTVRQSRTADGITFTYTDTVGFVR 325
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
N+P L+E F+ TLE+A +D+++H+VD S+PD Q V E L+ +E + I E L+
Sbjct: 326 NLPHQLVEAFRSTLEEASDSDLLLHIVDASHPDPHGQIHAVREVLKDVETGD-IPE--LL 382
Query: 398 VGNKVD----AVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMI 438
V NK D AV G +SA G+ +L E ++ M+
Sbjct: 383 VFNKADIADEAVITGLHAEYPEARFVSAVTKEGVGELVETIESML 427
>gi|395493250|ref|ZP_10424829.1| HSR1-like GTP-binding protein [Sphingomonas sp. PAMC 26617]
Length = 430
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 190/378 (50%), Gaps = 25/378 (6%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D LAE+ L +I VVD + + + + GKG LE L VR VF +
Sbjct: 33 DARLAETAGLAMAIH-VEVVDRVAVKVRALQPATLIGKGQLEALAATVRMAEAELVVFDA 91
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LW 220
L QQ+ L+ V DR ++++IF A T E RLQ+ +A L Y W
Sbjct: 92 S--LTPVQQRNLEKALSAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVRSW 149
Query: 221 T---RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
T R R + +++ R ++ +R +LKK L ++ R + R+++QR +P
Sbjct: 150 THLERQRGGF-GFLGGPGETQIEADRRLIRDRMARLKKELEQVSRTRGLHRDRRQRAPWP 208
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+A+VGYTN GK+TL +T D ++ + LFATLD T + LP + + DT+GF+S
Sbjct: 209 VIALVGYTNAGKSTLFNRMTGAD-VMAEDLLFATLDPTLRQIALPGIDKAILSDTVGFVS 267
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
+PT L+ FK TLE+ + AD++IHV D+++PD + QK V+ L+ + ++ + +
Sbjct: 268 ELPTQLVAAFKATLEEVVSADLLIHVRDIAHPDTIAQKDDVEAVLRDIGVDASVPR--IE 325
Query: 398 VGNKVDAVPP-------GERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMR 450
NK+D + GE E + +SA G G+A L + V + L A+ R+
Sbjct: 326 AWNKLDLLDADERAEMIGEAARREDVVALSALSGEGVADLLDTVAGL-LTASHRQYAITL 384
Query: 451 VRSGGSEYQWLMKHTAVS 468
+ G+ WL H VS
Sbjct: 385 DAADGAGAAWLHAHGEVS 402
>gi|425735460|ref|ZP_18853774.1| GTP-binding protein [Brevibacterium casei S18]
gi|425479866|gb|EKU47038.1| GTP-binding protein [Brevibacterium casei S18]
Length = 480
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 182/352 (51%), Gaps = 45/352 (12%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D+ + D ++ G+G LK V V A V +D L
Sbjct: 81 AALAETAGSEVLDAIVQRRDKPDPGTYLGRGKAAELKEIVEA---VGADTVIIDSELAPS 137
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 138 QRRGLEDVIKVKVVDRVALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESLSRQA 197
Query: 235 -----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
TK LD +R + R KL++ + + R+ R + R P
Sbjct: 198 GGRVAGGAGIGSRGPGETKIELDRRR--IRTRMAKLRRQIAGMAPARDTKRKNRARNHVP 255
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+VA+VGYTN GK++L+ LTD + +V +N LFATLD T + + + Y DT+GF+
Sbjct: 256 SVAIVGYTNAGKSSLLNRLTDAEVMV-QNALFATLDPTVRQSRTSDGITFTYTDTVGFVR 314
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
N+P L+E F+ TLE+A +D+++HVVD S+PD Q V E L ++ + I E L+
Sbjct: 315 NLPHQLVEAFRSTLEEASDSDLLLHVVDASHPDPQGQIHAVREVLGDVDTGD-IPE--LL 371
Query: 398 VGNKVD-----------AVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMI 438
V NKVD A PG R +SAT G G+A+L E +++ +
Sbjct: 372 VFNKVDLADETVVTALRAEYPGAR-------FVSATTGEGIAELVETIEEKL 416
>gi|296114949|ref|ZP_06833595.1| GTP-binding protein hflX [Gluconacetobacter hansenii ATCC 23769]
gi|295978507|gb|EFG85239.1| GTP-binding protein hflX [Gluconacetobacter hansenii ATCC 23769]
Length = 436
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 202/393 (51%), Gaps = 27/393 (6%)
Query: 94 FIKWGKKMKRNTTR--DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELL 151
+ W + +++ +R + L E+ L +SI G ++ ++ L + + G G +E L
Sbjct: 15 ILPWERPDRQDESRAAEARLEEAVGLAASI-GLVIICKAVLLLRARRPATLLGSGQVESL 73
Query: 152 KRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQI 211
VR D +T V + + + QQ+ L+ V DR +++ IF A T+E LQ+
Sbjct: 74 HATVRAD-NITVVIIDSRLTPV-QQRNLERALGCKVIDRTALILDIFGERAATKEGSLQV 131
Query: 212 AIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKL 260
+A L Y R R + T++ +G +++ R ++ +R +LK+ L ++
Sbjct: 132 ELAHLEY--QRSRLVRTWTHLERQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQV 189
Query: 261 KGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGM 320
+ R + R ++R FP VA+VGYTN GK+TL ALT S+ ++QLFATLD T
Sbjct: 190 RRTRGLHRQARRRVPFPVVALVGYTNAGKSTLFNALTGA-SVYAQDQLFATLDPTMRGIR 248
Query: 321 LPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDE 380
LP+ +I+ DT+GFIS++PT L+ F+ TLE+ ADII+HV D S+P+ Q+ V E
Sbjct: 249 LPSGRQIILSDTVGFISDLPTELIAAFRATLEEVAEADIILHVRDASHPETSAQRADVVE 308
Query: 381 TLQHLE----LEEKILEHVLVVGNKVDAVPPGERV-TEEYDLLISATRGTGLAQLKEKVQ 435
L+ + +E V+ V NK D + + V ++ISA G GL L +
Sbjct: 309 VLEGMAHSGTIEPDWQSRVIEVLNKADLMGGRDAVGARPGAIVISAITGDGLPDLLAAID 368
Query: 436 DMILKATGRKNITMRVR-SGGSEYQWLMKHTAV 467
+ + A + + RV S G+ WL +H V
Sbjct: 369 ERLTHAM--ELVRYRVPLSDGAAMAWLYEHGEV 399
>gi|404253578|ref|ZP_10957546.1| HSR1-like GTP-binding protein [Sphingomonas sp. PAMC 26621]
Length = 430
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 190/378 (50%), Gaps = 25/378 (6%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D LAE+ L +I VVD + + + + GKG LE L VR VF +
Sbjct: 33 DARLAETAGLAMAIH-VEVVDRVAVKVRALQPATLIGKGQLEALAATVRMAEAELVVFDA 91
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LW 220
L QQ+ L+ V DR ++++IF A T E RLQ+ +A L Y W
Sbjct: 92 S--LTPVQQRNLEKALSAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVRSW 149
Query: 221 T---RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
T R R + +++ R ++ +R +LKK L ++ R + R+++QR +P
Sbjct: 150 THLERQRGGF-GFLGGPGETQIEADRRLIRDRMARLKKELEQVSRTRGLHRDRRQRAPWP 208
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+A+VGYTN GK+TL +T D ++ + LFATLD T + LP + + DT+GF+S
Sbjct: 209 VIALVGYTNAGKSTLFNRMTGAD-VMAEDLLFATLDPTLRQIALPGIDKAILSDTVGFVS 267
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
+PT L+ FK TLE+ + AD++IHV D+++PD + QK V+ L+ + ++ + +
Sbjct: 268 ELPTLLVAAFKATLEEVVSADLLIHVRDIAHPDTIAQKDDVEAVLRDIGVDASVPR--IE 325
Query: 398 VGNKVDAVPP-------GERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMR 450
NK+D + GE E + +SA G G+A L + V + L A+ R+
Sbjct: 326 AWNKLDLLDADERAEMIGEAARREDVVALSALSGEGVADLLDTVAGL-LTASHRQYAITL 384
Query: 451 VRSGGSEYQWLMKHTAVS 468
+ G+ WL H VS
Sbjct: 385 DAADGAGAAWLHAHGEVS 402
>gi|452910866|ref|ZP_21959543.1| GTP-binding protein HflX [Kocuria palustris PEL]
gi|452834038|gb|EME36842.1| GTP-binding protein HflX [Kocuria palustris PEL]
Length = 579
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 182/345 (52%), Gaps = 27/345 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D I + D ++ G G LK V A A V VD L
Sbjct: 148 AALAETAGSEVLDGIIQRRTNPDPATYLGSGKALELKDIV---AATGADTVVVDEELAPS 204
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HAK++E + Q+ +A+L Y+ R R ++ +
Sbjct: 205 QRRALEDVVKVKVIDRTGLILDIFAQHAKSKEGKAQVELAQLEYMLPRLRGWGESLSRQA 264
Query: 235 -----------TKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++G ++K R + R KL++ + +K RE R ++R P+V
Sbjct: 265 GGRAAGGEGIGSRGPGETKIEMDRRRIRARMAKLRREIAAMKPSREAKRLNRRRNSVPSV 324
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+ GYTN GK++L+ LTD LV N LFATLD T + P+ + DT+GF+ ++
Sbjct: 325 AIAGYTNAGKSSLLNRLTDAGVLV-ENALFATLDPTVRKAETPDGIGYTLSDTVGFVRSL 383
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E F+ TLE+ +D+I+HVVD S+PD Q + V E L ++ + L ++ +
Sbjct: 384 PTQLVEAFRSTLEEVADSDVIVHVVDASHPDPEGQIRAVHEVLADIDALD--LPEIIAL- 440
Query: 400 NKVDAVPP----GERVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
NK DA P R T +++SA G G+ +LK+++ + I +
Sbjct: 441 NKADAADPFVVQRMRNTHRDVVVVSARTGEGIDELKQRISEAIPR 485
>gi|359775366|ref|ZP_09278704.1| putative GTP-binding protein HflX [Arthrobacter globiformis NBRC
12137]
gi|359307329|dbj|GAB12533.1| putative GTP-binding protein HflX [Arthrobacter globiformis NBRC
12137]
Length = 525
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 184/359 (51%), Gaps = 36/359 (10%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D + D +F G G LK V T V VD L
Sbjct: 129 AALAETAGSEVLDGLVQRRAKPDPGTFLGAGKALELKDVVMSTGADTVV---VDAELAPS 185
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 186 QRRGLEDIVKVKVIDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQA 245
Query: 235 ------------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
TK LD +R + R KL++ + +K RE R ++R +
Sbjct: 246 GGQVGGAGAGMGSRGPGETKIELDRRR--IRTRMAKLRREIAAMKPARETKRANRRRNEV 303
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P+VA+ GYTN GK++L+ LTD LV N LFATLD T + + + DT+GF+
Sbjct: 304 PSVAIAGYTNAGKSSLLNRLTDAGVLV-ENALFATLDPTVRKAETSDGVGYTLADTVGFV 362
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++PT L+E F+ TLE+ AD+I+HVVDVS+PD Q V ++ K+ E +
Sbjct: 363 RSLPTQLVEAFRSTLEEVADADLILHVVDVSHPDPEGQIAAVRSVFAEVDA-RKVPE--I 419
Query: 397 VVGNKVDAVPP--GERVT--EEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
+V NK DA P ER+ E +++SA G G+A+L + + + I R N+ M++
Sbjct: 420 IVLNKADAADPFVVERLKQREPRHVVVSARTGEGIAELLKAISESI----PRPNVKMQL 474
>gi|261337501|ref|ZP_05965385.1| GTP-binding protein [Bifidobacterium gallicum DSM 20093]
gi|270277898|gb|EFA23752.1| GTP-binding protein [Bifidobacterium gallicum DSM 20093]
Length = 523
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 186/362 (51%), Gaps = 31/362 (8%)
Query: 105 TTRDFMLAESK------ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGD 158
++RD L +++ A ++ G +VVD + D ++ G G + + V +
Sbjct: 100 SSRDTTLTQAEESLRELAALAETAGAQVVDGVLQHRSRPDSATYVGSGKAKEIADIVAVN 159
Query: 159 ARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY 218
T + V D L Q++ L+D+ +V V DR +++ IF HA++RE + Q+ +A+L Y
Sbjct: 160 EADT-IIVDAD-LPPSQRRALEDVTRVKVVDRTAVILDIFAQHAQSREGKAQVELAQLQY 217
Query: 219 LWTRYRTIEDATNMNI------------TKGFLDSK----RMVLMEREQKLKKALNKLKG 262
+ R R A + ++G ++K R V+ R +L+K + ++
Sbjct: 218 MLPRLRGWGAALSRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRTRIARLRKQIAQMAP 277
Query: 263 QREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLP 322
R++ R ++R PTVAVVGYTN GK++L LT LV N LFATLD
Sbjct: 278 SRQVKRGSRRRTGLPTVAVVGYTNAGKSSLTNRLTGSSELV-ENALFATLDTAVRRAQSA 336
Query: 323 NRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETL 382
+ R YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q V++ L
Sbjct: 337 DGRRYAYVDTVGFVRRLPTQLVEAFKSTLEEVGEADLIVHVVDSSHPDPFSQIDAVNDVL 396
Query: 383 QHLELEEKILEHVLVVGNKVDAVPPG--ERVTE--EYDLLISATRGTGLAQLKEKVQDMI 438
+ ++ +I L V NK D + ER+ ++S+ G G+ L+E V+ ++
Sbjct: 397 KDIDGVGEI--PTLTVFNKADLIDNAKRERIASLMPDAFIVSSASGEGIDTLRESVEGLL 454
Query: 439 LK 440
+
Sbjct: 455 PR 456
>gi|415702683|ref|ZP_11458829.1| GTP-binding protein [Gardnerella vaginalis 284V]
gi|388053229|gb|EIK76220.1| GTP-binding protein [Gardnerella vaginalis 284V]
Length = 505
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 177/343 (51%), Gaps = 26/343 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLH 174
A ++ G V D + D ++ G G EL + DA V D L
Sbjct: 110 AALAKTAGAVVCDGMLQQRYRPDAATYVGSGKARELAAVVAQNDADTIVVD---DDLPPS 166
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--- 231
Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 167 QRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQLQYMLPRLRGWGAALSRQA 226
Query: 232 --------MNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++G ++K R + R KL+ + ++ RE R ++RQ PTV
Sbjct: 227 GGRAAGDAGIGSRGPGETKIEMDRRAIRNRISKLRHDIEQMAPTRETKRGSRRRQDIPTV 286
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GK+++I LT LV N LFATLD + + + VDT+GF+ +
Sbjct: 287 AVVGYTNAGKSSIINRLTGSKELV-ENALFATLDTAVRKSLTKDGRAYTLVDTVGFVRRL 345
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E FK TLE+ AD+I+HVVD S+PD + Q + V+E L ++ E I + ++
Sbjct: 346 PTQLVEAFKSTLEEVGNADVILHVVDGSHPDPVSQIEAVNEVLAQIDGVEDIAQ--IIAF 403
Query: 400 NKVDAV--PPGERVTEEY--DLLISATRGTGLAQLKEKVQDMI 438
NK D + P R+ Y L++SA GT + +L+ ++++++
Sbjct: 404 NKSDVMQEPMRLRLQSLYPDSLIVSAASGTNIDRLRTRIENLL 446
>gi|415715615|ref|ZP_11466038.1| GTP-binding protein [Gardnerella vaginalis 1400E]
gi|388058062|gb|EIK80860.1| GTP-binding protein [Gardnerella vaginalis 1400E]
Length = 505
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 177/343 (51%), Gaps = 26/343 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLH 174
A ++ G V D + D ++ G G EL + DA V D L
Sbjct: 110 AALAKTAGAVVCDGMLQQRYRPDAATYVGSGKARELAAVVAQNDADTIVVD---DDLPPS 166
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--- 231
Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 167 QRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQLQYMLPRLRGWGAALSRQA 226
Query: 232 --------MNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++G ++K R + R KL+ + ++ RE R ++RQ PTV
Sbjct: 227 GGRAAGDAGIGSRGPGETKIEMDRRAIRNRISKLRHDIEQMAPTRETKRGSRRRQDIPTV 286
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GK+++I LT LV N LFATLD + + + VDT+GF+ +
Sbjct: 287 AVVGYTNAGKSSIINRLTGSKELV-ENALFATLDTAVRKSLTKDGRAYTLVDTVGFVRRL 345
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E FK TLE+ AD+I+HVVD S+PD + Q + V+E L ++ E I + ++
Sbjct: 346 PTQLVEAFKSTLEEVGNADVILHVVDGSHPDPVSQIEAVNEVLAQIDGVEDIAQ--IIAF 403
Query: 400 NKVDAV--PPGERVTEEY--DLLISATRGTGLAQLKEKVQDMI 438
NK D + P R+ Y L++SA GT + +L+ ++++++
Sbjct: 404 NKSDVMQEPMRLRLQSLYPDSLIVSAASGTNIDRLRTRIENLL 446
>gi|415720553|ref|ZP_11468028.1| GTP-binding protein [Gardnerella vaginalis 00703Bmash]
gi|388061724|gb|EIK84368.1| GTP-binding protein [Gardnerella vaginalis 00703Bmash]
Length = 505
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 203/405 (50%), Gaps = 40/405 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLH 174
A ++ G V D + D ++ G G EL + DA V D L
Sbjct: 110 AALAKTAGAVVCDGMLQQRYRPDAATYVGSGKARELAAVVAQNDADTIVVD---DDLPPS 166
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--- 231
Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 167 QRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQLQYMLPRLRGWGAALSRQA 226
Query: 232 --------MNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++G ++K R + R KL+ + + RE R ++RQ PTV
Sbjct: 227 GGRAAGDAGIGSRGPGETKIEMDRRAIRNRISKLRHDIALMAPTRETKRGSRRRQDIPTV 286
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GK+++I LT LV N LFATLD + + + VDT+GF+ +
Sbjct: 287 AVVGYTNAGKSSIINRLTGSKELV-ENALFATLDTAVRKSLTKDGRAYTLVDTVGFVRRL 345
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E FK TLE+ AD+I+HVVD S+PD + Q + V+E L ++ E I + ++
Sbjct: 346 PTQLVEAFKSTLEEVGQADVILHVVDGSHPDPVSQIEAVNEVLAQIDGVEDIAQ--IIAF 403
Query: 400 NKVDAV--PPGERVTEEY--DLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGG 455
NK D + P R+ Y L++SA GT + +L+ ++++++ ++ ++VR
Sbjct: 404 NKSDVMQEPMRLRLQSLYPDSLIVSAASGTNIDRLRTRIENLLPS----PHVHVKVRLPY 459
Query: 456 SEYQWLMKHTAVSNIREDDT--SAEH----LLLDVVMTDVIMNKF 494
S+Y + +S +RE+ SAE+ + LD + D + K
Sbjct: 460 SDYSGSL----LSKVRENGIVKSAEYKDSGIELDAFVGDSLAAKL 500
>gi|225388053|ref|ZP_03757777.1| hypothetical protein CLOSTASPAR_01787 [Clostridium asparagiforme
DSM 15981]
gi|225045906|gb|EEG56152.1| hypothetical protein CLOSTASPAR_01787 [Clostridium asparagiforme
DSM 15981]
Length = 427
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 169/329 (51%), Gaps = 27/329 (8%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G VD I + ++ GKG +E +K V + T V V D L Q K L+
Sbjct: 42 GAVTVDKVIQNREKVHPGTYLGKGKIEEVKDLV-WELDATGV-VCDDELSPAQLKNLEAA 99
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNI 234
V DR M+++ IF + A TRE ++Q+ +A+L Y R R
Sbjct: 100 LDTKVMDRTMVILDIFASRAHTREGKIQVELAQLKYRAARLVGMRASLSRLGGGIGTRGP 159
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ L+ R ++ ER +LK L +K RE+ R ++++ + A+VGYTN GK+TL+
Sbjct: 160 GEKKLEVDRRLIHERIGQLKAELEDVKRHREVTRQQREQGCAVSAAIVGYTNAGKSTLLN 219
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LTD D ++ ++LFATLD TT LP +IL DT+GFI +P L+E FK TLE+A
Sbjct: 220 HLTDAD-ILAEDKLFATLDPTTRSFTLPGDQQILLTDTVGFIRKLPHHLIEAFKSTLEEA 278
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD----AVPPGER 410
+DII+HVVD SNP Q V ETL+ LE+ +K V+ V NK D V GE
Sbjct: 279 KYSDIILHVVDCSNPQMDMQMHVVRETLKDLEIVDKT---VVTVFNKTDRLRAMVESGEA 335
Query: 411 ---------VTEEYDLLISATRGTGLAQL 430
+ +Y + ISA G GL +L
Sbjct: 336 GPLAQLPRDFSADYQVRISAKTGEGLDEL 364
>gi|226325449|ref|ZP_03800967.1| hypothetical protein COPCOM_03254 [Coprococcus comes ATCC 27758]
gi|225206192|gb|EEG88546.1| GTP-binding protein HflX [Coprococcus comes ATCC 27758]
Length = 414
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 169/311 (54%), Gaps = 21/311 (6%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG +E + R++ + T + V D L Q L D+ V V DR M+++ IF
Sbjct: 60 TYVGKGKIEEI-RELLWELDATGI-VCDDELSPAQMNNLTDILDVKVMDRTMVILDIFAG 117
Query: 201 HAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQK 252
A T E ++Q+ +A+L Y ++ R + L+ R ++ R +
Sbjct: 118 RASTSEGKIQVELAQLKYRQSQLTGAGRAMSRLGGGIGTRGPGEKKLEMDRRLIKNRIAQ 177
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
L + L ++K RE+ R ++ + + P VA+VGYTN GK+TL+ LT ++ +QLFATL
Sbjct: 178 LNRELREVKRHRELTREQRTKNRIPVVAIVGYTNAGKSTLLNTLTGA-GVLQEDQLFATL 236
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT LP+ IL DT+GFI +P L++ FK TLE+A AD+I+HVVD SNP
Sbjct: 237 DPTTRSRKLPSGQEILLTDTVGFIRKLPHHLIDAFKSTLEEAKYADLILHVVDASNPQMD 296
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT-----EEYDLLISATRGTGL 427
+Q V ETLQ LE +K V+ NK+D + GE +T + + +SA G GL
Sbjct: 297 EQMYVVYETLQRLEAMDK---PVVTAFNKMDRI--GESLTVRDFKADRIVQVSAKTGEGL 351
Query: 428 AQLKEKVQDMI 438
L + +++++
Sbjct: 352 EALLQAIEEIL 362
>gi|331092167|ref|ZP_08340997.1| GTP-binding protein HflX [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401939|gb|EGG81513.1| GTP-binding protein HflX [Lachnospiraceae bacterium 2_1_46FAA]
Length = 415
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 166/310 (53%), Gaps = 19/310 (6%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG ++ +K ++ + T + D L Q LQD V DR +I++ IF
Sbjct: 60 TYVGKGKIDEIK-ELLWETEATGIICD-DELSPAQLGNLQDALDTKVMDRTLIILDIFAE 117
Query: 201 HAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQK 252
A T E ++Q+ +A+L Y +R R + L+ R ++ R +
Sbjct: 118 RASTSEGKIQVELAQLKYRQSRLVGLGKSLSRLGGGIGTRGPGEKKLEMDRRLIKGRIAQ 177
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
L + L ++K RE+ R ++ R P VA+VGYTN GK+TL+ LT S++ ++LFATL
Sbjct: 178 LNRELKEVKRHREVTREQRNRNHLPVVAIVGYTNAGKSTLLNKLTGA-SVLEEDKLFATL 236
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT L ++ IL DT+GFI +P L+E FK TLE+A ADII+HVVD SNP
Sbjct: 237 DPTTRGLKLQSKQEILLTDTVGFIRKLPHHLIEAFKSTLEEAKYADIILHVVDASNPQLD 296
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTE----EYDLLISATRGTGLA 428
+Q V ETLQ LE+ K ++ NK D GE + +Y + ISA G GL+
Sbjct: 297 EQMHIVYETLQQLEVVNK---PIITAFNKQDK-ADGEMIIRDFKADYIVKISAKTGEGLS 352
Query: 429 QLKEKVQDMI 438
L E +++++
Sbjct: 353 GLLETIEEVL 362
>gi|407781505|ref|ZP_11128723.1| putative GTP-binding protein (HflX-like) [Oceanibaculum indicum
P24]
gi|407207722|gb|EKE77653.1| putative GTP-binding protein (HflX-like) [Oceanibaculum indicum
P24]
Length = 456
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 122/379 (32%), Positives = 199/379 (52%), Gaps = 32/379 (8%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
+V S ++ + + G G +E + DA V V L QQ+ L+ +
Sbjct: 68 IVHSEVVRVSRATPATLMGSGQVERFADVI--DAMEIEVAVIDTALSPVQQRNLERSLKC 125
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN-----------I 234
V DR ++++IF A A+T E RLQ+ +A L Y R R + T++
Sbjct: 126 KVIDRTALILEIFGARARTHEGRLQVELAALTY--QRSRLVRSWTHLERQRGGAGFMGGP 183
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ ++ R ++ ++ KLK+ L+++K RE+ R+ +++ +P VA+VGYTN GK+TL
Sbjct: 184 GESQIELDRRIIDDKIVKLKRQLDEVKRTRELHRSARRKVPYPIVALVGYTNAGKSTLFN 243
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
+T ++ ++ LFATLD T LP+ +I+ DT+GFIS++PT L+ F+ TLE+
Sbjct: 244 RMTRS-AVFAKDLLFATLDPTMRRLSLPSGRQIILSDTVGFISDLPTQLVAAFRATLEEV 302
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLEL-EEKILEHVLVVGNKVDAVPPGERVT- 412
+ ADII+HV DV++PD Q+ V+ L L + E+ ++ V NKVD +P +R
Sbjct: 303 LEADIILHVRDVAHPDSAAQRADVEAVLADLGIAPEESDTPIIEVLNKVDLLPEEDRAQV 362
Query: 413 ------EEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVR---SGGSEYQWLMK 463
+ + +SA G+G +L + D L A R+ + +RV S G+ WL +
Sbjct: 363 LNLAARDPDKVAVSALEGSGTDELL-TLLDQRLNA--RREL-LRVDVDLSDGATLAWLYR 418
Query: 464 HTAVSNIREDDTSAEHLLL 482
H V REDD HLL+
Sbjct: 419 HGEVLE-REDDEKHSHLLV 436
>gi|356499317|ref|XP_003518488.1| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like
[Glycine max]
Length = 594
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 163/295 (55%), Gaps = 34/295 (11%)
Query: 141 SFFGKGNLELLKRQVRGDAR----VTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQ 196
++FG+G ++ +K + A V AVFV+ +L QQ+ L+ + PV DR ++I+
Sbjct: 127 TYFGRGTVDNIKVHIDAAAESKGDVDAVFVNA-ILSGIQQRNLEMAWGKPVLDRVGLIIE 185
Query: 197 IFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI--------------TKGFLDS- 241
IF AHA T+EA+LQ +A L Y TR I N +GF+
Sbjct: 186 IFNAHAFTKEAKLQAELAALSYKKTRLVRIRGPDGRNTFGASGEAEVWRGSGGQGFMSGA 245
Query: 242 -------KRMVLMEREQKLKKALNKLKGQREMMRNKKQR------QKFPTVAVVGYTNCG 288
+R ++ER L + +++ R + R ++R + TVAVVGYTN G
Sbjct: 246 GETELQLQRRRILERRNYLLSQIEEVRRTRALQRAGRKRRGGSSGEGLATVAVVGYTNAG 305
Query: 289 KTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFK 348
K+TL+ L+D D L +LFAT+D +LP+ ++L+ DT+GFIS++P L+E F+
Sbjct: 306 KSTLVSRLSDSD-LYSDCRLFATVDPRVRSAVLPSGKKVLFSDTVGFISDLPVQLVEAFQ 364
Query: 349 VTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
TLE+ + AD+++HVVD S P+ + + V + LQ + + E+ L++++ V NK+D
Sbjct: 365 ATLEEVVEADLLVHVVDSSAPNLDEHRSTVFQVLQQIGVSEEKLQNMIEVWNKID 419
>gi|294508447|ref|YP_003572505.1| GTP-binding protein hflX [Salinibacter ruber M8]
gi|294344775|emb|CBH25553.1| GTP-binding protein hflX [Salinibacter ruber M8]
Length = 455
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 180/331 (54%), Gaps = 25/331 (7%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V D SL S +F G G ++ L R + R + + + D L Q K ++
Sbjct: 44 GADVTDRLTQSLNSPSPATFIGSGKVKELARLTK--ERDSDLVIFDDELSPVQVKNIEKK 101
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSK 242
+ DR +++ IF + A+TR A+ Q+ +A+L YL R R T+++ +G + +K
Sbjct: 102 IDCKLLDRTGLILDIFASRAQTRAAKTQVELAQLGYL--RSRLTRRWTHLSRQEGGIGTK 159
Query: 243 ----------RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTL 292
R ++ +R KL++ L+++ QR R K R+ + T ++VGYTN GK+TL
Sbjct: 160 GPGEKQIEMDRRIIDKRMAKLREKLDEIDRQRTTQR--KGREGYTTASLVGYTNAGKSTL 217
Query: 293 IKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLE 352
+ AL D+D L ++LFATLD TT L + +L DT+GFI +P L+E F+ TL+
Sbjct: 218 LNALADED-LEAEDRLFATLDATTRTVELDSNKEVLMSDTVGFIRKLPHRLIESFRSTLD 276
Query: 353 DAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT 412
+ +D++IHVVDV++P+Y +Q + V ETL LE +K LVV NK+DA+ +
Sbjct: 277 EVRESDVLIHVVDVTHPNYEEQMRVVAETLGELEARDK---PTLVVFNKIDAMEDRTLLR 333
Query: 413 EEYD-----LLISATRGTGLAQLKEKVQDMI 438
+ SA RG GL LKE + D+I
Sbjct: 334 RLRRNHPDAVFASALRGIGLETLKEDLLDLI 364
>gi|256832283|ref|YP_003161010.1| GTP-binding proten HflX [Jonesia denitrificans DSM 20603]
gi|256685814|gb|ACV08707.1| GTP-binding proten HflX [Jonesia denitrificans DSM 20603]
Length = 509
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 181/350 (51%), Gaps = 30/350 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G +V+D + + D ++ G G L V+ +V A V VD L
Sbjct: 112 AALAETAGSQVLDGLLQRRATPDPGTYLGSGKASELADIVQ---QVGADTVIVDGELGPS 168
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRT--------- 225
Q++ L+D+ ++ V DR +++ IF HAK+RE + Q+ +A+L YL R R
Sbjct: 169 QRRALEDIIKIKVIDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQA 228
Query: 226 ---IEDATNMNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
+ A ++G ++K R + R KL++ + +K RE R+ +++ P
Sbjct: 229 GGQVGSAGAGMGSRGPGETKIELDRRRIRTRMAKLRREIAAMKPAREAKRSSRRKNAVPA 288
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+VGYTN GK++L+ ALT LV +N LFATLD T P+ DT+GF+ +
Sbjct: 289 VAIVGYTNAGKSSLLNALTGAGVLV-QNALFATLDPTVRRTKTPDGRVYTLADTVGFVRH 347
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+P L+E F+ TLE+ ADII+HVVD ++PD Q V L ++ I E ++V
Sbjct: 348 LPHQLVEAFRSTLEETADADIIVHVVDGAHPDPAGQIAAVRTVLADIDGVSDIPE--IIV 405
Query: 399 GNKVDAVPPGERVTE----EYDL-LISATRGTGLAQLKEKVQDMILKATG 443
NK D PP E + + E D+ +SA G G+ +L + D IL A G
Sbjct: 406 VNKADIAPP-EAIAQIRSMERDVWAVSAHTGAGIEELLGHIAD-ILPAPG 453
>gi|114775684|ref|ZP_01451252.1| GTPase [Mariprofundus ferrooxydans PV-1]
gi|114553795|gb|EAU56176.1| GTPase [Mariprofundus ferrooxydans PV-1]
Length = 433
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 125/379 (32%), Positives = 188/379 (49%), Gaps = 23/379 (6%)
Query: 112 AESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD-V 170
AE L+ +V S +S+ + G+G +E + RQV + A V VD
Sbjct: 35 AEEFDLLVGAAACEIVASQRLSVRKAAAATLLGQGQVEEIARQVE---ILEADVVFVDHP 91
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT-- 221
L QQ+ L+ + V DR ++++IF A A+TRE LQ+ +A L Y WT
Sbjct: 92 LSPVQQRNLETAWNAKVVDRTGLILEIFAARARTREGVLQVELASLNYQLGRLVRSWTHL 151
Query: 222 -RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
R R + +RM+ L++ L K+K R R+ +QR+ PTVA
Sbjct: 152 ERQRGGFGFMGGPGERQIELDRRMI-RNSIGALERDLAKVKRMRATQRSGRQRKDIPTVA 210
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+VGYTN GK+TL LT D V NQLFATLD T LP LR++ DT+GF+ +P
Sbjct: 211 LVGYTNAGKSTLFNRLTTSDVFVA-NQLFATLDPTLRLLELPGGLRLMLSDTVGFVQELP 269
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
L++ F+ TLE+ + AD+I+HV D S+P + + V +TLQ L + V+ + N
Sbjct: 270 HELVDAFRATLEEVIEADLILHVRDASDPMQAEHAKVVHDTLQQLGVVGDGAPQVVEILN 329
Query: 401 KVDAVPP-----GERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGG 455
K D VP GE +T L ISA G GL +L + + + + ++ + + S G
Sbjct: 330 KKDRVPELASFHGEGITTSR-LAISALTGEGLDELTDLLGSWLQRDMHELHLRLAI-SDG 387
Query: 456 SEYQWLMKHTAVSNIREDD 474
+ H ++ + R DD
Sbjct: 388 RSLAYCHAHGSILSSRADD 406
>gi|225351437|ref|ZP_03742460.1| hypothetical protein BIFPSEUDO_03032 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225157781|gb|EEG71064.1| hypothetical protein BIFPSEUDO_03032 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 496
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 177/363 (48%), Gaps = 29/363 (7%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR 156
W + + L E AL + G V D + + D ++ G G L V
Sbjct: 84 WSSRETTQAQAEESLRELAALAETA-GAVVCDGLLQHRIKPDAATYVGSGKARELAGIVA 142
Query: 157 GDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAEL 216
+ T V D L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L
Sbjct: 143 QEEADT--IVVDDDLPPSQRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQL 200
Query: 217 PYLWTRYR-----------TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNKLK 261
Y+ R R ++G ++K R V+ R KL+K + ++
Sbjct: 201 QYMLPRLRGWGGSLSRQAGGRAAGDAGIGSRGPGETKIEMDRRVIRSRIAKLRKQIEQMA 260
Query: 262 GQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGML 321
R++ R ++R PTVAVVGYTN GK++L LT LV N LFATLD
Sbjct: 261 PARDVKRGARRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRARA 319
Query: 322 PNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDET 381
+ + YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q VD+
Sbjct: 320 KDGRQYAYVDTVGFVRRLPTQLIEAFKSTLEEVSEADLIVHVVDGSHPDPFSQIDAVDDV 379
Query: 382 LQHLELEEKILEHVLVVGNKVDAVPPGER------VTEEYDLLISATRGTGLAQLKEKVQ 435
L ++ E I ++V NK D + R + E Y ++SA G G+ +L+ +V+
Sbjct: 380 LSDIDGVETI--PTIIVFNKADRMDEATRERIEALMPEAY--IVSAFSGEGVDELRMQVE 435
Query: 436 DMI 438
M+
Sbjct: 436 SML 438
>gi|210617942|ref|ZP_03291828.1| hypothetical protein CLONEX_04060 [Clostridium nexile DSM 1787]
gi|210149081|gb|EEA80090.1| hypothetical protein CLONEX_04060 [Clostridium nexile DSM 1787]
Length = 416
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 174/333 (52%), Gaps = 19/333 (5%)
Query: 118 VSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQK 177
++S G V + +L ++ GKG L+ +K + + T + D L Q
Sbjct: 37 LASTAGAVTVGRVVQNLSQIHPVTYVGKGKLDEIK-DLLWETEATGIICD-DELSPIQLG 94
Query: 178 MLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDA 229
++D + DR +I++ IF A T E ++Q+ +A+L Y +R R
Sbjct: 95 NMEDALNTKIMDRTLIILDIFANRASTNEGKIQVELAQLKYRQSRLVGLGKSLSRLGGGI 154
Query: 230 TNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGK 289
+ L+ R ++ R +L + L +K RE+ R ++ R + P +A+VGYTN GK
Sbjct: 155 GTRGPGEKKLEMDRRLIKGRIAQLNRELKDVKRHREVTREQRSRNQVPVIAIVGYTNAGK 214
Query: 290 TTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKV 349
+TL+ LT D L ++LFATLD TT LP++ +L DT+GFI +P L+E FK
Sbjct: 215 STLLNTLTGADVL-EEDKLFATLDPTTRNLKLPSKQEVLLTDTVGFIRKLPHHLIEAFKS 273
Query: 350 TLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE 409
TLE+A ADII+HVVD SNP +Q V ETL +LE++ K V+ NK D V GE
Sbjct: 274 TLEEAKYADIILHVVDASNPQMDEQMYIVYETLMNLEVKNK---PVITAFNKQDKV-DGE 329
Query: 410 RVTEEYD----LLISATRGTGLAQLKEKVQDMI 438
+ ++ + ISA G GL L+ +++++
Sbjct: 330 VILRDFKADHVVNISAKTGEGLENLQNVIEEVL 362
>gi|119026136|ref|YP_909981.1| GTP-binding protein [Bifidobacterium adolescentis ATCC 15703]
gi|118765720|dbj|BAF39899.1| GTP-binding protein [Bifidobacterium adolescentis ATCC 15703]
Length = 498
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 174/361 (48%), Gaps = 25/361 (6%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR 156
W + + L E AL + G V D + + D ++ G G L V
Sbjct: 86 WSSRETTQAAAEESLRELAALAET-AGAVVCDGLLQHRIKPDAATYVGSGKARELAGIVA 144
Query: 157 GDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAEL 216
D T V D L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L
Sbjct: 145 QDEADT--IVVDDDLPPSQRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQL 202
Query: 217 PYLWTRYR-----------TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNKLK 261
Y+ R R ++G ++K R V+ R KL++ + ++
Sbjct: 203 EYMLPRLRGWGGSLSRQAGGRAAGDAGIGSRGPGETKIEMDRRVIRSRIAKLRRQIAQMA 262
Query: 262 GQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGML 321
R++ R ++R PTVAVVGYTN GK++L LT LV N LFATLD
Sbjct: 263 PARDVKRGARRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRAKA 321
Query: 322 PNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDET 381
+ YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q V++
Sbjct: 322 KDGRLYAYVDTVGFVRRLPTQLIEAFKSTLEEVADADLIVHVVDGSHPDPFSQIDAVNDV 381
Query: 382 LQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDL----LISATRGTGLAQLKEKVQDM 437
L ++ E I +V NK D + R E + ++SA G G+ L+EKV+ M
Sbjct: 382 LSDIDGVETI--PTIVAFNKADRMDEAARERVEALMPDAYIVSAFSGEGVEALREKVESM 439
Query: 438 I 438
+
Sbjct: 440 L 440
>gi|388454931|ref|ZP_10137226.1| GTPase [Fluoribacter dumoffii Tex-KL]
Length = 418
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 188/345 (54%), Gaps = 34/345 (9%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRG-DARVTAVFVSVDVLKLHQQKMLQDLFQ 184
++D + + + D K + GKG E + + V+ DA + V V+ + L Q++ L+ LF+
Sbjct: 41 ILDCVLGTRATPDAKYYIGKGKAEEIAQLVKALDAEL--VLVNHE-LSPSQERNLERLFE 97
Query: 185 VPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------ 238
V DR +++ IF A+T E +LQ+ +A+L +L TR + T++ KG
Sbjct: 98 CRVVDRSGLILDIFAQRARTFEGKLQVELAQLQHLSTRL--VRGWTHLERQKGGIGLRGP 155
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
L++ R +L ER + + K L K++G R+ R +++ TV++VGYTN GK+TL
Sbjct: 156 GETQLETDRRLLRERIKYINKRLEKVRGNRDQNRQARRKASLLTVSLVGYTNAGKSTLFN 215
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
ALT ++ V NQLFATLD T + LP ++ DT+GFI ++P L+E F+ TLE+
Sbjct: 216 ALTGENIYVA-NQLFATLDPTMRQLNLPGSSSVILTDTVGFIRDLPHQLVEAFRATLEET 274
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD----AVPPGER 410
AD+++HV+D+S+P + V++ L L + + V++V NK+D P +
Sbjct: 275 QQADLLLHVIDISDPHWRDNVFSVEQVLDELGVHDI---PVILVFNKIDLKEGYTPKADC 331
Query: 411 VTEEYDLLISATRGTGLAQLKEK----------VQDMILKATGRK 445
+ + ISA GL LKE ++D++L+AT K
Sbjct: 332 QEGKCKVWISAASNFGLDLLKETISSQLHGAILIEDVVLRATQAK 376
>gi|386395331|ref|ZP_10080109.1| GTP-binding protein HflX [Bradyrhizobium sp. WSM1253]
gi|385735957|gb|EIG56153.1| GTP-binding protein HflX [Bradyrhizobium sp. WSM1253]
Length = 460
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 213/440 (48%), Gaps = 42/440 (9%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWR------VVDSTIISLLSFDKK 140
+V V+ P+++ + +L +++A + G V D+ I +
Sbjct: 23 RVLVIGPYLRVRAGNADAQSEAHVLRDAEARLDEAAGLARAIDLVVADAIIAPISQIRPA 82
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
++ GKG +E + +G + V +D L QQ+ L+ Q V DR ++++IF
Sbjct: 83 TYIGKGKVEEIAALAKG---LDVELVVMDCALAPIQQRNLEKELQAKVLDRTGLILEIFG 139
Query: 200 AHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLME 248
AKT+E LQ+ +A L Y R R + T++ +G +++ R ++ E
Sbjct: 140 RRAKTKEGSLQVELAHLNY--QRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLIQE 197
Query: 249 REQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQL 308
R KL+ L K++ R + R +QR + VA+VGYTN GK+TL LT D + + L
Sbjct: 198 RISKLEGELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRAD-VQAADML 256
Query: 309 FATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSN 368
FATLD T LP+ + + DT+GFISN+PT L+ F+ TLE+ + AD+I+HV D+S+
Sbjct: 257 FATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEADVILHVRDISH 316
Query: 369 PDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP----------GERVTEEYDLL 418
D Q+ VD L+ L + ++ V NK+D P R + +L
Sbjct: 317 DDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKIDRYGPEQREELLNIAARRPEDHPAML 376
Query: 419 ISATRGTGLAQLKEKVQDMILKATGRKNITMRVR---SGGSEYQWLMKHTAVSNIREDDT 475
+SA G G+ L +++ + K IT+ + S G+ WL +++ V D
Sbjct: 377 VSAVSGEGVDALLAAIEERL----AAKRITLDLSIDASDGAGISWLHRNSEVLAKELHDG 432
Query: 476 SAEHLL-LDVVMTDVIMNKF 494
+ + +D D+++N+F
Sbjct: 433 RFDMTVRVDETKRDIVVNRF 452
>gi|225376604|ref|ZP_03753825.1| hypothetical protein ROSEINA2194_02246 [Roseburia inulinivorans DSM
16841]
gi|225211487|gb|EEG93841.1| hypothetical protein ROSEINA2194_02246 [Roseburia inulinivorans DSM
16841]
Length = 414
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/339 (33%), Positives = 182/339 (53%), Gaps = 18/339 (5%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
+AE LV + G VV + I ++ G G + LK V + T + V D
Sbjct: 31 VAELAELVKT-AGATVVGTMIQKRELIHPGTYIGSGKVAELKLLVE-ELGATGI-VCDDE 87
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY------- 223
L Q + L+D+ V DR +I++ IF A A T E ++Q+ +A+L Y +R
Sbjct: 88 LSPAQLRNLEDMLDTKVMDRTLIILDIFAARATTSEGKIQVELAQLKYRLSRLTGLGRSM 147
Query: 224 -RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
R + L+ R ++ +R +L + L +++ R++ R ++++ + P A+V
Sbjct: 148 SRLGGGIGTRGPGEKKLEIDRRLIKDRIAQLNRELKEVRQHRDITRAQREKNQMPVAAIV 207
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TLI LT+ ++ ++LFATLD TT L + +IL DT+GFI +P
Sbjct: 208 GYTNAGKSTLINTLTNA-GVLEEDKLFATLDPTTRVLELSGQQQILVTDTVGFIRKLPHH 266
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+E FK TLE+A AD I+HVVD SNP + +Q V ETL +L++++K V+ + NK
Sbjct: 267 LIEAFKSTLEEAKYADYILHVVDASNPQHEKQMLIVYETLANLDVKDKT---VITLFNKQ 323
Query: 403 DA---VPPGERVTEEYDLLISATRGTGLAQLKEKVQDMI 438
DA P ++ L ISA GTGL +LK + +++
Sbjct: 324 DARMDSEPLHDFKADHTLPISAKNGTGLEELKNLLSELL 362
>gi|158424703|ref|YP_001525995.1| GTP-binding protein [Azorhizobium caulinodans ORS 571]
gi|158331592|dbj|BAF89077.1| GTP-binding protein [Azorhizobium caulinodans ORS 571]
Length = 459
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 229/466 (49%), Gaps = 39/466 (8%)
Query: 69 EFKTIRDEAQTGALGTDH-----QVFVVQPFI-KWGKKMKRNT-TRDFMLAESKALVSSI 121
E K R A G G D + V+ P + K G + + + + L E+ L ++I
Sbjct: 2 ELKGPRGAAGGGLKGVDRHAPPTRCAVITPQVTKRGARAGADRRSPEARLEEAVGLAAAI 61
Query: 122 QGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQD 181
VV ++ + ++ G G +E + V + V VFV L QQ+ L+
Sbjct: 62 D-LDVVYKGLVLISEVKPATYIGSGKVEEIAGIVAAE-EVGLVFVDA-ALSPVQQRNLEK 118
Query: 182 LFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF--- 238
+ V DR ++++IF + A+T+E LQ+ +A L Y R R + T++ +G
Sbjct: 119 AWSAKVVDRTALILEIFGSRARTKEGTLQVELAHLNY--QRSRLVRSWTHLERQRGGFGF 176
Query: 239 --------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKT 290
+++ R + ER ++++ L ++K R + R ++R +P VA+VGYTN GK+
Sbjct: 177 LGGPGETQIEADRRQIGERIIRIERELEQVKRTRALHRTSRKRVPYPVVALVGYTNAGKS 236
Query: 291 TLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVT 350
TL LT + + ++ LFATLD T LP+ R++ DT+GFIS +PT L+ F+ T
Sbjct: 237 TLFNRLTQAEVMA-QDLLFATLDPTLRAVDLPHGTRVILSDTVGFISELPTQLVAAFRAT 295
Query: 351 LEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER 410
LE+ + AD+I+HV D+S+PD Q V + L L ++ + ++ V NK+D +P ER
Sbjct: 296 LEEVIEADVILHVRDISHPDTDAQAADVKDVLTELGIDVEAGGRLVEVWNKIDILPEAER 355
Query: 411 ----------VTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQW 460
E L+SA G G L ++++ + ++T+ G W
Sbjct: 356 EQLLNTAARAEPEARPELVSALTGEGAPALLDRIEAHVTAGRTLLSVTLAAED-GEGLGW 414
Query: 461 LMKHTAVSNIREDDTSAE-HLLLDVVMTDVIMNKFKHEFISSRKRG 505
L +H + E ++ A+ H+++ + + ++ K F +++ RG
Sbjct: 415 LYRH---GEVLERESGADGHVVVSLRILPERVDLVKRRFGAAQVRG 457
>gi|284044712|ref|YP_003395052.1| GTP-binding proten HflX [Conexibacter woesei DSM 14684]
gi|283948933|gb|ADB51677.1| GTP-binding proten HflX [Conexibacter woesei DSM 14684]
Length = 450
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 190/375 (50%), Gaps = 50/375 (13%)
Query: 99 KKMKRNTTRDFMLA--ESKALVSSIQ------GWRVVDSTIISLLSFDKKSFFGKGNLEL 150
+ + R R FM+A ES +S +Q G VV T+ ++ G+G LE
Sbjct: 20 QPVGRARQRAFMIAALESGDDLSELQELLRTAGVAVVGQTVQHRERPHPNTYLGEGKLEE 79
Query: 151 LKRQVR-GDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARL 209
L+ ++ DA V AV D L Q++ L+ PV DR I++ IF HA + E +L
Sbjct: 80 LRALLKEADANVVAVD---DELSPRQERNLERALDTPVIDRTSIILDIFAGHAHSAEGKL 136
Query: 210 QIAIAELPY-------LWTRYRTIEDATNMNIT----------KGFLDSKRMVLMEREQK 252
Q+ +A+L Y LWT + + +++ R + +R
Sbjct: 137 QVELAQLQYNLARMRGLWTHLERLGAGAGGPGGGPGIGTRGPGESQIETDRRLARDRITA 196
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
L++ L ++KG RE MR ++ R + PTVA+VGYTN GK+TL+ LT + V R++LF TL
Sbjct: 197 LRRRLERVKGSRETMRAERDRARLPTVALVGYTNAGKSTLLNRLTGAEVGV-RDRLFHTL 255
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT L R L DT+GFI +P L+E F TLE+ LAD+++HVVD S P+
Sbjct: 256 DPTTRSYKLGGR-DYLLTDTVGFIRKLPHQLVEAFGATLEETRLADLLLHVVDASAPE-- 312
Query: 373 QQKQHVDETLQHLELEEKILEHV-------LVVGNKVDAVPPGER----VTEEYDLLISA 421
+ +DE ++ + + +L + L++ NK DA+ +R + +LISA
Sbjct: 313 ---EELDEMMRAV---DSVLGDIGAGDQPRLLILNKADALDDDQRHEVQLRHPDGMLISA 366
Query: 422 TRGTGLAQLKEKVQD 436
G GL L E++++
Sbjct: 367 ATGEGLDALGERIEE 381
>gi|384261623|ref|YP_005416809.1| Small GTP-binding protein domain [Rhodospirillum photometricum DSM
122]
gi|378402723|emb|CCG07839.1| Small GTP-binding protein domain [Rhodospirillum photometricum DSM
122]
Length = 438
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 37/415 (8%)
Query: 90 VVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLE 149
V+ P ++ G R+ L E+K L ++I VV + ++ L + G G +E
Sbjct: 17 VLHPSLRKGPAKARSPQD--CLEEAKGLATAIT-LDVVLAEVVPLTRRVPATCLGGGAVE 73
Query: 150 LLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREAR 208
+K +V R + V VD L QQ+ L+ + V DR ++++IF A+T E +
Sbjct: 74 RIKEEVE---RESIALVVVDTQLTPIQQRNLEREWACKVIDRTGLILEIFGERARTAEGK 130
Query: 209 LQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKAL 257
LQ+ +A L Y R R + T++ +G ++ R ++ +R +LK+ L
Sbjct: 131 LQVELAHLTY--QRSRLVRSWTHLERQRGGSGFLGGPGETQIELDRRLIDDRIVRLKREL 188
Query: 258 NKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTH 317
+++ R + R ++R +P VA+VGYTN GK+TL LT L ++ LFATLD T
Sbjct: 189 EEVRRTRGLHREARKRVPYPVVALVGYTNAGKSTLFNQLTAGGVLA-KDMLFATLDPTMR 247
Query: 318 EGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQH 377
LP+ +++ DT+GF+S++P L+ F+ TLE+ AD+I+HV D++ D QK
Sbjct: 248 ALDLPSGRKVILSDTVGFVSDLPHELVAAFRATLEEVQAADVIVHVRDIAGLDTEAQKAD 307
Query: 378 VDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDL-------LISATRGTGLAQL 430
V++ L+ ++LEE+ L NK D + P ER E DL ++SA G GL +L
Sbjct: 308 VEDVLRGMDLEER---QPLEALNKADCLDPEERARLEEDLAPDSDQVMLSALTGEGLDRL 364
Query: 431 KEKVQDMILKATGRKNITMRVR-SGGSEYQWLMKHTAVSNIREDDTSAEHLLLDV 484
++ + A R + +R+ G+ WL + V R+D+ +H +L V
Sbjct: 365 LARIDARL--ALARLVLEVRLPLEDGATLAWLYRKGEVLERRDDE---DHCVLTV 414
>gi|422328084|ref|ZP_16409111.1| GTP-binding protein HflX [Erysipelotrichaceae bacterium 6_1_45]
gi|371661867|gb|EHO27085.1| GTP-binding protein HflX [Erysipelotrichaceae bacterium 6_1_45]
Length = 417
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 196/388 (50%), Gaps = 24/388 (6%)
Query: 133 SLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYM 192
+L S +++ G G E + ++ + + V + D+ L Q + L+++ Q PV DR
Sbjct: 39 NLKSITLRTYIGTGKCEEIHAYLQ-EQEIQRVVFNHDLSPL-QIRNLEEILQTPVMDRTE 96
Query: 193 IVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRM 244
+++ IF++ A TR ARLQI A+L L R R N + L+ R
Sbjct: 97 LILAIFESRAVTRTARLQIECAQLKKLLPRLIGANTQLGRQSGSGKNKGAGEKQLELDRR 156
Query: 245 VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKAL-------T 297
+ R Q+L++ L K++ QR R +Q+ P V++VGYTN GK+T++ L
Sbjct: 157 RINARIQELQRELKKIEAQRFNQRRARQKSMLPLVSLVGYTNAGKSTIMNMLLEHSSPYE 216
Query: 298 DDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLA 357
+D ++ ++ LFATLD + LP+ L DT+GF+SN+P L+E F TLE+ A
Sbjct: 217 EDKKVLEKDMLFATLDTSIRHIDLPDGKSFLLSDTVGFVSNLPHDLVEAFHSTLEEVQYA 276
Query: 358 DIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDL 417
+++ VVDVS+ +Y +Q + ETLQ ++ + + + V NK D +DL
Sbjct: 277 SLLVQVVDVSSEEYARQMEITQETLQQIKAADIPM---ITVYNKCDQSGYQYPQVHAHDL 333
Query: 418 LISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSA 477
+SA GL +L + + + + + + G Y LMKH V + R D+
Sbjct: 334 YMSAREKAGLQELLDLIHSHLYPDEKHVELHIPYQQTGI-YSLLMKHAHVIS-RRDEEDG 391
Query: 478 EHLLLDVVMTDVIMNKFKHEFISSRKRG 505
H LD V++D + K+++ IS ++ G
Sbjct: 392 IH--LDAVLSDTLYQKYRNYIISLKEEG 417
>gi|304321928|ref|YP_003855571.1| GTP-binding protein HFLX [Parvularcula bermudensis HTCC2503]
gi|303300830|gb|ADM10429.1| GTP-binding protein HFLX [Parvularcula bermudensis HTCC2503]
Length = 469
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 218/450 (48%), Gaps = 48/450 (10%)
Query: 83 GTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSF 142
G+ H V+ P W + + T L E L ++I G +V D+ + L ++
Sbjct: 12 GSLHHAIVIHP--DWSRAGTVSRTASQRLDEVVGLTAAI-GLKVTDALGVGLQDIRPATY 68
Query: 143 FGKGNLELLKRQV-RGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAH 201
FG G ++ + + D V V+ + + Q + L+ +Q V DR ++++IF
Sbjct: 69 FGTGKVKEIGELIDNADPSPGLVVVNTQLTPV-QHRNLERAWQAKVLDRTALILEIFGER 127
Query: 202 AKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMERE 250
A+T+E RLQ+ +A L Y R R + T++ +G +++ R VL +
Sbjct: 128 AQTKEGRLQVDLAHLTY--QRSRLVRSWTHLERQRGGAGFLGGPGERQIEADRRVLAGKI 185
Query: 251 QKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFA 310
+LK L +++ R + R K++R P +A+VGYTN GK++L +T + ++ LFA
Sbjct: 186 DRLKAQLEQVRRTRTLQRAKRKRAPHPVIALVGYTNAGKSSLFNRMTGA-GVTAQDLLFA 244
Query: 311 TLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPD 370
TLD T LP R + DT+GFIS++PT L+ F+ TLE+ + ADI++HV D+S+ +
Sbjct: 245 TLDPTMRAVDLPGVGRAILSDTVGFISDLPTDLVAAFRATLEEVLEADILLHVRDISHSE 304
Query: 371 YLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT-----------EEYDLL- 418
+ Q+ V L L ++E + V+ V NK+D + P ++ T E LL
Sbjct: 305 HEAQRLDVLSVLGELGIDEDSPQQVIEVWNKIDLLSPDDQHTAVLTAAHRSTFAEATLLS 364
Query: 419 -----ISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG---GSEYQWLMKHTAVSNI 470
+SA G GL L + ++ + VR G G+ WL H +I
Sbjct: 365 PLVSAVSAHSGEGLEGLFGAIDHLLTQ----DYTLFHVRLGPADGAADAWLHAH---GDI 417
Query: 471 REDDTSAE--HLLLDVVMTDVIMNKFKHEF 498
RE + E H ++ V +++ +F+ F
Sbjct: 418 REIVETGEVGHRVISVRLSEKSAGQFRSRF 447
>gi|291522706|emb|CBK80999.1| GTP-binding protein HflX [Coprococcus catus GD/7]
Length = 419
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 166/315 (52%), Gaps = 21/315 (6%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG LE L + + T + D L Q ++D+ + V DR ++++ IF
Sbjct: 60 TYLGKGKLEELAFLI-SETHATGIICD-DELSPAQMANMEDVLDIKVMDRTLLILDIFAQ 117
Query: 201 HAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQK 252
A TRE ++Q+ +A+L Y TR R + L+ R ++ ER +
Sbjct: 118 RATTREGKIQVELAQLRYRATRLVGMRNSLSRLGGGIGTRGPGEKKLEVDRRLIRERISQ 177
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
LK+ L +K RE+ R ++QR + P A+VGYTN GK+TL+ LT ++ ++LFATL
Sbjct: 178 LKRELEDVKRHREVARQQRQRNQIPVAAIVGYTNAGKSTLLNRLTGA-GVLEEDKLFATL 236
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT L + +L DT+GFI +P L++ F+ TLE+A ADI+IH+VD SNP
Sbjct: 237 DPTTRNLTLDDGQELLLTDTVGFIHKLPHHLVDAFRSTLEEAKYADILIHMVDASNPQAE 296
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTE------EYDLLISATRGTG 426
V ETL L++++K ++ V NK D + E + +Y + S +GTG
Sbjct: 297 MHMHVVYETLAALDIKDK---KIITVFNKTDLIRDQESLVSLKDFRADYTVTASVKQGTG 353
Query: 427 LAQLKEKVQDMILKA 441
L L VQ IL+A
Sbjct: 354 LDALLSTVQ-TILRA 367
>gi|170744002|ref|YP_001772657.1| GTP-binding proten HflX [Methylobacterium sp. 4-46]
gi|168198276|gb|ACA20223.1| GTP-binding proten HflX [Methylobacterium sp. 4-46]
Length = 474
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 222/463 (47%), Gaps = 35/463 (7%)
Query: 57 SDNSQDDLEESDEFKTIRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTR--DFMLAES 114
D D E + R G + + V+ P++ R TR + L E+
Sbjct: 7 GDTRLSDEARPGEARLQRMAEPEGTIAAATRTLVLGPYLTRRGDAARAPTRPPEARLDEA 66
Query: 115 KALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKL 173
L ++I VVD ++ + + ++ GKG +E + ++ + + V +D L
Sbjct: 67 VGLAAAID-LAVVDRLMLPVQAIRPSTYLGKGRVEEIAGRIAAE---SVRLVVMDCALSP 122
Query: 174 HQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN 233
QQ+ L+ + V V DR ++++IF A TRE LQ+ A L Y R R + T++
Sbjct: 123 VQQRNLEKAWGVKVIDRTGMILEIFGRRASTREGALQVEHAHLAY--QRSRLVRSWTHLE 180
Query: 234 ITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
+G +++ R ++ ER ++++ L + R + R ++R +P VA+V
Sbjct: 181 RQRGGFGFLGGPGETQIEADRRLIQERMTRIERELGTVTRTRGLHRQSRRRVPYPIVALV 240
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL LT+ + + + LFATLD T LP+ + DT+GFIS++PT
Sbjct: 241 GYTNAGKSTLFNRLTEAE-VRAEDMLFATLDPTARAIKLPHGETAILSDTVGFISDLPTM 299
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+ F+ TLED + ADI++HV D+++ D Q + V L L + + + ++ V NK
Sbjct: 300 LIAAFRATLEDVIEADILLHVRDMAHEDTQAQGEDVQAVLAELGIAPQA-DRIIEVWNKA 358
Query: 403 DAVPPGE--------RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG 454
D + P E R T +LISA G G L +++ I A R + + +
Sbjct: 359 DLLGPEERERLLNLSRQTGTRPVLISALTGEGTDALLARIEGRI--AESRASFALVLDPA 416
Query: 455 -GSEYQWLMKHTAVSNIREDDTSAEHLLLDVVM--TDVIMNKF 494
G+ WL ++ V + RED HL++ V ++N+F
Sbjct: 417 EGAGLHWLYENAEVLDRREDAGGRLHLVVRVAPEKEPRLLNRF 459
>gi|148273200|ref|YP_001222761.1| putative GTP-binding protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831130|emb|CAN02082.1| putative GTP-binding protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 521
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 181/355 (50%), Gaps = 42/355 (11%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D + + D ++FG+G E L+ V A V A V D L
Sbjct: 124 AALAETAGAVVLDGLLQRRPTPDPSTYFGRGKAEELRALV---AAVGADTVIADTELAPS 180
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R D+ +
Sbjct: 181 QRRALEDVVKVKVIDRTAVILDIFSQHAKSREGKAQVELAQLQYLLPRLRGWGDSMSRQA 240
Query: 235 ------------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
TK LD +R + R +L+K + +K R+ R + R
Sbjct: 241 GGQVGGAGAGMGSRGPGETKIELDRRR--INTRMARLRKQIAAMKPARDTKRANRDRNSV 298
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT-----THEGMLPNRLRILYVD 331
P+VA+VGYTN GK++L+ +T LV N LFATLD T T +G L D
Sbjct: 299 PSVAIVGYTNAGKSSLLNRVTKAGVLV-ENALFATLDATVRKTETDQGQL-----YTLAD 352
Query: 332 TIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKI 391
T+GF+ N+P L+E F+ TLE+ +D+++HVVD S+PD Q V E + ++ I
Sbjct: 353 TVGFVRNLPHQLVEAFRSTLEELADSDVLVHVVDASHPDPAAQLATVHEVIAEVDA-SSI 411
Query: 392 LEHVLVVGNKVDAVPPGERVT----EEYDLLISATRGTGLAQLKEKVQDMILKAT 442
E +VV NK D G+RV + +SA G G+ +L+ ++ +++ + T
Sbjct: 412 PE--IVVFNKSDLASDGDRVVLRGLAPQGVFVSARTGEGVEELRRRIAELLPQPT 464
>gi|260590124|ref|ZP_05856037.1| GTP-binding protein HflX [Blautia hansenii DSM 20583]
gi|331084381|ref|ZP_08333485.1| GTP-binding protein HflX [Lachnospiraceae bacterium 6_1_63FAA]
gi|260539636|gb|EEX20205.1| GTP-binding protein HflX [Blautia hansenii DSM 20583]
gi|330401645|gb|EGG81226.1| GTP-binding protein HflX [Lachnospiraceae bacterium 6_1_63FAA]
Length = 416
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 185/358 (51%), Gaps = 18/358 (5%)
Query: 92 QPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELL 151
+ I G + + N L E K LV + G V+ + I + + + G G L+ +
Sbjct: 11 EKVILVGVQTRENDDTKDSLEELKELVKT-AGAEVLGTVIQAREAVHPGYYVGTGKLDEI 69
Query: 152 KRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQI 211
+ + D V D L Q L+ Q + DR M+++ IF A A T E ++Q+
Sbjct: 70 RMML--DGYGATGIVCDDELSPSQINNLERELQCKIMDRTMVILDIFAARANTSEGKIQV 127
Query: 212 AIAELPYLWTRYRTIEDATN--------MNITKGFLDSKRMVLMEREQKLKKALNKLKGQ 263
+A+L Y R + ++ + + L+ R ++ R +LKK L ++K
Sbjct: 128 ELAQLRYRAARLTGLGNSMSRLGGGIGTRGPGEKKLEMDRRLIKLRISQLKKELEQVKRH 187
Query: 264 REMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPN 323
R+++R + R+ T A+VGYTN GK+TL+ LTD L ++LFATLD TT LP
Sbjct: 188 RQVLREGRSRENIMTAAIVGYTNAGKSTLLNTLTDAKVL-EEDKLFATLDPTTRILELPG 246
Query: 324 RLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQ 383
+ ++ DT+GFI +P L+E FK TLE+A AD IIHVVD+SNP +Q V ETLQ
Sbjct: 247 KQKLYLTDTVGFIRKLPHHLIEAFKSTLEEAKYADFIIHVVDISNPQREKQMFVVYETLQ 306
Query: 384 HLELEEKILEHVLVVGNKVDAVPPGERVTE---EYDLLISATRGTGLAQLKEKVQDMI 438
L +E+K ++ + NK D + E + + +Y + + G GL +LKE ++ ++
Sbjct: 307 ELGVEDK---KIVTLFNKQDKLQDAETIRDFKADYIVKTAIKTGQGLEELKEVLEKIL 361
>gi|444306956|ref|ZP_21142708.1| GTP-binding protein [Arthrobacter sp. SJCon]
gi|443480733|gb|ELT43676.1| GTP-binding protein [Arthrobacter sp. SJCon]
Length = 503
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 179/350 (51%), Gaps = 32/350 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D + D +F G G + LK V T + VD L
Sbjct: 107 AALAETAGSEVLDGLVQRRDKPDPGTFLGSGKAQELKDIVMSTGADTVI---VDAELAPS 163
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 164 QRRGLEDIVKVKVIDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQA 223
Query: 235 ------------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
TK LD +R + R KL++ + +K RE R ++R
Sbjct: 224 GGQVGGAAAGMGSRGPGETKIELDRRR--IRTRMAKLRREIAAMKPARETKRANRRRNAV 281
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P+VA+ GYTN GK++L+ LTD LV N LFATLD T + + L DT+GF+
Sbjct: 282 PSVAIAGYTNAGKSSLLNRLTDAGVLV-ENALFATLDPTVRKAETADGLGYTLADTVGFV 340
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++PT L+E F+ TLE+ AD+I+HVVD S+PD Q V + ++ KI E +
Sbjct: 341 RSLPTQLVEAFRSTLEEVADADLILHVVDASHPDPEGQIAAVRKVFSEVDA-RKIPE--I 397
Query: 397 VVGNKVDAVPP--GERVT--EEYDLLISATRGTGLAQLKEKVQDMILKAT 442
+V NK DA P ER+ E +++SA G G+A+L + + I + +
Sbjct: 398 IVLNKADAADPFVVERLKQREPRHVVVSARTGQGIAELLRVISESIPRPS 447
>gi|325962851|ref|YP_004240757.1| GTP-binding protein [Arthrobacter phenanthrenivorans Sphe3]
gi|323468938|gb|ADX72623.1| small GTP-binding protein domain/GTP-binding conserved hypothetical
protein TIGR00650 [Arthrobacter phenanthrenivorans
Sphe3]
Length = 527
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 179/348 (51%), Gaps = 28/348 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D + D +F G G + LK V T V VD L
Sbjct: 131 AALAETAGSEVLDGLVQRRDKPDPGTFLGSGKAQELKDIVMSTGADTVV---VDAELAPS 187
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRT--------- 225
Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R
Sbjct: 188 QRRGLEDIVKVKVIDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQA 247
Query: 226 ---IEDATNMNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
+ A ++G ++K R + R KL++ + +K RE R ++R + P+
Sbjct: 248 GGQVGSAAAGMGSRGPGETKIELDRRRIRTRMAKLRREIAAMKPARETKRANRRRNEVPS 307
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+ GYTN GK++L+ LTD LV N LFATLD T + + L DT+GF+ +
Sbjct: 308 VAIAGYTNAGKSSLLNRLTDAGVLV-ENALFATLDPTVRKAETADGLGYTLADTVGFVRS 366
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+PT L+E F+ TLE+ +D+I+HVVD S+PD Q V + ++ K+ E ++V
Sbjct: 367 LPTQLVEAFRSTLEEVADSDLILHVVDASHPDPEGQIAAVRKVFSEVDA-RKVPE--IIV 423
Query: 399 GNKVDAVPP--GERVT--EEYDLLISATRGTGLAQLKEKVQDMILKAT 442
NK DA P ER+ E +++SA G G+ +L + + I + +
Sbjct: 424 LNKADAADPFVVERLKQREPRHVVVSARTGEGIPELLRAISEAIPRPS 471
>gi|408791822|ref|ZP_11203432.1| GTP-binding protein HflX [Leptospira meyeri serovar Hardjo str.
Went 5]
gi|408463232|gb|EKJ86957.1| GTP-binding protein HflX [Leptospira meyeri serovar Hardjo str.
Went 5]
Length = 519
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/357 (33%), Positives = 195/357 (54%), Gaps = 30/357 (8%)
Query: 99 KKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRG 157
+KMKR+ + +AE K L + G VVD T + D ++ GKG L E++ V
Sbjct: 165 RKMKRSP--EHSMAELKELCRT-AGIHVVD-TYVQKRDPDPRTVVGKGKLQEIILTSVHK 220
Query: 158 DARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELP 217
D + + ++ L Q K + D + + DR +++ IF +AK+R+ +LQ+ +A+L
Sbjct: 221 D--IEHLIFDLE-LTPSQAKKISDATDLKIIDRTQLILDIFSKNAKSRDGKLQVELAQLK 277
Query: 218 YLWTRYRTIEDATNMNI------------TKGFLDSKRMVLMEREQKLKKALNKLKGQRE 265
YL R ++D NM+ TK + ++R+ E+ +L+ L LK +RE
Sbjct: 278 YLKNRLSELDD--NMSRLTGGIGGRGPGETKLEIGNRRV--EEKITRLENELKDLKRRRE 333
Query: 266 MMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL 325
+ R + R + P V +VGYTN GK+TL+ ALT+ +++ ++LFATLD TT P
Sbjct: 334 LNRKARSRNEIPIVGIVGYTNAGKSTLLNALTNS-TVIAEDKLFATLDPTTRRIRFPEER 392
Query: 326 RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL 385
I+ DT+GFI ++P L + FK TLE+ AD+++HVVD +N +Y +Q + VD L L
Sbjct: 393 EIIISDTVGFIHDLPPDLSQAFKATLEELGDADLLLHVVDSTNSNYTEQMEAVDTILNSL 452
Query: 386 ELEEKILEHVLVVGNKVDAVPPGERVTEEYD--LLISATRGTGLAQLKEKVQDMILK 440
+L E +VV NK D + R + E + LL+SA GL+ L + +++ + K
Sbjct: 453 QLNEI---PRMVVFNKADGLDEETRASFEKNEALLVSAVTREGLSHLLDLIEEELWK 506
>gi|296121964|ref|YP_003629742.1| GTP-binding proten HflX [Planctomyces limnophilus DSM 3776]
gi|296014304|gb|ADG67543.1| GTP-binding proten HflX [Planctomyces limnophilus DSM 3776]
Length = 464
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/389 (31%), Positives = 208/389 (53%), Gaps = 30/389 (7%)
Query: 106 TRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVF 165
+R+ +L E K LV + G +VV + + G G +E LK + + R V
Sbjct: 55 SRENVLDELKGLVKT-AGVKVVGELVQFRQMVHPGTCLGPGKIEELK-LILEETRAELVI 112
Query: 166 VSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY------- 218
++ +++ Q+ +V + DR +++ IF HA+T EARLQ+ +A+L Y
Sbjct: 113 FDNNLTPGQGRRLEQETGRV-IVDRSELILDIFATHARTAEARLQVELAQLQYNRTRLKR 171
Query: 219 LWTRYRTIEDATNMNITKGF--LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
LWT I+ + G +++ R ++ +R +L+ +L +++ +RE M KQR+
Sbjct: 172 LWTHLERIDGGIGASRGPGEKQIETDRRLIDQRISELQSSLKEVEQRRERM--VKQRRDH 229
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
V++VGYTN GK+TL++ALT ++ + +QLFATLD T +P L DT+GF+
Sbjct: 230 ALVSLVGYTNAGKSTLMRALTGEEVYIA-DQLFATLDTKTRLWKIPGWGDALLSDTVGFV 288
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++P +L+ FK TLE+A AD+++HVVD SNP+ Q V+ L+ + +E L++ +
Sbjct: 289 RDLPHSLVASFKSTLEEARHADLLLHVVDASNPEAEAQVATVEAVLEEIGVE---LKNFI 345
Query: 397 VVGNKVDAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
+V NK D VP R E+ + ISA G GL +L + V D + G +++T V
Sbjct: 346 LVLNKADQVPDRMALDLLRARYEWSVSISARTGDGLDRLAQLVVDRL--GDGLESVT--V 401
Query: 452 RSG---GSEYQWLMKHTAVSNIREDDTSA 477
+G G WL +H + + +T+A
Sbjct: 402 STGIEDGKLLGWLSEHATIIDTHYSETTA 430
>gi|384921713|ref|ZP_10021680.1| GTP-binding protein, HSR1-like [Citreicella sp. 357]
gi|384464380|gb|EIE48958.1| GTP-binding protein, HSR1-like [Citreicella sp. 357]
Length = 417
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 193/375 (51%), Gaps = 36/375 (9%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
V +T++ L + FG G +E L+ ++ + + V V V + QQ+ L+ ++V
Sbjct: 39 VAGATVVPLRDPHPGTLFGSGKIEELRARIEAE-EIELVLVDGPVSPV-QQRNLEKAWKV 96
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
+ DR ++++IF A TRE LQ+ +A L Y R R + T++ +G
Sbjct: 97 KLLDRTGLILEIFSDRAATREGVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGP 154
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+++ R + E+ +L++ L+++ RE+ R + + +P VA+VGYTN GK+TL
Sbjct: 155 GETQIEADRRAIDEQLVRLRRQLDRVVKTRELHRKARAKVPYPIVALVGYTNAGKSTLFN 214
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT D ++ ++ LFATLD T LP + ++ DT+GFIS++PT L+ F+ TLE+
Sbjct: 215 RLTGAD-VMAKDMLFATLDPTMRAVRLPTGIDVILSDTVGFISDLPTELVAAFRATLEEV 273
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEE 414
+ ADII+HV D+S+P+ +Q + VD+ L L + E + +L V NK D + P E
Sbjct: 274 IAADIILHVRDISHPNTAEQARDVDQILTSLGVNEDV--PLLEVWNKTDRLDP-----ES 326
Query: 415 YDLL------------ISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLM 462
+D + SA G GL L V D + + +++ + G WL
Sbjct: 327 HDAMQARADRDEGVFAASALTGAGLDTLLRAVTDRLQGDSIEEDLRLGF-DDGKRRSWLF 385
Query: 463 KHTAVSNIREDDTSA 477
V + R+DD +
Sbjct: 386 GKGLVLDERQDDDGS 400
>gi|379709901|ref|YP_005265106.1| putative GTP-binding protein [Nocardia cyriacigeorgica GUH-2]
gi|374847400|emb|CCF64470.1| putative GTP-binding protein [Nocardia cyriacigeorgica GUH-2]
Length = 507
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 175/322 (54%), Gaps = 25/322 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G E L+ V G T + L Q L+ + +V V DR +++ I
Sbjct: 122 DPATYIGSGKAEELRSVVLGSGADT--VICDGELTPAQLTALEKVVKVKVIDRTALILDI 179
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HA +RE + Q+A+A++ Y+ R R ++ N G +++
Sbjct: 180 FAQHATSREGKAQVALAQMEYMLPRLRGWGESMSRQAGGRAGSNGGVGLRGPGETKIETD 239
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R + ER KL++ + ++K R+ MR+++ P+VA+VGYTN GK++L+ ALT L
Sbjct: 240 RRRIRERMAKLRREIREMKTARDTMRSRRTSSGIPSVAIVGYTNAGKSSLMNALTGSGVL 299
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V ++ LFATLD TT L + +++ DT+GF+ ++PT L+E F+ TLE+ AD+++H
Sbjct: 300 V-QDALFATLDPTTRRAELDDGREVVFTDTVGFVRHLPTQLVEAFRSTLEEVTGADLLLH 358
Query: 363 VVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVVGNKVDAVPPGE----RVTEEYD 416
VVD S+ +Q + V E + + E +LVV NK+DA+ P E R
Sbjct: 359 VVDGSDALPSEQIKAVREVVTDVIRESGTPAPPELLVV-NKIDAIDPVELTRLRALLPGA 417
Query: 417 LLISATRGTGLAQLKEKVQDMI 438
+ +SA +GTG+ +L++++ +++
Sbjct: 418 VFVSAHKGTGIDELRDRLAEVL 439
>gi|240850696|ref|YP_002972096.1| GTP-binding protein HflX [Bartonella grahamii as4aup]
gi|240267819|gb|ACS51407.1| GTP-binding protein HflX [Bartonella grahamii as4aup]
Length = 447
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 185/346 (53%), Gaps = 25/346 (7%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
ES L +I+ VV+ I++ + + FGKG ++ L + D + + L
Sbjct: 48 ESLGLARAIR-LEVVNYETINIATPRSATLFGKGKVDALTCYI--DEYSIELAIVDHFLT 104
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
QQ+ L+ L+ V DR ++++IF A+T+E LQ+ +A L Y + R + T++
Sbjct: 105 PVQQRNLEKLWNCKVIDRTALILEIFGDRARTKEGVLQVELAHLSY--QKGRLVRSWTHL 162
Query: 233 NITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
+G +++ R +L E+ ++++ L + R + R K+++ +P VA+
Sbjct: 163 ERQRGGRGFLGGPGETQIEADRRLLQEKIIRIRRELETVIKTRALHRAKRKKTSYPVVAL 222
Query: 282 VGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPT 341
VGYTN GK+TL L+ D L +N LFATLD T + +LP+ IL DT+GFISN+PT
Sbjct: 223 VGYTNTGKSTLFNRLSGADVL-AKNMLFATLDPTLRKVVLPHGKTILLSDTVGFISNLPT 281
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
L+ F+ TLE+ + AD+I+HV D+S+ D+ Q V E L L+++ +EH++ V NK
Sbjct: 282 NLIAAFRATLEEVVEADLILHVRDMSDLDHRAHAQDVLEVLSSLDIDIDDMEHIIEVWNK 341
Query: 402 VD--------AVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMIL 439
+D + + L++SA +G GL QL ++ I
Sbjct: 342 IDMLDEQALNVLQTSAKTRLNPALMVSALKGDGLDQLLRAIEKRIF 387
>gi|427390250|ref|ZP_18884656.1| GTP-binding protein HflX [Actinobaculum massiliae ACS-171-V-Col2]
gi|425733265|gb|EKU96071.1| GTP-binding protein HflX [Actinobaculum massiliae ACS-171-V-Col2]
Length = 515
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/323 (34%), Positives = 168/323 (52%), Gaps = 30/323 (9%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQ 196
D +F GKG L VR TA V VD L Q++ L+D+ V V DR +V+
Sbjct: 132 DNATFLGKGKAHELADLVRAQ---TADTVIVDSELAPSQRRALEDVVGVKVIDRTALVLD 188
Query: 197 IFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI-----------------TKGFL 239
IF HAK++E + Q+ +A+L YL R R ++ + T+ L
Sbjct: 189 IFARHAKSKEGKAQVELAQLEYLLPRLRGWGESMSRQAGGQVAGGAGIGSRGPGETQLEL 248
Query: 240 DSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDD 299
D +R+ R KL++ + K+K RE R ++QR P+V +VGYTN GK++L+ LT
Sbjct: 249 DRRRIRF--RMAKLRRDIKKMKPARETRRAERQRTGIPSVVIVGYTNAGKSSLLNRLTGA 306
Query: 300 DSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADI 359
LV N LFATLD T P+ DT+GF+ N+PT L+E F+ TLE+ AD+
Sbjct: 307 GVLV-ENALFATLDPTVRRARTPSDREFTLSDTVGFVRNLPTQLVEAFRSTLEEVGEADV 365
Query: 360 IIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE----RVTEEY 415
++HVVD S+ D + Q + V E L ++ + E L+V +K+D P + R
Sbjct: 366 LLHVVDASHADPVGQVKAVHEVLNGVDGAREAPE--LIVLSKIDLADPVDLAALRTRFPD 423
Query: 416 DLLISATRGTGLAQLKEKVQDMI 438
+ +SA G GL +L K+ +++
Sbjct: 424 AVAVSAATGEGLDELMGKIDELL 446
>gi|309792496|ref|ZP_07686960.1| GTP-binding proten HflX [Oscillochloris trichoides DG-6]
gi|308225484|gb|EFO79248.1| GTP-binding proten HflX [Oscillochloris trichoides DG6]
Length = 458
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 177/343 (51%), Gaps = 27/343 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
AL++ G VV S + K F G G + + ++R V D L Q
Sbjct: 58 ALLADTAGLEVVGSIYQRIDQPFPKYFIGPGKVREVA-ELREQCGAGLVIFD-DELSPAQ 115
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYR----------- 224
+ L++ QV V DR +++ IF HA+T E RLQ+ +A+ Y+ R R
Sbjct: 116 TRNLEEALQVGVLDRTALILDIFAQHARTHEGRLQVELAQYNYMLPRLRRQWSHLERQAG 175
Query: 225 --TIEDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
A + +G L+ R ++ +R LK+ L + RE+ R +++ P
Sbjct: 176 TGGGTSAGGVVGLRGPGETQLEIDRRLIDQRIAWLKEQLADVHRHRELYRQRRKGSGVPV 235
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+VGYTN GK+TL+ AL+ D L ++QLFATLD TT + LP IL DT+GFI
Sbjct: 236 VALVGYTNAGKSTLLNALSGADVLT-QDQLFATLDPTTRQVTLPGNHHILLTDTVGFIQK 294
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+PT L+ F+ TLE+ AD+++HVVD+++P+ + Q V++TL+ L + K VL
Sbjct: 295 LPTQLVAAFRATLEEINEADLLLHVVDLTHPNAQEHAQTVEKTLEELGVSRKATLTVLNK 354
Query: 399 GNKVDAVPPGE--RVTEEYDL-----LISATRGTGLAQLKEKV 434
+K++ V GE + E L +SA RG GL QL E++
Sbjct: 355 VDKLEGVAAGEVADLVREMGLPSDVIAVSAQRGWGLDQLGERI 397
>gi|415723557|ref|ZP_11469563.1| GTP-binding protein [Gardnerella vaginalis 00703C2mash]
gi|388063405|gb|EIK85989.1| GTP-binding protein [Gardnerella vaginalis 00703C2mash]
Length = 505
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 190/378 (50%), Gaps = 34/378 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLH 174
A ++ G V D + D ++ G G EL + DA V D L
Sbjct: 110 AALAKTAGAVVCDGMLQQRYRPDAATYVGSGKARELAAVVAQNDADTIVVD---DDLPPS 166
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--- 231
Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 167 QRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQLQYMLPRLRGWGAALSRQA 226
Query: 232 --------MNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++G ++K R + R KL+ + + RE R ++RQ PTV
Sbjct: 227 GGRAAGDAGIGSRGPGETKIEMDRRAIRNRISKLRHDIALMAPTRETKRGSRRRQDIPTV 286
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GK+++I LT LV N LFATLD + + + VDT+GF+ +
Sbjct: 287 AVVGYTNAGKSSIINRLTGSKELV-ENALFATLDTAVRKSLTKDGRAYTLVDTVGFVRRL 345
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E FK TLE+ AD+I+HVVD S+PD + Q + V+E L ++ E I + ++
Sbjct: 346 PTQLVEAFKSTLEEVGQADVILHVVDGSHPDPVSQIEAVNEVLAQIDGVEDIAQ--IIAF 403
Query: 400 NKVDAV--PPGERVTEEY--DLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGG 455
NK D + P R+ Y L++SA G + LK +V++++ ++ ++VR
Sbjct: 404 NKSDVMQEPMRLRLQSLYPDSLIVSAQSGENIEHLKARVENLLPS----PHVHVKVRLPY 459
Query: 456 SEYQWLMKHTAVSNIRED 473
S+Y + +S +RE+
Sbjct: 460 SDYSGSL----LSKVREN 473
>gi|168334214|ref|ZP_02692417.1| ATP/GTP-binding protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 411
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 186/340 (54%), Gaps = 25/340 (7%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E + LV + G V+ I + + K + G G +E LK + + T V ++
Sbjct: 24 LEELRELVET-AGASVIGELIQKVDKINAKHYLGTGKIEELKLYIE-EVGATGVVCDTEL 81
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
L Q K L ++ V DR ++++ IF A + E +LQ+ +A+L Y ++R
Sbjct: 82 SPL-QMKNLSEILDTKVMDRTLVILDIFAQRATSSEGKLQVEMAQLKYQYSRLAG--TGI 138
Query: 231 NMNITKGFLDSK----------RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
+M+ G + SK + + +R L+K L ++K RE++R K+ +++ V+
Sbjct: 139 SMSRQAGGIGSKGPGEKKLELDKRNIRKRMDILEKELAEVKRHREIIRKKRVKEEVRVVS 198
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+VGYTN GK+TL+ LT D V + QLFATLD TT + +LP+ + +VDT+GFI +P
Sbjct: 199 IVGYTNAGKSTLLNVLTGSDIYVEK-QLFATLDTTTRKAILPSGTEVRFVDTVGFIKKLP 257
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
L++ F TLE+ +DIIIH++D SN Q V+ETL++L++E VL V N
Sbjct: 258 HQLIKAFYSTLEEVRYSDIIIHLIDASNEHNESHIQVVEETLKNLKIEGI---PVLKVYN 314
Query: 401 KVDAVPPGERV--TEEYDLLISATRGTGLAQLKEKVQDMI 438
KVD E+V E +L ISA G L +L+ K+++++
Sbjct: 315 KVD----NEQVYIEELENLTISAKTGLNLDKLQLKIEEIL 350
>gi|311114410|ref|YP_003985631.1| GTP-binding protein HflX [Gardnerella vaginalis ATCC 14019]
gi|310945904|gb|ADP38608.1| GTP-binding protein HflX [Gardnerella vaginalis ATCC 14019]
Length = 489
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 176/343 (51%), Gaps = 26/343 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLH 174
A ++ G V D + D ++ G G EL + DA V D L
Sbjct: 94 AALAKTAGAVVCDGMLQQRYRPDAATYVGSGKARELAAVVAQNDADTIVVD---DDLPPS 150
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--- 231
Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 151 QRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQLQYMLPRLRGWGAALSRQA 210
Query: 232 --------MNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++G ++K R + R KL+ + + RE R ++RQ PTV
Sbjct: 211 GGRAAGDAGIGSRGPGETKIEMDRRAIRNRISKLRHDIALMAPTRETKRGSRRRQDIPTV 270
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GK+++I LT LV N LFATLD + + + VDT+GF+ +
Sbjct: 271 AVVGYTNAGKSSIINRLTGSKELV-ENALFATLDTAVRKSLTKDGRAYTLVDTVGFVRRL 329
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E FK TLE+ AD+I+HVVD S+PD + Q + V+E L ++ E I + ++
Sbjct: 330 PTQLVEAFKSTLEEVGNADVILHVVDGSHPDPVSQIEAVNEVLAQIDGVEDIAQ--IIAF 387
Query: 400 NKVDAV--PPGERVTEEY--DLLISATRGTGLAQLKEKVQDMI 438
NK D + P R+ Y L++SA GT + +L+ ++++++
Sbjct: 388 NKSDVMQEPMRLRLQSLYPDSLIVSAASGTNIDRLRTRIENLL 430
>gi|77463363|ref|YP_352867.1| GTP-binding protein [Rhodobacter sphaeroides 2.4.1]
gi|77387781|gb|ABA78966.1| Putative GTP-binding protein [Rhodobacter sphaeroides 2.4.1]
Length = 416
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 207/411 (50%), Gaps = 31/411 (7%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ FV+ P I+ + + D LAE+ +L +++ +V ++ L FG G
Sbjct: 2 RAFVLHPDIRTERSRR---LPDLRLAEAVSLAAALPDMEIVGQEVVRLPRAQPGLLFGTG 58
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
+E LK + +G V V V V + QQ+ L+ + V + DR ++++IF A+TRE
Sbjct: 59 KVEELKARFKG-LDVGLVLVDGPVSPV-QQRNLEKEWGVKLLDRTGLILEIFADRARTRE 116
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKK 255
LQ+ +A L Y R R + T++ +G +++ R + E+ ++++
Sbjct: 117 GVLQVELAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDEQVIRIRR 174
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L+K+ RE+ R +++ FP VA+VGYTN GK+TL +T D L ++ LFATLD T
Sbjct: 175 QLDKVVKTRELHRASRRKVPFPIVALVGYTNAGKSTLFNRMTGADVLA-KDMLFATLDPT 233
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
LP+ +++ DT+GFIS++PT L+ F+ TLE+ + AD+I+HV D+++P+ +Q
Sbjct: 234 MRGVTLPSGRKVILSDTVGFISDLPTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQA 293
Query: 376 QHVDETLQHLELEEKILEHVLVVGNKVDAVPP-------GERVTEEYDLLISATRGTGLA 428
V E LQ L ++ + + V NK+D V + E +SA G GL
Sbjct: 294 ADVAEILQSLGVKGATPQ--VEVWNKLDLVEGAAHEQLLAQAAKSETIFALSALTGEGLP 351
Query: 429 QLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEH 479
L E V + + +T+ + G WL V+ E +T H
Sbjct: 352 DLLEAVSATFDEEKTERQLTLGF-ADGRRRAWLHAEGVVTG--EAETEEGH 399
>gi|403720426|ref|ZP_10943983.1| putative GTP-binding protein HflX [Gordonia rhizosphera NBRC 16068]
gi|403207745|dbj|GAB88314.1| putative GTP-binding protein HflX [Gordonia rhizosphera NBRC 16068]
Length = 497
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 183/350 (52%), Gaps = 29/350 (8%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G +V+D+ I D ++ G G + L+ V T + L Q L+ +
Sbjct: 107 GSQVLDALIQRRSRPDSATYIGSGKADELREAVLATGADT--VICDGELTPAQLTALEKI 164
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNI 234
+V V DR +++ IF HA +RE + Q+++A++ Y+ R R ++ N
Sbjct: 165 VKVKVIDRTALILDIFAQHATSREGKAQVSLAQMEYMLPRLRGWGESMSRQAGGRAGSNG 224
Query: 235 TKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
G +++ R + ER KL++ + ++K R +MR ++R P + VVGYTN
Sbjct: 225 GVGLRGPGETKIETDRRRIRERMAKLRREIREMKKSRTVMRAARERTGIPRLTVVGYTNA 284
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GK++L+ A+T LV +N LFATLD TT L + +++ DT+GF+ ++PT L+E F
Sbjct: 285 GKSSLVNAMTGAGVLV-QNALFATLDPTTRRATLDDGRAVVFTDTVGFVRHLPTQLVEAF 343
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV-LVVGNKVDAVP 406
+ TLE+ + AD+++HVVD S+P +Q V + + + EE L+V NK+DA+
Sbjct: 344 RSTLEEVVDADLLLHVVDGSDPFPAEQISAVRQVIGEVVAEEGAQPPPELLVINKIDAI- 402
Query: 407 PGERVTEEYDLL-----ISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
R+TE +SA G GL +L E++++ I GR +I M +
Sbjct: 403 DATRMTELRGAFGDAAYVSARTGEGLPELFERIREFI----GRSDIEMTI 448
>gi|75675642|ref|YP_318063.1| HSR1-like GTP-binding protein [Nitrobacter winogradskyi Nb-255]
gi|74420512|gb|ABA04711.1| GTP-binding protein HflX [Nitrobacter winogradskyi Nb-255]
Length = 442
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 203/411 (49%), Gaps = 41/411 (9%)
Query: 87 QVFVVQPFIKW-------GKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDK 139
+ V+ P+++ ++ RNT D L E+ L +I V+ + + +
Sbjct: 8 RAIVIGPYVRTRGGDAETPRRSLRNT--DARLDEAAGLAKAID-LHVIQAIVAPVSQIRP 64
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIF 198
++ GKG +E L+ + D A V +D L QQ+ L+ + V DR ++++IF
Sbjct: 65 ATYLGKGKVEELQGLIAADG---AGLVVMDCALSPIQQRNLEKAWSTKVLDRTGLILEIF 121
Query: 199 KAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLM 247
AKT+E LQ+ +A L Y R R + T++ +G +++ R ++
Sbjct: 122 GRRAKTKEGALQVELAHLNY--QRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLIG 179
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
+R +L+ L K++ R + R +QR + VA+VGYTN GK+TL LT D + +
Sbjct: 180 DRITRLENELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRAD-VQAADM 238
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T LP+ + + DT+GFISN+PT L+ F+ TLE+ M AD+I+HV D+S
Sbjct: 239 LFATLDPTLRSLALPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVMEADVILHVRDIS 298
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP----------PGERVTEEYDL 417
+ D Q+ V+ L L ++ ++ V NK+D R T+
Sbjct: 299 HEDTEPQQHDVEAVLHQLGIDPDGPARMIEVWNKIDRFDADQRKDLENVAARRSTDVPRF 358
Query: 418 LISATRGTGLAQLKEKVQDMILKATGRKNITMRV-RSGGSEYQWLMKHTAV 467
L+SA G G+ L ++D + A R + + V S G+ WL +++ V
Sbjct: 359 LVSAETGEGVETLLAAIEDRL--AATRTTLDLSVDASDGAAISWLHRNSEV 407
>gi|385801946|ref|YP_005838349.1| GTP-binding protein HflX [Gardnerella vaginalis HMP9231]
gi|415705561|ref|ZP_11460832.1| GTP-binding protein [Gardnerella vaginalis 75712]
gi|415706483|ref|ZP_11461472.1| GTP-binding protein [Gardnerella vaginalis 0288E]
gi|417556257|ref|ZP_12207316.1| GTP-binding protein HflX [Gardnerella vaginalis 315-A]
gi|333393907|gb|AEF31825.1| GTP-binding protein HflX [Gardnerella vaginalis HMP9231]
gi|333602752|gb|EGL14177.1| GTP-binding protein HflX [Gardnerella vaginalis 315-A]
gi|388052283|gb|EIK75307.1| GTP-binding protein [Gardnerella vaginalis 75712]
gi|388054695|gb|EIK77630.1| GTP-binding protein [Gardnerella vaginalis 0288E]
Length = 505
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 176/343 (51%), Gaps = 26/343 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLH 174
A ++ G V D + D ++ G G EL + DA V D L
Sbjct: 110 AALAKTAGAVVCDGMLQQRYRPDAATYVGSGKARELAAVVAQNDADTIVVD---DDLPPS 166
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--- 231
Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 167 QRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQLQYMLPRLRGWGAALSRQA 226
Query: 232 --------MNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++G ++K R + R KL+ + + RE R ++RQ PTV
Sbjct: 227 GGRAAGDAGIGSRGPGETKIEMDRRAIRNRISKLRHDIALMAPTRETKRGSRRRQDIPTV 286
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GK+++I LT LV N LFATLD + + + VDT+GF+ +
Sbjct: 287 AVVGYTNAGKSSIINRLTGSKELV-ENALFATLDTAVRKSLTKDGRAYTLVDTVGFVRRL 345
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E FK TLE+ AD+I+HVVD S+PD + Q + V+E L ++ E I + ++
Sbjct: 346 PTQLVEAFKSTLEEVGNADVILHVVDGSHPDPVSQIEAVNEVLAQIDGVEDIAQ--IIAF 403
Query: 400 NKVDAV--PPGERVTEEY--DLLISATRGTGLAQLKEKVQDMI 438
NK D + P R+ Y L++SA GT + +L+ ++++++
Sbjct: 404 NKSDVMQEPMRLRLQSLYPDSLIVSAASGTNIDRLRTRIENLL 446
>gi|325663508|ref|ZP_08151918.1| GTP-binding protein HflX [Lachnospiraceae bacterium 4_1_37FAA]
gi|325470407|gb|EGC73638.1| GTP-binding protein HflX [Lachnospiraceae bacterium 4_1_37FAA]
Length = 417
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 164/306 (53%), Gaps = 11/306 (3%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG L+ +K + + T + D L Q LQD V DR +I++ IF
Sbjct: 59 TYVGKGKLDEIK-NLLWETDATGIICD-DELSPAQLGNLQDALDTKVMDRTLIILDIFAE 116
Query: 201 HAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQK 252
A T E ++Q+ +A+L Y +R R + L+ R ++ R +
Sbjct: 117 RASTNEGKIQVELAQLKYRQSRLVGLGKSLSRLGGGIGTRGPGEKKLEMDRRLIKGRIAQ 176
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
L + L +K RE+ R ++ R P +A+VGYTN GK+TL+ LT S++ ++LFATL
Sbjct: 177 LNRELKDVKRHREVTREQRSRNHIPVIAIVGYTNAGKSTLLNRLTGA-SVLEEDKLFATL 235
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT LP+ +L DT+GFI +P L+E FK TLE+A AD+I+HVVDVSNP
Sbjct: 236 DPTTRGLKLPSGQEVLLTDTVGFIRKLPHHLIEAFKSTLEEAKYADMILHVVDVSNPQMD 295
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKE 432
+Q V ETLQ+L++++K++ +++ VP + + ISA G GL L+
Sbjct: 296 EQMYTVYETLQNLDVKDKVVITAFNKQDRLTEVPIIRDFKANHIVNISARTGQGLDTLQS 355
Query: 433 KVQDMI 438
++ ++
Sbjct: 356 VIEQIL 361
>gi|331087033|ref|ZP_08336108.1| GTP-binding protein HflX [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330409483|gb|EGG88926.1| GTP-binding protein HflX [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 417
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 164/306 (53%), Gaps = 11/306 (3%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG L+ +K + + T + D L Q LQD V DR +I++ IF
Sbjct: 59 TYVGKGKLDEIK-NLLWETDATGIICD-DELSPAQLGNLQDALDTKVMDRTLIILDIFAE 116
Query: 201 HAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQK 252
A T E ++Q+ +A+L Y +R R + L+ R ++ R +
Sbjct: 117 RASTNEGKIQVELAQLKYRQSRLVGLGKSLSRLGGGIGTRGPGEKKLEMDRRLIKGRIAQ 176
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
L + L +K RE+ R ++ R P +A+VGYTN GK+TL+ LT S++ ++LFATL
Sbjct: 177 LNRELKDVKRHREVTREQRSRNHIPVIAIVGYTNAGKSTLLNRLTGA-SVLEEDKLFATL 235
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT LP+ +L DT+GFI +P L+E FK TLE+A AD+I+HVVDVSNP
Sbjct: 236 DPTTRGLKLPSGQEVLLTDTVGFIRKLPHHLIEAFKSTLEEAKYADMILHVVDVSNPQMD 295
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKE 432
+Q V ETLQ+L++++K++ +++ VP ++ ISA G GL L+
Sbjct: 296 EQMYTVYETLQNLDVKDKVVITAFNKQDRLTEVPIIRDFKADHIANISARTGQGLDALQS 355
Query: 433 KVQDMI 438
++ ++
Sbjct: 356 VIEQIL 361
>gi|308176886|ref|YP_003916292.1| GTPase [Arthrobacter arilaitensis Re117]
gi|307744349|emb|CBT75321.1| putative GTPase [Arthrobacter arilaitensis Re117]
Length = 553
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 175/344 (50%), Gaps = 28/344 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D + D +F G G E L+ V A A V VD L
Sbjct: 157 AALAETAGSEVLDGLVQRRSKPDPSTFLGSGKAEELRAIV---ASSGADTVVVDAELAPS 213
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HA++RE + Q+ +A+L YL R R ++ +
Sbjct: 214 QRRALEDIVKVKVIDRTSLILDIFAQHAQSREGKAQVELAQLEYLLPRLRGWGESMSRQA 273
Query: 235 TKGF----------------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
++ R + +R KL++ + +K RE R ++R P
Sbjct: 274 GGRVGAAGGGIGSRGPGETKIEMDRRRIRDRMAKLRREIKAMKPAREAKRANRKRNAVPA 333
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+ GYTN GK++L+ LT+ LV N LFATLD T + + L DT+GF+SN
Sbjct: 334 VAIAGYTNAGKSSLLNRLTNAGVLV-ENALFATLDPTVRQSATEDGLTYTLADTVGFVSN 392
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+PT L+E F+ TLE+ +D+I+HVVD S+PD Q Q V L E++ + ++VV
Sbjct: 393 LPTQLVEAFRSTLEEIADSDLILHVVDGSHPDPEGQIQAVRTVLG--EVDALNIPEIIVV 450
Query: 399 GNKVDAVPPG--ERV--TEEYDLLISATRGTGLAQLKEKVQDMI 438
NK D P ER+ E ++SA G G+ +L EK+ I
Sbjct: 451 -NKADVADPFVIERIRNRESNTAVVSAHTGEGIEELLEKISSSI 493
>gi|114327788|ref|YP_744945.1| GTP-binding protein HflX [Granulibacter bethesdensis CGDNIH1]
gi|114315962|gb|ABI62022.1| GTP-binding protein hflX [Granulibacter bethesdensis CGDNIH1]
Length = 460
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 197/376 (52%), Gaps = 24/376 (6%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
L +SI G VV S ++ L + + G+G ++L + + G +T V V + + Q
Sbjct: 56 GLAASI-GLVVVHSGVLPLRARRPSTLLGEGQVQLTGQALAGQ-NITVVIVDAALTPV-Q 112
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNIT 235
Q+ L+ + V DR +++ IF A TRE LQ+ +A L Y R R + T++
Sbjct: 113 QRNLERAWNTKVIDRTGLILDIFGERAATREGTLQVELAHLEY--QRSRLVRSWTHLERQ 170
Query: 236 KGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGY 284
+G +++ R ++ +R KLK+ L +++ R + R +QR FP VA+VGY
Sbjct: 171 RGGFGFLGGPGETQIEADRRLITDRIVKLKRELEQVRRTRGLHRTARQRVPFPVVALVGY 230
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
TN GK+TL A+T +++ ++QLFATLD T L + R++ DT+GFIS +PT L+
Sbjct: 231 TNAGKSTLFNAMTGS-TVLAKDQLFATLDPTMRGLRLRSGRRVILSDTVGFISELPTELI 289
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHV----DETLQHLELEEKILEHVLVVGN 400
F+ TLE+ AD+I+HV DVS+PD Q+ V D ++ +L+ ++ V N
Sbjct: 290 AAFRATLEEVAEADVILHVRDVSHPDTAAQRHDVQLVLDGMVRDHDLDADWRGRMIEVLN 349
Query: 401 KVDAVPPGERVT-EEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQ 459
K D + E V+ + +SA G GL +L+ + I + ++ + G+
Sbjct: 350 KADLLGGVEHVSVAPGSVAVSAITGAGLDELQAVIDARIAAGLTIAHYSVPA-ADGAAMA 408
Query: 460 WLMKHTAVSNIREDDT 475
WL +H V + R+DD
Sbjct: 409 WLHEHGEVLD-RQDDA 423
>gi|429206479|ref|ZP_19197745.1| GTP-binding protein HflX [Rhodobacter sp. AKP1]
gi|428190520|gb|EKX59066.1| GTP-binding protein HflX [Rhodobacter sp. AKP1]
Length = 447
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 207/411 (50%), Gaps = 31/411 (7%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ FV+ P I+ + + D LAE+ +L +++ +V ++ L FG G
Sbjct: 33 RAFVLHPDIRTERSRR---LPDLRLAEAVSLAAALPDMEIVGQEVVRLPRAQPGLLFGTG 89
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
+E LK + +G V V V V + QQ+ L+ + V + DR ++++IF A+TRE
Sbjct: 90 KVEELKARFKG-LDVGLVLVDGPVSPV-QQRNLEKEWGVKLLDRTGLILEIFADRARTRE 147
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKK 255
LQ+ +A L Y R R + T++ +G +++ R + E+ ++++
Sbjct: 148 GVLQVELAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDEQVIRIRR 205
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L+K+ RE+ R +++ FP VA+VGYTN GK+TL +T D L ++ LFATLD T
Sbjct: 206 QLDKVVKTRELHRASRRKVPFPIVALVGYTNAGKSTLFNRMTGADVLA-KDMLFATLDPT 264
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
LP+ +++ DT+GFIS++PT L+ F+ TLE+ + AD+I+HV D+++P+ +Q
Sbjct: 265 MRGVTLPSGRKVILSDTVGFISDLPTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQA 324
Query: 376 QHVDETLQHLELEEKILEHVLVVGNKVDAVPP-------GERVTEEYDLLISATRGTGLA 428
V E LQ L ++ + + V NK+D V + E +SA G GL
Sbjct: 325 ADVAEILQSLGVKGATPQ--VEVWNKLDLVEGAAHEQLLAQAAKSETIFALSALTGEGLP 382
Query: 429 QLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEH 479
L E V + + +T+ + G WL V+ E +T H
Sbjct: 383 DLLEAVSATFDEEKTERQLTVGF-ADGRRRAWLHAEGVVTG--EAETEEGH 430
>gi|294677339|ref|YP_003577954.1| GTP-binding proten HflX [Rhodobacter capsulatus SB 1003]
gi|294476159|gb|ADE85547.1| GTP-binding proten HflX [Rhodobacter capsulatus SB 1003]
Length = 427
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 209/393 (53%), Gaps = 29/393 (7%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+V+V+ P +K + + LAE+ +L +++ +++ I+ L FG G
Sbjct: 13 RVWVLHPDLK---AVDARREPELRLAEAVSLAAALPDLQIMGHEIVRLPKPHAGHLFGTG 69
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
+ LK +++ A V V V V + QQ+ L+ + V + DR ++++IF A+TRE
Sbjct: 70 KMAELKERLQA-AEVDLVLVDGPVSPI-QQRNLEKEWGVKLLDRTGLILEIFADRARTRE 127
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKK 255
LQ+ +A L Y R R + T++ +G +++ R + ++ +LK+
Sbjct: 128 GVLQVELAALSY--QRTRLVRAWTHLERQRGGFGFVGGPGETQIEADRRAIDDQVIRLKR 185
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L K+ RE+ R +++ FP VA+VGYTN GK++L +T + L ++ LFATLD T
Sbjct: 186 QLAKVVKTRELHRAARRKVPFPIVALVGYTNAGKSSLFNRMTGAEVLA-KDMLFATLDPT 244
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
+LP+ RI+ DT+GFIS++P L+ F+ TLE+ + AD+I+HV D+S+P+ +Q
Sbjct: 245 MRGLVLPSGRRIILSDTVGFISDLPHELVAAFRATLEEVLEADLILHVRDISHPETEEQA 304
Query: 376 QHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERV------TEEYDL-LISATRGTGLA 428
+ V E L+ L + E + ++ V NK+DA+ R D+ +SA G G+
Sbjct: 305 EDVGEILESLGVAEDV--ALIEVWNKIDALSEAVRQGLLAQDARRSDVQAVSALSGEGIG 362
Query: 429 QLKEKVQDMILKATGRKNITMRVRSGGSEYQWL 461
L ++ + +A +++ + + G E+ WL
Sbjct: 363 ALVAAIEARLGEAWIEEDLDLPF-TAGKEHAWL 394
>gi|126462218|ref|YP_001043332.1| small GTP-binding protein [Rhodobacter sphaeroides ATCC 17029]
gi|126103882|gb|ABN76560.1| small GTP-binding protein [Rhodobacter sphaeroides ATCC 17029]
Length = 447
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 206/411 (50%), Gaps = 31/411 (7%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ FV+ P I+ + + D LAE+ +L +++ +V ++ L FG G
Sbjct: 33 RAFVLHPDIRTERSRR---LPDLRLAEAVSLAAALPDMEIVGQEVVRLPRAQPGLLFGTG 89
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
+E LK + G V V V V + QQ+ L+ + V + DR ++++IF A+TRE
Sbjct: 90 KVEELKARFNG-LDVGLVLVDGPVSPV-QQRNLEKEWGVKLLDRTGLILEIFADRARTRE 147
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKK 255
LQ+ +A L Y R R + T++ +G +++ R + E+ ++++
Sbjct: 148 GVLQVELAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDEQVIRIRR 205
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L+K+ RE+ R +++ FP VA+VGYTN GK+TL +T D L ++ LFATLD T
Sbjct: 206 QLDKVVKTRELHRASRRKVPFPIVALVGYTNAGKSTLFNRMTGADVLA-KDMLFATLDPT 264
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
LP+ +++ DT+GFIS++PT L+ F+ TLE+ + AD+I+HV D+++P+ +Q
Sbjct: 265 MRGVTLPSGRKVILSDTVGFISDLPTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQA 324
Query: 376 QHVDETLQHLELEEKILEHVLVVGNKVDAVPP-------GERVTEEYDLLISATRGTGLA 428
V E LQ L ++ + + V NK+D V + E +SA G GL
Sbjct: 325 ADVAEILQSLGVKGATPQ--VEVWNKLDLVEGAAHEQLLAQAAKSETIFALSALTGEGLP 382
Query: 429 QLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEH 479
L E V + + +T+ + G WL V+ E +T H
Sbjct: 383 DLLEAVSATFDEEKTERQLTLGF-ADGRRRAWLHAEGVVTG--EAETEEGH 430
>gi|356564314|ref|XP_003550400.1| PREDICTED: GTPase HflX-like [Glycine max]
Length = 529
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 200/405 (49%), Gaps = 35/405 (8%)
Query: 49 ESKALVKFSDNSQDDLEESDEFKTIRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRD 108
E+KA K +DD+ + FK L +VF + ++ ++ +N +D
Sbjct: 78 ENKATTKLRKKKEDDVVSDNRFK----------LRNGREVFEEKAYLVGVER--KNDVQD 125
Query: 109 FMLAESKALVSSI---QGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVF 165
F + ES + +S + G VV ST L S + +++ G G + +K + T +F
Sbjct: 126 FGIEESLSELSQLVDTAGLLVVGSTYQKLTSPNPRTYIGSGKVSEIKSAIHALGVETVIF 185
Query: 166 VSVDVLKLHQQKMLQDLF--QVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY----- 218
D L Q + L+ +F V V DR +++ IF A T EA LQ+++A++ Y
Sbjct: 186 D--DELSAGQLRNLEKIFGGDVRVCDRTALILDIFNQRAATHEASLQVSLAQMEYQLPRL 243
Query: 219 --LWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
+WT + + ++ + +L + LKK L ++ R+ RN++
Sbjct: 244 TKMWTHLERQAGGKVKGMGEKQIEVDKRILRNQIGILKKELESVRKHRKQYRNRRFSVPV 303
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
V++VGYTN GK+TL+ LT D L ++LFATLD TT + N L DT+GFI
Sbjct: 304 AVVSLVGYTNAGKSTLLNQLTGADVLA-EDKLFATLDPTTRRVQMKNGKEFLLTDTVGFI 362
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
+PTTL+ F+ TLE+ + +++HVVD+S+P QQ VD+ L L++ L
Sbjct: 363 QKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQINAVDKVLSELDVSSI---PKL 419
Query: 397 VVGNKVDAVPPGERVTEEYD-----LLISATRGTGLAQLKEKVQD 436
+V NKVD V +++ E + + ISA G GL + VQD
Sbjct: 420 IVWNKVDKVGDPQKLRLEAEKRDDVVCISALSGNGLQEFCNAVQD 464
>gi|117923594|ref|YP_864211.1| HSR1-like GTP-binding protein [Magnetococcus marinus MC-1]
gi|347602422|sp|A0L4B2.1|HFLX_MAGSM RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|117607350|gb|ABK42805.1| GTP-binding protein, HSR1-related protein [Magnetococcus marinus
MC-1]
Length = 432
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 202/395 (51%), Gaps = 27/395 (6%)
Query: 118 VSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQK 177
+S+ G V + ++SL ++FG G +E L R++ D V V L QQ+
Sbjct: 36 LSTTAGLEVHATQLLSLQKAVPATYFGSGQVEELARRIEEDE--IDVAVVNHALTPIQQR 93
Query: 178 MLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKG 237
L+ V DR ++++IF A A+TRE +Q+ +A L ++ + R + T++ +G
Sbjct: 94 NLEKKLNAKVVDRTGLILEIFAARARTREGIMQVELASL--MYQQSRLVRSWTHLERQRG 151
Query: 238 F-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTN 286
++ R ++ ER KLKK L +++ R + R +Q TVA+VGYTN
Sbjct: 152 GVGLRGGPGERQIEVDRRLIRERIHKLKKQLEEVERTRALQRQPRQDIPLFTVALVGYTN 211
Query: 287 CGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEP 346
GK+TL LT L ++LFATLD T LP+ RIL DT+GFI +P L+
Sbjct: 212 AGKSTLFNLLTRAGVLA-EDKLFATLDPTMRAVDLPDGGRILLSDTVGFIRQLPHQLVAA 270
Query: 347 FKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP 406
FK TLE+ M AD+++HVVD+S+P++ + + V+ LQ LE++ L V NK+D +
Sbjct: 271 FKATLEEVMSADMLLHVVDLSDPEWERYVESVNGVLQELEVQHT---RTLTVYNKIDRLE 327
Query: 407 PG---ERVTEEYDLL-ISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLM 462
ER D + +SA G G+ L +++ + +A R + + V G +WL
Sbjct: 328 SRGILERELARGDTIGVSAQTGEGVEPLLSELRRAVGRAMLRYEVILPVSDG----RWLA 383
Query: 463 KHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHE 497
K A +++ E + L V + ++ + + E
Sbjct: 384 KFHAEASVVEVREGEDFTTLIVELAPAVLGRLQGE 418
>gi|313900005|ref|ZP_07833505.1| GTP-binding protein HflX [Clostridium sp. HGF2]
gi|312955057|gb|EFR36725.1| GTP-binding protein HflX [Clostridium sp. HGF2]
Length = 417
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 195/388 (50%), Gaps = 24/388 (6%)
Query: 133 SLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYM 192
+L S +++ G G E + ++ + + V + D+ L Q + L+++ Q PV DR
Sbjct: 39 NLKSITLRTYIGTGKCEEIHAYLQ-EQEIQRVVFNHDLSPL-QIRNLEEILQTPVMDRTE 96
Query: 193 IVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRM 244
+++ IF++ A TR ARLQI A+L L R R N + L+ R
Sbjct: 97 LILAIFESRAVTRTARLQIECAQLKKLLPRLIGANTQLGRQSGSGKNKGAGEKQLELDRR 156
Query: 245 VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKAL-------T 297
+ R Q+L++ L K++ QR R +Q+ P V++VGYTN GK+T++ L
Sbjct: 157 RINARIQELQRELKKIEAQRFNQRRARQKSMLPLVSLVGYTNAGKSTIMNMLLEHSSPYE 216
Query: 298 DDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLA 357
+D ++ ++ LFATLD + LP+ L DT+GF+SN+P L+E F TLE+ A
Sbjct: 217 EDKKVLEKDMLFATLDTSIRHIDLPDGKSFLLSDTVGFVSNLPHDLVEAFHSTLEEVQYA 276
Query: 358 DIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDL 417
+++ VVDVS+ +Y +Q + ETLQ ++ + + + V NK D +DL
Sbjct: 277 SLLVQVVDVSSEEYARQMEITQETLQQIKAADIPM---ITVYNKCDQSGYQYPQVHAHDL 333
Query: 418 LISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSA 477
+SA GL +L + + + + + + G Y LMKH V + R D+
Sbjct: 334 YMSAKEKAGLQELLDLIHSHLYPDEKHVELHIPYQQTGI-YSLLMKHAHVIS-RRDEEDG 391
Query: 478 EHLLLDVVMTDVIMNKFKHEFISSRKRG 505
H LD V++D + K+++ I ++ G
Sbjct: 392 IH--LDAVLSDTLYQKYRNYVICLKEEG 417
>gi|389579846|ref|ZP_10169873.1| GTP-binding protein HflX [Desulfobacter postgatei 2ac9]
gi|389401481|gb|EIM63703.1| GTP-binding protein HflX [Desulfobacter postgatei 2ac9]
Length = 538
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 176/331 (53%), Gaps = 29/331 (8%)
Query: 125 RVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLF 183
+VV S I D K GKG L EL+ + ++ A + V L Q + + D
Sbjct: 220 KVVGSAIQQRKKIDPKFVVGKGKLSELIIKAIQNYA---TLLVFDQELSPSQIRSITDFV 276
Query: 184 QVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--------MNIT 235
++ V DR +++ IF AK+ E + Q+ +A+L Y+ R T A +
Sbjct: 277 EMKVIDRTQLILDIFAKQAKSSEGKYQVELAQLEYMLPRLITKNTAMSRLTGGIGGRGPG 336
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ R ER +LKK + K++ QR+ + +++R+ P +++VGYTN GK+TL+
Sbjct: 337 ETKLEVNRRRARERITRLKKEIEKIRKQRKQQKARRKRKDLPVISIVGYTNAGKSTLLNT 396
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT S++ N+LFATLD ++ P ++ DT+GFI N+P LLE F TLE+
Sbjct: 397 LTQS-SIIAANRLFATLDPSSRRLRFPRDKEVIITDTVGFIQNLPKELLEAFHATLEELE 455
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEY 415
AD+I+HV+D+SNP Y+QQK+ VD+ L+ L L KI L V NK+D + +
Sbjct: 456 QADVILHVIDISNPRYMQQKETVDQLLKSLNL-NKI--PTLYVFNKMD-----QADLSNF 507
Query: 416 D--------LLISATRGTGLAQLKEKVQDMI 438
D +L+SA LA L EK++ M+
Sbjct: 508 DSPWLLNQGILVSALEKASLAPLVEKLEAMV 538
>gi|441513628|ref|ZP_20995456.1| GTP-binding protein HflX [Gordonia amicalis NBRC 100051]
gi|441451574|dbj|GAC53417.1| GTP-binding protein HflX [Gordonia amicalis NBRC 100051]
Length = 484
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 185/351 (52%), Gaps = 30/351 (8%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G +V+D+ I D ++ G G + L+ V T + L Q L+ +
Sbjct: 94 GSQVLDAVIQRRSKPDSATYIGSGKADELREIVLSTGADTVICDGE--LTPAQLTALEKV 151
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNI 234
+V V DR +++ IF HA +RE + Q+++A++ Y+ R R ++ N
Sbjct: 152 VKVKVIDRTALILDIFAQHATSREGKAQVSLAQMEYMLPRLRGWGESMSRQAGGRAGSNG 211
Query: 235 TKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
G +++ R + ER KL++ + +K R R + R P++ V GYTN
Sbjct: 212 GVGLRGPGETKIETDRRRIRERMAKLRREIRDMKKARTTKRAARHRSSIPSITVAGYTNA 271
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GK++L+ A+T LV ++ LFATLD TT L + +++ DT+GF+ ++PT L+E F
Sbjct: 272 GKSSLVNAMTGAGVLV-QDALFATLDPTTRRATLDDGRAVVFTDTVGFVRHLPTQLVEAF 330
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKI-LEHVLVVGNKVDAVP 406
+ TLE+ + AD+++HVVD S+P ++Q V + + + EEK+ L+V NK+DA+
Sbjct: 331 RSTLEEVVDADLLLHVVDGSDPFPMEQISAVRQVIGEIVAEEKVEAPPELLVINKIDAI- 389
Query: 407 PGERVTE------EYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
G R+TE + +SA G GL +L ++V++ + GR+++ + +
Sbjct: 390 DGNRLTELRGAVGADAVFVSARTGEGLPELFDRVREFV----GREDVELTI 436
>gi|409390137|ref|ZP_11241908.1| GTP-binding protein HflX [Gordonia rubripertincta NBRC 101908]
gi|403199964|dbj|GAB85142.1| GTP-binding protein HflX [Gordonia rubripertincta NBRC 101908]
Length = 485
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 184/351 (52%), Gaps = 30/351 (8%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G +V+D+ I D ++ G G E L+ V T + L Q L+ +
Sbjct: 95 GSQVLDALIQRRSKPDSATYIGSGKAEELREIVLATGADT--VICDGELTPAQLTALEKV 152
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNI 234
+V V DR +++ IF HA +RE + Q+++A++ Y+ R R ++ N
Sbjct: 153 VKVKVIDRTALILDIFAQHATSREGKAQVSLAQMEYMLPRLRGWGESMSRQAGGRAGSNG 212
Query: 235 TKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
G +++ R + ER KL++ + +K R R + R P++ V GYTN
Sbjct: 213 GVGLRGPGETKIETDRRRIRERMAKLRREIRDMKKARTTKRAARNRSAIPSITVAGYTNA 272
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GK++L+ A+T LV ++ LFATLD TT L + +++ DT+GF+ ++PT L+E F
Sbjct: 273 GKSSLVNAMTGAGVLV-QDALFATLDPTTRRATLDDGRAVVFTDTVGFVRHLPTQLVEAF 331
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKI-LEHVLVVGNKVDAVP 406
+ TLE+ + AD+++HVVD S+P ++Q V + + + EEK L+V NK+DA+
Sbjct: 332 RSTLEEVVDADLLLHVVDGSDPFPMEQISAVRQVISEIVAEEKAEAPPELLVINKIDAI- 390
Query: 407 PGERVTE------EYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
G R+TE + +SA G GL +L ++V++ + GR+++ + +
Sbjct: 391 DGNRLTELRGAVGADAVFVSARTGEGLPELFDRVREFV----GREDVELTI 437
>gi|453382651|dbj|GAC82946.1| GTPase HflX [Gordonia paraffinivorans NBRC 108238]
Length = 480
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 182/351 (51%), Gaps = 30/351 (8%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G +V+D+ I D ++ G G + L+ V T V L Q L+ +
Sbjct: 90 GSQVLDAVIQRRSKPDPATYIGSGKADELREIVLSSGADTVVCDGE--LTPAQLTALEKV 147
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNI 234
+V V DR +++ IF HA +RE + Q+++A++ Y+ R R ++ N
Sbjct: 148 VKVKVIDRTALILDIFAQHASSREGKAQVSLAQMEYMLPRLRGWGESMSRQAGGRAGSNG 207
Query: 235 TKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
G +++ R + ER KL++ + +K R R + R P++ V GYTN
Sbjct: 208 GVGLRGPGETKIETDRRRIRERMAKLRREIRDMKKARTTKRAARNRSSIPSITVAGYTNA 267
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GK++L+ A+T LV ++ LFATLD TT L + +++ DT+GF+ ++PT L+E F
Sbjct: 268 GKSSLVNAMTGAGVLV-QDALFATLDPTTRRATLDDGRAVVFTDTVGFVRHLPTQLVEAF 326
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKI-LEHVLVVGNKVDAVP 406
+ TLE+ + AD+++HVVD S+P + Q V + + + EE + L+V NK+DA+
Sbjct: 327 RSTLEEVVDADLLLHVVDASDPFPMDQISAVRQVINEIVAEEGVDAPPELLVINKIDAI- 385
Query: 407 PGERVTE------EYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
G R+TE + +SA G GL +L ++V++ + GR ++ M +
Sbjct: 386 DGNRLTELRGAVGADAVFVSARTGEGLPELFDRVREFV----GRGDVEMTI 432
>gi|326791286|ref|YP_004309107.1| GTP-binding proten HflX [Clostridium lentocellum DSM 5427]
gi|326542050|gb|ADZ83909.1| GTP-binding proten HflX [Clostridium lentocellum DSM 5427]
Length = 418
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 176/330 (53%), Gaps = 24/330 (7%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V+ + L + + G G +E +K + VF D L Q + L +
Sbjct: 41 GGEVITQVLQRLDHINPGFYIGSGKVEEIKEMAQLHGATGIVFD--DELSPIQMRNLAEA 98
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDS- 241
Q+ V DR M+++ IF + A ++E +LQ+ +A+L Y +R I T ++ G + S
Sbjct: 99 LQIKVMDRTMVILDIFASRALSKEGKLQVEMAQLKYQSSR--LIGFGTMLSRQAGGIGSR 156
Query: 242 ----KRMVLMEREQK-----LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTL 292
K++ L +R K L+ L +++ R+++R+++ + P VA+VGYTN GK+TL
Sbjct: 157 GPGEKKLELDKRHLKVRMEILQAELAEVEKHRQLIRSRRDKNNTPVVAIVGYTNAGKSTL 216
Query: 293 IKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLE 352
+ L+ D V +NQLFATLD TT LP+ IL DT+GFI +P L++ F TLE
Sbjct: 217 LNQLSGSDVYV-QNQLFATLDPTTRGITLPSGSEILLTDTVGFIRKLPHHLVKAFYSTLE 275
Query: 353 DAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA----VPPG 408
+A ADII+HV+DVS+P +Q V ETL L++ + ++ V NK+D P
Sbjct: 276 EAKYADIILHVMDVSSPHLETHQQVVYETLSRLQISDI---PIVAVYNKIDTHVEDYPKD 332
Query: 409 ERVTEEYDLLISATRGTGLAQLKEKVQDMI 438
E T Y+ ISA G G L +++++
Sbjct: 333 EHAT--YETYISAKEGIGCEHLLSVLEEIL 360
>gi|365854975|ref|ZP_09395037.1| GTP-binding protein HflX [Acetobacteraceae bacterium AT-5844]
gi|363719638|gb|EHM02940.1| GTP-binding protein HflX [Acetobacteraceae bacterium AT-5844]
Length = 434
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 194/384 (50%), Gaps = 34/384 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
L +SI G +V S L + + G+G +E K ++ + +V V V + + Q
Sbjct: 44 GLAASI-GLTIVHSAAFPLRTRRPSTLLGEGQVEAAKLEIE-EHQVGVVVVDAALTPV-Q 100
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN-- 233
Q+ L+ + V DR ++++IF A+TRE LQ+ +A L Y R R + T++
Sbjct: 101 QRNLERAWGCKVIDRTGLILEIFGERARTREGTLQVELAHLEY--QRTRLVRSWTHLERQ 158
Query: 234 ---------ITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGY 284
+ ++ R ++ ER KLKK L +++ R + R + R FP VA+VGY
Sbjct: 159 RGGFGFLGGPGESQIEIDRRLIGERIVKLKKELEQVRRTRGLHRAARTRVPFPVVALVGY 218
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
TN GK+TL ALT + ++QLFATLD T LP+ ++ DT+GFIS++PT L+
Sbjct: 219 TNAGKSTLFNALTGA-GVYAQDQLFATLDPTMRAIKLPSGRTVILSDTVGFISDLPTQLI 277
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLE------LEEKILEHVLVV 398
E F+ TLE+ ADII+HV DV++PD Q+ V E L+ + L+E + V
Sbjct: 278 EAFRATLEEVAAADIILHVRDVAHPDTASQRSDVMEVLEEMASGPNPTLDENWQGRTIEV 337
Query: 399 GNKVD-----AVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRS 453
NK D AV PG T+ + +SA G GL L+ + A G + + +
Sbjct: 338 LNKADLLGGIAVVPG---TDAAAIAVSALTGEGLDALRAALDAR--LAAGMETVEYALPP 392
Query: 454 G-GSEYQWLMKHTAVSNIREDDTS 476
G+ WL +H V + + D S
Sbjct: 393 ADGARIAWLYQHGEVLSRADGDDS 416
>gi|383649571|ref|ZP_09959977.1| HSR1-like GTP-binding protein [Sphingomonas elodea ATCC 31461]
Length = 430
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 191/377 (50%), Gaps = 30/377 (7%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E+ L ++I G VV+ + L + G G +E L VR AVF +
Sbjct: 36 LEETAGLAAAI-GVDVVERVAVRLRQPKPGTLIGSGQVEALAETVRDGELQLAVFDAA-- 92
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT-- 221
L QQ+ L+ V DR ++++IF A+T E RLQ+ +A L Y WT
Sbjct: 93 LTPVQQRNLETALGCKVIDRTGLILEIFGERARTAEGRLQVELAHLDYQAGRLVRSWTHL 152
Query: 222 -RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
R R + +++ R ++ +R +L++ L+++ R + R+++QR +P VA
Sbjct: 153 ERQRGGF-GFLGGPGETQIEADRRLIRDRMARLRRELDQVSRTRTLHRDRRQRAPWPVVA 211
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+VGYTN GK+TL LT + ++ N LFATLD T + LP + + DT+GF+S +P
Sbjct: 212 LVGYTNAGKSTLFNRLTGAE-VMAENLLFATLDPTLRQISLPGIDKAILSDTVGFVSELP 270
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
T L+ FK TLE+ + AD++IHV D+++PD Q+ V++ LQ + + E N
Sbjct: 271 TQLVAAFKATLEEVVSADLLIHVRDIAHPDTEAQRVDVEKVLQEIGVSEHTPR--FEAWN 328
Query: 401 KVD---------AVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
K+D A+ R T+E +ISA G G+ L E V + + G + T+R+
Sbjct: 329 KLDLLDDEQREEALAIAARRTDEVR-VISALTGEGVDALVEGVAGRLTE--GHRRYTLRL 385
Query: 452 RSG-GSEYQWLMKHTAV 467
G+ WL +H V
Sbjct: 386 DPADGAGAAWLHQHGDV 402
>gi|148255461|ref|YP_001240046.1| GTP-binding protein (hflX) [Bradyrhizobium sp. BTAi1]
gi|146407634|gb|ABQ36140.1| GTP-binding protein HflX [Bradyrhizobium sp. BTAi1]
Length = 459
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 204/409 (49%), Gaps = 37/409 (9%)
Query: 88 VFVVQPFIKW-----GKKMKRNTTRDF--MLAESKALVSSIQGWRVVDSTIISLLSFDKK 140
V VV P+++ G + RDF + E+ L +I V ++ + +
Sbjct: 24 VVVVGPYLRARRGDDGAQASHADMRDFEARIDEAAGLARAID-LTVTEAILAPIAQIRPA 82
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
++ GKG ++ + + G A V +D L QQ+ L+ + V DR ++++IF
Sbjct: 83 TYLGKGKVDEIAGVIAGQG---AELVVMDCALSPIQQRNLEKAWNTKVLDRTGLILEIFG 139
Query: 200 AHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLME 248
AKT+E LQ+ +A L Y R R + T++ +G +++ R ++ +
Sbjct: 140 RRAKTKEGALQVELAHLNY--QRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLIGD 197
Query: 249 REQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQL 308
R +L+ L K++ R + R +QR + VA+VGYTN GK+TL LT D + + L
Sbjct: 198 RITRLENELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRAD-VQAADML 256
Query: 309 FATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSN 368
FATLD T LP+ + + DT+GFISN+PT L+ F+ TLE+ + AD+I+HV D+S+
Sbjct: 257 FATLDPTLRAITLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEADVILHVRDMSH 316
Query: 369 PDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD----------AVPPGERVTEEYDLL 418
D Q+ V+ L L ++ + + ++ V NK+D A R E LL
Sbjct: 317 EDAEAQQHDVELVLGQLGIDPEATDTIIEVWNKIDRLDEAARENLANIASRRPPERPCLL 376
Query: 419 ISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
+SA G G+ L + ++D + A ++T+ + G+ WL ++ V
Sbjct: 377 VSAHTGEGVDALLQAIEDRLAAARTTLDLTIDA-ADGAGISWLHRNAEV 424
>gi|404258507|ref|ZP_10961826.1| GTP-binding protein HflX [Gordonia namibiensis NBRC 108229]
gi|403403021|dbj|GAC00236.1| GTP-binding protein HflX [Gordonia namibiensis NBRC 108229]
Length = 485
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 184/351 (52%), Gaps = 30/351 (8%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G +V+D+ I D ++ G G E L+ V T + L Q L+ +
Sbjct: 95 GSQVLDALIQRRSKPDSATYIGSGKAEELREIVLATGADTVICDGE--LTPAQLTALEKV 152
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNI 234
+V V DR +++ IF HA +RE + Q+++A++ Y+ R R ++ N
Sbjct: 153 VKVKVIDRTALILDIFAQHATSREGKAQVSLAQMEYMLPRLRGWGESMSRQAGGRAGSNG 212
Query: 235 TKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
G +++ R + ER KL++ + +K R R + R P++ V GYTN
Sbjct: 213 GVGLRGPGETKIETDRRRIRERMAKLRREIRDMKKARTTKRAARNRSAIPSITVAGYTNA 272
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GK++L+ A+T LV ++ LFATLD TT L + +++ DT+GF+ ++PT L+E F
Sbjct: 273 GKSSLVNAMTGAGVLV-QDALFATLDPTTRRATLDDGRAVVFTDTVGFVRHLPTQLVEAF 331
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKI-LEHVLVVGNKVDAVP 406
+ TLE+ + AD+++HVVD S+P ++Q V + + + EEK L+V NK+DA+
Sbjct: 332 RSTLEEVVDADLLLHVVDGSDPFPMEQISAVRQVISEIVAEEKAEAPPELLVINKIDAI- 390
Query: 407 PGERVTE------EYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
G R+TE + +SA G GL +L ++V++ + GR+++ + +
Sbjct: 391 DGNRLTELRGAVGADAVFVSARTGEGLPELFDRVREFV----GREDVELTI 437
>gi|56962534|ref|YP_174260.1| GTPase [Bacillus clausii KSM-K16]
gi|56908772|dbj|BAD63299.1| GTPase [Bacillus clausii KSM-K16]
Length = 420
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 198/397 (49%), Gaps = 22/397 (5%)
Query: 92 QPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELL 151
QP I G +++++T + + E L ++ +VV L ++ ++ G G L
Sbjct: 6 QPTIIVGVELQKDTDFHYSMEELNNLADALD-LQVVGQLTQKLPVPNQATYIGAGKASEL 64
Query: 152 KRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQI 211
VF D L Q + L+ L +V V+DR M+++ IF AKT+EA+LQ+
Sbjct: 65 SMMCESLGATLVVFN--DELSPSQIRNLEKLLEVTVYDRTMLILDIFGERAKTKEAQLQV 122
Query: 212 AIAELPYLWTRYRTIEDA-----------TNMNITKGFLDSKRMVLMEREQKLKKALNKL 260
+A L YL R + + N + L+ R + R L+K L ++
Sbjct: 123 EMARLRYLLPRLVGMRASLSRQGGSGTGLANRGAGETKLELDRRKIEARIHALEKDLEEI 182
Query: 261 KGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDS---LVPRNQLFATLDVTTH 317
+RE+ R ++++Q P VA+VGYTN GK++L+ A+ D+ + ++ LFATLD +
Sbjct: 183 VKRRELQRKRRKKQALPVVALVGYTNAGKSSLMNAMLDNAEEKRVFEKDMLFATLDTSVR 242
Query: 318 EGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQH 377
+ L +L DT+GF+S +PT L++ F+ TLE+A AD+++HVVD SN + + +
Sbjct: 243 KVELDKNHSVLLADTVGFVSKLPTHLVKAFRSTLEEAREADLLLHVVDYSNERHREMAKT 302
Query: 378 VDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDM 437
+ETLQ +E++ + + V NK+D + +L ISA GL L +K+
Sbjct: 303 TNETLQAMEIDRPM----IYVYNKMDRLKEAFPQAHGDELFISAKTKQGLDLLAQKIASY 358
Query: 438 ILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDD 474
+ + + + R G + +L H V R ++
Sbjct: 359 VFQDLEKHLFIVPYRDGEAA-AYLNNHAHVHTQRAEE 394
>gi|385652520|ref|ZP_10047073.1| GTPase [Leucobacter chromiiresistens JG 31]
Length = 537
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 174/340 (51%), Gaps = 32/340 (9%)
Query: 118 VSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQ 176
++ G RV+D + D ++ GKG + L V A V A V D L Q+
Sbjct: 146 LAETAGARVLDGLLQRRAHPDPATYLGKGKAQELAELV---AAVGADTVIADTELAPSQR 202
Query: 177 KMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI-- 234
+ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 203 RALEDVVKVKVIDRTAVILDIFSQHAKSREGKAQVELAQLQYLLPRLRGWGESMSRQAGG 262
Query: 235 ----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
TK LD +++ + R KL+K + RE R ++R + P+
Sbjct: 263 QVGSGGAGMGSRGPGETKMELDRRKIHI--RMSKLRKQIAGFAPAREAKRANRKRGEVPS 320
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+ GYTN GK++L+ LT LV +NQLFATLD G + R Y DT+GF+ N
Sbjct: 321 VAIAGYTNAGKSSLLNRLTGTQELV-QNQLFATLDTAIRHGETDDGRRFTYADTVGFVRN 379
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+P L+E F+ T E+ A +I+HVVD S+PD Q + V + + +E ++ I E LV
Sbjct: 380 LPHQLVEAFRSTFEEVGDASVILHVVDGSHPDPEAQLRTVRDVIAEVEAQD-ITE--LVA 436
Query: 399 GNKVDAVPPGERVTEEY----DLLISATRGTGLAQLKEKV 434
NK D + +R+ + +SA G G+ +LK ++
Sbjct: 437 FNKADLLDDSQRLMLHGLVPDAVFVSARTGEGIEELKRRI 476
>gi|85708673|ref|ZP_01039739.1| GTPase [Erythrobacter sp. NAP1]
gi|85690207|gb|EAQ30210.1| GTPase [Erythrobacter sp. NAP1]
Length = 432
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 196/393 (49%), Gaps = 39/393 (9%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
LAE++ L +I G + S I+ + + FG G +E +K + + + +
Sbjct: 30 LAEAEGLALAI-GVAIEHSEILPVRQMQPNTLFGSGQVENIK--ILCEQHECELVIVDGA 86
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
L QQ+ L+D + V DR ++++IF A T E RLQ+ +A L Y + R + T
Sbjct: 87 LTPIQQRNLEDKLKRKVIDRTGLILEIFGERAATAEGRLQVELAHLDY--QQSRLVRSWT 144
Query: 231 NMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +G +++ R ++ +R +L++ L +++ R + R ++ R +P +
Sbjct: 145 HLERQRGGFGFLGGPGETQIEADRRMIRQRMGRLRRELEQVRKTRTLHRERRGRAPWPVI 204
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL LT + ++ + LFATLD T LP + + DT+GFIS++
Sbjct: 205 ALVGYTNAGKSTLFNRLTGAE-VMAEDLLFATLDPTMRAISLPGVEKAILSDTVGFISDL 263
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL--------ELEEKI 391
PT L+ F+ TLE+ ADII HV D++NP + QK+ V E L L E E I
Sbjct: 264 PTQLVAAFRATLEEVTGADIICHVRDMANPAHSAQKKQVMEVLSDLGVVDAESGESEIPI 323
Query: 392 LEHVLVVGNKVDAVPPG------ERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRK 445
LE V NK D + E + +L+SA+ G G+ +K+ DM+ +
Sbjct: 324 LE----VWNKADLLSEDTLTELREAAAGQDAVLLSASSGEGVEAFADKIADMLTASAKEV 379
Query: 446 NITMRVRSGGSEYQWLMKHTAVSNIREDDTSAE 478
IT+ S G WL H ++ ED + E
Sbjct: 380 TITLPA-SDGRRLAWLHAH---GDVLEDCDAGE 408
>gi|310815879|ref|YP_003963843.1| GTP-binding protein HflX [Ketogulonicigenium vulgare Y25]
gi|385233393|ref|YP_005794735.1| GTP binding protein-like protein [Ketogulonicigenium vulgare
WSH-001]
gi|308754614|gb|ADO42543.1| GTP-binding protein HflX [Ketogulonicigenium vulgare Y25]
gi|343462304|gb|AEM40739.1| GTP binding protein-like protein [Ketogulonicigenium vulgare
WSH-001]
Length = 432
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 190/368 (51%), Gaps = 28/368 (7%)
Query: 85 DHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFG 144
D ++V P IK + R D L E+KAL ++ G V+ + I+ L FG
Sbjct: 8 DTPAWIVHPEIK--SDVSRREA-DAALDEAKALADALPGLDVLGAEIVRLPKVHAGMLFG 64
Query: 145 KGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKT 204
G ++ LK ++ V V + L QQ+ L+ + V + DR ++++IF A+T
Sbjct: 65 SGKVQELKERITAHG-VKLVLID-GALSPVQQRNLEREWGVKILDRMSLILEIFSDRART 122
Query: 205 REARLQIAIAELPYLWTRYRTIEDATNMNITKGFL-----------DSKRMVLMEREQKL 253
RE LQ+ IA L Y R R + T++ +G ++ R + E+ +L
Sbjct: 123 REGVLQVEIAALSY--QRTRLVRAWTHLERQRGGFGFVGGPGETQRENDRRAIDEQLLRL 180
Query: 254 KKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLD 313
++ L K++ R + R + + +P VA+VGYTN GK++L +T D L ++QLFATLD
Sbjct: 181 ERQLEKVQKTRALHRAARAKVPYPIVALVGYTNAGKSSLFNRVTGADVLA-KDQLFATLD 239
Query: 314 VTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQ 373
T LP+ ++ DT+GFIS++PT L+ F+ TLE+ + AD+I+HV D+S+P Q
Sbjct: 240 PTMRRLTLPDGQEVIMSDTVGFISDLPTQLVAAFRATLEEVLEADLILHVRDISHPQTAQ 299
Query: 374 QKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER-------VTEEYDLLISATRGTG 426
Q + V + L + + E +L V NK+D + R ++ + +SA G G
Sbjct: 300 QARDVMQILHQIGVPEDA--PMLEVLNKIDLLDEAGREAFQTEAARKDAKIAVSALTGEG 357
Query: 427 LAQLKEKV 434
+ L E++
Sbjct: 358 VEALLEQI 365
>gi|428780266|ref|YP_007172052.1| GTP-binding protein HflX [Dactylococcopsis salina PCC 8305]
gi|428694545|gb|AFZ50695.1| GTP-binding protein HflX [Dactylococcopsis salina PCC 8305]
Length = 568
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 173/316 (54%), Gaps = 25/316 (7%)
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIF 198
++ G G +E + V+ V A V+ D L Q + L+ V V DR +++ IF
Sbjct: 258 QTVIGAGKVEEIAIAVQ---TVGASLVTFDQDLSPAQARNLEQQIGVRVIDRTELILDIF 314
Query: 199 KAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMERE 250
A++R +LQ+ +A+L YL R R + L+++R + +R
Sbjct: 315 AQRARSRAGKLQVELAQLEYLLPRLVGRGEAMSRLGGGIGTRGPGETKLETERRRIQKRV 374
Query: 251 QKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFA 310
+L++ +N+L+ R MR ++Q+Q+ PTVAVVGYTN GK+TL+ LT+ D + +QLFA
Sbjct: 375 SRLQQEVNQLQSHRSRMRQQRQKQEVPTVAVVGYTNAGKSTLLNHLTNAD-IYAEDQLFA 433
Query: 311 TLDVTTHEGMLPNRLR---ILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
TLD TT +P + +L DT+GFI +P +L++ F+ TLE+ AD I+HVVD+S
Sbjct: 434 TLDPTTRRLSVPIQEELQTVLLTDTVGFIRELPPSLIDAFRATLEEVSEADAILHVVDLS 493
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD-----LLISAT 422
+P + Q Q V + L+ + + L+V NK+D V E +TE D + ISA
Sbjct: 494 HPAWKSQIQSVSQILEEMPITPP---DSLLVFNKLDQV-DNETLTEAKDSFPSAVFISAQ 549
Query: 423 RGTGLAQLKEKVQDMI 438
+ GL L+EK+ MI
Sbjct: 550 KRLGLETLREKIGKMI 565
>gi|296535545|ref|ZP_06897727.1| GTP-binding protein HflX [Roseomonas cervicalis ATCC 49957]
gi|296264131|gb|EFH10574.1| GTP-binding protein HflX [Roseomonas cervicalis ATCC 49957]
Length = 393
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/380 (32%), Positives = 190/380 (50%), Gaps = 32/380 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
L +SI G +V S + L + + G+G +E+ + + ++ V V + + Q
Sbjct: 2 GLAASI-GLTIVHSAVFPLRNRRPSTLLGEGQVEMAAEAIE-ENQIGVVVVDAALTPV-Q 58
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN-- 233
Q+ L+ + V DR ++++IF A+T+E LQ+ +A L Y R R + T++
Sbjct: 59 QRNLERQWHCKVIDRTGLILEIFGERARTKEGTLQVELAHLEY--QRTRLVRSWTHLERQ 116
Query: 234 ---------ITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGY 284
+ ++ R ++ ER KLK+ L +++ R + R + R FP VA+VGY
Sbjct: 117 RGGFGFLGGPGESQIEIDRRLIGERIVKLKRELEQVRRTRGLHRAARTRVPFPVVALVGY 176
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
TN GK+TL ALT + ++QLFATLD T LP+ ++ DT+GFIS++PT L+
Sbjct: 177 TNAGKSTLFNALTGA-GVYAQDQLFATLDPTMRAIRLPSGRTVILSDTVGFISDLPTQLI 235
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETL------QHLELEEKILEHVLVV 398
E F+ TLE+ ADII+HV DV++PD Q+ V L +H L+E + V
Sbjct: 236 EAFRATLEEVAAADIILHVRDVAHPDTTAQRNDVVGVLSEMAKGEHPTLDENWPARTIEV 295
Query: 399 GNKVD-----AVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRS 453
NK D A PG + + + +SA G GL L+ + D L A S
Sbjct: 296 LNKADLLGGIAEVPG--LDDAASVAVSALTGEGLDALRSAL-DARLAAGMEIADYALPPS 352
Query: 454 GGSEYQWLMKHTAVSNIRED 473
G+ WL +H V RED
Sbjct: 353 DGARIAWLYQHGEVLT-RED 371
>gi|184201224|ref|YP_001855431.1| putative GTP-binding protein HflX [Kocuria rhizophila DC2201]
gi|183581454|dbj|BAG29925.1| putative GTP-binding protein HflX [Kocuria rhizophila DC2201]
Length = 552
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 180/353 (50%), Gaps = 35/353 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D + ++ D ++ G G LK V A A V VD L
Sbjct: 143 AALAETAGSEVMDGMLQRRVNPDPGTYLGSGKALELKDVV---AATGADTVIVDAELAPS 199
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIED------ 228
Q++ L+D+ +V V DR +++ IF HAK++E + Q+ +A+L Y+ R R +
Sbjct: 200 QRRALEDVVKVKVIDRTGLILDIFAQHAKSKEGKAQVELAQLEYMLPRLRGWGESLSRQA 259
Query: 229 ----ATNMNI-------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
A+ I TK LD +R + +R KL++ + +K RE R ++R P
Sbjct: 260 GGRAASGEGIGSRGPGETKIELDRRR--IRQRMAKLRREIAAMKPARETKRLNRRRNAVP 317
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+VA+ GYTN GK++L+ LTD LV N LFATLD T + P+ + DT+GF+
Sbjct: 318 SVAIAGYTNAGKSSLLNRLTDAGVLV-ENALFATLDPTVRKAQTPDGIGYTLADTVGFVR 376
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
++PT L+E F+ TLE+ AD+I+HVVD S+PD Q + V + L + + I E +V
Sbjct: 377 SLPTQLVEAFRSTLEEVADADVIVHVVDASHPDPEGQLKAVRDVLTDVGAND-IPE--IV 433
Query: 398 VGNKVDAVPP----GERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKN 446
NK D P R E + +SA G G+ +L+ MI A R N
Sbjct: 434 ALNKSDIADPVVLARLRNHESPSVAVSARTGEGIEELRR----MISAAIPRPN 482
>gi|144899203|emb|CAM76067.1| GTP-binding protein, HSR1 [Magnetospirillum gryphiswaldense MSR-1]
Length = 437
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 211/423 (49%), Gaps = 38/423 (8%)
Query: 81 ALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKK 140
+ + + VV P IK R+ L E+ L +I VV + ++ +
Sbjct: 8 GIASRQRAMVVHPAIKVADGGLRDPQS--RLDEAVGLTQAID-LDVVAAELVPVSKRRPA 64
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
+ GKG +E L V+ D + V L QQ+ L+ + V DR ++++IF A
Sbjct: 65 TLIGKGAVERLAIIVK-DQDIQVAIVDGH-LSPVQQRNLEKEWACKVIDRTGLILEIFGA 122
Query: 201 HAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMER 249
A+TRE LQ+ +A L Y R R + T++ +G +++ R ++ +R
Sbjct: 123 RARTREGSLQVELAALSY--QRSRLVRSWTHLERQRGGFGFLGGPGETQIEADRRMIGDR 180
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
KLK+ L ++K RE+ R+ ++R +P VA+VGYTN GK+TL LT + L ++ LF
Sbjct: 181 IVKLKRELEEVKRTRELHRSARRRVPYPIVALVGYTNAGKSTLFNRLTQSEVLA-KDMLF 239
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T LP+ +I+ DT+GFIS++P L+ F+ TLE+ + AD+++HV D+++P
Sbjct: 240 ATLDPTMRGLKLPSGRQIILSDTVGFISDLPHELVAAFRATLEEVLEADVVVHVRDMAHP 299
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER-------VTEEYDLLISAT 422
D Q V+ L+ L L + + ++ NK+D +P G R + L ISA
Sbjct: 300 DTEAQASDVELVLKELGLGDMVDRGLVEALNKIDLLPEGGREGVVNQAARKPTALPISAL 359
Query: 423 RGTG----LAQLKEKVQDMILKATGRKNITMRVRSG-GSEYQWLMKHTAVSNIREDDTSA 477
G G LA + EK+ + R I + G G+ W+ ++ V R DD +
Sbjct: 360 TGAGVDAFLACIDEKLSE------NRLIIDVSFDLGDGAAIAWMYRNGEVLE-RSDDDTQ 412
Query: 478 EHL 480
HL
Sbjct: 413 THL 415
>gi|406830260|ref|ZP_11089854.1| GTP-binding proten HflX [Schlesneria paludicola DSM 18645]
Length = 437
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 184/339 (54%), Gaps = 23/339 (6%)
Query: 103 RNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVT 162
R ++ L E K LV + G +VV + + GKG +E LK V DA
Sbjct: 26 RKLGKERALDELKGLVKT-AGVKVVGELVQLRGRPHPGTCLGKGKIEELKDLV--DATGA 82
Query: 163 AVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY---- 218
+ + + L Q + L+ + + DR +++ IF HA++ EARLQ+ +A+L Y
Sbjct: 83 ELIIFDNNLTPSQGRHLELETKRIIVDRSELILDIFATHARSAEARLQVELAQLQYTRTR 142
Query: 219 ---LWTRYRTIEDATNMNITKGF--LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQR 273
+WT IE + G +++ R ++ +R +LK L +++ +RE M +QR
Sbjct: 143 LKRMWTHLERIEGGIGASRGPGEKQIETDRRIIDQRIDELKLRLAEVEVRRERM--VRQR 200
Query: 274 QKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTI 333
+ V+VVGYTN GK+TL+ ALT D V NQLFATLD T + +P+ +L DT+
Sbjct: 201 ESHSLVSVVGYTNAGKSTLMNALTGADVYVA-NQLFATLDTRTRKWTIPSWGELLLSDTV 259
Query: 334 GFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILE 393
GF+ ++P +L+ FK TLE+A AD+++HVVD SNP+ QQ + V++ L + +E I
Sbjct: 260 GFVRDLPHSLVASFKSTLEEARQADLLLHVVDASNPEAEQQAETVEQVLNEIGVE--IRN 317
Query: 394 HVLVVGNKVDAVPPGE-----RVTEEYDLLISATRGTGL 427
++LV+ NKVDAV R + + +SA G GL
Sbjct: 318 YILVL-NKVDAVQDRGVVDVLRAKYAHSVTVSALTGEGL 355
>gi|343926997|ref|ZP_08766485.1| GTP-binding protein HflX [Gordonia alkanivorans NBRC 16433]
gi|343763055|dbj|GAA13411.1| GTP-binding protein HflX [Gordonia alkanivorans NBRC 16433]
Length = 485
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 184/351 (52%), Gaps = 30/351 (8%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G +V+D+ I D ++ G G E L+ V T + L Q L+ +
Sbjct: 95 GSQVLDALIQRRSKPDSATYIGSGKAEELREIVLATGADTVICDGE--LTPAQLTALEKV 152
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNI 234
+V V DR +++ IF HA +RE + Q+++A++ Y+ R R ++ N
Sbjct: 153 VKVKVIDRTALILDIFAQHATSREGKAQVSLAQMEYMLPRLRGWGESMSRQAGGRAGSNG 212
Query: 235 TKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
G +++ R + ER KL++ + +K R R + R P++ V GYTN
Sbjct: 213 GVGLRGPGETKIETDRRRIRERMAKLRREIRDMKKARTTKRAARNRSAIPSITVAGYTNA 272
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GK++L+ A+T LV ++ LFATLD TT L + +++ DT+GF+ ++PT L+E F
Sbjct: 273 GKSSLVNAMTGAGVLV-QDALFATLDPTTRRATLDDGRAVVFTDTVGFVRHLPTQLVEAF 331
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKI-LEHVLVVGNKVDAVP 406
+ TLE+ + AD+++HVVD S+P ++Q V + + + EEK L+V NK+DA+
Sbjct: 332 RSTLEEVVDADLLLHVVDGSDPFPMEQISAVRQVISEVVAEEKAEAPPELLVINKIDAI- 390
Query: 407 PGERVTE------EYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
G R+TE + +SA G GL +L ++V++ + GR+++ + +
Sbjct: 391 DGNRLTELRGAVGADAVFVSARTGEGLPELFDRVREFV----GREDVELTI 437
>gi|221639215|ref|YP_002525477.1| HSR1-like GTP-binding protein [Rhodobacter sphaeroides KD131]
gi|221159996|gb|ACM00976.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides KD131]
Length = 447
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 206/411 (50%), Gaps = 31/411 (7%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ FV+ P I+ + + D LAE+ +L +++ +V ++ L FG G
Sbjct: 33 RAFVLHPDIRTERSRR---LPDLRLAEAVSLAAALPDMEIVGQEVVRLPRAQPGLLFGTG 89
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
+E LK + G V V V V + QQ+ L+ + V + DR ++++IF A+TRE
Sbjct: 90 KVEELKARFNG-LDVGLVLVDGPVSPV-QQRNLEKEWGVKLLDRTGLILEIFADRARTRE 147
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKK 255
LQ+ +A L Y R R + T++ +G +++ R + E+ ++++
Sbjct: 148 GVLQVELAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDEQVIRIRR 205
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L+K+ RE+ R +++ FP VA+VGYTN GK+TL +T D L ++ LFATLD T
Sbjct: 206 QLDKVVKTRELHRASRRKVPFPIVALVGYTNAGKSTLFNRMTGADVLA-KDMLFATLDPT 264
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
LP+ +++ DT+GFIS++PT L+ F+ TLE+ + AD+I+HV D+++P+ +Q
Sbjct: 265 MRGVTLPSGRKVILSDTVGFISDLPTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQA 324
Query: 376 QHVDETLQHLELEEKILEHVLVVGNKVDAVPP-------GERVTEEYDLLISATRGTGLA 428
V E LQ L ++ + + V NK+D V + E +SA G GL
Sbjct: 325 ADVAEILQSLGVKGATPQ--VEVWNKLDLVEGATHEQLLAQAAKSETIFALSALTGEGLP 382
Query: 429 QLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEH 479
L E V + + +T+ + G WL V+ E +T H
Sbjct: 383 DLLEAVSATFDEEKTERQLTVGF-ADGRRRAWLHAEGVVTG--EAETEEGH 430
>gi|83952201|ref|ZP_00960933.1| GTP-binding protein HflX [Roseovarius nubinhibens ISM]
gi|83837207|gb|EAP76504.1| GTP-binding protein HflX [Roseovarius nubinhibens ISM]
Length = 425
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 207/411 (50%), Gaps = 30/411 (7%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ +V+ P I +G+ R+ R L E+ AL ++ G VV S I+ L + FG G
Sbjct: 10 RAWVLHPDI-YGQNDDRDPKR--ALEEAVALGVALPGLDVVGSEIVRLPKPHPGALFGSG 66
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
+E LK ++ + V V + V + QQ+ L+ + + + DR ++++IF A TRE
Sbjct: 67 KIEELKARLEAN-EVDLVLIDGPVTPV-QQRNLEKAWGLKLLDRTGLILEIFSDRAATRE 124
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKK 255
LQ+ +A L Y R R + T++ +G +++ R + ++ +L++
Sbjct: 125 GVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDDQLVRLRR 182
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L K+ R + R + + FP VA+VGYTN GK+TL LT D + ++ LFATLD T
Sbjct: 183 QLEKVVKTRTLHRAARAKVPFPIVALVGYTNAGKSTLFNRLTGSDVMA-KDMLFATLDPT 241
Query: 316 THEGMLPNR-LRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQ 374
+ LP+ ++ DT+GFIS++PT L+ F+ TLE+ + AD+++HV D+S+P+ +Q
Sbjct: 242 MRKVSLPHGGPDVILSDTVGFISDLPTELVAAFRATLEEVVSADLVVHVRDISHPETEEQ 301
Query: 375 KQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT-------EEYDLLISATRGTGL 427
+ V+ L+ L++ E + + NK D + P R T E +L+SA G G+
Sbjct: 302 ARDVEAILESLDVAEGTPR--IELWNKADLLDPEARETFANQAARREEVILVSAVSGEGM 359
Query: 428 AQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAE 478
++ + + IT+ G WL V R+ D E
Sbjct: 360 EAFVDQATEALSGVQHEATITLGF-GEGRRRAWLFDQGVVEAERQTDEGWE 409
>gi|316934207|ref|YP_004109189.1| GTP-binding proten HflX [Rhodopseudomonas palustris DX-1]
gi|315601921|gb|ADU44456.1| GTP-binding proten HflX [Rhodopseudomonas palustris DX-1]
Length = 456
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 129/421 (30%), Positives = 207/421 (49%), Gaps = 38/421 (9%)
Query: 75 DEAQTGALGTDHQVFVVQPFIKW--GKKMKRNTT---RDFMLAESKALVSSIQGWRVVDS 129
D ++G G +V VV P+++ G T D L E+ L +I VV++
Sbjct: 11 DRPRSGQGGETGRVIVVGPYLRARRGDPDAAETAVRDNDARLDEAAGLARAID-LDVVEA 69
Query: 130 TIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVF 188
+ + ++ GKG +E + + A A V +D L QQ+ L+ + V
Sbjct: 70 VLTPISQIRPATYLGKGKVEDIVGLI---AAHGADLVVMDCALSPIQQRNLEKAWNAKVL 126
Query: 189 DRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF---------- 238
DR ++++IF AKTRE LQ+ +A L Y R R + T++ +G
Sbjct: 127 DRTGLILEIFGRRAKTREGTLQVELAHLNY--QRSRLVRSWTHLERQRGGFGFMGGPGET 184
Query: 239 -LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALT 297
+++ R ++ ER KL+ L K++ R + R +QR + VA+VGYTN GK+TL LT
Sbjct: 185 QIEADRRLIGERITKLEAELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLT 244
Query: 298 DDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLA 357
D + + LFATLD T LP+ + + DT+GFISN+PT L+ F+ TLE+ + A
Sbjct: 245 RAD-VQAADMLFATLDPTLRAIQLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEA 303
Query: 358 DIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP---------- 407
D+I+HV D+S+ D Q+ VD L+ L ++ +L V NK+D P
Sbjct: 304 DLILHVRDISHEDAEAQQSDVDNVLRQLGVDAAS-GRILEVWNKIDRFEPEQRDELKNIA 362
Query: 408 GERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG-GSEYQWLMKHTA 466
R + LL+SA G G+ +L ++ + A R + + V + G+ WL ++
Sbjct: 363 ARRPEDHPCLLVSAVSGEGVDELLLAIEQRL--AATRTVLDLSVDAADGAGVSWLHRNAE 420
Query: 467 V 467
V
Sbjct: 421 V 421
>gi|188582188|ref|YP_001925633.1| GTP-binding proten HflX [Methylobacterium populi BJ001]
gi|179345686|gb|ACB81098.1| GTP-binding proten HflX [Methylobacterium populi BJ001]
Length = 471
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 223/457 (48%), Gaps = 38/457 (8%)
Query: 77 AQTGALGTDHQVFVVQPFIKWGKKM----KRNTTR--DFMLAESKALVSSIQGWRVVDST 130
A G + + V+ P++ + + T R + L E+ L ++I V +
Sbjct: 17 APEGEIAAATRTLVLGPYLNRAAQRPVPGQTETVRSDEARLDEAVGLAAAID-LDVARAI 75
Query: 131 IISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDR 190
+ L ++ GKG +E + ++ A + V L QQ+ L+ + V DR
Sbjct: 76 AVHLQRPRPSTYLGKGRVEEVAGLIK--AEEIGLVVMDCALSPVQQRNLEKAWGAKVIDR 133
Query: 191 YMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------L 239
++++IF A TRE LQ+ A L Y + R + T++ +G +
Sbjct: 134 TGLILEIFGRRASTREGTLQVEHAHLAY--QKSRLVRSWTHLERQRGGFGFLGGPGETQI 191
Query: 240 DSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDD 299
++ R ++ ER ++++ L+ + R + R + R +P VA+VGYTN GK+TL ALT
Sbjct: 192 EADRRMIQERMTRIERDLDAVTRTRGLHRKSRARVPYPIVALVGYTNAGKSTLFNALTKA 251
Query: 300 DSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADI 359
+ + ++ LFATLD T LP+ ++ DT+GFIS++PT+L+ F+ TLED + ADI
Sbjct: 252 E-VRAQDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTSLIAAFRATLEDVIEADI 310
Query: 360 IIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERV-------- 411
++HV DVS+ D Q + V+ L+ L +E E ++ V NK D + GER
Sbjct: 311 LLHVRDVSHGDTQAQAEDVEGVLRELGIEPDA-ERIIEVWNKADLLDDGERTRLLNLSAA 369
Query: 412 ---TEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVS 468
+L+SA G GL L E+++ + +A +T+ G + WL ++ V
Sbjct: 370 HRGAGPAPILVSALTGEGLPALAERIEGQVARARSTFAVTLPPEDGAA-LNWLYENAEVL 428
Query: 469 NIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSRKRG 505
+ R+ DT + L + + +F + F ++++ G
Sbjct: 429 D-RQSDTGGA-IALTIRIAPEKEPRFLNRFEAAQRIG 463
>gi|333919393|ref|YP_004492974.1| GTP-binding protein HflX [Amycolicicoccus subflavus DQS3-9A1]
gi|333481614|gb|AEF40174.1| GTP-binding protein HflX [Amycolicicoccus subflavus DQS3-9A1]
Length = 498
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 178/356 (50%), Gaps = 27/356 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+D I D ++ G G L+ V T + L Q
Sbjct: 102 AALAETAGSAVLDGVIQRRDKPDAATYLGSGKAAELREIVLSTGADT--VICDGELTPAQ 159
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA------ 229
L+ + +V V DR +++ IF HA +RE + Q+ +A++ Y+ R R +A
Sbjct: 160 LTALEKIVKVKVIDRTALILDIFAQHATSREGKAQVTLAQMEYMLPRLRGWGEALSRQAG 219
Query: 230 --TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
N G +++ R + ER KLK+ + +K R+ R ++QR + P+VA
Sbjct: 220 GRAGSNGGVGLRGPGETKIETDRRRIRERMAKLKREIRAMKSARDTKRARRQRNQVPSVA 279
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+VGYTN GK++L+ ALT LV +N LFATLD TT L + + DT+GF+ ++P
Sbjct: 280 IVGYTNAGKSSLLNALTGAGVLV-QNALFATLDPTTRRASLDDGREYVLTDTVGFVRHLP 338
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV-LVVG 399
T L+E F+ TLE+ AD+++HVVD S+ L Q + V E + + E+ L+V
Sbjct: 339 TQLVEAFRSTLEEVTDADVLVHVVDGSDEFPLGQIKAVREVINEVVEEQGTTPPPELLVI 398
Query: 400 NKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
NK DA P R + +SA G GL L+E++ D + GRK++ + V
Sbjct: 399 NKTDAADPMALAQLRRALPGAVFVSAHSGAGLTALREQLADRL----GRKDVEVLV 450
>gi|210623584|ref|ZP_03293910.1| hypothetical protein CLOHIR_01860 [Clostridium hiranonis DSM 13275]
gi|210153454|gb|EEA84460.1| hypothetical protein CLOHIR_01860 [Clostridium hiranonis DSM 13275]
Length = 436
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 179/336 (53%), Gaps = 21/336 (6%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G +V S I + + D + GKG +E +K G +F D L Q + ++DL
Sbjct: 51 GAEIVGSVIQNRPAVDAAYYIGKGKVEEIKGYCEGLDATLIIFN--DELSGAQTRNIEDL 108
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA---TNMNI-TKGF 238
+ DR +++ IF AK++E +LQ+ +A+L Y R + A T I T+G
Sbjct: 109 TGIKTIDRTTLILDIFAQRAKSKEGKLQVELAQLKYRLPRLYGMGGAMSRTGAGIGTRGP 168
Query: 239 LDSKRMV----LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ K + ++ R ++ L +K RE RN++++ P VA+VGYTN GK+TL+
Sbjct: 169 GEQKLEIDKRHILNRAADIRAELKLVKKNRETQRNQRKKSNIPIVALVGYTNAGKSTLLN 228
Query: 295 ALT-------DDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
L + + ++ LFATLDVT + +LPN+ L VDT+GF+S +P L++ F
Sbjct: 229 ELIKTHKEYESEKEVFVKDMLFATLDVTLRKAVLPNKRDFLVVDTVGFVSKLPHDLVDAF 288
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP 407
K TLE+ AD+I+HV+D +N Y QK+ ++ L+ L ++K ++V NKVD +
Sbjct: 289 KSTLEEVNYADLILHVIDATNDSYEIQKKTTEKVLKELGADDK---KTILVYNKVDKLEL 345
Query: 408 GERVTEEYDLL-ISATRGTGLAQLKEKVQDMILKAT 442
+ D++ ISA +G + +L ++ +++ T
Sbjct: 346 DIYPKNQDDVVYISAKQGINMDKLLNMIEKAVMENT 381
>gi|227549102|ref|ZP_03979151.1| HflX family GTP-binding protein [Corynebacterium lipophiloflavum
DSM 44291]
gi|227078831|gb|EEI16794.1| HflX family GTP-binding protein [Corynebacterium lipophiloflavum
DSM 44291]
Length = 496
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 233/483 (48%), Gaps = 66/483 (13%)
Query: 63 DLEESDEFKTI------RDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTR-DFMLAESK 115
DLEE + F+ + R E Q +++ ++ I G ++ T + + E
Sbjct: 36 DLEERNAFRRVTVETELRSEDQAEGFEVEYRKLRLEQVILVGAWIEGTTAEMEANMLELA 95
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
AL + G VV+ D ++ G G ++ L+ V T VF L Q
Sbjct: 96 ALAET-AGADVVELLYQKRDKPDPGTYIGSGKVKELRDIVVSTGADTVVFDGE--LSPGQ 152
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNIT 235
L++ ++ V DR M+++ IF HAK++E + Q+++A++ YL+TR R N++
Sbjct: 153 MVALEEALKIKVIDRTMLILDIFAQHAKSKEGKAQVSLAQMEYLYTRTRGW--GGNLSRQ 210
Query: 236 KGF-----------------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
G +++ R L KL+ L +K RE+ R ++QR P
Sbjct: 211 AGGRAGSNGGVGLRGPGETRIEADRRRLRTDMAKLRHELRGMKTAREVKRARRQRSTIPK 270
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
+A+ GYTN GK++LI A+T+ LV + LFATLD +T + L + ++ DT+GF+ +
Sbjct: 271 IAIAGYTNAGKSSLINAMTNAGVLV-EDALFATLDPSTRKAQLADGRNVVLTDTVGFVRH 329
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELE--EKILEHVL 396
+PT L+E FK TLE+ AD+++HVVD S+ L+Q + V++ L + E E I ++
Sbjct: 330 LPTQLVEAFKSTLEEVTGADLMLHVVDGSDAFPLKQIEAVNKVLSDVTRESGESIPPEIV 389
Query: 397 VVGNKVDAVPPG--ERVTEEYD------LLISATRGTGLAQLKEKVQ----------DMI 438
VV NK+D P + +D + +SA G G+A+L+ K++ M+
Sbjct: 390 VV-NKIDQADPVVLAELRHTFDNTGHDVVFVSAHTGEGIAELEGKIEMHLNSVEAHVQML 448
Query: 439 LKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
+ T R ++ RV G+ +R + + L+DV + VI ++ EF
Sbjct: 449 VPFT-RGDVVSRVHEQGT-------------VRSESYEEDGTLIDVRLPHVIAEQYS-EF 493
Query: 499 ISS 501
+ S
Sbjct: 494 VVS 496
>gi|261406202|ref|YP_003242443.1| GTP-binding proten HflX [Paenibacillus sp. Y412MC10]
gi|261282665|gb|ACX64636.1| GTP-binding proten HflX [Paenibacillus sp. Y412MC10]
Length = 430
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 173/327 (52%), Gaps = 25/327 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F GKG +E L+ + G TA+F L Q + L++ V + DR +++ I
Sbjct: 63 DSKWFIGKGKVEELRMAIDGLGATTAIFDQE--LSGAQVRNLEESLDVKIIDRTQLILDI 120
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN------ITKGFLDSK----RMVLM 247
F AKTRE +Q+ +A+L YL R N++ T+G +SK R +
Sbjct: 121 FAQRAKTREGIIQVELAQLTYLLPRLSG--HGKNLSRLGAGIGTRGPGESKLETDRRHIR 178
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
+R LK+ L+++ R + R ++++ VA+VGYTN GK+TL+ LT D + NQ
Sbjct: 179 DRISDLKRQLDEVTRHRTLHRERRKKSGAVQVALVGYTNAGKSTLLNRLTAADVYI-ENQ 237
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T+ LP+ ++ DT+GFI N+P L+ F+ TLE+A AD+I+HVVD S
Sbjct: 238 LFATLDPTSRVLELPSGKEVVLTDTVGFIQNLPHDLVAAFRATLEEANEADLILHVVDAS 297
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE---RVTEEYDLLISATRG 424
+P +Q V LQ L +K +V+ NK DA PG+ T E L ISA
Sbjct: 298 SPMRDEQMAVVQSILQDLGASDK---PQIVLFNKKDACEPGQLEMLPTGEGQLKISAYVD 354
Query: 425 TGLAQLKEKVQDMILKATGRKNITMRV 451
L ++E +QD + N+T R+
Sbjct: 355 QDLESVREAIQDRLSGG----NVTFRI 377
>gi|407769132|ref|ZP_11116509.1| GTPase [Thalassospira xiamenensis M-5 = DSM 17429]
gi|407288052|gb|EKF13531.1| GTPase [Thalassospira xiamenensis M-5 = DSM 17429]
Length = 459
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 201/389 (51%), Gaps = 26/389 (6%)
Query: 71 KTIRDEAQT-GALGTDH--QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVV 127
K I DE+ T GA G D +V V P +K + L E+ +L ++ + VV
Sbjct: 10 KKIADESLTAGANGDDDSPRVLVFHPELKRADQAGSWRDASSRLEEAVSLTGALD-FEVV 68
Query: 128 DSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPV 187
+ ++ + + FG G +E L Q++ A + + L QQ+ L+ ++ V
Sbjct: 69 GAEVVPIAKTRPATLFGTGVVERLGNQIK--AEEADIVMINGQLSPIQQRNLEREWKCKV 126
Query: 188 FDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY-RTIEDATNMNITKGFLDSK---- 242
DR ++++IF A+TRE RLQ+ +A L Y +R RT +GFL
Sbjct: 127 IDRTGLILEIFADRARTREGRLQVQLALLSYQKSRLVRTWTHLERQRGGRGFLAGPGERQ 186
Query: 243 ----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTD 298
R ++ ++ KL++ L ++K RE+ R ++R +P VA+VGYTN GK+TL LT
Sbjct: 187 IEIDRRLIGDKLAKLRRELEEVKRTRELHREARRRVPYPIVALVGYTNAGKSTLFNQLTV 246
Query: 299 DDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLAD 358
D + + LFATLD T LP+ +++ DT+GF+S++P L+ F+ TLE+ + AD
Sbjct: 247 SD-VFAEDMLFATLDPTMRGLELPSGRKVILSDTVGFVSDLPHDLVAAFRATLEEVLEAD 305
Query: 359 IIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG-NKVDAVPPGERVT--EEY 415
+I+HV D S+ + QK V E L+ L L++ I LV NK D + GE +T +EY
Sbjct: 306 LIVHVRDASSHEAEAQKLDVLEVLKALGLQKAIDGEELVEALNKCDQL-EGEDLTAVQEY 364
Query: 416 D------LLISATRGTGLAQLKEKVQDMI 438
+ ISA +GT L ++D +
Sbjct: 365 SARNANTIAISAIKGTNCDALLALIEDRL 393
>gi|332558240|ref|ZP_08412562.1| small GTP-binding protein [Rhodobacter sphaeroides WS8N]
gi|332275952|gb|EGJ21267.1| small GTP-binding protein [Rhodobacter sphaeroides WS8N]
Length = 447
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 206/411 (50%), Gaps = 31/411 (7%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ FV+ P I+ + + D LAE+ +L +++ +V ++ L FG G
Sbjct: 33 RAFVLHPDIRTERSRR---LPDLRLAEAVSLAAALPDMEIVGQEVVRLPRAQPGLLFGTG 89
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
+E LK + G V V V V + QQ+ L+ + V + DR ++++IF A+TRE
Sbjct: 90 KVEELKARFNG-LDVGLVLVDGPVSPV-QQRNLEKEWGVKLLDRTGLILEIFADRARTRE 147
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKK 255
LQ+ +A L Y R R + T++ +G +++ R + E+ ++++
Sbjct: 148 GVLQVELAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDEQVIRIRR 205
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L+K+ RE+ R +++ FP VA+VGYTN GK+TL +T D L ++ LFATLD T
Sbjct: 206 QLDKVVKTRELHRASRRKVPFPIVALVGYTNAGKSTLFNRMTGADVLA-KDMLFATLDPT 264
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
LP+ +++ DT+GFIS++PT L+ F+ TLE+ + AD+I+HV D+++P+ +Q
Sbjct: 265 MRGVTLPSGRKVILSDTVGFISDLPTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQA 324
Query: 376 QHVDETLQHLELEEKILEHVLVVGNKVDAVPP-------GERVTEEYDLLISATRGTGLA 428
V E LQ L ++ + + V NK+D V + E +SA G GL
Sbjct: 325 ADVAEILQSLGVKGATPQ--VEVWNKLDLVEGAAHEQLLAQAAKSETIFALSALTGEGLP 382
Query: 429 QLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEH 479
L E V + + +++ + G WL V+ E +T H
Sbjct: 383 DLLEAVSAAFDEEKTERQLSLGF-ADGRRRAWLHAEGVVTG--EAETEEGH 430
>gi|357151816|ref|XP_003575913.1| PREDICTED: GTPase HflX-like [Brachypodium distachyon]
Length = 535
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 182/354 (51%), Gaps = 22/354 (6%)
Query: 98 GKKMKRNTTRDFMLAES-KAL--VSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQ 154
G + KR DF + ES K L ++ G VV ST L + + +++ G G + ++
Sbjct: 147 GVECKRAGGYDFSIEESLKELEQLADTAGLMVVGSTYQKLSNPNPRTYIGSGKVGEIRTA 206
Query: 155 VRGDARVTAVFVSVDVLKLHQQKMLQDLF--QVPVFDRYMIVIQIFKAHAKTREARLQIA 212
++ T +F D L Q + L+ F V V DR +++ IF A T EA LQ+
Sbjct: 207 IQALDVETVIFD--DELSAGQLRNLEKSFGGSVRVCDRTALILDIFNQRAATHEADLQVT 264
Query: 213 IAELPY-------LWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQRE 265
+A++ Y +WT + + ++ + +L + L+K L ++ R+
Sbjct: 265 LAQMEYQLPRLTKMWTHLERQSGGQVKGMGEKQIEVDKRILRTQISTLRKELESVRKHRK 324
Query: 266 MMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL 325
+ RN++Q P V++VGYTN GK+TL+ LT D L ++LFATLD TT ++ +
Sbjct: 325 LYRNRRQSVPIPVVSLVGYTNAGKSTLLNRLTGADVLA-EDKLFATLDPTTRRVLMKSGT 383
Query: 326 RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL 385
L DT+GFI +PT L+ F+ TLE+ + II+H+VD+S+P QQ VD+ L+ L
Sbjct: 384 EFLLTDTVGFIQKLPTMLVAAFRATLEEISESSIIVHLVDISHPLAQQQIDAVDKVLKEL 443
Query: 386 ELEEKILEHVLVVGNKVDAVPPGERVTEEYD----LLISATRGTGLAQLKEKVQ 435
++E LVV NK+D RV EE + + ISA G GL + +Q
Sbjct: 444 DIESI---PKLVVWNKIDNTDDPLRVKEEAEKQGTICISAMNGDGLEEFCYAIQ 494
>gi|298249597|ref|ZP_06973401.1| GTP-binding proten HflX [Ktedonobacter racemifer DSM 44963]
gi|297547601|gb|EFH81468.1| GTP-binding proten HflX [Ktedonobacter racemifer DSM 44963]
Length = 438
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 170/319 (53%), Gaps = 26/319 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ GKG LE LK + G V V D L+ QQ L+D V DR +++ I
Sbjct: 63 DSATYIGKGKLEELK-ALEGQLAFDVVVVD-DELRPAQQHNLEDQLHARVIDRTELILDI 120
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN-----------ITKGFLDSKRMV- 245
F HA+TRE LQ+ +A+L Y R E A N + +G ++K +
Sbjct: 121 FAQHARTREGLLQVELAQLAYRLPRLS--EHAINFSRVGGGTLGGAIGVRGPGETKLEID 178
Query: 246 ---LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
+ R ++K+ L ++ R++ R ++ P VAV+GYTN GK+TL ALTD ++L
Sbjct: 179 RRRIRRRMSEIKRELEAVRQHRQVSRQQRASHALPVVAVIGYTNAGKSTLFNALTDANAL 238
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V N+LFATLD TT + LPN L DT+GFI +PT L+ F+ TLE+ ADI++
Sbjct: 239 V-ENKLFATLDPTTRQLTLPNNQEALLTDTVGFIQKLPTDLVAAFRATLEEVTDADILLE 297
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEY---DLLI 419
VVD+S+P+ +Q + V TL+ L E L + + NK+D + +V + + I
Sbjct: 298 VVDISHPNMHEQHEEVLRTLKDLHAEH--LPRITAL-NKIDLLGKTPQVDTSFFPDAVAI 354
Query: 420 SATRGTGLAQLKEKVQDMI 438
SA + GL L EK+ ++
Sbjct: 355 SALQRQGLDTLCEKMSQVL 373
>gi|408500759|ref|YP_006864678.1| GTP-binding protein [Bifidobacterium asteroides PRL2011]
gi|408465583|gb|AFU71112.1| GTP-binding protein [Bifidobacterium asteroides PRL2011]
Length = 507
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 179/344 (52%), Gaps = 27/344 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTA-VFVSVDVLKLH 174
A ++ G V+D + + D ++ G G L V AR+ A ++ D L
Sbjct: 100 AALARTAGAEVLDGLLQQRVKPDPATYLGSGKARELADIV---ARLGADTIITDDDLHPS 156
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R + +
Sbjct: 157 QRRALEDVTKVKVVDRTALILDIFAQHATSREGKAQVELAQLEYMLPRLRGWGGSLSRQA 216
Query: 235 ------------TKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
++G ++K R V+ R +LK+ + ++ R++ R ++R + P
Sbjct: 217 GGQAAGQAGGIGSRGPGETKIETDRRVIRRRISRLKRQIAQMAPSRQVKRGSRRRYQLPA 276
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VAVVGYTN GK++L LT + LV N LFATLD + +YVDT+GF+
Sbjct: 277 VAVVGYTNAGKSSLTNRLTGSEELV-ENALFATLDTAVRRTKAADGRLYVYVDTVGFVRR 335
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+PT L+E FK TLE+ +D+I+HVVD S+PD Q + VD L + E I L+V
Sbjct: 336 LPTQLVEAFKSTLEEVGQSDLILHVVDGSHPDPFGQIRAVDAVLADIPGAESIPR--LLV 393
Query: 399 GNKVDAVPPGERVT----EEYDLLISATRGTGLAQLKEKVQDMI 438
NKVD + R E L+SA G GL L+++V++++
Sbjct: 394 FNKVDLIDKDARQRLANLEPEAFLVSAKEGQGLESLRKRVEELL 437
>gi|114762884|ref|ZP_01442316.1| GTP-binding protein HflX [Pelagibaca bermudensis HTCC2601]
gi|114544494|gb|EAU47501.1| GTP-binding protein HflX [Roseovarius sp. HTCC2601]
Length = 417
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 191/367 (52%), Gaps = 26/367 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
+V S ++ L FG G +E L+ Q+ DA V V V V + QQ+ L+ ++V
Sbjct: 39 IVGSAVVPLRDPHPGHLFGTGKIEELREQIH-DAEVELVLVDGPVSPV-QQRNLEKEWKV 96
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
+ DR ++++IF A TRE LQ+ +A L Y R R + T++ +G
Sbjct: 97 KLLDRTGLILEIFSDRAATREGVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGP 154
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+++ R + E+ +L++ L ++ R++ R + + FP VA+VGYTN GK+TL
Sbjct: 155 GETQIEADRRAIDEQLVRLRRQLERVVKTRDLHRKARAKVPFPIVALVGYTNAGKSTLFN 214
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT + ++ ++ LFATLD T LP + ++ DT+GFIS++PT L+ F+ TLE+
Sbjct: 215 RLTGAE-VMAKDMLFATLDPTMRAVKLPTGIDVILSDTVGFISDLPTELVAAFRATLEEV 273
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG------ 408
+ ADII+HV D+S+P+ +Q V L L ++E++ ++ + NK D + P
Sbjct: 274 LAADIIVHVRDISHPNTEEQAADVAAILDSLGVDEEV--PLVELWNKTDRLAPDVHEGVL 331
Query: 409 ERVTEEYDLL-ISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
+R E ++ +SA G GL + E + + + T + + + G WL K V
Sbjct: 332 QRAAREENIFAVSALTGEGLDTMLEAITERLQGETLEEELRLAF-DDGKRRSWLFKKGLV 390
Query: 468 SNIREDD 474
+D+
Sbjct: 391 QGEAQDE 397
>gi|374575494|ref|ZP_09648590.1| GTP-binding protein HflX [Bradyrhizobium sp. WSM471]
gi|374423815|gb|EHR03348.1| GTP-binding protein HflX [Bradyrhizobium sp. WSM471]
Length = 460
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 212/440 (48%), Gaps = 42/440 (9%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWR------VVDSTIISLLSFDKK 140
+V V+ P+++ + +L +++A + G V D+ I +
Sbjct: 23 RVLVIGPYLRVRAGSADAQSEAHVLRDAEARLDEAAGLARAIDLVVADAIIAPINQIRPA 82
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
++ GKG +E + + + V +D L QQ+ L+ Q V DR ++++IF
Sbjct: 83 TYIGKGKVEEIAALAKS---LEVELVVMDCALAPIQQRNLEKELQAKVLDRTGLILEIFG 139
Query: 200 AHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLME 248
AKT+E LQ+ +A L Y R R + T++ +G +++ R ++ E
Sbjct: 140 RRAKTKEGSLQVELAHLNY--QRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLIQE 197
Query: 249 REQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQL 308
R KL+ L K++ R + R +QR + VA+VGYTN GK+TL LT D + + L
Sbjct: 198 RISKLEGELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRAD-VQAADML 256
Query: 309 FATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSN 368
FATLD T LP+ + + DT+GFISN+PT L+ F+ TLE+ + AD+I+HV D+S+
Sbjct: 257 FATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEADVILHVRDISH 316
Query: 369 PDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP----------GERVTEEYDLL 418
D Q+ VD L+ L + ++ V NK+D P R + +L
Sbjct: 317 DDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKIDRYGPEQREELLNIAARRPEDHPAML 376
Query: 419 ISATRGTGLAQLKEKVQDMILKATGRKNITMRVR---SGGSEYQWLMKHTAVSNIREDDT 475
+SA G G+ L +++ + K IT+ + S G+ WL +++ V D
Sbjct: 377 VSAVSGEGVDALLAAIEERL----AAKRITLDLSIDASDGAGISWLHRNSEVLAKELHDG 432
Query: 476 SAEHLL-LDVVMTDVIMNKF 494
+ + +D D+++N+F
Sbjct: 433 RFDMTVRVDETKRDIVVNRF 452
>gi|197105188|ref|YP_002130565.1| GTP-binding protein HflX [Phenylobacterium zucineum HLK1]
gi|196478608|gb|ACG78136.1| GTP-binding protein HflX [Phenylobacterium zucineum HLK1]
Length = 424
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 204/404 (50%), Gaps = 39/404 (9%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
V ++ + L + FGKG +E + D+ V V D L QQ+ L+ ++
Sbjct: 34 VRETLVAPLRRLTPATLFGKGKVEEVA--AVVDSVEADVVVVDDALTPVQQRNLEKAWKA 91
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
V DR ++++IF A+TRE RLQ+ +A L Y R R + T++ +G
Sbjct: 92 KVIDRTGLILEIFARRARTREGRLQVELARLTY--ERSRLVRTWTHLERQRGGFGVMGGP 149
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+++ R +L E+ KLK+ L +++ R + R+ ++R +PTVA+VGYTN GK+TL
Sbjct: 150 GETQIETDRRLLAEKIGKLKRELVEVRRTRTLQRSARRRVPYPTVALVGYTNAGKSTLFN 209
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT + L ++ LFATLD T LP+ + DT+GFIS++P L+E F+ TLE+
Sbjct: 210 RLTQAEVLA-QDMLFATLDPTLRMLKLPDGRPAILSDTVGFISDLPHELVEAFRATLEEV 268
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLEL---EEKILEHVLVVGNKVDAVPPGERV 411
AD+++HV D+++ + Q Q V LQ L + E +ILE V NKVD +P ER
Sbjct: 269 READVVLHVRDIASEETEAQAQDVRTVLQRLGVDMDERRILE----VWNKVDLLPADERQ 324
Query: 412 TEEYD--------LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG-GSEYQWLM 462
D +L+SA G G L V ++ +A + + +G G+ WL
Sbjct: 325 DAAGDARRAHPPAILVSAVTGEGCDDLLRAVGALVDEA---PPVDVYAPAGEGAAIAWLY 381
Query: 463 KHT-AVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSRKRG 505
+H V + D S L V ++ + +F+ F + RG
Sbjct: 382 RHGRVVERVEGKDGSVR---LAVSLSPQALGQFEQLFPHAEVRG 422
>gi|338175488|ref|YP_004652298.1| GTP-binding protein HflX [Parachlamydia acanthamoebae UV-7]
gi|336479846|emb|CCB86444.1| GTP-binding protein hflX [Parachlamydia acanthamoebae UV-7]
Length = 436
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 202/400 (50%), Gaps = 35/400 (8%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLE---LLKRQVRGDARVTAVFVSVDVLKLHQQKML 179
G +V + D +F +G LE L ++ D + + D + QQ+ L
Sbjct: 50 GVEIVAKVPCLIRKVDAATFVTQGKLEELITLSKECAAD-----LIIFDDEISPSQQRNL 104
Query: 180 QDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT---RYRTIEDA 229
+ FQ+ V DR +++++F AKT+EARLQI A + Y LW+ R A
Sbjct: 105 EKAFQLTVMDRTEVILEVFAQRAKTKEARLQIEYARVKYQAPRLKRLWSHLSRQHGSGGA 164
Query: 230 TNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYT 285
KG ++ R ++ +R ++L+ + ++K RE+ R + R P A+VGYT
Sbjct: 165 GGGAYLKGEGEKQIEIDRRLIKKRLEQLQSEIQEVKEHREIQRVARTRSAIPVFALVGYT 224
Query: 286 NCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLE 345
N GK+TL+ ALTD D V ++LFATLD TT + L +L DT+GFI +P L+
Sbjct: 225 NAGKSTLLNALTDADVFV-EDKLFATLDTTTRKFPLSTGQEVLVTDTVGFIRKLPHLLVA 283
Query: 346 PFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV 405
FK TLE+A+ ADI++HV+D ++P L+Q + + L+ L + +K ++ V NK+D
Sbjct: 284 AFKSTLEEAIQADILLHVIDATHPMALEQARTTIQVLKELGVGDK---PIITVLNKIDQA 340
Query: 406 PPGE---RVTEEYD--LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQW 460
E R+ EY + ISA G +L+E + + RK + +R+ SEY
Sbjct: 341 EQNELTTRLRLEYPRTVPISALHRRGFEELEEMMLRE--LSQQRKTLNLRI--PQSEYAL 396
Query: 461 LMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFIS 500
+ + N+ D +L++V + + NK K+ IS
Sbjct: 397 VSEIRRSGNVISQDYEENDVLIEVDLPVALANKLKNYVIS 436
>gi|282889986|ref|ZP_06298521.1| hypothetical protein pah_c008o089 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500179|gb|EFB42463.1| hypothetical protein pah_c008o089 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 451
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 202/400 (50%), Gaps = 35/400 (8%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLE---LLKRQVRGDARVTAVFVSVDVLKLHQQKML 179
G +V + D +F +G LE L ++ D + + D + QQ+ L
Sbjct: 65 GVEIVAKVPCLIRKVDAATFVTQGKLEELITLSKECAAD-----LIIFDDEISPSQQRNL 119
Query: 180 QDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT---RYRTIEDA 229
+ FQ+ V DR +++++F AKT+EARLQI A + Y LW+ R A
Sbjct: 120 EKAFQLTVMDRTEVILEVFAQRAKTKEARLQIEYARVKYQAPRLKRLWSHLSRQHGSGGA 179
Query: 230 TNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYT 285
KG ++ R ++ +R ++L+ + ++K RE+ R + R P A+VGYT
Sbjct: 180 GGGAYLKGEGEKQIEIDRRLIKKRLEQLQSEIQEVKEHREIQRVARTRSAIPVFALVGYT 239
Query: 286 NCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLE 345
N GK+TL+ ALTD D V ++LFATLD TT + L +L DT+GFI +P L+
Sbjct: 240 NAGKSTLLNALTDADVFV-EDKLFATLDTTTRKFPLSTGQEVLVTDTVGFIRKLPHLLVA 298
Query: 346 PFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV 405
FK TLE+A+ ADI++HV+D ++P L+Q + + L+ L + +K ++ V NK+D
Sbjct: 299 AFKSTLEEAIQADILLHVIDATHPMALEQARTTIQVLKELGVGDK---PIITVLNKIDQA 355
Query: 406 PPGE---RVTEEYD--LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQW 460
E R+ EY + ISA G +L+E + + RK + +R+ SEY
Sbjct: 356 EQNELTTRLRLEYPRTVPISALHRRGFEELEEMMLRE--LSQQRKTLNLRI--PQSEYAL 411
Query: 461 LMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFIS 500
+ + N+ D +L++V + + NK K+ IS
Sbjct: 412 VSEIRRSGNVISQDYEENDVLIEVDLPVALANKLKNYVIS 451
>gi|154488911|ref|ZP_02029760.1| hypothetical protein BIFADO_02220 [Bifidobacterium adolescentis
L2-32]
gi|154083048|gb|EDN82093.1| GTP-binding protein HflX [Bifidobacterium adolescentis L2-32]
Length = 496
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 173/361 (47%), Gaps = 25/361 (6%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR 156
W + + L E AL + G V D + + D ++ G G L V
Sbjct: 84 WSSRETTQAAAEESLRELAALAET-AGAVVCDGLLQHRIKPDAATYVGSGKARELAGIVA 142
Query: 157 GDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAEL 216
D T V D L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L
Sbjct: 143 QDEADT--IVVDDDLPPSQRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQL 200
Query: 217 PYLWTRYR-----------TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNKLK 261
Y+ R R ++G ++K R V+ R KL++ + ++
Sbjct: 201 EYMLPRLRGWGGSLSRQAGGRAAGDAGIGSRGPGETKIEMDRRVIRSRIAKLRRQIAQMA 260
Query: 262 GQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGML 321
R++ R ++R PTVAVVGYTN GK++L LT LV N LFATLD
Sbjct: 261 PARDVKRGARRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRAKA 319
Query: 322 PNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDET 381
+ YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q V++
Sbjct: 320 KDGRLYAYVDTVGFVRRLPTQLIEAFKSTLEEVADADLIVHVVDGSHPDPFSQIDAVNDV 379
Query: 382 LQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDL----LISATRGTGLAQLKEKVQDM 437
L ++ E I +V NK D + R E + ++SA G G+ L+E V+ M
Sbjct: 380 LSDIDGVETI--PTIVAFNKADRMDEAARERIEALMPEAHIVSAFSGEGVDALREHVESM 437
Query: 438 I 438
+
Sbjct: 438 L 438
>gi|429730696|ref|ZP_19265342.1| GTP-binding protein HflX [Corynebacterium durum F0235]
gi|429147134|gb|EKX90164.1| GTP-binding protein HflX [Corynebacterium durum F0235]
Length = 505
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 194/382 (50%), Gaps = 28/382 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G ++ LK V T + L Q L+ V V DR M+++ I
Sbjct: 128 DPGTYIGSGKVQELKDIVAATGSDTVICDGE--LSPGQMIALEKALDVKVIDRTMLILDI 185
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HAK++E + Q+++A++ YL TR R A N G +++
Sbjct: 186 FAQHAKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAGGRAGSNGGVGLRGPGETKIEAD 245
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R L KL+K L +K RE+ R++++ P +A+ GYTN GK++LI A+T L
Sbjct: 246 RRRLRSEMAKLRKELTGMKTAREVKRSQRRASTIPQIAIAGYTNAGKSSLINAMTGAGVL 305
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V + LFATLD TT L + +++ DT+GF+ ++PT L+E F+ TLE+ + AD+++H
Sbjct: 306 V-EDALFATLDPTTRRAELADGRAVVFTDTVGFVRHLPTQLVESFRSTLEEVVEADLVLH 364
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELEEKI-LEHVLVVGNKVDAVPPGERVTEEYDL---- 417
VVD S+P L+Q + V+ + + E+K+ ++V NK+D P + L
Sbjct: 365 VVDGSDPFPLKQIEAVNSVITEIVQEQKVQAPPEIIVVNKIDQADPLTLAELRHVLDDVV 424
Query: 418 LISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSA 477
+SA G G+A+L+ +V+ + + + GG + + + + ++D +A
Sbjct: 425 FVSARTGDGIAELEARVELFLNSLDDHVTVLIPFTHGG----VVARIHELGTVLKEDYTA 480
Query: 478 EHLLLDVVMTDVIMNKFKHEFI 499
E L+DV + + + + +FI
Sbjct: 481 EGTLIDVRLPHSVATELQ-DFI 501
>gi|395781606|ref|ZP_10462024.1| GTP-binding protein HflX [Bartonella rattimassiliensis 15908]
gi|395421039|gb|EJF87297.1| GTP-binding protein HflX [Bartonella rattimassiliensis 15908]
Length = 445
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 187/348 (53%), Gaps = 29/348 (8%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
ES L +I+ VV I+++ + FGKG ++ L + D + + +L
Sbjct: 48 ESLGLARAIR-LEVVSYETINIVKLRSATLFGKGRVDALAHYI--DEYSIELVIVDHLLT 104
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
QQ+ L+ L+ V DR ++++IF A+T+E LQ+ +A L Y + R + T++
Sbjct: 105 PIQQRNLEKLWNCKVIDRTALILEIFGDRARTKEGVLQVQLAHLSY--QKGRLVRSWTHL 162
Query: 233 NITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
+G +++ R +L E+ ++++ L + R + R K+++ +P VA+
Sbjct: 163 ERQRGGRGFLGGPGETQIEADRRLLQEKIVRIRRELETVIKTRALHRAKRKKTSYPVVAL 222
Query: 282 VGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPT 341
VGYTN GK+TL L+ D ++ +N LFATLD + +LP+ +L DT+GFISN+PT
Sbjct: 223 VGYTNTGKSTLFNRLSGAD-ILAKNMLFATLDPILRKVVLPHGKTVLLSDTVGFISNLPT 281
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
L+ F+ TLE+ + AD+I+HV D+S+ D+ Q V E L L+++ EH++ V NK
Sbjct: 282 NLIAAFRATLEEVVEADLILHVRDMSDLDHRAHAQDVLEVLSSLDIDVDDTEHIIEVWNK 341
Query: 402 VDAV----------PPGERVTEEYDLLISATRGTGLAQLKEKVQDMIL 439
+D V R+ + ++SA +G GL +L + +++ I
Sbjct: 342 IDTVDEQALNVLQTSAKTRLNPAF--MVSALKGDGLDKLLKVIEEKIF 387
>gi|325106895|ref|YP_004267963.1| GTP-binding protein HflX [Planctomyces brasiliensis DSM 5305]
gi|324967163|gb|ADY57941.1| GTP-binding protein HflX [Planctomyces brasiliensis DSM 5305]
Length = 462
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 123/360 (34%), Positives = 191/360 (53%), Gaps = 30/360 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ GKG +E L + ++ AVF + L Q K ++ + V DR +++ I
Sbjct: 60 DPATYLGKGKIEELHQLMQSTGAELAVFD--NNLSPSQGKNIEAAIKTIVVDRSEVILDI 117
Query: 198 FKAHAKTREARLQIAIAELPYL-------WTRYRTIEDATNMNIT--KGFLDSKRMVLME 248
F +HAKT EARLQ+ +A+L Y+ WT IE + L+ R +L +
Sbjct: 118 FASHAKTYEARLQVELAQLLYMRPRLKRMWTHLERIEGGIGSGRGPGEKQLELDRRMLDK 177
Query: 249 REQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQL 308
R +L+K L ++ +RE R R + TV++VGYTN GK+TL++ALT ++ + NQL
Sbjct: 178 RVSELRKKLETVEKRRE--RLVASRNESFTVSLVGYTNAGKSTLMRALTGEEVYIA-NQL 234
Query: 309 FATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSN 368
FATLD T + +PN +L DT+GF+ ++P L+ FK TLE+A+ AD+++HVVD SN
Sbjct: 235 FATLDTKTRKWSIPNWGEVLLSDTVGFVRDLPHHLVASFKSTLEEALQADLLLHVVDASN 294
Query: 369 PDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP---PGERVTEEYDLLISATRGT 425
P+ Q V+ L+ + +K L+V NKVD +P P E+ TE + I G
Sbjct: 295 PEAQLQIDTVEHVLEEIGASDK---ETLLVFNKVDRLPGHTPAEQ-TETSEDDIPEPEGD 350
Query: 426 GLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVV 485
G L D I++ R I++ SG E L++ + + S H L+D+V
Sbjct: 351 G-EPLDRSWYD-IMRNKYRSAISVSAASG--EGLELLRAAVIERL-----SRSHQLVDIV 401
>gi|254294018|ref|YP_003060041.1| GTP-binding proten HflX [Hirschia baltica ATCC 49814]
gi|254042549|gb|ACT59344.1| GTP-binding proten HflX [Hirschia baltica ATCC 49814]
Length = 445
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 198/375 (52%), Gaps = 27/375 (7%)
Query: 142 FFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAH 201
FG G L+L+ ++ D + V + + QQ+ L++ V V DR ++++IF
Sbjct: 64 LFGAGQLDLISERL-DDCEGNLLVVDCSLSPI-QQRNLENTLNVKVMDRTGLILEIFGVR 121
Query: 202 AKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMERE 250
A++ E RLQ+ +A L+ R R + T++ +G L++ R +L R
Sbjct: 122 ARSAEGRLQVEMAR--QLYERSRLVRTWTHLERQRGGTGFLAGPGESQLEADRRMLDGRI 179
Query: 251 QKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFA 310
KLK L ++ R + R ++R+ P VA+ GYTN GK+TL +LT S+ + FA
Sbjct: 180 AKLKSDLEAVRRTRRLQRAGRKRRGAPIVALAGYTNAGKSTLFNSLTHS-SVFAADMPFA 238
Query: 311 TLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPD 370
TLD T + L + +I +DT+GFI+++PT L+E F+ T+E+A+ AD+++HV D+S+P+
Sbjct: 239 TLDPTARDVELSSGKKISMIDTVGFITDLPTHLIESFRATIEEAIEADLLLHVRDISHPE 298
Query: 371 YLQQKQHVDETLQHLELE-EKILEHVLVVGNKVDAVPPG-----ERVTEEYD--LLISAT 422
+Q V++ L LE + V+ V NK DA+ + E D L SAT
Sbjct: 299 TDRQSSDVNDVLTKLEQDLNADRPPVIEVWNKSDALSDDVLTALKTTVENRDDIALTSAT 358
Query: 423 RGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLL 482
G GL L + VQD + +T + + + G + WL ++ +SN D+ ++++
Sbjct: 359 TGEGLDDLMQMVQDKLFASTREFELKIEPKYGRAR-SWLHQNCDISNETVDENG--NVII 415
Query: 483 DVVMTDVIMNKFKHE 497
V ++ +N+F HE
Sbjct: 416 RVQLSVRELNEFAHE 430
>gi|224368961|ref|YP_002603125.1| hypothetical protein HRM2_18590 [Desulfobacterium autotrophicum
HRM2]
gi|223691678|gb|ACN14961.1| hypothetical protein HRM2_18590 [Desulfobacterium autotrophicum
HRM2]
Length = 552
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 181/349 (51%), Gaps = 28/349 (8%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E K L S +V+D+ + D K G+G L L +R + + V
Sbjct: 216 LDELKELCRS-SNIKVLDTALQRRKKIDPKFVVGRGKLADL--VIRALQKHATMLVFDRE 272
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
L Q + + D ++ V DR +++ IF AK+RE +LQ+ +A++ YL R T A
Sbjct: 273 LNPSQIRSITDFVEMKVIDRTQLILDIFARRAKSREGKLQVELAQMKYLLPRLATKNTAM 332
Query: 231 N--------MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
+ + L+ R + +R +L K ++K++ QR R+++ R+ P +++V
Sbjct: 333 SRLTGGIGGRGPGETKLEINRRRVRDRITRLSKDISKIRKQRSQQRSQRNRRGIPVISIV 392
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ LT + ++ N+LFATLD ++ P L ++ DT+GFI ++P
Sbjct: 393 GYTNAGKSTLLNTLTKSE-IIAENRLFATLDPSSRRLRFPKDLEVIITDTVGFIQDLPEE 451
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+E F TLE+ ADI++HVVD+SNP Y QQ V+ L+ L LE+ VL V NK
Sbjct: 452 LMEAFHATLEELEDADILLHVVDISNPRYEQQMGSVERILKELGLEKT---PVLYVFNKQ 508
Query: 403 DAVPPGERVTEEYD--------LLISATRGTGLAQLKEKVQDMILKATG 443
D + ++D L+SATR L L +++ MI + TG
Sbjct: 509 DKI-----ALADFDNPWLLNQGSLVSATRPETLKPLVSRLESMIRQQTG 552
>gi|227542284|ref|ZP_03972333.1| HflX family GTP-binding protein [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227181945|gb|EEI62917.1| HflX family GTP-binding protein [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 505
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 177/348 (50%), Gaps = 24/348 (6%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D + E KAL + G VVD+ D ++ G+G + LK + +A V
Sbjct: 101 DAAMEELKALAET-AGSEVVDTLYQKRDKPDPGTYIGQGKVSELKVAI--NAHEADTVVC 157
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIE 227
L Q L+ V V DR M+++ IF HAK+RE + Q+A+A++ YL TR R
Sbjct: 158 DGELSPGQMIALEKALDVKVIDRTMLILDIFAQHAKSREGKTQVALAQMEYLITRVRGWG 217
Query: 228 DA--------TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQ 272
A N G +++ R L KL+K L +K R++ +++
Sbjct: 218 GALSRQAGGRAGSNGGVGLRGPGETKIEADRRRLRSEMAKLRKELASMKKARDVKAMRRR 277
Query: 273 RQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDT 332
P +A+ GYTN GK++LI ALT LV + LFATLD TT L + I++ DT
Sbjct: 278 GSTIPKIAIAGYTNSGKSSLINALTGAGVLV-EDALFATLDPTTRRAQLVDGRSIIFSDT 336
Query: 333 IGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKI- 391
+GF+ ++PT L+E F+ TLE+ + AD+I+HVVD S+P L+Q + V + + EE +
Sbjct: 337 VGFVRHLPTQLVEAFRSTLEEVLGADLILHVVDGSDPFPLKQIEAVRGVILDIVREEGVE 396
Query: 392 LEHVLVVGNKVDAVPPGERVTEEYDL----LISATRGTGLAQLKEKVQ 435
++V NK+D P + L +SA G G+A+L+ +++
Sbjct: 397 APPEIIVVNKIDQADPLVLAELRHALDDVAFVSARTGEGIAELESRIE 444
>gi|254469962|ref|ZP_05083367.1| GTP-binding proten HflX [Pseudovibrio sp. JE062]
gi|211961797|gb|EEA96992.1| GTP-binding proten HflX [Pseudovibrio sp. JE062]
Length = 491
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 212/409 (51%), Gaps = 34/409 (8%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAV-FVSVD 169
L E+ L ++I+ +V S+++ L + S FG G +E ++RG + + V VD
Sbjct: 66 LEEAVGLAAAIE-LEIVSSSLVRLANVKPGSLFGSGKVE----EIRGQIEIEEIELVVVD 120
Query: 170 -VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIED 228
L QQ+ L+ + V DR ++++IF A+T+E RLQ+ +A L W + R +
Sbjct: 121 HPLTPIQQRNLERDWNTKVIDRTGLILEIFGERAQTKEGRLQVELAHL--TWQKSRLVRS 178
Query: 229 ATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
T++ +G +++ R ++ +R LK L +++ R++ R ++++ P
Sbjct: 179 WTHLERQRGGLGFVGGPGETQIEADRRIIQDRITLLKGQLEQVQRTRKLHRKQRKKVPHP 238
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+A VGYTN GK+TL +T+ + + ++ LFATLD T LP+ ++ DT+GFIS
Sbjct: 239 VIAFVGYTNAGKSTLFNRMTNAE-VFAKDLLFATLDPTLRRLKLPHGREVILSDTVGFIS 297
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
+P L+ F+ TLE+ + ADI++HV D+++ D Q V+ETL+ L L+ + V+
Sbjct: 298 ELPHNLVAAFRATLEEVIQADIVLHVRDIAHEDTKAQSLDVNETLEMLGLKVSESDRVIE 357
Query: 398 VGNKVDAVPPGER-------VTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMR 450
V NK+D + R +E + +SA G G+ L +++ + A +TM
Sbjct: 358 VYNKIDKLDEAHREKLLESNSVDEGPISVSAISGDGIPDLLARIEARL--AEQLDTVTMV 415
Query: 451 V-RSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
+ S G + WL +H + + DD + + L V + D ++ + F
Sbjct: 416 LPHSDGQGHAWLYQHCEI--LSRDDVE-DGIRLAVRVPDAHRSRVRERF 461
>gi|227488719|ref|ZP_03919035.1| HflX family GTP-binding protein [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227091141|gb|EEI26453.1| HflX family GTP-binding protein [Corynebacterium glucuronolyticum
ATCC 51867]
Length = 505
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 177/348 (50%), Gaps = 24/348 (6%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D + E KAL + G VVD+ D ++ G+G + LK + +A V
Sbjct: 101 DAAMEELKALAET-AGSEVVDTLYQKRDKPDPGTYIGQGKVSELKVAI--NAHEADTVVC 157
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIE 227
L Q L+ V V DR M+++ IF HAK+RE + Q+A+A++ YL TR R
Sbjct: 158 DGELSPGQMIALEKALDVKVIDRTMLILDIFAQHAKSREGKTQVALAQMEYLITRVRGWG 217
Query: 228 DA--------TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQ 272
A N G +++ R L KL+K L +K R++ +++
Sbjct: 218 GALSRQAGGRAGSNGGVGLRGPGETKIEADRRRLRSEMAKLRKELASMKKARDVKAMRRR 277
Query: 273 RQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDT 332
P +A+ GYTN GK++LI ALT LV + LFATLD TT L + I++ DT
Sbjct: 278 GSTIPKIAIAGYTNSGKSSLINALTGAGVLV-EDALFATLDPTTRRAQLVDGRSIIFSDT 336
Query: 333 IGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKI- 391
+GF+ ++PT L+E F+ TLE+ + AD+I+HVVD S+P L+Q + V + + EE +
Sbjct: 337 VGFVRHLPTQLVEAFRSTLEEVLGADLILHVVDGSDPFPLKQIEAVRGVILDIVREEGVE 396
Query: 392 LEHVLVVGNKVDAVPPGERVTEEYDL----LISATRGTGLAQLKEKVQ 435
++V NK+D P + L +SA G G+A+L+ +++
Sbjct: 397 APPEIIVVNKIDQADPLVLAELRHALDDVAFVSARTGEGIAELESRIE 444
>gi|296139514|ref|YP_003646757.1| GTP-binding proten HflX [Tsukamurella paurometabola DSM 20162]
gi|296027648|gb|ADG78418.1| GTP-binding proten HflX [Tsukamurella paurometabola DSM 20162]
Length = 479
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 167/321 (52%), Gaps = 23/321 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G L+ V T + L Q L+ + +V V DR +++ I
Sbjct: 98 DPATYIGSGKAHELREVVLATGADT--VICDGELTPAQLNALEKVVKVKVIDRTALILDI 155
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HA +RE + Q+++A++ Y+ R R +A N G +++
Sbjct: 156 FAQHATSREGKAQVSLAQMEYMLPRLRGWGEALSRQAGGRAGSNGGVGLRGPGETKIETD 215
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R + ER KL++ + +K R+ R ++R P VA+ GYTN GK++L+ ALTD L
Sbjct: 216 RRRIRERMAKLRREIKGMKQARDTKRGARRRSGVPAVAIAGYTNAGKSSLLNALTDAGVL 275
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V +N LFATLD TT G L + +++ DT+GF+ ++PT L+E F+ TLE+ + AD+++H
Sbjct: 276 V-QNALFATLDPTTRHGTLTDGRDVVFTDTVGFVRHLPTQLVEAFRSTLEEVVDADLLVH 334
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELE-EKILEHVLVVGNKVDAVPP----GERVTEEYDL 417
VVD S+P +Q V L+ + E E L L+V NK DA P RV +
Sbjct: 335 VVDGSDPMPQRQIDAVRHVLREVAGEREAALPRELLVINKTDAADPMVLAQLRVALPEAV 394
Query: 418 LISATRGTGLAQLKEKVQDMI 438
+SA G+ +L +++ D+I
Sbjct: 395 FVSAHTREGIDELMQRMTDLI 415
>gi|183219489|ref|YP_001837485.1| GTP-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
gi|189909632|ref|YP_001961187.1| GTPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167774308|gb|ABZ92609.1| GTPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167777911|gb|ABZ96209.1| GTP-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 518
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 123/367 (33%), Positives = 195/367 (53%), Gaps = 40/367 (10%)
Query: 99 KKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRG 157
+KMKR+ + + E K L + G VVD T + D ++ GKG L E++ V
Sbjct: 165 RKMKRSP--EHSMDELKELCRT-AGIHVVD-TYVQKRDPDPRTVVGKGKLQEIILTSVHK 220
Query: 158 DARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELP 217
D + + ++ L Q K + D + + DR +++ IF +AK+R+ +LQ+ +A+L
Sbjct: 221 D--IEHLIFDLE-LTPSQAKKISDASDLKIIDRTQLILDIFSKNAKSRDGKLQVELAQLK 277
Query: 218 YLWTRYRTIEDATNMNI------------TKGFLDSKRMVLMEREQKLKKALNKLKGQRE 265
YL R ++D NM+ TK + ++R+ E+ +L+ L LK +RE
Sbjct: 278 YLKNRLSELDD--NMSRLTGGIGGRGPGETKLEIGNRRV--EEKINRLENELKDLKRRRE 333
Query: 266 MMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL 325
+ R + R + P V +VGYTN GK+TL+ ALT+ +++ ++LFATLD TT P
Sbjct: 334 LNRKSRSRNEIPIVGIVGYTNAGKSTLLNALTNS-TVIAEDKLFATLDPTTRRIRFPEER 392
Query: 326 RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL 385
I+ DT+GFI ++P L + FK TLE+ AD+++HVVDV+NP+Y +Q VD L L
Sbjct: 393 EIIISDTVGFIHDLPPDLSQAFKATLEELGDADLLLHVVDVTNPNYTEQMDAVDTILNSL 452
Query: 386 ELEEKILEHVLVVGNKVDAVPPGERVTEEYD-------LLISATRGTGLAQLKEKVQDMI 438
L E +VV NK D + E +D LL+SA GL++L + ++ I
Sbjct: 453 HLNEI---PRMVVFNKADGLD-----EETHDILQKNGALLVSAVTREGLSKLLDLIEYEI 504
Query: 439 LKATGRK 445
K +K
Sbjct: 505 WKKKEQK 511
>gi|325002639|ref|ZP_08123751.1| GTP-binding protein [Pseudonocardia sp. P1]
Length = 492
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 185/357 (51%), Gaps = 32/357 (8%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D LAE A ++ G V+D + + D +F G G ++ L VR T +
Sbjct: 65 DASLAE-LARLAETAGSEVLDGLVQRRSTPDPATFIGSGKVDELSTVVRATGADT--VIC 121
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIE 227
L Q + L++ +V V DR +++ IF HA++R+ + Q+ +A+L YL R R
Sbjct: 122 DGELSPGQLRQLEERLKVKVIDRTALILDIFAQHARSRDGKAQVELAQLSYLLPRLRGWG 181
Query: 228 DATNMNI-----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNK 270
+A + + TK LD +R + R KL++ + ++ RE R
Sbjct: 182 EALSRQVGGRAAGGVGIGGRGPGETKIELDRRR--IRARMSKLRREIGAMRQVRETQRGN 239
Query: 271 KQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYV 330
+ R + P+VA+VGYTN GK++L+ LTD LV ++ LFATLD TT P+
Sbjct: 240 RTRNEVPSVAIVGYTNAGKSSLLNQLTDAGVLV-QDSLFATLDPTTRRSETPDGRAYTLT 298
Query: 331 DTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL-ELEE 389
DT+GF+ ++P L+E F+ TLE+A AD+++HVVD S+P Q V + L + E +
Sbjct: 299 DTVGFVRHLPHQLVEAFRSTLEEAARADLLVHVVDGSDPLPDDQIAAVRQVLVEIGEEQG 358
Query: 390 KILEHVLVVGNKVDAVPPGE------RVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
+ L+V NKVDA G+ R + + +SA G+G+ +L++++ +++ +
Sbjct: 359 GTMPRELLVINKVDAA--GDLALARLRHAQPEAVFVSAHDGSGIGKLRDRIAELLPR 413
>gi|121533669|ref|ZP_01665496.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1]
gi|121307660|gb|EAX48575.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1]
Length = 597
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 154/282 (54%), Gaps = 20/282 (7%)
Query: 169 DVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY---------- 218
D L QQ+ L+ V V DR +++ IF A+TRE +LQ+ +A+L Y
Sbjct: 261 DELSPAQQRNLEQALGVKVLDRTALILDIFAQRARTREGKLQVELAQLRYNLPRLGGQGL 320
Query: 219 LWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
+ +R TK +D +R+ ER ++ + ++K R + R ++QR PT
Sbjct: 321 VLSRLGGGIGTRGPGETKLEVDKRRI--RERIADIEAEIEQIKKHRSLHRERRQRAHVPT 378
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
+A+VGYTN GK+TL+ LT+ S++ ++LFATLD TT LPN L DT+GFI
Sbjct: 379 LALVGYTNAGKSTLLNTLTNA-SVLAEDKLFATLDPTTRRLKLPNGQEALLTDTVGFIQK 437
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+P L+ F+ TLE+ + AD+++H+VD S+P Y +Q V E L+ L+ + K ++ V
Sbjct: 438 LPHQLIAAFRATLEEVVYADLLLHIVDASHPRYEEQMDSVFEVLRELQADTK---DIITV 494
Query: 399 GNKVDAVPP----GERVTEEYDLLISATRGTGLAQLKEKVQD 436
NK+D + V E + ISA G G+ L E+VQ+
Sbjct: 495 FNKIDKIENPNIIARLVRESGSVAISALTGLGIDSLLEQVQN 536
>gi|149204767|ref|ZP_01881730.1| GTP-binding protein HflX [Roseovarius sp. TM1035]
gi|149141736|gb|EDM29789.1| GTP-binding protein HflX [Roseovarius sp. TM1035]
Length = 424
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 200/398 (50%), Gaps = 34/398 (8%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLA--ESKALVSSIQGWRVVDSTIISLLSFDKKSFFG 144
+ +V+ P I N RD LA E+ AL ++ VV + + L D FG
Sbjct: 9 RAWVIHPEIDGA-----NRARDPALALEEAVALAHALPDIDVVGADTVRLRKPDAGRLFG 63
Query: 145 KGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKT 204
KG LE L + + A V V V V + QQ+ L+ + V + DR ++++IF A T
Sbjct: 64 KGKLEELHQAMEA-AEVELVLVDGPVTPV-QQRNLEKAWGVKLLDRTGLILEIFSDRAAT 121
Query: 205 REARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKL 253
RE LQ+ +A L Y R R + T++ +G +++ R + ++ +L
Sbjct: 122 REGVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDDQLVRL 179
Query: 254 KKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLD 313
++ L K+ R + R + + FP VA+VGYTN GK+TL LT D + ++ LFATLD
Sbjct: 180 RRQLEKVAKTRTLHRAARAKVPFPVVALVGYTNAGKSTLFNRLTGADVMA-KDMLFATLD 238
Query: 314 VTTHEGMLP-NRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
T LP ++ DT+GFIS++PT L+ F+ TLE+ + AD+I HV D+S+P+ +
Sbjct: 239 PTMRRVNLPEGGPEVILSDTVGFISDLPTELVAAFRATLEEVLSADLICHVRDISHPETV 298
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG-------ERVTEEYDLLISATRGT 425
Q + V L+ L + +K + + + NK+D +P + +E + ISA G
Sbjct: 299 SQSRDVATILESLGVSDKTPQ--IEIWNKIDRLPEDARAAAVTQAARQEDVIAISAISGQ 356
Query: 426 GLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMK 463
GL+ L + D + T + +R + G + WL +
Sbjct: 357 GLSDLISAIGDKLSDVTHLTEVHLRF-AEGRKRAWLFE 393
>gi|365824595|ref|ZP_09366669.1| hypothetical protein HMPREF0045_00305 [Actinomyces graevenitzii
C83]
gi|365259655|gb|EHM89640.1| hypothetical protein HMPREF0045_00305 [Actinomyces graevenitzii
C83]
Length = 525
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 182/352 (51%), Gaps = 29/352 (8%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
++ L E AL + G +V+D+ + + D ++ G G + L Q+ D V
Sbjct: 109 EYSLRELAALAET-AGSQVLDALLQRRDTPDPATYLGSGKAKELA-QIVADTGADTVIAD 166
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIE 227
D L Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R
Sbjct: 167 GD-LAPSQRRALEDVVKVKVVDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWG 225
Query: 228 D----------ATNMNI-------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNK 270
+ A I TK LD +R + +R KL++ + + RE R
Sbjct: 226 ESMSRQAGGRVAAGQGIGSRGPGETKIELDRRR--IRDRMAKLRREIKAMAPARETKRGS 283
Query: 271 KQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYV 330
+QR +VA+ GYTN GK++L+ A+T +V ++ LFATLD T P+
Sbjct: 284 RQRGAIASVAIAGYTNAGKSSLLNAITGAQIMV-QDALFATLDPTVRRASTPDGRVYTLT 342
Query: 331 DTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEK 390
DT+GF+ N+P L+E F+ TLE+ AD+I+HVVD ++PD + Q V + L ++ E
Sbjct: 343 DTVGFVRNLPHELIEAFRSTLEEVAQADLILHVVDAAHPDPVGQISAVRQVLADIDGVEN 402
Query: 391 ILEHVLVVGNKVDAVPP----GERVTEEYDLLISATRGTGLAQLKEKVQDMI 438
I E LVV NK D P G R E +++SA G G+ QL E++ ++
Sbjct: 403 IPE--LVVFNKADLADPVDLVGLRTREPNSVVVSAYTGKGIEQLVERIAQLL 452
>gi|86749994|ref|YP_486490.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris HaA2]
gi|86573022|gb|ABD07579.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris HaA2]
Length = 457
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 221/461 (47%), Gaps = 44/461 (9%)
Query: 66 ESDEFKTIRDEAQTGALGTDHQVFVVQPFIKWGK------KMKRNTTRDFMLAESKALVS 119
E F D ++ G +V VV P+++ K M D L E+ L
Sbjct: 2 EPRSFDGGADRPRSATDGQTGRVIVVGPYLRVRKTDPDAGGMNAVRDSDARLDEAAGLAR 61
Query: 120 SIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKM 178
+I + ++ + + ++ GKG +E + ++G A V +D L QQ+
Sbjct: 62 AID-LEIAEAVLTPISQIRPATYLGKGKVEEILGIIKGH---EADLVVMDCALSPIQQRN 117
Query: 179 LQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF 238
L+ + V DR ++++IF AKT+E LQ+ +A L Y R R + T++ +G
Sbjct: 118 LEKAWSAKVLDRTGLILEIFGRRAKTKEGALQVELAHLNY--QRSRLVRSWTHLERQRGG 175
Query: 239 -----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
+++ R ++ +R +L+ L K++ R + R +QR + VA+VGYTN
Sbjct: 176 FGFMGGPGETQIEADRRLIGDRISRLENELKKVQATRRLHRAGRQRVPYRVVALVGYTNA 235
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GK+TL LT D + + LFATLD T LP+ + + DT+GFISN+PT L+ F
Sbjct: 236 GKSTLFNRLTRAD-VQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQLVAAF 294
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEE---KILEHVLVVGNKVDA 404
+ TLE+ + AD+I+HV D+S+ D Q++ VD L+ L +E +ILE + NK+D
Sbjct: 295 RATLEEVLEADLILHVRDISHEDAEAQERDVDAVLRQLGVEADGGRILE----IWNKIDR 350
Query: 405 VPP----------GERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG 454
P R + ++SA G G+ +L ++ + ++T+ +
Sbjct: 351 FEPEQREELRNIAARRSEDRPCFMVSAVSGEGVDELLLAIEQRLAAWRSVLDLTIDA-AD 409
Query: 455 GSEYQWLMKHTAV-SNIREDDTSAEHLLLDVVMTDVIMNKF 494
G+ WL ++ V S D A + +D DV++ +F
Sbjct: 410 GAGVSWLHRNAEVLSKELRDGRYAMTVRVDETKRDVVVERF 450
>gi|299133863|ref|ZP_07027057.1| GTP-binding proten HflX [Afipia sp. 1NLS2]
gi|298591699|gb|EFI51900.1| GTP-binding proten HflX [Afipia sp. 1NLS2]
Length = 464
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 210/414 (50%), Gaps = 38/414 (9%)
Query: 84 TDHQVFVVQPFIKW---GKKMKRNTT---RD--FMLAESKALVSSIQGWRVVDSTIISLL 135
T +V VV P+ + G + N+ RD L E+ L +I VV++ I L
Sbjct: 22 TASRVLVVGPYRRLRRGGADLVSNSNDAIRDPQARLDEAVGLARAID-LVVVEALIAPLS 80
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
++ G G +E + ++ A + V L QQ+ L+ + V V DR +++
Sbjct: 81 EIRPATYLGTGKVEEILGLIK--AHEVELVVMDCALSPIQQRNLEKEWNVKVLDRTGLIL 138
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRM 244
+IF AKTRE LQ+ +A L ++ R R + T++ +G +++ R
Sbjct: 139 EIFGRRAKTREGTLQVELAHL--IYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRR 196
Query: 245 VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVP 304
++ ER +++ L K++ R + R +QR + VA+VGYTN GK+TL LT D +
Sbjct: 197 MIGERITRIENDLKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRAD-VQA 255
Query: 305 RNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
+ LFATLD T LP+ + + DT+GFIS++PT L+ F+ TLE+ + AD+I+HV
Sbjct: 256 ADMLFATLDPTLRALKLPHGGKAMISDTVGFISDLPTMLVAAFRATLEEVIEADVILHVR 315
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE----------RVTEE 414
D+S+ D Q++ VD+ L+ L ++ ++ V NK+D P E R E
Sbjct: 316 DISHEDAEAQERDVDQVLRQLNIDTDSGHRLIEVWNKIDRFSPEERENLARIAARRPPER 375
Query: 415 YDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV-RSGGSEYQWLMKHTAV 467
L+SA G G+ L E +++ + A R + +RV + G+ W+ +++ V
Sbjct: 376 PCFLVSAETGEGVEALLEAIEERL--AATRITLDLRVDATDGAGISWIHRNSEV 427
>gi|163852243|ref|YP_001640286.1| GTP-binding proten HflX [Methylobacterium extorquens PA1]
gi|218531002|ref|YP_002421818.1| GTP-binding proten HflX [Methylobacterium extorquens CM4]
gi|163663848|gb|ABY31215.1| GTP-binding proten HflX [Methylobacterium extorquens PA1]
gi|218523305|gb|ACK83890.1| GTP-binding proten HflX [Methylobacterium extorquens CM4]
Length = 471
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 225/457 (49%), Gaps = 38/457 (8%)
Query: 77 AQTGALGTDHQVFVVQPFI-KWGKKMKRNTTR-----DFMLAESKALVSSIQGWRVVDST 130
A G + + V+ P++ + +++ T + L E+ L ++I+ V +
Sbjct: 17 APEGEIAAATRTLVLGPYLTRAAQRLAPGQTETVRSDEARLDEAVGLAAAIE-LDVTRAI 75
Query: 131 IISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDR 190
+ + ++ GKG +E + ++ A + V L QQ+ L+ + V DR
Sbjct: 76 SVHIQRPRPSTYLGKGRVEEIAGLIK--AEEIGLVVMDCALSPVQQRNLEKAWGAKVIDR 133
Query: 191 YMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------L 239
++++IF A TRE LQ+ A L Y + R + T++ +G +
Sbjct: 134 TGLILEIFGRRASTREGTLQVEHAHLAY--QKSRLVRSWTHLERQRGGFGFLGGPGETQI 191
Query: 240 DSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDD 299
++ R ++ ER ++++ L + R + R + R +P VA+VGYTN GK+TL ALT
Sbjct: 192 EADRRMIQERMTRIERDLEAVTRTRGLHRKSRARVPYPIVALVGYTNAGKSTLFNALTKA 251
Query: 300 DSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADI 359
+ + ++ LFATLD T LP+ ++ DT+GFIS++PT+L+ F+ TLED + ADI
Sbjct: 252 E-VRAQDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTSLIAAFRATLEDVIEADI 310
Query: 360 IIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERV-------- 411
++HV DVS+ D Q + V+ L+ L +E E ++ V NK D + GER
Sbjct: 311 LLHVRDVSHGDTQAQAEDVEGVLRELGIEADA-ERIIEVWNKADLLDEGERTRLLNLSAA 369
Query: 412 ---TEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVS 468
+L+SA G GL +L E+++ + +A +T+ G + WL ++ V
Sbjct: 370 HRGAGPAPILVSALTGEGLPELTERIEGQVARARSTFAVTLPPEDGAA-LNWLYENAEVL 428
Query: 469 NIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSRKRG 505
+ R+ +T + L + + +F + F ++++ G
Sbjct: 429 D-RQSETGG-AIALTIRIAPEKEPRFLNRFEAAQRVG 463
>gi|340794568|ref|YP_004760031.1| GTPase [Corynebacterium variabile DSM 44702]
gi|340534478|gb|AEK36958.1| GTPase [Corynebacterium variabile DSM 44702]
Length = 483
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 178/346 (51%), Gaps = 26/346 (7%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
LAE AL + G VVD D ++ G G +E L RQV + V +
Sbjct: 81 LAELSALAET-AGSEVVDMLYQRRDKPDSGTYIGSGKVEEL-RQVVVETGADTVVADGE- 137
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA- 229
L Q L+ L V V DR M+++ IF HAK+RE + Q+ +A+L YL TR R A
Sbjct: 138 LSPGQMIALEKLLDVKVIDRTMLILDIFAQHAKSREGKAQVQLAQLEYLITRVRGWGGAL 197
Query: 230 -------TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQK 275
N G +++ R + KL++ + +K R++ R ++
Sbjct: 198 SRQAGGRAGSNGGVGLRGPGETKIEADRQRIRNDMAKLRREITGMKKARDIKRRQRDSSA 257
Query: 276 FPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGF 335
VA+ GYTN GK++L+ ALT LV + LFATLD TT L + +++ DT+GF
Sbjct: 258 VAQVAIAGYTNAGKSSLLNALTGAGVLV-EDALFATLDPTTRRAELADGRTVVFSDTVGF 316
Query: 336 ISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILE 393
I +PT L+E F+ TLE+ M AD+++HVVD S+P ++Q V++ + + E E
Sbjct: 317 IRFLPTQLVEAFRSTLEEVMAADVVLHVVDGSDPFPMEQIAAVNKVIGEIAEETGEDAPP 376
Query: 394 HVLVVGNKVDAVPP----GERVTEEYDLLISATRGTGLAQLKEKVQ 435
+LVV NKVDA P R + + +SA+ G G+A+L+ +++
Sbjct: 377 EILVV-NKVDAADPLVLADLRNRLDDVIFVSASTGEGIAELESRLE 421
>gi|331003853|ref|ZP_08327345.1| GTP-binding protein HflX [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330412045|gb|EGG91442.1| GTP-binding protein HflX [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 415
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 179/330 (54%), Gaps = 18/330 (5%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V+DS I + ++ GKG +E +K +V + T V V D L Q + L+DL
Sbjct: 39 GAIVLDSIIQTRERIHPGTYLGKGKIEEVKERVM-ELDATGV-VCDDELTPAQLRNLEDL 96
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--------MNI 234
V DR M+++ IF A T E ++Q+ +A+L + R + ++ +
Sbjct: 97 LDTKVMDRTMVILDIFAKRATTSEGKIQVELAQLKFSAARLVGLRNSLSRLGGGIGTRGP 156
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ L+ R ++ ER +LK L K++ RE++R + VA+VGYTN GK+TL+
Sbjct: 157 GEKKLEMDRRLIHERISQLKAELKKVENHRELIRKSRDENLAFNVAIVGYTNAGKSTLLN 216
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LTD ++ ++LFATLD TT + L + IL DT+GFI +P L+E FK TLE+A
Sbjct: 217 KLTDA-GILAEDKLFATLDPTTRKLKLGSGQEILVTDTVGFIRKLPHHLIEAFKSTLEEA 275
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEE 414
A+++IH+VD +N + Q V +TL+ L++ +K ++ V NK D + G + +
Sbjct: 276 KYANLLIHMVDAANEEATSQMLVVYDTLRSLDVVDK---DIITVFNKTDLMEEGMELPRD 332
Query: 415 YD----LLISATRGTGLAQLKEKVQDMILK 440
+ L +SA G G+ +LK ++D++ K
Sbjct: 333 FHADKVLKMSAKTGEGIDELKNTIEDILKK 362
>gi|254561989|ref|YP_003069084.1| GTPase [Methylobacterium extorquens DM4]
gi|254269267|emb|CAX25233.1| putative GTPase (HflX) [Methylobacterium extorquens DM4]
Length = 471
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 225/457 (49%), Gaps = 38/457 (8%)
Query: 77 AQTGALGTDHQVFVVQPFI-KWGKKMKRNTTR-----DFMLAESKALVSSIQGWRVVDST 130
A G + + V+ P++ + +++ T + L E+ L ++I+ V +
Sbjct: 17 APEGEIAAATRTLVLGPYLTRAAQRLAPGQTETVRSDEARLDEAVGLAAAIE-LDVTRAI 75
Query: 131 IISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDR 190
+ + ++ GKG +E + ++ A + V L QQ+ L+ + V DR
Sbjct: 76 SVHIQRPRPSTYLGKGRVEEIAGLIK--AEEIGLVVMDCALSPVQQRNLEKAWGAKVIDR 133
Query: 191 YMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------L 239
++++IF A TRE LQ+ A L Y + R + T++ +G +
Sbjct: 134 TGLILEIFGRRASTREGTLQVEHAHLAY--QKSRLVRSWTHLERQRGGFGFLGGPGETQI 191
Query: 240 DSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDD 299
++ R ++ ER ++++ L + R + R + R +P VA+VGYTN GK+TL ALT
Sbjct: 192 EADRRMIQERMTRIERDLEAVTRTRGLHRKSRARVPYPIVALVGYTNAGKSTLFNALTKA 251
Query: 300 DSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADI 359
+ + ++ LFATLD T LP+ ++ DT+GFIS++PT+L+ F+ TLED + ADI
Sbjct: 252 E-VRAQDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTSLIAAFRATLEDVIEADI 310
Query: 360 IIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERV-------- 411
++HV DVS+ D Q + V+ L+ L +E E ++ V NK D + GER
Sbjct: 311 LLHVRDVSHGDTQAQAEDVEGVLRELGIEADA-ERIIEVWNKADLLDEGERTRLLNLSAA 369
Query: 412 ---TEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVS 468
+L+SA G GL +L E+++ + +A +T+ G + WL ++ V
Sbjct: 370 HRGAGPAPILVSALTGEGLPELTERIEGQVARARSTFAVTLPPEDGAA-LNWLYENAEVL 428
Query: 469 NIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSRKRG 505
+ R+ +T + L + + +F + F ++++ G
Sbjct: 429 D-RQSETGG-AIALTIRIAPEKEPRFLNRFEAAQRVG 463
>gi|329930826|ref|ZP_08284225.1| GTP-binding protein HflX [Paenibacillus sp. HGF5]
gi|328934528|gb|EGG31033.1| GTP-binding protein HflX [Paenibacillus sp. HGF5]
Length = 430
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 173/327 (52%), Gaps = 25/327 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F GKG +E L+ + G TA+F L Q + L++ V + DR +++ I
Sbjct: 63 DSKWFIGKGKVEELRMAIDGLGATTAIFDQE--LSGAQVRNLEESLDVKIIDRTQLILDI 120
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN------ITKGFLDSK----RMVLM 247
F AKTRE +Q+ +A+L YL R N++ T+G +SK R +
Sbjct: 121 FAQRAKTREGIIQVELAQLTYLLPRLSG--HGKNLSRLGAGIGTRGPGESKLETDRRHIR 178
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
+R LK+ L+++ R + R ++++ +A+VGYTN GK+TL+ LT D + NQ
Sbjct: 179 DRISDLKRQLDEVTRHRTLHRERRKKSGAVQIALVGYTNAGKSTLLNRLTAADVYI-ENQ 237
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T+ LP+ ++ DT+GFI N+P L+ F+ TLE+A AD+I+HVVD S
Sbjct: 238 LFATLDPTSRVLELPSGKEVVLTDTVGFIQNLPHDLVAAFRATLEEANEADLILHVVDAS 297
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE---RVTEEYDLLISATRG 424
+P +Q V LQ L +K +V+ NK DA PG+ T E L ISA
Sbjct: 298 SPMRDEQMAVVQSILQDLGAADK---PQIVLFNKKDACEPGQLEMLPTGEGHLKISAYVD 354
Query: 425 TGLAQLKEKVQDMILKATGRKNITMRV 451
L ++E +QD + N+T R+
Sbjct: 355 EDLESVREAIQDRLSGG----NVTFRI 377
>gi|227504875|ref|ZP_03934924.1| GTP-binding protein HflX [Corynebacterium striatum ATCC 6940]
gi|227198566|gb|EEI78614.1| GTP-binding protein HflX [Corynebacterium striatum ATCC 6940]
Length = 486
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 203/403 (50%), Gaps = 37/403 (9%)
Query: 63 DLEESDEFK----TIRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTR-DFMLAESKAL 117
DL E + F+ TIR E T +++ ++ + G + + +AE AL
Sbjct: 27 DLAERNSFRRVSTTIRAEDTTDGYEVEYRKLRLEQVVLVGVWTEGTVAEVEATMAELAAL 86
Query: 118 VSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQK 177
+ G VV++ D ++ G+G ++ LK V +A + L+ Q
Sbjct: 87 TET-AGAEVVEAIYQRRDKPDPGTYIGRGKVQELKEIV--EATGADTVICDGELQPGQLS 143
Query: 178 MLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKG 237
L+ V DR M+++ IF HAK++E + Q+++A+L YL+T R N++ G
Sbjct: 144 ALERELNTKVIDRTMLILDIFAQHAKSKEGKAQVSLAQLEYLYTHTRGW--GGNLSRQAG 201
Query: 238 F-----------------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
++S R + +L+K L +K RE+ R+K+Q P +A
Sbjct: 202 GRAGSNGGVGLRGPGETKIESDRRRIRTEMARLRKELRGMKTAREVKRSKRQSSTIPQIA 261
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+ GYTN GK++LI A+T LV + LFATLD TT L + ++++ DT+GF+ ++P
Sbjct: 262 IAGYTNAGKSSLINAMTGAGVLV-EDALFATLDPTTRRAELADGRQVVFTDTVGFVRHLP 320
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVV 398
T L+E FK TLE+ + ADI++HVVD S+P ++Q + V++ + + E E+ ++V+
Sbjct: 321 TQLVEAFKSTLEEVLAADIMLHVVDGSDPFPIKQIEAVNKVIYDIVKETGEQAPPEIIVI 380
Query: 399 GNKVDAVPP------GERVTEEYDLLISATRGTGLAQLKEKVQ 435
NK+D P + E + +SA G G+ +L +++
Sbjct: 381 -NKIDQADPLVLAEIRHVLDHENVVYVSAHTGEGIDELTSRIE 422
>gi|395767148|ref|ZP_10447683.1| GTP-binding protein HflX [Bartonella doshiae NCTC 12862]
gi|395414461|gb|EJF80903.1| GTP-binding protein HflX [Bartonella doshiae NCTC 12862]
Length = 447
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 191/365 (52%), Gaps = 26/365 (7%)
Query: 86 HQVFVVQPFIK-WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFG 144
H V +V F K + + R + + E+ L +I G VV I++ + + FG
Sbjct: 20 HAVVLVPIFQKNTNENVLRECSVSSRVKEALGLAHAI-GLNVVHYEAINISAPRPATLFG 78
Query: 145 KGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKT 204
KG ++ L + + + V L QQ+ L+ L+ V DR ++++IF A+T
Sbjct: 79 KGKVDALANYI-NEYHIELAIVD-HFLTPVQQRNLEKLWNCKVIDRTALILEIFGDRART 136
Query: 205 REARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKL 253
+E LQ+ +A L Y + R + T++ +G +++ R +L E+ ++
Sbjct: 137 KEGVLQVELAHLSY--QKSRLVRSWTHLERQRGGRGFLGGPGETQIEADRRLLQEKIVRI 194
Query: 254 KKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLD 313
++ L + R + R K+++ +P VA+VGYTN GK+TL L+ D L ++ LFATLD
Sbjct: 195 RRELATVVKTRALHRAKRKKSSYPVVALVGYTNAGKSTLFNRLSGADGLA-KDMLFATLD 253
Query: 314 VTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQ 373
T + +LP+ IL DT+GFISN+PT L+ F+ TLE+ + AD+I+HV D+S+ D+
Sbjct: 254 PTLRKVVLPHGKAILLSDTVGFISNLPTNLIAAFRATLEEVIEADLILHVRDMSDFDHRA 313
Query: 374 QKQHVDETLQHLELEEKILEHVLVVGNKVD--------AVPPGERVTEEYDLLISATRGT 425
Q V E L L ++ EH++ V NK+D A+ + +++SA G
Sbjct: 314 HGQDVLEVLSSLGIDIDDAEHIIEVWNKIDLLDEHVLNALQINAKTRLNSTVMVSALTGE 373
Query: 426 GLAQL 430
GL+QL
Sbjct: 374 GLSQL 378
>gi|452750887|ref|ZP_21950634.1| GTP-binding protein HflX [alpha proteobacterium JLT2015]
gi|451962081|gb|EMD84490.1| GTP-binding protein HflX [alpha proteobacterium JLT2015]
Length = 414
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 204/411 (49%), Gaps = 32/411 (7%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E+ AL ++I V D I+ + + + FG G +E+L R +A + V
Sbjct: 18 LEEAVALSAAIS-LDVADKDIVRVRAPRPATLFGSGQVEMLT--ARAEASDAELIVVDGA 74
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
L QQ+ L+ V DR ++++IF A T E RLQ+ +A L Y +R + T
Sbjct: 75 LSPLQQRNLEKETGRKVIDRTGLILEIFGERAATHEGRLQVELAHLEYQASRL--VRSWT 132
Query: 231 NMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +G +++ R ++ +R K+++ L ++ R + R ++Q+ +P V
Sbjct: 133 HLERQRGGFGFLGGPGETQIETDRRLIRDRMAKIRRELEQVTRTRTLHRERRQKAPYPIV 192
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL LT +++ ++ LFATLD T +P +++ DT+GF+S++
Sbjct: 193 ALVGYTNAGKSTLFNRLTGA-TVMAKDLLFATLDPTMRSISIPGFDKVIMSDTVGFVSDL 251
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+ F+ TLE+ + AD+I+HV DV++PD Q V TL L +E +L V
Sbjct: 252 PTQLVAAFRATLEEVLEADLIVHVRDVAHPDTDAQAADVMRTLADLGVEPGGDVPILDVL 311
Query: 400 NKVDAVPPGER---VTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG-G 455
NK+D +PP R + +SA G G+ + + + T + +G G
Sbjct: 312 NKIDLLPPDRRDALAGRPDTVAVSALTGEGVEHFLNVLSARL--SPDETVYTFDISAGDG 369
Query: 456 SEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKH-EFISSRKRG 505
+ WL +H V R ++ D V +V ++ H F+S R G
Sbjct: 370 ARLAWLERHGRVLGRRMEN--------DHVHVEVALSALDHGRFLSLRPGG 412
>gi|427392529|ref|ZP_18886534.1| GTP-binding protein HflX [Alloiococcus otitis ATCC 51267]
gi|425731490|gb|EKU94308.1| GTP-binding protein HflX [Alloiococcus otitis ATCC 51267]
Length = 418
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 198/391 (50%), Gaps = 23/391 (5%)
Query: 102 KRNTTRDF--MLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDA 159
K T DF L E + LV++ G RVV S D+K+F GKG L+ +K V +A
Sbjct: 16 KEETDYDFHYSLDELENLVNNAHG-RVVGRISQKRDSLDQKTFVGKGKLKEIKDLV--EA 72
Query: 160 RVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYL 219
+ + L + +QD V V DR +++ IF A+++ RLQ+ +A+L YL
Sbjct: 73 KDATCLIFNQELSPSHVRNIQDFINVKVLDRIQVILDIFAMRAQSKAGRLQVELAQLNYL 132
Query: 220 WTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKK 271
R R + L++ R + ++ +KK L KL R+ R K+
Sbjct: 133 LPRLAGQGENLSRLGGGIGTRGPGETKLETDRRHIQKQISDIKKELVKLADHRKRSRQKR 192
Query: 272 QRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVD 331
Q + + ++GYTN GK+TL+ LT SL ++ LFATLD T + LP+ L++ D
Sbjct: 193 QESQIVQIGLIGYTNAGKSTLLNKLTGSQSL-EKDILFATLDPITRQLTLPSGLQVTLTD 251
Query: 332 TIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKI 391
T+GFI ++PT L+E FK TLE++ ADI++H+VD S+P+ + Q+ V L+ L++E+
Sbjct: 252 TVGFIKDLPTQLIESFKSTLEESRQADILLHLVDASSPNRVSQEDTVVALLEDLDMEDI- 310
Query: 392 LEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILK---ATGRKNIT 448
L V NK D + +LLISA + LK +++ ++ AT + ++
Sbjct: 311 --PRLTVYNKKDKLDQAFTPLAFPNLLISALDDQDITYLKSSIENFLMDQIMATYQVDLP 368
Query: 449 MRVRSGGSEYQWLMKHTAVSNIREDDTSAEH 479
S G Y L + T V + D T+ +
Sbjct: 369 A---SRGDIYSALQQGTIVKKEKFDKTNQSY 396
>gi|323486669|ref|ZP_08091990.1| hypothetical protein HMPREF9474_03741 [Clostridium symbiosum
WAL-14163]
gi|323400050|gb|EGA92427.1| hypothetical protein HMPREF9474_03741 [Clostridium symbiosum
WAL-14163]
Length = 418
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 181/334 (54%), Gaps = 20/334 (5%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G VD I + ++ GKG +E ++ +V + T V D L Q + L++
Sbjct: 42 GAVTVDKIIQNRERIHPGTYLGKGKIEEVRERV-FELGATGVICD-DELSPAQLRNLENA 99
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--------MNI 234
V DR M+++ IF +HA T E ++Q+ +A+L Y R + ++ +
Sbjct: 100 LDTKVMDRTMVILDIFASHAVTSEGKIQVELAQLKYRAARLVGLRNSLSRLGGGIGTRGP 159
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ L+ R ++ +R +LK L ++K RE+ R ++ R + A+VGYTN GK+TL+
Sbjct: 160 GEKKLEVDRRLIHDRIGQLKAELLEVKRHREVARKQRDRNYTLSAAIVGYTNAGKSTLLN 219
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT ++ ++LFATLD TT LP+ +IL DT+GFI +P L+E F+ TLE+A
Sbjct: 220 KLTGA-GILAEDKLFATLDPTTRGMELPSGQKILLTDTVGFIRKLPHHLIEAFRSTLEEA 278
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG---ERV 411
+DII+HVVD +P Q V ETL+ LE+++K ++ V NK+D + + +
Sbjct: 279 RYSDIILHVVDCVSPQMDSQIHIVYETLRKLEIKDKT---IVTVFNKIDCLEQEVILKDL 335
Query: 412 TEEYDLLISATRGTGLAQLKEKVQDMILKATGRK 445
+Y + ISA G GL +L E + + IL+ GRK
Sbjct: 336 QSDYQVKISARTGEGLEELTE-ILETILR--GRK 366
>gi|385240817|ref|YP_005808658.1| GTP binding protein [Chlamydia trachomatis G/11222]
gi|296436825|gb|ADH18995.1| GTP binding protein [Chlamydia trachomatis G/11222]
Length = 447
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 154/281 (54%), Gaps = 21/281 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ +V V DR ++++IF + A T EA LQ+ +A+ YL R++ +
Sbjct: 113 QQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLPRFKRMWGHLSRQK 172
Query: 227 EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
+ KG ++ R ++ ER KL + L ++ QRE R K+R + PT A++
Sbjct: 173 SGGSGGGFVKGEGEKQIELDRRIVRERIHKLSRDLKNVERQREERRKAKKRNQIPTFALI 232
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ LT D+ V N+LFATLD T +LP R+L DT+GFI +P T
Sbjct: 233 GYTNSGKSTLLNLLTSADTYV-ENKLFATLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHT 291
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+ FK TLE A+ DI++HVVD S+P L+ + LQ L + + V+ V NK+
Sbjct: 292 LVAAFKSTLEAALQEDILLHVVDASHPLALEYVETTKAILQELGITQP---QVITVLNKM 348
Query: 403 DAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMI 438
D V G R+ + +SA G G+ +L ++DM+
Sbjct: 349 DKVADGVTASRLRLMSPNPVCVSAKTGEGIRELLRSMEDMV 389
>gi|254421034|ref|ZP_05034758.1| GTP-binding proten HflX [Brevundimonas sp. BAL3]
gi|196187211|gb|EDX82187.1| GTP-binding proten HflX [Brevundimonas sp. BAL3]
Length = 437
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 189/371 (50%), Gaps = 28/371 (7%)
Query: 131 IISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDR 190
I+ L + FG G +E L VR A AV + D L QQ+ L+ ++V V DR
Sbjct: 53 IVRLRGTTPATLFGSGKVEELAALVRA-ADAEAVIID-DALTPVQQRNLEKAWEVKVIDR 110
Query: 191 YMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------L 239
++++IF A+T+E RLQ+ +A L Y R R + T++ +G +
Sbjct: 111 TGLILEIFGRRARTKEGRLQVELARLDY--ERSRLVRTWTHLERQRGGTGSTGGPGETQI 168
Query: 240 DSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDD 299
+ R ++ +R +LK L +++ R + R ++Q+ FPT+A+VGYTN GK+TL LT
Sbjct: 169 ELDRRLIADRIVRLKAELEEVRRTRGLHRKQRQKVPFPTIALVGYTNAGKSTLFNRLTGS 228
Query: 300 DSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADI 359
+ + ++ LFATLD T LP + DT+GFIS++P L+E F+ TLE+ AD+
Sbjct: 229 E-VFAKDLLFATLDTTQRTIRLPQGRPAIVADTVGFISDLPHELVESFRATLEEVGEADL 287
Query: 360 IIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD---------AVPPGER 410
I+HV D+++ D Q + V+ L+ +E E VL V NK+D + ER
Sbjct: 288 ILHVRDIASADSDAQAKDVETVLKQIETPEGKTRRVLEVWNKIDLLDDEAREAVLGQAER 347
Query: 411 VTEEYD-LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSN 469
+ + + + +SA G G+ L++ + +I +T+ G + WL +H V
Sbjct: 348 LAKTGEAVAVSAWTGEGIEPLRQTIAGLI-DDDPETRLTLEPDQGEA-LAWLYEHGRVVF 405
Query: 470 IREDDTSAEHL 480
DD H+
Sbjct: 406 RDTDDAGRTHV 416
>gi|374294463|ref|YP_005041488.1| putative GTP-binding protein (HflX-like) [Azospirillum lipoferum
4B]
gi|357428461|emb|CBS91419.1| Putative GTP-binding protein (HflX-like) [Azospirillum lipoferum
4B]
Length = 448
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 207/416 (49%), Gaps = 32/416 (7%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ V+ P ++ G + R+ + L E+ L ++I+ V + ++ + + G G
Sbjct: 21 RALVLHPVLR-GTETDRSP--EASLEEAVGLAAAIE-LEVAQAAVVKVNQPRPATLLGGG 76
Query: 147 NLELLKRQVRGDARVTAV---FVSVD-VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHA 202
+E + + DAR V VD L QQ+ L+ F V DR ++++IF A A
Sbjct: 77 AIEQYAKLL-DDAREAGEDIDLVIVDHALTPVQQRNLEKAFGTKVIDRTGLILEIFGARA 135
Query: 203 KTREARLQIAIAELPY-------LWT---RYRTIEDATNMNITKGFLDSKRMVLMEREQK 252
+T E +LQ+ +A L Y WT R R + L+ R ++ R K
Sbjct: 136 RTHEGQLQVELASLTYQKSRLVRSWTHLERQRGGF-GFLGGPGESQLEIDRRLIGNRIVK 194
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
+K+ L+ ++ R + R + + +P VA+VGYTN GK+TL + D + +N LFATL
Sbjct: 195 IKRELDDVRRTRGLHRKARAKVPYPVVALVGYTNAGKSTLFNRMAGAD-VFAKNLLFATL 253
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D T + +LP+ +++ DT+GFIS++PT L+ F+ TLE+ ADII+HV D+++PD
Sbjct: 254 DPTMRQVVLPSGRKVILSDTVGFISDLPTHLVAAFRATLEEVQSADIILHVRDIAHPDTE 313
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE------RVTEEYD-LLISATRGT 425
QK V+ L L ++ + V+ V NK+D + E R + +SA G
Sbjct: 314 AQKADVEAILTDLGIDPERDPRVVEVSNKIDLLDGAELDAVLARAGRSGNTCAVSAATGD 373
Query: 426 GLAQLKEKVQDMILKATGRKNITMRVRSG-GSEYQWLMKHTAVSNIREDDTSAEHL 480
L L + D + GR+ + + V G G+ WL H V R+DD+ A HL
Sbjct: 374 RLDTLFRILDDRM--TAGRELVELDVEHGDGATLAWLYAHGEVIGRRDDDSHA-HL 426
>gi|163746239|ref|ZP_02153597.1| GTP-binding protein HflX, putative [Oceanibulbus indolifex HEL-45]
gi|161380124|gb|EDQ04535.1| GTP-binding protein HflX, putative [Oceanibulbus indolifex HEL-45]
Length = 432
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 191/371 (51%), Gaps = 26/371 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VV + ++ L + FGKG +E L+++++ A V V V V + QQ+ L+ + V
Sbjct: 54 VVGAEVVPLRTVHAGMLFGKGKIEELEQRMKA-AEVELVLVDGPVTPV-QQRNLEKAWGV 111
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
+ DR ++++IF A TRE LQ+ +A L Y R R + T++ +G
Sbjct: 112 KLLDRTGLILEIFSDRAATREGVLQVEMAALNY--QRTRLVRAWTHLERQRGGLGFVGGP 169
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+++ R + ++ +L++ L K+ R + R + + FP VA+VGYTN GK+TL
Sbjct: 170 GETQIEADRRAIDDQLVRLRRQLEKVVKTRALHRAARAKVPFPIVALVGYTNAGKSTLFN 229
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT + + ++ LFATLD T +LP+ I+ DT+GFIS++PT L+ F+ TLE+
Sbjct: 230 RLTGAEVMA-KDMLFATLDPTMRSLVLPDGPEIILSDTVGFISDLPTELVASFRATLEEV 288
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEE 414
+ ADII HV DVS+ + +Q Q+V + L L + ++ V NK+D +P
Sbjct: 289 LAADIICHVRDVSHAETEEQAQNVRDILASLGVPKET--RSFEVWNKLDLLPEDRADAMR 346
Query: 415 Y------DLL-ISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
DLL ISA G GL L+E + + + A +T+ S G + WL V
Sbjct: 347 ARAARNDDLLAISAITGEGLEALQETIAEALQGAVREAVLTLGF-SDGKKRAWLFAQDVV 405
Query: 468 SNIREDDTSAE 478
R+ + E
Sbjct: 406 EGERQTEDGFE 416
>gi|440533331|emb|CCP58841.1| GTPase HflX [Chlamydia trachomatis Ia/SotonIa1]
gi|440534225|emb|CCP59735.1| GTPase HflX [Chlamydia trachomatis Ia/SotonIa3]
Length = 447
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 21/281 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ +V V DR ++++IF + A T EA LQ+ +A+ YL R + +
Sbjct: 113 QQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLPRLKRMWGHLSRQK 172
Query: 227 EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
+ KG ++ R ++ ER KL + L ++ QRE R K+R + PT A++
Sbjct: 173 SGGSGGGFVKGEGEKQIELDRRIVRERIHKLSRDLKNVERQREERRKAKKRNQIPTFALI 232
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ LT D+ V N+LFATLD T +LP R+L DT+GFI +P T
Sbjct: 233 GYTNSGKSTLLNLLTSADTYV-ENKLFATLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHT 291
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+ FK TLE A+ DI++HVVD S+P L+ + LQ L + + V+ V NK+
Sbjct: 292 LVAAFKSTLEAALQEDILLHVVDASHPLALEHVETTKAILQELGITQP---QVITVLNKI 348
Query: 403 DAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMI 438
D V G R+ + +SA G G+ +L ++DM+
Sbjct: 349 DKVADGVTASRLRLMSPNPVCVSAKTGEGIRELLRSMEDMV 389
>gi|390448826|ref|ZP_10234443.1| GTP-binding proten HflX [Nitratireductor aquibiodomus RA22]
gi|389665420|gb|EIM76888.1| GTP-binding proten HflX [Nitratireductor aquibiodomus RA22]
Length = 457
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 160/283 (56%), Gaps = 23/283 (8%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
QQ+ L+ + V DR ++++IF A+T+E RLQ+ +A L Y R R + T++
Sbjct: 115 QQRNLEKALKAKVLDRTGLILEIFGRRARTKEGRLQVDLAHLEY--QRGRLVRSWTHLER 172
Query: 235 TKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVG 283
+G +++ R L ER +LKK L +++ R++ R K+++ FP +A+VG
Sbjct: 173 QRGGGGFMGGPGETQIEADRRQLQERIMRLKKDLEQVRRTRDLHRAKRRKVPFPIIAIVG 232
Query: 284 YTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTL 343
YTN GK+TL LT S++ + LFATLD T LP+ I+ DT+GFIS++PT L
Sbjct: 233 YTNAGKSTLFNRLTGA-SVMAEDMLFATLDPTLRRVQLPHGTTIILSDTVGFISDLPTHL 291
Query: 344 LEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+ F+ TLE+ + AD+I+H+ D+S+PD Q V+ L L ++ + VL V NK+D
Sbjct: 292 VAAFRATLEEVIEADLIVHLRDISDPDTAAQAMDVEAILGDLGVDAADRKRVLEVWNKID 351
Query: 404 AVPP--------GERVTEEYDLLISATRGTGLAQLKEKVQDMI 438
++ P G R + + L ISA G G++ L +++ I
Sbjct: 352 SLDPERRRALLEGTRAS-DAPLAISAITGEGISDLLALIEERI 393
>gi|373857385|ref|ZP_09600127.1| GTP-binding proten HflX [Bacillus sp. 1NLA3E]
gi|372453035|gb|EHP26504.1| GTP-binding proten HflX [Bacillus sp. 1NLA3E]
Length = 419
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 173/312 (55%), Gaps = 23/312 (7%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG +E LK D + + D L Q + L V DR +++ IF
Sbjct: 58 TYIGKGKIEELK--ALEDELEPDLIIFNDELSSTQIRNLSRELDARVIDRTQLILDIFAT 115
Query: 201 HAKTREARLQIAIAELPYLWTRYRTIEDATNMNI------TKGF----LDSKRMVLMERE 250
A+++E +LQ+ A+L Y+ R + T+M+ T+G L+S R + R
Sbjct: 116 RARSKEGKLQVEYAQLQYMLPRL--VGQGTSMSRLGAGIGTRGPGETKLESDRRHIRRRI 173
Query: 251 QKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFA 310
+K L + G R+ R ++++ K +A+VGYTN GK+TL LT+ D+L NQLFA
Sbjct: 174 DDIKSQLTVIVGHRDRYRERRKKNKAFQIAIVGYTNAGKSTLFNRLTEADTL-EENQLFA 232
Query: 311 TLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPD 370
TLD TT + +LP+ L DT+GF+ ++PTTL+ F+ TLE+ AD+++HVVD SNPD
Sbjct: 233 TLDPTTRKMILPSGFTTLTTDTVGFLQDLPTTLIAAFRSTLEEVNEADLLLHVVDCSNPD 292
Query: 371 YLQQKQHVDETLQHLELEEKILEHV--LVVGNKVDAVPPG-ERVTEEYDLLISATRGTGL 427
Y Q ++T+QHL LEE +H+ L V NK D + P V + + ISA
Sbjct: 293 YFQH----EKTVQHL-LEELENQHLPQLTVYNKKDMMQPDFVPVAKTETITISAFEEEDR 347
Query: 428 AQLKEKVQDMIL 439
+LK+KV++M+L
Sbjct: 348 QKLKQKVEEMVL 359
>gi|383807195|ref|ZP_09962756.1| putative ATP/GTP-binding protein [Candidatus Aquiluna sp.
IMCC13023]
gi|383299625|gb|EIC92239.1| putative ATP/GTP-binding protein [Candidatus Aquiluna sp.
IMCC13023]
Length = 477
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 175/341 (51%), Gaps = 31/341 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D + D S+FGKG E L+ V+ V A V D L
Sbjct: 83 AALAETAGAEVLDGLLQRRAKPDPASYFGKGKAEELRELVK---EVGADTVIADAELAPS 139
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR I++ IF HAK++E + Q+ +A+L YL R R ++ +
Sbjct: 140 QRRTLEDIVKVKVVDRTAIILDIFAQHAKSKEGKAQVELAQLEYLLPRLRGWGESMSRQA 199
Query: 235 -----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
TK LD +R + + KL++ + +K R+ R K+++ + P
Sbjct: 200 GGQAAGGVGIGSRGPGETKIELDRRR--INTKMAKLRREIALMKSARDTKRLKREKARVP 257
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
VA+ GYTN GK++L+ LT LV N LFATLD T P+ DT+GF+
Sbjct: 258 QVAIAGYTNAGKSSLLNRLTKAGVLV-ENALFATLDPTIRRHETPDGRSYTLADTVGFVR 316
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
++P L+E F+ TLE+ AD+I+HVVD ++PD L Q Q V L E++ +E L+
Sbjct: 317 SLPHQLVEAFRSTLEEIAGADLIVHVVDATDPDPLGQIQTV--RLVVAEVDASAIEE-LI 373
Query: 398 VGNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKV 434
V NK D V E R L+S+ G G+A+L+ +
Sbjct: 374 VFNKADLVSEEEHIRLRGLCPGAFLVSSRTGLGIAELEAAI 414
>gi|119386828|ref|YP_917883.1| small GTP-binding protein [Paracoccus denitrificans PD1222]
gi|119377423|gb|ABL72187.1| GTP-binding protein HflX [Paracoccus denitrificans PD1222]
Length = 435
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 202/406 (49%), Gaps = 33/406 (8%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ +V+ P + G R + D L E+ AL ++ V + + L + D F KG
Sbjct: 13 RAYVIHPDL--GNSRTRRSP-DLALEEAVALAHALPAIEVTGAEVARLRNPDPGMLFSKG 69
Query: 147 NLELLKRQVRGDARVTA---VFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAK 203
E + + + A V + V + QQ+ L+ + V + DR ++++IF A+
Sbjct: 70 KREEIGQHLEAAAAGEGAELVLIDGPVTPV-QQRNLEKEWGVKILDRTGLILEIFADRAQ 128
Query: 204 TREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQK 252
TRE LQ+ +A L Y R R + T++ +G +++ R + E+ +
Sbjct: 129 TREGVLQVELAALAY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDEQVVR 186
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
L++ L ++ RE+ R + + +P VA+VGYTN GK+TL LT + L ++QLFATL
Sbjct: 187 LRRQLERVVKTRELHRKARAKVPYPIVALVGYTNAGKSTLFNRLTGAEVLA-QDQLFATL 245
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D T + LP R++ DT+GFIS++P L+ F+ TLE+ + AD+I+HV D+S+P+
Sbjct: 246 DPTMRQLTLPGGRRVILSDTVGFISDLPHELVAAFRATLEEVLAADLILHVRDISHPETE 305
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT-EEYDL------LISATRGT 425
+Q V E L L +EE + ++ V NK+DA+ P R + D ISA G
Sbjct: 306 EQAGDVGEILDSLGVEEDV--PLIEVWNKIDALSPETRAALQRTDARTQGVQAISALSGE 363
Query: 426 GLAQLKEKVQDM---ILKATGRKNITMRVRSGGSEYQWLMKHTAVS 468
GL L ++ +L R+ + S G WL + ++
Sbjct: 364 GLDTLLAAIEARLAEVLDEPRREAELVLPHSDGRRRAWLHEQGVIT 409
>gi|255311185|ref|ZP_05353755.1| GTP binding protein [Chlamydia trachomatis 6276]
gi|255317486|ref|ZP_05358732.1| GTP binding protein [Chlamydia trachomatis 6276s]
gi|440525297|emb|CCP50548.1| GTPase HflX [Chlamydia trachomatis K/SotonK1]
Length = 447
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 21/281 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ +V V DR ++++IF + A T EA LQ+ +A+ YL R + +
Sbjct: 113 QQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLPRLKRMWGHLSRQK 172
Query: 227 EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
+ KG ++ R ++ ER KL + L ++ QRE R K+R + PT A++
Sbjct: 173 SGGSGGGFVKGEGEKQIELDRRIVRERIHKLSRDLKNVERQREERRKAKKRNQIPTFALI 232
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ LT D+ V N+LFATLD T +LP R+L DT+GFI +P T
Sbjct: 233 GYTNSGKSTLLNLLTSADTYV-ENKLFATLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHT 291
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+ FK TLE A+ DI++HVVD S+P L+ + LQ L + + V+ V NK+
Sbjct: 292 LVAAFKSTLEAALQEDILLHVVDASHPLALEHVETTKAILQELGITQP---QVITVLNKI 348
Query: 403 DAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMI 438
D V G R+ + +SA G G+ +L ++DM+
Sbjct: 349 DKVADGVTASRLRLMSPNPVCVSAKTGEGIRELLRSMEDMV 389
>gi|373124946|ref|ZP_09538784.1| GTP-binding protein HflX [Erysipelotrichaceae bacterium 21_3]
gi|371658167|gb|EHO23449.1| GTP-binding protein HflX [Erysipelotrichaceae bacterium 21_3]
Length = 417
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 194/388 (50%), Gaps = 24/388 (6%)
Query: 133 SLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYM 192
+L S +++ G G E + ++ + + V + D+ L Q + L+++ Q PV DR
Sbjct: 39 NLKSITLRTYIGTGKCEEIHAYLQ-EQEIQRVVFNHDLSPL-QIRNLEEILQTPVMDRTE 96
Query: 193 IVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRM 244
+++ IF++ A TR ARLQI A L L R R N + L+ R
Sbjct: 97 LILAIFESRAVTRTARLQIECAHLKKLLPRLIGANTQLGRQSGSGKNKGAGEKQLELDRR 156
Query: 245 VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKAL-------T 297
+ R Q+L++ L K++ QR R +Q+ P V++VGYTN GK+T++ L
Sbjct: 157 RINARIQELQRELKKIEAQRFNQRRARQKSMLPLVSLVGYTNAGKSTIMNMLLEHSSPYE 216
Query: 298 DDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLA 357
+D ++ ++ LFATLD + LP+ L DT+GF+S++P L+E F TLE+ A
Sbjct: 217 EDKKVLEKDMLFATLDTSIRHIDLPDGKSFLLSDTVGFVSDLPHDLVEAFHSTLEEVQYA 276
Query: 358 DIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDL 417
+++ VVDVS+ +Y +Q + ETLQ ++ + + + V NK D +DL
Sbjct: 277 SLLVQVVDVSSEEYARQMEITQETLQQIKAADIPM---ITVYNKCDQSGYQYPQVHAHDL 333
Query: 418 LISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSA 477
+SA GL +L + + + + + + G Y LMKH V + R D+
Sbjct: 334 YMSAKEKAGLQELLDLIHSHLYPDEKHVELHIPYQQTGI-YSLLMKHAHVIS-RRDEEDG 391
Query: 478 EHLLLDVVMTDVIMNKFKHEFISSRKRG 505
H LD V++D + K+++ I ++ G
Sbjct: 392 IH--LDAVLSDTLYQKYRNYVICLKEEG 417
>gi|346316287|ref|ZP_08857793.1| GTP-binding protein HflX [Erysipelotrichaceae bacterium 2_2_44A]
gi|345903470|gb|EGX73235.1| GTP-binding protein HflX [Erysipelotrichaceae bacterium 2_2_44A]
Length = 417
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 195/388 (50%), Gaps = 24/388 (6%)
Query: 133 SLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYM 192
+L S +++ G G E ++ ++ + + V + D+ L Q + L++ Q PV DR
Sbjct: 39 NLKSITLRTYIGTGKCEEIRAYLQ-EQEIQRVVFNHDLSPL-QIRNLEESLQTPVMDRTE 96
Query: 193 IVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRM 244
+++ IF++ A TR ARLQI A+L L R R N + L+ R
Sbjct: 97 LILAIFESRAVTRTARLQIECAQLKKLLPRLIGANTQLGRQSGSGKNKGAGEKQLELDRR 156
Query: 245 VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKAL-------T 297
+ R Q+L++ L K++ QR R +Q+ P V++VGYTN GK+T++ L
Sbjct: 157 RINARIQELQRELKKIEAQRFNQRRARQKSMLPLVSLVGYTNAGKSTIMNMLLEHSSPYE 216
Query: 298 DDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLA 357
+D ++ ++ LFATLD + LP+ L DT+GF+S++P L+E F TLE+ A
Sbjct: 217 EDKKVLEKDMLFATLDTSIRHIDLPDGKSFLLSDTVGFVSDLPHDLVEAFHSTLEEVQYA 276
Query: 358 DIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDL 417
+++ VVDVS+ +Y +Q + ETLQ ++ + + + V NK D +DL
Sbjct: 277 SLLVQVVDVSSEEYARQMEITQETLQQIKAADIPM---ITVYNKCDQSGYQYPQVHAHDL 333
Query: 418 LISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSA 477
+SA GL +L + + + + + + G Y LMKH V + R D+
Sbjct: 334 YMSAKEKAGLQELLDLIHSHLYPDEKHVELHIPYQQTGI-YSLLMKHAHVIS-RRDEEDG 391
Query: 478 EHLLLDVVMTDVIMNKFKHEFISSRKRG 505
H LD V++D + K+++ I ++ G
Sbjct: 392 IH--LDAVLSDTLYQKYRNYVICLKEEG 417
>gi|163868472|ref|YP_001609681.1| GTP-binding protein HflX [Bartonella tribocorum CIP 105476]
gi|161018128|emb|CAK01686.1| GTP-binding protein HflX [Bartonella tribocorum CIP 105476]
Length = 445
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 178/332 (53%), Gaps = 24/332 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VV+ I+L + + FGKG ++L + D + + L QQ+ L+ L+
Sbjct: 60 VVNYETINLTTPRPATLFGKGKADVLADYI--DKYSIELAIIDHFLTPVQQRNLEKLWNC 117
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
V DR ++++IF A+T+E LQ+ +A L Y + R + T++ +G
Sbjct: 118 KVIDRTALILEIFGDRARTKEGVLQVELAHLSY--QKGRLVRSWTHLERQRGGRGFLGGP 175
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+++ R +L E+ ++++ L + R + R K+++ +P VA+VGYTN GK+TL
Sbjct: 176 GETQIEADRRLLQEKIIRIRRELETVVKTRALHRAKRKKTSYPVVALVGYTNAGKSTLFN 235
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
L+ D L +N LFATLD T + +LP+ IL DT+GFISN+PT L+ F+ TLE+
Sbjct: 236 RLSGADVLA-KNMLFATLDPTLRKVVLPHGKTILLSDTVGFISNLPTNLIAAFRATLEEV 294
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV--------P 406
+ AD+I+HV D+ + D+ Q V E L L+++ EH++ V NK+D V
Sbjct: 295 VEADLILHVRDMLDLDHRTHAQDVLEVLSSLDIDIDDTEHIIEVWNKIDMVDEQALNVLQ 354
Query: 407 PGERVTEEYDLLISATRGTGLAQLKEKVQDMI 438
+ L++SA +G GL QL + ++ I
Sbjct: 355 TSAKTRLNPALIVSALKGDGLDQLLKTIEKRI 386
>gi|345893654|ref|ZP_08844447.1| hypothetical protein HMPREF1022_03107 [Desulfovibrio sp.
6_1_46AFAA]
gi|345045908|gb|EGW49806.1| hypothetical protein HMPREF1022_03107 [Desulfovibrio sp.
6_1_46AFAA]
Length = 549
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 164/317 (51%), Gaps = 24/317 (7%)
Query: 138 DKKSFFGKG---NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIV 194
+ + GKG LE+L Q R + V L Q L D+ + V DR ++
Sbjct: 226 NPRLILGKGKVAELEVLALQGRA-----GMLVFDGELSPAQLHNLADITERKVIDRTQLI 280
Query: 195 IQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVL 246
+ IF HA TR +LQ+ +A+L Y R R + + L++ R
Sbjct: 281 LDIFAQHAVTRAGKLQVELAQLRYTQPRLVGKNRAMDRLMGGIGGRGPGETKLETDRRKS 340
Query: 247 MEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRN 306
ER +++K L++L+ QR R ++ RQ P A+VGYTN GK+TL+ LT D L N
Sbjct: 341 RERMARIRKELDQLRRQRAFTRARRSRQGIPLAALVGYTNAGKSTLLNRLTRSDVLA-EN 399
Query: 307 QLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
+LFATLD TT P I+ DT+GFI N+P L++ F+ TLE+ AD+++HV D
Sbjct: 400 KLFATLDPTTRRLRFPAEREIILADTVGFIRNLPKELMDAFRATLEELEAADLLVHVADA 459
Query: 367 SNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD--AVPPGERVTEEYDLL--ISAT 422
S+PD LQQ V+ L +EL+ + +LV+ NK D A P + + + L +SA
Sbjct: 460 SHPDLLQQISAVETILAEMELDR--VPRLLVL-NKWDQLAAPARAELADAFPLALPVSAK 516
Query: 423 RGTGLAQLKEKVQDMIL 439
G GL L E+++ +L
Sbjct: 517 SGDGLNYLLEQLETDLL 533
>gi|307942253|ref|ZP_07657604.1| GTP-binding protein HflX [Roseibium sp. TrichSKD4]
gi|307774539|gb|EFO33749.1| GTP-binding protein HflX [Roseibium sp. TrichSKD4]
Length = 463
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 214/419 (51%), Gaps = 29/419 (6%)
Query: 100 KMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDA 159
+++ N + + L E+ L ++I ++ S I+ + + + FG+G + L V A
Sbjct: 52 ELRGNRSPEARLEEAVGLSAAIN-LQIAMSGIVKVNNPKPATLFGEGKVSELTGIV---A 107
Query: 160 RVTAVFVSVD-VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY 218
A V +D L QQ+ L+ + V DR ++++IF A+T+E +LQ+ +A L
Sbjct: 108 AQEADLVVIDHPLTPIQQRNLEKHLKTKVIDRTGLILEIFGDRARTKEGKLQVDLAHL-- 165
Query: 219 LWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMM 267
W + R + T++ +G ++S R + +R L+K L +++ R++
Sbjct: 166 TWQKSRLVRSWTHLERQRGGTGFMGGPGETQIESDRRQIQDRITALQKQLEQVRRTRDLH 225
Query: 268 RNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRI 327
R K+++ P VA+VGYTN GK+TL +T+ + ++ LFATLD T + LP+ I
Sbjct: 226 RKKRKKIPQPVVALVGYTNAGKSTLFNRMTESNVFA-KDLLFATLDPTLRKIRLPHGREI 284
Query: 328 LYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLEL 387
+ DT+GFIS++PT L+ F+ TLE+ + AD+I+HV D+S+PD Q + V +TL L +
Sbjct: 285 ILSDTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDISHPDSEAQCEDVKKTLVDLGV 344
Query: 388 EEKILEHVLVVGNKVDAVPPGER------VTEEYDLLISATRGTGLAQLKEKVQDMILKA 441
+ V+ V NK+DA+ P R EE + +SA G G+ L ++ + +
Sbjct: 345 DGSHAAPVIEVWNKIDALDPAYREKLLEDAAEEGPVSLSALTGEGVTSLYGRIDAFMAQH 404
Query: 442 TGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFIS 500
+ + V G L + +S + E + E + +V +TD F+ F +
Sbjct: 405 DDLFTVKLPVFEGA----LLAQLYQLSEVMEREDGEEFITAEVRVTDKQRGPFRDTFAT 459
>gi|304391556|ref|ZP_07373498.1| GTP-binding protein HflX [Ahrensia sp. R2A130]
gi|303295785|gb|EFL90143.1| GTP-binding protein HflX [Ahrensia sp. R2A130]
Length = 455
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 193/387 (49%), Gaps = 33/387 (8%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVD-----STIISLLSFDKKS 141
+ V+ P I K + R +E+ L ++ R +D S + L +
Sbjct: 27 KALVLSPVIASRATSKADKERVHARSEAARLDEAVGLARAIDLEIVHSASVPLSKLKAGT 86
Query: 142 FFGKGNLELLKRQVRGDARVTAVFVSVD-VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
FG G +E LK + A + A V VD L QQ+ L+ +Q V DR ++++IF A
Sbjct: 87 LFGTGKVEELKGLI---AALDAGLVVVDHPLTPVQQRNLEKEWQAKVVDRTGLILEIFGA 143
Query: 201 HAKTREARLQIAIAELPY-------LWT---RYRTIEDATNMNITKGF---LDSKRMVLM 247
A+T+E RLQ+ +A L Y WT R R + + ++S R L
Sbjct: 144 RAQTKEGRLQVELAHLNYQKGRLVRSWTHLERQRGGGGGSGGFLGGPGETQIESDRRQLQ 203
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
+ L+K L K++ R + R++++R P VA+VGYTN GK+TL +LT + ++ ++
Sbjct: 204 GKVNALEKELEKVRRTRTLHRSQRKRIPHPVVALVGYTNAGKSTLFNSLTGAE-VMAKDM 262
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T + LP + + DT+GF+S++PT L+ F+ TLE+ + A++I+HV D+S
Sbjct: 263 LFATLDPTLRQLHLPQGTQAILSDTVGFVSDLPTHLVAAFRATLEEVIEAELILHVRDIS 322
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP-------GERVTEEYDLLIS 420
+ D Q + V L L + E V+ V NK+D + R + LL+S
Sbjct: 323 DSDTKAQAEDVYTILSQLGVGEDGHSRVVEVWNKIDLLDAEALEAIRATRTGNDAPLLVS 382
Query: 421 ATRGTGLAQLKEKVQDMILKATGRKNI 447
A G G L E V+D K G +N+
Sbjct: 383 AVTGEGEGSLLELVED---KLGGSENV 406
>gi|397737266|ref|ZP_10503939.1| GTP-binding proten HflX [Rhodococcus sp. JVH1]
gi|396926996|gb|EJI94232.1| GTP-binding proten HflX [Rhodococcus sp. JVH1]
Length = 484
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 171/324 (52%), Gaps = 25/324 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G E L+ V T + L Q L+ + +V V DR +++ I
Sbjct: 108 DAATYIGSGKAEELREVVLSTGADT--VICDGELTPAQLTALEKVVKVKVIDRTALILDI 165
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HA +RE + Q+A+A++ Y+ R R ++ N G +++
Sbjct: 166 FAQHATSREGKAQVALAQMEYMLPRLRGWGESMSRQAGGRAGSNGGVGLRGPGETKIETD 225
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R + ER KL++ + +K R+ R ++ R + P++A+VGYTN GK++L+ ALT L
Sbjct: 226 RRRIRERMAKLRREIKGMKAARDTKRTRRLRSETPSIAIVGYTNAGKSSLLNALTGSGVL 285
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V +N LFATLD TT L + + DT+GF+ ++PT L+E F+ TLE+ AD+++H
Sbjct: 286 V-QNALFATLDPTTRRAALDDGREYVLTDTVGFVRHLPTQLIEAFRSTLEEVTDADLLLH 344
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELE-EKILEHVLVVGNKVDAVPPGERVTEEYDLL--- 418
VVD S+P Q + V E + + E + L+V NK+DA P +T+ LL
Sbjct: 345 VVDGSDPLPTDQIRAVHEVITEVIRENDAAAPPELIVVNKIDAADP-VTLTQLRSLLPGA 403
Query: 419 --ISATRGTGLAQLKEKVQDMILK 440
+SA G G+A+L+ + D++++
Sbjct: 404 SFVSARTGEGIAELRAHLSDVLIR 427
>gi|377564110|ref|ZP_09793437.1| GTP-binding protein HflX [Gordonia sputi NBRC 100414]
gi|377528743|dbj|GAB38602.1| GTP-binding protein HflX [Gordonia sputi NBRC 100414]
Length = 523
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 187/371 (50%), Gaps = 40/371 (10%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E A ++ G V+++ I S D +F G G + L R V D V + L
Sbjct: 113 EELAALAETAGSVVLEAVIQRRSSPDPATFIGSGKAQEL-RDVVADTGADTVICDGE-LT 170
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA--- 229
Q L+ + +V V DR +++ IF HA +RE + Q+A+A++ Y+ R R ++
Sbjct: 171 PAQLTALEKVVKVKVIDRTALILDIFAQHASSREGKAQVALAQMEYMLPRLRGWGESMSR 230
Query: 230 -----TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
N G +++ R + ER KL++ + +++ R R+ + R P
Sbjct: 231 QAGGRAGSNGGVGLRGPGETKIETDRRRIRERMAKLRREIREMRTARTTKRSARLRGAVP 290
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+AV GYTN GK++L+ A+T LV ++ LFATLD TT L + +++ DT+GF+
Sbjct: 291 RIAVAGYTNAGKSSLVNAMTGSGVLV-QDALFATLDPTTRRATLEDGRELVFTDTVGFVR 349
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV-L 396
++PT L+E F+ TLE+ + AD+++HVVD S+P +Q V + + EE + L
Sbjct: 350 HLPTQLVEAFRSTLEEVVDADLVLHVVDGSDPFPAEQITAVRRVINDVVAEEGVAPPPEL 409
Query: 397 VVGNKVDAVPPGERVTEEYDLL----------------ISATRGTGLAQLKEKVQDMILK 440
+V NK+DA+ R+TE +L +SA G GL +L E V++ +
Sbjct: 410 LVINKIDAI-DASRLTELRGMLGAGGSTHGPNSAGVVYVSARTGEGLPELFEAVREFV-- 466
Query: 441 ATGRKNITMRV 451
GR ++ + V
Sbjct: 467 --GRDDVELTV 475
>gi|374331616|ref|YP_005081800.1| GTP-binding protein HSR1 [Pseudovibrio sp. FO-BEG1]
gi|359344404|gb|AEV37778.1| GTP-binding protein HSR1 [Pseudovibrio sp. FO-BEG1]
Length = 491
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 211/409 (51%), Gaps = 34/409 (8%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAV-FVSVD 169
L E+ L ++I+ +V S ++ L + S FG G +E ++RG + + V VD
Sbjct: 66 LEEAVGLAAAIE-LEIVSSGLVRLANVKPGSLFGSGKVE----EIRGQIEIEEIELVVVD 120
Query: 170 -VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIED 228
L QQ+ L+ + V DR ++++IF A+T+E RLQ+ +A L W + R +
Sbjct: 121 HPLTPIQQRNLERDWNTKVIDRTGLILEIFGERAQTKEGRLQVELAHL--TWQKSRLVRS 178
Query: 229 ATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
T++ +G +++ R ++ +R LK L +++ R++ R ++++ P
Sbjct: 179 WTHLERQRGGLGFVGGPGETQIEADRRIIQDRITLLKGQLEQVQRTRKLHRKQRKKVPHP 238
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+A VGYTN GK+TL +T+ + + ++ LFATLD T LP+ ++ DT+GFIS
Sbjct: 239 VIAFVGYTNAGKSTLFNRMTNAE-VFAKDLLFATLDPTLRRLKLPHGREVILSDTVGFIS 297
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
+P L+ F+ TLE+ + ADI++HV D+++ D Q V+ETL+ L L+ + V+
Sbjct: 298 ELPHNLVAAFRATLEEVIQADIVLHVRDIAHEDTKAQSLDVNETLEMLGLKVSESDRVIE 357
Query: 398 VGNKVDAVPPGER-------VTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMR 450
V NK+D + R +E + +SA G G+ L +++ + A +TM
Sbjct: 358 VYNKIDKLDEAHREKLLESNSVDEGPISVSAISGDGIPDLLARIEARL--AEQLDTVTMV 415
Query: 451 V-RSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
+ S G + WL +H + + DD + + L V + D ++ + F
Sbjct: 416 LPHSDGQGHAWLYQHCEI--LSRDDVE-DGIRLAVRVPDAHRSRVRERF 461
>gi|303328286|ref|ZP_07358724.1| GTP-binding protein HflX [Desulfovibrio sp. 3_1_syn3]
gi|302861616|gb|EFL84552.1| GTP-binding protein HflX [Desulfovibrio sp. 3_1_syn3]
Length = 565
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 164/317 (51%), Gaps = 24/317 (7%)
Query: 138 DKKSFFGKG---NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIV 194
+ + GKG LE+L Q R + V L Q L D+ + V DR ++
Sbjct: 242 NPRLILGKGKVAELEVLALQGRA-----GMLVFDGELSPAQLHNLADITERKVIDRTQLI 296
Query: 195 IQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVL 246
+ IF HA TR +LQ+ +A+L Y R R + + L++ R
Sbjct: 297 LDIFAQHAVTRAGKLQVELAQLRYTQPRLVGKNRAMDRLMGGIGGRGPGETKLETDRRKS 356
Query: 247 MEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRN 306
ER +++K L++L+ QR R ++ RQ P A+VGYTN GK+TL+ LT D L N
Sbjct: 357 RERMARIRKELDQLRRQRAFTRARRSRQGIPLAALVGYTNAGKSTLLNRLTRSDVLA-EN 415
Query: 307 QLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
+LFATLD TT P I+ DT+GFI N+P L++ F+ TLE+ AD+++HV D
Sbjct: 416 KLFATLDPTTRRLRFPAEREIILADTVGFIRNLPKELMDAFRATLEELEAADLLVHVADA 475
Query: 367 SNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD--AVPPGERVTEEYDLL--ISAT 422
S+PD LQQ V+ L +EL+ + +LV+ NK D A P + + + L +SA
Sbjct: 476 SHPDLLQQISAVETILAEMELDR--VPRLLVL-NKWDQLAAPARAELADAFPLALPVSAK 532
Query: 423 RGTGLAQLKEKVQDMIL 439
G GL L E+++ +L
Sbjct: 533 SGDGLNYLLEQLETDLL 549
>gi|171742500|ref|ZP_02918307.1| hypothetical protein BIFDEN_01612 [Bifidobacterium dentium ATCC
27678]
gi|171278114|gb|EDT45775.1| hypothetical protein BIFDEN_01612 [Bifidobacterium dentium ATCC
27678]
Length = 497
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 177/365 (48%), Gaps = 32/365 (8%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQV 155
W + + L E AL + G V D + + D ++ G G EL
Sbjct: 84 WSSRETTQAAAEESLRELAALAET-AGAVVCDGLLQHRIKPDAATYVGSGKARELAGIVA 142
Query: 156 RGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
+ DA V D L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+
Sbjct: 143 QEDADTIVVD---DDLPPSQRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQ 199
Query: 216 LPYLWTRYRTIEDATN------------MNITKGFLDSK----RMVLMEREQKLKKALNK 259
L Y+ R R + + ++G ++K R V+ R KL++ + +
Sbjct: 200 LEYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRSRIAKLRRQIAE 259
Query: 260 LKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEG 319
+ RE+ R ++R PTVAVVGYTN GK++L LT LV N LFATLD
Sbjct: 260 MAPAREVKRGSRRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRA 318
Query: 320 MLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVD 379
+ YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q V+
Sbjct: 319 RAKDGRLYAYVDTVGFVRRLPTQLIEAFKSTLEEVAEADLIVHVVDGSHPDPFSQIDAVN 378
Query: 380 ETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLL------ISATRGTGLAQLKEK 433
+ L ++ I +V NK D + GE V E + L +SA G G+ +L+
Sbjct: 379 DVLADIDGVGAI--PTIVAFNKSDLM--GEAVRERIEALMPDAYVVSAYSGEGVDELRTG 434
Query: 434 VQDMI 438
++ M+
Sbjct: 435 IESML 439
>gi|323692185|ref|ZP_08106428.1| GTP-binding protein HflX [Clostridium symbiosum WAL-14673]
gi|355623742|ref|ZP_09047342.1| GTP-binding protein HflX [Clostridium sp. 7_3_54FAA]
gi|323503759|gb|EGB19578.1| GTP-binding protein HflX [Clostridium symbiosum WAL-14673]
gi|354822245|gb|EHF06612.1| GTP-binding protein HflX [Clostridium sp. 7_3_54FAA]
Length = 418
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 176/316 (55%), Gaps = 20/316 (6%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG +E ++ +V + T V D L Q + L++ V DR M+++ IF +
Sbjct: 60 TYLGKGKIEEVRERV-FELGATGVICD-DELSPAQLRNLENALDTKVMDRTMVILDIFAS 117
Query: 201 HAKTREARLQIAIAELPYLWTRYRTIEDATN--------MNITKGFLDSKRMVLMEREQK 252
HA T E ++Q+ +A+L Y R + ++ + + L+ R ++ +R +
Sbjct: 118 HAVTSEGKIQVELAQLKYRAARLVGLRNSLSRLGGGIGTRGPGEKKLEVDRRLIHDRIGQ 177
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
LK L ++K RE+ R ++ R + A+VGYTN GK+TL+ LT ++ ++LFATL
Sbjct: 178 LKAELLEVKRHREVARKQRDRNYTLSAAIVGYTNAGKSTLLNKLTGA-GILAEDKLFATL 236
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT LP+ +IL DT+GFI +P L+E F+ TLE+A +DII+HVVD +P
Sbjct: 237 DPTTRGMELPSGQKILLTDTVGFIRKLPHHLIEAFRSTLEEARYSDIILHVVDCVSPQMD 296
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG---ERVTEEYDLLISATRGTGLAQ 429
Q V ETL+ LE+++K ++ V NK+D + + + +Y + ISA G GL +
Sbjct: 297 SQIHIVYETLRKLEIKDKT---IVTVFNKIDCLEQEVILKDLQSDYQVKISARTGEGLEE 353
Query: 430 LKEKVQDMILKATGRK 445
L E + + IL+ GRK
Sbjct: 354 LTE-ILETILR--GRK 366
>gi|239625640|ref|ZP_04668671.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519870|gb|EEQ59736.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 424
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 169/316 (53%), Gaps = 24/316 (7%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG ++ + R + + T V D L Q + L+D V DR M+++ IF +
Sbjct: 57 TYLGKGKIDEV-RDLVWELHATGVICD-DELSPAQLRNLEDSLDTKVMDRTMVILDIFAS 114
Query: 201 HAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQK 252
A TRE ++Q+ +A+L Y R R + L++ R ++ +R +
Sbjct: 115 RASTREGKIQVELAQLKYRAVRLVGMRNSLSRLGGGIGTRGPGEKKLETDRRLIHQRISQ 174
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
LK+ L +K RE+ R ++++ T A+VGYTN GK+TL+ LT ++ ++LFATL
Sbjct: 175 LKEELEAVKRHREVTRQQREKDFALTAAIVGYTNAGKSTLLNRLTGA-GILAEDKLFATL 233
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT ++ + +IL DT+GFI +P L+E FK TLE+A +DII+HVVD SNP
Sbjct: 234 DPTTRSFVMEDGQQILLTDTVGFIRKLPHHLIEAFKSTLEEARYSDIILHVVDCSNPQMD 293
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAV----------PPGERVTEEYDLLISAT 422
Q V ETL+ LE+ +K + V NK D + P + +Y + ISA
Sbjct: 294 MQMHVVKETLRELEIVDKT---TVTVFNKTDRLNEEGTEDGMHPVPRDFSSDYQVRISAR 350
Query: 423 RGTGLAQLKEKVQDMI 438
G G+ +L++ ++ +I
Sbjct: 351 TGEGIDELEQILRTII 366
>gi|403071126|ref|ZP_10912458.1| GTP-binding protein [Oceanobacillus sp. Ndiop]
Length = 417
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 173/323 (53%), Gaps = 35/323 (10%)
Query: 142 FFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAH 201
+ GKG LE LK+ V DA V AV D L Q + +++ + V DR M++++IF
Sbjct: 53 YLGKGKLEDLKKMVE-DAEVDAVIFD-DELTPSQIRNIEETIECEVVDRTMLILEIFARR 110
Query: 202 AKTREARLQIAIAELPYLWTRYRTIEDA----------TNMNITKGFLDSKRMVLMEREQ 251
AKTRE++LQ+ +A L Y+ R ++ TN + L++ R + E+
Sbjct: 111 AKTRESKLQVEVARLRYMLPRLIGSRESLGRQGGGSGLTNRGSGETKLETDRRKIEEQIT 170
Query: 252 KLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTD------DDSLVPR 305
KL + L+ L QR R ++++ P V++VGYTN GK+T++ A+ D + + +
Sbjct: 171 KLNRELDNLVNQRRTQRKQREKNNIPVVSLVGYTNAGKSTIMNAVLDAHNSGIEKQVFEK 230
Query: 306 NQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVD 365
+ LFATL+ + + L L DT+GFI+ +P L++ F+ TLE+ + AD+++HV+D
Sbjct: 231 DMLFATLETSVRKVELETNQTFLLTDTVGFINKLPHHLVKAFRSTLEEVLEADLLVHVLD 290
Query: 366 VSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG-------NKVDAVPPGERVTEEYDLL 418
VSNP H +E HL L +ILE + V G NK D +E ++
Sbjct: 291 VSNP-------HHEE---HLNLTNRILEEIGVDGIPVIYAYNKSDLADIAYPDVKENEVY 340
Query: 419 ISATRGTGLAQLKEKVQDMILKA 441
+SA + GL +L E ++ +I K+
Sbjct: 341 LSARKKEGLNELTELIKAVIFKS 363
>gi|269926513|ref|YP_003323136.1| GTP-binding proten HflX [Thermobaculum terrenum ATCC BAA-798]
gi|269790173|gb|ACZ42314.1| GTP-binding proten HflX [Thermobaculum terrenum ATCC BAA-798]
Length = 441
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 175/331 (52%), Gaps = 24/331 (7%)
Query: 125 RVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQ 184
+VV L + D ++F GKG L L +F D L Q++ L+D +
Sbjct: 54 KVVGRITQRLAAPDPRTFIGKGKLRELADMKNATGATVVLFD--DELSPSQERNLEDELK 111
Query: 185 VPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWTRY--RTIEDATNMNIT 235
+ DR +++ IF A+T+E RLQ+ +A+L Y +WT + +
Sbjct: 112 CKIIDRSALILDIFARRARTKEGRLQVELAQLEYRLPRLTRMWTHLSRQGVGGVGLRGPG 171
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ R ER +K+ + +++ R+++R ++ + P V++VGYTN GK+TL+
Sbjct: 172 ETQLEVDRRQSRERITHIKREIEQVRKHRKILREHRKAEGLPVVSLVGYTNAGKSTLLNK 231
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
L D L ++LFATLD TT + LP + L+ DT+GFI +PT L+ F+ TLE+ +
Sbjct: 232 LAGADVLA-EDKLFATLDPTTRQVRLPAGMLSLWTDTVGFIQKLPTDLVAAFRATLEEIL 290
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG------- 408
AD+++HVVD+++ + +Q V+ETL+ L +K +V NKVD + P
Sbjct: 291 EADVLVHVVDITHENAEEQAATVNETLRSLGAADK---PTVVALNKVDKLAPDLDSGLPS 347
Query: 409 -ERVTEEYDLLISATRGTGLAQLKEKVQDMI 438
E + + Y +LISA G G+ L KV+ ++
Sbjct: 348 LEDLPDNY-VLISAELGWGIDTLLSKVEQVL 377
>gi|240139575|ref|YP_002964051.1| GTPase (HflX) [Methylobacterium extorquens AM1]
gi|418059980|ref|ZP_12697911.1| GTP-binding proten HflX [Methylobacterium extorquens DSM 13060]
gi|240009548|gb|ACS40774.1| putative GTPase (HflX) [Methylobacterium extorquens AM1]
gi|373566474|gb|EHP92472.1| GTP-binding proten HflX [Methylobacterium extorquens DSM 13060]
Length = 471
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 224/457 (49%), Gaps = 38/457 (8%)
Query: 77 AQTGALGTDHQVFVVQPFI-KWGKKMKRNTTR-----DFMLAESKALVSSIQGWRVVDST 130
A G + + V+ P++ + +++ T + L E+ L ++I+ V +
Sbjct: 17 APEGEIAAATRTLVLGPYLTRAAQRLAPGQTETVRSDEARLDEAVGLAAAIE-LDVTRAI 75
Query: 131 IISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDR 190
+ + ++ GKG +E + ++ A + V L QQ+ L+ + V DR
Sbjct: 76 SVHIQRPRPSTYLGKGRVEEIAGLIK--AEEIGLVVMDCALSPVQQRNLEKAWGAKVIDR 133
Query: 191 YMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------L 239
++++IF A TRE LQ+ A L Y + R + T++ +G +
Sbjct: 134 TGLILEIFGRRASTREGTLQVEHAHLAY--QKSRLVRSWTHLERQRGGFGFLGGPGETQI 191
Query: 240 DSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDD 299
++ R ++ ER ++++ L + R + R + R +P VA+VGYTN GK+TL ALT
Sbjct: 192 EADRRMIQERMTRIERDLEAVTRTRGLHRKSRARVPYPIVALVGYTNAGKSTLFNALTKA 251
Query: 300 DSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADI 359
+ + ++ LFATLD T LP+ ++ DT+GFIS++PT+L+ F+ TLED + ADI
Sbjct: 252 E-VRAQDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTSLIAAFRATLEDVIEADI 310
Query: 360 IIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERV-------- 411
++HV DVS+ D Q V+ L+ L +E E ++ V NK D + GER
Sbjct: 311 LLHVRDVSHGDTQAQADDVEGVLRELGIEADA-ERIIEVWNKADLLDEGERTRLLNLSAA 369
Query: 412 ---TEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVS 468
+L+SA G GL +L E+++ + +A +T+ G + WL ++ V
Sbjct: 370 HRGAGPAPILVSALTGEGLPELTERIEGQVARARSTFAVTLPPEDGAA-LNWLYENAEVL 428
Query: 469 NIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSRKRG 505
+ R+ +T + L + + +F + F ++++ G
Sbjct: 429 D-RQSETGGA-IALTIRIAPEKEPRFLNRFEAAQRVG 463
>gi|383786050|ref|YP_005470619.1| GTP-binding protein HflX [Fervidobacterium pennivorans DSM 9078]
gi|383108897|gb|AFG34500.1| GTP-binding protein HflX [Fervidobacterium pennivorans DSM 9078]
Length = 423
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 203/397 (51%), Gaps = 21/397 (5%)
Query: 112 AESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVL 171
E L+ G V+D+ I D ++ G G LE +K + R+ V ++
Sbjct: 25 VEELELLCKTLGIEVLDTIIQRREKPDPATYVGSGKLEKIKNFCE-ENRIDVVIFDDEIT 83
Query: 172 KLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRT----IE 227
+ QQ+ ++++ +VP+ DR ++++IF HA T E +LQ+ +A+L Y R R +
Sbjct: 84 PI-QQRNIENILKVPILDRTQVILEIFSRHATTHEGKLQVEMAKLVYELPRLRGKGLYLS 142
Query: 228 DATNMNITKG----FLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVG 283
+ T+G L+ + + +R L+K L KLK RE R + + V++VG
Sbjct: 143 NPGAGIGTRGPGETALELDKRKVKQRISTLRKELAKLKLNRENARKSRLESGYYLVSIVG 202
Query: 284 YTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTL 343
YTN GK+TL+ +++ + ++ ++LF+TL+ T + LP+ L DT+GFIS +P TL
Sbjct: 203 YTNAGKSTLLSSISGEKDIIVSDKLFSTLNPTIRKVKLPSGRSCLVGDTVGFISKLPHTL 262
Query: 344 LEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+E F TLE+ + +D+++ VVD+S+P Y + L+ + EK ++V NK+D
Sbjct: 263 VEAFHSTLEEILYSDLLLLVVDISDPFYKDKISASYSVLEEIGAHEK---PTILVFNKID 319
Query: 404 AVPPG--ERVTEEY--DLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQ 459
+P E + EY + ISA + GL L K++D ++ M +R S+Y
Sbjct: 320 VLPYDKLEIIKYEYPHGVFISAKQRKGLDDLFSKMEDYFKSF----DVRMNLRINHSDYG 375
Query: 460 WLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKH 496
+ K+ I + +S E + + + I+ K +H
Sbjct: 376 LISKYFEYVTIEKLSSSGEFDFVQISGPENIVLKIEH 412
>gi|111023736|ref|YP_706708.1| GTP-binding protein [Rhodococcus jostii RHA1]
gi|110823266|gb|ABG98550.1| GTP-binding protein [Rhodococcus jostii RHA1]
Length = 484
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 171/324 (52%), Gaps = 25/324 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G E L+ V T + L Q L+ + +V V DR +++ I
Sbjct: 108 DAATYIGSGKAEELREVVLSTGADT--VICDGELTPAQLTALEKVVKVKVIDRTALILDI 165
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HA +RE + Q+A+A++ Y+ R R ++ N G +++
Sbjct: 166 FAQHATSREGKAQVALAQMEYMLPRLRGWGESMSRQAGGRAGSNGGVGLRGPGETKIETD 225
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R + ER KL++ + +K R+ R ++ R + P++A+VGYTN GK++L+ ALT L
Sbjct: 226 RRRIRERMAKLRREIKGMKAARDTKRTRRLRSETPSIAIVGYTNAGKSSLLNALTGSGVL 285
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V +N LFATLD TT L + + DT+GF+ ++PT L+E F+ TLE+ AD+++H
Sbjct: 286 V-QNALFATLDPTTRRAALDDGREYVLTDTVGFVRHLPTQLIEAFRSTLEEVTDADLLLH 344
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELE-EKILEHVLVVGNKVDAVPPGERVTEEYDLL--- 418
VVD S+P Q + V E + + E + L+V NK+DA P +T+ LL
Sbjct: 345 VVDGSDPLPTDQIRAVHEVITEVIRENDAAAPPELIVVNKIDAADP-VTLTQLRGLLPGA 403
Query: 419 --ISATRGTGLAQLKEKVQDMILK 440
+SA G G+A+L+ + D++++
Sbjct: 404 SFVSARTGEGIAELRAHLSDVLIR 427
>gi|306822413|ref|ZP_07455791.1| GTP-binding protein HflX [Bifidobacterium dentium ATCC 27679]
gi|309802505|ref|ZP_07696611.1| GTP-binding protein HflX [Bifidobacterium dentium JCVIHMP022]
gi|304553958|gb|EFM41867.1| GTP-binding protein HflX [Bifidobacterium dentium ATCC 27679]
gi|308220905|gb|EFO77211.1| GTP-binding protein HflX [Bifidobacterium dentium JCVIHMP022]
Length = 497
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 175/364 (48%), Gaps = 30/364 (8%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR 156
W + + L E AL + G V D + + D ++ G G L V
Sbjct: 84 WSSRETTQAAAEESLRELAALAET-AGAVVCDGLLQHRIKPDAATYVGSGKARELAGIVS 142
Query: 157 GDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAEL 216
+ T V D L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L
Sbjct: 143 QEDADT--IVVDDDLPPSQRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQL 200
Query: 217 PYLWTRYR------------TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNKL 260
Y+ R R A ++G ++K R V+ R KL++ + ++
Sbjct: 201 EYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRSRIAKLRRQIAEM 260
Query: 261 KGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGM 320
RE+ R ++R PTVAVVGYTN GK++L LT LV N LFATLD
Sbjct: 261 APAREVKRGSRRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRAR 319
Query: 321 LPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDE 380
+ YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q V++
Sbjct: 320 AKDGRLYAYVDTVGFVRRLPTQLIEAFKSTLEEVAEADLIVHVVDGSHPDPFSQIDAVND 379
Query: 381 TLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLL------ISATRGTGLAQLKEKV 434
L ++ I +V NK D + GE V E + L +SA G G+ +L+ +
Sbjct: 380 VLADIDGVGAI--PTIVAFNKSDLM--GEAVRERIEALMPDAYVVSAYSGEGVDELRTGI 435
Query: 435 QDMI 438
+ M+
Sbjct: 436 ESML 439
>gi|42523316|ref|NP_968696.1| GTP-binding protein HflX [Bdellovibrio bacteriovorus HD100]
gi|426403792|ref|YP_007022763.1| GTP-binding protein HflX [Bdellovibrio bacteriovorus str. Tiberius]
gi|39575522|emb|CAE79689.1| GTP-binding protein HflX [Bdellovibrio bacteriovorus HD100]
gi|425860460|gb|AFY01496.1| GTP-binding protein HflX [Bdellovibrio bacteriovorus str. Tiberius]
Length = 421
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 170/325 (52%), Gaps = 19/325 (5%)
Query: 120 SIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD-VLKLHQQKM 178
S G VV S I L ++ + G G +E + VR A V +D L QQ+
Sbjct: 40 SAAGGEVVGSIIQVLPQWNPATLIGTGKVEEVAEMVRDSG---ATIVVMDHQLSGVQQRN 96
Query: 179 LQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAEL---------PYLWTRYRTIEDA 229
LQ + + V DR +++ IF A+T E +LQ+ +A+L +L + R
Sbjct: 97 LQQIVKARVIDRNQLILDIFAQRAQTFEGKLQVELAQLLDQMPRNVGAWLDSLSRQGGGI 156
Query: 230 TNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGK 289
+ L++ R + ER +KK L ++ R R ++R + P+ A+VGYTN GK
Sbjct: 157 GTRGPGETALENDRRRIRERVALIKKKLESVRQNRAQHRQSRRRHEIPSFALVGYTNSGK 216
Query: 290 TTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKV 349
++++ LT + +NQ+FATLD TT + LP+ + DT+GFI +PT L+E FK
Sbjct: 217 SSILNRLTGAQVMT-KNQVFATLDPTTRKIFLPDAPPAVVTDTVGFIRKLPTQLIEAFKA 275
Query: 350 TLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE 409
TLE++ AD+++HVVD+S+P+ +Q + V+ ++ ++K + HV NK D P
Sbjct: 276 TLEESSEADVLLHVVDLSSPNMERQIEVVEALIKEFNWQDKKIIHVF---NKCDVAPLER 332
Query: 410 --RVTEEYDLLISATRGTGLAQLKE 432
RV + +SA G G+ QLK+
Sbjct: 333 QFRVKAYPRVFVSALTGQGMEQLKK 357
>gi|170781619|ref|YP_001709951.1| GTP-binding protein [Clavibacter michiganensis subsp. sepedonicus]
gi|169156187|emb|CAQ01329.1| putative GTP-binding protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 521
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 179/355 (50%), Gaps = 42/355 (11%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D + + D ++FG+G E L+ V A V A V D L
Sbjct: 124 AALAETAGAVVLDGLLQRRPTPDPSTYFGRGKAEELRALV---AAVGADTVIADTELAPS 180
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R D+ +
Sbjct: 181 QRRALEDVVKVKVIDRTAVILDIFSQHAKSREGKAQVELAQLQYLLPRLRGWGDSMSRQA 240
Query: 235 ------------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
TK LD +R + R +L+K + +K R+ R + R
Sbjct: 241 GGQVGGAGAGMGSRGPGETKIELDRRR--INTRMARLRKQIAAMKPARDTKRANRDRHSV 298
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT-----THEGMLPNRLRILYVD 331
P+VA+VGYTN GK++L+ +T LV N LFATLD T T +G L D
Sbjct: 299 PSVAIVGYTNAGKSSLLNRVTKAGVLV-ENALFATLDATVRKTETDQGQL-----YTLAD 352
Query: 332 TIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKI 391
T+GF+ N+P L+E F+ TLE+ +D+++HVVD S+PD Q V E + + I
Sbjct: 353 TVGFVRNLPHQLVEAFRSTLEELADSDVLVHVVDASHPDPGAQLATVHEVIAEVNA-SAI 411
Query: 392 LEHVLVVGNKVDAVPPGERVT----EEYDLLISATRGTGLAQLKEKVQDMILKAT 442
E +VV NK D +RV + +SA G G+ +L+ ++ +++ + T
Sbjct: 412 PE--IVVFNKSDLASADDRVVLRGLAPQGVFVSARTGEGVEELRRRIAELLPQPT 464
>gi|326403953|ref|YP_004284035.1| GTP-binding protein HflX [Acidiphilium multivorum AIU301]
gi|325050815|dbj|BAJ81153.1| GTP-binding protein HflX [Acidiphilium multivorum AIU301]
Length = 435
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 196/394 (49%), Gaps = 25/394 (6%)
Query: 90 VVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLE 149
V+ P+ G+ R + LAE+ L +SI G + I+ + + + FG+G +
Sbjct: 14 VLLPWEHGGRNGPREA--EARLAEAIGLTASI-GLVIAHDEIVQIRAHRPATLFGEGQVR 70
Query: 150 LLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARL 209
+ + +A + V L QQ+ L+ ++ V DR +++ IF A+T E L
Sbjct: 71 RIGESI-AEAEIGVAVVD-STLSPVQQRNLERAWKCKVIDRTGLILDIFGERARTAEGVL 128
Query: 210 QIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALN 258
Q+ +A L Y R R + T++ +G +++ R ++ +R +L++ L+
Sbjct: 129 QVELAHLAY--QRSRLVRSWTHLERQRGGFGFLGGPGETQIEADRRLITDRIARLRRELD 186
Query: 259 KLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHE 318
+++ R + R + R +P VA+VGYTN GK+TL ALT ++ ++QLFATLD T
Sbjct: 187 EVRRTRALHRAARNRVPYPVVALVGYTNAGKSTLFNALTGA-TVHAQDQLFATLDPTMRL 245
Query: 319 GMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHV 378
+LP+ + + DT+GFIS++PT L+ F+ TLE+ ADII+HV D ++PD Q+ V
Sbjct: 246 IVLPSGRQAILSDTVGFISDLPTELVAAFRATLEEVAAADIILHVRDCAHPDSAAQRADV 305
Query: 379 DETLQHLE----LEEKILEHVLVVGNKVDAVPPGER-VTEEYDLLISATRGTGLAQLKEK 433
L + ++E + V NK+D + P R + + +SA G L L+
Sbjct: 306 VSVLDGMARSGMIDEGWSSRCIEVMNKIDLLDPAARDLPGASAIAVSALSGENLDTLRAT 365
Query: 434 VQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
+ D L + + G+ WL +H V
Sbjct: 366 I-DARLAGAMQVATYWLAPADGAGLAWLYRHGEV 398
>gi|283783065|ref|YP_003373819.1| GTP-binding protein HflX [Gardnerella vaginalis 409-05]
gi|283442222|gb|ADB14688.1| GTP-binding protein HflX [Gardnerella vaginalis 409-05]
Length = 512
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 179/360 (49%), Gaps = 26/360 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLH 174
A ++ G V D + D ++ G G EL + DA V D L
Sbjct: 119 AALAQTAGAVVCDGMLQQRYRPDAATYVGSGKARELAAVVAQHDADTIIVD---DDLPPS 175
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--- 231
Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 176 QRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQLQYMLPRLRGWGAALSRQA 235
Query: 232 --------MNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++G ++K R + R KL+ + + R++ R ++RQ PTV
Sbjct: 236 GGRAAGDAGIGSRGPGETKIEMDRRAIRNRISKLRHDIANMAPARDVKRGSRRRQDIPTV 295
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GK+++I LT LV N LFATLD + VDT+GF+ +
Sbjct: 296 AVVGYTNAGKSSIINRLTGSQELV-ENALFATLDTAVRRSQTQDGRSYTLVDTVGFVRRL 354
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E FK TLE+ AD+I+HVVD S+PD + Q V+E L ++ E I + ++
Sbjct: 355 PTQLVEAFKSTLEEVGQADVILHVVDGSHPDPISQINAVNEVLANISGVEDIPQ--IMAL 412
Query: 400 NKVDAVPPG--ERVTEEYD--LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGG 455
NK D + ER + Y +++SA G L L+ ++++++ R ++T+ GG
Sbjct: 413 NKSDMMSDAARERFSSLYSDAVIVSAFSGENLQILRNRLEELLPSPRVRVDVTLPYEFGG 472
>gi|283456413|ref|YP_003360977.1| hflX GTP-binding protein hflX [Bifidobacterium dentium Bd1]
gi|283103047|gb|ADB10153.1| hflX GTP-binding protein hflX [Bifidobacterium dentium Bd1]
Length = 482
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 177/365 (48%), Gaps = 32/365 (8%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQV 155
W + + L E AL + G V D + + D ++ G G EL
Sbjct: 69 WSSRETTQAAAEESLRELAALAET-AGAVVCDGLLQHRIKPDAATYVGSGKARELAGIVA 127
Query: 156 RGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
+ DA V D L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+
Sbjct: 128 QEDADTIVVD---DDLPPSQRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQ 184
Query: 216 LPYLWTRYRTIEDATN------------MNITKGFLDSK----RMVLMEREQKLKKALNK 259
L Y+ R R + + ++G ++K R V+ R KL++ + +
Sbjct: 185 LEYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRSRIAKLRRQIAE 244
Query: 260 LKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEG 319
+ RE+ R ++R PTVAVVGYTN GK++L LT LV N LFATLD
Sbjct: 245 MAPAREVKRGSRRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRA 303
Query: 320 MLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVD 379
+ YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q V+
Sbjct: 304 RAKDGRLYAYVDTVGFVRRLPTQLIEAFKSTLEEVAEADLIVHVVDGSHPDPFSQIDAVN 363
Query: 380 ETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLL------ISATRGTGLAQLKEK 433
+ L ++ I +V NK D + GE V E + L +SA G G+ +L+
Sbjct: 364 DVLADIDGVGAI--PTIVAFNKSDLM--GEAVRERIEALMPDAYVVSAYSGEGVDELRTG 419
Query: 434 VQDMI 438
++ M+
Sbjct: 420 IESML 424
>gi|384100808|ref|ZP_10001865.1| GTP-binding protein [Rhodococcus imtechensis RKJ300]
gi|419965959|ref|ZP_14481894.1| GTP-binding protein [Rhodococcus opacus M213]
gi|424852189|ref|ZP_18276586.1| GTP-binding protein HflX [Rhodococcus opacus PD630]
gi|432349796|ref|ZP_19593230.1| GTP-binding protein [Rhodococcus wratislaviensis IFP 2016]
gi|356666854|gb|EHI46925.1| GTP-binding protein HflX [Rhodococcus opacus PD630]
gi|383841714|gb|EID80991.1| GTP-binding protein [Rhodococcus imtechensis RKJ300]
gi|414568633|gb|EKT79391.1| GTP-binding protein [Rhodococcus opacus M213]
gi|430770849|gb|ELB86770.1| GTP-binding protein [Rhodococcus wratislaviensis IFP 2016]
Length = 484
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 171/324 (52%), Gaps = 25/324 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G E L+ V T + L Q L+ + +V V DR +++ I
Sbjct: 108 DAATYIGSGKAEELREVVLSTGADT--VICDGELTPAQLTALEKVVKVKVIDRTALILDI 165
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HA +RE + Q+A+A++ Y+ R R ++ N G +++
Sbjct: 166 FAQHATSREGKAQVALAQMEYMLPRLRGWGESMSRQAGGRAGSNGGVGLRGPGETKIETD 225
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R + ER KL++ + +K R+ R ++ R + P++A+VGYTN GK++L+ ALT L
Sbjct: 226 RRRIRERMAKLRREIKGMKAARDTKRTRRLRSETPSIAIVGYTNAGKSSLLNALTGSGVL 285
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V +N LFATLD TT L + + DT+GF+ ++PT L+E F+ TLE+ AD+++H
Sbjct: 286 V-QNALFATLDPTTRRAALDDGREYVLTDTVGFVRHLPTQLIEAFRSTLEEVTDADLLLH 344
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELE-EKILEHVLVVGNKVDAVPPGERVTEEYDLL--- 418
VVD S+P Q + V E + + E + L+V NK+DA P +T+ LL
Sbjct: 345 VVDGSDPLPTDQIRAVHEVITEVIRENDAAAPPELIVVNKIDAADP-VTLTQLRGLLPGA 403
Query: 419 --ISATRGTGLAQLKEKVQDMILK 440
+SA G G+A+L+ + D++++
Sbjct: 404 AFVSARTGEGIAELRAHLSDVLVR 427
>gi|126736284|ref|ZP_01752026.1| GTP-binding protein HflX [Roseobacter sp. CCS2]
gi|126714105|gb|EBA10974.1| GTP-binding protein HflX [Roseobacter sp. CCS2]
Length = 412
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 193/377 (51%), Gaps = 26/377 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E +L +++ VV + I+ L FGKG + LK QV DA V V + V
Sbjct: 19 LEEGVSLAAALPDLDVVGADIVRLPRIHPGKLFGKGKIAELK-QVFHDAEVELVLIDGPV 77
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
+ QQ+ L+ + V + DR ++++IF A+T E LQ+ +A L Y R R + T
Sbjct: 78 TPV-QQRNLEKEWGVKLLDRTGLILEIFSDRARTSEGVLQVEMAALSY--QRTRLVRAWT 134
Query: 231 NMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +G +++ R + E+ +L+K L K+ RE+ R + + FP V
Sbjct: 135 HLERQRGGLGFVGGPGETQIEADRRAIDEQLNRLRKQLAKVVKTRELHRASRAKVPFPIV 194
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL LT + ++ LFATLD T + +LP ++ DT+GFIS++
Sbjct: 195 ALVGYTNAGKSTLFNRLTGA-QVFAKDMLFATLDPTMRKIVLPTGDEVIMSDTVGFISDL 253
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+ F+ TLE+ + AD+I+HV D+S+P +Q + V LQ L + E+ ++ V
Sbjct: 254 PTELVAAFRATLEEVLDADLIVHVRDISHPQTEEQAEDVHAILQSLGVAEEA--PIIEVW 311
Query: 400 NKVDAVPPGER------VTEEYDLL-ISATRGTGLAQLKEKVQDMILKATGRKNITMRVR 452
NK D + R DL +SA G G+ L + D + +++++
Sbjct: 312 NKTDLLEGDARDAVLTQAARTDDLFAVSAITGEGMDPLLAAIPDKLKDPRSEEHLSLPF- 370
Query: 453 SGGSEYQWLMKHTAVSN 469
+ G + WL + V++
Sbjct: 371 ADGKKRAWLFEAGVVTD 387
>gi|255506962|ref|ZP_05382601.1| GTP binding protein [Chlamydia trachomatis D(s)2923]
gi|385239894|ref|YP_005807736.1| GTP binding protein [Chlamydia trachomatis G/9768]
gi|385242671|ref|YP_005810510.1| GTP binding protein [Chlamydia trachomatis G/9301]
gi|385246280|ref|YP_005815102.1| GTP binding protein [Chlamydia trachomatis G/11074]
gi|389858071|ref|YP_006360313.1| nucleotide-binding protein [Chlamydia trachomatis F/SW4]
gi|389859823|ref|YP_006362063.1| nucleotide-binding protein [Chlamydia trachomatis F/SW5]
gi|296435899|gb|ADH18073.1| GTP binding protein [Chlamydia trachomatis G/9768]
gi|296437759|gb|ADH19920.1| GTP binding protein [Chlamydia trachomatis G/11074]
gi|297140259|gb|ADH97017.1| GTP binding protein [Chlamydia trachomatis G/9301]
gi|380249143|emb|CCE14435.1| putative nucleotide-binding protein [Chlamydia trachomatis F/SW5]
gi|380250018|emb|CCE13546.1| putative nucleotide-binding protein [Chlamydia trachomatis F/SW4]
gi|440527082|emb|CCP52566.1| GTPase HflX [Chlamydia trachomatis D/SotonD1]
gi|440531546|emb|CCP57056.1| GTPase HflX [Chlamydia trachomatis F/SotonF3]
Length = 447
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 21/281 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ +V V DR ++++IF + A T EA LQ+ +A+ YL R + +
Sbjct: 113 QQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLPRLKRMWGHLSRQK 172
Query: 227 EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
+ KG ++ R ++ ER KL + L ++ QRE R K+R + PT A++
Sbjct: 173 SGGSGGGFVKGEGEKQIELDRRIVRERIHKLSRDLKNVERQREERRKAKKRNQIPTFALI 232
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ LT D+ V N+LFATLD T +LP R+L DT+GFI +P T
Sbjct: 233 GYTNSGKSTLLNLLTSADTYV-ENKLFATLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHT 291
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+ FK TLE A+ DI++HVVD S+P L+ + LQ L + + V+ V NK+
Sbjct: 292 LVAAFKSTLEAALQEDILLHVVDASHPLALEHVETTKAILQELGITQP---QVITVLNKM 348
Query: 403 DAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMI 438
D V G R+ + +SA G G+ +L ++DM+
Sbjct: 349 DKVADGVTASRLRLMSPNPVCVSAKTGEGIRELLRSMEDMV 389
>gi|255325164|ref|ZP_05366270.1| GTP-binding protein HflX [Corynebacterium tuberculostearicum SK141]
gi|255297729|gb|EET77040.1| GTP-binding protein HflX [Corynebacterium tuberculostearicum SK141]
Length = 497
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 208/425 (48%), Gaps = 38/425 (8%)
Query: 43 RDFMLAESKALVKFSDNSQD-DLEESDEFK------TIRDEAQTGALGTDHQVFVVQPFI 95
R F ++ A + + + D DL E + F+ TIR E T +++ ++ I
Sbjct: 15 RAFRFNDAPAAPEATPTTGDLDLAERNAFRRVTRETTIRAEDTTDGYEVEYRKLRLERVI 74
Query: 96 KWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQV 155
G + + A ++ G VV+ D +F G G ++ L+ V
Sbjct: 75 LVGVWTEGTVAEVEATMDELAALTETAGAEVVEMIYQKRDKPDSGTFIGSGKVKELRDIV 134
Query: 156 RGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
+A V L Q L+ V DR M+++ IF HAK++E + Q+++A+
Sbjct: 135 --EATGADTVVCDGELNPGQLTALERALNTKVIDRTMLILDIFAQHAKSKEGKAQVSLAQ 192
Query: 216 LPYLWTRYRTIEDATNMNITKGF-----------------LDSKRMVLMEREQKLKKALN 258
L YL+T R N++ G +++ R + +L+K L
Sbjct: 193 LEYLYTHTRGW--GGNLSRQAGGRAGSNGGVGLRGPGETKIETDRRRIRTEMARLRKQLR 250
Query: 259 KLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHE 318
+K RE+ R+K+QR +A+ GYTN GK++LI A+T LV + LFATLD TT
Sbjct: 251 AMKTAREVKRSKRQRSTIAQIAIAGYTNAGKSSLINAMTGAGVLV-EDALFATLDPTTRR 309
Query: 319 GMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHV 378
L + ++++ DT+GF+ ++PT L+E FK TLE+ + ADI++HVVD S+P L+Q + V
Sbjct: 310 ATLADGRQVVFTDTVGFVRHLPTQLVEAFKSTLEEVLAADIMLHVVDGSDPFPLKQIEAV 369
Query: 379 DETLQHL--ELEEKILEHVLVVGNKVDAVPP-----GERVTEEYDLL-ISATRGTGLAQL 430
++ + + E E+ ++V+ NK+D P V + D++ +SA G G+ +L
Sbjct: 370 NQVIYDIVSETGEQAPPEIIVI-NKIDQADPLVLAELRHVLDHEDVVYVSARTGEGIDEL 428
Query: 431 KEKVQ 435
+V+
Sbjct: 429 TARVE 433
>gi|148260756|ref|YP_001234883.1| HSR1-like GTP-binding protein [Acidiphilium cryptum JF-5]
gi|338986380|ref|ZP_08633437.1| HSR1-like GTP-binding protein [Acidiphilium sp. PM]
gi|146402437|gb|ABQ30964.1| GTP-binding protein HflX [Acidiphilium cryptum JF-5]
gi|338206695|gb|EGO94774.1| HSR1-like GTP-binding protein [Acidiphilium sp. PM]
Length = 435
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 196/394 (49%), Gaps = 25/394 (6%)
Query: 90 VVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLE 149
V+ P+ G+ R + LAE+ L +SI G + I+ + + + FG+G +
Sbjct: 14 VLLPWEHGGRNGPREA--EARLAEAIGLTASI-GLVIAHDEIVQIRAHRPATLFGEGQVR 70
Query: 150 LLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARL 209
+ + +A + V L QQ+ L+ ++ V DR +++ IF A+T E L
Sbjct: 71 RIGESI-AEAEIGVAVVD-STLSPVQQRNLERAWKCKVIDRTGLILDIFGERARTAEGVL 128
Query: 210 QIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALN 258
Q+ +A L Y R R + T++ +G +++ R ++ +R +L++ L+
Sbjct: 129 QVELAHLAY--QRSRLVRSWTHLERQRGGFGFLGGPGETQIEADRRLITDRIARLRRELD 186
Query: 259 KLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHE 318
+++ R + R + R +P VA+VGYTN GK+TL ALT ++ ++QLFATLD T
Sbjct: 187 EVRRTRALHRAARNRVPYPVVALVGYTNAGKSTLFNALTGA-TVHAQDQLFATLDPTMRL 245
Query: 319 GMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHV 378
+LP+ + + DT+GFIS++PT L+ F+ TLE+ ADII+HV D ++PD Q+ V
Sbjct: 246 IVLPSGRQAILSDTVGFISDLPTELVAAFRATLEEVAAADIILHVRDCAHPDSAAQRADV 305
Query: 379 DETLQHLE----LEEKILEHVLVVGNKVDAVPPGER-VTEEYDLLISATRGTGLAQLKEK 433
L + ++E + V NK+D + P R + + +SA G L L+
Sbjct: 306 VSVLDGMARSGMIDEGWSSRCIEVMNKIDLLDPAARDLPGASAIAVSALSGENLDTLRAT 365
Query: 434 VQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
+ D L + + G+ WL +H V
Sbjct: 366 I-DARLAGAMQVATYWLAPADGAGLAWLYRHGEV 398
>gi|226366173|ref|YP_002783956.1| GTP-binding protein HflX [Rhodococcus opacus B4]
gi|226244663|dbj|BAH55011.1| putative GTP-binding protein HflX [Rhodococcus opacus B4]
Length = 484
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 171/324 (52%), Gaps = 25/324 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G E L+ V T + L Q L+ + +V V DR +++ I
Sbjct: 108 DAATYIGSGKAEELREVVLSTGADT--VICDGELTPAQLTALEKVVKVKVIDRTALILDI 165
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HA +RE + Q+A+A++ Y+ R R ++ N G +++
Sbjct: 166 FAQHATSREGKAQVALAQMEYMLPRLRGWGESMSRQAGGRAGSNGGVGLRGPGETKIETD 225
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R + ER KL++ + +K R+ R ++ R + P++A+VGYTN GK++L+ ALT L
Sbjct: 226 RRRIRERMAKLRREIKGMKAARDTKRTRRLRSETPSIAIVGYTNAGKSSLLNALTGSGVL 285
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V +N LFATLD TT L + + DT+GF+ ++PT L+E F+ TLE+ AD+++H
Sbjct: 286 V-QNALFATLDPTTRRAALDDGREYVLTDTVGFVRHLPTQLIEAFRSTLEEVTDADLLLH 344
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELE-EKILEHVLVVGNKVDAVPPGERVTEEYDLL--- 418
VVD S+P Q + V E + + E + L+V NK+DA P +T+ LL
Sbjct: 345 VVDGSDPLPTDQIKAVHEVITEVIRENDAAAPPELIVVNKIDAADP-VTLTQLRGLLPGA 403
Query: 419 --ISATRGTGLAQLKEKVQDMILK 440
+SA G G+A+L+ + D++++
Sbjct: 404 SFVSARTGEGVAELRAHLSDVLVR 427
>gi|330999637|ref|ZP_08323346.1| GTP-binding protein HflX [Parasutterella excrementihominis YIT
11859]
gi|329574143|gb|EGG55719.1| GTP-binding protein HflX [Parasutterella excrementihominis YIT
11859]
Length = 387
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 181/355 (50%), Gaps = 28/355 (7%)
Query: 103 RNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVT 162
R RD L S+ S G++V T D K+F G G +E +K + +
Sbjct: 24 REIHRDAALELSELATSC--GFQVAGLTEAKRDRPDPKTFLGSGKIEEIKSEALANGAKA 81
Query: 163 AVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWT 221
+F DV L QQ+ ++ + V DR ++++IF+ AKTRE RLQ+ +A L +L T
Sbjct: 82 LIF---DVALSPAQQRNIEKAVGIEVLDRTNLILEIFRQRAKTREGRLQVELARLTHLST 138
Query: 222 RYRTIEDATNMNITKGFLDSK-----------RMVLMEREQKLKKALNKLKGQREMMRNK 270
R + T++ +G L R ++ R + L++ L KL+ QR R
Sbjct: 139 RL--VRGWTHLERQRGGLSKTGGPGEKQIELDRRMIATRVKALREQLKKLERQRNTQRKS 196
Query: 271 KQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYV 330
+QR + TVA+VGYTN GK+TL LT + +QLFATLD T + + ++
Sbjct: 197 RQRGEVLTVALVGYTNAGKSTLFNRLTRG-GVYAADQLFATLDTTARRCFVGGDVEVVLS 255
Query: 331 DTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEK 390
DT+GFI +P L+E FK TL++A AD+++HVVD S P +Q V++ L+ E+ K
Sbjct: 256 DTVGFIRGLPHQLIEAFKSTLDEAAQADLLLHVVDSSTPAREEQMTEVNKVLE--EIGAK 313
Query: 391 ILEHVLVVGNKVDAVPPGERVTEEYD-----LLISATRGTGLAQLKEKVQDMILK 440
+ +LV NK+D +T D + ISA G G+ LK+ ++ + K
Sbjct: 314 DIPQLLVF-NKIDLEGRSPFITCAEDGTPKAVGISAANGEGIDLLKDAIRQIAEK 367
>gi|90419640|ref|ZP_01227550.1| GTP-binding protein HflX [Aurantimonas manganoxydans SI85-9A1]
gi|90336577|gb|EAS50318.1| GTP-binding protein HflX [Aurantimonas manganoxydans SI85-9A1]
Length = 406
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 171/299 (57%), Gaps = 17/299 (5%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
L ++I G +V S ++S + G G +E +K + G+ VF L Q
Sbjct: 2 GLAAAI-GLDIVASGVVSGQRPRPATLIGTGKVEEMKGVIAGEEIGLVVFDHP--LTPVQ 58
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNIT 235
Q+ L+ V V DR ++++IF A+T+E RLQ+ +A L Y R R + T++
Sbjct: 59 QRNLERELNVKVLDRTGLILEIFGERARTKEGRLQVELAHLNY--QRGRLVRSWTHLERQ 116
Query: 236 KGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGY 284
+G ++S R L E+ ++L+K L +++ R++ R ++++ P VA+VGY
Sbjct: 117 RGGAGFLGGPGETQIESDRRQLQEKIKRLEKDLEQVRRTRQLHRAQRKKAPHPVVALVGY 176
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
TN GK+TL LT + ++ ++ LFATLD T LP+ IL+ DT+GF+S++PT L+
Sbjct: 177 TNAGKSTLFNRLTGAE-VMAKDLLFATLDPTLRRTTLPHGTEILFSDTVGFVSDLPTHLV 235
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
F+ TLE+ + ADI++HV DV++PD L Q + V + L+ L+++ +HV+ + NKVD
Sbjct: 236 AAFRATLEEVIEADIVLHVRDVADPDTLAQAEDVRKILRDLDIDVDDSDHVVEIWNKVD 294
>gi|303257596|ref|ZP_07343608.1| GTP-binding protein HflX [Burkholderiales bacterium 1_1_47]
gi|302859566|gb|EFL82645.1| GTP-binding protein HflX [Burkholderiales bacterium 1_1_47]
Length = 373
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 181/355 (50%), Gaps = 28/355 (7%)
Query: 103 RNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVT 162
R RD L S+ S G++V T D K+F G G +E +K + +
Sbjct: 10 REIHRDAALELSELATSC--GFQVAGLTEAKRDRPDPKTFLGSGKIEEIKSEALANGAKA 67
Query: 163 AVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWT 221
+F DV L QQ+ ++ + V DR ++++IF+ AKTRE RLQ+ +A L +L T
Sbjct: 68 LIF---DVALSPAQQRNIEKAVGIEVLDRTNLILEIFRQRAKTREGRLQVELARLTHLST 124
Query: 222 RYRTIEDATNMNITKGFLDSK-----------RMVLMEREQKLKKALNKLKGQREMMRNK 270
R + T++ +G L R ++ R + L++ L KL+ QR R
Sbjct: 125 RL--VRGWTHLERQRGGLSKTGGPGEKQIELDRRMIATRVKALREQLKKLERQRNTQRKS 182
Query: 271 KQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYV 330
+QR + TVA+VGYTN GK+TL LT + +QLFATLD T + + ++
Sbjct: 183 RQRGEVLTVALVGYTNAGKSTLFNRLTRG-GVYAADQLFATLDTTARRCFVGGDVEVVLS 241
Query: 331 DTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEK 390
DT+GFI +P L+E FK TL++A AD+++HVVD S P +Q V++ L+ E+ K
Sbjct: 242 DTVGFIRGLPHQLIEAFKSTLDEAAQADLLLHVVDSSTPAREEQMTEVNKVLE--EIGAK 299
Query: 391 ILEHVLVVGNKVDAVPPGERVTEEYD-----LLISATRGTGLAQLKEKVQDMILK 440
+ +LV NK+D +T D + ISA G G+ LK+ ++ + K
Sbjct: 300 DIPQLLVF-NKIDLEGRSPFITCAEDGTPKAVGISAANGEGIDLLKDAIRQIAEK 353
>gi|347602489|sp|Q04PB3.2|HFLX_LEPBJ RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
Length = 462
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 161/290 (55%), Gaps = 22/290 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VVD+ I D + GKG LE + ++ + + V L Q K + D+ +
Sbjct: 98 VVDTFIQRKNRLDPSTVLGKGKLEEI--ILKAIQKHVELLVFDLELTPSQAKKISDIADI 155
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN----------IT 235
V DR +++ IF +AK+R+ +LQ+ +A+L YL R ++D NM+
Sbjct: 156 KVIDRTQLILDIFARNAKSRDGKLQVELAQLKYLKGRLTELDD--NMSRLTGGIGGRGPG 213
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ + + ER +L+ L LK +RE+ R +++R + P V +VGYTN GK+T + A
Sbjct: 214 ETKLEIGKRRVEERITRLEVELKSLKKRREINRRQRKRNELPAVGIVGYTNAGKSTFLNA 273
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT+ + ++ N+LFATLD TT P I+ DT+GFI ++P L FK TLE+
Sbjct: 274 LTNSE-ILSENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPELSNAFKATLEELG 332
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV--LVVGNKVD 403
+D+++HVVDVSNPDY Q + V++ L+ LE L H+ + V NK+D
Sbjct: 333 DSDLLVHVVDVSNPDYKLQMEAVEKILEELE-----LSHIPMIQVFNKID 377
>gi|192291246|ref|YP_001991851.1| GTP-binding proten HflX [Rhodopseudomonas palustris TIE-1]
gi|192284995|gb|ACF01376.1| GTP-binding proten HflX [Rhodopseudomonas palustris TIE-1]
Length = 455
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 207/416 (49%), Gaps = 44/416 (10%)
Query: 83 GTDHQVFVVQPF--IKWGKKMKRNTT---RDFMLAESKALVSSIQGWRVVDSTIISLLSF 137
G +V VV P+ ++ G +T D L E+ L +I VV++ + +
Sbjct: 18 GETGRVIVVGPYLRVRRGDPDAVDTAVRDNDARLDEAAGLARAID-LDVVEAVLTPISQI 76
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQ 196
++ GKG +E + + A A + +D L QQ+ L+ + V DR ++++
Sbjct: 77 RPATYLGKGKVEEIVGLI---AAHGADLIVMDCALSPIQQRNLEKAWNAKVLDRTGLILE 133
Query: 197 IFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMV 245
IF AKTRE LQ+ +A L Y R R + T++ +G +++ R +
Sbjct: 134 IFGRRAKTREGTLQVELAHLNY--QRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRL 191
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR 305
+ ER KL+ L K++ R + R +QR + VA+VGYTN GK+TL LT D +
Sbjct: 192 IGERITKLEAELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRAD-VQAA 250
Query: 306 NQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVD 365
+ LFATLD T LP+ + + DT+GFISN+PT L+ F+ TLE+ + AD+I+HV D
Sbjct: 251 DMLFATLDPTLRAIQLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEADLILHVRD 310
Query: 366 VSNPDYLQQKQHVDETLQHLELEE---KILEHVLVVGNKVDAVPP----------GERVT 412
+S+ D Q+ VD L+ L ++ +I+E V NK+D P R
Sbjct: 311 ISHEDAEAQQHDVDNVLRQLGVDAASGRIVE----VWNKIDRFEPEQRDELKNIAARRPE 366
Query: 413 EEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG-GSEYQWLMKHTAV 467
+ LL+SA G G+ +L ++ + A R + + + + G+ WL ++T V
Sbjct: 367 DHPCLLVSAVSGEGVDELLLSIEQRL--AATRTVLDLSIDAADGAGVSWLHRNTEV 420
>gi|167761626|ref|ZP_02433753.1| hypothetical protein CLOSCI_04038 [Clostridium scindens ATCC 35704]
gi|336422001|ref|ZP_08602155.1| GTP-binding protein HflX [Lachnospiraceae bacterium 5_1_57FAA]
gi|167660769|gb|EDS04899.1| GTP-binding protein HflX [Clostridium scindens ATCC 35704]
gi|336009291|gb|EGN39285.1| GTP-binding protein HflX [Lachnospiraceae bacterium 5_1_57FAA]
Length = 426
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 155/294 (52%), Gaps = 14/294 (4%)
Query: 118 VSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQK 177
++S G V I + ++ GKG +E +K + + T + D L Q K
Sbjct: 37 LASTAGAATVGVVIQNREQVHPGTYVGKGKIEEIK-GLMWELEATGIICD-DELSPAQMK 94
Query: 178 MLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDA 229
LQD V DR ++++ IF + A T E ++Q+ +A+L Y +R R
Sbjct: 95 NLQDELDAKVMDRTLVILDIFASRASTSEGKIQVELAQLKYRQSRLTGFGTALSRLGGGI 154
Query: 230 TNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGK 289
+ L+ R ++ R +L + L +K RE+ R ++ R + P A+VGYTN GK
Sbjct: 155 GTRGPGEKKLEMDRRLIKGRIAQLNRELRDVKRHREVTREQRSRNRIPVAAIVGYTNAGK 214
Query: 290 TTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKV 349
+TL+ LT ++ ++LFATLD TT E LP+ IL DT+GFI +P L+E F+
Sbjct: 215 STLLNTLTGA-GILAEDKLFATLDPTTRELKLPSGQEILLTDTVGFIRKLPHHLIEAFRS 273
Query: 350 TLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
TLE+A ADII+HVVD +NP +Q V ETLQ+L + +K ++ + NK D
Sbjct: 274 TLEEARYADIILHVVDAANPQMDEQMYIVYETLQNLGVTDK---PIVTIFNKQD 324
>gi|116327044|ref|YP_796764.1| GTPase [Leptospira borgpetersenii serovar Hardjo-bovis str. L550]
gi|116332297|ref|YP_802015.1| GTPase [Leptospira borgpetersenii serovar Hardjo-bovis str. JB197]
gi|116119788|gb|ABJ77831.1| GTPase [Leptospira borgpetersenii serovar Hardjo-bovis str. L550]
gi|116125986|gb|ABJ77257.1| GTPase [Leptospira borgpetersenii serovar Hardjo-bovis str. JB197]
Length = 521
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 161/290 (55%), Gaps = 22/290 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VVD+ I D + GKG LE + ++ + + V L Q K + D+ +
Sbjct: 157 VVDTFIQRKNRLDPSTVLGKGKLEEI--ILKAIQKHVELLVFDLELTPSQAKKISDIADI 214
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN----------IT 235
V DR +++ IF +AK+R+ +LQ+ +A+L YL R ++D NM+
Sbjct: 215 KVIDRTQLILDIFARNAKSRDGKLQVELAQLKYLKGRLTELDD--NMSRLTGGIGGRGPG 272
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ + + ER +L+ L LK +RE+ R +++R + P V +VGYTN GK+T + A
Sbjct: 273 ETKLEIGKRRVEERITRLEVELKSLKKRREINRRQRKRNELPAVGIVGYTNAGKSTFLNA 332
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT+ + ++ N+LFATLD TT P I+ DT+GFI ++P L FK TLE+
Sbjct: 333 LTNSE-ILSENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPELSNAFKATLEELG 391
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV--LVVGNKVD 403
+D+++HVVDVSNPDY Q + V++ L+ LE L H+ + V NK+D
Sbjct: 392 DSDLLVHVVDVSNPDYKLQMEAVEKILEELE-----LSHIPMIQVFNKID 436
>gi|23011756|ref|ZP_00052024.1| COG2262: GTPases [Magnetospirillum magnetotacticum MS-1]
Length = 376
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 184/353 (52%), Gaps = 29/353 (8%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
QQ+ L+ + V DR ++++IF A TRE LQ+ A L Y R R + T++
Sbjct: 23 QQRNLEKAWGAKVIDRTGLILEIFGRRASTREGTLQVEHAHLAY--QRSRLVRSWTHLER 80
Query: 235 TKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVG 283
+G +++ R ++ ER ++++ L+ + R + R + R +P VA+VG
Sbjct: 81 QRGGFGFLGGPGETQIEADRRMIQERMTRIERDLDAVTRTRGLHRKSRARVPYPIVALVG 140
Query: 284 YTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTL 343
YTN GK+TL ALT + + ++ LFATLD T LP+ ++ DT+GFIS++PT+L
Sbjct: 141 YTNAGKSTLFNALTKAE-VKAQDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTSL 199
Query: 344 LEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+ F+ TLED + ADI++HV DVS+ D Q + V+ L+ L ++ + ++ V NK D
Sbjct: 200 IAAFRATLEDVIEADILLHVRDVSHGDTQAQAEDVEAVLRELGIKADA-DRIIEVWNKAD 258
Query: 404 AVPPGERV-----------TEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVR 452
+ GER T +L+SA G GL L E+++ + +A +++
Sbjct: 259 LLDEGERTRLLNLSAAHRGTGPAPILVSALTGEGLPALAERIESQVARARSTFAVSLPPE 318
Query: 453 SGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSRKRG 505
G + WL ++ V + + D S + L + + +F + F ++R+ G
Sbjct: 319 DGAA-LNWLYENAEVLDRQAD--SGGVIALTIRIAPEKEPRFLNRFEAARRIG 368
>gi|386811240|ref|ZP_10098466.1| GTP-binding protein [planctomycete KSU-1]
gi|386405964|dbj|GAB61347.1| GTP-binding protein [planctomycete KSU-1]
Length = 436
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 180/330 (54%), Gaps = 29/330 (8%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGN-LELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQD 181
G RVV + I + +S D + GKG LEL DA V + D L Q + L+
Sbjct: 42 GARVVYTAIQNRISIDPVYYLGKGKALELADAAKELDA---DVLICDDDLTPAQVRNLEK 98
Query: 182 LFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWTRYRTIEDATNMNI 234
+ V DR +++ IF AKT +A+LQ+ +A+L Y +WT IE
Sbjct: 99 VIGKKVIDRSELILDIFATRAKTFQAKLQVELAQLEYTKPRLKRMWTHLSRIEGGIG--- 155
Query: 235 TKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKT 290
T+G L+ + ++ + Q LKK L +++ ++E R R++F T+++VGYTN GK+
Sbjct: 156 TRGPGEKQLEVDKRIISRKIQYLKKKLYEVEKRQE--RLVSSRKEFFTISIVGYTNAGKS 213
Query: 291 TLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVT 350
TL+ ALTD D+LV ++LFATLD T L N +IL DT+GFI +P L+ FK T
Sbjct: 214 TLMNALTDVDTLV-EDKLFATLDTKTGMCRLENGKKILISDTVGFIQKLPHHLISSFKAT 272
Query: 351 LEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD-----AV 405
LE+A AD+++HVVD+S+P +Q V+ L+ L + K V++V NKVD ++
Sbjct: 273 LEEARHADLLLHVVDISSPVVQEQIDAVNAVLKELGCDNK---PVIMVFNKVDTITNESI 329
Query: 406 PPGERVTEEYDLLISATRGTGLAQLKEKVQ 435
P R ++ISA G+ LK +++
Sbjct: 330 VPLLRNRYGDCVMISAKTQRGIEDLKRRIE 359
>gi|373457055|ref|ZP_09548822.1| GTP-binding proten HflX [Caldithrix abyssi DSM 13497]
gi|371718719|gb|EHO40490.1| GTP-binding proten HflX [Caldithrix abyssi DSM 13497]
Length = 424
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 190/361 (52%), Gaps = 22/361 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L+E AL + G ++D+ I S D F GKG +E + V + +F D
Sbjct: 33 LSELAALART-SGADIIDTFIQERPSPDPAYFIGKGKIEEIAEYVSFNDIDLLIFD--DE 89
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTR----YRTI 226
L Q + +++L + V DR +++ IF HA+T A++Q+ +A+L Y R ++ +
Sbjct: 90 LSPAQVRNIENLTGIKVIDRTALILDIFALHARTNMAKVQVELAQLNYYLPRLTRQWQHL 149
Query: 227 EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
TKG L++ R ++ +R LK+ L K+ Q E+ R +QRQ+ A++
Sbjct: 150 SRQVGGIGTKGPGETQLETDRRLVRQRISHLKEKLEKIAHQNEVQR--QQRQELFRAALI 207
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ ALT+ L+ +QLFATLD T L IL DT+GFI +P
Sbjct: 208 GYTNAGKSTLMNALTNARVLI-EDQLFATLDTTVRRLALNPTTTILLSDTVGFIRKLPHH 266
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+ F+ TL +A+ AD++IHVVDV++P + Q + V++ L L L EK L+V NKV
Sbjct: 267 LVASFQTTLAEAIEADLLIHVVDVTHPHFEAQVKTVNQILDELHLNEK---KRLLVFNKV 323
Query: 403 DAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSE 457
D + R+ L ISA R GL L+ ++ ++ + + I + + G +E
Sbjct: 324 DRLKNHHLIDQLRLLHPEALFISAARHIGLQHLRNRLLNLAEERYEIEQIRLNYQRGAAE 383
Query: 458 Y 458
+
Sbjct: 384 H 384
>gi|326390100|ref|ZP_08211661.1| GTP-binding proten HflX [Thermoanaerobacter ethanolicus JW 200]
gi|325993748|gb|EGD52179.1| GTP-binding proten HflX [Thermoanaerobacter ethanolicus JW 200]
Length = 413
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 179/343 (52%), Gaps = 22/343 (6%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
+ DK + GKG LE LK + V V V+ D L Q K ++D V V DR +++
Sbjct: 52 TIDKAHYIGKGKLEELKFFAE-NQEVDLVIVN-DELTGTQIKNMEDFLNVKVIDRTNLIL 109
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLM 247
IF AK++E LQ+ +A+L Y R R + L++ R +
Sbjct: 110 DIFAKRAKSKEGMLQVELAQLKYRLPRLAGLGGQLSRLGGGIGTRGPGETKLETDRRHIK 169
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
R + ++K L +++ R + R ++++ + P +A+VGYTN GK+TL+ ALT+ + V N+
Sbjct: 170 NRIKAIEKKLEEIERHRSLQRERRKKNRIPVIAIVGYTNAGKSTLLNALTNAEVYV-ENK 228
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T +LP+ ++ +DT+GFI +P L+E FK TLE+ AD+++HV+DV+
Sbjct: 229 LFATLDPTARRLVLPSGREVILIDTVGFIRKLPHDLVEAFKSTLEEVKYADLLLHVIDVT 288
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD---AVPPGERVTEEYDLLISATRG 424
+PD ++ + V++ L L I + V NK+D VP G E ++ ISA
Sbjct: 289 SPDMEEKIKVVEKVLSDL---GAINTPKINVFNKIDLLEVVPKG----NEREVYISAKNK 341
Query: 425 TGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
G +L + ++ I K N + EY +L + T +
Sbjct: 342 IGFDKLLQAIEREIFKDVEVVNFLLPY-DKTKEYNYLKEKTKI 383
>gi|149178557|ref|ZP_01857144.1| GTP-binding protein Hflx [Planctomyces maris DSM 8797]
gi|148842575|gb|EDL56951.1| GTP-binding protein Hflx [Planctomyces maris DSM 8797]
Length = 450
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 191/348 (54%), Gaps = 27/348 (7%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E K LV + G +VV + + + + + GKG LE LK+ V+ V A + D
Sbjct: 34 LDELKGLVDT-AGVKVVGTLVQNRENPHPATCLGKGKLEELKQMVK---HVDAELIIFDN 89
Query: 171 -LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWTR 222
L Q + +++ + DR +++ IF HAKT EA+LQ+ +A+L Y LWT
Sbjct: 90 NLSPSQGRNIEEETGTVIVDRSELILDIFATHAKTYEAKLQVELAQLLYFRPRLKRLWTH 149
Query: 223 YRTIEDATNMNIT--KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
IE + L++ R +L +R +LK+ L++++ +RE R R + TV+
Sbjct: 150 LERIEGGVGAGRGPGEKQLETDRRLLDKRVAELKRKLSEVERRRE--RTVSNRFQQLTVS 207
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+VGYTN GK+TL+ ALT D + +QLFATLD T LP+ IL DT+GF+ ++P
Sbjct: 208 LVGYTNAGKSTLMNALTGADVYIA-DQLFATLDTRTRRWELPHWGEILLSDTVGFVRDLP 266
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
L+ FK TLE+A AD+++HVVD SNP+ + V++ L +E+E K + ++V N
Sbjct: 267 HHLVASFKSTLEEARQADLLLHVVDCSNPEVEHHIKTVNKVLDEIEIEHK---NAILVFN 323
Query: 401 KVDAVPPGERVTE---EYD--LLISATRGTGLAQLKEKVQDMILKATG 443
K D V ++ +YD + +SA G GL +L + V D + A+G
Sbjct: 324 KTDKVEDRSKLDVLRLKYDNAISVSAVSGEGLDRLSQAVIDRL--ASG 369
>gi|377568277|ref|ZP_09797471.1| GTP-binding protein HflX [Gordonia terrae NBRC 100016]
gi|377534525|dbj|GAB42636.1| GTP-binding protein HflX [Gordonia terrae NBRC 100016]
Length = 490
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 185/358 (51%), Gaps = 30/358 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G +++D+ I D ++ G G E L+ V T V L Q
Sbjct: 93 AALAETAGSQILDAVIQRRSKPDPATYIGSGKAEELREIVLATGADT--VVCDGELTPAQ 150
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA------ 229
L+ + +V V DR +++ IF HA +RE + Q+++A++ Y+ R R ++
Sbjct: 151 LNALEKVVKVKVIDRTALILDIFAQHATSREGKAQVSLAQMEYMLPRLRGWGESMSRQAG 210
Query: 230 --TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
N G +++ R + ER KL++ + +K R R ++ PT+
Sbjct: 211 GRAGSNGGVGLRGPGETKIETDRRRIRERMAKLRREIRGMKKARTTKRAARKSGSIPTIT 270
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
V GYTN GK++L+ A+T LV ++ LFATLD TT L + +++ DT+GF+ ++P
Sbjct: 271 VAGYTNAGKSSLVNAMTGAGVLV-QDALFATLDPTTRRATLDDGRAVVFTDTVGFVRHLP 329
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV-LVVG 399
T L+E F+ TLE+ + AD+++HVVD ++ ++Q V + + + EE + L+V
Sbjct: 330 TQLVEAFRSTLEEVVDADLLLHVVDGADAFPMEQISAVRQVINDIVAEEGVTAPPELLVI 389
Query: 400 NKVDAVPPGERVTEEYDLL------ISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
NK+DA+ G R+TE L ISA G GL +L +V++ + GR+++ M +
Sbjct: 390 NKIDAI-DGNRLTELRGALGADAVFISARTGEGLPELFGRVREFV----GREDVEMTI 442
>gi|302339575|ref|YP_003804781.1| GTP-binding proten HflX [Spirochaeta smaragdinae DSM 11293]
gi|301636760|gb|ADK82187.1| GTP-binding proten HflX [Spirochaeta smaragdinae DSM 11293]
Length = 429
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 192/377 (50%), Gaps = 27/377 (7%)
Query: 81 ALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKK 140
+L + + F+V+ ++ ++ +R+ + LAE K LV ++ G + +T+ L S
Sbjct: 12 SLPRERRAFLVE--LRRAEESERSC--EAHLAELKGLVGTL-GLTIAGTTVAPLRSPSPA 66
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
G G E + D V + D L QQ+ + L V DR ++++IF
Sbjct: 67 LLLGSGKSEEIADS--ADELDAGVIIIDDDLTPRQQRNWERLSGCVVIDRQEVILEIFAD 124
Query: 201 HAKTREARLQIAIAELPY-------LWTRYRTIEDATNMNITKGF--LDSKRMVLMEREQ 251
A TREA LQ+A+A + Y WT + +G L+S R +++ +
Sbjct: 125 RAATREASLQVALARMEYSLPRLTRAWTHLSRQRGGSRGTRGEGETQLESDRRIVLAKVA 184
Query: 252 KLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFAT 311
KLKK L ++ QR R +++ PTVA+VGYTN GK++L+ AL ++ ++LFAT
Sbjct: 185 KLKKELEGVRRQRATARKQRRSVPLPTVALVGYTNAGKSSLLNALAGS-AVNAEDKLFAT 243
Query: 312 LDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDY 371
LD TT L +L DT+GFI +P L++ F+ TLE+ +LAD++IHV+D S+P+
Sbjct: 244 LDPTTRRLELSGGRSVLLTDTVGFIRKLPHALVDAFRATLEETLLADLLIHVIDASDPEA 303
Query: 372 LQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE------RVTEEYDLLISATRGT 425
++ + + L + E+ E ++V+ NK D +P R + L IS G
Sbjct: 304 VEHYRTTRQVLSEIGAEDT--EQIIVL-NKAD-LPHDPLLLAPLREADPQALFISTKNGL 359
Query: 426 GLAQLKEKVQDMILKAT 442
L LKE++ M+ K T
Sbjct: 360 HLDILKERIAVMLEKHT 376
>gi|418736930|ref|ZP_13293328.1| GTP-binding protein HflX [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410747089|gb|EKQ99994.1| GTP-binding protein HflX [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 611
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 160/290 (55%), Gaps = 22/290 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VVD+ I D + GKG LE + ++ + + V L Q K + D+ +
Sbjct: 247 VVDTFIQRKNRLDPSTVLGKGKLEEI--ILKAIQKHVELLVFDLELTPSQAKKISDIADI 304
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN----------IT 235
V DR +++ IF +AK+R+ +LQ+ +A+L YL R ++D NM+
Sbjct: 305 KVIDRTQLILDIFARNAKSRDGKLQVELAQLKYLKGRLTELDD--NMSRLTGGIGGRGPG 362
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ + + ER +L+ L LK +RE+ R +++R + P V +VGYTN GK+T + A
Sbjct: 363 ETKLEIGKRRVEERITRLEVELKSLKKRREINRRQRKRNELPAVGIVGYTNAGKSTFLNA 422
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT+ + L N+LFATLD TT P I+ DT+GFI ++P L FK TLE+
Sbjct: 423 LTNSEVL-SENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPELSNAFKATLEELG 481
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV--LVVGNKVD 403
+D+++HVVDVSNPDY Q + V++ L+ LE L H+ + V NK+D
Sbjct: 482 DSDLLVHVVDVSNPDYKLQMEAVEKILEELE-----LSHIPMIQVFNKID 526
>gi|85703310|ref|ZP_01034414.1| GTP-binding protein HflX [Roseovarius sp. 217]
gi|85672238|gb|EAQ27095.1| GTP-binding protein HflX [Roseovarius sp. 217]
Length = 424
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 203/409 (49%), Gaps = 34/409 (8%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ +V+ P I + + L E+ AL ++ VV S ++ L D FGKG
Sbjct: 9 RAWVIHPEIAGASRTREPA---LALEEAVALAQALPDIDVVGSDVVRLRKPDAGRLFGKG 65
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
LE L + + A V V V V + QQ+ L+ + V + DR ++++IF A TRE
Sbjct: 66 KLEELHQAMEA-ADVELVLVDGPVTPV-QQRNLEKAWGVKLLDRTGLILEIFSDRAATRE 123
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKK 255
LQ+ +A L Y R R + T++ +G +++ R + ++ +L++
Sbjct: 124 GVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDDQLVRLRR 181
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L K+ R + R + + FP VA+VGYTN GK+TL LT D ++ ++ LFATLD T
Sbjct: 182 QLEKVAKTRTLHRAARAKVPFPIVALVGYTNAGKSTLFNRLTGAD-VMAKDMLFATLDPT 240
Query: 316 THEGMLP-NRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQ 374
LP ++ DT+GFIS++PT L+ F+ TLE+ + AD+I HV D+S+P+ + Q
Sbjct: 241 MRRVALPEGGPEVILSDTVGFISDLPTELVAAFRATLEEVLSADLICHVRDISHPETVSQ 300
Query: 375 KQHVDETLQHLELEEKILEHVLVVGNKVD---------AVPPGERVTEEYDLLISATRGT 425
+ V L+ L + +K + + + NK+D AV ER ++ L ISA G
Sbjct: 301 SRDVAAILESLGVSDKTPQ--IEIWNKIDQLEDEARAAAVTQAER--QDDVLAISAITGQ 356
Query: 426 GLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDD 474
G+ L + + T + ++ G + WL + V + R+ D
Sbjct: 357 GINDLVAAIGAKLADVTHETVLHLQF-GEGRKRAWLFEKELVESERQTD 404
>gi|67922497|ref|ZP_00516006.1| GTP-binding protein, HSR1-related [Crocosphaera watsonii WH 8501]
gi|416391262|ref|ZP_11685657.1| GTP-binding protein HflX [Crocosphaera watsonii WH 0003]
gi|67855668|gb|EAM50918.1| GTP-binding protein, HSR1-related [Crocosphaera watsonii WH 8501]
gi|357263879|gb|EHJ12832.1| GTP-binding protein HflX [Crocosphaera watsonii WH 0003]
Length = 491
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 187/346 (54%), Gaps = 26/346 (7%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
LAE K LV + G V++ ++ GKG +E + +V+ R V S+D
Sbjct: 145 LAEVKRLVDTA-GGETVETIQQKRPKPHPQTLVGKGKVEEIALRVQ-TLRANLVVFSLD- 201
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY------- 223
L Q + L+ V V DR +++ IF A++R +LQ+ +A+L Y+ R
Sbjct: 202 LSPAQVRNLETQLGVKVVDRTEVILDIFAQRAQSRAGKLQVELAQLEYMLPRLVGRGQAM 261
Query: 224 -RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
R + L+++R + +R +L++ +NKL+ R +R ++Q+Q+ P++A+V
Sbjct: 262 SRLGGGIGTRGPGETKLETERRAIQKRISRLQQEVNKLQSHRSRLRQQRQKQEVPSIAIV 321
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTH--EGMLPNR---LRILYVDTIGFIS 337
GYTN GK+TLI ALT+ + + +QLFATLD TT G+ N L DT+GFI
Sbjct: 322 GYTNAGKSTLINALTNAE-VYTADQLFATLDPTTRRLSGIDDNTGQPYTFLLTDTVGFIH 380
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
+P +L++ F+ TLE+ AD ++H+VD+S+P + Q V LQ + L + +L+
Sbjct: 381 ELPPSLVDAFRATLEEVTEADALLHLVDLSHPAWQHHIQSVMNILQEMPL---VPGPILL 437
Query: 398 VGNKVDAVPPGERV---TEEYDL--LISATRGTGLAQLKEKVQDMI 438
V NK+D V GE + EEY L ISA++ GL L+ K+ ++
Sbjct: 438 VFNKIDTV-DGETLKVAQEEYPLAVFISASQRLGLETLRHKLSQLV 482
>gi|418718034|ref|ZP_13277571.1| GTP-binding protein HflX [Leptospira borgpetersenii str. UI 09149]
gi|421095589|ref|ZP_15556302.1| GTP-binding protein HflX [Leptospira borgpetersenii str. 200801926]
gi|410362299|gb|EKP13339.1| GTP-binding protein HflX [Leptospira borgpetersenii str. 200801926]
gi|410745027|gb|EKQ93759.1| GTP-binding protein HflX [Leptospira borgpetersenii str. UI 09149]
Length = 611
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 160/290 (55%), Gaps = 22/290 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VVD+ I D + GKG LE + ++ + + V L Q K + D+ +
Sbjct: 247 VVDTFIQRKNRLDPSTVLGKGKLEEI--ILKAIQKHVELLVFDLELTPSQAKKISDIADI 304
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN----------IT 235
V DR +++ IF +AK+R+ +LQ+ +A+L YL R ++D NM+
Sbjct: 305 KVIDRTQLILDIFARNAKSRDGKLQVELAQLKYLKGRLTELDD--NMSRLTGGIGGRGPG 362
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ + + ER +L+ L LK +RE+ R +++R + P V +VGYTN GK+T + A
Sbjct: 363 ETKLEIGKRRVEERITRLEVELKSLKKRREINRRQRKRNELPAVGIVGYTNAGKSTFLNA 422
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT+ + L N+LFATLD TT P I+ DT+GFI ++P L FK TLE+
Sbjct: 423 LTNSEVL-SENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPELSNAFKATLEELG 481
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV--LVVGNKVD 403
+D+++HVVDVSNPDY Q + V++ L+ LE L H+ + V NK+D
Sbjct: 482 DSDLLVHVVDVSNPDYKLQMEAVEKILEELE-----LSHIPMIQVFNKID 526
>gi|255348744|ref|ZP_05380751.1| putative nucleotide-binding protein [Chlamydia trachomatis 70]
gi|255503284|ref|ZP_05381674.1| putative nucleotide-binding protein [Chlamydia trachomatis 70s]
Length = 447
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 153/281 (54%), Gaps = 21/281 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ +V V DR ++++IF + A T EA LQ+ +A+ YL R + +
Sbjct: 113 QQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLPRLKRMWGHLSRQK 172
Query: 227 EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
+ KG ++ R ++ ER KL + L ++ QRE R K+R + PT A++
Sbjct: 173 SGGSGGGFVKGEGEKQIELDRRIVRERIHKLSRDLKNVERQREERRKAKKRNQIPTFALI 232
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ LT D+ N+LFATLD T +LP R+L DT+GFI +P T
Sbjct: 233 GYTNSGKSTLLNLLTSADTYA-ENKLFATLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHT 291
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+ FK TLE A+ DI++HVVD S+P L+ + + LQ L + + V+ V NK+
Sbjct: 292 LVAAFKSTLEAALQEDILLHVVDASHPLALEHVETTNAILQELGITQP---QVITVLNKM 348
Query: 403 DAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMI 438
D V G R+ + +SA G G+ +L ++DM+
Sbjct: 349 DKVADGVTASRLRLMSPNPVCVSAKTGEGIRELLRSMEDMV 389
>gi|389877556|ref|YP_006371121.1| GTP-binding protein HFLX [Tistrella mobilis KA081020-065]
gi|388528340|gb|AFK53537.1| GTP-binding protein HFLX [Tistrella mobilis KA081020-065]
Length = 455
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 201/389 (51%), Gaps = 28/389 (7%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E AL ++ G V + ++ + + G G ++ +K ++ A V V ++ +
Sbjct: 50 LDEGMALTGAL-GLDVAEGLVVPVARMRPSTLLGSGKVDEIKAKLEA-APVDLVVMNRPL 107
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
+ QQ+ L+ + V V DR ++++IF A+TRE RLQ+ +A L Y R R + T
Sbjct: 108 TPI-QQRNLEKAWNVKVIDRIWLILEIFADRARTREGRLQVELARLGY--QRSRLVRSWT 164
Query: 231 NMN---ITKGFL--------DSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +GFL ++ R ++ ++ +LK L ++ RE+ R K++ +P V
Sbjct: 165 HLERQRGGRGFLAGPGETQIETDRRIIDDKMARLKLQLAEVVRTRELHRKKRREVPYPVV 224
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL +T S++ ++ LFATLD T LP+ R++ DT+GF+S +
Sbjct: 225 ALVGYTNAGKSTLFNRVTGA-SVMAKDMLFATLDPTMRALDLPSGRRVILSDTVGFVSEL 283
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+ F+ TLE+ A +IIHV D+++PD Q++ V L L + ++ + VL
Sbjct: 284 PTGLIAAFRATLEEVREAALIIHVRDIADPDTGAQRRDVLHVLGELGMGHRLADDVLEFR 343
Query: 400 NKVDAV--PPGERVTEEY-----DLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV- 451
NK+D + ERV E + SA G GL +L + + A G + V
Sbjct: 344 NKLDMLEGEARERVLNEAARAEDAVAGSALSGEGLDRLFAAIDARL--AIGDELAHFDVP 401
Query: 452 RSGGSEYQWLMKHTAVSNIREDDTSAEHL 480
+ G WL +H V+ R DD + H+
Sbjct: 402 HADGQALAWLYEHGEVAE-RADDEAVAHV 429
>gi|365883797|ref|ZP_09422909.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 375]
gi|365287676|emb|CCD95440.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 375]
Length = 459
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 205/413 (49%), Gaps = 37/413 (8%)
Query: 84 TDHQVFVVQPFIKW-----GKKMKRNTTRDF--MLAESKALVSSIQGWRVVDSTIISLLS 136
T +V VV P+++ G + RD + E+ L +I VV+S + +
Sbjct: 20 TTGRVIVVGPYLRTRRGDDGASATHSEMRDVEARIDEAAGLARAIN-LTVVESILALIGQ 78
Query: 137 FDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVI 195
++ GKG ++ + + A A V +D L QQ+ L+ + V DR +++
Sbjct: 79 IRPATYLGKGKVDEIAGVI---ASQGAELVVMDCALSPIQQRNLEKAWNTKVLDRTGLIL 135
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRM 244
+IF AKT+E LQ+ +A L Y R R + T++ +G +++ R
Sbjct: 136 EIFGRRAKTKEGALQVELAHLNY--QRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRR 193
Query: 245 VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVP 304
++ +R +L+ L K++ R + R +QR + VA+VGYTN GK+TL LT D +
Sbjct: 194 LIGDRITRLENELKKVQATRRLHRAGRQRVPYRAVALVGYTNAGKSTLFNRLTRAD-VQA 252
Query: 305 RNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
+ LFATLD T LP+ + + DT+GFISN+PT L+ F+ TLE+ + AD+I+HV
Sbjct: 253 ADMLFATLDPTLRAISLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEADVILHVR 312
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD----------AVPPGERVTEE 414
D+S+ D Q+ V+ L L ++ + + ++ V NK+D A R E
Sbjct: 313 DMSHEDAEAQQHDVELVLSQLGIDPEATDSIIEVWNKIDRLDESARENLANIAARRPPER 372
Query: 415 YDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
++SA G G+ L + ++D + A ++T+ + G+ WL ++ V
Sbjct: 373 PCFMVSAETGEGVDALLQAIEDRLAAARTTLDLTIDA-ADGAGISWLHRNAEV 424
>gi|163815083|ref|ZP_02206470.1| hypothetical protein COPEUT_01239 [Coprococcus eutactus ATCC 27759]
gi|158449766|gb|EDP26761.1| GTP-binding protein HflX [Coprococcus eutactus ATCC 27759]
Length = 441
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 169/310 (54%), Gaps = 16/310 (5%)
Query: 142 FFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAH 201
+ G+G +E L+ + + T V D L Q LQD + V DR M+++ IF AH
Sbjct: 73 YLGRGKVEELRNMIY-ELGATGVCCD-DELSPAQLMNLQDALDIKVMDRTMVILDIFAAH 130
Query: 202 AKTREARLQIAIAELPYLWTRYRTIEDATN--------MNITKGFLDSKRMVLMEREQKL 253
A + E +LQ+ +A+L + TR + D+ + + L+ R V+ ER +L
Sbjct: 131 AGSYEGKLQVELAQLKFRATRLIGMRDSLSRLGGGIGTRGPGEKKLEIDRRVIRERISRL 190
Query: 254 KKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLD 313
K L ++ QR R ++QR P +VGYTN GK+TL+ A+T ++ ++LFATLD
Sbjct: 191 KAELRTVEAQRMQQRKQRQRSAVPVAGIVGYTNAGKSTLLNAMTGA-GVLEEDKLFATLD 249
Query: 314 VTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQ 373
TT LP IL DT+GFI +P L+E F TLE+A D+IIHVVDVS+ ++ +
Sbjct: 250 PTTRNYRLPGGQNILLTDTVGFIRKLPHHLVEAFGSTLEEAKYCDVIIHVVDVSDVNWDK 309
Query: 374 QKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT-----EEYDLLISATRGTGLA 428
+ V TL+ L+++EK + ++ V NKVD + + V + + +SA G GL
Sbjct: 310 NIETVYHTLKQLKIDEKSGKPIITVFNKVDKIEKDDLVGVRDLRADRTIYVSAKNGQGLD 369
Query: 429 QLKEKVQDMI 438
+L +++++
Sbjct: 370 ELASAIEEIL 379
>gi|415710715|ref|ZP_11463882.1| GTP-binding protein [Gardnerella vaginalis 6420B]
gi|388055210|gb|EIK78129.1| GTP-binding protein [Gardnerella vaginalis 6420B]
Length = 512
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 179/360 (49%), Gaps = 26/360 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLH 174
A ++ G V D + D ++ G G EL + DA V D L
Sbjct: 119 AALAQTAGAVVCDGMLQQRYRPDAATYVGSGKARELAAVVAQHDADTIIVD---DDLPPS 175
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--- 231
Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 176 QRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQLQYMLPRLRGWGAALSRQA 235
Query: 232 --------MNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++G ++K R + R KL+ + + R++ R ++RQ PTV
Sbjct: 236 GGRAAGDAGIGSRGPGETKIEMDRRAIRNRISKLRHDIANMAPARDVKRGSRRRQDIPTV 295
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GK+++I LT LV N LFATLD + VDT+GF+ +
Sbjct: 296 AVVGYTNAGKSSIINRLTGSQELV-ENALFATLDTAVRRSQTQDGRSYTLVDTVGFVRRL 354
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E FK TLE+ AD+I+HVVD S+PD + Q V+E L ++ E I + ++
Sbjct: 355 PTQLVEAFKSTLEEVGQADVILHVVDGSHPDPISQINAVNEVLANISGVEDIPQ--IMAL 412
Query: 400 NKVDAVPPG--ERVTEEYD--LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGG 455
NK D + ER + Y +++SA G L L+ ++++++ R ++T+ GG
Sbjct: 413 NKSDMMSDAARERFSSLYPDAVIVSAFSGENLQILRNRLEELLPSPRVRVDVTLPYEFGG 472
>gi|309811288|ref|ZP_07705077.1| GTP-binding protein HflX [Dermacoccus sp. Ellin185]
gi|308434770|gb|EFP58613.1| GTP-binding protein HflX [Dermacoccus sp. Ellin185]
Length = 508
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 186/360 (51%), Gaps = 29/360 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+ + L D ++ GKG E LK V + T ++ L Q
Sbjct: 114 AALAETAGSEVLAGVVQRRLRPDPGTWLGKGKAEELKEIVIAEGADT--VIADGELAPSQ 171
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI- 234
++ L+D+ +V V DR +++ IF HAK++E + Q+ +A++ YL R R ++ +
Sbjct: 172 RRALEDVVKVKVIDRTALILDIFAQHAKSKEGKAQVELAQMQYLLPRLRGWGESMSRQAG 231
Query: 235 ----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
TK LD +R + R KL++ + ++K R+ R+ ++ P+
Sbjct: 232 GQAAGGQGMGSRGPGETKIELDRRR--INTRMAKLRREIAEMKTTRDTKRSGRRNNNVPS 289
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+ GYTN GK++++ LT+ LV +NQLFATLD T + DT+GF+ +
Sbjct: 290 VAIAGYTNAGKSSILNRLTNAGVLV-QNQLFATLDPTVRRAETADGRAYTLADTVGFVRD 348
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+P L+E F+ TLE+ AD+++HVVD S+PD Q V E L ++ + ++ ++V+
Sbjct: 349 LPHQLVEAFRSTLEEVADADLLLHVVDGSHPDPESQISAVREVLADVDASD--VKEIIVI 406
Query: 399 GNKVDAVPPG--ERVT--EEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG 454
NK D P +R+ E+Y + +SA G GL +L + + D + K R ++ + G
Sbjct: 407 -NKADVADPDVIDRLMRHEKYAIAVSARTGAGLPELLQLIADELPKPERRVDVLLPYERG 465
>gi|77551765|gb|ABA94562.1| small GTP-binding protein domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|218194387|gb|EEC76814.1| hypothetical protein OsI_14944 [Oryza sativa Indica Group]
Length = 552
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 168/326 (51%), Gaps = 19/326 (5%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G VV ST L + + +++ G G + +K + T +F D L Q + L+
Sbjct: 167 GLMVVGSTYQKLSTPNPRTYIGSGKVAEIKSAIHAHDVETVIFD--DELSPGQLRNLEKS 224
Query: 183 FQ--VPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWTRYRTIEDATNMN 233
F V V DR +++ IF A T EA LQ+ +A++ Y +W+
Sbjct: 225 FGGGVRVCDRTALILDIFNQRAATHEAALQVTLAQMEYQLPRLTKMWSHLERQSGGQVKG 284
Query: 234 ITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLI 293
+ + ++ + +L + L+K L ++ R++ RN++Q P V++VGYTN GK+TL+
Sbjct: 285 MGEKQIEVDKRILRTQISALRKELESVRKHRKLYRNRRQSVPIPVVSLVGYTNAGKSTLL 344
Query: 294 KALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLED 353
LT D L ++LFATLD TT ++ N L DT+GFI +PT L+ F+ TLE+
Sbjct: 345 NRLTGADVLA-EDKLFATLDPTTRRVLMKNGTEFLLTDTVGFIQKLPTMLVAAFRATLEE 403
Query: 354 AMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTE 413
+ +I+H+VD+S+P QQ VD+ L+ L++E LVV NK+D RV E
Sbjct: 404 ISESSVIVHLVDISHPLAQQQIDAVDKVLKELDIESI---PKLVVWNKIDNTDDTLRVKE 460
Query: 414 EYD----LLISATRGTGLAQLKEKVQ 435
E + + ISA G GL + +Q
Sbjct: 461 EAEKQGIICISAINGDGLEEFCNAIQ 486
>gi|15605103|ref|NP_219888.1| GTP binding protein [Chlamydia trachomatis D/UW-3/CX]
gi|385243586|ref|YP_005811432.1| GTP-binding protein [Chlamydia trachomatis D-EC]
gi|385244466|ref|YP_005812310.1| GTP-binding protein [Chlamydia trachomatis D-LC]
gi|3328804|gb|AAC67975.1| GTP Binding Protein [Chlamydia trachomatis D/UW-3/CX]
gi|297748509|gb|ADI51055.1| HflX [Chlamydia trachomatis D-EC]
gi|297749389|gb|ADI52067.1| HflX [Chlamydia trachomatis D-LC]
gi|440527973|emb|CCP53457.1| GTPase HflX [Chlamydia trachomatis D/SotonD5]
gi|440528864|emb|CCP54348.1| GTPase HflX [Chlamydia trachomatis D/SotonD6]
gi|440532438|emb|CCP57948.1| GTPase HflX [Chlamydia trachomatis G/SotonG1]
Length = 447
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 21/281 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ +V V DR ++++IF + A T EA LQ+ +A+ YL R + +
Sbjct: 113 QQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLPRLKRMWGHLSRQK 172
Query: 227 EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
+ KG ++ R ++ ER KL + L ++ QRE R K+R + PT A++
Sbjct: 173 SGGSGGGFVKGEGEKQIELDRRIVRERIHKLSRDLKNVERQREERRKAKKRNQIPTFALI 232
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ LT D+ V N+LFATLD T +LP R+L DT+GFI +P T
Sbjct: 233 GYTNSGKSTLLNLLTSADTYV-ENKLFATLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHT 291
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+ FK TLE A+ DI++HVVD S+P L+ + LQ L + + V+ V NK+
Sbjct: 292 LVAAFKSTLEAALQEDILLHVVDASHPLALEYVETTKAILQELGITQP---QVITVLNKM 348
Query: 403 DAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMI 438
D V G R+ + +SA G G+ +L ++DM+
Sbjct: 349 DKVADGVTASRLRLMSPNPVCVSAKTGEGIRELLRSMEDMV 389
>gi|355681679|ref|ZP_09062079.1| GTP-binding protein HflX [Clostridium citroniae WAL-17108]
gi|354811359|gb|EHE95991.1| GTP-binding protein HflX [Clostridium citroniae WAL-17108]
Length = 422
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 167/310 (53%), Gaps = 25/310 (8%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG ++ + R + + T V V D L Q + L+D V DR M+++ IF A
Sbjct: 57 TYLGKGKIDEV-RDLIWELGATGV-VCDDELSPAQLRNLEDALDTKVMDRTMVILDIFAA 114
Query: 201 HAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQK 252
A TRE ++Q+ +A+L Y R R + L++ R ++ +R +
Sbjct: 115 RANTREGKIQVELAQLKYRAVRLVGMRNSLSRLGGGIGTRGPGEKKLETDRRLIHQRIGQ 174
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
LK+ L +K RE+ R ++++ T A+VGYTN GK+TL+ LT ++ ++LFATL
Sbjct: 175 LKEELEDVKRHREVTRQQREKNFALTAAIVGYTNAGKSTLLNRLTGA-GILAEDKLFATL 233
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT L + +IL DT+GFI +P L+E FK TLE+A +DII+HVVD +NP
Sbjct: 234 DPTTRSFYLEDGQQILLTDTVGFIRKLPHHLIEAFKSTLEEARYSDIILHVVDCANPQMD 293
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAV-------PPGERV----TEEYDLLISA 421
Q V ETL+ LE+ +K V+ V NK D P ++V + +Y + ISA
Sbjct: 294 MQMHVVKETLRELEIVDKT---VVTVFNKTDRFREMESEGQPLQQVPRDFSSDYQVRISA 350
Query: 422 TRGTGLAQLK 431
G GL +L+
Sbjct: 351 KTGEGLDELE 360
>gi|163795484|ref|ZP_02189450.1| putative gtp-binding protein [alpha proteobacterium BAL199]
gi|159179083|gb|EDP63616.1| putative gtp-binding protein [alpha proteobacterium BAL199]
Length = 437
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 218/445 (48%), Gaps = 33/445 (7%)
Query: 82 LGTDHQVFVVQPFIKWGKKMKRNTTRD--FMLAESKALVSSIQGWRVVDSTIISLLSFDK 139
+GT + VV P +K + ++ RD L E+ L S+I V + ++++
Sbjct: 1 MGT--RALVVHPRLKTKEDASADSVRDPEARLEEAVGLTSAID-LLSVHAEVVTVNKPRP 57
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
S G G +E + + V +A V V L QQ+ L+ V DR ++++IF
Sbjct: 58 GSLLGGGQIERIAQLV--EALEIEVVVVDRPLTPVQQRNLEKELDAKVIDRTQLILEIFG 115
Query: 200 AHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLME 248
A A+T E RL + +A L + R R + T++ +G L+ R ++ +
Sbjct: 116 ARARTHEGRLHVDLASLTF--QRSRLVRSWTHLERQRGGGGFMGGPGERQLEIDRRLIDD 173
Query: 249 REQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQL 308
+ ++++ L ++K RE+ R ++R +P VA+VGYTN GK+TL L+ S+V + L
Sbjct: 174 KIIRIRRELEEVKRTRELHRGARRRVPYPIVALVGYTNAGKSTLFNRLSGA-SVVAEDLL 232
Query: 309 FATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSN 368
FATLD T +P I+ DT+GFIS++PT L+ F+ TLE+ AD+++HV D+++
Sbjct: 233 FATLDPTMRRIEVPGGRTIILSDTVGFISDLPTHLVAAFRATLEEVTEADVVVHVRDIAH 292
Query: 369 PDYLQQKQHVDETLQHLELEEKILE-HVLVVGNKVDAVPPGERVT--------EEYDLLI 419
PD QK V+ L L ++E +L V NK+D +P +R+ E +
Sbjct: 293 PDSNAQKSDVEGVLASLGIDETTRSGRMLEVLNKIDRLPDDQRIAVKQRAASGNEPVAAV 352
Query: 420 SATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEH 479
SA G G+ +L+ + ++ T+ + S G+ WL H V + D
Sbjct: 353 SAITGEGIDELRSVIAQLLGVNDQVCAFTLDL-SDGAAIAWLYAHGEV--VERTDAPEGT 409
Query: 480 LLLDVVMTDVIMNKFKHEFISSRKR 504
+ V + ++F+ F S+ +R
Sbjct: 410 TAVSVRLASADADRFEKRFGSAIRR 434
>gi|452960769|gb|EME66084.1| GTP-binding protein HflX [Rhodococcus ruber BKS 20-38]
Length = 482
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 167/322 (51%), Gaps = 25/322 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G E L++ V T + L Q L+ + +V V DR +++ I
Sbjct: 108 DAATYIGSGKAEELRQVVLATGADTVICDGE--LTPAQLTALEKIVKVKVIDRTALILDI 165
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HA +RE + Q+++A++ Y+ R R ++ N G +++
Sbjct: 166 FAQHATSREGKAQVSLAQMEYMLPRLRGWGESMSRQAGGRAGSNGGVGLRGPGETKIETD 225
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R + ER KL++ + +K R+ R ++ R + P+VA+VGYTN GK++L+ LT L
Sbjct: 226 RRRIRERMAKLRREIKAMKSVRDTKRTRRMRNRIPSVAIVGYTNAGKSSLLNKLTGSGVL 285
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V +N LFATLD TT LP+ + DT+GF+ ++PT L+E F+ TLE+ AD+++H
Sbjct: 286 V-QNALFATLDPTTRRAELPDGREYVLTDTVGFVRHLPTQLVEAFRSTLEEVTDADLLLH 344
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELEEKILEHV-LVVGNKVDAVPPGERVTEEYDLL--- 418
VVD S+P Q + V E + + E L+V NKVDA P +TE LL
Sbjct: 345 VVDGSDPLPTDQIKAVREVITDVLRESDAPPPPELIVVNKVDAADP-LTITELRALLPDA 403
Query: 419 --ISATRGTGLAQLKEKVQDMI 438
+SA G GL L+E + ++
Sbjct: 404 VFVSARSGAGLDDLREHLAALL 425
>gi|54295993|ref|YP_122362.1| hypothetical protein lpp0010 [Legionella pneumophila str. Paris]
gi|53749778|emb|CAH11158.1| hypothetical protein lpp0010 [Legionella pneumophila str. Paris]
Length = 414
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 182/342 (53%), Gaps = 25/342 (7%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D LAE + L S + V+D + + + D K + GKG E + V + A V
Sbjct: 24 DKALAEFEELALSAKA-EVLDCVLGARATPDAKYYVGKGKAEEIAHLVN---MLDADLVL 79
Query: 168 VD-VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI 226
V+ L Q++ L+ LF V DR +++ IF A+T E +LQ+ +A+L +L TR I
Sbjct: 80 VNHELSPSQERNLERLFGCRVVDRSGLILDIFAQRARTFEGKLQVELAQLQHLSTRL--I 137
Query: 227 EDATNMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
T++ KG L++ R +L ER + + K L K++ R+ R +++
Sbjct: 138 RGWTHLERQKGGIGLRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKASM 197
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
PTV++VGYTN GK+TL LT + + V +QLFATLD T + LP + DT+GFI
Sbjct: 198 PTVSLVGYTNAGKSTLFNVLTGEHTYVA-DQLFATLDPTMRKLELPGSSAAILADTVGFI 256
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++P L+E F+ TLE+ AD+++HV+D+S+P++ + V + L L++ V+
Sbjct: 257 RDLPHHLVEAFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDELKVSNI---PVI 313
Query: 397 VVGNKVDA----VPPGERVTEEYDLLISATRGTGLAQLKEKV 434
V NK+D P + + + +SAT G GL LKE +
Sbjct: 314 QVFNKIDLQEGWQPKIDYTEDSCKVWLSATTGAGLDLLKEAI 355
>gi|300771631|ref|ZP_07081506.1| GTP-binding protein HflX [Sphingobacterium spiritivorum ATCC 33861]
gi|300761620|gb|EFK58441.1| GTP-binding protein HflX [Sphingobacterium spiritivorum ATCC 33861]
Length = 396
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 177/332 (53%), Gaps = 38/332 (11%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
DK +F G G +E +K + DA + V D L Q + +++ F+V + DR +++ I
Sbjct: 61 DKATFIGSGKMEEIKSYI--DAEEIDMVVFDDELSPSQLRNIENFFKVKILDRSNLILDI 118
Query: 198 FKAHAKTREARLQIAIAELPY-------LWTRYRTIEDATNM-NITKGFLDSKRMVLMER 249
F +HAKT +A+ Q+ +A+L Y +WT M + ++S R +++ +
Sbjct: 119 FASHAKTAQAKTQVELAQLQYILPRLTRMWTHLERQRGGIGMRGPGESQIESDRRMILNK 178
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
K+ L + Q E R K R + VA+VGYTN GK+T++ ++ D L+ N+LF
Sbjct: 179 ISLFKERLKSIDKQNETQR--KNRGEMIRVALVGYTNVGKSTIMNMISKSDVLI-ENKLF 235
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T + ++ N L L DT+GFI +P L+E FK TL++ AD++IHVVD+S+P
Sbjct: 236 ATLDTTVRKVVIDN-LPFLLSDTVGFIRKLPHHLVECFKSTLDEVREADVLIHVVDISHP 294
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG---------ERVT-EEY---- 415
++ V+ETL+ L +K V+ + NK+DA P VT EE+
Sbjct: 295 NFEDHIHAVNETLKDLGALDK---PVITIFNKIDAYKPAVEEGDEGEEREVTLEEFRNSW 351
Query: 416 -------DLLISATRGTGLAQLKEKVQDMILK 440
+ ISAT T + + K+K+ D+I+K
Sbjct: 352 MGKNSDPAIFISATNKTNVEEFKQKLYDIIVK 383
>gi|397662567|ref|YP_006504105.1| putative GTPase [Legionella pneumophila subsp. pneumophila]
gi|395125978|emb|CCD04153.1| putative GTPase [Legionella pneumophila subsp. pneumophila]
Length = 414
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 182/342 (53%), Gaps = 25/342 (7%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D LAE + L S + V+D + + + D K + GKG E + V + A V
Sbjct: 24 DKALAEFEELALSAKA-EVLDCVLGARATPDAKYYVGKGKAEEIAHLVN---MLDADLVL 79
Query: 168 VD-VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI 226
V+ L Q++ L+ LF V DR +++ IF A+T E +LQ+ +A+L +L TR I
Sbjct: 80 VNHELSPSQERNLERLFGCRVVDRSGLILDIFAQRARTFEGKLQVELAQLQHLSTRL--I 137
Query: 227 EDATNMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
T++ KG L++ R +L ER + + K L K++ R+ R +++
Sbjct: 138 RGWTHLERQKGGIGLRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKASM 197
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
PTV++VGYTN GK+TL LT + + V +QLFATLD T + LP + DT+GFI
Sbjct: 198 PTVSLVGYTNAGKSTLFNVLTGEHTYVA-DQLFATLDPTMRKLELPGSSAAILADTVGFI 256
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++P L+E F+ TLE+ AD+++HV+D+S+P++ + V + L L++ V+
Sbjct: 257 RDLPHHLVEAFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDELKVNNI---PVI 313
Query: 397 VVGNKVDA----VPPGERVTEEYDLLISATRGTGLAQLKEKV 434
V NK+D P + + + +SAT G GL LKE +
Sbjct: 314 QVFNKIDLQEGWQPKIDYTEDSCKVWLSATTGAGLDLLKEAI 355
>gi|392377300|ref|YP_004984459.1| putative GTP-binding protein (hflX) [Azospirillum brasilense Sp245]
gi|356878781|emb|CCC99673.1| putative GTP-binding protein (hflX) [Azospirillum brasilense Sp245]
Length = 468
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 201/423 (47%), Gaps = 38/423 (8%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D L+E+ AL +I+ V + +I + D + FG+G + + V A V
Sbjct: 58 DARLSEAIALAQAIR-LEVPHAEVIRVARPDPATLFGRGTADRIGGMVEA---FHADLVV 113
Query: 168 VD-VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI 226
+D L QQ+ L+ V DR ++++IF A TRE +LQ+ +A L Y R R +
Sbjct: 114 IDHPLSPVQQRNLERRCMAKVIDRTGLILEIFGERAHTREGQLQVELAALTY--QRSRLV 171
Query: 227 EDATNMN-----------ITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQK 275
T++ + L+ R ++ ER +LK L +++ R++ R+ +QR
Sbjct: 172 RSWTHLERQRGGFGFLGGPGESQLELDRRLIAERISRLKSDLEEVRRTRKLHRSARQRGG 231
Query: 276 FPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGF 335
P VA+VGYTN GK+TL L+ + + LFATLD T L + + DT+GF
Sbjct: 232 TPLVALVGYTNAGKSTLFNRLSGA-GVTAEDMLFATLDPTVRRIALSSGKTMALSDTVGF 290
Query: 336 ISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV 395
+S +PT L+ F+ TLE+ AD+I+HV DVS+PD QK VD L L ++ V
Sbjct: 291 VSELPTQLVAAFRATLEEVQAADLILHVRDVSHPDTAAQKADVDSVLADLGIDAANDPRV 350
Query: 396 LVVGNKVDAVPPGERVT-------------EEYDLLISATRGTGLAQLKEKVQDMILKAT 442
+ V NK D +P R EE + +SA G GL L + + + +
Sbjct: 351 VEVLNKTDQMPATARGALHMRLANQRMMEGEERAVAVSALTGEGLDDLLDLLDRRV--SA 408
Query: 443 GRKNITMRVR-SGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISS 501
R+ + + V S G WL +H V + R++D A + V + +F+ F+
Sbjct: 409 ERQVLELSVNLSDGRALAWLYEHGQVLDRRDEDGQAH---VHVALAPADAARFESRFVGQ 465
Query: 502 RKR 504
R
Sbjct: 466 DSR 468
>gi|52840266|ref|YP_094065.1| GTP binding protein HflX [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|378775971|ref|YP_005184397.1| GTP binding protein HflX [Legionella pneumophila subsp. pneumophila
ATCC 43290]
gi|52627377|gb|AAU26118.1| GTP binding protein HflX [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|364506774|gb|AEW50298.1| GTP binding protein HflX [Legionella pneumophila subsp. pneumophila
ATCC 43290]
Length = 419
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 182/342 (53%), Gaps = 25/342 (7%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D LAE + L S + V+D + + + D K + GKG E + V + A V
Sbjct: 29 DKALAEFEELALSAKA-EVLDCVLGARATPDAKYYVGKGKAEEIAHLVN---MLDADLVL 84
Query: 168 VD-VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI 226
V+ L Q++ L+ LF V DR +++ IF A+T E +LQ+ +A+L +L TR I
Sbjct: 85 VNHELSPSQERNLERLFGCRVVDRSGLILDIFAQRARTFEGKLQVELAQLQHLSTRL--I 142
Query: 227 EDATNMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
T++ KG L++ R +L ER + + K L K++ R+ R +++
Sbjct: 143 RGWTHLERQKGGIGLRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKASM 202
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
PTV++VGYTN GK+TL LT + + V +QLFATLD T + LP + DT+GFI
Sbjct: 203 PTVSLVGYTNAGKSTLFNVLTGEHTYVA-DQLFATLDPTMRKLELPGSSAAILADTVGFI 261
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++P L+E F+ TLE+ AD+++HV+D+S+P++ + V + L L++ V+
Sbjct: 262 RDLPHHLVEAFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDELKVNNI---PVI 318
Query: 397 VVGNKVDA----VPPGERVTEEYDLLISATRGTGLAQLKEKV 434
V NK+D P + + + +SAT G GL LKE +
Sbjct: 319 QVFNKIDLQEGWQPKIDYTEDSCKVWLSATTGAGLDLLKEAI 360
>gi|229817997|ref|ZP_04448279.1| hypothetical protein BIFANG_03284 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229784601|gb|EEP20715.1| hypothetical protein BIFANG_03284 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 547
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 177/363 (48%), Gaps = 28/363 (7%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR 156
W + + L E AL + G V D + D ++ G G + + V
Sbjct: 134 WSSAVTTQAKAEESLRELAALAQT-AGAEVCDGLLQHRSRPDAATYVGSGKAKEIADIV- 191
Query: 157 GDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
AR A + VD L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+
Sbjct: 192 --AREEADTIVVDDDLPPSQRRGLEDAAKVKVVDRTAVILDIFAQHATSREGKAQVELAQ 249
Query: 216 LPYLWTRYRTIEDATNMNI------------TKGFLDSK----RMVLMEREQKLKKALNK 259
L Y+ R R + + ++G +++ R V+ R +LKK + +
Sbjct: 250 LEYMLPRLRGWGGSLSRQAGGQAAGQNGGIGSRGPGETQIEMDRRVIRTRIARLKKQIAQ 309
Query: 260 LKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEG 319
+ RE+ R ++R PT+AVVGYTN GK++L LT LV N LFATLD
Sbjct: 310 MAPAREVKRGSRRRYGLPTIAVVGYTNAGKSSLTNRLTGSGELV-ENALFATLDTAVRRT 368
Query: 320 MLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVD 379
+ YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q V+
Sbjct: 369 KAGDGRLYAYVDTVGFVRRLPTQLVEAFKSTLEEVAEADVILHVVDASHPDPFSQIDAVN 428
Query: 380 ETLQHLELEEKILEHVLVVGNKVDAVPPG--ERVT--EEYDLLISATRGTGLAQLKEKVQ 435
E L +E I ++ NK D ER+ E ++SA G G+ QL+E V+
Sbjct: 429 EILADIEGTAAIPR--ILAFNKADLCDETTLERLAALEPDAHIVSAYSGDGVRQLREAVE 486
Query: 436 DMI 438
++
Sbjct: 487 ALL 489
>gi|456886863|gb|EMF97978.1| GTP-binding protein HflX [Leptospira borgpetersenii str. 200701203]
Length = 493
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 160/290 (55%), Gaps = 22/290 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VVD+ I D + GKG LE + ++ + + V L Q K + D+ +
Sbjct: 129 VVDTFIQRKNRLDPSTVLGKGKLEEI--ILKAIQKHVELLVFDLELTPSQAKKISDIADI 186
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN----------IT 235
V DR +++ IF +AK+R+ +LQ+ +A+L YL R ++D NM+
Sbjct: 187 KVIDRTQLILDIFARNAKSRDGKLQVELAQLKYLKGRLTELDD--NMSRLTGGIGGRGPG 244
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ + + ER +L+ L LK +RE+ R +++R + P V +VGYTN GK+T + A
Sbjct: 245 ETKLEIGKRRVEERITRLEVELKSLKKRREINRRQRKRNELPAVGIVGYTNAGKSTFLNA 304
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT+ + L N+LFATLD TT P I+ DT+GFI ++P L FK TLE+
Sbjct: 305 LTNSEVL-SENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPELSNAFKATLEELG 363
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV--LVVGNKVD 403
+D+++HVVDVSNPDY Q + V++ L+ LE L H+ + V NK+D
Sbjct: 364 DSDLLVHVVDVSNPDYKLQMEAVEKILEELE-----LSHIPMIQVFNKID 408
>gi|54292974|ref|YP_125389.1| hypothetical protein lpl0010 [Legionella pneumophila str. Lens]
gi|53752806|emb|CAH14240.1| hypothetical protein lpl0010 [Legionella pneumophila str. Lens]
Length = 414
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 182/342 (53%), Gaps = 25/342 (7%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D LAE + L S + V+D + + + D K + GKG E + V + A V
Sbjct: 24 DKALAEFEELALSAKA-EVLDCVLGARATPDAKYYVGKGKAEEIAHLVN---MLDADLVL 79
Query: 168 VD-VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI 226
V+ L Q++ L+ LF V DR +++ IF A+T E +LQ+ +A+L +L TR I
Sbjct: 80 VNHELSPSQERNLERLFGCRVVDRSGLILDIFAQRARTFEGKLQVELAQLQHLSTRL--I 137
Query: 227 EDATNMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
T++ KG L++ R +L ER + + K L K++ R+ R +++
Sbjct: 138 RGWTHLERQKGGIGLRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKASM 197
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
PTV++VGYTN GK+TL LT + + V +QLFATLD T + LP + DT+GFI
Sbjct: 198 PTVSLVGYTNAGKSTLFNVLTGEHTYVA-DQLFATLDPTMRKLELPGSSAAILADTVGFI 256
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++P L+E F+ TLE+ AD+++HV+D+S+P++ + V + L L++ V+
Sbjct: 257 RDLPHHLVEAFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDELKVNNI---PVI 313
Query: 397 VVGNKVDA----VPPGERVTEEYDLLISATRGTGLAQLKEKV 434
V NK+D P + + + +SAT G GL LKE +
Sbjct: 314 QVFNKIDLQEGWQPKIDYTEDSCKVWLSATTGAGLDLLKEAI 355
>gi|408419738|ref|YP_006761152.1| GTP-binding protein HflX [Desulfobacula toluolica Tol2]
gi|405106951|emb|CCK80448.1| HflX: GTP-binding protein [Desulfobacula toluolica Tol2]
Length = 540
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 169/321 (52%), Gaps = 31/321 (9%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
+ D K GKG L L ++ + V L Q + + D ++ V DR +++
Sbjct: 231 AIDPKFVVGKGKLSSLI--IKAIQNYATLLVFDRELSASQIRSITDFVEMKVIDRTQLIL 288
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLM 247
IF AK+RE + Q+ +A++ YL R R + L+ R +
Sbjct: 289 DIFAKQAKSREGKFQVELAQMEYLLPRLISKNTAMSRLTGGIGGRGPGETKLELNRRRVR 348
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
E+ +LKK + K++ QR+ +++++R++ P +++VGYTN GK+TL+ LT + N+
Sbjct: 349 EKINQLKKEIAKIRKQRQQQKSRRKRKELPIISIVGYTNAGKSTLLNTLTQS-RITAANR 407
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD ++ P ++ DT+GFI ++P L+E F TL++ ADII+HV+D+S
Sbjct: 408 LFATLDPSSRRLRFPRDTEVIITDTVGFIQDLPKELMEAFHATLDELSDADIILHVIDIS 467
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHV--LVVGNKVDAVPPGERVTEEYD--------L 417
NP Y QQK+ V++ L++L+ LEH+ L + NK D + +++D
Sbjct: 468 NPRYRQQKESVEKILKNLK-----LEHIPTLYIFNKTDKIS-----LDDFDDQWLLNQGF 517
Query: 418 LISATRGTGLAQLKEKVQDMI 438
+ AT+ L L EK++ M+
Sbjct: 518 PVCATQKQSLKLLVEKLESMV 538
>gi|114569999|ref|YP_756679.1| small GTP-binding protein [Maricaulis maris MCS10]
gi|114340461|gb|ABI65741.1| GTP-binding protein HflX [Maricaulis maris MCS10]
Length = 450
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 194/392 (49%), Gaps = 31/392 (7%)
Query: 131 IISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDR 190
I+ D +FG+G L+ L + G+ + ++ + QQ+ L++ + V V DR
Sbjct: 48 ILQTRKIDSGRYFGRGKLDELGAMI-GELEANVAVIDTNLSPI-QQRNLENAWNVKVIDR 105
Query: 191 YMIVIQIFKAHAKTREARLQIAIAELPYLWTRY-RTIEDATNMNITKGFL--------DS 241
++++IF A+T+E LQ+ +A L Y +R RT +GFL ++
Sbjct: 106 TGLILEIFGQRARTKEGVLQVELARLAYERSRLVRTWTHLERQRGGRGFLAGPGETQIET 165
Query: 242 KRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDS 301
R +L E+ KL++ L++++ R + R+++Q FPTVA+VGYTN GK+TL LT
Sbjct: 166 DRRLLNEKMAKLRRQLDEVRRTRALHRSQRQDVPFPTVALVGYTNAGKSTLFNKLTGA-G 224
Query: 302 LVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIII 361
+ ++ FATLD T LP RIL DT+GFI+++PT L+ F+ TLE+ AD+++
Sbjct: 225 VFAQDMPFATLDPTVRAVDLPGGTRILLSDTVGFITDLPTELIAAFRATLEEVREADLLV 284
Query: 362 HVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEY------ 415
H++D S+PD + Q V+ L +E + +L NK D + + TE+
Sbjct: 285 HIIDASDPDREGRIQDVESVLDAIEAGPAHDQAMLEAWNKSDRL--DDESTEDLAITIQM 342
Query: 416 ---------DLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTA 466
L +SA G G+ L + ++ + R I + + + WL H
Sbjct: 343 ANLKAGKPVKLAVSAVTGQGVDSLIDAIERTLSSENERLQIIVPPQDARA-LAWLHAHGD 401
Query: 467 VSNIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
V + E D + + V + V +F+ +F
Sbjct: 402 VLD-SEIDPATGATTIQVRLHPVEAGRFRSQF 432
>gi|407775001|ref|ZP_11122297.1| GTPase [Thalassospira profundimaris WP0211]
gi|407281949|gb|EKF07509.1| GTPase [Thalassospira profundimaris WP0211]
Length = 392
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 178/328 (54%), Gaps = 22/328 (6%)
Query: 129 STIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPV 187
+ I+ + + FGKG E L Q++ + A V ++ L QQ+ L+ ++ V
Sbjct: 3 AEIVPIAKLRPSTLFGKGVTERLGLQIKA---IEADIVMINGQLSPIQQRNLEREWKCKV 59
Query: 188 FDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY-RTIEDATNMNITKGFLDSK---- 242
DR ++++IF A+TRE RLQ+ +A L Y +R RT +GFL
Sbjct: 60 IDRTGLILEIFADRARTREGRLQVQLALLSYQRSRLVRTWTHLERQRGGRGFLAGPGERQ 119
Query: 243 ----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTD 298
R ++ ++ KL++ L ++K RE+ R ++R +P VA+VGYTN GK+TL LT
Sbjct: 120 IEIDRRLIGDKLAKLRRELEEVKRTRELHREARRRVPYPIVALVGYTNAGKSTLFNQLTV 179
Query: 299 DDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLAD 358
+ + + LFATLD T +LP+ +++ DT+GF+S++P L+ F+ TLE+ + AD
Sbjct: 180 SE-VFAEDMLFATLDPTMRGLILPSGRKVILSDTVGFVSDLPHDLVAAFRATLEEVLEAD 238
Query: 359 IIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG-NKVDAVPPGE-RVTEEYD 416
+I+HV DV++P+ +QK V E L+ L L++ I LV NK+D + E + EY
Sbjct: 239 LIVHVRDVASPETEEQKLDVLEVLKELGLQKAIDGEELVEALNKIDQLKGEELQAVSEYS 298
Query: 417 ------LLISATRGTGLAQLKEKVQDMI 438
+ ISA +GT L ++D +
Sbjct: 299 ARHDNTIAISAIKGTNCDALLGLIEDRL 326
>gi|311739636|ref|ZP_07713471.1| GTP-binding protein HflX [Corynebacterium pseudogenitalium ATCC
33035]
gi|311305452|gb|EFQ81520.1| GTP-binding protein HflX [Corynebacterium pseudogenitalium ATCC
33035]
Length = 497
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 172/323 (53%), Gaps = 31/323 (9%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D +F G G ++ L+ V +A V L Q L+ V DR M+++ I
Sbjct: 117 DSGTFIGSGKVKELRDIV--EATGADTVVCDGELNPGQLTALERALNTKVIDRTMLILDI 174
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------------LD 240
F HAK++E + Q+++A+L YL+T R N++ G ++
Sbjct: 175 FAQHAKSKEGKAQVSLAQLEYLYTHTRGW--GGNLSRQAGGRAGSNGGVGLRGPGETKIE 232
Query: 241 SKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDD 300
+ R + +L+K L +K RE+ R+K+QR +A+ GYTN GK++LI A+T
Sbjct: 233 TDRRRIRTEMARLRKELRAMKTAREVKRSKRQRSTIAQIAIAGYTNAGKSSLINAMTGAG 292
Query: 301 SLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADII 360
LV + LFATLD TT L + ++++ DT+GF+ ++PT L+E FK TLE+ + ADI+
Sbjct: 293 VLV-EDALFATLDPTTRRATLADGRQVVFTDTVGFVRHLPTQLVEAFKSTLEEVLAADIM 351
Query: 361 IHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVVGNKVDAVPP-----GERVTE 413
+HVVD S+P L+Q + V++ + + E E+ ++V+ NK+D P V +
Sbjct: 352 LHVVDGSDPFPLKQIEAVNQVIYDIVSETGEQAPPEIIVI-NKIDQADPLVLAELRHVLD 410
Query: 414 EYDLL-ISATRGTGLAQLKEKVQ 435
D++ +SA G G+ +L +V+
Sbjct: 411 HEDVVYVSARTGEGIDELTARVE 433
>gi|255280317|ref|ZP_05344872.1| GTP-binding protein HflX [Bryantella formatexigens DSM 14469]
gi|255269408|gb|EET62613.1| GTP-binding protein HflX [Marvinbryantia formatexigens DSM 14469]
Length = 415
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 171/309 (55%), Gaps = 17/309 (5%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ G+G +E +K Q+ AV D L Q LQ + V DR +I++ IF A
Sbjct: 59 TYIGRGKIEEVK-QMAYALEADAVICD-DELSPAQLHNLQQELDMKVLDRTLIILDIFAA 116
Query: 201 HAKTREARLQIAIAELPYLWTRYRTIEDATN--------MNITKGFLDSKRMVLMEREQK 252
A T E ++Q+ +A+L Y R + ++ + + L+ R ++ +R +
Sbjct: 117 RASTSEGKIQVELAQLKYRQARLVGLRNSLSRLGGGIGTRGPGEKKLEMDRRLIKDRIAQ 176
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
L + L+++K RE+ R+++ RQ+ P A+VGYTN GK+TL+ LT ++ ++LFATL
Sbjct: 177 LNRELSEVKRHREVTRSRRMRQQTPVAAIVGYTNAGKSTLLNTLTGS-QVMEEDKLFATL 235
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT LP+ +L DT+GFI +P L++ F+ TLE+A ADII+HVVD SNP
Sbjct: 236 DPTTRVLELPSGQEMLLTDTVGFIRKLPHHLIDAFRSTLEEAKYADIILHVVDASNPQAE 295
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD---LLISATRGTGLAQ 429
QQ V ETL++L + K V+ + NK D GE + + + +SA G+ L +
Sbjct: 296 QQMAVVYETLENLGVSGKT---VITLFNKQDKTLTGETLRDSRADRVIPVSAKYGSRLEE 352
Query: 430 LKEKVQDMI 438
LK +++++
Sbjct: 353 LKAVLEEIL 361
>gi|397665638|ref|YP_006507175.1| putative GTPase [Legionella pneumophila subsp. pneumophila]
gi|395129049|emb|CCD07271.1| putative GTPase [Legionella pneumophila subsp. pneumophila]
Length = 414
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 182/342 (53%), Gaps = 25/342 (7%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D LAE + L S + V+D + + + D K + GKG E + V + A V
Sbjct: 24 DKALAEFEELALSAKA-EVLDCVLGARATPDAKYYVGKGKAEEIAHLVN---MLDADLVL 79
Query: 168 VD-VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI 226
V+ L Q++ L+ LF V DR +++ IF A+T E +LQ+ +A+L +L TR I
Sbjct: 80 VNHELSPSQERNLERLFGCRVVDRSGLILDIFAQRARTFEGKLQVELAQLQHLSTRL--I 137
Query: 227 EDATNMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
T++ KG L++ R +L ER + + K L K++ R+ R +++
Sbjct: 138 RGWTHLERQKGGIGLRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKASM 197
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
PTV++VGYTN GK+TL LT + + V +QLFATLD T + LP + DT+GFI
Sbjct: 198 PTVSLVGYTNAGKSTLFNVLTGEHTYVA-DQLFATLDPTMRKLELPGSSAAILADTVGFI 256
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++P L+E F+ TLE+ AD+++HV+D+S+P++ + V + L L++ V+
Sbjct: 257 RDLPHHLVEAFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDELKVSNI---PVI 313
Query: 397 VVGNKVDA----VPPGERVTEEYDLLISATRGTGLAQLKEKV 434
V NK+D P + + + +SAT G GL LKE +
Sbjct: 314 QVFNKIDLQEGWQPKIDYTEDACKVWLSATTGAGLDLLKEAI 355
>gi|379715540|ref|YP_005303877.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis 316]
gi|387138835|ref|YP_005694814.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis CIP
52.97]
gi|387140827|ref|YP_005696805.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis
1/06-A]
gi|349735313|gb|AEQ06791.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis CIP
52.97]
gi|355392618|gb|AER69283.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis
1/06-A]
gi|377654246|gb|AFB72595.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis 316]
Length = 546
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 175/341 (51%), Gaps = 25/341 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G VVD D ++ G G + LK V T V L Q
Sbjct: 147 AALAETAGSEVVDMLYQKRDKPDPGTYIGSGKVAELKDIVMSTGVDTVVCDGE--LSPGQ 204
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA------ 229
L+ V V DR M+++ IF HAK++E + Q+++A++ YL TR R A
Sbjct: 205 MIALEKALDVKVIDRTMLILDIFAQHAKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAG 264
Query: 230 --TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
N G +++ R L KL+K + +K RE+ R++++ P +A
Sbjct: 265 GRAGSNGGVGLRGPGETKIEADRRRLRSDMAKLRKEIAGMKTAREVKRSQRRESTIPQIA 324
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+ GYTN GK++LI ALTD LV + LFATLD TT L + +++ DT+GF+ ++P
Sbjct: 325 IAGYTNAGKSSLINALTDAGVLV-EDALFATLDPTTRRAELADGRSVVFTDTVGFVRHLP 383
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVV 398
T L+E F+ TLE+ + AD+++HVVD S+P L+Q + V+ + + EL+ + ++VV
Sbjct: 384 TQLVEAFRSTLEEVVGADLVLHVVDGSDPFPLEQIKAVNGVISDIVRELKVEAPPEIIVV 443
Query: 399 GNKVDAVPPGERVTEEYDL----LISATRGTGLAQLKEKVQ 435
NK+D P + L +SA G G+ +L+ +++
Sbjct: 444 -NKIDQADPLVLAELRHALDDVVFVSAQEGDGIPELEARIE 483
>gi|260578882|ref|ZP_05846787.1| GTP-binding protein [Corynebacterium jeikeium ATCC 43734]
gi|258602972|gb|EEW16244.1| GTP-binding protein [Corynebacterium jeikeium ATCC 43734]
Length = 484
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 169/321 (52%), Gaps = 29/321 (9%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G+G +E LK V T V L Q L+ V V DR M+++ I
Sbjct: 108 DSGTYIGRGKVEELKSVVLETGADTVVCDGE--LSPGQMIALEKALDVKVIDRTMLILDI 165
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HAK++E + Q+++A++ YL TR R A N G +++
Sbjct: 166 FAQHAKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAGGRAGSNGGVGLRGPGETKIEAD 225
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R L KL+K + +K RE+ R ++ P +A+ GYTN GK++LI ALT L
Sbjct: 226 RRRLRSDMAKLRKEIAAMKTSREVKRERRDASAIPQIAIAGYTNAGKSSLINALTGAGVL 285
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V + LFATLD TT L + +++ DT+GF+ ++PT L+E F+ TLE+ + AD+++H
Sbjct: 286 V-EDALFATLDPTTRRANLADGRAVVFSDTVGFVRHLPTQLVEAFRSTLEEVLAADVVLH 344
Query: 363 VVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVVGNKVDAVPP------GERVTEE 414
VVD S+P L+Q + V+ + + E ++ +LV+ NK+DA P R+ +
Sbjct: 345 VVDGSDPFPLEQIKAVNTVIGGIVEESGQEAPPEILVI-NKIDAADPLVLAELRHRIPDA 403
Query: 415 YDLLISATRGTGLAQLKEKVQ 435
+ +SA G G+ +L+ +++
Sbjct: 404 --VYVSAKTGEGIPELEAQLE 422
>gi|326504304|dbj|BAJ90984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/354 (32%), Positives = 181/354 (51%), Gaps = 22/354 (6%)
Query: 98 GKKMKRNTTRDFMLAES-KAL--VSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQ 154
G + KR T +F + ES K L ++ G V+ ST L S + +++ G G + ++
Sbjct: 139 GVECKRATGDNFSIEESLKELEQLADTAGLMVLGSTYQKLSSPNPRTYIGSGKVAEIRSA 198
Query: 155 VRGDARVTAVFVSVDVLKLHQQKMLQDLFQ--VPVFDRYMIVIQIFKAHAKTREARLQIA 212
V+ T +F D L Q + L F V V DR +++ IF A T EA LQ+
Sbjct: 199 VQALDAETIIFD--DELSAGQLRNLDKSFGGGVRVCDRTALILDIFNQRAATHEAALQVT 256
Query: 213 IAELPY-------LWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQRE 265
+A++ Y LWT + + ++ + +L + L+K L ++ R+
Sbjct: 257 LAQMEYQLPRLTKLWTHLERQSGGQVKGMGEKQIEVDKRILRTQISTLRKELESVRKHRK 316
Query: 266 MMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL 325
+ RN++Q P V++VGYTN GK+TL+ LT D L ++LFATLD TT ++ +
Sbjct: 317 LYRNRRQSVPIPVVSLVGYTNAGKSTLLNRLTGADVLA-EDKLFATLDPTTRRVLMKSGT 375
Query: 326 RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL 385
L DT+GFI +PT L+ F+ TLE+ + II+H+VD+S+ QQ VD+ L+ L
Sbjct: 376 EFLLTDTVGFIQKLPTMLVAAFRATLEEISESSIIVHLVDISHQLAQQQIGAVDKVLKEL 435
Query: 386 ELEEKILEHVLVVGNKVDAVPPGERVTEEYD----LLISATRGTGLAQLKEKVQ 435
+++ LVV NK+D RV EE + ISA G GL +L +Q
Sbjct: 436 DIDSV---PKLVVWNKIDNTDNPLRVKEEAAKQGIICISAMNGDGLEELCNAIQ 486
>gi|300781013|ref|ZP_07090867.1| GTP-binding protein HflX [Corynebacterium genitalium ATCC 33030]
gi|300532720|gb|EFK53781.1| GTP-binding protein HflX [Corynebacterium genitalium ATCC 33030]
Length = 505
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 201/398 (50%), Gaps = 56/398 (14%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G + L+ V T V L Q L++ ++ V DR M+++ I
Sbjct: 126 DPGTYVGSGKVSELRDIVHATGADTVVCDGG--LSPGQLVALEEALKIKVIDRTMLILDI 183
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------------LD 240
F HAK++E + Q+++A++ YL+TR R N++ G ++
Sbjct: 184 FAQHAKSKEGKAQVSLAQMEYLYTRTRGW--GGNLSRQAGGRAGSNGGVGLRGPGETRIE 241
Query: 241 SKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDD 300
+ R L KL++ L+ +K R++ R ++QR P +A+ GYTN GK++LI A+TD
Sbjct: 242 ADRRRLRTDMAKLRRDLSGMKTARDIKRAQRQRSTLPKIAIAGYTNAGKSSLINAMTDAG 301
Query: 301 SLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADII 360
LV + LFATLD +T L + ++ DT+GF+ ++PT L+E FK TLE+ + AD++
Sbjct: 302 VLV-EDALFATLDPSTRRAELADGRTVVLTDTVGFVRHLPTQLVEAFKSTLEEVVGADLM 360
Query: 361 IHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVVGNKVDAVPP--------GER 410
+HVVD S+P L+Q + V++ L + + E+I ++VV NK+D P
Sbjct: 361 LHVVDGSDPFPLKQIKAVNDVLAEITRDTGEEIPPEIIVV-NKIDEADPVVLAELRHAFA 419
Query: 411 VTEEYDLLISATRGTGLAQLKEKVQDM---------ILKATGRKNITMRVRSGGSEYQWL 461
++ + +SA G G+ +L+ +++ +L R ++ RV G+
Sbjct: 420 DSKHNVVFVSAVTGEGIDELEGRIEMFLNTLDAHVKLLVPFTRGDVVSRVHEEGT----- 474
Query: 462 MKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFI 499
+R ++ + E L+DV + V+ ++ EF+
Sbjct: 475 --------VRSEEYNEEGTLIDVRLPRVLAEQYA-EFV 503
>gi|254486973|ref|ZP_05100178.1| GTP-binding proten HflX [Roseobacter sp. GAI101]
gi|214043842|gb|EEB84480.1| GTP-binding proten HflX [Roseobacter sp. GAI101]
Length = 412
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 186/362 (51%), Gaps = 26/362 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
V + ++ L + FG G +E LK++ A V V V V + QQ+ L+ + V
Sbjct: 34 VTGADVVPLRTVSAGMLFGSGKIEELKQKFEA-AEVELVLVDGAVTPV-QQRNLEKAWGV 91
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
+ DR ++++IF A TRE LQ+ +A L Y R R + T++ +G
Sbjct: 92 KLLDRTGLILEIFSDRAATREGVLQVEMAALNY--QRTRLVRAWTHLERQRGGLGFVGGP 149
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
++S R + E+ +L++ L+K+ R + R + + +P VA+VGYTN GK+TL
Sbjct: 150 GETQIESDRRAIDEQLVRLRRQLDKVVKTRALHRAARAKVPYPIVALVGYTNAGKSTLFN 209
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT D ++ ++ LFATLD T +LP+ I+ DT+GFIS++PT L+ F+ TLE+
Sbjct: 210 RLTGAD-VMAKDMLFATLDPTMRSLVLPDGPEIILSDTVGFISDLPTELVAAFRATLEEV 268
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE----R 410
+ ADII HV D+S+ + +Q Q+V + L L + ++ V NK+D + P R
Sbjct: 269 LAADIICHVRDISHAETEEQAQNVRDILASLGVPKET--RSFEVWNKLDLLAPDRADAVR 326
Query: 411 VTEEYD---LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
E D L ISA G GL Q++ + + + ++ + G + WL + V
Sbjct: 327 ARAERDPNVLAISAITGEGLEQMQSVIAEALQGVVREADLVLGY-DQGKKRAWLFEQEVV 385
Query: 468 SN 469
N
Sbjct: 386 LN 387
>gi|326510903|dbj|BAJ91799.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/354 (32%), Positives = 181/354 (51%), Gaps = 22/354 (6%)
Query: 98 GKKMKRNTTRDFMLAES-KAL--VSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQ 154
G + KR T +F + ES K L ++ G V+ ST L S + +++ G G + ++
Sbjct: 139 GVECKRATGDNFSIEESLKELEQLADTAGLMVLGSTYQKLSSPNPRTYIGSGKVAEIRSA 198
Query: 155 VRGDARVTAVFVSVDVLKLHQQKMLQDLFQ--VPVFDRYMIVIQIFKAHAKTREARLQIA 212
V+ T +F D L Q + L F V V DR +++ IF A T EA LQ+
Sbjct: 199 VQALDAETIIFD--DELSAGQLRNLDKSFGGGVRVCDRTALILDIFNQRAATHEAALQVT 256
Query: 213 IAELPY-------LWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQRE 265
+A++ Y LWT + + ++ + +L + L+K L ++ R+
Sbjct: 257 LAQMEYQLPRLTKLWTHLERQSGGQVKGMGEKQIEVDKRILRTQISTLRKELESVRKHRK 316
Query: 266 MMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL 325
+ RN++Q P V++VGYTN GK+TL+ LT D L ++LFATLD TT ++ +
Sbjct: 317 LYRNRRQSVPIPVVSLVGYTNAGKSTLLNRLTGADVLA-EDKLFATLDPTTRRVLMKSGT 375
Query: 326 RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL 385
L DT+GFI +PT L+ F+ TLE+ + II+H+VD+S+ QQ VD+ L+ L
Sbjct: 376 EFLLTDTVGFIQKLPTMLVAAFRATLEEISESSIIVHLVDISHQLAQQQIGAVDKVLKEL 435
Query: 386 ELEEKILEHVLVVGNKVDAVPPGERVTEEYD----LLISATRGTGLAQLKEKVQ 435
+++ LVV NK+D RV EE + ISA G GL +L +Q
Sbjct: 436 DIDSV---PKLVVWNKIDNTDNPLRVKEEAAKQGIICISAMNGDGLEELCNAIQ 486
>gi|423083883|ref|ZP_17072411.1| GTP-binding protein HflX [Clostridium difficile 002-P50-2011]
gi|423087419|ref|ZP_17075807.1| GTP-binding protein HflX [Clostridium difficile 050-P50-2011]
gi|357543681|gb|EHJ25696.1| GTP-binding protein HflX [Clostridium difficile 002-P50-2011]
gi|357544837|gb|EHJ26824.1| GTP-binding protein HflX [Clostridium difficile 050-P50-2011]
Length = 425
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 207/419 (49%), Gaps = 41/419 (9%)
Query: 104 NTTRDF--MLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARV 161
N + DF ++ E + L S+ VV S + ++ + G G +E L ++ +
Sbjct: 16 NKSEDFNELMIELENLCSACD-IDVVGSITQNAKQVNRAFYIGTGKVEELLNLIKKENIE 74
Query: 162 TAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWT 221
+F + L Q K L++ + DR +++ IF AKTREA+LQ+ +A L Y+
Sbjct: 75 IVIFY--NELSTSQLKNLEEKLNCEIIDRTALILDIFAQRAKTREAKLQVEVASLKYMLP 132
Query: 222 RYRTIEDATNMNITKGFLDSK------------RMVLMEREQKLKKALNKLKGQREMMRN 269
R I N+ G + +K R + E+ L K L+ LK QRE R+
Sbjct: 133 RL--IGSNENLGRQSGGVGTKNRGSGEKKLELDRRRIEEKITSLNKELDDLKFQRETQRS 190
Query: 270 KKQRQKFPTVAVVGYTNCGKTTLIKALTD------DDSLVPRNQLFATLDVTTHEGMLPN 323
+++ P VA+VGYTN GK++++ L D + + +N LFATL+ + +L N
Sbjct: 191 MRRKSNLPNVALVGYTNAGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLTN 250
Query: 324 RLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQ 383
L DT+GF+SN+P L++ F+ TLE+A AD+++HV+D+SNP Y + ++TL+
Sbjct: 251 NKEFLLSDTVGFVSNLPHDLVKAFRSTLEEACEADVLLHVIDISNPSYKSHIKVTEDTLK 310
Query: 384 HLELEEKILEHVLVVGNKVDA--VPPGERVTEEYD---LLISATRGTGLAQLKEKVQDMI 438
+ + + HV NK+D V +++ + D L +S + + ++ + + D I
Sbjct: 311 QIGADGIPMIHVY---NKIDLIDVEVLDKILDSIDKEGLFVSVKKDINIDKMIKCICDSI 367
Query: 439 LKATGRKNITMRVRSGGSEYQWLMKHTAVSNI--REDDTSAEHLLLDVVMTDVIMNKFK 495
K R + G + ++T+V N RED LLDV +++ NK+K
Sbjct: 368 FKDYVRCKFLIPYDKGHVA-SYFNENTSVINTEYREDGA-----LLDVECSNIEYNKYK 420
>gi|300858660|ref|YP_003783643.1| GTPase [Corynebacterium pseudotuberculosis FRC41]
gi|383314422|ref|YP_005375277.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis
P54B96]
gi|384504841|ref|YP_005681511.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis 1002]
gi|384506936|ref|YP_005683605.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis C231]
gi|384509023|ref|YP_005685691.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis I19]
gi|384511115|ref|YP_005690693.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis PAT10]
gi|385807723|ref|YP_005844120.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis 267]
gi|387136764|ref|YP_005692744.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis
42/02-A]
gi|300686114|gb|ADK29036.1| GTPase [Corynebacterium pseudotuberculosis FRC41]
gi|302206368|gb|ADL10710.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis C231]
gi|302330924|gb|ADL21118.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis 1002]
gi|308276610|gb|ADO26509.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis I19]
gi|341825054|gb|AEK92575.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis PAT10]
gi|348607209|gb|AEP70482.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis
42/02-A]
gi|380869923|gb|AFF22397.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis
P54B96]
gi|383805116|gb|AFH52195.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis 267]
Length = 546
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 175/341 (51%), Gaps = 25/341 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G VVD D ++ G G + LK V T V L Q
Sbjct: 147 AALAETAGSEVVDMLYQKRDKPDPGTYIGSGKVAELKDIVMSTGVDTVVCDGE--LSPGQ 204
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA------ 229
L+ V V DR M+++ IF HAK++E + Q+++A++ YL TR R A
Sbjct: 205 MIALEKALDVKVIDRTMLILDIFAQHAKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAG 264
Query: 230 --TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
N G +++ R L KL+K + +K RE+ R++++ P +A
Sbjct: 265 ERAGSNGGVGLRGPGETKIEADRRRLRSDMAKLRKEIAGMKTAREVKRSQRRESTIPQIA 324
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+ GYTN GK++LI ALTD LV + LFATLD TT L + +++ DT+GF+ ++P
Sbjct: 325 IAGYTNAGKSSLINALTDAGVLV-EDALFATLDPTTRRAELADGRSVVFTDTVGFVRHLP 383
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVV 398
T L+E F+ TLE+ + AD+++HVVD S+P L+Q + V+ + + EL+ + ++VV
Sbjct: 384 TQLVEAFRSTLEEVVGADLVLHVVDGSDPFPLEQIKAVNGVISDIVRELKVEAPPEIIVV 443
Query: 399 GNKVDAVPPGERVTEEYDL----LISATRGTGLAQLKEKVQ 435
NK+D P + L +SA G G+ +L+ +++
Sbjct: 444 -NKIDQADPLVLAELRHALDDVVFVSAQEGDGIPELEARIE 483
>gi|148358150|ref|YP_001249357.1| GTP binding protein HflX [Legionella pneumophila str. Corby]
gi|296105508|ref|YP_003617208.1| GTPase [Legionella pneumophila 2300/99 Alcoy]
gi|148279923|gb|ABQ54011.1| GTP binding protein HflX [Legionella pneumophila str. Corby]
gi|295647409|gb|ADG23256.1| GTPase [Legionella pneumophila 2300/99 Alcoy]
Length = 414
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 182/342 (53%), Gaps = 25/342 (7%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D LAE + L S + V+D + + + D K + GKG E + V + A V
Sbjct: 24 DKALAEFEELALSAKA-EVLDCVLGARATPDAKYYVGKGKAEEIAHLVN---MLDADLVL 79
Query: 168 VD-VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI 226
V+ L Q++ L+ LF V DR +++ IF A+T E +LQ+ +A+L +L TR I
Sbjct: 80 VNHELSPSQERNLERLFGCRVVDRSGLILDIFAQRARTFEGKLQVELAQLQHLSTRL--I 137
Query: 227 EDATNMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
T++ KG L++ R +L ER + + K L K++ R+ R +++
Sbjct: 138 RGWTHLERQKGGIGLRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKASM 197
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
PTV++VGYTN GK+TL LT + + V +QLFATLD T + LP + DT+GFI
Sbjct: 198 PTVSLVGYTNAGKSTLFNVLTGEHTYVA-DQLFATLDPTMRKLELPGSSAAILADTVGFI 256
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++P L+E F+ TLE+ AD+++HV+D+S+P++ + V + L L++ V+
Sbjct: 257 RDLPHHLVEAFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDELKVSNI---PVI 313
Query: 397 VVGNKVDA----VPPGERVTEEYDLLISATRGTGLAQLKEKV 434
V NK+D P + + + +SAT G GL LKE +
Sbjct: 314 QVFNKIDLQEGWQPKIDYTEDACKVWLSATTGAGLDLLKEAI 355
>gi|402312839|ref|ZP_10831762.1| GTP-binding protein HflX [Lachnospiraceae bacterium ICM7]
gi|400367415|gb|EJP20431.1| GTP-binding protein HflX [Lachnospiraceae bacterium ICM7]
Length = 415
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 176/330 (53%), Gaps = 18/330 (5%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V+DS I S ++ GKG +E +K +V + T V V D L Q + L+DL
Sbjct: 39 GATVLDSIIQSRERMHPGTYIGKGKIEEVKDRVI-ELGATGV-VCDDELTPAQLRNLEDL 96
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNI 234
V DR M+++ IF A T E ++Q+ +A+L + R R
Sbjct: 97 LDTKVMDRTMVILDIFAKRATTSEGKIQVELAQLKFSSARLVGLRSSLSRLGGGIGTRGP 156
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ L+ R ++ ER +LK L K++ R+++R + VA+VGYTN GK+TL+
Sbjct: 157 GEKKLEMDRRLIHERISQLKAELKKVENHRDLIRKSRDENLAFNVAIVGYTNAGKSTLLN 216
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LTD + ++ ++LFATLD TT + L + IL DT+GFI +P L+E FK TLE+A
Sbjct: 217 KLTDAN-ILAEDKLFATLDPTTRKLKLGSGQEILVTDTVGFIRKLPHHLIEAFKSTLEEA 275
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEE 414
A+++IH+VD SN + Q V +TL+ L++ +K ++ V NK D + + +
Sbjct: 276 KYANLLIHMVDASNEEASSQMLVVYDTLRSLDVVDK---DIITVFNKTDLMEENMELPRD 332
Query: 415 YD----LLISATRGTGLAQLKEKVQDMILK 440
+ L +SA G G+ LK+ V+D++ K
Sbjct: 333 FHADKVLKMSAKTGEGIEDLKKTVEDILQK 362
>gi|297621460|ref|YP_003709597.1| GTP-binding protein [Waddlia chondrophila WSU 86-1044]
gi|297376761|gb|ADI38591.1| GTP-binding protein [Waddlia chondrophila WSU 86-1044]
gi|337293719|emb|CCB91706.1| GTP-binding protein hflX [Waddlia chondrophila 2032/99]
Length = 434
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 146/252 (57%), Gaps = 16/252 (6%)
Query: 164 VFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY 223
V V D + QQ+ L+ ++ +PV DR ++I +F A ++EA+LQ+ +A L YL R
Sbjct: 89 VIVFDDEVTPGQQRNLEKIYSIPVIDRSEVIIGVFAQRAHSKEAKLQVELARLKYLAPRL 148
Query: 224 RTI-EDATNMNITKG---FLDSK--------RMVLMEREQKLKKALNKLKGQREMMRNKK 271
+ + + T G +L K R +L + L+K +N ++ R+ R ++
Sbjct: 149 KRMWTHLSRQQATAGGGAYLKGKGEKQIEIDRRLLKTKIFHLQKEINAVQAHRDTQRIQR 208
Query: 272 QRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVD 331
+R + PT A+VGYTN GK+TL+ ALT+ + ++LFATLD TT + LPN IL D
Sbjct: 209 ERSEIPTFAIVGYTNAGKSTLLNALTEA-GIFTEDKLFATLDTTTRKFTLPNNQEILLTD 267
Query: 332 TIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKI 391
T+GFI +P L+ F+ TLE+A+ ADI+IH++D S+P L+Q + E L L ++K
Sbjct: 268 TVGFIRKLPHLLVAAFRSTLEEAVQADILIHLIDSSHPMALEQAEATVEVLHELGAKDK- 326
Query: 392 LEHVLVVGNKVD 403
V+ V NK+D
Sbjct: 327 --PVITVLNKID 336
>gi|163849524|ref|YP_001637567.1| GTP-binding proten HflX [Methylobacterium extorquens PA1]
gi|163661129|gb|ABY28496.1| GTP-binding proten HflX [Methylobacterium extorquens PA1]
Length = 474
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 199/405 (49%), Gaps = 37/405 (9%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VV + ++L ++ GKG +E + ++ A + V L QQ+ L+ +
Sbjct: 73 VVQAIPLNLPKIRPSTYLGKGRVEEIAGLIK--ALEIGLVVMDCALSPVQQRNLEKAWSA 130
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
V DR ++++IF A TRE LQ+ A L Y + R + T++ +G
Sbjct: 131 KVIDRTGLILEIFGRRASTREGTLQVEHAHLAY--QKSRLVRSWTHLERQRGGFGFLGGP 188
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+++ R ++ ER ++++ L+ + R + R + R +P VA+VGYTN GK+TL
Sbjct: 189 GETQIEADRRIIQERMTRIERDLDAVTRTRGLHRKSRARVPYPIVALVGYTNAGKSTLFN 248
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
ALT+ +V ++ LFATLD T LP+ ++ DT+GFIS++PT L+ F+ TLED
Sbjct: 249 ALTEA-QVVAQDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTALIAAFRATLEDV 307
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER---- 410
+ ADI++HV D+S+ D Q + V L L + + ++ V NK D + ER
Sbjct: 308 IEADILLHVRDISHADTEAQAEDVGHVLDELGIRSHA-DRIIEVWNKADVLDKAERTRLL 366
Query: 411 ---------VTEEYD----LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSE 457
++D +L+SA G GL+ L +++ I ++ + + G++
Sbjct: 367 NLSSKGEGQTRNDHDSSAPVLVSALTGEGLSALTSRIEARIARSRSTFAVVLPPED-GAQ 425
Query: 458 YQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSR 502
WL ++ V + RE+ HL + V +F + F +R
Sbjct: 426 LHWLYENAEVLDRREEVNGTLHLAVRVAPEK--EPRFHNRFAGAR 468
>gi|380301964|ref|ZP_09851657.1| GTP-binding proten HflX [Brachybacterium squillarum M-6-3]
Length = 520
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 173/348 (49%), Gaps = 32/348 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D + D +F G+G L V V A V D L
Sbjct: 128 AALAETAGSEVLDGVMQRRAHPDPATFLGRGKAAELAEIV---TEVGADTVIADGELAPS 184
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ V V DR +++ IF HAK+RE + Q+ +A+L YL R R D+ +
Sbjct: 185 QRRALEDIVTVKVVDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGDSMSRQA 244
Query: 235 ------------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
TK LD +R + +R KL++ + + RE R + R
Sbjct: 245 GGRVAAGGAGMGSRGPGETKIELDRRR--IRDRMAKLRREIKAMTPGREAKRADRHRNAV 302
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P+VA+ GYTN GK++L+ LT LV N LFATLD T P+ + DT+GF+
Sbjct: 303 PSVAIAGYTNAGKSSLLNRLTGAGVLV-ENALFATLDPTVRRSTTPDGREFTFADTVGFV 361
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++PT L+E F+ TLE+ AD+++HVVD S+PD Q + V L +E E + E +
Sbjct: 362 RHLPTQLVEAFRSTLEEVGDADLVLHVVDASHPDPEGQIRAVRTVLGEIEGFE-VPE--I 418
Query: 397 VVGNKVDAVPPG--ERVTEEYD--LLISATRGTGLAQLKEKVQDMILK 440
VV NK D P R+ + ++SA G G+ +L+ ++ + + +
Sbjct: 419 VVLNKADLATPETLARIRSQVGEHAVVSARTGEGIEELRRQIAEHLPR 466
>gi|86138349|ref|ZP_01056923.1| GTP-binding protein HflX [Roseobacter sp. MED193]
gi|85824874|gb|EAQ45075.1| GTP-binding protein HflX [Roseobacter sp. MED193]
Length = 423
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 203/407 (49%), Gaps = 37/407 (9%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
LAE AL ++ VV ST++ L FG G +E LK + + V V + V
Sbjct: 30 LAEGVALAEALPDLDVVGSTVVRLPKAHAGMLFGSGKIEELKDLLHSN-EVDLVLIDGPV 88
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
+ QQ+ L+ ++V + DR ++++IF A+TRE LQ+ +A L Y R R + T
Sbjct: 89 SPV-QQRNLEKAWKVKILDRTGLILEIFSDRARTREGVLQVEMAALSY--QRTRLVRAWT 145
Query: 231 NMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +G +++ R + ++ L++ L K+ R + R + + FP V
Sbjct: 146 HLERQRGGLGFVGGPGETQIEADRRAIDDQLVNLRRQLAKVVKTRSLHRAARAKIPFPIV 205
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL LT + ++ ++ LFATLD T +P+ I+ DT+GFIS++
Sbjct: 206 ALVGYTNAGKSTLFNRLTGAE-VMAKDMLFATLDPTMRRVEMPDGPEIILSDTVGFISDL 264
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+ F+ TLE+ + AD+I+HV D+S+ D Q V L L ++E + + V
Sbjct: 265 PTELVAAFRATLEEVLAADVILHVRDISHEDSQNQANDVAAILSTLGVDETRAQ--IEVW 322
Query: 400 NKVDAVPPGERVTEEYDLL---------ISATRGTGLAQLKEKVQDMILKATGRKNITMR 450
NK+D +P E V E ISA G G+ L + D+ LK G +++
Sbjct: 323 NKLDQLP--EDVAEARRQRAAREEGIHAISALTGEGIEAL---LDDVALKLEGVRHVEEF 377
Query: 451 VRS--GGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFK 495
S G E WL + V+N ++ E L V TD +FK
Sbjct: 378 TLSFAQGKERAWLFQQDVVTN---EEQGEEGFALTVRWTDKQKAQFK 421
>gi|398821352|ref|ZP_10579819.1| GTP-binding protein HflX [Bradyrhizobium sp. YR681]
gi|398227980|gb|EJN14135.1| GTP-binding protein HflX [Bradyrhizobium sp. YR681]
Length = 459
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 221/464 (47%), Gaps = 48/464 (10%)
Query: 66 ESDEFKTIRDEAQTGALGTDHQVFVVQPFIKW-----GKKMKRNTTRDF--MLAESKALV 118
E F D ++ +V V+ P+++ + + + RD L E+ L
Sbjct: 2 EPRNFDGEADRPRSAGAKQTGRVLVIGPYLRARAGSADAQSESHVQRDAEARLDEAAGLA 61
Query: 119 SSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQK 177
+I + D+ I + ++ GKG +E + + + A V +D L QQ+
Sbjct: 62 RAID-LVIADAIIAPISQIRPATYIGKGKVEEIAALAKS---LDAELVVMDCALAPIQQR 117
Query: 178 MLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKG 237
L+ Q V DR ++++IF AKT+E LQ+ +A L Y R R + T++ +G
Sbjct: 118 NLEKELQAKVLDRTGLILEIFGRRAKTKEGSLQVELAHLNY--QRSRLVRSWTHLERQRG 175
Query: 238 F-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTN 286
+++ R ++ ER KL+ L K++ R + R +QR + VA+VGYTN
Sbjct: 176 GFGFMGGPGETQIEADRRLIQERISKLEGELKKVQATRRLHRAGRQRVPYRVVALVGYTN 235
Query: 287 CGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEP 346
GK+TL LT D + + LFATLD T LP+ + + DT+GFISN+PT L+
Sbjct: 236 AGKSTLFNRLTRAD-VQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQLVAA 294
Query: 347 FKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP 406
F+ TLE+ + AD+I+HV D+S+ D Q+ VD L+ L + ++ V NK+D
Sbjct: 295 FRATLEEVLEADVILHVRDISHEDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKIDRYD 354
Query: 407 ----------PGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG-G 455
R + +L+SA G G+ L +++ + A R + + + + G
Sbjct: 355 AEQREELLNIAARRPEDHPAMLVSAVTGEGVDALLAAIEERL--AAKRTTLDLSIDAADG 412
Query: 456 SEYQWLMKHTAV-----SNIREDDTSAEHLLLDVVMTDVIMNKF 494
+ WL +++ V + R D T + +D D+++N+F
Sbjct: 413 AGISWLHRNSEVLVKELHDGRFDMT----VRVDETKRDIVVNRF 452
>gi|398331906|ref|ZP_10516611.1| GTPase [Leptospira alexanderi serovar Manhao 3 str. L 60]
Length = 612
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 160/290 (55%), Gaps = 22/290 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VVD+ I D + GKG LE + ++ + + V L Q K + D+ +
Sbjct: 248 VVDTFIQRKNRLDPSTVLGKGKLEEI--ILKAIQKHVELLVFDLELTPSQAKKISDIADI 305
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN----------IT 235
V DR +++ IF +AK+R+ +LQ+ +A+L YL R ++D NM+
Sbjct: 306 KVIDRTQLILDIFARNAKSRDGKLQVELAQLKYLKGRLTELDD--NMSRLTGGIGGRGPG 363
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ + + ER +L+ L L+ +RE+ R +++R + P V +VGYTN GK+T + A
Sbjct: 364 ETKLEIGKRRVEERITRLEVELKSLRKRREINRRQRKRNELPAVGIVGYTNAGKSTFLNA 423
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT+ + L N+LFATLD TT P I+ DT+GFI ++P L FK TLE+
Sbjct: 424 LTNSEVL-SENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPELSNAFKATLEELG 482
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV--LVVGNKVD 403
+D+++HVVDVSNPDY Q + V++ L+ LE L H+ + V NK+D
Sbjct: 483 DSDLLVHVVDVSNPDYKLQMEAVEKILEELE-----LSHIPMIQVFNKID 527
>gi|392400773|ref|YP_006437373.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis Cp162]
gi|390531851|gb|AFM07580.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis Cp162]
Length = 539
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 175/341 (51%), Gaps = 25/341 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G VVD D ++ G G + LK V T V L Q
Sbjct: 140 AALAETAGSEVVDMLYQKRDKPDPGTYIGSGKVAELKDIVMSTGVDTVVCDGE--LSPGQ 197
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA------ 229
L+ V V DR M+++ IF HAK++E + Q+++A++ YL TR R A
Sbjct: 198 MIALEKALDVKVIDRTMLILDIFAQHAKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAG 257
Query: 230 --TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
N G +++ R L KL+K + +K RE+ R++++ P +A
Sbjct: 258 GRAGSNGGVGLRGPGETKIEADRRRLRSDMAKLRKEIAGMKTAREVKRSQRRESTIPQIA 317
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+ GYTN GK++LI ALTD LV + LFATLD TT L + +++ DT+GF+ ++P
Sbjct: 318 IAGYTNAGKSSLINALTDAGVLV-EDALFATLDPTTRRAELADGRSVVFTDTVGFVRHLP 376
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVV 398
T L+E F+ TLE+ + AD+++HVVD S+P L+Q + V+ + + EL+ + ++VV
Sbjct: 377 TQLVEAFRSTLEEVVGADLVLHVVDGSDPFPLEQIKAVNGVISDIVRELKVEAPPEIIVV 436
Query: 399 GNKVDAVPPGERVTEEYDL----LISATRGTGLAQLKEKVQ 435
NK+D P + L +SA G G+ +L+ +++
Sbjct: 437 -NKIDQADPLVLAELRHALDDVVFVSAQEGDGIPELEARIE 476
>gi|237802803|ref|YP_002887997.1| putative nucleotide-binding protein [Chlamydia trachomatis
B/Jali20/OT]
gi|237804725|ref|YP_002888879.1| putative nucleotide-binding protein [Chlamydia trachomatis
B/TZ1A828/OT]
gi|376282384|ref|YP_005156210.1| putative nucleotide-binding protein [Chlamydia trachomatis A2497]
gi|385270068|ref|YP_005813228.1| GTP-binding protein [Chlamydia trachomatis A2497]
gi|231273025|emb|CAX09938.1| putative nucleotide-binding protein [Chlamydia trachomatis
B/TZ1A828/OT]
gi|231274037|emb|CAX10831.1| putative nucleotide-binding protein [Chlamydia trachomatis
B/Jali20/OT]
gi|347975208|gb|AEP35229.1| HflX [Chlamydia trachomatis A2497]
gi|371908414|emb|CAX09044.1| putative nucleotide-binding protein [Chlamydia trachomatis A2497]
gi|438690308|emb|CCP49565.1| GTPase HflX [Chlamydia trachomatis A/7249]
gi|438691392|emb|CCP48666.1| GTPase HflX [Chlamydia trachomatis A/5291]
gi|438692765|emb|CCP47767.1| GTPase HflX [Chlamydia trachomatis A/363]
Length = 447
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 152/281 (54%), Gaps = 21/281 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ +V V DR ++++IF + A T EA LQ+ +A+ YL R + +
Sbjct: 113 QQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLPRLKRMWGHLSRQK 172
Query: 227 EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
+ KG ++ R ++ ER KL + L ++ QRE R K+R + PT A++
Sbjct: 173 SGGSGGGFVKGEGEKQIELDRRIVRERIHKLSRDLKNVERQREERRKAKKRNQIPTFALI 232
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ LT D+ N+LFATLD T +LP R+L DT+GFI +P T
Sbjct: 233 GYTNSGKSTLLNLLTSADTYA-ENKLFATLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHT 291
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+ FK TLE A+ DI++HVVD S+P L+ + LQ L + + V+ V NK+
Sbjct: 292 LVAAFKSTLEAALQEDILLHVVDASHPLVLEHVETTKAILQELGITQP---QVITVLNKM 348
Query: 403 DAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMI 438
D V G R+ + +SA G G+ +L ++DM+
Sbjct: 349 DKVADGVTASRLRLMSPNPVCVSAKTGEGIRELLRSMEDMV 389
>gi|166154589|ref|YP_001654707.1| putative nucleotide-binding protein [Chlamydia trachomatis 434/Bu]
gi|166155464|ref|YP_001653719.1| putative nucleotide-binding protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335856|ref|ZP_07224100.1| putative nucleotide-binding protein [Chlamydia trachomatis L2tet1]
gi|339626051|ref|YP_004717530.1| GTP-binding protein HflX [Chlamydia trachomatis L2c]
gi|165930577|emb|CAP04074.1| putative nucleotide-binding protein [Chlamydia trachomatis 434/Bu]
gi|165931452|emb|CAP07028.1| putative nucleotide-binding protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|339461357|gb|AEJ77860.1| GTP-binding protein HflX [Chlamydia trachomatis L2c]
gi|440526184|emb|CCP51668.1| GTPase HflX [Chlamydia trachomatis L2b/8200/07]
gi|440536009|emb|CCP61522.1| GTPase HflX [Chlamydia trachomatis L2b/795]
gi|440537791|emb|CCP63305.1| GTPase HflX [Chlamydia trachomatis L1/1322/p2]
gi|440540461|emb|CCP65975.1| GTPase HflX [Chlamydia trachomatis L2/25667R]
gi|440542237|emb|CCP67751.1| GTPase HflX [Chlamydia trachomatis L2b/UCH-2]
gi|440543128|emb|CCP68642.1| GTPase HflX [Chlamydia trachomatis L2b/Canada2]
gi|440544019|emb|CCP69533.1| GTPase HflX [Chlamydia trachomatis L2b/LST]
gi|440544909|emb|CCP70423.1| GTPase HflX [Chlamydia trachomatis L2b/Ams1]
gi|440545799|emb|CCP71313.1| GTPase HflX [Chlamydia trachomatis L2b/CV204]
gi|440914061|emb|CCP90478.1| GTPase HflX [Chlamydia trachomatis L2b/Ams2]
gi|440914951|emb|CCP91368.1| GTPase HflX [Chlamydia trachomatis L2b/Ams3]
gi|440915843|emb|CCP92260.1| GTPase HflX [Chlamydia trachomatis L2b/Canada1]
gi|440916737|emb|CCP93154.1| GTPase HflX [Chlamydia trachomatis L2b/Ams4]
gi|440917627|emb|CCP94044.1| GTPase HflX [Chlamydia trachomatis L2b/Ams5]
Length = 447
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 152/281 (54%), Gaps = 21/281 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ +V V DR ++++IF + A T EA LQ+ +A+ YL R + +
Sbjct: 113 QQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLPRLKRMWGHLSRQK 172
Query: 227 EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
+ KG ++ R ++ ER KL + L ++ QRE R K+R + PT A++
Sbjct: 173 SGGSGGGFVKGEGEKQIELDRRIVRERIHKLSRDLKNVERQREERRKAKKRNQIPTFALI 232
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ LT D+ N+LFATLD T +LP R+L DT+GFI +P T
Sbjct: 233 GYTNSGKSTLLNLLTSADTYA-ENKLFATLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHT 291
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+ FK TLE A+ DI++HVVD S+P L+ + LQ L + + V+ V NK+
Sbjct: 292 LVAAFKSTLEAALQEDILLHVVDASHPLALEHVETTKAILQELGITQP---QVITVLNKM 348
Query: 403 DAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMI 438
D V G R+ + +SA G G+ +L ++DM+
Sbjct: 349 DKVADGVTASRLRLMSPNPVCVSAKTGEGIRELLRSMEDMV 389
>gi|76789109|ref|YP_328195.1| GTP-binding protein [Chlamydia trachomatis A/HAR-13]
gi|76167639|gb|AAX50647.1| HflX [Chlamydia trachomatis A/HAR-13]
Length = 447
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 152/281 (54%), Gaps = 21/281 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ +V V DR ++++IF + A T EA LQ+ +A+ YL R + +
Sbjct: 113 QQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLPRLKRMWGHLSRQK 172
Query: 227 EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
+ KG ++ R ++ ER KL + L ++ QRE R K+R + PT A++
Sbjct: 173 SGGSGGGFVKGEGEKQIELDRRIVRERIHKLSRDLKNVERQREERRKAKKRNQIPTFALI 232
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ LT D+ N+LFATLD T +LP R+L DT+GFI +P T
Sbjct: 233 GYTNSGKSTLLNLLTSADTYA-ENKLFATLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHT 291
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+ FK TLE A+ DI++HVVD S+P L+ + LQ L + + V+ V NK+
Sbjct: 292 LVAAFKSTLEAALQEDILLHVVDASHPLVLEHVETTKAILQELGITQP---QVITVLNKM 348
Query: 403 DAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMI 438
D V G R+ + +SA G G+ +L ++DM+
Sbjct: 349 DKVADGVTASRLRLMSPNPVCVSAKTGEGIRELLRSMEDMV 389
>gi|21674206|ref|NP_662271.1| GTP-binding protein HflX [Chlorobium tepidum TLS]
gi|21647370|gb|AAM72613.1| GTP-binding protein HflX [Chlorobium tepidum TLS]
Length = 441
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 184/369 (49%), Gaps = 31/369 (8%)
Query: 117 LVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQ 176
++ G V+ S I D + G G E L V D+ +F D L Q
Sbjct: 38 FLADTAGADVITSIIQEKKQPDPATCIGSGKAEDLAGLVEADSIDIVIFD--DDLTPVQV 95
Query: 177 KMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITK 236
+ L+ + + V DR +++QIF AK+ +AR Q+ +A+L YL R T+++ K
Sbjct: 96 RNLERILKCKVIDRTGLILQIFAIRAKSAQARTQVELAQLEYLLPRLSGA--WTHLSKQK 153
Query: 237 GFLDSK----------RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTN 286
G + +K R ++ R LKK L + Q + + R P VA+VGYTN
Sbjct: 154 GGIGTKGPGETQIETDRRLVRNRIASLKKKLRAVSLQHDT--QTRGRAAVPRVALVGYTN 211
Query: 287 CGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEP 346
GK+TL+ AL + N+LFATLD T L +L DT+GFI +P TL+E
Sbjct: 212 AGKSTLMNALCPEAGAYAENRLFATLDTKTRRLELKINKLVLLSDTVGFIRKLPHTLVES 271
Query: 347 FKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD--- 403
FK TL++ + AD ++HV+DVS+P + + Q V ETL+ + ++ +H++ V NK+D
Sbjct: 272 FKSTLDEVLQADFLLHVIDVSHPGFEEHMQVVRETLKEIGVKH---DHIIEVFNKIDALD 328
Query: 404 --AVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQ-- 459
A+ G R + ISA RG L+ LKE + + + R T +V++ S Y+
Sbjct: 329 DPAILTGLRGKYPDAVFISAVRGLNLSALKETIANYV----ARDYKTRKVKTHVSNYKLI 384
Query: 460 -WLMKHTAV 467
+L H V
Sbjct: 385 GYLYDHAEV 393
>gi|410939090|ref|ZP_11370928.1| GTP-binding protein HflX [Leptospira noguchii str. 2006001870]
gi|410785804|gb|EKR74757.1| GTP-binding protein HflX [Leptospira noguchii str. 2006001870]
Length = 522
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 158/288 (54%), Gaps = 18/288 (6%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VVD+ I D + GKG LE + ++ + + V L Q K + D+ +
Sbjct: 157 VVDTFIQRKNRLDPSTVLGKGKLEEI--ILKAIQKHVELLVFDLELTPSQAKKISDIADI 214
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN----------IT 235
V DR +++ IF +AK+R+ +LQ+ +A+L YL R ++D NM+
Sbjct: 215 KVIDRTQLILDIFARNAKSRDGKLQVELAQLKYLKGRLTELDD--NMSRLTGGIGGRGPG 272
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ + + ER +L+ L LK +RE+ R ++++ + P V +VGYTN GK+T + A
Sbjct: 273 ETKLEIGKRRVEERITRLEVELKSLKKRREINRRQRKKNELPAVGIVGYTNAGKSTFLNA 332
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT+ + L N+LFATLD TT P I+ DT+GFI ++P L FK TLE+
Sbjct: 333 LTNSEVL-SENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPELSNAFKATLEELR 391
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+D+++HVVD+SNPDY Q + V++ L+ LEL L V NK+D
Sbjct: 392 DSDLLVHVVDISNPDYKLQMEAVEKILEELELSHIPLIQVF---NKID 436
>gi|68536185|ref|YP_250890.1| GTP-binding protein [Corynebacterium jeikeium K411]
gi|68263784|emb|CAI37272.1| putative GTP-binding protein [Corynebacterium jeikeium K411]
Length = 484
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 169/321 (52%), Gaps = 29/321 (9%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G+G +E LK V T V L Q L+ V V DR M+++ I
Sbjct: 108 DSGTYIGRGKVEELKSVVLETGADT--VVCDGELSPGQMIALEKALDVKVIDRTMLILDI 165
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HAK++E + Q+++A++ YL TR R A N G +++
Sbjct: 166 FAQHAKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAGGRAGSNGGVGLRGPGETKIEAD 225
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R L KL+K + +K RE+ R ++ P +A+ GYTN GK++LI ALT L
Sbjct: 226 RRRLRSDMAKLRKEIAAMKTSREVKRERRDASAIPQIAIAGYTNAGKSSLINALTGAGVL 285
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V + LFATLD TT L + +++ DT+GF+ ++PT L+E F+ TLE+ + AD+++H
Sbjct: 286 V-EDALFATLDPTTRRANLADGRAVVFSDTVGFVRHLPTQLVEAFRSTLEEVLAADVVLH 344
Query: 363 VVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVVGNKVDAVPP------GERVTEE 414
VVD S+P L+Q + V+ + + E ++ +LV+ NK+DA P R+ +
Sbjct: 345 VVDGSDPFPLEQIKAVNTVIGGIVEESGQEAPPEILVI-NKIDAADPLVLAELRHRIPDA 403
Query: 415 YDLLISATRGTGLAQLKEKVQ 435
+ +SA G G+ +L+ +++
Sbjct: 404 --VYVSAKTGEGIPELEAQLE 422
>gi|410659559|ref|YP_006911930.1| GTP-binding protein HflX [Dehalobacter sp. DCA]
gi|410662538|ref|YP_006914909.1| GTP-binding protein HflX [Dehalobacter sp. CF]
gi|409021914|gb|AFV03945.1| GTP-binding protein HflX [Dehalobacter sp. DCA]
gi|409024894|gb|AFV06924.1| GTP-binding protein HflX [Dehalobacter sp. CF]
Length = 601
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 182/349 (52%), Gaps = 19/349 (5%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D + G G LE L++ ++ R + + + L QQ++L++ + V R +++ I
Sbjct: 235 DSSTIIGPGKLEELQQMIQ--TRQADLVIFDEELNGTQQRILEEKLGLKVLSRTGLILDI 292
Query: 198 FKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMER 249
F HA++RE LQ+ +A+L Y R R + L++ R + R
Sbjct: 293 FAQHARSREGILQVELAQLEYRLPRLTGTGVALSRLGGGIGTRGPGETKLETDRRHIRSR 352
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
L++ L+ ++ QR ++R +Q+ P +++VGYTN GK+TL+ AL D L ++LF
Sbjct: 353 IAHLRERLDDIRRQRGVLRGNRQKNNIPVLSIVGYTNAGKSTLLNALCGSDVLA-EDKLF 411
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD TT + L N +L DT+GFI +P LL+ FK TLE+ +L+D I+ V D ++P
Sbjct: 412 ATLDPTTRKLPLNNGSTVLLSDTVGFIRRLPPNLLDAFKSTLEEVVLSDQILIVADAADP 471
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT---EEYDLL-ISATRGT 425
VDE L L K L+V NKVD + P R++ E ++ ISA + +
Sbjct: 472 QVEDHIWIVDEILAELGAGSK---PTLIVLNKVDRLHPDNRISLWRETRPVVEISALQRS 528
Query: 426 GLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDD 474
GL +LK+ ++ + R ++ + V S G+ WL +T V + D+
Sbjct: 529 GLEELKQAIEKELFSDHIRVSLEIPV-SDGAALAWLYANTKVLEVVYDE 576
>gi|359427034|ref|ZP_09218109.1| GTP-binding protein HflX [Gordonia amarae NBRC 15530]
gi|358237647|dbj|GAB07691.1| GTP-binding protein HflX [Gordonia amarae NBRC 15530]
Length = 498
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 179/346 (51%), Gaps = 25/346 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G +V+D I + D ++ G G + L++ V T + L Q
Sbjct: 101 AALAETAGSQVLDGLIQRRSTPDAATYIGSGKADELRQVVLSTGADT--VICDGELTPAQ 158
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA------ 229
L+ + +V V DR +++ IF HA +RE + Q+++A++ Y+ R R ++
Sbjct: 159 LTALEKVVKVKVIDRTALILDIFAQHATSREGKAQVSLAQMEYMLPRLRGWGESMSRQAG 218
Query: 230 --TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
N G +++ R + ER KL++ + ++K R R +QR P +
Sbjct: 219 GRAGSNGGVGLRGPGETKIETDRRRIRERMAKLRREIREMKTARTTKRAARQRSSIPKIT 278
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
V GYTN GK++L+ A+T LV ++ LFATLD TT L + +++ DT+GF+ ++P
Sbjct: 279 VAGYTNAGKSSLVNAMTGSGVLV-QDALFATLDPTTRRATLADGREVVFTDTVGFVRHLP 337
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV-LVVG 399
T L+E F+ TLE+ + AD+++HVVD S+P +Q V + + EE + L+V
Sbjct: 338 TQLVEAFRSTLEEVVDADLLLHVVDGSDPFPTEQIAAVRRVINEIVAEEGVAPPPELLVV 397
Query: 400 NKVDAVPPGERVTEEYDLL-----ISATRGTGLAQLKEKVQDMILK 440
NK+DA+ R TE +L +SA G GL +L ++++ + +
Sbjct: 398 NKIDAIDENRR-TELRGILDGAMFVSAHTGEGLPELFDRIRAEVAR 442
>gi|260753127|ref|YP_003226020.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|384411813|ref|YP_005621178.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|258552490|gb|ACV75436.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|335932187|gb|AEH62727.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 460
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 215/449 (47%), Gaps = 37/449 (8%)
Query: 73 IRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTII 132
+R EA + G +V +V P ++ KR+T + L E+ L +I G VV
Sbjct: 5 VRSEADGVSHGA--RVLIVLPELE--DNNKRST--EARLEEATGLACAI-GLDVVSKLAF 57
Query: 133 SLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYM 192
L + + FG G +E + R D V V V + + QQ+ L+ V V DR
Sbjct: 58 HLRAPKASTLFGPGQVEQIVTAAR-DEEVDLVIVDGPLTPI-QQRNLETSLDVKVIDRTG 115
Query: 193 IVIQIFKAHAKTREARLQIAIAELPY-------LWT---RYRTIEDATNMNITKGFLDSK 242
++++IF A A T E RLQ+ +A L Y WT R R +
Sbjct: 116 LILEIFGARAATAEGRLQVELAHLDYQAGRLVRTWTHLERQRGGFGFLGGPGETQIEADR 175
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
RM+ +R KL++ L ++ R + R ++++ +P VA+VGYTN GK+TL +T D +
Sbjct: 176 RMI-RDRMAKLRRDLAQVTRTRGLHRARRKKAPWPVVALVGYTNAGKSTLFNRMTGAD-V 233
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
+ ++ LFATLD T + LP + + DT+GF+S++PT L+ F+ TLE+ AD+I+H
Sbjct: 234 MAKDLLFATLDPTMRQIALPGIDKAILSDTVGFVSDLPTQLVAAFRATLEEVTAADLILH 293
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELEE-----KILEHVLVVGNKVDAVP-------PGER 410
V D++ D +++ V+ L + + + V+ NK D + E
Sbjct: 294 VRDIAQEDSESEREDVERVLAEIGIAPVEDGGEFAIPVIEAWNKSDLLSEEAHESLAAEA 353
Query: 411 VTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHT-AVSN 469
+ LISA G G+ L+E V + +A ++I + V + G WL H VS+
Sbjct: 354 ARRDDVALISAWTGEGIEDLRELVSQRLSEAHRLRHIDIPV-TEGQAMAWLYAHGDVVSD 412
Query: 470 IREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
+ D+T + DV M+D +F F
Sbjct: 413 VMNDETG--KMEFDVRMSDENWGRFIERF 439
>gi|307608760|emb|CBW98143.1| hypothetical protein LPW_00091 [Legionella pneumophila 130b]
Length = 414
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 182/342 (53%), Gaps = 25/342 (7%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D LAE + L S + V+D + + + D K + GKG E + V + A V
Sbjct: 24 DKALAEFEELALSAKA-EVLDCVLGARATPDAKYYVGKGKAEEIAHLVN---MLDADLVL 79
Query: 168 VD-VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI 226
V+ L Q++ L+ LF V DR +++ IF A+T E +LQ+ +A+L +L TR I
Sbjct: 80 VNHELSPSQERNLERLFGCRVVDRSGLILDIFAQRARTFEGKLQVELAQLQHLSTRL--I 137
Query: 227 EDATNMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
T++ KG L++ R +L ER + + K L K++ R+ R +++
Sbjct: 138 RGWTHLERQKGGIGLRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKASM 197
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
PTV++VGYTN GK+TL LT + + V +QLFATLD T + LP + DT+GFI
Sbjct: 198 PTVSLVGYTNAGKSTLFNVLTGEHTYVA-DQLFATLDPTMRKLELPGSSAAILADTVGFI 256
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++P L+E F+ TLE+ AD+++HV+D+S+P++ + V + L L++ V+
Sbjct: 257 RDLPHHLVEAFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDDLKVNNI---PVI 313
Query: 397 VVGNKVDA----VPPGERVTEEYDLLISATRGTGLAQLKEKV 434
V NK+D P + + + +SAT G GL LKE +
Sbjct: 314 QVFNKIDLQEGWQPKIDYTEDSCKVWLSATTGAGLDLLKEAI 355
>gi|404484082|ref|ZP_11019296.1| GTP-binding protein HflX [Clostridiales bacterium OBRC5-5]
gi|404342762|gb|EJZ69132.1| GTP-binding protein HflX [Clostridiales bacterium OBRC5-5]
Length = 415
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 176/330 (53%), Gaps = 18/330 (5%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V++S I S ++ GKG +E +K +V + T V V D L Q + L+DL
Sbjct: 39 GATVLESIIQSRERMHPGTYIGKGKIEEVKDRVI-ELGATGV-VCDDELTPAQLRNLEDL 96
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNI 234
V DR M+++ IF A T E ++Q+ +A+L + R R
Sbjct: 97 LDTKVMDRTMVILDIFAKRATTSEGKIQVELAQLKFSAARLVGLRSSLSRLGGGIGTRGP 156
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ L+ R ++ ER +LK L K++ RE++R + VA+VGYTN GK+TL+
Sbjct: 157 GEKKLEMDRRLIHERISQLKAELKKVENHRELIRKSRDENLAFNVAIVGYTNAGKSTLLN 216
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LTD + ++ ++LFATLD TT + L + IL DT+GFI +P L+E FK TLE+A
Sbjct: 217 KLTDAN-ILAEDKLFATLDPTTRKLKLGSGQEILVTDTVGFIRKLPHHLIEAFKSTLEEA 275
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEE 414
A+++IH+VD SN + Q V +TL+ L++ +K ++ V NK D + + +
Sbjct: 276 KYANLLIHMVDASNEEASSQMLVVYDTLRSLDVVDK---DIITVFNKTDLMEENMELPRD 332
Query: 415 YD----LLISATRGTGLAQLKEKVQDMILK 440
+ L +SA G G+ LK+ V+D++ K
Sbjct: 333 FHADKVLKMSAKTGVGIEDLKKTVEDILQK 362
>gi|386740570|ref|YP_006213750.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis 31]
gi|389850589|ref|YP_006352824.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis 258]
gi|384477264|gb|AFH91060.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis 31]
gi|388247895|gb|AFK16886.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis 258]
Length = 539
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 175/341 (51%), Gaps = 25/341 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G VVD D ++ G G + LK V T V L Q
Sbjct: 140 AALAETAGSEVVDMLYQKRDKPDPGTYIGSGKVAELKDIVMSTGVDTVVCDGE--LSPGQ 197
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA------ 229
L+ V V DR M+++ IF HAK++E + Q+++A++ YL TR R A
Sbjct: 198 MIALEKALDVKVIDRTMLILDIFAQHAKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAG 257
Query: 230 --TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
N G +++ R L KL+K + +K RE+ R++++ P +A
Sbjct: 258 GRAGSNGGVGLRGPGETKIEADRRRLRSDMAKLRKEIAGMKTAREVKRSQRRESTIPQIA 317
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+ GYTN GK++LI ALTD LV + LFATLD TT L + +++ DT+GF+ ++P
Sbjct: 318 IAGYTNAGKSSLINALTDAGVLV-EDALFATLDPTTRRAELADGRSVVFTDTVGFVRHLP 376
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVV 398
T L+E F+ TLE+ + AD+++HVVD S+P L+Q + V+ + + EL+ + ++VV
Sbjct: 377 TQLVEAFRSTLEEVVGADLVLHVVDGSDPFPLEQIKAVNGVISDIVRELKVEAPPEIIVV 436
Query: 399 GNKVDAVPPGERVTEEYDL----LISATRGTGLAQLKEKVQ 435
NK+D P + L +SA G G+ +L+ +++
Sbjct: 437 -NKIDQADPLVLAELRHALDDVVFVSAQEGDGIPELEARIE 476
>gi|385241750|ref|YP_005809590.1| putative nucleotide-binding protein [Chlamydia trachomatis E/11023]
gi|385245357|ref|YP_005814180.1| putative nucleotide-binding protein [Chlamydia trachomatis E/150]
gi|386262732|ref|YP_005816011.1| putative nucleotide-binding protein [Chlamydia trachomatis Sweden2]
gi|389858947|ref|YP_006361188.1| nucleotide-binding protein [Chlamydia trachomatis E/SW3]
gi|289525420|emb|CBJ14897.1| putative nucleotide-binding protein [Chlamydia trachomatis Sweden2]
gi|296434973|gb|ADH17151.1| putative nucleotide-binding protein [Chlamydia trachomatis E/150]
gi|296438693|gb|ADH20846.1| putative nucleotide-binding protein [Chlamydia trachomatis E/11023]
gi|380250896|emb|CCE12657.1| putative nucleotide-binding protein [Chlamydia trachomatis E/SW3]
gi|440529756|emb|CCP55240.1| GTPase HflX [Chlamydia trachomatis E/SotonE4]
gi|440530655|emb|CCP56139.1| GTPase HflX [Chlamydia trachomatis E/SotonE8]
gi|440535123|emb|CCP60633.1| GTPase HflX [Chlamydia trachomatis E/Bour]
gi|440536901|emb|CCP62415.1| GTPase HflX [Chlamydia trachomatis L1/440/LN]
gi|440538681|emb|CCP64195.1| GTPase HflX [Chlamydia trachomatis L1/115]
gi|440539570|emb|CCP65084.1| GTPase HflX [Chlamydia trachomatis L1/224]
gi|440541350|emb|CCP66864.1| GTPase HflX [Chlamydia trachomatis L3/404/LN]
Length = 447
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 152/281 (54%), Gaps = 21/281 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ +V V DR ++++IF + A T EA LQ+ +A+ YL R + +
Sbjct: 113 QQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLPRLKRMWGHLSRQK 172
Query: 227 EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
+ KG ++ R ++ ER KL + L ++ QRE R K+R + PT A++
Sbjct: 173 SGGSGGGFVKGEGEKQIELDRRIVRERIHKLSRDLKNVERQREERRKAKKRNQIPTFALI 232
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ LT D+ N+LFATLD T +LP R+L DT+GFI +P T
Sbjct: 233 GYTNSGKSTLLNLLTSADTYA-ENKLFATLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHT 291
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+ FK TLE A+ DI++HVVD S+P L+ + LQ L + + V+ V NK+
Sbjct: 292 LVAAFKSTLEAALQEDILLHVVDASHPLALEHVETTKAILQELGITQP---QVITVLNKM 348
Query: 403 DAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMI 438
D V G R+ + +SA G G+ +L ++DM+
Sbjct: 349 DKVADGVTASRLRLMSPNPVCVSAKTGEGIRELLRSMEDMV 389
>gi|194390016|dbj|BAG60524.1| unnamed protein product [Homo sapiens]
Length = 380
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 132/219 (60%), Gaps = 20/219 (9%)
Query: 105 TTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAV 164
T ++ +AE+ ALV ++ GW VV + ++S + D+K FGKGN E L ++RG +T V
Sbjct: 2 TRAEWQVAEATALVHTLDGWSVVQTMVVSTKTPDRKLIFGKGNFEHLTEKIRGSPDITCV 61
Query: 165 FVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTR-- 222
F++V+ + +K L+ + V VFDR+ +V+ IF+ +A+T+EARLQ+A+AE+P +
Sbjct: 62 FLNVERMAAPTKKELEAAWGVEVFDRFTVVLHIFRCNARTKEARLQVALAEMPLHRSNLK 121
Query: 223 ------YRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
YR + M + F+ ++ +L E+E K++KAL++L+ +R ++R ++ R++F
Sbjct: 122 RDVAHLYRGVGSRYIMGSGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREF 181
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
P ++VVGYTNCG+ PR F L VT
Sbjct: 182 PVISVVGYTNCGEH------------APRGGAFRGLRVT 208
>gi|291296070|ref|YP_003507468.1| GTP-binding proten HflX [Meiothermus ruber DSM 1279]
gi|290471029|gb|ADD28448.1| GTP-binding proten HflX [Meiothermus ruber DSM 1279]
Length = 560
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 173/344 (50%), Gaps = 36/344 (10%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V ++ S D + G+G +E L T +F +D L Q
Sbjct: 209 AELARTAGAVVAHKELVFRPSLDPRYAVGRGKVEELVSHAYHQNAGTLIF-GID-LSAAQ 266
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIE 227
+ L+ + + V DR +++ IF HA+T EA++Q+ +A+L YL R R
Sbjct: 267 ARELETITGLKVLDRTQLILDIFAQHARTPEAKVQVELAQLKYLLPRLVGKGKELSRLGG 326
Query: 228 DATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
+ L+ R L +R +L + L ++ G+R+ R ++ + P V VVGYTN
Sbjct: 327 GIGTRGPGETKLEVDRRRLQDRIAELTRKLQEIAGRRQETRRQRDKSGLPIVGVVGYTNA 386
Query: 288 GKTTLIKALT--DDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLE 345
GKTTL+ AL D+ N+LFATL T G LP +L+ DT+GFI ++P LLE
Sbjct: 387 GKTTLMHALAKKGDEG---ENKLFATLRPLTRRGFLPGIGEVLFTDTVGFIRHMPGDLLE 443
Query: 346 PFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV 405
F+ TLE+ AD+++HV+D S L++ Q V++ L L +E VLV+ +K DA
Sbjct: 444 AFRSTLEELRDADVLLHVLDASQEGALERYQVVEDLLAELGVESP---QVLVL-SKADA- 498
Query: 406 PPGERVTEEYDL----------LISATRGTGLAQLKEKVQDMIL 439
+ YDL +SA RG GL +LK+ V + +L
Sbjct: 499 ------ADGYDLEFLRERLGGFPVSAVRGQGLGELKQAVAEALL 536
>gi|114771148|ref|ZP_01448588.1| GTP-binding protein HflX [Rhodobacterales bacterium HTCC2255]
gi|114548430|gb|EAU51316.1| GTP-binding protein HflX [alpha proteobacterium HTCC2255]
Length = 417
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 198/382 (51%), Gaps = 25/382 (6%)
Query: 106 TRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVF 165
T + L E+ +L +++ ++ +I L + + FG G L L Q+ + V
Sbjct: 18 TPEHSLEEAVSLANALD-IEILHEAVIPLKKPNAGTLFGSGKL-LELSQIFKSNDIDLVI 75
Query: 166 VSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRT 225
+ + + QQ+ L+ + + V DR ++++IF A+TRE LQ+ +A L Y R R
Sbjct: 76 IDGPLTPI-QQRNLEKEWNLKVLDRTGLILEIFGDRAQTREGVLQVDLAALNY--QRSRL 132
Query: 226 IEDATNMNITKGFL-----------DSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQ 274
+ T++ +G L +S R + + +LKK L K+ RE+ R+ +++
Sbjct: 133 VRTWTHLERQRGGLSFIGGAGETQIESDRRQIDDAILRLKKQLEKVVKTRELHRSARKKI 192
Query: 275 KFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIG 334
+P VA+VGYTN GK+TL +T + ++ LFATLD T E LP+ +I+ DT+G
Sbjct: 193 PYPIVALVGYTNAGKSTLFNYMTGA-KVFAKDMLFATLDPTMREVELPSGQKIILSDTVG 251
Query: 335 FISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEH 394
FIS +PT L+ F+ TLE+ + A++I+HV D+S+P+ Q V++ L+ L++ + +
Sbjct: 252 FISELPTQLIAAFRATLEEVLDANLILHVRDISHPETEAQANDVNDILEELDVSDNTKSN 311
Query: 395 VLVVGNKVDAVPPGERVT-------EEYDLLISATRGTGLAQLKEKVQDMILKATGRKNI 447
+L V NK D + E + E +SA G GL+ L ++ + + + T +
Sbjct: 312 ILEVWNKTDLLSNDELINAKNISDRSEKIRTVSALTGDGLSVLLSEIDENLKEITVSDVV 371
Query: 448 TMRVRSGGSEYQWLMKHTAVSN 469
+ + GG WL K+ V N
Sbjct: 372 KLALTEGGRR-AWLYKNNLVKN 392
>gi|417778740|ref|ZP_12426541.1| GTP-binding protein HflX [Leptospira weilii str. 2006001853]
gi|410781159|gb|EKR65737.1| GTP-binding protein HflX [Leptospira weilii str. 2006001853]
Length = 557
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 158/288 (54%), Gaps = 18/288 (6%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VVD+ I D + GKG LE + ++ + + V L Q K + D+ +
Sbjct: 193 VVDTFIQRKNRLDPSTVLGKGKLEEI--ILKAIQKHVELLVFDLELTPSQAKKISDIADI 250
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN----------IT 235
V DR +++ IF +AK+R+ +LQ+ +A+L YL R ++D NM+
Sbjct: 251 KVIDRTQLILDIFARNAKSRDGKLQVELAQLKYLKGRLTELDD--NMSRLTGGIGGRGPG 308
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ + + ER +L+ L L+ +RE+ R +++R + P V +VGYTN GK+T + A
Sbjct: 309 ETKLEIGKRRVEERITRLEVELKSLRKRREINRRQRKRNELPAVGIVGYTNAGKSTFLNA 368
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT+ + L N+LFATLD TT P I+ DT+GFI ++P L FK TLE+
Sbjct: 369 LTNSEVL-SENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPELSNAFKATLEELG 427
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+D+++HVVDVSNPDY Q + V++ L+ LEL + V NK+D
Sbjct: 428 DSDLLVHVVDVSNPDYKLQMEAVEKILEELELSHIPMIQVF---NKID 472
>gi|399075290|ref|ZP_10751476.1| GTP-binding protein HflX [Caulobacter sp. AP07]
gi|398039210|gb|EJL32350.1| GTP-binding protein HflX [Caulobacter sp. AP07]
Length = 446
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 198/391 (50%), Gaps = 28/391 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VV++ I L + FGKG +E + AVF D L QQ+ L+ V
Sbjct: 56 VVETMIAPLRLVTPATLFGKGKIEEFAALCEVEKIDVAVFD--DQLTPVQQRNLERALNV 113
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
V DR ++++IF A+TRE +LQ+ +A L Y R R + T++ +G
Sbjct: 114 KVVDRTGLILEIFARRARTREGKLQVELARLDY--ERSRLVRTWTHLERQRGGTGNTGGP 171
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
++ R ++ + KLK+ L++++ R + R+++++ +PTVA+VGYTN GK+TL
Sbjct: 172 GETQIELDRRLIRDNILKLKRELDEVRRTRTLHRSQRKKVPYPTVALVGYTNAGKSTLFN 231
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT ++V ++ LFATLD T LP+ + DT+GFIS++P L+E F+ TLE+
Sbjct: 232 RLTHA-TVVAQDMLFATLDPTLRNVKLPDGRPAILSDTVGFISDLPHELVEAFRATLEEV 290
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER---- 410
AD+++HV DV+NPD Q + V L L++ + + +L V NK+D V R
Sbjct: 291 QEADVVLHVRDVANPDTDAQARDVQAVLAELKVTTEDGKTILEVWNKIDLVDGEAREILD 350
Query: 411 --VTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG-GSEYQWLMKHTAV 467
+SA G G +L ++V +I + +R+ +G G W+ ++ V
Sbjct: 351 GQARRRGAAAVSAVTGEGCVELLKRVGALI---DDTPPVAVRLAAGDGEALAWIYRNGRV 407
Query: 468 SNIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
+ E+ L+ + + +F+ +F
Sbjct: 408 ESREEEAEGGVRLI--ARLDAQALGRFERQF 436
>gi|359728885|ref|ZP_09267581.1| GTPase [Leptospira weilii str. 2006001855]
Length = 557
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 158/288 (54%), Gaps = 18/288 (6%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VVD+ I D + GKG LE + ++ + + V L Q K + D+ +
Sbjct: 193 VVDTFIQRKNRLDPSTVLGKGKLEEI--ILKAIQKHVELLVFDLELTPSQAKKISDIADI 250
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN----------IT 235
V DR +++ IF +AK+R+ +LQ+ +A+L YL R ++D NM+
Sbjct: 251 KVIDRTQLILDIFARNAKSRDGKLQVELAQLKYLKGRLTELDD--NMSRLTGGIGGRGPG 308
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ + + ER +L+ L L+ +RE+ R +++R + P V +VGYTN GK+T + A
Sbjct: 309 ETKLEIGKRRVEERITRLEVELKSLRKRREINRRQRKRNELPAVGIVGYTNAGKSTFLNA 368
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT+ + L N+LFATLD TT P I+ DT+GFI ++P L FK TLE+
Sbjct: 369 LTNSEVL-SENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPELSNAFKATLEELG 427
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+D+++HVVDVSNPDY Q + V++ L+ LEL + V NK+D
Sbjct: 428 DSDLLVHVVDVSNPDYKLQMEAVEKILEELELSHIPMIQVF---NKID 472
>gi|421109391|ref|ZP_15569911.1| GTP-binding protein HflX [Leptospira kirschneri str. H2]
gi|410005435|gb|EKO59226.1| GTP-binding protein HflX [Leptospira kirschneri str. H2]
Length = 518
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 160/290 (55%), Gaps = 22/290 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VVD+ I D + GKG LE + ++ + + V L Q K + D+ +
Sbjct: 156 VVDTFIQRKNRLDPSTVLGKGKLEEI--ILKAIQKHVELLVFDLELTPSQAKKISDIADI 213
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN----------IT 235
V DR +++ IF +AK+R+ +LQ+ +A+L YL R ++D NM+
Sbjct: 214 KVIDRTQLILDIFARNAKSRDGKLQVELAQLKYLKGRLTELDD--NMSRLTGGIGGRGPG 271
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ + + ER +L+ L LK +RE+ R ++++ + P V +VGYTN GK+T + A
Sbjct: 272 ETKLEIGKRRVEERITRLEVELKSLKKRREINRRQRKKNELPAVGIVGYTNAGKSTFLNA 331
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT+ + L N+LFATLD TT P I+ DT+GFI ++P L FK TLE+
Sbjct: 332 LTNSEVL-SENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPELSNAFKATLEELG 390
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV--LVVGNKVD 403
+D+++HVVDVSNPDY Q + V++ L+ LE L H+ + V NK+D
Sbjct: 391 DSDLLVHVVDVSNPDYKLQMEAVEKILEELE-----LSHIPMIQVFNKID 435
>gi|315604445|ref|ZP_07879511.1| GTP-binding protein [Actinomyces sp. oral taxon 180 str. F0310]
gi|315314151|gb|EFU62202.1| GTP-binding protein [Actinomyces sp. oral taxon 180 str. F0310]
Length = 515
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 172/347 (49%), Gaps = 30/347 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G RV+D I D ++ G G L VR V A V VD L
Sbjct: 110 AALAETAGSRVLDGIIQRRSKPDPATYLGSGKARELAEIVRA---VEADTVIVDEELAPS 166
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 167 QRRGLEDVVDAKVVDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQA 226
Query: 235 -----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
TK LD +R + R KLK + +++ R R ++R P
Sbjct: 227 GGRVAGGAGIGSRGPGETKIELDRRR--IRTRMAKLKADIARMEPARRTQRQSRRRGAVP 284
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+VA+ GYTN GK+TL+ LTD LV ++ LFATLD T + DT+GF+
Sbjct: 285 SVAIAGYTNAGKSTLLNRLTDAGVLV-QDALFATLDPTVRRARAADGREYTLTDTVGFVR 343
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
N+PT L+E F+ TLE+ AD+I+HVVD ++PD + Q Q V + +E I E L+
Sbjct: 344 NLPTQLVEAFRSTLEEVGQADLIVHVVDAAHPDPVSQVQAVRSVIDTIEGARDIPE--LI 401
Query: 398 VGNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
NK D P + R + +SA G G+ L+ V+DM+ +
Sbjct: 402 ALNKADLASPEQIALLRTVFPGAVALSARTGWGVDALRAAVEDMLPR 448
>gi|297243698|ref|ZP_06927629.1| GTPase [Gardnerella vaginalis AMD]
gi|296888449|gb|EFH27190.1| GTPase [Gardnerella vaginalis AMD]
Length = 507
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 179/360 (49%), Gaps = 26/360 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLH 174
A ++ G V D + D ++ G G EL + DA V D L
Sbjct: 114 AALAQTAGAVVCDGMLQQRYRPDAATYVGSGKARELAAIVAQHDADTIIVD---DDLPPS 170
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--- 231
Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 171 QRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQLQYMLPRLRGWGAALSRQA 230
Query: 232 --------MNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++G ++K R + R KL+ + + R++ R ++RQ PTV
Sbjct: 231 GGRAAGDAGIGSRGPGETKIEMDRRAIRNRISKLRHDIANMAPARDVKRGSRRRQDIPTV 290
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GK+++I LT LV N LFATLD + VDT+GF+ +
Sbjct: 291 AVVGYTNAGKSSIINRLTGSQELV-ENALFATLDTAVRRSQTQDGRSYTLVDTVGFVRRL 349
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E FK TLE+ AD+I+HVVD S+PD + Q V+E L ++ E + + ++
Sbjct: 350 PTQLVEAFKSTLEEVGQADVILHVVDGSHPDPISQINAVNEVLANISGVEDMPQ--IMAL 407
Query: 400 NKVDAVPPG--ERVTEEYD--LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGG 455
NK D + ER + Y +++SA G L L+ ++++++ R ++T+ GG
Sbjct: 408 NKSDMMSDAARERFSSLYPDAVIVSAFSGENLQILRNRLEELLPSPRVRVDVTLPYEFGG 467
>gi|398340159|ref|ZP_10524862.1| GTP-binding protein [Leptospira kirschneri serovar Bim str. 1051]
Length = 518
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 160/290 (55%), Gaps = 22/290 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VVD+ I D + GKG LE + ++ + + V L Q K + D+ +
Sbjct: 156 VVDTFIQRKNRLDPSTVLGKGKLEEI--ILKAIQKHVELLVFDLELTPSQAKKISDIADI 213
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN----------IT 235
V DR +++ IF +AK+R+ +LQ+ +A+L YL R ++D NM+
Sbjct: 214 KVIDRTQLILDIFARNAKSRDGKLQVELAQLKYLKGRLTELDD--NMSRLTGGIGGRGPG 271
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ + + ER +L+ L LK +RE+ R ++++ + P V +VGYTN GK+T + A
Sbjct: 272 ETKLEIGKRRVEERITRLEVELKSLKKRREINRRQRKKNELPAVGIVGYTNAGKSTFLNA 331
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT+ + L N+LFATLD TT P I+ DT+GFI ++P L FK TLE+
Sbjct: 332 LTNSEVL-SENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPELSNAFKATLEELG 390
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV--LVVGNKVD 403
+D+++HVVDVSNPDY Q + V++ L+ LE L H+ + V NK+D
Sbjct: 391 DSDLLVHVVDVSNPDYKLQMEAVEKILEELE-----LSHIPMIQVFNKID 435
>gi|418697798|ref|ZP_13258784.1| GTP-binding protein HflX [Leptospira kirschneri str. H1]
gi|409954407|gb|EKO13362.1| GTP-binding protein HflX [Leptospira kirschneri str. H1]
Length = 519
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 160/290 (55%), Gaps = 22/290 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VVD+ I D + GKG LE + ++ + + V L Q K + D+ +
Sbjct: 157 VVDTFIQRKNRLDPSTVLGKGKLEEI--ILKAIQKHVELLVFDLELTPSQAKKISDIADI 214
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN----------IT 235
V DR +++ IF +AK+R+ +LQ+ +A+L YL R ++D NM+
Sbjct: 215 KVIDRTQLILDIFARNAKSRDGKLQVELAQLKYLKGRLTELDD--NMSRLTGGIGGRGPG 272
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ + + ER +L+ L LK +RE+ R ++++ + P V +VGYTN GK+T + A
Sbjct: 273 ETKLEIGKRRVEERITRLEVELKSLKKRREINRRQRKKNELPAVGIVGYTNAGKSTFLNA 332
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT+ + L N+LFATLD TT P I+ DT+GFI ++P L FK TLE+
Sbjct: 333 LTNSEVL-SENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPELSNAFKATLEELG 391
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV--LVVGNKVD 403
+D+++HVVDVSNPDY Q + V++ L+ LE L H+ + V NK+D
Sbjct: 392 DSDLLVHVVDVSNPDYKLQMEAVEKILEELE-----LSHIPMIQVFNKID 436
>gi|421131519|ref|ZP_15591700.1| GTP-binding protein HflX [Leptospira kirschneri str. 2008720114]
gi|410357068|gb|EKP04348.1| GTP-binding protein HflX [Leptospira kirschneri str. 2008720114]
Length = 519
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 160/290 (55%), Gaps = 22/290 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VVD+ I D + GKG LE + ++ + + V L Q K + D+ +
Sbjct: 157 VVDTFIQRKNRLDPSTVLGKGKLEEI--ILKAIQKHVELLVFDLELTPSQAKKISDIADI 214
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN----------IT 235
V DR +++ IF +AK+R+ +LQ+ +A+L YL R ++D NM+
Sbjct: 215 KVIDRTQLILDIFARNAKSRDGKLQVELAQLKYLKGRLTELDD--NMSRLTGGIGGRGPG 272
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ + + ER +L+ L LK +RE+ R ++++ + P V +VGYTN GK+T + A
Sbjct: 273 ETKLEIGKRRVEERITRLEVELKSLKKRREINRRQRKKNELPAVGIVGYTNAGKSTFLNA 332
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT+ + L N+LFATLD TT P I+ DT+GFI ++P L FK TLE+
Sbjct: 333 LTNSEVL-SENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPELSNAFKATLEELG 391
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV--LVVGNKVD 403
+D+++HVVDVSNPDY Q + V++ L+ LE L H+ + V NK+D
Sbjct: 392 DSDLLVHVVDVSNPDYKLQMEAVEKILEELE-----LSHIPMIQVFNKID 436
>gi|397676775|ref|YP_006518313.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis ATCC
29191]
gi|395397464|gb|AFN56791.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis ATCC
29191]
Length = 460
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/449 (29%), Positives = 217/449 (48%), Gaps = 37/449 (8%)
Query: 73 IRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTII 132
+R EA + G +V +V P ++ KR+T + L E+ L +I G VV
Sbjct: 5 VRSEADGVSHGA--RVLIVLPELE--DNNKRST--EARLEEATGLACAI-GLDVVSKLAF 57
Query: 133 SLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYM 192
L + + FG G +E + R D V V V + + QQ+ L+ V V DR
Sbjct: 58 HLRAPKASTLFGPGQVEQIVTAAR-DEEVDLVIVDGPLTPI-QQRNLETSLDVKVIDRTG 115
Query: 193 IVIQIFKAHAKTREARLQIAIAELPY-------LWT---RYRTIEDATNMNITKGFLDSK 242
++++IF A A T E RLQ+ +A L Y WT R R +
Sbjct: 116 LILEIFGARAATAEGRLQVELAHLDYQAGRLVRTWTHLERQRGGFGFLGGPGETQIEADR 175
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
RM+ +R KL++ L ++ R + R ++++ +P VA+VGYTN GK+TL +T D +
Sbjct: 176 RMI-RDRMAKLRRDLAQVTRTRGLHRARRKKAPWPVVALVGYTNAGKSTLFNRMTGAD-V 233
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
+ ++ LFATLD T + LP + + DT+GF+S++PT L+ F+ TLE+ AD+I+H
Sbjct: 234 MAKDLLFATLDPTMRQIALPGIDKAILSDTVGFVSDLPTQLVAAFRATLEEVTAADLILH 293
Query: 363 VVDVSNPDYLQQKQHVDETLQHL---ELEE--KILEHVLVVGNKVDAVP-------PGER 410
V D++ D +++ V+ L + +EE + ++ NK D + E
Sbjct: 294 VRDIAQEDSESEREDVERVLAEIGIAPVEEGGEFAIPIIEAWNKSDLLSEEAHESLAAEA 353
Query: 411 VTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHT-AVSN 469
+ LISA G G+ L+E V + +A ++I + V + G WL H VS+
Sbjct: 354 ARRDDVALISAWTGEGIEDLRELVSQRLSEAHRLRHIDLPV-TEGQAMAWLYAHGDVVSD 412
Query: 470 IREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
+ D+T + DV M+D +F F
Sbjct: 413 VMNDET--RKMEFDVRMSDENWGRFIERF 439
>gi|304389603|ref|ZP_07371565.1| GTP-binding protein [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|304327156|gb|EFL94392.1| GTP-binding protein [Mobiluncus curtisii subsp. curtisii ATCC
35241]
Length = 524
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 168/325 (51%), Gaps = 34/325 (10%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVD-VLKLHQQKMLQDLFQVPVFDRYMIVIQ 196
D +F G+G L+ QV A + A V VD L Q++ L+D+ +V V DR +++
Sbjct: 136 DVATFLGRGKAHELQTQV---ATLGADTVIVDDELAPSQRRALEDVVKVKVIDRTALILD 192
Query: 197 IFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI-----------------TKGFL 239
IF HA +RE + Q+ +A+L YL R R ++ + TK L
Sbjct: 193 IFAQHATSREGKAQVELAQLEYLLPRLRGWGESMSRQAGGRAAAGDGIGARGPGETKIEL 252
Query: 240 DSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDD 299
D +R+ +L++ L L RE R ++ P VA+VGYTN GK++L+ L
Sbjct: 253 DRRRIRSRM--ARLRRNLKALAPTREAKRASRKAGGIPAVAIVGYTNAGKSSLLNRLAGA 310
Query: 300 DSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADI 359
+ LV + LFATLD + P DT+GF+ +PT L+E F+ TLE+ +AD+
Sbjct: 311 NLLV-HDALFATLDPSVRRAHTPEGREYTLADTVGFVRRLPTELVEAFRSTLEETAMADL 369
Query: 360 IIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD-AVPPG-----ERVTE 413
I+HVVD SNPD + Q VD TL+ +E E+I V++V NK+D A P + E
Sbjct: 370 ILHVVDGSNPDPMAQVAAVDATLELVEGIEEI--SVMMVVNKIDQASAPALALLRHSLPE 427
Query: 414 EYDLLISATRGTGLAQLKEKVQDMI 438
Y +SA G G+ L++ + D +
Sbjct: 428 AY--YVSARTGEGIEALQQSIADRL 450
>gi|347758039|ref|YP_004865601.1| GTP-binding proten HflX [Micavibrio aeruginosavorus ARL-13]
gi|347590557|gb|AEP09599.1| GTP-binding proten HflX [Micavibrio aeruginosavorus ARL-13]
Length = 440
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 206/415 (49%), Gaps = 36/415 (8%)
Query: 67 SDEFKTIRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRV 126
SD +T DE A+ V+ P + G + + + L E+ L+ +I V
Sbjct: 2 SDSQQTPDDEGPGTAI-------VLHPTLP-GSFARHDRDPEDALEEAVGLIHAI-FMDV 52
Query: 127 VDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVP 186
+S ++ + D + FGKG E++ QV + VFV+ L QQ+ L+ ++V
Sbjct: 53 CESRVVPVRKIDAGALFGKGTREMIAAQVEV-MKPDVVFVN-HALSPVQQRNLEQEWKVK 110
Query: 187 VFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-------- 238
V DR ++++IF A A+TRE ++Q+ +A L Y + R ++ +++ +G
Sbjct: 111 VIDRTGLILEIFGARAQTREGKIQVQLAALEY--QKSRLVKSWSHLERQRGGMGKTGGPG 168
Query: 239 ---LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
L+ R ++ +R +LK+ L ++ R++ R +++ FP V++VGYTN GK+TL
Sbjct: 169 ETQLEIDRRLVTDRITQLKRDLEQISRTRDLQRKGREKVPFPVVSLVGYTNAGKSTLFNR 228
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT + + + FATLD T L + I+ DT+GFI+++PT L+ F+ TLE
Sbjct: 229 LTGAN-VFAEDLPFATLDPTMRRVKLEDGNEIILADTVGFIADLPTHLVASFRATLEQVQ 287
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP----PG--- 408
AD+IIHV D+S D QK V L L +E V+ V NK+DA+ PG
Sbjct: 288 YADVIIHVRDMSRHDRAAQKNDVVSILHDLGIEYASDRRVVEVLNKMDAIAEENRPGILR 347
Query: 409 -ERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG-GSEYQWL 461
R E ISA G G+ L + + M+ A GR +T + G WL
Sbjct: 348 EAREHVENTAAISALTGEGIDDLMQMISRML--AHGRNIVTYHLHPAEGEALAWL 400
>gi|56551244|ref|YP_162083.1| GTP-binding protein HflX [Zymomonas mobilis subsp. mobilis ZM4]
gi|56542818|gb|AAV88972.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis ZM4]
Length = 460
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 215/449 (47%), Gaps = 37/449 (8%)
Query: 73 IRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTII 132
+R EA + G +V +V P ++ KR+T + L E+ L +I G VV
Sbjct: 5 VRSEADGVSHGA--RVLIVLPELE--DNNKRST--EARLEEATGLACAI-GLDVVSKLAF 57
Query: 133 SLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYM 192
L + + FG G +E + R D V V V + + QQ+ L+ V V DR
Sbjct: 58 HLRAPKASTLFGPGQVEQIVTAAR-DEEVDLVIVDGPLTPI-QQRNLETSLDVKVIDRTG 115
Query: 193 IVIQIFKAHAKTREARLQIAIAELPY-------LWT---RYRTIEDATNMNITKGFLDSK 242
++++IF A A T E RLQ+ +A L Y WT R R +
Sbjct: 116 LILEIFGARAATAEGRLQVELAHLDYQAGRLVRTWTHLERQRGGFGFLGGPGETQIEADR 175
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
RM+ +R KL++ L ++ R + R ++++ +P VA+VGYTN GK+TL +T D +
Sbjct: 176 RMI-RDRMAKLRRDLAQVTRTRGLHRARRKKAPWPVVALVGYTNAGKSTLFNRMTGAD-V 233
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
+ ++ LFATLD T + LP + + DT+GF+S++PT L+ F+ TLE+ AD+I+H
Sbjct: 234 MAKDLLFATLDPTMRQITLPGIDKAILSDTVGFVSDLPTQLVAAFRATLEEVTAADLILH 293
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELEE-----KILEHVLVVGNKVDAVP-------PGER 410
V D++ D +++ V+ L + + + V+ NK D + E
Sbjct: 294 VRDIAQEDSESEREDVERVLAEIGIAPVEDGGEFAIPVIEAWNKSDLLSEEAHESLAAEA 353
Query: 411 VTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHT-AVSN 469
+ LISA G G+ L+E V + +A ++I + V + G WL H VS+
Sbjct: 354 ARRDDVALISAWTGEGIEDLRELVSQRLSEAHRLRHIDIPV-TEGQAMAWLYAHGEVVSD 412
Query: 470 IREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
+ D+T + DV M+D +F F
Sbjct: 413 VMNDETG--KMEFDVRMSDENWGRFIERF 439
>gi|434399934|ref|YP_007133938.1| GTP-binding protein HflX [Stanieria cyanosphaera PCC 7437]
gi|428271031|gb|AFZ36972.1| GTP-binding protein HflX [Stanieria cyanosphaera PCC 7437]
Length = 543
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 163/285 (57%), Gaps = 21/285 (7%)
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY------- 223
L Q + L+ F V V DR +++ IF A++R +LQ+ +A+L Y+ R
Sbjct: 250 LSPAQVRNLETQFGVRVVDRTEVILDIFAQRAQSRAGKLQVELAQLEYMLPRLIGRGEAM 309
Query: 224 -RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
R + L+++R + +R +L++ +N+L+ R +R ++Q+Q+ PTVA+
Sbjct: 310 SRLGGGIGTRGPGETKLETERRGIQKRIARLQQDVNQLQAHRSRLRQQRQKQEIPTVAIA 369
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL-----RILYVDTIGFIS 337
GYTN GK+TLI ALT D + +QLFATLD TT ++P+ + IL DT+GFI
Sbjct: 370 GYTNAGKSTLINALTSAD-VYTADQLFATLDPTTRRLVVPDAVTGEARTILLTDTVGFIE 428
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
+P +L++ F+ TLE+ + AD ++HVVD+S+P + Q + V + LQ + + +L+
Sbjct: 429 ELPPSLVDAFRATLEEVIEADALLHVVDLSHPAWENQIRSVMKILQEMPIAPG---PILI 485
Query: 398 VGNKVDAVPPG--ERVTEEYDL--LISATRGTGLAQLKEKVQDMI 438
NK+D V R EE+ L ISA++ GL L++K+ +++
Sbjct: 486 AFNKLDQVDSETLARAREEFPLAVFISASQRFGLETLRQKLGELV 530
>gi|375288840|ref|YP_005123381.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis
3/99-5]
gi|371576129|gb|AEX39732.1| GTP-binding protein hflX [Corynebacterium pseudotuberculosis
3/99-5]
Length = 539
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 175/341 (51%), Gaps = 25/341 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G VVD D ++ G G + LK V T V L Q
Sbjct: 140 AALAETAGSEVVDMLYQKRDKPDPGTYIGSGKVAELKDIVMSTGVDTVVCDGE--LSPGQ 197
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA------ 229
L+ V V DR M+++ IF HAK++E + Q+++A++ YL TR R A
Sbjct: 198 MIALEKALDVKVIDRTMLILDIFAQHAKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAG 257
Query: 230 --TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
N G +++ R L KL+K + +K RE+ R++++ P +A
Sbjct: 258 ERAGSNGGVGLRGPGETKIEADRRRLRSDMAKLRKEIAGMKTAREVKRSQRRESTIPQIA 317
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+ GYTN GK++LI ALTD LV + LFATLD TT L + +++ DT+GF+ ++P
Sbjct: 318 IAGYTNAGKSSLINALTDAGVLV-EDALFATLDPTTRRAELADGRPVVFTDTVGFVRHLP 376
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVV 398
T L+E F+ TLE+ + AD+++HVVD S+P L+Q + V+ + + EL+ + ++VV
Sbjct: 377 TQLVEAFRSTLEEVVGADLVLHVVDGSDPFPLEQIKAVNGVISDIVRELKVEAPPEIIVV 436
Query: 399 GNKVDAVPPGERVTEEYDL----LISATRGTGLAQLKEKVQ 435
NK+D P + L +SA G G+ +L+ +++
Sbjct: 437 -NKIDQADPLVLAELRHALDDVVFVSAQEGDGIPELEARIE 476
>gi|430745768|ref|YP_007204897.1| GTP-binding protein HflX [Singulisphaera acidiphila DSM 18658]
gi|430017488|gb|AGA29202.1| GTP-binding protein HflX [Singulisphaera acidiphila DSM 18658]
Length = 434
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/379 (31%), Positives = 195/379 (51%), Gaps = 27/379 (7%)
Query: 106 TRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVF 165
++D L E + L + G VV S + D ++ G G + LK V +A +
Sbjct: 29 SQDDPLDEIRGLAKT-AGLVVVGSMLQKRQHVDIATYIGSGKVAELKELV--EAHEADLV 85
Query: 166 VSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRT 225
V + L Q + L+ + V V DR +++ IF A+T EA LQ+ +A+L Y R +
Sbjct: 86 VFDNDLGPAQTRNLERILGVKVIDRTEVILDIFATRARTHEAHLQVELAQLEYAMPRLKR 145
Query: 226 IEDATNMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQK 275
+ T+++ KG L+ R +++ R Q LK L K++ ++E R R
Sbjct: 146 M--WTHLSRYKGGIGVRGPGEKQLEEDRRLVVHRIQDLKAKLGKVQARKE--REVAGRSD 201
Query: 276 FPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGF 335
P+V++VGYTN GK+TL+ ALTD V ++LFATLD T L ++L DT+GF
Sbjct: 202 TPSVSLVGYTNAGKSTLMNALTDAGVFV-EDKLFATLDTRTRRWRLNGGGQVLLSDTVGF 260
Query: 336 ISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV 395
I N+P TL+ FK TLE+A AD+++HVVD S+P+ Q + V L+ L L + +
Sbjct: 261 IRNLPHTLVASFKATLEEARQADLLLHVVDASSPEAEMQIRAVKNVLEELGLAD---QPT 317
Query: 396 LVVGNKVDAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMR 450
++V NK D VP + + ISA +G G+ +L++ V++ + + + I
Sbjct: 318 ILVLNKADRVPDRSFLDVLKAHHHDPITISAAQGDGIDRLEQAVRESLHERSLDAEIETG 377
Query: 451 VRSGGSEYQWLMKHTAVSN 469
V + G +L +H + N
Sbjct: 378 VEN-GRVLAYLAQHAQIIN 395
>gi|334564946|ref|ZP_08517937.1| putative GTP-binding protein [Corynebacterium bovis DSM 20582]
Length = 489
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 177/350 (50%), Gaps = 31/350 (8%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
LAE +AL + G V D D +F G G ++ L+ V A V VD
Sbjct: 85 LAELRALAET-AGSEVADMLYQRRDKPDSATFIGSGKVDELRDVV---VETGADTVVVDG 140
Query: 171 -LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA 229
L Q L+ V V DR M+++ IF HAK+RE + Q+A+A++ YL TR R A
Sbjct: 141 ELSPGQMIALEKALDVKVIDRTMLILDIFAQHAKSREGKAQVALAQMEYLITRVRGWGGA 200
Query: 230 --------TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQ 274
N G +++ R L + +L++ + +K R+ R ++
Sbjct: 201 LSRQAGGRAGSNGGVGLRGPGETKIEADRRRLRQDMARLRREIAGMKTARDTKRRRRDES 260
Query: 275 KFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIG 334
P VA+ GYTN GK++LI ALT LV + LFATLD TT L + +++ DT+G
Sbjct: 261 TVPQVAIAGYTNAGKSSLINALTGAGVLV-EDALFATLDPTTRRAELADGRHVVFSDTVG 319
Query: 335 FISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL--ELEEKIL 392
F+ ++PT L+E F+ TLE+ + AD+++HVVD S+P L Q V+ + L E E+
Sbjct: 320 FVRHLPTQLVEAFRSTLEEVLAADVVLHVVDGSDPFPLAQIAAVNSVIGDLVAETGEEAP 379
Query: 393 EHVLVVGNKVDAVPP---GERVTEEYD----LLISATRGTGLAQLKEKVQ 435
++VV NK+D P E + D + +SA G G+ +L+ +++
Sbjct: 380 PEIIVV-NKIDVADPLVLAELRSALADRAEVVFVSAATGEGVDELETRLE 428
>gi|315656846|ref|ZP_07909733.1| GTP-binding protein [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|315492801|gb|EFU82405.1| GTP-binding protein [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 524
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 168/325 (51%), Gaps = 34/325 (10%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVD-VLKLHQQKMLQDLFQVPVFDRYMIVIQ 196
D +F G+G L+ QV A + A V VD L Q++ L+D+ +V V DR +++
Sbjct: 136 DVATFLGRGKAHELQTQV---ATLGADTVIVDDELAPSQRRALEDVVKVKVIDRTALILD 192
Query: 197 IFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI-----------------TKGFL 239
IF HA +RE + Q+ +A+L YL R R ++ + TK L
Sbjct: 193 IFAQHATSREGKAQVELAQLEYLLPRLRGWGESMSRQAGGRAAAGDGIGARGPGETKIEL 252
Query: 240 DSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDD 299
D +R+ +L++ L L RE R ++ P VA+VGYTN GK++L+ L
Sbjct: 253 DRRRIRSRM--ARLRRNLKALAPTREAKRASRKAGGIPAVAIVGYTNAGKSSLLNRLAGA 310
Query: 300 DSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADI 359
+ LV + LFATLD + P DT+GF+ +PT L+E F+ TLE+ +AD+
Sbjct: 311 NLLV-HDALFATLDPSVRRAHTPEGREYTLADTVGFVRRLPTELVEAFRSTLEETAMADL 369
Query: 360 IIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD-AVPPG-----ERVTE 413
I+HVVD SNPD + Q VD TL+ +E E+I V++V NK+D A P + E
Sbjct: 370 ILHVVDGSNPDPMAQVAAVDATLELVEGIEEI--PVMMVVNKIDQASAPALALLRHSLPE 427
Query: 414 EYDLLISATRGTGLAQLKEKVQDMI 438
Y +SA G G+ L++ + D +
Sbjct: 428 AY--YVSARTGKGIEALQQSIADRL 450
>gi|257068243|ref|YP_003154498.1| GTP-binding proten HflX [Brachybacterium faecium DSM 4810]
gi|256559061|gb|ACU84908.1| GTP-binding proten HflX [Brachybacterium faecium DSM 4810]
Length = 521
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 176/371 (47%), Gaps = 39/371 (10%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+D + D +F GKG L V T V+ L Q
Sbjct: 129 AALADTAGSEVLDGVLQRRAHPDPATFLGKGKAAELADLVAASGADT--VVADGELAPGQ 186
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI- 234
++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 187 RRALEDVVKVKVIDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQAG 246
Query: 235 -----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
TK LD +R + +R KL++ + + R R + R + P
Sbjct: 247 GQVGGAGAGMGSRGPGETKIELDRRR--IRDRMSKLRREIKAMAPGRAEQRAHRTRHQVP 304
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
VA+ GYTN GK++L+ LT LV N LFATLD T P+ Y DT+GF+
Sbjct: 305 AVAIAGYTNAGKSSLLNRLTGAGVLV-ENALFATLDPTVRRSTTPDGREFTYADTVGFVR 363
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
++PT L+E F+ TLE+ AD+++HVVD S+PD Q V L ELE + ++V
Sbjct: 364 HLPTQLVEAFRSTLEEVGGADLLLHVVDASHPDPEGQITAVRAVLG--ELEGFDVPEIVV 421
Query: 398 VGNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILKAT---------GR 444
+ NK D P R ++SA G G+ +L+E + + + + R
Sbjct: 422 L-NKADIAEPETIARLRSQVGDSAVVSARTGMGIQELRELIAERLPRPAVEVDVVVPYSR 480
Query: 445 KNITMRVRSGG 455
++ RV S G
Sbjct: 481 GDLVSRVHSTG 491
>gi|398814299|ref|ZP_10572980.1| GTP-binding protein HflX [Brevibacillus sp. BC25]
gi|398036568|gb|EJL29777.1| GTP-binding protein HflX [Brevibacillus sp. BC25]
Length = 430
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 183/361 (50%), Gaps = 15/361 (4%)
Query: 103 RNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVT 162
RN R + E ++ G V+D + D + G G ++ + + R +
Sbjct: 21 RNEERTRLSMEELHELADTAGVEVLDVITQNRDRVDSAWYLGTGKIDEITQ--RAEELDV 78
Query: 163 AVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTR 222
V + D L Q + L +F V DR +++ IF A++RE ++Q+ +A+ YL R
Sbjct: 79 DVIIFNDELSPSQTRNLDKVFDCKVIDRTQLILDIFAGRAQSREGKIQVELAQYNYLLPR 138
Query: 223 Y--------RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQ 274
R + L+S R + +R +LK+ L R++ R ++++
Sbjct: 139 LAGQGKQLSRLGGGIGTRGPGETKLESDRRHIRKRISELKQQLEDTVRTRQLHRERRKKN 198
Query: 275 KFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIG 334
+A+VGYTN GK+T++ LT+ ++L ++LFATLD TT + LP+ L +L DT+G
Sbjct: 199 NVFQIALVGYTNAGKSTILNKLTNANTL-QEDKLFATLDPTTRQLELPSGLDVLLTDTVG 257
Query: 335 FISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEH 394
FI ++PT+L+ F+ TLE AD+I+HVVD +PD+ + VD+ L L+ EE L
Sbjct: 258 FIQDLPTSLVAAFRSTLEGVKEADLILHVVDSHHPDFQVHMEVVDKILSELKAEEIPL-- 315
Query: 395 VLVVGNKVDAVPPGERVTE-EYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRS 453
LVV NK D + G + + +LISA R L QL +++ L++ + + V
Sbjct: 316 -LVVFNKADMLVEGSYLPRADESILISAMRENDLKQLLSRIESFALQSFNEMKLRVPVER 374
Query: 454 G 454
G
Sbjct: 375 G 375
>gi|456967121|gb|EMG08552.1| GTP-binding protein HflX [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 516
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 172/320 (53%), Gaps = 25/320 (7%)
Query: 98 GKKMKRNTTRDFMLA--ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQV 155
G +RN R L+ E K L + + VVD+ I D + GKG LE + +
Sbjct: 127 GVYPERNVGRHPSLSMEELKELCKTAE-VHVVDTFIQRKNRLDPSTVLGKGKLEEI--IL 183
Query: 156 RGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
+ + + V L Q K + D+ + V DR +++ IF +AK+R+ +LQ+ +A+
Sbjct: 184 KAIQKHVELLVFDLELTPSQAKKISDIADIKVIDRTQLILDIFARNAKSRDGKLQVELAQ 243
Query: 216 LPYLWTRYRTIEDATNMN----------ITKGFLDSKRMVLMEREQKLKKALNKLKGQRE 265
L YL R ++D NM+ + L+ + + ER +L+ L LK +RE
Sbjct: 244 LKYLKGRLTELDD--NMSRLTGGIGGRGPGETKLEIGKRRVEERITRLEVELKSLKKRRE 301
Query: 266 MMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL 325
+ R ++++ + P V +VGYTN GK+T + ALT+ + L N+LFATLD TT P
Sbjct: 302 INRRQRKKNELPAVGIVGYTNAGKSTFLNALTNSEVL-SENKLFATLDPTTRRIRFPEER 360
Query: 326 RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL 385
I+ DT+GFI ++P L FK TLE+ +D+++HVVDVSNPDY Q + V++ L+ L
Sbjct: 361 EIIISDTVGFIHDLPPELSNAFKATLEELGDSDLLVHVVDVSNPDYKLQMEAVEKILEEL 420
Query: 386 ELEEKILEHV--LVVGNKVD 403
E L H+ + V NK+D
Sbjct: 421 E-----LSHIPMIQVFNKID 435
>gi|45656474|ref|YP_000560.1| GTP-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|417770732|ref|ZP_12418636.1| GTP-binding protein HflX [Leptospira interrogans serovar Pomona
str. Pomona]
gi|417776061|ref|ZP_12423905.1| GTP-binding protein HflX [Leptospira interrogans str. 2002000621]
gi|418666719|ref|ZP_13228138.1| GTP-binding protein HflX [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|418681483|ref|ZP_13242711.1| GTP-binding protein HflX [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|418703438|ref|ZP_13264324.1| GTP-binding protein HflX [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|418729893|ref|ZP_13288430.1| GTP-binding protein HflX [Leptospira interrogans str. UI 12758]
gi|421084003|ref|ZP_15544868.1| GTP-binding protein HflX [Leptospira santarosai str. HAI1594]
gi|421101059|ref|ZP_15561673.1| GTP-binding protein HflX [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421120617|ref|ZP_15580926.1| GTP-binding protein HflX [Leptospira interrogans str. Brem 329]
gi|421126712|ref|ZP_15586942.1| GTP-binding protein HflX [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421135369|ref|ZP_15595492.1| GTP-binding protein HflX [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|45599709|gb|AAS69197.1| GTP-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|400326805|gb|EJO79066.1| GTP-binding protein HflX [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|409947223|gb|EKN97223.1| GTP-binding protein HflX [Leptospira interrogans serovar Pomona
str. Pomona]
gi|410020439|gb|EKO87241.1| GTP-binding protein HflX [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410346477|gb|EKO97461.1| GTP-binding protein HflX [Leptospira interrogans str. Brem 329]
gi|410368855|gb|EKP24229.1| GTP-binding protein HflX [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410433445|gb|EKP77791.1| GTP-binding protein HflX [Leptospira santarosai str. HAI1594]
gi|410435937|gb|EKP85063.1| GTP-binding protein HflX [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410574265|gb|EKQ37303.1| GTP-binding protein HflX [Leptospira interrogans str. 2002000621]
gi|410757500|gb|EKR19111.1| GTP-binding protein HflX [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|410766985|gb|EKR37666.1| GTP-binding protein HflX [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|410775354|gb|EKR55347.1| GTP-binding protein HflX [Leptospira interrogans str. UI 12758]
gi|455669362|gb|EMF34491.1| GTP-binding protein HflX [Leptospira interrogans serovar Pomona
str. Fox 32256]
gi|455791137|gb|EMF42963.1| GTP-binding protein HflX [Leptospira interrogans serovar Lora str.
TE 1992]
Length = 518
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 171/320 (53%), Gaps = 25/320 (7%)
Query: 98 GKKMKRNTTR--DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQV 155
G +RN R + E K L + + VVD+ I D + GKG LE + +
Sbjct: 129 GVYPERNVGRHPSLSMEELKELCKTAE-VHVVDTFIQRKNRLDPSTVLGKGKLEEI--IL 185
Query: 156 RGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
+ + + V L Q K + D+ + V DR +++ IF +AK+R+ +LQ+ +A+
Sbjct: 186 KAIQKHVELLVFDLELTPSQAKKISDIADIKVIDRTQLILDIFARNAKSRDGKLQVELAQ 245
Query: 216 LPYLWTRYRTIEDATNMN----------ITKGFLDSKRMVLMEREQKLKKALNKLKGQRE 265
L YL R ++D NM+ + L+ + + ER +L+ L LK +RE
Sbjct: 246 LKYLKGRLTELDD--NMSRLTGGIGGRGPGETKLEIGKRRVEERITRLEVELKSLKKRRE 303
Query: 266 MMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL 325
+ R ++++ + P V +VGYTN GK+T + ALT+ + L N+LFATLD TT P
Sbjct: 304 INRRQRKKNELPAVGIVGYTNAGKSTFLNALTNSEVL-SENKLFATLDPTTRRIRFPEER 362
Query: 326 RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL 385
I+ DT+GFI ++P L FK TLE+ +D+++HVVDVSNPDY Q + V++ L+ L
Sbjct: 363 EIIISDTVGFIHDLPPELSNAFKATLEELGDSDLLVHVVDVSNPDYKLQMEAVEKILEEL 422
Query: 386 ELEEKILEHV--LVVGNKVD 403
E L H+ + V NK+D
Sbjct: 423 E-----LSHIPMIQVFNKID 437
>gi|407275605|ref|ZP_11104075.1| GTP-binding protein HflX [Rhodococcus sp. P14]
Length = 482
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 166/322 (51%), Gaps = 25/322 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G E L++ V T + L Q L+ + +V V DR +++ I
Sbjct: 108 DAATYIGSGKAEELRQVVLATGADT--VICDGELTPAQLTALEKIVKVKVIDRTALILDI 165
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HA +RE + Q+++A++ Y+ R R ++ N G +++
Sbjct: 166 FAQHATSREGKAQVSLAQMEYMLPRLRGWGESMSRQAGGRAGSNGGVGLRGPGETKIETD 225
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R + ER KL++ + +K R+ R ++ R + P+VA+VGYTN GK++L+ LT L
Sbjct: 226 RRRIRERMAKLRREIKAMKSVRDTKRTRRMRNRIPSVAIVGYTNAGKSSLLNKLTGSGVL 285
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V +N LFATLD TT LP+ + DT+GF+ ++PT L+E F+ TLE+ AD+++H
Sbjct: 286 V-QNALFATLDPTTRRAELPDGREYVLTDTVGFVRHLPTQLVEAFRSTLEEVTDADLLLH 344
Query: 363 VVDVSNPDYLQQKQHVDETLQH-LELEEKILEHVLVVGNKVDAVPPGERVTEEYDLL--- 418
VVD S+P Q + V E + L + L+V NKVDA P V E LL
Sbjct: 345 VVDGSDPLPTDQIKAVREVITDVLRESDAPPPPELIVVNKVDAADP-LTVAELRALLPDA 403
Query: 419 --ISATRGTGLAQLKEKVQDMI 438
+SA G GL L+E + ++
Sbjct: 404 VFVSARSGAGLDDLREHLAALL 425
>gi|298346688|ref|YP_003719375.1| GTP-binding proten HflX [Mobiluncus curtisii ATCC 43063]
gi|298236749|gb|ADI67881.1| GTP-binding proten HflX [Mobiluncus curtisii ATCC 43063]
Length = 524
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 168/325 (51%), Gaps = 34/325 (10%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVD-VLKLHQQKMLQDLFQVPVFDRYMIVIQ 196
D +F G+G L+ QV A + A V VD L Q++ L+D+ +V V DR +++
Sbjct: 136 DVATFLGRGKAHELQTQV---ATLGADTVIVDDELAPSQRRALEDVVKVKVIDRTALILD 192
Query: 197 IFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI-----------------TKGFL 239
IF HA +RE + Q+ +A+L YL R R ++ + TK L
Sbjct: 193 IFAQHATSREGKAQVELAQLEYLLPRLRGWGESMSRQAGGRAAAGDGIGARGPGETKIEL 252
Query: 240 DSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDD 299
D +R+ +L++ L L RE R ++ P VA+VGYTN GK++L+ L
Sbjct: 253 DRRRIRSRM--ARLRRNLKALAPTREAKRASRKAGGIPAVAIVGYTNAGKSSLLNRLAGA 310
Query: 300 DSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADI 359
+ LV + LFATLD + P DT+GF+ +PT L+E F+ TLE+ +AD+
Sbjct: 311 NLLV-HDALFATLDPSVRRAHTPEGREYTLADTVGFVRRLPTELVEAFRSTLEETAMADL 369
Query: 360 IIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD-AVPPG-----ERVTE 413
I+HVVD SNPD + Q VD TL+ +E E+I V++V NK+D A P + E
Sbjct: 370 ILHVVDGSNPDPMAQVAAVDATLELVEGIEEI--PVMMVVNKIDQASAPALALLRHSLPE 427
Query: 414 EYDLLISATRGTGLAQLKEKVQDMI 438
Y +SA G G+ L++ + D +
Sbjct: 428 AY--YVSARTGEGIEALQQSIADRL 450
>gi|91204564|emb|CAJ70792.1| similar to ATP/GTP-binding protein [Candidatus Kuenenia
stuttgartiensis]
Length = 431
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 179/335 (53%), Gaps = 29/335 (8%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQD 181
G V+ + I D + GKG EL K V DA V + D L Q K L+
Sbjct: 45 GANVIYTVIQKRAHIDPLYYIGKGKAQELQKIAVEMDA---DVLICDDNLTPAQVKNLEK 101
Query: 182 LFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWTRYRTIEDATNMNI 234
+ + V DR +++ IF AKT +A+LQ+ +A+L Y +WT IE
Sbjct: 102 IIEKKVIDRSELILDIFATRAKTHQAKLQVELAQLEYTKPRLKRMWTHLSRIEGGIG--- 158
Query: 235 TKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKT 290
T+G L+ ++ + LKK L +++ +++ R R++F TV++VGYTN GK+
Sbjct: 159 TRGPGEKQLEVDNRIVSRKIHDLKKRLGEIEKRQQ--RVVASRKEFSTVSIVGYTNAGKS 216
Query: 291 TLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVT 350
TL+ ALTD D++V ++LFATLD T L N IL DT+GFI +P L+ FK T
Sbjct: 217 TLMNALTDVDAMV-EDKLFATLDTKTGICKLENSKNILISDTVGFIQKLPHYLVSSFKAT 275
Query: 351 LEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA-----V 405
LE+ ADI++HV D+S+P +Q + V+ L+ L E+K ++V NK+DA V
Sbjct: 276 LEETRNADILLHVADISSPHIHKQIESVNIVLKELGCEKK---PTIIVLNKIDALKDESV 332
Query: 406 PPGERVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
P + + ++ISA G+ LK+K+ +++ K
Sbjct: 333 IPLLKNRYKNCIVISAKTCQGIPALKQKIAEILEK 367
>gi|284032597|ref|YP_003382528.1| GTP-binding proten HflX [Kribbella flavida DSM 17836]
gi|283811890|gb|ADB33729.1| GTP-binding proten HflX [Kribbella flavida DSM 17836]
Length = 496
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 187/376 (49%), Gaps = 38/376 (10%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
LAE K L++ G V+D I D +F G G + L+ V A + A V D
Sbjct: 95 LAELK-LLAETAGSEVLDGVIQRRKKPDPATFIGSGKVSDLRNLV---ASLGADTVIADG 150
Query: 171 -LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYR----- 224
L Q + L+D +V V DR +++ IF HAK++E + Q+ +A+L Y+ R R
Sbjct: 151 ELAPAQLRNLEDKLKVKVVDRTALILDIFAQHAKSKEGKAQVELAQLQYMKQRLRGWGGN 210
Query: 225 -----------TIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQR 273
+ +++ R + + KL++ L ++KG R MR +++R
Sbjct: 211 LSRQAGGRVGAAGGGIGGRGPGETKIETDRRRINTKISKLRRELKEMKGTRTTMRQERRR 270
Query: 274 QKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTI 333
P+VA+ GYTN GK++L+ A+T LV N LFATLD TT + + + DT+
Sbjct: 271 HSVPSVAIAGYTNAGKSSLLNAITGAGVLV-ENALFATLDPTTRKTTTADGRVYTFTDTV 329
Query: 334 GFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILE 393
GF+ ++P ++E F+ TLE+ AD+++HVVD S+PD L Q Q V E L E+ +
Sbjct: 330 GFVRHLPHDIVEAFRSTLEEVADADLLLHVVDGSHPDPLAQIQAVREVLH--EIGATDVP 387
Query: 394 HVLVVGNKVDAVPPGERVT----EEYDLLISATRGTGLAQLKEKVQDMI---------LK 440
++V+ NK D P E +++SA G G+ +L+ +V+ + L
Sbjct: 388 EIIVI-NKGDVADPMALAPILHRETGAIVVSARTGEGIDKLRAQVEAALPQPHITVDALL 446
Query: 441 ATGRKNITMRVRSGGS 456
R ++ RV S GS
Sbjct: 447 PYDRGDLVSRVHSEGS 462
>gi|418691381|ref|ZP_13252480.1| GTP-binding protein HflX [Leptospira interrogans str. FPW2026]
gi|400359559|gb|EJP15548.1| GTP-binding protein HflX [Leptospira interrogans str. FPW2026]
Length = 518
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 171/320 (53%), Gaps = 25/320 (7%)
Query: 98 GKKMKRNTTR--DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQV 155
G +RN R + E K L + + VVD+ I D + GKG LE + +
Sbjct: 129 GVYPERNVGRHPSLSMEELKELCKTAE-VHVVDTFIQRKNRLDPSTVLGKGKLEEI--IL 185
Query: 156 RGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
+ + + V L Q K + D+ + V DR +++ IF +AK+R+ +LQ+ +A+
Sbjct: 186 KAIQKHVELLVFDLELTPSQAKKISDIADIKVIDRTQLILDIFARNAKSRDGKLQVELAQ 245
Query: 216 LPYLWTRYRTIEDATNMN----------ITKGFLDSKRMVLMEREQKLKKALNKLKGQRE 265
L YL R ++D NM+ + L+ + + ER +L+ L LK +RE
Sbjct: 246 LKYLKGRLTELDD--NMSRLTGGIGGRGPGETKLEIGKRRVEERITRLEVELKSLKKRRE 303
Query: 266 MMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL 325
+ R ++++ + P V +VGYTN GK+T + ALT+ + L N+LFATLD TT P
Sbjct: 304 INRRQRKKNELPAVGIVGYTNAGKSTFLNALTNSEVL-SENKLFATLDPTTRRIRFPEER 362
Query: 326 RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL 385
I+ DT+GFI ++P L FK TLE+ +D+++HVVDVSNPDY Q + V++ L+ L
Sbjct: 363 EIIISDTVGFIHDLPPELSNAFKATLEELGDSDLLVHVVDVSNPDYKLQMEAVEKILEEL 422
Query: 386 ELEEKILEHV--LVVGNKVD 403
E L H+ + V NK+D
Sbjct: 423 E-----LSHIPMIQVFNKID 437
>gi|407716810|ref|YP_006838090.1| GTP-binding subunit of protease specific for phage lambda cII
repressor [Cycloclasticus sp. P1]
gi|407257146|gb|AFT67587.1| GTP-binding subunit of protease specific for phage lambda cII
repressor [Cycloclasticus sp. P1]
Length = 419
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 179/331 (54%), Gaps = 24/331 (7%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D + F GKG L+ +K Q+ +F L QQ+ L+ +V V DR +++
Sbjct: 53 SPDARFFVGKGKLDEVKHQLHETCADIVLFNHT--LSPSQQRNLEKELEVRVLDRTNLIL 110
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMV 245
IF A++ E +LQ+ +A+L +L TR I T++ KG L++ R +
Sbjct: 111 DIFAQRAQSFEGKLQVELAQLQHLSTRL--IRGWTHLERQKGGIGLRGPGETQLETDRRL 168
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR 305
+ +R +++K L K+ QR+ R +QR PTV++VGYTN GK+TL LT+ ++
Sbjct: 169 IGQRIRQIKTRLTKVNKQRDQGRRSRQRADVPTVSLVGYTNAGKSTLFNVLTNS-AIYAA 227
Query: 306 NQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVD 365
+QLFATLD T + LP+ ++ DT+GFI N+P L+ F+ TL++ + AD+++HVVD
Sbjct: 228 DQLFATLDPTLRQVKLPDYGELVLADTVGFIQNLPHELVAAFRSTLQETIEADLLLHVVD 287
Query: 366 VSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT--EEYD----LLI 419
S+P+ +Q V+ L+ E+ + V+V NK+D +P + +E D + +
Sbjct: 288 ASSPNRQEQIHEVNSVLK--EIGADNIPQVMVY-NKIDCLPAVDAHVDKDETDSVNAVWL 344
Query: 420 SATRGTGLAQLKEKVQDMILKATGRKNITMR 450
SA G G+ L E + + R ++ ++
Sbjct: 345 SAMDGDGINLLLETLSTLCHDENTRMSVVLK 375
>gi|367476723|ref|ZP_09476098.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 285]
gi|365270919|emb|CCD88566.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 285]
Length = 458
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 205/412 (49%), Gaps = 36/412 (8%)
Query: 84 TDHQVFVVQPFIKW----GKKMKRNTTRDF--MLAESKALVSSIQGWRVVDSTIISLLSF 137
T +V VV P+++ ++ RD + E+ L +I V +S + +
Sbjct: 20 TTGRVIVVGPYLRTRPGDDGAASQSDMRDVEARIDEAAGLARAIN-LTVAESILALIGQI 78
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQ 196
++ GKG ++ + + G A V +D L QQ+ L+ + V DR ++++
Sbjct: 79 RPATYLGKGKVDEIAGVIAGQG---AELVVMDCALSPIQQRNLEKAWNTKVLDRTGLILE 135
Query: 197 IFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMV 245
IF AKT+E LQ+ +A L Y R R + T++ +G +++ R +
Sbjct: 136 IFGRRAKTKEGALQVELAHLNY--QRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRL 193
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR 305
+ +R +L+ L K++ R + R +QR + VA+VGYTN GK+TL LT D +
Sbjct: 194 IGDRITRLENELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRAD-VQAA 252
Query: 306 NQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVD 365
+ LFATLD T LP+ + + DT+GFISN+PT L+ F+ TLE+ + AD+I+HV D
Sbjct: 253 DMLFATLDPTLRAISLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEADVILHVRD 312
Query: 366 VSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD----------AVPPGERVTEEY 415
+S+ D Q+ V+ L L ++ + + ++ V NK+D A R E
Sbjct: 313 MSHEDAEAQQHDVELVLSQLGIDPEATDSIIEVWNKIDRLDEAARENLANIAARRPPERP 372
Query: 416 DLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
L++SA G G+ L + ++D + A ++T+ + G+ WL ++ V
Sbjct: 373 CLMVSAETGEGVDVLLQAIEDRLAAARTTLDLTIDA-ADGAGISWLHRNAEV 423
>gi|417763860|ref|ZP_12411835.1| GTP-binding protein HflX [Leptospira interrogans str. 2002000624]
gi|417784286|ref|ZP_12431994.1| GTP-binding protein HflX [Leptospira interrogans str. C10069]
gi|418672197|ref|ZP_13233539.1| GTP-binding protein HflX [Leptospira interrogans str. 2002000623]
gi|418700582|ref|ZP_13261524.1| GTP-binding protein HflX [Leptospira interrogans serovar Bataviae
str. L1111]
gi|418708377|ref|ZP_13269183.1| GTP-binding protein HflX [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|421115322|ref|ZP_15575730.1| GTP-binding protein HflX [Leptospira interrogans serovar Canicola
str. Fiocruz LV133]
gi|409940336|gb|EKN85978.1| GTP-binding protein HflX [Leptospira interrogans str. 2002000624]
gi|409952546|gb|EKO07057.1| GTP-binding protein HflX [Leptospira interrogans str. C10069]
gi|410013100|gb|EKO71183.1| GTP-binding protein HflX [Leptospira interrogans serovar Canicola
str. Fiocruz LV133]
gi|410580801|gb|EKQ48620.1| GTP-binding protein HflX [Leptospira interrogans str. 2002000623]
gi|410760483|gb|EKR26679.1| GTP-binding protein HflX [Leptospira interrogans serovar Bataviae
str. L1111]
gi|410771380|gb|EKR46587.1| GTP-binding protein HflX [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|456987870|gb|EMG23078.1| GTP-binding protein HflX [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 516
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 172/320 (53%), Gaps = 25/320 (7%)
Query: 98 GKKMKRNTTRDFMLA--ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQV 155
G +RN R L+ E K L + + VVD+ I D + GKG LE + +
Sbjct: 127 GVYPERNVGRHPSLSMEELKELCKTAE-VHVVDTFIQRKNRLDPSTVLGKGKLEEI--IL 183
Query: 156 RGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
+ + + V L Q K + D+ + V DR +++ IF +AK+R+ +LQ+ +A+
Sbjct: 184 KAIQKHVELLVFDLELTPSQAKKISDIADIKVIDRTQLILDIFARNAKSRDGKLQVELAQ 243
Query: 216 LPYLWTRYRTIEDATNMN----------ITKGFLDSKRMVLMEREQKLKKALNKLKGQRE 265
L YL R ++D NM+ + L+ + + ER +L+ L LK +RE
Sbjct: 244 LKYLKGRLTELDD--NMSRLTGGIGGRGPGETKLEIGKRRVEERITRLEVELKSLKKRRE 301
Query: 266 MMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL 325
+ R ++++ + P V +VGYTN GK+T + ALT+ + L N+LFATLD TT P
Sbjct: 302 INRRQRKKNELPAVGIVGYTNAGKSTFLNALTNSEVL-SENKLFATLDPTTRRIRFPEER 360
Query: 326 RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL 385
I+ DT+GFI ++P L FK TLE+ +D+++HVVDVSNPDY Q + V++ L+ L
Sbjct: 361 EIIISDTVGFIHDLPPELSNAFKATLEELGDSDLLVHVVDVSNPDYKLQMEAVEKILEEL 420
Query: 386 ELEEKILEHV--LVVGNKVD 403
E L H+ + V NK+D
Sbjct: 421 E-----LSHIPMIQVFNKID 435
>gi|418712422|ref|ZP_13273163.1| GTP-binding protein HflX [Leptospira interrogans str. UI 08452]
gi|410791179|gb|EKR84859.1| GTP-binding protein HflX [Leptospira interrogans str. UI 08452]
Length = 518
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 172/320 (53%), Gaps = 25/320 (7%)
Query: 98 GKKMKRNTTRDFMLA--ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQV 155
G +RN R L+ E K L + + VVD+ I D + GKG LE + +
Sbjct: 129 GVYPERNVGRHPSLSMEELKELCKTAE-VHVVDTFIQRKNRLDPSTVLGKGKLEEI--IL 185
Query: 156 RGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
+ + + V L Q K + D+ + V DR +++ IF +AK+R+ +LQ+ +A+
Sbjct: 186 KAIQKHVELLVFDLELTPSQAKKISDIADIKVIDRTQLILDIFARNAKSRDGKLQVELAQ 245
Query: 216 LPYLWTRYRTIEDATNMN----------ITKGFLDSKRMVLMEREQKLKKALNKLKGQRE 265
L YL R ++D NM+ + L+ + + ER +L+ L LK +RE
Sbjct: 246 LKYLKGRLTELDD--NMSRLTGGIGGRGPGETKLEIGKRRVEERITRLEVELKSLKKRRE 303
Query: 266 MMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL 325
+ R ++++ + P V +VGYTN GK+T + ALT+ + L N+LFATLD TT P
Sbjct: 304 INRRQRKKNELPAVGIVGYTNAGKSTFLNALTNSEVL-SENKLFATLDPTTRRIRFPEER 362
Query: 326 RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL 385
I+ DT+GFI ++P L FK TLE+ +D+++HVVDVSNPDY Q + V++ L+ L
Sbjct: 363 EIIISDTVGFIHDLPPELSNAFKATLEELGDSDLLVHVVDVSNPDYKLQMEAVEKILEEL 422
Query: 386 ELEEKILEHV--LVVGNKVD 403
E L H+ + V NK+D
Sbjct: 423 E-----LSHIPMIQVFNKID 437
>gi|365154960|ref|ZP_09351356.1| GTP-binding protein HflX [Bacillus smithii 7_3_47FAA]
gi|363628885|gb|EHL79586.1| GTP-binding protein HflX [Bacillus smithii 7_3_47FAA]
Length = 426
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 186/354 (52%), Gaps = 22/354 (6%)
Query: 109 FMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSV 168
+ L E +L + +G VV + D ++ GKG LE LK V +F
Sbjct: 33 YSLEELASLTHTAEG-EVVCTITQKRDRIDPSTYIGKGKLEELKHLVEELEPDVVIFN-- 89
Query: 169 DVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY----- 223
D L Q + L D ++ + DR +++ IF A+++E +LQ+ +A+L YL R
Sbjct: 90 DELTPSQIRHLTDTLRIRIIDRTQLILDIFARRARSKEGKLQVELAQLEYLLPRLSGRGT 149
Query: 224 ---RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
R + L+S R + R +K+ L + RE R+++++ +A
Sbjct: 150 ELSRLGGGIGTRGPGETKLESDRRHIRRRIHDIKEQLQSVVHHRERYRSRRKKNHTFRIA 209
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+VGYTN GK+TL LT SL NQLFATLD T + LP+ L DT+GFI ++P
Sbjct: 210 LVGYTNAGKSTLFNRLTTGGSL-EENQLFATLDPLTKKMTLPSGFTSLLSDTVGFIQDLP 268
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
TTL+ F+ TLE+ AD+++HVVD SNPDYLQ ++ V++ L L+++E L +LV N
Sbjct: 269 TTLVAAFRSTLEEVREADLLLHVVDSSNPDYLQHEETVNQLLAQLDMDE--LPRLLVY-N 325
Query: 401 KVDAVPPG-ERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRS 453
K+D G V+++ ++ISA +LK K++ ++ KN+ + R+
Sbjct: 326 KIDQKCSGFVPVSKDDHIMISALSEEDRTRLKIKIEQVM------KNLMIPFRA 373
>gi|114330965|ref|YP_747187.1| small GTP-binding protein [Nitrosomonas eutropha C91]
gi|114307979|gb|ABI59222.1| GTP-binding protein HflX [Nitrosomonas eutropha C91]
Length = 377
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 169/314 (53%), Gaps = 25/314 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D +F GKG +E + + V +F L QQ+ L + DR +++ I
Sbjct: 54 DPATFIGKGKVEEISQIVVQTQAAMVIFNHE--LSPIQQRNLSTALACRIIDRTSLILDI 111
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLM 247
F AK+ E +LQ+ +A+L YL TR + T++ KG L++ R +L
Sbjct: 112 FAQRAKSHEGKLQVELAQLEYLSTRL--VRGWTHLERQKGGIGLRGPGETQLETDRRLLA 169
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
+R + LK+ L KLK QR++ R ++R + +V++VGYTN GK+TL L D+ ++
Sbjct: 170 KRVKFLKEKLAKLKQQRDVQRRARKRSEIMSVSIVGYTNAGKSTLFNRLVRSDAYAA-DK 228
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD TT LP R I+ DT+GFI ++P TL+ F+ TLE+ + AD+++HVVDVS
Sbjct: 229 LFATLDTTTRRLFLPERGLIVISDTVGFIRDLPHTLVAAFRATLEETIQADLLLHVVDVS 288
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER---VTEEYDLL----IS 420
+ + Q V++ LQ E+ + +L++ NK+D + G + +EY + +S
Sbjct: 289 SSNRDVQISEVNKLLQ--EIGADTIPQILIL-NKIDLIEQGSSENYMRDEYGRIARIHLS 345
Query: 421 ATRGTGLAQLKEKV 434
A G G L E +
Sbjct: 346 ARTGAGFGYLYEAL 359
>gi|24216333|ref|NP_713814.1| GTP-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|386075356|ref|YP_005989676.1| GTP-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|418723233|ref|ZP_13282075.1| GTP-binding protein HflX [Leptospira interrogans str. UI 12621]
gi|24197609|gb|AAN50832.1|AE011519_1 GTP-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|353459148|gb|AER03693.1| GTP-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|409963359|gb|EKO27085.1| GTP-binding protein HflX [Leptospira interrogans str. UI 12621]
gi|456823010|gb|EMF71480.1| GTP-binding protein HflX [Leptospira interrogans serovar Canicola
str. LT1962]
Length = 518
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 171/320 (53%), Gaps = 25/320 (7%)
Query: 98 GKKMKRNTTR--DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQV 155
G +RN R + E K L + + VVD+ I D + GKG LE + +
Sbjct: 129 GVYPERNVGRHPSLSMEELKELCKTAE-VHVVDTFIQRKNRLDPSTVLGKGKLEEI--IL 185
Query: 156 RGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
+ + + V L Q K + D+ + V DR +++ IF +AK+R+ +LQ+ +A+
Sbjct: 186 KAIQKHVELLVFDLELTPSQAKKISDIADIKVIDRTQLILDIFARNAKSRDGKLQVELAQ 245
Query: 216 LPYLWTRYRTIEDATNMN----------ITKGFLDSKRMVLMEREQKLKKALNKLKGQRE 265
L YL R ++D NM+ + L+ + + ER +L+ L LK +RE
Sbjct: 246 LKYLKGRLTELDD--NMSRLTGGIGGRGPGETKLEIGKRRVEERITRLEVELKSLKKRRE 303
Query: 266 MMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL 325
+ R ++++ + P V +VGYTN GK+T + ALT+ + L N+LFATLD TT P
Sbjct: 304 INRRQRKKNELPAVGIVGYTNAGKSTFLNALTNSEVL-SENKLFATLDPTTRRIRFPEER 362
Query: 326 RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL 385
I+ DT+GFI ++P L FK TLE+ +D+++HVVDVSNPDY Q + V++ L+ L
Sbjct: 363 EIIISDTVGFIHDLPPELSNAFKATLEELGDSDLLVHVVDVSNPDYKLQMEAVEKILEEL 422
Query: 386 ELEEKILEHV--LVVGNKVD 403
E L H+ + V NK+D
Sbjct: 423 E-----LSHIPMIQVFNKID 437
>gi|332185025|ref|ZP_08386774.1| GTP-binding protein HflX [Sphingomonas sp. S17]
gi|332014749|gb|EGI56805.1| GTP-binding protein HflX [Sphingomonas sp. S17]
Length = 430
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 184/374 (49%), Gaps = 25/374 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E+ L +I G VV+ + + S + G G +E + +QVR + VF
Sbjct: 36 LDETAGLAMAI-GLDVVERIALRVRSPKPATLIGSGQVEQVAQQVRMEEAQLVVFDGS-- 92
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT-- 221
L QQ+ L+ + V DR ++++IF A T E RLQ+ +A L Y WT
Sbjct: 93 LTPVQQRNLETTLEAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVRSWTHL 152
Query: 222 -RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
R R +RM+ +R +L++ L+++ R + R+++QR +P +A
Sbjct: 153 ERQRGGFGFLGGPGETQIEADRRMI-RDRMARLRRELDQVSRTRGLHRDRRQRAPWPIIA 211
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+VGYTN GK+TL LT ++ ++ LFATLD T + LP + + DT+GF+S++P
Sbjct: 212 LVGYTNAGKSTLFNRLTGA-HVMAKDLLFATLDPTLRQIQLPGIDKAILSDTVGFVSDLP 270
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
T L+ FK TLE+ + AD++IHV D+++PD Q+ V+ L + ++ + N
Sbjct: 271 TQLVAAFKATLEEVVSADLLIHVRDIAHPDSEAQRADVEAVLTEIGVDPETPR--FEAWN 328
Query: 401 KVDAVPP-------GERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRS 453
K+D V E + + +SA G G+ QL E+V + R IT+
Sbjct: 329 KIDLVEGELREDLLAEAGRRPHIVAVSAMSGEGIDQLVEQVAAALTSGHRRYWITLDA-G 387
Query: 454 GGSEYQWLMKHTAV 467
G+ WL H V
Sbjct: 388 DGAGAAWLHAHGEV 401
>gi|212704395|ref|ZP_03312523.1| hypothetical protein DESPIG_02450 [Desulfovibrio piger ATCC 29098]
gi|212672116|gb|EEB32599.1| GTP-binding protein HflX [Desulfovibrio piger ATCC 29098]
Length = 544
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 175/337 (51%), Gaps = 20/337 (5%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLH 174
A ++ G V + + + K GKG + EL + G A + +LH
Sbjct: 196 AELARTAGLAVAGRMVQRVAQVNPKFILGKGKMAELEVLALEGRAGTLVFDGELSPAQLH 255
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTI 226
L D+ + V DR +++ IF HA TR +LQ+ +A+L Y R R +
Sbjct: 256 N---LADITERKVLDRTQLILDIFAQHAVTRAGKLQVELAQLRYTQPRLTGKNRAMDRLM 312
Query: 227 EDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTN 286
+ L++ R ER +L+K L++L+ QR R+++ R+ P A+VGYTN
Sbjct: 313 GGIGGRGPGETKLETDRRRSRERMARLRKELDQLRRQRAFTRSRRARRGIPMAALVGYTN 372
Query: 287 CGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEP 346
GK+TL+ LT + L N+LFATLD TT P I+ DT+GFI N+P L++
Sbjct: 373 AGKSTLLNNLTRSEVLA-ENKLFATLDPTTRRLRFPAEREIILADTVGFIRNLPKELMDA 431
Query: 347 FKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA-- 404
F+ TLE+ AD+++HV D S+PD LQQ V+ L+ LEL+ + +L++ NK D
Sbjct: 432 FRATLEELESADLLVHVADASHPDLLQQITSVETILEELELQH--MPRILLL-NKWDLLD 488
Query: 405 VPPGERVTEEYD--LLISATRGTGLAQLKEKVQDMIL 439
VP + + + + ISA G GL +L E +++M+L
Sbjct: 489 VPARAELADAFPHAIPISARTGDGLKRLLEVLENMLL 525
>gi|417767517|ref|ZP_12415457.1| GTP-binding protein HflX [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|400350023|gb|EJP02305.1| GTP-binding protein HflX [Leptospira interrogans serovar Bulgarica
str. Mallika]
Length = 517
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 171/320 (53%), Gaps = 25/320 (7%)
Query: 98 GKKMKRNTTR--DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQV 155
G +RN R + E K L + + VVD+ I D + GKG LE + +
Sbjct: 128 GVYPERNVGRHPSLSMEELKELCKTAE-VHVVDTFIQRKNRLDPSTVLGKGKLEEI--IL 184
Query: 156 RGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
+ + + V L Q K + D+ + V DR +++ IF +AK+R+ +LQ+ +A+
Sbjct: 185 KAIQKHVELLVFDLELTPSQAKKISDIADIKVIDRTQLILDIFARNAKSRDGKLQVELAQ 244
Query: 216 LPYLWTRYRTIEDATNMN----------ITKGFLDSKRMVLMEREQKLKKALNKLKGQRE 265
L YL R ++D NM+ + L+ + + ER +L+ L LK +RE
Sbjct: 245 LKYLKGRLTELDD--NMSRLTGGIGGRGPGETKLEIGKRRVEERITRLEVELKSLKKRRE 302
Query: 266 MMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL 325
+ R ++++ + P V +VGYTN GK+T + ALT+ + L N+LFATLD TT P
Sbjct: 303 INRRQRKKNELPAVGIVGYTNAGKSTFLNALTNSEVL-SENKLFATLDPTTRRIRFPEER 361
Query: 326 RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL 385
I+ DT+GFI ++P L FK TLE+ +D+++HVVDVSNPDY Q + V++ L+ L
Sbjct: 362 EIIISDTVGFIHDLPPELSNAFKATLEELGDSDLLVHVVDVSNPDYKLQMEAVEKILEEL 421
Query: 386 ELEEKILEHV--LVVGNKVD 403
E L H+ + V NK+D
Sbjct: 422 E-----LSHIPMIQVFNKID 436
>gi|288920757|ref|ZP_06415057.1| GTP-binding proten HflX [Frankia sp. EUN1f]
gi|288347833|gb|EFC82110.1| GTP-binding proten HflX [Frankia sp. EUN1f]
Length = 502
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 174/342 (50%), Gaps = 26/342 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A +++ G V+D+ + D +F G G L V A A V D L
Sbjct: 105 AALATTAGSMVLDALVQRRDRPDTATFVGSGKARELAEVV---ASTGADTVICDGELTPG 161
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q + L+++ +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R ++ +
Sbjct: 162 QLRQLEEVVKVKVIDRTALILDIFAQHATSREGKAQVELAQLQYMLPRLRGWGESMSRAA 221
Query: 235 ----------TKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
T+G ++K R L R KL++ L + RE R+ ++R P VA
Sbjct: 222 ASSGGRAPIGTRGPGETKIETDRRRLRTRMAKLRRELAAMATVRETKRSSRRRGAVPAVA 281
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+ GYTN GK++L+ LT LV + LFATLD T LP+ DT+GF+ ++P
Sbjct: 282 IAGYTNAGKSSLLNRLTGAGVLV-EDALFATLDPTVRRATLPDGRVFTLADTVGFVRHLP 340
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
++E F+ TLE+ + AD+++HVVD S PD + Q V E L ++ + E LVV N
Sbjct: 341 HQIVEAFRSTLEEVVDADLVLHVVDGSAPDPMGQITAVREVLAEID-AAGVPE--LVVVN 397
Query: 401 KVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMI 438
KVDAV P R + +SA GTGLA+L + + + I
Sbjct: 398 KVDAVDPTTLAVLRKAVPDAIFVSARSGTGLAELVDALSERI 439
>gi|46191061|ref|ZP_00120704.2| COG2262: GTPases [Bifidobacterium longum DJO10A]
gi|189439027|ref|YP_001954108.1| GTPase [Bifidobacterium longum DJO10A]
gi|312132467|ref|YP_003999806.1| hflx [Bifidobacterium longum subsp. longum BBMN68]
gi|189427462|gb|ACD97610.1| GTPase [Bifidobacterium longum DJO10A]
gi|311773394|gb|ADQ02882.1| HflX [Bifidobacterium longum subsp. longum BBMN68]
Length = 501
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 174/363 (47%), Gaps = 28/363 (7%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR 156
W + + L E AL + G V D + D ++ G G + + V
Sbjct: 88 WSSAVTTQAKAEESLRELAALAET-AGAVVCDGLLQHRSKPDAATYVGSGKAKEIADIV- 145
Query: 157 GDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
AR A + VD L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+
Sbjct: 146 --AREEADTIIVDDDLPPSQRRALEDAAKVKVVDRTAVILDIFAQHATSREGKAQVELAQ 203
Query: 216 LPYLWTRYR------------TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNK 259
L Y+ R R A ++G ++K R V+ R +L++ + +
Sbjct: 204 LEYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRTRIARLRRQIRE 263
Query: 260 LKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEG 319
+ RE+ R ++R PTVAVVGYTN GK++L LT LV N LFATLD
Sbjct: 264 MAPAREVKRGSRRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRA 322
Query: 320 MLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVD 379
+ YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q V+
Sbjct: 323 KTRDGRAYAYVDTVGFVRRLPTQLVEAFKSTLEEVAEADVILHVVDGSHPDPFSQVDAVN 382
Query: 380 ETLQHLELEEKILEHVLVVGNKVDAVPPGER----VTEEYDLLISATRGTGLAQLKEKVQ 435
+ L +E I ++V NK D R + ++SA G GL +L+ V+
Sbjct: 383 DVLADIEGTASIPR--ILVFNKADQADEATRERLAALQPDAFIVSAYTGEGLDELRTAVE 440
Query: 436 DMI 438
++
Sbjct: 441 SLL 443
>gi|377559206|ref|ZP_09788766.1| GTP-binding protein HflX [Gordonia otitidis NBRC 100426]
gi|377523664|dbj|GAB33931.1| GTP-binding protein HflX [Gordonia otitidis NBRC 100426]
Length = 520
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 187/371 (50%), Gaps = 40/371 (10%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E A ++ G V+++ I S D ++ G G + L R V D V + L
Sbjct: 110 EELAALAETAGSAVLEAVIQRRSSPDPATYIGSGKAQEL-RDVVADTGADTVICDGE-LT 167
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA--- 229
Q L+ + +V V DR +++ IF HA +RE + Q+A+A++ Y+ R R ++
Sbjct: 168 PAQLTALEKVVKVKVIDRTALILDIFAQHASSREGKAQVALAQMEYMLPRLRGWGESMSR 227
Query: 230 -----TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
N G +++ R + ER KL++ + +++ R R+ + R P
Sbjct: 228 QAGGRAGSNGGVGLRGPGETKIETDRRRIRERMAKLRRQIREMRTARVTKRSARLRGSVP 287
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+AV GYTN GK++L+ A+T LV ++ LFATLD TT L + +++ DT+GF+
Sbjct: 288 RIAVAGYTNAGKSSLVNAMTGSGVLV-QDALFATLDPTTRRATLDDGRELVFTDTVGFVR 346
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV-L 396
++PT L+E F+ TLE+ + AD+++HVVD S+P +Q V + + EE + L
Sbjct: 347 HLPTQLVEAFRSTLEEVVDADLVLHVVDGSDPFPAEQITAVRRVINDVVAEEGVAPPPEL 406
Query: 397 VVGNKVDAVPPGERVTEEYDLL----------------ISATRGTGLAQLKEKVQDMILK 440
+V NK+DA+ R+TE +L +SA G GL +L E V++ +
Sbjct: 407 LVINKIDAI-DASRLTELRAMLGAGGSTHGPNSAGVVFVSARTGEGLPELFETVREFV-- 463
Query: 441 ATGRKNITMRV 451
GR ++ + V
Sbjct: 464 --GRDDVELVV 472
>gi|296454449|ref|YP_003661592.1| small GTP-binding protein [Bifidobacterium longum subsp. longum
JDM301]
gi|296183880|gb|ADH00762.1| small GTP-binding protein [Bifidobacterium longum subsp. longum
JDM301]
Length = 501
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 174/363 (47%), Gaps = 28/363 (7%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR 156
W + + L E AL + G V D + D ++ G G + + V
Sbjct: 88 WSSAVTTQAKAEESLRELAALAET-AGAVVCDGLLQHRSKPDAATYVGSGKAKEIADIV- 145
Query: 157 GDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
AR A + VD L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+
Sbjct: 146 --AREEADTIIVDDDLPPSQRRALEDAAKVKVVDRTAVILDIFAQHATSREGKAQVELAQ 203
Query: 216 LPYLWTRYR------------TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNK 259
L Y+ R R A ++G ++K R V+ R +L++ + +
Sbjct: 204 LEYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRTRIARLRRQIRE 263
Query: 260 LKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEG 319
+ RE+ R ++R PTVAVVGYTN GK++L LT LV N LFATLD
Sbjct: 264 MAPAREVKRGSRRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRA 322
Query: 320 MLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVD 379
+ YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q V+
Sbjct: 323 KTRDGRAYAYVDTVGFVRRLPTQLIEAFKSTLEEVAEADVILHVVDGSHPDPFSQVDAVN 382
Query: 380 ETLQHLELEEKILEHVLVVGNKVDAVPPGER----VTEEYDLLISATRGTGLAQLKEKVQ 435
+ L +E I ++V NK D R + ++SA G GL +L+ V+
Sbjct: 383 DVLADIEGTASIPR--ILVFNKADQADEATRERLAALQPDAFIVSAYTGEGLDELRTAVE 440
Query: 436 DMI 438
++
Sbjct: 441 SLL 443
>gi|398335563|ref|ZP_10520268.1| GTPase [Leptospira kmetyi serovar Malaysia str. Bejo-Iso9]
Length = 523
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 172/320 (53%), Gaps = 25/320 (7%)
Query: 98 GKKMKRNTTR--DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQV 155
G +RN R + + E K L + + VVD+ + D + GKG LE + +
Sbjct: 129 GVYPERNVGRHPNLSMEELKELCRTAE-VHVVDTFMQRKNRLDPSTVLGKGKLEEI--IL 185
Query: 156 RGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
+ + + V L Q K + D+ + V DR +++ IF +A +R+ +LQ+ +A+
Sbjct: 186 KAIQKHVELLVFDLELTPSQAKKISDIADIKVIDRTQLILDIFARNATSRDGKLQVELAQ 245
Query: 216 LPYLWTRYRTIEDATNMN----------ITKGFLDSKRMVLMEREQKLKKALNKLKGQRE 265
L YL R ++D NM+ + L+ + + ER +L+ L LK +RE
Sbjct: 246 LKYLKGRLTELDD--NMSRLTGGIGGRGPGETKLEIGKRRVEERISRLEAELKSLKKRRE 303
Query: 266 MMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL 325
+ R ++++ + P V +VGYTN GK+TL+ ALT+ + L N+LFATLD TT P
Sbjct: 304 VNRRQRKKNELPVVGIVGYTNAGKSTLLNALTNSEVL-SENKLFATLDPTTRRIRFPEER 362
Query: 326 RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL 385
I+ DT+GFI ++P L FK TLE+ +D+++HVVDVSNPDY Q + V++ L+ L
Sbjct: 363 EIIISDTVGFIHDLPPELSNAFKATLEELGDSDLLVHVVDVSNPDYKLQMEAVEKILEEL 422
Query: 386 ELEEKILEHV--LVVGNKVD 403
E L H+ + V NK+D
Sbjct: 423 E-----LSHIPMIQVFNKID 437
>gi|399526404|ref|ZP_10766183.1| GTP-binding protein HflX [Actinomyces sp. ICM39]
gi|398363022|gb|EJN46672.1| GTP-binding protein HflX [Actinomyces sp. ICM39]
Length = 510
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 175/347 (50%), Gaps = 30/347 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G RV+D I + D ++ G G L VR V A V VD L
Sbjct: 105 AALAETAGSRVLDGIIQRRMKPDPATYLGSGKARELADIVRS---VEADTVIVDEELAPS 161
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 162 QRRGLEDVVDAKVVDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQA 221
Query: 235 -----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
TK LD +R + R KL+ + +++ R RN ++R P
Sbjct: 222 GGRVAGGAGIGSRGPGETKIELDRRR--IRTRMAKLRADIARMEPARRTQRNSRRRGAVP 279
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+VA+ GYTN GK+TL+ LTD LV ++ LFATLD T + DT+GF+
Sbjct: 280 SVAIAGYTNAGKSTLLNRLTDAGVLV-QDALFATLDPTVRRARAADGREYTLTDTVGFVR 338
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
N+PT L+E F+ TLE+ ADII+HVVD ++PD + Q Q V + +E +I E L+
Sbjct: 339 NLPTQLVEAFRSTLEEVGQADIILHVVDAAHPDPVSQVQAVRAVIDTIEGASEIPE--LI 396
Query: 398 VGNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
NK D P + R + +SA G G+ L+ ++DM+ +
Sbjct: 397 ALNKADLASPEQIALLRTVFPNAVPLSAHTGWGVEALRAALEDMLPR 443
>gi|386774394|ref|ZP_10096772.1| GTP-binding proten HflX [Brachybacterium paraconglomeratum LC44]
Length = 519
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 190/400 (47%), Gaps = 49/400 (12%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D + D +F GKG L V A A V D L
Sbjct: 127 AALAETAGSEVLDGILQRRAHPDPATFLGKGKAAELADIV---AESGADTVIADGELAPG 183
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 184 QRRALEDIVKVKVIDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQA 243
Query: 235 ------------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
TK LD +R + +R KL++ + + RE R ++R +
Sbjct: 244 GGQVGGAGAGMGSRGPGETKIELDRRR--IRDRMAKLRREIRLMAPGREAQRADRRRHQV 301
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P VA+ GYTN GK++L+ LT LV N LFATLD T P+ + DT+GF+
Sbjct: 302 PAVAIAGYTNAGKSSLLNRLTGAGVLV-ENALFATLDPTVRRATTPDGREFTFADTVGFV 360
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLE---LEEKILE 393
++PT L+E F+ TLE+ +D+++HVVD S+PD Q V L +E + E
Sbjct: 361 RHLPTQLVEAFRSTLEEVGDSDLLLHVVDASHPDPEGQVTAVRTVLGEIEGFDVPE---- 416
Query: 394 HVLVVGNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILKAT------- 442
+VV NK D P R E ++SA G G+ +L+E + + + +
Sbjct: 417 --IVVLNKADLAAPETIARLRSQVEVSAVVSARTGEGIEELRELIAERLPRPAVEVDVVV 474
Query: 443 --GRKNITMRVRSGGS--EYQWLMKHTAVSNIREDDTSAE 478
R ++ R + G + LM+ T V + ++ +AE
Sbjct: 475 PYSRGDLVSRAHTTGEVLAEEHLMEGTRVHALVDETLAAE 514
>gi|317483526|ref|ZP_07942510.1| GTP-binding protein HflX [Bifidobacterium sp. 12_1_47BFAA]
gi|322689523|ref|YP_004209257.1| GTP-binding protein [Bifidobacterium longum subsp. infantis 157F]
gi|322691480|ref|YP_004221050.1| GTP-binding protein [Bifidobacterium longum subsp. longum JCM 1217]
gi|384201224|ref|YP_005586971.1| GTP-binding protein [Bifidobacterium longum subsp. longum KACC
91563]
gi|419848812|ref|ZP_14371899.1| GTP-binding protein HflX [Bifidobacterium longum subsp. longum
1-6B]
gi|419851255|ref|ZP_14374205.1| GTP-binding protein HflX [Bifidobacterium longum subsp. longum 35B]
gi|419852043|ref|ZP_14374945.1| GTP-binding protein HflX [Bifidobacterium longum subsp. longum
2-2B]
gi|316915016|gb|EFV36454.1| GTP-binding protein HflX [Bifidobacterium sp. 12_1_47BFAA]
gi|320456336|dbj|BAJ66958.1| GTP-binding protein [Bifidobacterium longum subsp. longum JCM 1217]
gi|320460859|dbj|BAJ71479.1| GTP-binding protein [Bifidobacterium longum subsp. infantis 157F]
gi|338754231|gb|AEI97220.1| GTP-binding protein [Bifidobacterium longum subsp. longum KACC
91563]
gi|386406706|gb|EIJ21705.1| GTP-binding protein HflX [Bifidobacterium longum subsp. longum 35B]
gi|386406725|gb|EIJ21722.1| GTP-binding protein HflX [Bifidobacterium longum subsp. longum
1-6B]
gi|386412004|gb|EIJ26702.1| GTP-binding protein HflX [Bifidobacterium longum subsp. longum
2-2B]
Length = 501
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 174/363 (47%), Gaps = 28/363 (7%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR 156
W + + L E AL + G V D + D ++ G G + + V
Sbjct: 88 WSSAVTTQAKAEESLRELAALAET-AGAVVCDGLLQHRSKPDAATYVGSGKAKEIAGIV- 145
Query: 157 GDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
AR A + VD L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+
Sbjct: 146 --AREEADTIIVDDDLPPSQRRALEDAAKVKVVDRTAVILDIFAQHATSREGKAQVELAQ 203
Query: 216 LPYLWTRYR------------TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNK 259
L Y+ R R A ++G ++K R V+ R +L++ + +
Sbjct: 204 LEYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRTRIARLRRQIRE 263
Query: 260 LKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEG 319
+ RE+ R ++R PTVAVVGYTN GK++L LT LV N LFATLD
Sbjct: 264 MAPAREVKRGSRRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRA 322
Query: 320 MLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVD 379
+ YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q V+
Sbjct: 323 KTRDGRAYAYVDTVGFVRRLPTQLVEAFKSTLEEVAEADVILHVVDGSHPDPFSQVDAVN 382
Query: 380 ETLQHLELEEKILEHVLVVGNKVDAVPPGER----VTEEYDLLISATRGTGLAQLKEKVQ 435
+ L +E I ++V NK D R + ++SA G GL +L+ V+
Sbjct: 383 DVLADIEGTASIPR--ILVFNKADQADEATRERLAALQPDAFIVSAYTGEGLDELRTAVE 440
Query: 436 DMI 438
++
Sbjct: 441 SLL 443
>gi|404214729|ref|YP_006668924.1| GTPase [Gordonia sp. KTR9]
gi|403645528|gb|AFR48768.1| GTPase [Gordonia sp. KTR9]
Length = 482
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 181/351 (51%), Gaps = 30/351 (8%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G +++D+ I D ++ G G E L+ V T V L Q L+ +
Sbjct: 92 GSQILDAVIQRRSKPDPATYIGSGKAEELREIVLATGADT--VVCDGELTPAQLNALEKV 149
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNI 234
+V V DR +++ IF HA +RE + Q+++A++ Y+ R R ++ N
Sbjct: 150 VKVKVIDRTALILDIFAQHATSREGKAQVSLAQMEYMLPRLRGWGESMSRQAGGRAGSNG 209
Query: 235 TKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
G +++ R + ER KL++ + +K R R ++ PT+ V GYTN
Sbjct: 210 GVGLRGPGETKIETDRRRIRERMAKLRREIRGMKKARTTKRAARKSGSIPTITVAGYTNA 269
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GK++L+ A+T LV ++ LFATLD TT L + +++ DT+GF+ ++PT L+E F
Sbjct: 270 GKSSLVNAMTGAGVLV-QDALFATLDPTTRRATLDDGRAVVFTDTVGFVRHLPTQLVEAF 328
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV-LVVGNKVDAVP 406
+ TLE+ + AD+++HVVD ++ + Q V + + + EE + L+V NK+DA+
Sbjct: 329 RSTLEEVVDADLLLHVVDGADAFPMAQISAVRQVINDIVAEEGVTAPPELLVINKIDAI- 387
Query: 407 PGERVTEEYDLL------ISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
G R+TE L ISA G GL +L +V++ + GR+++ M +
Sbjct: 388 DGNRLTELRGALGSDAVFISARTGEGLPELFGRVREFV----GREDVEMTI 434
>gi|297566661|ref|YP_003685633.1| GTP-binding proten HflX [Meiothermus silvanus DSM 9946]
gi|296851110|gb|ADH64125.1| GTP-binding proten HflX [Meiothermus silvanus DSM 9946]
Length = 555
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 167/327 (51%), Gaps = 32/327 (9%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
+ D + G+G LE L+ + + T +F +D L Q + ++ + + V DR +++
Sbjct: 231 TLDPRYAVGRGKLEELQSRAYHENAGTLIF-GID-LTPAQAREIEAVTGLKVLDRTQLIL 288
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLM 247
IF HA++ EA+ Q+ +A+L YL R R + L+ R L
Sbjct: 289 DIFAQHARSPEAKAQVELAQLKYLLPRLVGKGKELSRLGGGIGTRGPGETKLEVDRRRLQ 348
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
ER L L ++ G+R+ R ++R P VAVVGYTN GKTTL++AL + N+
Sbjct: 349 ERITLLSDKLREIAGRRQETRRARERSGLPVVAVVGYTNAGKTTLMQALAKNGD-AGENK 407
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATL T G +P +LY DT+GFI ++P L+E F+ TLE+ AD+++HV+D S
Sbjct: 408 LFATLRPLTRRGFVPGVGEVLYTDTVGFIRHMPEELVEAFRSTLEELREADLLLHVLDAS 467
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDL---------- 417
+ L++ V+E L LE+E + VLV+ K D YDL
Sbjct: 468 SEGALERHAVVEELLGRLEVE---VPRVLVLA-KADR-------AGGYDLEFIQERLGGI 516
Query: 418 LISATRGTGLAQLKEKVQDMILKATGR 444
+SA G GL QLKE++ +L + R
Sbjct: 517 SVSALSGAGLPQLKEQIAARLLSSGVR 543
>gi|419853929|ref|ZP_14376724.1| GTP-binding protein HflX [Bifidobacterium longum subsp. longum 44B]
gi|386418265|gb|EIJ32729.1| GTP-binding protein HflX [Bifidobacterium longum subsp. longum 44B]
Length = 501
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 174/363 (47%), Gaps = 28/363 (7%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR 156
W + + L E AL + G V D + D ++ G G + + V
Sbjct: 88 WSSAVTTQAKAEESLRELAALAETA-GAVVCDGLLQHRSKPDAATYVGSGKAKEIAGIV- 145
Query: 157 GDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
AR A + VD L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+
Sbjct: 146 --AREEADTIIVDDDLPPSQRRALEDAAKVKVVDRTAVILDIFAQHATSREGKAQVELAQ 203
Query: 216 LPYLWTRYR------------TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNK 259
L Y+ R R A ++G ++K R V+ R +L++ + +
Sbjct: 204 LEYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRTRIARLRRQIRE 263
Query: 260 LKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEG 319
+ RE+ R ++R PTVAVVGYTN GK++L LT LV N LFATLD
Sbjct: 264 MAPAREVKRGSRRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRA 322
Query: 320 MLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVD 379
+ YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q V+
Sbjct: 323 KTRDGRAYAYVDTVGFVRRLPTQLVEAFKSTLEEVAEADVILHVVDGSHPDPFSQVDAVN 382
Query: 380 ETLQHLELEEKILEHVLVVGNKVDAVPPGER----VTEEYDLLISATRGTGLAQLKEKVQ 435
+ L +E I ++V NK D R + ++SA G GL +L+ V+
Sbjct: 383 DVLADIEGTASIPR--ILVFNKADQADEATRERLAALQPDAFIVSAYTGEGLDELRTAVE 440
Query: 436 DMI 438
++
Sbjct: 441 SLL 443
>gi|254475433|ref|ZP_05088819.1| GTP-binding proten HflX [Ruegeria sp. R11]
gi|214029676|gb|EEB70511.1| GTP-binding proten HflX [Ruegeria sp. R11]
Length = 423
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 213/429 (49%), Gaps = 32/429 (7%)
Query: 84 TDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFF 143
T + +VV P IK + + + L E AL ++ V+ S ++ L F
Sbjct: 6 TPTRAWVVHPDIKSDRDRRDAVS---ALEEGVALAKALPDIEVIGSDVVRLPKAHAGMLF 62
Query: 144 GKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAK 203
G G +E L+ Q + + V V + V + QQ+ L+ ++V + DR ++++IF A+
Sbjct: 63 GSGKIEELRDQFKAN-EVELVLIDGPVSPV-QQRNLEKAWKVKILDRTGLILEIFSDRAR 120
Query: 204 TREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQK 252
TRE LQ+ +A L Y R R + T++ +G +++ R + E+ +
Sbjct: 121 TREGVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDEQLVR 178
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
L++ L+K+ R + R + + +P VA+VGYTN GK+TL LT + ++ ++ LFATL
Sbjct: 179 LRRQLDKVVKTRTLHRAARAKVPYPIVALVGYTNAGKSTLFNRLTGAE-VMAKDMLFATL 237
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D T LP+ I+ DT+GFIS++PT L+ F+ TLE+ + AD+++HV D+S+ +
Sbjct: 238 DPTMRRVELPDGPEIILSDTVGFISDLPTELVAAFRATLEEVLAADVVVHVRDISHEESQ 297
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE------RVTEEYDL-LISATRGT 425
Q V+ L L +++ + V NK+D + E R E + ISA G
Sbjct: 298 NQADDVEAILTSLGVDDS--RARIEVWNKLDLLSEDEAEARRQRAEREDGIHAISAISGE 355
Query: 426 GLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVV 485
GL +L + + + +IT+ + G + WL + V + +T E L V+
Sbjct: 356 GLPRLLADIAEKLRSVRHEDDITLTF-AQGKQRAWLFEQDVVQKEVQTETGFE---LTVL 411
Query: 486 MTDVIMNKF 494
T+ +F
Sbjct: 412 WTETQKKRF 420
>gi|433775414|ref|YP_007305881.1| GTP-binding protein HflX [Mesorhizobium australicum WSM2073]
gi|433667429|gb|AGB46505.1| GTP-binding protein HflX [Mesorhizobium australicum WSM2073]
Length = 463
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 186/374 (49%), Gaps = 29/374 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVR-GDARVTAVFVSVD-VLKLHQQKMLQDLF 183
++ + ++++ + G G +E VR G A V V VD L QQ+ L+ F
Sbjct: 73 LIHTAVVTVNDPRPATLLGSGKVEEFAGIVREGHAEV----VIVDHPLTPVQQRNLEKQF 128
Query: 184 QVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT---RYRTIEDATNMN 233
V DR ++++IF A+T+E LQ+ +A L Y WT R R
Sbjct: 129 NAKVLDRTGLILEIFGERARTKEGTLQVELAHLNYQKGRLVRSWTHLERQRGGA-GFLGG 187
Query: 234 ITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLI 293
+ ++S R L E+ KLK L ++ R++ R K+++ FP VA+VGYTN GK+TL
Sbjct: 188 PGETQIESDRRQLQEKIIKLKHELETVRRTRDLHRAKRKKVPFPVVAIVGYTNAGKSTLF 247
Query: 294 KALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLED 353
LT L ++ LFATLD T LP+ I+ DT+GFIS++PT L+ F+ TLE+
Sbjct: 248 NKLTGAGVLA-QDMLFATLDPTLRRVRLPHGTPIILSDTVGFISDLPTHLIAAFRATLEE 306
Query: 354 AMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER--- 410
+ AD++IH+ D+S+PD Q + V+ L L ++ V+ V NK+D + G R
Sbjct: 307 VVEADLVIHLRDISDPDTAAQAEDVERILADLGVDASDTRRVIEVWNKIDLLDEGNRQRL 366
Query: 411 ------VTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKH 464
++E + +SA G G+ LK ++ + +T+ G WL ++
Sbjct: 367 LADSTDGSKEPPIAVSAVSGEGIDALKAVIETRMAGELQDLTVTIEPAQFGL-VDWLYRN 425
Query: 465 T-AVSNIREDDTSA 477
VS DD SA
Sbjct: 426 GDVVSRTDNDDGSA 439
>gi|365888714|ref|ZP_09427459.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. STM 3809]
gi|365335599|emb|CCD99990.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. STM 3809]
Length = 459
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 204/413 (49%), Gaps = 37/413 (8%)
Query: 84 TDHQVFVVQPFIKW-----GKKMKRNTTRDF--MLAESKALVSSIQGWRVVDSTIISLLS 136
T +V VV P+++ G + RD + E+ L +I V +S + +
Sbjct: 20 TTGRVIVVGPYLRTRRGDDGAPASHSEMRDVEARIDEAAGLARAIN-LTVAESILALIGQ 78
Query: 137 FDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVI 195
++ GKG ++ + + A A V +D L QQ+ L+ + V DR +++
Sbjct: 79 IRPATYLGKGKVDEIAGVI---ASQGAELVVMDCALSPIQQRNLEKAWNTKVLDRTGLIL 135
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRM 244
+IF AKT+E LQ+ +A L Y R R + T++ +G +++ R
Sbjct: 136 EIFGRRAKTKEGALQVELAHLNY--QRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRR 193
Query: 245 VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVP 304
++ +R +L+ L K++ R + R +QR + VA+VGYTN GK+TL LT D +
Sbjct: 194 LIGDRITRLENELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRAD-VQA 252
Query: 305 RNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
+ LFATLD T LP+ + + DT+GFISN+PT L+ F+ TLE+ + AD+I+HV
Sbjct: 253 ADMLFATLDPTLRAISLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEADVILHVR 312
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD----------AVPPGERVTEE 414
D+S+ D Q+ V+ L L ++ + + ++ V NK+D A R E
Sbjct: 313 DMSHEDAEAQQHDVELVLSQLGIDPEATDTIIEVWNKIDRLDDAARENLANIAARRPPER 372
Query: 415 YDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
++SA G G+ L + ++D + A ++T+ + G+ WL ++ V
Sbjct: 373 PCFMVSAETGEGVEALLQAIEDRLAAARTTLDLTIDA-ADGAGISWLHRNAEV 424
>gi|359792292|ref|ZP_09295112.1| GTP-binding proten HflX [Mesorhizobium alhagi CCNWXJ12-2]
gi|359251650|gb|EHK54988.1| GTP-binding proten HflX [Mesorhizobium alhagi CCNWXJ12-2]
Length = 463
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 193/389 (49%), Gaps = 32/389 (8%)
Query: 76 EAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFM-------LAESKALVSSIQGWRVVD 128
EA G G + V+ P + + +T R + L E+ L +I +V
Sbjct: 18 EANAGR-GELTRAVVIVPLLSRSPRTDEDTGRPRLNRSPEARLDEAVGLAQAID-LDIVH 75
Query: 129 STIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVF 188
I++L + FG G +E + QV D + V + + QQ+ L+ + V
Sbjct: 76 KAIVTLNDPRPSTLFGSGKVEEIA-QVIKDGHAELLIVDHPLTPV-QQRNLEKATEAKVL 133
Query: 189 DRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT---RYRTIEDATNMNITKGF 238
DR ++++IF A+T+E LQ+ +A L Y WT R R +
Sbjct: 134 DRTGLILEIFGERARTKEGTLQVDLAHLNYQKGRLVRSWTHLERQRGGA-GFLGGPGETQ 192
Query: 239 LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTD 298
++S R L E+ KLK+ L ++ R++ R K+++ FP VA+VGYTN GK+TL LT
Sbjct: 193 IESDRRALQEKITKLKRELETVRRTRDLHRAKRKKVPFPVVAIVGYTNAGKSTLFNRLTG 252
Query: 299 DDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLAD 358
L + LFATLD T LP+ ++ DT+GFIS++PT L+ F+ TLE+ + AD
Sbjct: 253 AGVLA-EDMLFATLDPTLRRVRLPHGTPVILSDTVGFISDLPTHLIAAFRATLEEVVEAD 311
Query: 359 IIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG--ERVTEE-- 414
+IIH+ D+S+PD Q + V+ L L ++ + ++ V NK+D + G ER+ E
Sbjct: 312 LIIHLRDISDPDTAAQAEDVERILVDLGVDASDEKRIIEVWNKIDRLDEGNRERLLAEGA 371
Query: 415 -----YDLLISATRGTGLAQLKEKVQDMI 438
+ ISA G G+ +L +++ +
Sbjct: 372 GGKASPPVAISAITGEGIDKLAAIIEERL 400
>gi|39935664|ref|NP_947940.1| GTP-binding protein HSR1-related [Rhodopseudomonas palustris
CGA009]
gi|39649517|emb|CAE28039.1| GTP binding protein-like [Rhodopseudomonas palustris CGA009]
Length = 424
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 195/386 (50%), Gaps = 39/386 (10%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D L E+ L +I VV++ + + ++ GKG +E + + A A +
Sbjct: 17 DARLDEAAGLARAID-LDVVEAVLTPISQIRPATYLGKGKVEEIVGLI---AAHGADLIV 72
Query: 168 VDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI 226
+D L QQ+ L+ + V DR ++++IF AKTRE LQ+ +A L Y R R +
Sbjct: 73 MDCALSPIQQRNLEKAWNAKVLDRTGLILEIFGRRAKTREGTLQVELAHLNY--QRSRLV 130
Query: 227 EDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQK 275
T++ +G +++ R ++ ER KL+ L K++ R + R +QR
Sbjct: 131 RSWTHLERQRGGFGFMGGPGETQIEADRRLIGERITKLEAELKKVQATRRLHRAGRQRVP 190
Query: 276 FPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGF 335
+ VA+VGYTN GK+TL LT D + + LFATLD T LP+ + + DT+GF
Sbjct: 191 YRVVALVGYTNAGKSTLFNRLTRAD-VQAADMLFATLDPTLRAIQLPHGGKAMLSDTVGF 249
Query: 336 ISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEE---KIL 392
ISN+PT L+ F+ TLE+ + AD+I+HV D+S+ D Q+ VD L+ L ++ +I+
Sbjct: 250 ISNLPTQLVAAFRATLEEVLEADLILHVRDISHEDAEAQQHDVDNVLRQLGVDAASGRIV 309
Query: 393 EHVLVVGNKVDAVPP----------GERVTEEYDLLISATRGTGLAQLKEKVQDMILKAT 442
E V NK+D P R + LL+SA G G+ +L ++ + A
Sbjct: 310 E----VWNKIDRFEPEQRDELKNIAARRPEDHPCLLVSAVSGEGVDELLLSIEQRL--AA 363
Query: 443 GRKNITMRVRSG-GSEYQWLMKHTAV 467
R + + + + G+ WL ++T V
Sbjct: 364 TRTVLDLSIDAADGAGVSWLHRNTEV 389
>gi|451944408|ref|YP_007465044.1| GTP-binding protein [Corynebacterium halotolerans YIM 70093 = DSM
44683]
gi|451903795|gb|AGF72682.1| GTP-binding protein [Corynebacterium halotolerans YIM 70093 = DSM
44683]
Length = 517
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 173/323 (53%), Gaps = 31/323 (9%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G ++ L+ + T V L Q L++ V DR M+++ I
Sbjct: 133 DPGTYIGSGKVDQLRDIIAATGADTVVCDGE--LAPGQLVALENALNTKVIDRTMLILDI 190
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------------LD 240
F HAK++E + Q+++A++ YL TR R N++ G ++
Sbjct: 191 FAQHAKSKEGKAQVSLAQMEYLITRVRGW--GGNLSRQAGGRAGSNGGVGLRGPGETKIE 248
Query: 241 SKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDD 300
+ R L KL++ L +K RE+ R+++Q P +A+ GYTN GK++LI A+T
Sbjct: 249 ADRRRLRADMAKLRRELAGMKTSREIKRHRRQSSTTPQIAIAGYTNAGKSSLINAMTGAG 308
Query: 301 SLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADII 360
LV + LFATLD TT L + +++ DT+GF+ ++PT L+E FK TLE+ + AD++
Sbjct: 309 VLV-EDALFATLDPTTRRATLADGRAVVFTDTVGFVRHLPTQLVEAFKSTLEEVLAADLM 367
Query: 361 IHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVVGNKVDAVPP-----GERVTE 413
+HVVD S+P L+Q + V++ + + E E+ ++VV NK+DA P V +
Sbjct: 368 LHVVDGSDPFPLRQIEAVNKVVYDIVRETGEEAPPEIIVV-NKIDAADPLVLAELRHVLD 426
Query: 414 EYDLL-ISATRGTGLAQLKEKVQ 435
D++ +SA G G+ +L+ +++
Sbjct: 427 RDDVVFVSAKTGEGVPELEARIE 449
>gi|441508303|ref|ZP_20990227.1| GTP-binding protein HflX [Gordonia aichiensis NBRC 108223]
gi|441447331|dbj|GAC48188.1| GTP-binding protein HflX [Gordonia aichiensis NBRC 108223]
Length = 530
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 187/371 (50%), Gaps = 40/371 (10%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E A ++ G V+++ I S D ++ G G + L R V D V + L
Sbjct: 120 EELAALAETAGSAVLEAVIQRRSSPDPATYIGSGKAQEL-RDVVADTGADTVICDGE-LT 177
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA--- 229
Q L+ + +V V DR +++ IF HA +RE + Q+A+A++ Y+ R R ++
Sbjct: 178 PAQLTALEKVVKVKVIDRTALILDIFAQHASSREGKAQVALAQMEYMLPRLRGWGESMSR 237
Query: 230 -----TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
N G +++ R + ER KL++ + +++ R R+ + R P
Sbjct: 238 QAGGRAGSNGGVGLRGPGETKIETDRRRIRERMAKLRREIREMRTARTTKRSARLRGAVP 297
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+AV GYTN GK++L+ A+T LV ++ LFATLD TT L + +++ DT+GF+
Sbjct: 298 RIAVAGYTNAGKSSLVNAMTGSGVLV-QDALFATLDPTTRRATLEDGRELVFTDTVGFVR 356
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV-L 396
++PT L+E F+ TLE+ + AD+++HVVD S+P +Q V + + +E + L
Sbjct: 357 HLPTQLVEAFRSTLEEVVDADLVLHVVDGSDPFPAEQITAVRRVINDVVADEGVAPPPEL 416
Query: 397 VVGNKVDAVPPGERVTEEYDLL----------------ISATRGTGLAQLKEKVQDMILK 440
+V NK+DA+ R+TE +L +SA G GL +L E V++ +
Sbjct: 417 LVINKIDAI-DASRLTELRAMLGAGGSTHGPNSAGVVYVSARTGEGLPELFETVREFV-- 473
Query: 441 ATGRKNITMRV 451
GR ++ + V
Sbjct: 474 --GRDDVELVV 482
>gi|421099247|ref|ZP_15559904.1| GTP-binding protein HflX [Leptospira borgpetersenii str. 200901122]
gi|410797679|gb|EKR99781.1| GTP-binding protein HflX [Leptospira borgpetersenii str. 200901122]
Length = 509
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 159/290 (54%), Gaps = 22/290 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VVD+ I D + GKG LE + ++ + + V L Q K + D+ +
Sbjct: 145 VVDTFIQRKNRLDPSTVLGKGKLEEI--ILKAIQKHVELLVFDLELTPSQAKKISDIADI 202
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN----------IT 235
V DR +++ IF +AK+R+ +LQ+ +A+L YL R ++D NM+
Sbjct: 203 KVIDRTQLILDIFARNAKSRDGKLQVELAQLKYLKGRLTELDD--NMSRLTGGIGGRGPG 260
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ + + ER +L+ L LK +RE+ R ++++ + P V +VGYTN GK+T + A
Sbjct: 261 ETKLEIGKRRVEERITRLEVELKSLKKRREINRRQRKKNELPAVGIVGYTNAGKSTFLNA 320
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT+ + L N+LFATLD TT P I+ DT+GFI ++P L FK TLE+
Sbjct: 321 LTNSEVL-SENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPELSNAFKATLEELG 379
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV--VGNKVD 403
+D+++HVVDVSNPDY Q + V++ L+ LE H+ + V NK+D
Sbjct: 380 DSDLLVHVVDVSNPDYKLQMEAVEKILEELE-----FSHIPIIQVFNKID 424
>gi|347528178|ref|YP_004834925.1| putative GTP-binding protein HflX [Sphingobium sp. SYK-6]
gi|345136859|dbj|BAK66468.1| putative GTP-binding protein HflX [Sphingobium sp. SYK-6]
Length = 439
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 206/439 (46%), Gaps = 52/439 (11%)
Query: 98 GKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRG 157
G + +R+ + L E++ L +I G VV++ + + + FG G +E + V
Sbjct: 6 GGRQRRDVS--ARLEEARGLALAI-GLDVVETGVWRVRQSRPAALFGSGQVEEIGALV-- 60
Query: 158 DARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAEL 216
A+ A V VD L QQ L+ + V DR ++++IF A T E RLQ+ +A L
Sbjct: 61 -AQAEAELVVVDNNLTPVQQSNLEKAWSAKVIDRTGLILEIFGERAATAEGRLQVELAHL 119
Query: 217 PY-------LWT---RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREM 266
Y WT R R +RM+ +R ++++ L+++ R +
Sbjct: 120 DYQAGRLVRSWTHLERQRGGFGFLGGPGETQIEADRRMI-RDRMARIRRELDQVTRTRGL 178
Query: 267 MRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLR 326
R ++QR +P +A+VGYTN GK+TL LT D ++ ++ LFATLD T + LP +
Sbjct: 179 HRARRQRAPWPVIALVGYTNAGKSTLFNRLTGAD-VMAQDMLFATLDPTMRQISLPGIDK 237
Query: 327 ILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL- 385
+ DT+GF+S++P L+ F+ TLE+ + AD+I+HV D+++PD QK V + L L
Sbjct: 238 AILSDTVGFVSDLPHQLIAAFRATLEEVLSADLILHVRDIAHPDTEAQKADVLDVLADLG 297
Query: 386 -----------ELEEKILEH--------VLVVGNKVDAVPPGERVT--------EEYDLL 418
+ E H ++ + NK D + ER+ E +
Sbjct: 298 AAPADEDGSAGKAEAPDAAHEGGGPVAPIIEIWNKADLIEDPERLAAVRARAEQEGNVAI 357
Query: 419 ISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAE 478
+SA G G+ L+ + D++ K R IT+ G+ WL H V + E DTS E
Sbjct: 358 VSALTGEGVDALRRMLSDILAKGHRRYEITLD-GGDGAALAWLHAHGDVL-LEEHDTSGE 415
Query: 479 HLLLDVVMTDVIMNKFKHE 497
V V M HE
Sbjct: 416 ---TATVHVSVRMAPADHE 431
>gi|23465868|ref|NP_696471.1| GTP-binding protein [Bifidobacterium longum NCC2705]
gi|23326569|gb|AAN25107.1| GTP-binding protein [Bifidobacterium longum NCC2705]
Length = 501
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 174/363 (47%), Gaps = 28/363 (7%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR 156
W + + L E AL + G V D + D ++ G G + + V
Sbjct: 88 WSSAVTTQAKAEESLRELAALAETA-GAVVCDGLLQHRSKPDAATYVGSGKAKEIAGIV- 145
Query: 157 GDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
AR A + VD L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+
Sbjct: 146 --AREEADTIIVDDDLPPSQRRALEDAAKVKVVDRTAVILDIFAQHATSREGKAQVELAQ 203
Query: 216 LPYLWTRYR------------TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNK 259
L Y+ R R A ++G ++K R V+ R +L++ + +
Sbjct: 204 LEYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRTRIARLRRQIRE 263
Query: 260 LKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEG 319
+ RE+ R ++R PTVAVVGYTN GK++L LT LV N LFATLD
Sbjct: 264 MAPAREVKRGSRRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRA 322
Query: 320 MLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVD 379
+ YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q V+
Sbjct: 323 KTRDGRAYAYVDTVGFVRRLPTQLVEAFKSTLEEVAEADVILHVVDGSHPDPFSQVDAVN 382
Query: 380 ETLQHLELEEKILEHVLVVGNKVDAVPPGER----VTEEYDLLISATRGTGLAQLKEKVQ 435
+ L +E I ++V NK D R + ++SA G GL +L+ V+
Sbjct: 383 DVLADIEGTASIPR--ILVFNKADQADEATRERLAALQPDAFIVSAYTGEGLDELRTAVE 440
Query: 436 DMI 438
++
Sbjct: 441 SLL 443
>gi|418056278|ref|ZP_12694331.1| GTP-binding proten HflX [Hyphomicrobium denitrificans 1NES1]
gi|353209497|gb|EHB74900.1| GTP-binding proten HflX [Hyphomicrobium denitrificans 1NES1]
Length = 467
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 186/348 (53%), Gaps = 24/348 (6%)
Query: 106 TRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVF 165
T + L+E+ L ++I+ ++DS I+ + + G G ++ L ++VR D + V
Sbjct: 57 TPENRLSEAVGLANAIE-LDIIDSAIVPMSEPRPSTLLGSGKVDELGQRVR-DLDIGLVV 114
Query: 166 VSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY------- 218
V L QQ+ L+ + V DR ++++IF A A+TRE LQ+ +A L Y
Sbjct: 115 VD-HALTPVQQRNLEKAWNTKVVDRTGLILEIFGARARTREGVLQVELAHLSYQKGRLVR 173
Query: 219 LWT---RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQK 275
WT R R + ++ R +L +R +K+ L + R++ R +++
Sbjct: 174 AWTHLERQRGGG-GFLGGPGEAQIELDRRMLQDRIDAIKRDLADVVRTRDLHRKGRRKVP 232
Query: 276 FPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGF 335
+P VAVVGYTN GK+TL +T +V +Q+FATLD T E LP+ RI+ DT+GF
Sbjct: 233 YPIVAVVGYTNAGKSTLFNKITGA-GVVAMDQVFATLDPTMREVKLPSARRIILSDTVGF 291
Query: 336 ISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEE-KILEH 394
IS++PT L+ F+ TLE+ + AD+I+HV D+++ + Q + V++ L L ++ + H
Sbjct: 292 ISDLPTMLVAAFRATLEEVVEADLILHVRDIAHEETEAQARDVEKVLGELGIDTIQADGH 351
Query: 395 VLVVGNKVDAVPPGERVTEEYD--------LLISATRGTGLAQLKEKV 434
+L V NK+D V R +++ +L+SA G G+ L + +
Sbjct: 352 ILEVWNKIDLVSHDRRGELQHEALRNECPPVLVSAATGEGIVPLLDAI 399
>gi|357588832|ref|ZP_09127498.1| GTPase [Corynebacterium nuruki S6-4]
Length = 476
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 174/341 (51%), Gaps = 25/341 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G VVD D ++ G G +E L RQV + V V+ L Q
Sbjct: 79 AALAETAGSEVVDMLYQRRDKPDAGTYIGSGKVEEL-RQVVVETGADTV-VADGELSPGQ 136
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA------ 229
L+ V V DR M+++ IF HAK+RE + Q+ +A+L YL TR R A
Sbjct: 137 MIALEKALDVKVIDRTMLILDIFAQHAKSREGKAQVQLAQLEYLITRVRGWGGALSRQAG 196
Query: 230 --TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
N G +++ R + +L++ + +K RE R ++ VA
Sbjct: 197 GRAGSNGGVGLRGPGETKIEADRRRIRTDMARLRREIAGMKKARETKRRRRDASAVAQVA 256
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+ GYTN GK++L+ ALT LV + LFATLD TT L + +++ DT+GFI +P
Sbjct: 257 IAGYTNAGKSSLLNALTGAGVLV-EDALFATLDPTTRRASLKDGRTVVFSDTVGFIRFLP 315
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELE--EKILEHVLVV 398
T L+E F+ TLE+ M AD+++HVVD S+P ++Q V+ + + E E +LVV
Sbjct: 316 TQLVEAFRSTLEEVMAADVVLHVVDGSDPFPMEQIAAVNSVIGDIAAETGEDAPPEILVV 375
Query: 399 GNKVDAVPP---GERVTEEYDLL-ISATRGTGLAQLKEKVQ 435
NKVDA P E + D++ +SA G G+A+L+ +++
Sbjct: 376 -NKVDAADPLVLAELRSRLDDVVFVSAATGEGIAELESRLE 415
>gi|227503450|ref|ZP_03933499.1| HflX family GTP-binding protein [Corynebacterium accolens ATCC
49725]
gi|227075953|gb|EEI13916.1| HflX family GTP-binding protein [Corynebacterium accolens ATCC
49725]
Length = 502
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 171/323 (52%), Gaps = 31/323 (9%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D +F G G ++ L V +A V L Q L+ V DR M+++ I
Sbjct: 122 DPGTFIGSGKVKELHDIV--EATGADTVVCDGELNPGQLTALERALNTKVIDRTMLILDI 179
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------------LD 240
F HAK++E + Q+++A+L YL+T R N++ G ++
Sbjct: 180 FAQHAKSKEGKAQVSLAQLEYLYTHTRGW--GGNLSRQAGGRAGSNGGVGLRGPGETKIE 237
Query: 241 SKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDD 300
+ R + +L+K L +K RE+ R+++Q +A+ GYTN GK++LI A+T+
Sbjct: 238 TDRRRIRTEMARLRKELRGMKTAREVKRSRRQSSTIAQIAIAGYTNAGKSSLINAMTNAG 297
Query: 301 SLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADII 360
LV + LFATLD TT L + ++++ DT+GF+ ++PT L+E FK TLE+ + ADI+
Sbjct: 298 VLV-EDALFATLDPTTRRASLADGRQVVFTDTVGFVRHLPTQLVEAFKSTLEEVLAADIM 356
Query: 361 IHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVVGNKVDAVPP-----GERVTE 413
+HVVD S+P L+Q + V+E + + E E+ ++V+ NK+D P V +
Sbjct: 357 LHVVDGSDPFPLKQIEAVNEVIYDIVSETGEQAPPEIIVI-NKIDQADPLVLAELRHVLD 415
Query: 414 EYDLL-ISATRGTGLAQLKEKVQ 435
D++ +SA G G+ +L +V+
Sbjct: 416 HEDVVYVSARTGEGIDELSARVE 438
>gi|305681126|ref|ZP_07403933.1| GTP-binding protein HflX [Corynebacterium matruchotii ATCC 14266]
gi|305659331|gb|EFM48831.1| GTP-binding protein HflX [Corynebacterium matruchotii ATCC 14266]
Length = 559
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 204/427 (47%), Gaps = 32/427 (7%)
Query: 37 MKRNTTRDFMLAESKALVKFSDNSQDDLEESDEFKTIRDEAQTGALGTD------HQVFV 90
M +T +L S +V + DLEE F+ I + A D ++
Sbjct: 71 MSADTAATGVLTASMPMVGVPTTGELDLEERSSFRRISGSSDIYATDQDDGYDVEYRKLR 130
Query: 91 VQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLEL 150
++ I G + T A ++ G VVD D ++ G G ++
Sbjct: 131 LERVILVGVWTEGTTAEIEATMRELAALAQTAGSEVVDMLYQKRDRPDPGTYIGSGKVQE 190
Query: 151 LKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQ 210
LK V+ + V + L Q L+ V V DR M+++ IF HAK++E + Q
Sbjct: 191 LKDIVQA-TNIDTVICDGE-LSPGQMIALEKALDVKVIDRTMLILDIFAQHAKSKEGKAQ 248
Query: 211 IAIAELPYLWTRYRTIEDATNMNITKGF----------------LDSKRMVLMEREQKLK 254
+++A++ YL TR R A + +++ R L KL+
Sbjct: 249 VSLAQMEYLITRVRGWGGALSRQAGGRAGGSNGGVGLRGPGETKIEADRRRLRSDMAKLR 308
Query: 255 KALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDV 314
K + ++ RE+ R++++ P +A+ GYTN GK++LI A+T LV + LFATLD
Sbjct: 309 KEIAGMQTAREIKRSRRRASTIPQIAIAGYTNAGKSSLINAITGAGVLV-EDALFATLDP 367
Query: 315 TTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQ 374
TT L + +++ DT+GF+ ++PT L+E F+ TLE+ + AD+++HVVD S+P L+Q
Sbjct: 368 TTRRAELADGRTVVFTDTVGFVRHLPTQLVEAFRSTLEEVVGADLVLHVVDGSDPFPLKQ 427
Query: 375 KQHVDETLQHL--ELEEKILEHVLVVGNKVDAVPPGERVTEEYD----LLISATRGTGLA 428
V++ + + E E ++VV NK+DA P V + + +SA G G++
Sbjct: 428 IAAVNKVIGEIVQEYGETAPPEIIVV-NKIDAADPLVLVELRHAVDDVVFVSAHTGEGIS 486
Query: 429 QLKEKVQ 435
+L+ +++
Sbjct: 487 ELEARIE 493
>gi|146340795|ref|YP_001205843.1| GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 278]
gi|146193601|emb|CAL77618.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 278]
Length = 459
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 204/413 (49%), Gaps = 37/413 (8%)
Query: 84 TDHQVFVVQPFIKW-----GKKMKRNTTRDF--MLAESKALVSSIQGWRVVDSTIISLLS 136
T +V VV P+++ G + RD + E+ L +I V +S + +
Sbjct: 20 TTGRVIVVGPYLRTRRGDDGAPASHSEMRDVEARIDEAAGLARAIN-LTVAESILALIGQ 78
Query: 137 FDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVI 195
++ GKG ++ + + A A V +D L QQ+ L+ + V DR +++
Sbjct: 79 IRPATYLGKGKVDEIAGVI---ASQEAELVVMDCALSPIQQRNLEKAWNTKVLDRTGLIL 135
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRM 244
+IF AKT+E LQ+ +A L Y R R + T++ +G +++ R
Sbjct: 136 EIFGRRAKTKEGALQVELAHLNY--QRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRR 193
Query: 245 VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVP 304
++ +R +L+ L K++ R + R +QR + VA+VGYTN GK+TL LT D +
Sbjct: 194 LIGDRITRLENELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRAD-VQA 252
Query: 305 RNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
+ LFATLD T LP+ + + DT+GFISN+PT L+ F+ TLE+ + AD+I+HV
Sbjct: 253 ADMLFATLDPTLRAISLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEADVILHVR 312
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD----------AVPPGERVTEE 414
D+S+ D Q+ V+ L L ++ + + ++ V NK+D A R E
Sbjct: 313 DMSHEDAEAQQHDVELVLSQLGIDPEATDTIIEVWNKIDRLDDAARENLANIAARRPPER 372
Query: 415 YDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
++SA G G+ L + ++D + A ++T+ + G+ WL ++ V
Sbjct: 373 PCFMVSAETGEGVDALLQAIEDRLAAARTTLDLTIDA-ADGAGISWLHRNAEV 424
>gi|359407776|ref|ZP_09200250.1| GTP-binding protein HflX [SAR116 cluster alpha proteobacterium
HIMB100]
gi|356677139|gb|EHI49486.1| GTP-binding protein HflX [SAR116 cluster alpha proteobacterium
HIMB100]
Length = 435
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 197/411 (47%), Gaps = 24/411 (5%)
Query: 88 VFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGN 147
F+VQP +K + T L E+ L +IQ VV II+L ++ G G
Sbjct: 6 AFIVQPELKQASQSGSTRTPQTKLDEAAGLAEAIQ-LDVVHKEIITLSKPRSGTYLGPGV 64
Query: 148 LELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREA 207
++ L + +F+ L Q + L+ + V DR ++++IF A A T
Sbjct: 65 VDRLAG--LAEYHDHPLFIINTSLSPVQHRNLETALKCKVIDRTALILEIFGARASTHAG 122
Query: 208 RLQIAIAELPY-------LWT---RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKAL 257
RLQ+ +A L + WT R R + +RM L ++ +++KK L
Sbjct: 123 RLQVELAALSFQKSRLVRSWTHLERQRGGGGFLGGPGERQIELDRRM-LTDQVKQIKKEL 181
Query: 258 NKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTH 317
+ ++ R + R + R + PT+A+VGYTN GK+TL LT D L ++ LFATLD T
Sbjct: 182 SDVERTRGLQRRNRDRSETPTIALVGYTNAGKSTLFNRLTGADVL-SKDMLFATLDPTMR 240
Query: 318 EGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQH 377
LP+ +I+ DT+GFIS +PT L+E FK TLE+ + AD+I+HV D+S+ ++
Sbjct: 241 GMHLPSGRQIVLADTVGFISALPTELVEAFKSTLEEVVQADLILHVHDMSSELCAEEALD 300
Query: 378 VDETLQHLELEEKIL-EHVLVVGNKVDA------VPPGERVTEEYDLLISATRGTGLAQL 430
V L + +E+ + +L + NK DA +P L SA GTG+ +
Sbjct: 301 VATVLDDIGFDEQARDDRILHIFNKADAAVEDVELPFITTGASGRALTCSALTGTGVDDV 360
Query: 431 KEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLL 481
++ K+ T+ G + WL +H + N DD + +H++
Sbjct: 361 LAQIDRFFAKSDSLCEFTLNPDYGAAS-AWLHQHARIINSHYDD-AGQHIV 409
>gi|317125285|ref|YP_004099397.1| GTP-binding protein HflX [Intrasporangium calvum DSM 43043]
gi|315589373|gb|ADU48670.1| GTP-binding protein HflX [Intrasporangium calvum DSM 43043]
Length = 495
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 165/314 (52%), Gaps = 29/314 (9%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D S+ GKG L+ V + T ++ D L Q++ L+D+ +V V DR +++ I
Sbjct: 124 DPASYLGKGKAIELRDIVIAEGADT--VIADDELAPSQRRALEDVVKVKVIDRTALILDI 181
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI-----------------TKGFLD 240
F HAK+RE + Q+ +A+L YL R R ++ + TK LD
Sbjct: 182 FAQHAKSREGKAQVELAQLQYLLPRLRGWGESMSRQAGGQAAGGQGMGSRGPGETKIELD 241
Query: 241 SKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDD 300
+R + R KL++ + +K R+ R+ +++ P+VA+ GYTN GK++L+ LT
Sbjct: 242 RRR--INTRMAKLRREIADMKTHRDTKRSTRKKGGVPSVAIAGYTNAGKSSLLNRLTGAG 299
Query: 301 SLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADII 360
LV NQLFATLD T + DT+GF+ ++PT L+E F+ TLE+ AD++
Sbjct: 300 VLV-ENQLFATLDTTVRRSETKDGREFTLTDTVGFVRSLPTHLVEAFRSTLEEVGDADLL 358
Query: 361 IHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE----RVTEEYD 416
+HVVD S+PD Q V E L +E + ++ V+VV NK D P R E++
Sbjct: 359 LHVVDGSHPDPEGQITAVREVLADVEAAD--VKEVIVV-NKADIADPDVLDRIRRHEKHS 415
Query: 417 LLISATRGTGLAQL 430
+ +SA G G+ +L
Sbjct: 416 IAVSARTGAGIQEL 429
>gi|407973165|ref|ZP_11154077.1| GTP-binding proten HflX [Nitratireductor indicus C115]
gi|407431006|gb|EKF43678.1| GTP-binding proten HflX [Nitratireductor indicus C115]
Length = 436
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 180/347 (51%), Gaps = 24/347 (6%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
QQ+ L+ V DR ++++IF A+T+E RLQ+ +A L Y R R + T++
Sbjct: 95 QQRNLEKALNAKVLDRTGLILEIFGRRARTKEGRLQVDLAHLEY--QRGRLVRSWTHLER 152
Query: 235 TKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVG 283
+G +++ R +L ++ +LK+ L ++ R++ R+K+++ FP VA+VG
Sbjct: 153 QRGGGGFMGGPGETQIEADRRLLQDKIVRLKRELETVRRTRDLHRSKRRKVPFPIVAIVG 212
Query: 284 YTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTL 343
YTN GK+TL LT S++ + LFATLD T LP+ ++ DT+GFIS++PT L
Sbjct: 213 YTNAGKSTLFNRLTGA-SVMAEDMLFATLDPTLRRVQLPHGTTVILSDTVGFISDLPTHL 271
Query: 344 LEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+ F+ TLE+ + AD+IIH+ D+S+PD Q V L L ++ VL V NK+D
Sbjct: 272 VAAFRATLEEVVEADLIIHLRDISDPDSSAQANDVASILGDLGVDAADKTRVLEVWNKID 331
Query: 404 AVPPGER-----VTEEYD--LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGS 456
+ +R +T D + ISA G G+ L V+ I A +T+ R
Sbjct: 332 NLADEQRHAQLEITHGPDAPIAISAVTGEGIDTLLSTVEQRISGALAPLTLTLSPRQ-MQ 390
Query: 457 EYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSRK 503
W+ +H V +++D + + + V TD+ N+ + K
Sbjct: 391 FLDWVYRHGDVVERKDNDDGS--ITITVRATDMARNEILEKLTGDSK 435
>gi|399992676|ref|YP_006572916.1| GTP-binding protein HflX [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398657231|gb|AFO91197.1| GTP-binding protein HflX [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 423
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 211/429 (49%), Gaps = 32/429 (7%)
Query: 84 TDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFF 143
T + +VV P IK + + + LAE +L ++ V+ S ++ L F
Sbjct: 6 TPTRAWVVHPDIKSDRDRRDPVS---ALAEGVSLAEALPDIEVIGSAVVRLPKAHAGMLF 62
Query: 144 GKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAK 203
G G ++ LK Q D V V + V + QQ+ L+ ++V + DR ++++IF A+
Sbjct: 63 GSGKIDELKAQFH-DEEVELVLIDGPVSPV-QQRNLEKAWKVKILDRTGLILEIFSDRAR 120
Query: 204 TREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQK 252
TRE LQ+ +A L Y R R + T++ +G +++ R + E+ +
Sbjct: 121 TREGVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDEQLVR 178
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
L++ L+K+ R + R + + +P VA+VGYTN GK+TL LT + ++ ++ LFATL
Sbjct: 179 LRRQLDKVVKTRTLHRAARAKIPYPIVALVGYTNAGKSTLFNRLTGAE-VMAKDMLFATL 237
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D T LP+ I+ DT+GFIS++PT L+ F+ TLE+ + AD+++HV D+S+ +
Sbjct: 238 DPTMRRVQLPDGPEIILSDTVGFISDLPTELVAAFRATLEEVLAADVVVHVRDISHDETQ 297
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVD------AVPPGERVTEEYDL-LISATRGT 425
Q V+ L L +++ L V NK+D A +R E + ISA G
Sbjct: 298 NQAADVESILASLGVDDS--RARLEVWNKLDLLDDEQAEARRQRAEREDGIHAISAISGE 355
Query: 426 GLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVV 485
GL L + + IT+ + G + WL + V + + + E L V+
Sbjct: 356 GLEDLLADITSQLRLIRHEDEITLTF-AQGKQRAWLFEQDVVQSETQTEIGFE---LTVL 411
Query: 486 MTDVIMNKF 494
T+ N+F
Sbjct: 412 WTETQKNRF 420
>gi|118589883|ref|ZP_01547287.1| GTP binding protein-like [Stappia aggregata IAM 12614]
gi|118437380|gb|EAV44017.1| GTP binding protein-like [Stappia aggregata IAM 12614]
Length = 426
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 186/359 (51%), Gaps = 39/359 (10%)
Query: 101 MKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDAR 160
++ N + + L E+ L ++I + S ++ + S + FG G + A
Sbjct: 18 LRGNRSPEARLEEALGLSAAIN-LNIAHSGVVRVNSPKPATLFGDGKV----------AE 66
Query: 161 VTAVFVSVDV--------LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIA 212
+ + S D+ L QQ+ L+ + V DR ++++IF A+T+E RLQ+
Sbjct: 67 LAGIVASEDLDLVVIDHPLTPVQQRNLERRLKTKVIDRTGLILEIFGDRARTKEGRLQVD 126
Query: 213 IAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLK 261
+A L W + R + T++ +G +++ R + +R L+K L +++
Sbjct: 127 LAHL--TWQKSRLVRSWTHLERQRGGAGFMGGPGETQIEADRRQIQDRIIALQKQLEQVR 184
Query: 262 GQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGML 321
R++ R K+++ P VA+VGYTN GK+TL +T+ D ++ LFATLD T + L
Sbjct: 185 RTRDLHRKKRKKIPQPVVALVGYTNAGKSTLFNRMTESDVFA-KDLLFATLDPTLRKVAL 243
Query: 322 PNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDET 381
P+ I+ DT+GFIS++PT L+ F+ TLE+ + AD+I+HV D+S+PD Q + V +T
Sbjct: 244 PHGKEIILSDTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDISHPDTEAQAEDVKKT 303
Query: 382 LQHLELEEKILEHVLVVGNKVDAVPPGER------VTEEYDLLISATRGTGLAQLKEKV 434
L L ++ ++ V NK+D + P R +E + +SA G G+ QL +V
Sbjct: 304 LTDLGVDALTGAPIIEVWNKIDCLDPAYREKLLEDAGDEGPIALSALTGEGIEQLYTRV 362
>gi|227547539|ref|ZP_03977588.1| GTP-binding protein [Bifidobacterium longum subsp. longum ATCC
55813]
gi|239621149|ref|ZP_04664180.1| GTP-binding protein [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|227211949|gb|EEI79845.1| GTP-binding protein [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239515610|gb|EEQ55477.1| GTP-binding protein [Bifidobacterium longum subsp. infantis CCUG
52486]
Length = 501
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 174/363 (47%), Gaps = 28/363 (7%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR 156
W + + L E AL + G V D + D ++ G G + + V
Sbjct: 88 WSSAVTTQAKAEESLRELAALAETA-GAVVCDGLLQHRSKPDAATYVGSGKAKEIAGIV- 145
Query: 157 GDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
AR A + VD L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+
Sbjct: 146 --AREEADTIIVDDDLPPSQRRALEDAAKVKVVDRTAVILDIFAQHATSREGKAQVELAQ 203
Query: 216 LPYLWTRYR------------TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNK 259
L Y+ R R A ++G ++K R V+ R +L++ + +
Sbjct: 204 LEYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRTRIARLRRQIRE 263
Query: 260 LKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEG 319
+ RE+ R ++R PTVAVVGYTN GK++L LT LV N LFATLD
Sbjct: 264 MAPAREVKRGSRRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELVG-NALFATLDTAVRRA 322
Query: 320 MLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVD 379
+ YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q V+
Sbjct: 323 KTRDGRAYAYVDTVGFVRRLPTQLVEAFKSTLEEVAEADVILHVVDGSHPDPFSQVDAVN 382
Query: 380 ETLQHLELEEKILEHVLVVGNKVDAVPPGER----VTEEYDLLISATRGTGLAQLKEKVQ 435
+ L +E I ++V NK D R + ++SA G GL +L+ V+
Sbjct: 383 DVLADIEGTASIPR--ILVFNKADQADEATRERLAALQPDAFIVSAYTGEGLDELRTAVE 440
Query: 436 DMI 438
++
Sbjct: 441 SLL 443
>gi|373106600|ref|ZP_09520902.1| GTP-binding protein HflX [Stomatobaculum longum]
gi|371652294|gb|EHO17712.1| GTP-binding protein HflX [Stomatobaculum longum]
Length = 424
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 162/309 (52%), Gaps = 22/309 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++FGKG +E L+ + + + D L Q K L + V V DR MI++ I
Sbjct: 57 DSGTYFGKGKVEELRELL--LSLEADAVAADDELSPAQMKNLSEALGVKVMDRTMIILDI 114
Query: 198 FKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMER 249
F HA T E +LQ+ +A+L Y R + L+ R + R
Sbjct: 115 FAQHAVTAEGKLQVELAQLHYTQAHLLGMHSSLSRLGGGVGTRGPGEQKLELDRRAIRAR 174
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
L++ L +LK RE+ R ++++ VA+VGYTN GK+TL+ LTD ++ N+LF
Sbjct: 175 ISFLREKLGELKRHREVSRAQREKSGSYIVALVGYTNAGKSTLLNRLTDA-GILAENKLF 233
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD TT + LP +L DT+GFI +P L+E F TLE+A AD+I+HVVD S+P
Sbjct: 234 ATLDPTTRKLSLPGGEEVLVTDTVGFIRKLPHQLIEAFHSTLEEARYADLILHVVDASSP 293
Query: 370 DYLQQKQHVDETLQHLELEEKILE--HVLVVGNKVDAVPPGERVTEE----YDLLISATR 423
+ Q V ETL+ L K LE ++ V NK D +P E + ++ + ISA
Sbjct: 294 EADTQMAVVYETLREL----KALEDHSIIAVYNKTD-LPGTETLPKDIHAAASVRISAAT 348
Query: 424 GTGLAQLKE 432
G G+A LKE
Sbjct: 349 GEGIAALKE 357
>gi|295094268|emb|CBK83359.1| GTP-binding protein HflX [Coprococcus sp. ART55/1]
Length = 441
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 168/310 (54%), Gaps = 16/310 (5%)
Query: 142 FFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAH 201
+ G+G +E L+ + + T V D L Q LQD + V DR M+++ IF AH
Sbjct: 73 YLGRGKVEELREMIY-ELGATGVCCD-DELSPAQLMNLQDALDIKVMDRTMVILDIFAAH 130
Query: 202 AKTREARLQIAIAELPYLWTRYRTIEDATN--------MNITKGFLDSKRMVLMEREQKL 253
A + E +LQ+ +A+L + TR + D+ + + L+ R V+ +R +L
Sbjct: 131 AGSYEGKLQVELAQLKFRATRLVGMRDSLSRLGGGIGTRGPGEKKLEIDRRVIRDRISRL 190
Query: 254 KKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLD 313
K L ++ QR R ++QR P V +VGYTN GK+TL+ ALT ++ ++LFATLD
Sbjct: 191 KAELRNVESQRSQQRKQRQRSAVPVVGIVGYTNAGKSTLLNALTGA-GVLQEDKLFATLD 249
Query: 314 VTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQ 373
TT LP IL DT+GFI +P L+E F TLE+A D+I+HVVD S+ ++ +
Sbjct: 250 PTTRGYKLPGGQNILLTDTVGFIRKLPHHLVEAFGSTLEEAKYCDVILHVVDASDENWDK 309
Query: 374 QKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT-----EEYDLLISATRGTGLA 428
+ V TL+ L+++E + V+ V NK+D + + V + L ISA G GL
Sbjct: 310 NIETVYGTLKQLKIDENSGKPVITVFNKIDRISKDDLVGVRDLRADKTLYISAATGQGLP 369
Query: 429 QLKEKVQDMI 438
+L +++++
Sbjct: 370 ELANAIEEIL 379
>gi|421602666|ref|ZP_16045219.1| GTP-binding protein HFLX [Bradyrhizobium sp. CCGE-LA001]
gi|404265222|gb|EJZ30349.1| GTP-binding protein HFLX [Bradyrhizobium sp. CCGE-LA001]
Length = 415
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 181/365 (49%), Gaps = 31/365 (8%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQ 184
V D+ I + ++ GKG +E + ++ + V +D L QQ+ L+
Sbjct: 22 VADAIIAPISQIRPATYIGKGKVEEIAGLIKS---LEVELVVMDCALAPIQQRNLEKELH 78
Query: 185 VPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------ 238
V DR ++++IF AKTRE LQ+ +A L Y R R + T++ +G
Sbjct: 79 AKVLDRTGLILEIFGRRAKTREGSLQVELAHLNY--QRSRLVRSWTHLERQRGGFGFMGG 136
Query: 239 -----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLI 293
+++ R ++ ER KL+ L K++ R + R +QR + VA+VGYTN GK+TL
Sbjct: 137 PGETQIEADRRLIQERISKLESELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLF 196
Query: 294 KALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLED 353
LT D + + LFATLD T LP+ + + DT+GFISN+PT L+ F+ TLE+
Sbjct: 197 NRLTRAD-VQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEE 255
Query: 354 AMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP------- 406
+ AD+I+HV D+S+ D Q+ VD L+ L + ++ V NK+D
Sbjct: 256 VLEADVILHVRDISHEDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKIDRYDAEQREEL 315
Query: 407 ---PGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG-GSEYQWLM 462
R + +L+SA G G+ L +++ + A R + + + + G+ WL
Sbjct: 316 LNIAARRPEDHPAMLVSAATGEGIDALLAAIEERL--AAKRTTLDLSIDAADGAGISWLH 373
Query: 463 KHTAV 467
++ V
Sbjct: 374 RNAEV 378
>gi|358067190|ref|ZP_09153672.1| GTP-binding protein HflX [Johnsonella ignava ATCC 51276]
gi|356694614|gb|EHI56273.1| GTP-binding protein HflX [Johnsonella ignava ATCC 51276]
Length = 429
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 162/312 (51%), Gaps = 24/312 (7%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG L+ LK + + T V D L Q K L++ ++ V DR ++++ IF
Sbjct: 69 TYIGKGKLDELKLAI-FELDATGVICD-DELSPAQLKNLENELEIKVMDRTLLILDIFAQ 126
Query: 201 HAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQK 252
A T E ++Q+ +A+L YL R R + +D + ++ R
Sbjct: 127 RASTSEGKIQVELAQLKYLSARLAGMRASLSRLGGGIGTRGPGEKKIDIDKRIIHNRIGI 186
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
LK L ++K RE+ R K R+ T A+ GYTN GK+TL+ AL D D V N+LFATL
Sbjct: 187 LKAQLQEIKKHREITR--KTRKNIVTAAIWGYTNAGKSTLLNALADSDVFV-ENKLFATL 243
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D +T L + IL DT+GFI +P L+E F+ T E+A ADIIIH+VD SNP
Sbjct: 244 DPSTRRVKLKSGQEILVTDTVGFIRKLPHNLIEAFRSTFEEAAYADIIIHLVDASNPAAD 303
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT------EEYDLLISATRGTG 426
+ V E L+ ++ +K ++ V NK+D G T +Y + ISA G G
Sbjct: 304 EHMLVVYEALKSFDISDK---DIITVYNKIDI--AGTEFTLPRDFHSDYSIKISAKTGYG 358
Query: 427 LAQLKEKVQDMI 438
+ +LK+ ++ ++
Sbjct: 359 IDELKDLIEKIV 370
>gi|291519907|emb|CBK75128.1| GTP-binding protein HflX [Butyrivibrio fibrisolvens 16/4]
Length = 410
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 174/336 (51%), Gaps = 28/336 (8%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G +VV + +L + ++ G G ++ + + + T + V D L Q + L D
Sbjct: 39 GAQVVGQIMQNLERRNPGTYVGSGKVDEIADLI-WETGATGI-VCDDELTPAQMRNLADA 96
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF---- 238
V DR +I++ IF A A T E ++Q+ +A+L Y TR NM+ G
Sbjct: 97 LDTKVMDRTLIILDIFAARAGTAEGKIQVELAQLRYEMTRLTGF--GKNMSRVGGTAAGG 154
Query: 239 -------------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYT 285
L+ + ++ R +LKK L + RE+ R K+QR P A+VGYT
Sbjct: 155 GGAIGTRGPGEKKLEMDKRLIAGRISQLKKELADVVSHREITRAKRQRNGVPVAAIVGYT 214
Query: 286 NCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLE 345
N GK++L+ LTD ++ + LFATLD TT E +L N +IL DT+GFI +P L++
Sbjct: 215 NAGKSSLLNKLTDA-HILEWDALFATLDPTTRELLLDNDQKILLTDTVGFIRKLPHHLVD 273
Query: 346 PFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV 405
FK TLE+A AD IIHVVDVSNP +Q + V +TL L + +K +L + NKVD V
Sbjct: 274 AFKSTLEEAKYADYIIHVVDVSNPQMDRQMEIVYQTLDKLGVSDK---PILTIFNKVDKV 330
Query: 406 PPGERVTE---EYDLLISATRGTGLAQLKEKVQDMI 438
+ +Y + S G GL +++E + +++
Sbjct: 331 ADEHDYHDLRADYTVHTSIKTGKGLDRVREILAELL 366
>gi|293192306|ref|ZP_06609417.1| GTP-binding protein [Actinomyces odontolyticus F0309]
gi|292820221|gb|EFF79215.1| GTP-binding protein [Actinomyces odontolyticus F0309]
Length = 526
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 174/347 (50%), Gaps = 30/347 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G RV+D I + D ++ G G L VR V A V VD L
Sbjct: 121 AALAETAGSRVLDGIIQRRMKPDPATYLGSGKARELADIVRS---VEADTVIVDEELAPS 177
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 178 QRRGLEDVVDAKVVDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQA 237
Query: 235 -----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
TK LD +R + R KL+ + +++ R RN ++R P
Sbjct: 238 GGRVAGGAGIGSRGPGETKIELDRRR--IRTRMAKLRADIARMEPARRTQRNSRRRGAVP 295
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+VA+ GYTN GK+TL+ LTD LV ++ LFATLD T + D +GF+
Sbjct: 296 SVAIAGYTNAGKSTLLNRLTDAGVLV-QDALFATLDPTVRRARAADGREYTLTDAVGFVR 354
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
N+PT L+E F+ TLE+ ADII+HVVD ++PD + Q Q V + +E +I E L+
Sbjct: 355 NLPTQLVEAFRSTLEEVGQADIIVHVVDAAHPDPVSQVQAVRSVIDTIEGASEIPE--LI 412
Query: 398 VGNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
NK D P + R + +SA G G+ L+ ++DM+ +
Sbjct: 413 ALNKADLASPEQIALLRTVFPNAVPLSAHTGWGVEALRAALEDMLPR 459
>gi|392960682|ref|ZP_10326147.1| GTP-binding protein, HflX [Pelosinus fermentans DSM 17108]
gi|421054560|ref|ZP_15517528.1| GTP-binding proten HflX [Pelosinus fermentans B4]
gi|421059271|ref|ZP_15521882.1| GTP-binding protein, HflX [Pelosinus fermentans B3]
gi|421068476|ref|ZP_15529776.1| GTP-binding protein, HflX [Pelosinus fermentans A12]
gi|421071423|ref|ZP_15532542.1| GTP-binding proten HflX [Pelosinus fermentans A11]
gi|392440918|gb|EIW18578.1| GTP-binding proten HflX [Pelosinus fermentans B4]
gi|392442147|gb|EIW19738.1| GTP-binding protein, HflX [Pelosinus fermentans A12]
gi|392447097|gb|EIW24357.1| GTP-binding proten HflX [Pelosinus fermentans A11]
gi|392454579|gb|EIW31401.1| GTP-binding protein, HflX [Pelosinus fermentans DSM 17108]
gi|392459218|gb|EIW35649.1| GTP-binding protein, HflX [Pelosinus fermentans B3]
Length = 599
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 186/371 (50%), Gaps = 26/371 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D F G+G ++ + +R + V + D L QQ+ L+ + V DR +++ I
Sbjct: 231 DSALFIGRGKVQEISL-LRQEKNVNLIIFD-DELSPAQQRNLEKALGIKVLDRTALILDI 288
Query: 198 FKAHAKTREARLQIAIAELPY----------LWTRYRTIEDATNMNITKGFLDSKRMVLM 247
F A++ E +LQ+ +A+L Y + +R TK +D +R +
Sbjct: 289 FAQRARSHEGKLQVELAQLRYNLPRLGGQGLVLSRLGGGIGTRGPGETKLEVDRRR--IR 346
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
ER + K + +K QR + R +++ + PT+A+VGYTN GK+TL+ LT + L ++
Sbjct: 347 ERVSDITKQIEYIKKQRNLHRKRRETTRIPTIALVGYTNAGKSTLLNLLTASEVLA-EDK 405
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD TT L N + L DT+GFI +P L+ F+ TLE+ + ADI++HVVDVS
Sbjct: 406 LFATLDPTTRNITLTNGQQALITDTVGFIQKLPHQLIAAFRATLEEVVQADILLHVVDVS 465
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTE----EYDLLISATR 423
+P Y +Q V + L L ++ ++ ++ + NK D V V+ E ++ISA
Sbjct: 466 HPQYQEQSHAVFQVLHELNVD---IKQLITIFNKADKVEDSNSVSALLKTENSVMISALH 522
Query: 424 GTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLD 483
G G+ E + +I A +K I M + E + K +SN+ + + + +
Sbjct: 523 GHGI----EGLLLLIENAIKQKTIEMHLLIPYDESNVIAKLYDISNVHSTEYREDGIYVS 578
Query: 484 VVMTDVIMNKF 494
+ ++ N F
Sbjct: 579 ISLSPDQTNYF 589
>gi|156743087|ref|YP_001433216.1| small GTP-binding protein [Roseiflexus castenholzii DSM 13941]
gi|156234415|gb|ABU59198.1| small GTP-binding protein [Roseiflexus castenholzii DSM 13941]
Length = 454
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 164/304 (53%), Gaps = 22/304 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
AL++ G VV ST L + F G G +E + D + V D L Q
Sbjct: 50 ALLADTAGLDVVGSTYQRLKQPFPRYFIGPGKIEEIA--ALRDTLHYDLVVFDDELTPAQ 107
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYR----------- 224
+ ++D Q V DR +++ IF HA+T E R+Q+ +A+ YL R R
Sbjct: 108 ARNVEDALQTRVLDRTGLILDIFARHAQTHEGRVQVELAQYRYLLPRLRRQWTHLERQAG 167
Query: 225 -TIEDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
A + +G L+ R ++ R Q L++ + ++ RE+ R ++++ P V
Sbjct: 168 GGGASAGGVVGLRGPGETQLEVDRRLIARRIQWLEQQIEEVHRHREVYRERRRQSGIPVV 227
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL+ AL+ + + ++LFATLD TT + LP +IL DT+GFI +
Sbjct: 228 AIVGYTNAGKSTLLNALSGAN-VRAEDRLFATLDPTTRQVTLPGGQQILLTDTVGFIQKL 286
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+ F+ TLE+ AD+++HV+D+++P+ QQ Q V +TL+ L++E++ L V
Sbjct: 287 PTHLVAAFRATLEEIREADVVLHVLDITHPNAAQQTQTVLDTLRDLQVEDR---PTLTVL 343
Query: 400 NKVD 403
NKVD
Sbjct: 344 NKVD 347
>gi|443326320|ref|ZP_21054978.1| GTP-binding protein HflX [Xenococcus sp. PCC 7305]
gi|442794060|gb|ELS03489.1| GTP-binding protein HflX [Xenococcus sp. PCC 7305]
Length = 573
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 162/285 (56%), Gaps = 21/285 (7%)
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY------- 223
L Q + L+ F + V DR +++ IF A++R +LQ+ +A+L Y+ R
Sbjct: 291 LSPAQGRNLESQFGIRVVDRTEVILDIFAQRAQSRAGKLQVELAQLEYMLPRLVGRGQAM 350
Query: 224 -RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
R + L+++R + ++ L++ +N+L+ R +R ++Q+Q TVA+V
Sbjct: 351 SRLGGGIGTRGPGETKLETERRSIQKKITHLQRDVNELQAHRSRLRKQRQKQDIATVAIV 410
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL-----RILYVDTIGFIS 337
GYTN GK+TLI ALT+ D + ++LFATLD TT +P+ + IL DT+GFI
Sbjct: 411 GYTNAGKSTLINALTNSD-VYAADRLFATLDPTTRRLAIPDPVTGKPCNILLTDTVGFIQ 469
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
+P +L++ F+ TLE+ AD ++HVVD+S+P + Q + V + LQ + L + +L+
Sbjct: 470 ELPPSLVDAFRATLEEVTEADTLLHVVDLSHPSWQNQIRSVMKILQEMPLA---VGPMLL 526
Query: 398 VGNKVDAVPPG--ERVTEEYD--LLISATRGTGLAQLKEKVQDMI 438
V NK+D V + EEY L I+A GLA L+EK++++I
Sbjct: 527 VFNKLDQVDSETLAKAQEEYPLALFIAAKERLGLATLREKLRELI 571
>gi|357974354|ref|ZP_09138325.1| GTP-binding protein, HSR1-like [Sphingomonas sp. KC8]
Length = 432
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 186/389 (47%), Gaps = 28/389 (7%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD- 169
L E+ L ++I G VV+ L + FG G ++ + VR A V VD
Sbjct: 37 LDEAAGLAAAI-GVDVVEKMAFRLRDPKPATLFGSGQVDTIATAVR---MAEAELVIVDG 92
Query: 170 VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT- 221
L QQ+ L+ V V DR ++++IF A T E RLQ+ +A L Y WT
Sbjct: 93 ALSPIQQRNLEKALDVKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVRSWTH 152
Query: 222 --RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
R R +RM+ +R KL++ L + R + R ++QR +P +
Sbjct: 153 LERQRGGFGFLGGPGETQIEADRRMI-RDRMAKLRRELENVTRTRGLHRARRQRAPWPVI 211
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL +T +++ N LFATLD T + LP + + DT+GF+S++
Sbjct: 212 ALVGYTNAGKSTLFNRMTGA-TVMAENLLFATLDPTMRQISLPGIDKAILSDTVGFVSDL 270
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEH-VLVV 398
PT L+ F+ TLE+ AD+I+HV D+S+PD Q V L + + +
Sbjct: 271 PTQLVAAFRATLEEVTAADLIVHVRDISHPDTEAQAADVAAVLAEIGIGGGEGGIPIFEA 330
Query: 399 GNKVDAVPPGERV-----TEEYD--LLISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
NK+DA+ P + E D + ISA G G+ QL + + + + R ++ +
Sbjct: 331 WNKLDALAPDDAAHAMAEAERRDDVVAISALTGEGVDQLARAISGYLTQGSRRFSLLLDP 390
Query: 452 RSGGSEYQWLMKH--TAVSNIREDDTSAE 478
GG+ WL + V +R+D + E
Sbjct: 391 ADGGA-IAWLHANGEVLVQEMRDDQLAVE 418
>gi|429770952|ref|ZP_19302995.1| GTP-binding protein HflX [Brevundimonas diminuta 470-4]
gi|429183166|gb|EKY24233.1| GTP-binding protein HflX [Brevundimonas diminuta 470-4]
Length = 437
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 185/371 (49%), Gaps = 28/371 (7%)
Query: 131 IISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDR 190
I+ L S + G+G LE + + A AV + D L QQ+ L+ + + V DR
Sbjct: 53 IVRLRSVTPATLIGRGKLEEISALILA-ADAEAVVID-DQLTPVQQRNLERFWDIKVIDR 110
Query: 191 YMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------L 239
++++IF A+TRE RLQ+ +A L Y R R + T++ +G +
Sbjct: 111 TGLILEIFGRRARTREGRLQVELARLEY--ERSRLVRTWTHLERQRGGTGGTGGPGETQI 168
Query: 240 DSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDD 299
+ R ++ +R +LK L +++ R + R +++ FP+VA+VGYTN GK+TL LT
Sbjct: 169 ELDRRMIADRIVRLKAELEEVRRTRGLHRKARKQVPFPSVALVGYTNAGKSTLFNRLTGA 228
Query: 300 DSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADI 359
+ + ++ LFATLD T LP + DT+GF+S++P L+E F+ TLE+ AD+
Sbjct: 229 EVMA-KDLLFATLDTTQRTIRLPQGRPAIIADTVGFVSDLPHELVESFRATLEEVGEADL 287
Query: 360 IIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD---------AVPPGER 410
I+HV D+++PD Q + V+ L+ + E +L V NK+D V ER
Sbjct: 288 ILHVRDIASPDSAAQAKDVEAVLEQIPTPEGKTRRILEVWNKIDLLEAETRETVVGQAER 347
Query: 411 VTEE-YDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSN 469
+ E + +SA G G+ L++ + +I +T+ G WL + V+
Sbjct: 348 LAREGTAVAVSAWTGEGIEALRDTIASLI-DDDPETQLTVEPHR-GDLLAWLYANGRVTG 405
Query: 470 IREDDTSAEHL 480
DD HL
Sbjct: 406 RETDDDGRVHL 416
>gi|441521253|ref|ZP_21002914.1| GTP-binding protein HflX [Gordonia sihwensis NBRC 108236]
gi|441459085|dbj|GAC60875.1| GTP-binding protein HflX [Gordonia sihwensis NBRC 108236]
Length = 483
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 173/339 (51%), Gaps = 29/339 (8%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G +V+D+ I D ++ G G E L+ V T + L Q L+ +
Sbjct: 93 GSQVLDALIQRRGKPDPATYLGSGKAEELREVVVASGADT--VICDGELTPAQLTALEKV 150
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNI 234
+V V DR +++ IF HA +RE + Q+A+A++ Y+ R R ++ N
Sbjct: 151 VKVKVIDRTALILDIFAQHATSREGKAQVALAQMEYMLPRLRGWGESMSRQAGGRAGSNG 210
Query: 235 TKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
G +++ R + ER KL+K + +K R + R ++R P + VVGYTN
Sbjct: 211 GVGLRGPGETKIETDRRRIRERMAKLRKEIRGMKTARTVKRAARRRGGVPALTVVGYTNA 270
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GK++L+ A+T LV ++ LFATLD TT L + +++ DT+GF+ ++PT L+E F
Sbjct: 271 GKSSLVNAMTGSGVLV-QDALFATLDPTTRRAQLADGHEVVFTDTVGFVRHLPTQLVEAF 329
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQH-LELEEKILEHVLVVGNKVDAVP 406
+ TLE+A+ AD+++HVVD S+P Q V + L L E++ ++V NK+DAV
Sbjct: 330 RSTLEEAVDADLLVHVVDGSDPFPANQISAVRQVLGEVLAEEDRPAPPEMLVVNKIDAV- 388
Query: 407 PGERVT-----EEYD--LLISATRGTGLAQLKEKVQDMI 438
+ VT EY +SA G GL L + D +
Sbjct: 389 --DGVTMTALRAEYPDAQFVSARTGEGLDGLFAAITDFL 425
>gi|392426151|ref|YP_006467145.1| GTP-binding protein HflX [Desulfosporosinus acidiphilus SJ4]
gi|391356114|gb|AFM41813.1| GTP-binding protein HflX [Desulfosporosinus acidiphilus SJ4]
Length = 536
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 175/362 (48%), Gaps = 45/362 (12%)
Query: 102 KRNTTRDFMLA------------ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLE 149
K + R F+LA E A ++ G VV + S +SF G G LE
Sbjct: 174 KPDKERAFLLALQDGEQEVSENLEELAELADTAGVEVVGQLVQPRRSSQSRSFIGSGKLE 233
Query: 150 LLKRQV---RGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
L ++ R D V +S D L Q + L+ + + DR +++ IF A +RE
Sbjct: 234 ELVHRIQETRAD-----VLISDDELSPSQLRTLEMETGLKILDRTGLILDIFAQRAHSRE 288
Query: 207 ARLQIAIAEL----PYLWTRYRTIEDATNMNI------TKGFLDSKRMVLMEREQKLKKA 256
+LQ+ +A+L PYL + +T+ TK LD +RM +R L K
Sbjct: 289 GKLQVELAQLKHLLPYLTGQGQTLSRLGGGIGSRGPGETKLELDRRRM--RQRINLLDKE 346
Query: 257 LNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL---VP--RNQLFAT 311
L + RE+ R ++ + P +A+VGYTN GKTT +K + +P N+LFAT
Sbjct: 347 LKLVLQHREIQRRQRAKSGLPMIALVGYTNAGKTTFMKNAMEQAGFRSDIPSGENKLFAT 406
Query: 312 LDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDY 371
LD L L IL DT+GFI +PT LL+ F TLE+ ADI+IHV+DVS+P
Sbjct: 407 LDPIVRRIKLTPSLEILLSDTVGFIRKLPTQLLKAFLATLEEVQQADILIHVLDVSHPQA 466
Query: 372 LQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTE-----EYDLLISATRGTG 426
LQQ + V E L LE +K V+ + NKVD V E ++ Y + +S RG
Sbjct: 467 LQQAETVHEILGQLECHDK---PVITLLNKVDKVHDDEEISRIAQLLPYSIPLSLKRGDS 523
Query: 427 LA 428
LA
Sbjct: 524 LA 525
>gi|238027077|ref|YP_002911308.1| GTP-binding proten HflX [Burkholderia glumae BGR1]
gi|237876271|gb|ACR28604.1| GTP-binding proten HflX [Burkholderia glumae BGR1]
Length = 398
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 189/364 (51%), Gaps = 36/364 (9%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D F G G E L+ + DA + + L QQ+ L+ V DR +++
Sbjct: 49 SPDAAMFIGSGKAEELR--LACDANEIDIVIFNHPLAPAQQRNLERTLNRRVVDRTSLIL 106
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMV 245
IF A++ E +LQ+ +A+L YL TR I T++ KG L++ R +
Sbjct: 107 DIFAQRARSHEGKLQVELAQLQYLSTRL--IRAWTHLERQKGGIGLRGPGETQLETDRRL 164
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR 305
+ ER + LK L+KL+ Q R +++R + +V++VGYTN GK+TL ALT +
Sbjct: 165 IGERIKMLKSRLDKLRRQHNTQRRQRERNRTMSVSLVGYTNAGKSTLFNALTKAQAYAA- 223
Query: 306 NQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
+QLFATLD T+ L + + +I+ DT+GFI +P L+ F+ TLE+ + AD+++HVV
Sbjct: 224 DQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVV 283
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP----GERVT-EEYD--- 416
D S+ L+Q + V++ L E+ + VLV NK+DAVP G+ V +EY
Sbjct: 284 DASSAVRLEQIEQVNDVLH--EIGADAIRQVLVF-NKIDAVPELAARGDAVERDEYGNIS 340
Query: 417 -LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDT 475
+ +SA G GL L+ + ++ AT + + SG + ++ R+D T
Sbjct: 341 RVFLSARSGQGLDALRSAIAEI---ATSDQQL-----SGAVSLPEPTRDGGLAEPRDDHT 392
Query: 476 SAEH 479
+EH
Sbjct: 393 VSEH 396
>gi|339503334|ref|YP_004690754.1| GTP-binding protein HflX [Roseobacter litoralis Och 149]
gi|338757327|gb|AEI93791.1| GTP-binding protein HflX [Roseobacter litoralis Och 149]
Length = 432
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 193/389 (49%), Gaps = 26/389 (6%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D LAE+ +L ++ VV S I+ L + FG G ++ +K + D V V V
Sbjct: 36 DHALAEAVSLARALPELEVVGSEIVPLKTVRAGMLFGSGKIDQIKTTLH-DEEVELVLVD 94
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIE 227
V + QQ+ L+ + V + DR ++++IF A TRE LQ+ +A L Y R R +
Sbjct: 95 GAVSPV-QQRNLEKAWGVKLLDRTGLILEIFSDRAATREGVLQVEMAALSY--QRTRLVR 151
Query: 228 DATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
T++ +G +++ R + ++ +L++ L K+ R + R + + +
Sbjct: 152 AWTHLERQRGGLGFVGGPGETQIEADRRAIDDQLTRLRRQLEKVVKTRALHRAARAKIPY 211
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P +A+VGYTN GK+TL LT D ++ ++ LFATLD T LP+ ++ DT+GFI
Sbjct: 212 PIIALVGYTNAGKSTLFNHLTGAD-VMAKDMLFATLDPTMRRLRLPDGPEVILSDTVGFI 270
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
S +PT L+ F+ TLE+ + AD+I HV D+S+P+ Q + V + + L +E+
Sbjct: 271 SELPTELVAAFRATLEEVLAADVICHVRDISHPETDAQAKDVQDIMTTLGVEDD--RPAF 328
Query: 397 VVGNKVDAVPPGE----RVTEEYD---LLISATRGTGLAQLKEKVQDMILKATGRKNITM 449
+ NK+D + + R + D ISA G GL L E + L+ R+
Sbjct: 329 EIWNKLDLLSEEDADAMRARADRDPAVFAISALSGEGLDGLLEAIT-QTLQGQKREATLS 387
Query: 450 RVRSGGSEYQWLMKHTAVSNIREDDTSAE 478
+ G + WL + VS R+ D E
Sbjct: 388 LAFADGKKRAWLFEQELVSGERQTDDGFE 416
>gi|384218932|ref|YP_005610098.1| GTP-binding protein HFLX [Bradyrhizobium japonicum USDA 6]
gi|354957831|dbj|BAL10510.1| GTP-binding protein HFLX [Bradyrhizobium japonicum USDA 6]
Length = 459
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 217/467 (46%), Gaps = 54/467 (11%)
Query: 66 ESDEFKTIRDEAQTGALGTDHQVFVVQPFIK-----WGKKMKRNTTRDF--MLAESKALV 118
E F D ++ +V V+ P+++ + + + RD L E+ L
Sbjct: 2 EPRNFDGEADRPRSAGAKQTGRVLVIGPYLRVRAGGADTQSESHVQRDAEARLDEAAGLA 61
Query: 119 SSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-------- 170
+I + D+ I + ++ GKG +E + A+ S+DV
Sbjct: 62 RAID-LVIADAIIAPISQIRPATYIGKGKVE----------EIAALAKSLDVELVVMDCA 110
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
L QQ+ L+ V DR ++++IF AKTRE LQ+ +A L Y R R + T
Sbjct: 111 LAPIQQRNLEKELHAKVLDRTGLILEIFGRRAKTREGSLQVELAHLNY--QRSRLVRSWT 168
Query: 231 NMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +G +++ R ++ ER KL+ L K++ R + R +QR + V
Sbjct: 169 HLERQRGGFGFMGGPGETQIEADRRLIQERISKLEGELKKVQATRRLHRAGRQRVPYRVV 228
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL LT D + + LFATLD T LP+ + + DT+GFISN+
Sbjct: 229 ALVGYTNAGKSTLFNRLTRAD-VQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNL 287
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+ F+ TLE+ + A++I+HV D+S+ D Q+ VD L+ L + ++ V
Sbjct: 288 PTQLVAAFRATLEEVLEANVILHVRDISHEDAEAQQSDVDAVLRQLGINPDDSGRIIEVW 347
Query: 400 NKVDAVP----------PGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITM 449
NK+D R + +L+SA G G+ L +++ + A R + +
Sbjct: 348 NKIDRYDAEQREELLNIAARRPEDHPAMLVSAVSGEGIDALLAAIEERL--AAKRTTLDL 405
Query: 450 RVRSG-GSEYQWLMKHTAVSNIREDDTSAEHLL-LDVVMTDVIMNKF 494
+ + G+ WL ++ V D + + +D D+++N+F
Sbjct: 406 SIDAADGAGISWLHRNAEVLAKELHDGRFDMTVRVDETKRDIVVNRF 452
>gi|414162676|ref|ZP_11418923.1| GTP-binding protein HflX [Afipia felis ATCC 53690]
gi|410880456|gb|EKS28296.1| GTP-binding protein HflX [Afipia felis ATCC 53690]
Length = 463
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 209/417 (50%), Gaps = 45/417 (10%)
Query: 84 TDHQVFVVQPFIKWGKKMKRNTT---------RD--FMLAESKALVSSIQGWRVVDSTII 132
T +V VV P+ ++++R + RD L E+ L +I VV++ I
Sbjct: 22 TAGRVLVVGPY----RRLRRGSADIASQTDAVRDPEARLDEAAGLARAID-LVVVEALIA 76
Query: 133 SLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYM 192
L ++ G G +E + ++ + + V L QQ+ L+ + V V DR
Sbjct: 77 PLSEIRPATYLGTGKVEEILGLIK--SHEVELVVMDCALSPIQQRNLEKEWNVKVLDRTG 134
Query: 193 IVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDS 241
++++IF AKTRE LQ+ +A L ++ R R + T++ +G +++
Sbjct: 135 LILEIFGRRAKTREGTLQVELAHL--IYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEA 192
Query: 242 KRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDS 301
R ++ ER +++ L K++ R + R +QR + VA+VGYTN GK+TL LT +
Sbjct: 193 DRRMIGERITRIENDLKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRAE- 251
Query: 302 LVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIII 361
+ + LFATLD T LP+ + + DT+GFIS++PT L+ F+ TLE+ + AD+I+
Sbjct: 252 VQAADMLFATLDPTLRALKLPHGGKAMISDTVGFISDLPTMLVAAFRATLEEVIEADVIL 311
Query: 362 HVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE----------RV 411
HV D+S+ D Q++ VD+ L+ L ++ ++ V NK+D P E R
Sbjct: 312 HVRDISHEDAEAQERDVDQVLRQLSIDTDAGHRLIEVWNKIDRFSPEERENLARIAARRP 371
Query: 412 TEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV-RSGGSEYQWLMKHTAV 467
E L+SA G G+ L +++ + A R + +R+ + G+ W+ ++ V
Sbjct: 372 PERPCFLVSAETGEGIDALLAAIEERL--AATRITLDLRIDATDGAGISWIHRNAEV 426
>gi|153003095|ref|YP_001377420.1| HSR1-like GTP-binding protein [Anaeromyxobacter sp. Fw109-5]
gi|152026668|gb|ABS24436.1| GTP-binding protein HSR1-related [Anaeromyxobacter sp. Fw109-5]
Length = 599
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 192/375 (51%), Gaps = 27/375 (7%)
Query: 68 DEFKTIRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVV 127
+EF R +TG G + + V +G K + + L E K L + G V+
Sbjct: 172 EEFARARAVRRTG--GRERAILV-----GFGGKGRSRADAESSLEELKELART-AGVEVI 223
Query: 128 DSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVP 186
D+T+ D + GKG LE + V ++ A + D L Q + + + +
Sbjct: 224 DATVQLRRDPDPRYLIGKGKLEDV---VLRSMQLMATVIVFDAELSPSQARHIAEATSLK 280
Query: 187 VFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--------MNITKGF 238
+ DR +++ IF A++ + +LQ+ +A+L YL+ R +D+ + +
Sbjct: 281 ILDRTQLILDIFAQRAQSADGKLQVELAQLKYLYPRLVGRDDSLSRLAGGIGGRGPGETK 340
Query: 239 LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTD 298
L+ R + +R L++ + L R++ R ++ + P +++VGYTN GK+TL+ ALTD
Sbjct: 341 LEIDRRRVRDRITALERRIEALGSSRQLRRKQRNGRGLPVLSIVGYTNAGKSTLLNALTD 400
Query: 299 DDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLAD 358
+++ ++LFATLD T+ P ++ DT+GFI ++P L+ F+ TLE+ AD
Sbjct: 401 S-AVLAEDKLFATLDPTSRRLRFPRDREVIITDTVGFIRDLPPDLVNAFRATLEELSDAD 459
Query: 359 IIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEY--- 415
+++HVVD S+P + +Q + V+ L L LE+K L+V NK D +PPGE +
Sbjct: 460 LLLHVVDASDPRHPEQIEAVETILASLGLEQK---QRLLVFNKADRLPPGEGAALAHRAE 516
Query: 416 DLLISATRGTGLAQL 430
+ +SA GLA+L
Sbjct: 517 GIAVSALSRDGLAEL 531
>gi|148656458|ref|YP_001276663.1| small GTP-binding protein [Roseiflexus sp. RS-1]
gi|148568568|gb|ABQ90713.1| small GTP-binding protein [Roseiflexus sp. RS-1]
Length = 454
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 181/349 (51%), Gaps = 32/349 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
AL++ G VV ST L + F G G +E + D + V D L Q
Sbjct: 50 ALLADTAGLDVVGSTYQRLKHPFPRYFIGPGKIEEIA--ALRDTLQYDLVVFDDELTPGQ 107
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYR----------- 224
+ ++D Q V DR +++ IF HA+T E R+Q+ +A+ YL R R
Sbjct: 108 ARNVEDALQTRVLDRTGLILDIFARHAQTHEGRVQVELAQYRYLLPRLRRQWTHLERQAG 167
Query: 225 -TIEDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
A + +G L+ R ++ R Q L++ + ++ RE+ R ++++ P +
Sbjct: 168 GGGSSAGGVVGLRGPGETQLEVDRRLIARRIQWLEQQIEEVHRHREVYRERRRQSGIPVI 227
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL+ AL+ + + ++LFATLD TT + LP + L DT+GFI +
Sbjct: 228 AIVGYTNAGKSTLLNALSGAN-VRAEDRLFATLDPTTRQVTLPGGQQALLTDTVGFIQKL 286
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+ F+ TLE+ AD+++HV+D+++P+ QQ Q V +TL+ L +E++ ++ V
Sbjct: 287 PTQLVAAFRATLEEIREADVLLHVLDITHPNAAQQTQTVLDTLRDLHVEDR---PIITVL 343
Query: 400 NKVDAVP-----PGERVTEEYDL-----LISATRGTGLAQLKEKVQDMI 438
NKVD + ERV E + +SA +G GL L +++ +
Sbjct: 344 NKVDLMAGMNEVETERVAEALGMPDDYVAVSARKGWGLDTLLSRIEQTL 392
>gi|255101348|ref|ZP_05330325.1| putative GTP-binding protein [Clostridium difficile QCD-63q42]
gi|255307224|ref|ZP_05351395.1| putative GTP-binding protein [Clostridium difficile ATCC 43255]
Length = 423
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 207/419 (49%), Gaps = 41/419 (9%)
Query: 104 NTTRDF--MLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARV 161
N + DF ++ E + L S+ VV S + ++ + G G +E + ++ +
Sbjct: 14 NKSEDFNELMIELENLCSACD-IDVVGSITQNAKQVNRAFYIGTGKVEEILNLIKKENIE 72
Query: 162 TAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWT 221
+F + L Q K L++ + DR +++ IF AKTREA+LQ+ +A L Y+
Sbjct: 73 IVIFY--NELSTSQLKNLEEKLNCEIIDRTALILDIFAQRAKTREAKLQVEVASLKYMLP 130
Query: 222 RYRTIEDATNMNITKGFLDSK------------RMVLMEREQKLKKALNKLKGQREMMRN 269
R I N+ G + +K R + E+ L + L+ LK QRE R+
Sbjct: 131 RL--IGSNENLGRQSGGVGTKNRGSGEKKLELDRRRIEEKITSLNRELDDLKFQRETQRS 188
Query: 270 KKQRQKFPTVAVVGYTNCGKTTLIKALTD------DDSLVPRNQLFATLDVTTHEGMLPN 323
+++ P VA+VGYTN GK++++ L D + + +N LFATL+ + +L N
Sbjct: 189 MRRKSNLPNVALVGYTNAGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLAN 248
Query: 324 RLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQ 383
L DT+GF+SN+P L++ F+ TLE+A AD+++HV+D+SNP Y + ++TL+
Sbjct: 249 NKEFLLSDTVGFVSNLPHDLVKAFRSTLEEACEADVLLHVIDISNPSYKSHIKVTEDTLK 308
Query: 384 HLELEEKILEHVLVVGNKVDA--VPPGERVTEEYD---LLISATRGTGLAQLKEKVQDMI 438
+ + + HV NK+D V +R+ + D + +S + + ++ + + D I
Sbjct: 309 QIGADGIPMIHVY---NKIDLIDVEVLDRILDSIDKEGIFVSVKKDINIDKMIKCICDSI 365
Query: 439 LKATGRKNITMRVRSGGSEYQWLMKHTAVSNI--REDDTSAEHLLLDVVMTDVIMNKFK 495
K R + G + ++T++ N RED +LDV +++ NK+K
Sbjct: 366 FKDYVRCKFLIPYDKGHV-VSYFNENTSIINTEYREDGA-----ILDVECSNIEYNKYK 418
>gi|295689384|ref|YP_003593077.1| GTP-binding proten HflX [Caulobacter segnis ATCC 21756]
gi|295431287|gb|ADG10459.1| GTP-binding proten HflX [Caulobacter segnis ATCC 21756]
Length = 446
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 198/397 (49%), Gaps = 32/397 (8%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VV++ I L + + FGKG +E + AVF D L QQ+ L+ +V
Sbjct: 56 VVEALIAPLRAVTPATLFGKGKVEEFAAICEVEHIDVAVFD--DQLTPIQQRNLEKALEV 113
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
V DR ++++IF A+TRE +LQ+ +A L Y R R + T++ +G
Sbjct: 114 KVVDRTGLILEIFARRARTREGKLQVELARLDY--ERSRLVRTWTHLERQRGGTGSTGGP 171
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
++ R ++ KLK+ L +++ R + R+ +++ +PTVA+VGYTN GK+TL
Sbjct: 172 GETQIEIDRRLIAGTIIKLKRELEEVRRTRTLHRSARKKVPYPTVALVGYTNAGKSTLFN 231
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT+ + L ++ LFATLD T LP+ + DT+GFIS++P L+E F+ TLE+
Sbjct: 232 RLTEAEVLA-KDMLFATLDPTLRTVKLPDGRPAIMSDTVGFISDLPHELVEAFRATLEEV 290
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEE 414
AD+++HV DV+NPD Q + V+ L L + + V+ V NK+D + +R E
Sbjct: 291 QEADVVLHVRDVANPDSEAQARDVETVLSELGVTLDGGKTVVEVWNKIDLLSEDDREIIE 350
Query: 415 YDL------LISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG---GSEYQWLMKHT 465
+SA G G L +V +I + + VR G G W+ ++
Sbjct: 351 GQARRVGASPVSAVTGEGCEALLRRVGGLI-----DDSPPVEVRLGPQDGQALAWIYRNG 405
Query: 466 AVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSR 502
V R D E +L+ + + +F+ +F +R
Sbjct: 406 RVLG-RHDGEGGEVMLI-ARLDGQALGRFERQFPEAR 440
>gi|126655845|ref|ZP_01727284.1| GTP-binding protein, HSR1-related [Cyanothece sp. CCY0110]
gi|126623324|gb|EAZ94029.1| GTP-binding protein, HSR1-related [Cyanothece sp. CCY0110]
Length = 527
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 125/375 (33%), Positives = 202/375 (53%), Gaps = 35/375 (9%)
Query: 85 DHQVFVVQPFIKWGKKMKRNTTRDFM--LAESKALVSSIQGWRVVDSTIISLLSFD-KKS 141
DH+ V+ G + ++ + R F LAE + LV + G V TI S ++
Sbjct: 158 DHERVVI-----VGLQTEKMSDRTFAEELAEVERLVETAGGETV--ETIQQKRSHPHPQT 210
Query: 142 FFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAH 201
GKG +E + +V+ VF S+D L Q + L+ V V DR +++ IF
Sbjct: 211 VVGKGKVEEVALRVQTLGANLVVF-SID-LSPAQVRNLETQLGVKVVDRTEVILDIFAQR 268
Query: 202 AKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQKL 253
A++R +LQ+ +A+L Y+ R R + L+++R + R +L
Sbjct: 269 AQSRAGKLQVELAQLEYMLPRLVGRGQAMSRLGGGIGTRGPGETKLETERRGIQRRISRL 328
Query: 254 KKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLD 313
++ +NKL+ R +R ++Q+Q+ PT+A+VGYTN GK+TLI ALT+ + + +QLFATLD
Sbjct: 329 QQEVNKLQSHRSRLRQQRQKQEVPTIAIVGYTNAGKSTLINALTNAE-VYTADQLFATLD 387
Query: 314 VTTH--EGMLPNRLRI---LYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSN 368
TT G+ + ++ L DT+GFI +P +L++ F+ TLE+ AD ++H+VD+S+
Sbjct: 388 PTTRRLSGIDSDTQQLYTFLLTDTVGFIHELPPSLVDAFRATLEEVTEADALLHLVDLSH 447
Query: 369 PDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE--RVT-EEYDL--LISATR 423
P + Q V LQ + L + +L+V NK+D V GE RV EEY L ISA++
Sbjct: 448 PAWQHHIQSVMTILQEMPL---VPGPILLVFNKIDTV-DGETLRVAQEEYPLAVFISASQ 503
Query: 424 GTGLAQLKEKVQDMI 438
GL L+ K+ ++
Sbjct: 504 RLGLETLRSKLGQLV 518
>gi|87199949|ref|YP_497206.1| small GTP-binding protein domain-containing protein
[Novosphingobium aromaticivorans DSM 12444]
gi|87135630|gb|ABD26372.1| Small GTP-binding protein domain [Novosphingobium aromaticivorans
DSM 12444]
Length = 426
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 190/377 (50%), Gaps = 30/377 (7%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD- 169
L E + L +I G VV++ I+ + + + FG+G +E R + A V VD
Sbjct: 22 LEEGQGLARAI-GIEVVEAFILPIRTVRPATLFGEGQVE---RIAVACNQSDAELVIVDG 77
Query: 170 VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT- 221
L QQ+ L++ + V DR ++++IF A T E RLQ+ +A L Y WT
Sbjct: 78 ALSAIQQRNLEEKLKRKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVRSWTH 137
Query: 222 --RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
R R + +++ R ++ R +L++ L +++ R + R ++QR +P +
Sbjct: 138 LERQRGGFGFLGGP-GETQIEADRRLIRNRMARLRRELEQVRRTRGLHRERRQRAPWPVI 196
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL LT D ++ + LFATLD T LP + + DT+GFIS++
Sbjct: 197 ALVGYTNAGKSTLFNRLTGAD-VMAEDLLFATLDPTMRAIRLPGVEKAILSDTVGFISDL 255
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV- 398
PT L+ F+ TLE+ AD+I+HV DV+N QK V++ L L + + + +V
Sbjct: 256 PTQLVAAFRATLEEVTAADVIVHVRDVANLASADQKAEVEQILADLGVIGEAGSTIPIVE 315
Query: 399 -GNKVDAVPPGE----------RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNI 447
NK D + P E ++ E + ISA G G+ L +K+ +M+ + +
Sbjct: 316 AWNKWDLLTPEEQAMRQDLIAAKIAEVPVVPISALTGAGVETLLDKLGEMLTGSAQTLEL 375
Query: 448 TMRVRSGGSEYQWLMKH 464
T+ + S G WL H
Sbjct: 376 TVPL-SDGQRLAWLHAH 391
>gi|395784503|ref|ZP_10464341.1| GTP-binding protein HflX [Bartonella melophagi K-2C]
gi|395423753|gb|EJF89947.1| GTP-binding protein HflX [Bartonella melophagi K-2C]
Length = 446
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 156/287 (54%), Gaps = 22/287 (7%)
Query: 163 AVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTR 222
A+ V VL QQ+ L+ L+ V DR ++++IF A+T+E +LQ+ +A L Y +
Sbjct: 95 ALAVVDHVLTPVQQRNLEKLWSCKVIDRTGLILEIFGRRARTKEGKLQVELAHLSY--QK 152
Query: 223 YRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKK 271
R + T++ +G ++S R +L ++ ++++ L + R + R K+
Sbjct: 153 SRLVRSWTHLERQRGGSGFLGGPGETQIESDRRLLQDKITRIRRELKNVVKTRALHRAKR 212
Query: 272 QRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVD 331
++ P VA+VGYTN GK+TL L+D L ++ LFATLD T + +LP+ I D
Sbjct: 213 KKTSHPVVALVGYTNAGKSTLFNRLSDAGVLT-KDMLFATLDPTLRKVILPHGQTIFLSD 271
Query: 332 TIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKI 391
T+GFISN+PT L+ FK TLE+ + AD+IIHV D+S+PD+ Q Q V E L L +
Sbjct: 272 TVGFISNLPTHLIAAFKATLEEVIEADLIIHVKDISDPDHRAQAQDVLEILSSLGVNIGN 331
Query: 392 LEHVLVVGNKVD--------AVPPGERVTEEYDLLISATRGTGLAQL 430
+H++ V NK D + R L+ISA G L QL
Sbjct: 332 TDHIVEVWNKADMLDEHTLNVLQTSARTLLNPALMISARTGEELNQL 378
>gi|227530101|ref|ZP_03960150.1| GTP-binding protein HflX [Lactobacillus vaginalis ATCC 49540]
gi|227349983|gb|EEJ40274.1| GTP-binding protein HflX [Lactobacillus vaginalis ATCC 49540]
Length = 424
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 171/344 (49%), Gaps = 31/344 (9%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D+ + E L + +V+D S+ + ++FG G ++ +K V A + ++
Sbjct: 23 DYSMTELAELTQA-NHMKVIDRIDQSIDRPNPATYFGSGKVDEIKEAVL--AENVSTVIT 79
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIE 227
D L Q + L+D V DR ++++IF A+++EA+LQ+ IAEL Y R +T
Sbjct: 80 NDELTPSQLRNLEDELGCRVLDRTALILEIFAERAQSKEAKLQVQIAELQYRLPRLQTSA 139
Query: 228 DA------------TNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQK 275
+ TN + L+ R + L+K L + E+ R ++ +
Sbjct: 140 NQRLDQQTGGGSGFTNRGSGETKLEMNRRTIQNSISHLRKELRVIDRSEEVKRKQRDKSA 199
Query: 276 FPTVAVVGYTNCGKTTLIKALTD------DDSLVPRNQLFATLDVTTHEGMLPNRLRILY 329
PT A+VGYTN GK+T++ L + D ++ ++ LFATLD + + LP++ R L
Sbjct: 200 IPTAALVGYTNAGKSTIMNGLVEKYGAGEDKTVFEKDMLFATLDTSVRQLTLPDQKRFLL 259
Query: 330 VDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEE 389
DT+GF+S +PT L+E FK TL +A AD++I V+D S+P Y + ETL+ + +E
Sbjct: 260 SDTVGFVSKLPTHLVESFKSTLAEAANADLLIQVIDASDPHYEDMMKTTQETLKQIGIEN 319
Query: 390 KILEHVLVVGNKVDAVPP----------GERVTEEYDLLISATR 423
+ +V +K D P + E DLL+SA R
Sbjct: 320 IPMLYVFNKADKTDMEYPVLEGDDQIVISAKDDESLDLLVSAIR 363
>gi|213691733|ref|YP_002322319.1| small GTP-binding protein [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|384198875|ref|YP_005584618.1| GTP-binding protein [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|213523194|gb|ACJ51941.1| small GTP-binding protein [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|320457827|dbj|BAJ68448.1| GTP-binding protein [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
Length = 501
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 174/363 (47%), Gaps = 28/363 (7%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR 156
W + + L E AL + G V D + D ++ G G + + V
Sbjct: 88 WSSAVTTQAKAEESLRELAALAET-AGAVVCDGLLQHRSKPDAATYVGSGKAKEIADIV- 145
Query: 157 GDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
AR A + VD L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+
Sbjct: 146 --AREEADTIIVDDDLPPSQRRALEDAAKVKVVDRTAVILDIFAQHATSREGKAQVELAQ 203
Query: 216 LPYLWTRYR------------TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNK 259
L Y+ R R A ++G ++K R V+ R +L++ + +
Sbjct: 204 LEYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRTRIARLRRQIRE 263
Query: 260 LKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEG 319
+ RE+ R ++R PTVAVVGYTN GK++L LT LV N LFATLD
Sbjct: 264 MAPAREVKRGSRRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRA 322
Query: 320 MLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVD 379
+ YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q V+
Sbjct: 323 KTRDGRAYAYVDTVGFVRRLPTQLVEAFKSTLEEVAEADVILHVVDGSHPDPFSQVDAVN 382
Query: 380 ETLQHLELEEKILEHVLVVGNKVDAVPPGER----VTEEYDLLISATRGTGLAQLKEKVQ 435
+ L +E I ++V NK D R + ++SA G GL +L+ V+
Sbjct: 383 DVLADIEGTASIPR--ILVFNKADQADETTRERLAALQPDAFIVSAYTGEGLDELRTAVE 440
Query: 436 DMI 438
++
Sbjct: 441 SLL 443
>gi|300023207|ref|YP_003755818.1| GTP-binding proten HflX [Hyphomicrobium denitrificans ATCC 51888]
gi|299525028|gb|ADJ23497.1| GTP-binding proten HflX [Hyphomicrobium denitrificans ATCC 51888]
Length = 467
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 181/348 (52%), Gaps = 24/348 (6%)
Query: 106 TRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVF 165
T + L+E+ L ++I ++DS I+ + + G G ++ L +VR D + V
Sbjct: 57 TPENRLSEAVGLANAID-LDIIDSAIVPMSEPRPSTLLGSGKVDELGGRVR-DLDIGLVV 114
Query: 166 VSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY------- 218
V L QQ+ L+ + V DR ++++IF A A+TRE LQ+ +A L Y
Sbjct: 115 VD-HALTPVQQRNLEKAWNTKVVDRTGLILEIFGARARTREGVLQVELAHLSYQKGRLVR 173
Query: 219 LWT---RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQK 275
WT R R KRM L +R +K+ L + R++ R +++
Sbjct: 174 AWTHLERQRGGGGFLGGPGEAQIELDKRM-LQDRIDAIKRDLKDVVRTRDLHRKGRRKVP 232
Query: 276 FPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGF 335
+P VAVVGYTN GK+TL +T +V +Q+FATLD T E LP+ RI+ DT+GF
Sbjct: 233 YPIVAVVGYTNAGKSTLFNKITGA-GVVAMDQVFATLDPTMREVKLPSARRIILSDTVGF 291
Query: 336 ISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILE-H 394
IS++PT+L+ F+ TLE+ + AD+I+HV D+++ + Q + V++ L L ++ ++ H
Sbjct: 292 ISDLPTSLVAAFRATLEEVVEADLILHVRDIAHEETEAQARDVEKVLSELGIDTLPVDGH 351
Query: 395 VLVVGNKVDAVPPGERV--------TEEYDLLISATRGTGLAQLKEKV 434
+ V NK+D + R E +L+SA G G+ L + +
Sbjct: 352 IQEVWNKIDLLTGDRRAELQHEAQRNERPPVLVSAVTGEGIVPLLDAI 399
>gi|126699826|ref|YP_001088723.1| GTP-binding protein, HflX type [Clostridium difficile 630]
gi|115251263|emb|CAJ69094.1| putative GTP-binding protein, HflX type [Clostridium difficile 630]
Length = 425
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 207/419 (49%), Gaps = 41/419 (9%)
Query: 104 NTTRDF--MLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARV 161
N + DF ++ E + L S+ VV S + ++ + G G +E + ++ +
Sbjct: 16 NKSEDFNELMIELENLCSACD-IDVVGSITQNAKQVNRAFYIGTGKVEEILNLIKKENIE 74
Query: 162 TAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWT 221
+F + L Q K L++ + DR +++ IF AKTREA+LQ+ +A L Y+
Sbjct: 75 IVIFY--NELSTSQLKNLEEKLNCEIIDRTALILDIFAQRAKTREAKLQVEVASLKYMLP 132
Query: 222 RYRTIEDATNMNITKGFLDSK------------RMVLMEREQKLKKALNKLKGQREMMRN 269
R I N+ G + +K R + E+ L + L+ LK QRE R+
Sbjct: 133 RL--IGSNENLGRQSGGVGTKNRGSGEKKLELDRRRIEEKITSLNRELDDLKFQRETQRS 190
Query: 270 KKQRQKFPTVAVVGYTNCGKTTLIKALTD------DDSLVPRNQLFATLDVTTHEGMLPN 323
+++ P VA+VGYTN GK++++ L D + + +N LFATL+ + +L N
Sbjct: 191 MRRKSNLPNVALVGYTNAGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLAN 250
Query: 324 RLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQ 383
L DT+GF+SN+P L++ F+ TLE+A AD+++HV+D+SNP Y + ++TL+
Sbjct: 251 NKEFLLSDTVGFVSNLPHDLVKAFRSTLEEACEADVLLHVIDISNPSYKSHIKVTEDTLK 310
Query: 384 HLELEEKILEHVLVVGNKVDA--VPPGERVTEEYD---LLISATRGTGLAQLKEKVQDMI 438
+ + + HV NK+D V +R+ + D + +S + + ++ + + D I
Sbjct: 311 QIGADGIPMIHVY---NKIDLIDVEVLDRILDSIDKEGIFVSVKKDINIDKMIKCICDSI 367
Query: 439 LKATGRKNITMRVRSGGSEYQWLMKHTAVSNI--REDDTSAEHLLLDVVMTDVIMNKFK 495
K R + G + ++T++ N RED +LDV +++ NK+K
Sbjct: 368 FKDYVRCKFLIPYDKGHV-VSYFNENTSIINTEYREDGA-----ILDVECSNIEYNKYK 420
>gi|331695958|ref|YP_004332197.1| GTP-binding proten HflX [Pseudonocardia dioxanivorans CB1190]
gi|326950647|gb|AEA24344.1| GTP-binding proten HflX [Pseudonocardia dioxanivorans CB1190]
Length = 493
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 180/346 (52%), Gaps = 29/346 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G +V+D + D +F G G ++ L+ V+G T ++ L Q
Sbjct: 94 ARLAETAGSQVLDGLVQRRSRPDPATFIGSGKVDELRAAVQGAGADT--VIADGELSPGQ 151
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI- 234
+ L++ +V V DR +++ IF HA++R+ + Q+ +A+L YL R R +A + +
Sbjct: 152 LRQLEEKLKVKVIDRTALILDIFAQHARSRDGKAQVELAQLSYLLPRLRGWGEALSRQVG 211
Query: 235 ----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
TK LD +R + R KL++ + ++ RE R ++R + P
Sbjct: 212 GRAAGGVGIGGRGPGETKIELDRRR--IRHRMSKLRREIAAMRTVRETQRGSRRRNEVPG 269
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+VGYTN GK++L+ ALTD LV + LFATLD TT P+ DT+GF+ +
Sbjct: 270 VAIVGYTNAGKSSLLNALTDAGVLV-EDALFATLDPTTRRAETPDGRDYTLTDTVGFVRH 328
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVL 396
+P L+E F+ TLE+ AD+++HVVD S+P Q V + L + E + ++ +L
Sbjct: 329 LPHQLVEAFRSTLEETAQADLLVHVVDASDPLPEDQIAAVRKVLVEIGEEQQGRMPPELL 388
Query: 397 VVGNKVDAVPPGERVTEEYDL----LISATRGTGLAQLKEKVQDMI 438
VV NK+DA + + L +SA G G++ L+ ++ +++
Sbjct: 389 VV-NKIDAAGDLQLARLRHLLPDAVFVSAHTGAGVSLLRRRIAELL 433
>gi|193212441|ref|YP_001998394.1| GTP-binding proten HflX [Chlorobaculum parvum NCIB 8327]
gi|193085918|gb|ACF11194.1| GTP-binding proten HflX [Chlorobaculum parvum NCIB 8327]
Length = 450
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 187/371 (50%), Gaps = 33/371 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G VV + I D + G G E L V ++ +F D L Q
Sbjct: 46 AFLADTAGADVVSTIIQEKKQLDTATCIGSGKAEELAALVETESIDIVIFD--DDLTPVQ 103
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA-TNMNI 234
+ L+ + + V DR +++QIF AK+ +AR Q+ +A+L YL R + A T+++
Sbjct: 104 VRNLERILKCKVIDRTGLILQIFALRAKSAQARTQVELAQLEYLLPR---LSGAWTHLSK 160
Query: 235 TKGFLDSK----------RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGY 284
KG + +K R ++ R LKK L + Q + + R P VA+VGY
Sbjct: 161 QKGGIGTKGPGETQIETDRRLVRNRIASLKKKLRAVSLQHDT--QTRGRTTVPRVALVGY 218
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
TN GK+TL+ AL + N+LFATLD T L +L DT+GFI +P TL+
Sbjct: 219 TNAGKSTLMNALCPEAEAYAENRLFATLDTKTRRLELRINKLVLLSDTVGFIRKLPHTLV 278
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD- 403
E FK TL++ + AD ++HV+DVS+P + + Q V ETL+ + ++ +H++ V NK+D
Sbjct: 279 ESFKSTLDEVLQADFLLHVIDVSHPAFEEHMQVVRETLKEIGVKH---DHIIEVFNKIDA 335
Query: 404 ----AVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQ 459
AV G R + ISA RG L LKE + + + + ++ +VR+ S Y+
Sbjct: 336 LEDPAVLTGLRGKYPDAVFISAARGLNLTVLKETIANYVARDYKQR----KVRTHVSNYK 391
Query: 460 ---WLMKHTAV 467
+L H V
Sbjct: 392 LIGYLYDHAEV 402
>gi|363420351|ref|ZP_09308443.1| GTP-binding protein HflX [Rhodococcus pyridinivorans AK37]
gi|359735593|gb|EHK84550.1| GTP-binding protein HflX [Rhodococcus pyridinivorans AK37]
Length = 488
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 165/321 (51%), Gaps = 23/321 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G + L+ V T + L Q L+ + +V V DR +++ I
Sbjct: 114 DASTYIGSGKADELREIVLSTGADT--VICDGELTPAQLTALEKVVKVKVIDRTALILDI 171
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HA +RE + Q+++A++ Y+ R R ++ N G +++
Sbjct: 172 FAQHATSREGKAQVSLAQMEYMLPRLRGWGESMSRQAGGRAGSNGGVGLRGPGETKIETD 231
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R + ER KL++ + +K R+ R ++ R K P+VA+VGYTN GK++L+ LT L
Sbjct: 232 RRRIRERMAKLRREIKAMKAARDTKRTRRLRNKIPSVAIVGYTNAGKSSLLNKLTGSGVL 291
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V +N LFATLD TT LP+ + DT+GF+ ++PT L+E F+ TLE+ AD+++H
Sbjct: 292 V-QNALFATLDPTTRRSALPDGREYVLTDTVGFVRHLPTQLVEAFRSTLEEVADADVLLH 350
Query: 363 VVDVSNPDYLQQKQHVDETLQH-LELEEKILEHVLVVGNKVDAVPPGE----RVTEEYDL 417
VVD S+P +Q + V E + L + L+V NK+DA P R +
Sbjct: 351 VVDGSDPMPTEQIKAVREVVTEVLRESDAPPPPELIVVNKIDAADPVTLTQLRSAIPGAV 410
Query: 418 LISATRGTGLAQLKEKVQDMI 438
+SA G G+ +L+ ++ ++
Sbjct: 411 FVSAHTGVGVEELQTQLAGLL 431
>gi|341615350|ref|ZP_08702219.1| GTPase [Citromicrobium sp. JLT1363]
Length = 438
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 192/385 (49%), Gaps = 37/385 (9%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVT-AVFVSVD 169
LAE+ L ++I G V +S + + + FG G +E ++ DA + A + VD
Sbjct: 27 LAEAIGLANAI-GIVVAESYVQPVRDVRPATLFGAGQVE----KIGTDAELAEAELIIVD 81
Query: 170 -VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIED 228
L QQ+ L++ + V DR ++++IF A T E RLQ+ +A L Y +R +
Sbjct: 82 GALSAIQQRTLEEQLKRKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQASRL--VRS 139
Query: 229 ATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
T++ +G +++ R ++ R +L+K L +++ R + R ++ R +P
Sbjct: 140 WTHLERQRGGYGFLGGPGETQIEADRRMIRTRMSRLRKELEQVRKTRALHRERRTRAPWP 199
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+A+VGYTN GK+T+ LT D + + LFATLD T LP + + DT+GFIS
Sbjct: 200 VIALVGYTNAGKSTIFNRLTGADVMA-EDLLFATLDPTMRAIGLPGVEKAILSDTVGFIS 258
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLEL--------EE 389
++PT L+ F+ TLE+ AD+I+HV D++NP QK V + L+ L + EE
Sbjct: 259 DLPTQLVAAFRATLEEVTNADLILHVRDIANPSSAAQKTQVLDVLRGLGVVGAPEEGAEE 318
Query: 390 KILEHVLVVGNKVDAVPPGERV-------TEEYDLLISATRGTGLAQLKEKVQDMILKAT 442
+ +L V NK D +P R +E + +SA G L L+ ++ ++ +
Sbjct: 319 ASVIPILEVWNKWDLLPDDMRTDLAARAEDDEGVVPLSAETGFNLEALEARIAQVLTRGA 378
Query: 443 GRKNITMRVRSGGSEYQWLMKHTAV 467
+ + S G E WL H V
Sbjct: 379 SLREFVLPT-SAGREIAWLHAHGDV 402
>gi|239917258|ref|YP_002956816.1| GTP-binding protein [Micrococcus luteus NCTC 2665]
gi|281414264|ref|ZP_06246006.1| hypothetical protein MlutN2_03508 [Micrococcus luteus NCTC 2665]
gi|239838465|gb|ACS30262.1| small GTP-binding protein domain/GTP-binding conserved hypothetical
protein TIGR00650 [Micrococcus luteus NCTC 2665]
Length = 546
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 177/347 (51%), Gaps = 31/347 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D I + D +F GKG + L V A A V VD L
Sbjct: 148 AALAETAGSEVLDGVIQRRATPDPATFLGKGKAQELAEIV---ALSGADTVVVDSELAPS 204
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HA +RE R Q+ +A+L YL R R ++ +
Sbjct: 205 QRRALEDVVRVKVIDRTALILDIFAQHASSREGRAQVELAQLEYLLPRLRGWGESMSRQA 264
Query: 235 -----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
TK LD +R + R KL++ + +K RE R ++R + P
Sbjct: 265 GGRAAAGEGIGSRGPGETKIELDRRR--IRTRMAKLRRDIAGMKPAREAKRANRRRNRVP 322
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+VA+ GYTN GK++L+ LT LV N LFATLD T M P+ + DT+GF+
Sbjct: 323 SVAIAGYTNAGKSSLLNRLTHAGVLV-ENALFATLDPTVRRAMTPDGIGYTLSDTVGFVR 381
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
N+PT L+E F+ TLE+ AD+I+HVVD S+PD Q V ++ +I E ++
Sbjct: 382 NLPTQLVEAFRSTLEEVADADVILHVVDGSHPDPEGQIAAVRSVFAEVDA-HRIPE--II 438
Query: 398 VGNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
V NK DA P R E + +++SA G G+ +L+ + I +
Sbjct: 439 VLNKADAADPAVVARIRSKEPHAVVVSARTGEGIDELERAIAATIPR 485
>gi|429728781|ref|ZP_19263485.1| GTP-binding protein HflX [Peptostreptococcus anaerobius VPI 4330]
gi|429147756|gb|EKX90778.1| GTP-binding protein HflX [Peptostreptococcus anaerobius VPI 4330]
Length = 437
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 172/336 (51%), Gaps = 22/336 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
+AE K LV + G V I + D ++ G G +E +K + ++ + V D
Sbjct: 41 MAELKELVKA-AGAEFVGELIQNKDKVDTATYLGSGKIEEIK--IYAESLDATMIVFNDE 97
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY------- 223
L Q + ++D+ + DR +++ IF A +RE +LQ+ +A+L Y R
Sbjct: 98 LSGAQIRNIEDIIGKKIIDRTTLILDIFAQRALSREGKLQVELAQLKYRLPRLYGMGGQM 157
Query: 224 -RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
RT + L+ + ++ R ++K L ++ RE+ R+++Q+ K P VA+V
Sbjct: 158 SRTGAGIGTRGPGEQKLEKDKRHILNRAAAIRKELKEVVKHREIQRSQRQKNKIPIVALV 217
Query: 283 GYTNCGKTTLIKALTD-------DDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGF 335
GYTN GK+TL+ L + + ++ LFATLDVT +LPN+ L VDT+GF
Sbjct: 218 GYTNAGKSTLLNELIKTHPDYEAEKGVFVKDMLFATLDVTLRRALLPNKREFLLVDTVGF 277
Query: 336 ISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV 395
+S +P L+E FK TLE+ AD+I+HV+D +N QK D L+ L +EK
Sbjct: 278 VSKLPHDLIEAFKSTLEEVNYADLILHVIDATNESSDIQKHTTDSVLKDLGADEK---AT 334
Query: 396 LVVGNKVDAVPPGERVTEEYDLL-ISATRGTGLAQL 430
+ V NK+D + + DL+ +SA +G L +L
Sbjct: 335 ITVYNKIDRLNLDIYPKSQEDLVYVSAKQGINLDKL 370
>gi|289422706|ref|ZP_06424546.1| GTP-binding protein HflX [Peptostreptococcus anaerobius 653-L]
gi|289156885|gb|EFD05510.1| GTP-binding protein HflX [Peptostreptococcus anaerobius 653-L]
Length = 436
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 172/336 (51%), Gaps = 22/336 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
+AE K LV + G V I + D ++ G G +E +K + ++ + V D
Sbjct: 40 MAELKELVKA-AGAEFVGELIQNKDKVDTATYLGSGKIEEIK--IYAESLDATMIVFNDE 96
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY------- 223
L Q + ++D+ + DR +++ IF A +RE +LQ+ +A+L Y R
Sbjct: 97 LSGAQIRNIEDIIGKKIIDRTTLILDIFAQRALSREGKLQVELAQLKYRLPRLYGMGGQM 156
Query: 224 -RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
RT + L+ + ++ R ++K L ++ RE+ R+++Q+ K P VA+V
Sbjct: 157 SRTGAGIGTRGPGEQKLEKDKRHILNRAAAIRKELKEVVKHREIQRSQRQKNKIPIVALV 216
Query: 283 GYTNCGKTTLIKALTD-------DDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGF 335
GYTN GK+TL+ L + + ++ LFATLDVT +LPN+ L VDT+GF
Sbjct: 217 GYTNAGKSTLLNELIKTHPDYEAEKGVFVKDMLFATLDVTLRRALLPNKREFLLVDTVGF 276
Query: 336 ISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV 395
+S +P L+E FK TLE+ AD+I+HV+D +N QK D L+ L +EK
Sbjct: 277 VSKLPHDLIEAFKSTLEEVNYADLILHVIDATNESSDIQKHTTDSVLKDLGADEK---AT 333
Query: 396 LVVGNKVDAVPPGERVTEEYDLL-ISATRGTGLAQL 430
+ V NK+D + + DL+ +SA +G L +L
Sbjct: 334 ITVYNKIDRLNLDIYPKSQEDLVYVSAKQGINLDKL 369
>gi|27379603|ref|NP_771132.1| GTP-binding protein HflX [Bradyrhizobium japonicum USDA 110]
gi|27352755|dbj|BAC49757.1| GTP-binding protein HFLX [Bradyrhizobium japonicum USDA 110]
Length = 437
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 190/385 (49%), Gaps = 46/385 (11%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDV--------LKLHQQKMLQDLFQVPVFDRYM 192
++ GKG +E + A+ S+DV L QQ+ L+ V DR
Sbjct: 60 TYIGKGKVE----------EIAALAKSLDVELVVMDCALAPIQQRNLEKELHAKVLDRTG 109
Query: 193 IVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDS 241
++++IF AKT+E LQ+ +A L Y R R + T++ +G +++
Sbjct: 110 LILEIFGRRAKTKEGSLQVELAHLNY--QRSRLVRSWTHLERQRGGFGFMGGPGETQIEA 167
Query: 242 KRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDS 301
R ++ ER KL+ L K++ R + R +QR + VA+VGYTN GK+TL LT D
Sbjct: 168 DRRLIQERISKLEGELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRAD- 226
Query: 302 LVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIII 361
+ + LFATLD T LP+ + + DT+GFISN+PT L+ F+ TLE+ + AD+I+
Sbjct: 227 VQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQLIAAFRATLEEVLEADVIL 286
Query: 362 HVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP----------PGERV 411
HV D+S+ D Q+ VD L+ L + ++ V NK+D R
Sbjct: 287 HVRDISHEDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKIDRYDAEQREELLNIAARRP 346
Query: 412 TEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG-GSEYQWLMKHTAVSNI 470
+ +L+SA G G+ L +++ + A R + + + +G G+ WL +++ V
Sbjct: 347 EDHPAMLVSAVSGEGVDALLAAIEERL--AAKRTTLDLSIDAGDGAGISWLHRNSEVLTK 404
Query: 471 REDDTSAEHLL-LDVVMTDVIMNKF 494
D + + +D D+++N+F
Sbjct: 405 ELHDGRFDMTVRVDETKRDIVVNRF 429
>gi|254975808|ref|ZP_05272280.1| putative GTP-binding protein [Clostridium difficile QCD-66c26]
gi|255093195|ref|ZP_05322673.1| putative GTP-binding protein [Clostridium difficile CIP 107932]
gi|255314937|ref|ZP_05356520.1| putative GTP-binding protein [Clostridium difficile QCD-76w55]
gi|255517611|ref|ZP_05385287.1| putative GTP-binding protein [Clostridium difficile QCD-97b34]
gi|255650722|ref|ZP_05397624.1| putative GTP-binding protein [Clostridium difficile QCD-37x79]
gi|306520638|ref|ZP_07406985.1| putative GTP-binding protein [Clostridium difficile QCD-32g58]
gi|384361440|ref|YP_006199292.1| GTP-binding protein [Clostridium difficile BI1]
Length = 423
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 206/419 (49%), Gaps = 41/419 (9%)
Query: 104 NTTRDF--MLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARV 161
N + DF ++ E + L S+ VV S + ++ + G G +E + ++ +
Sbjct: 14 NKSEDFNELMIELENLCSACD-IDVVGSITQNAKQVNRAFYIGTGKVEEILNLIKKENIE 72
Query: 162 TAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWT 221
+F + L Q K L++ + DR +++ IF AKTREA+LQ+ +A L Y+
Sbjct: 73 IVIFY--NELSTSQLKNLEEKLNCEIIDRTALILDIFAQRAKTREAKLQVEVASLKYMLP 130
Query: 222 RYRTIEDATNMNITKGFLDSK------------RMVLMEREQKLKKALNKLKGQREMMRN 269
R I N+ G + +K R + E+ L + L LK QRE R+
Sbjct: 131 RL--IGSNENLGRQSGGVGTKNRGSGEKKLELDRRRIEEKITSLNRELYDLKFQRETQRS 188
Query: 270 KKQRQKFPTVAVVGYTNCGKTTLIKALTD------DDSLVPRNQLFATLDVTTHEGMLPN 323
+++ P VA+VGYTN GK++++ L D + + +N LFATL+ + +L N
Sbjct: 189 MRRKSNLPNVALVGYTNAGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLAN 248
Query: 324 RLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQ 383
L DT+GF+SN+P L++ F+ TLE+A AD+++HV+D+SNP Y + ++TL+
Sbjct: 249 NKEFLLSDTVGFVSNLPHDLVKAFRSTLEEACEADVLLHVIDISNPSYKSHIKVTEDTLK 308
Query: 384 HLELEEKILEHVLVVGNKVDA--VPPGERVTEEYD---LLISATRGTGLAQLKEKVQDMI 438
+ + + HV NK+D V +R+ + D + +S + + ++ + + D I
Sbjct: 309 QIGADGIPMIHVY---NKIDLIDVEVLDRILDSIDKEGIFVSVKKDINIDKMIKCICDSI 365
Query: 439 LKATGRKNITMRVRSGGSEYQWLMKHTAVSNI--REDDTSAEHLLLDVVMTDVIMNKFK 495
K R + G + ++T++ N RED +LDV +++ NK+K
Sbjct: 366 FKDCVRCKFLIPYDKGHV-VSYFNENTSIINTEYREDGA-----ILDVECSNIEYNKYK 418
>gi|383762918|ref|YP_005441900.1| GTP-binding protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381383186|dbj|BAM00003.1| GTP-binding protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 475
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 182/352 (51%), Gaps = 36/352 (10%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
AL++ G RVV L + + + G G LE L+ V A + A V D L
Sbjct: 64 ALLAKTAGVRVVGRLTQRLAAPNPATLIGVGKLEELRAAV---AELGANMVIFDEELSPR 120
Query: 175 QQKMLQDLF--QVPVFDRYMIVIQIFKAHAKTREARLQIAIAE----LPYL---WTRYRT 225
QQ+ L+ ++ V DR +++ IF HA+TRE +Q+ +A+ LP L WT
Sbjct: 121 QQRELEKALGEEIKVIDRTALILDIFARHARTREGAVQVELAQYEYRLPRLTRAWTHLAR 180
Query: 226 IEDATNMNITKGF---------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
T G L+ R + R LK+ L +++ RE R+++++
Sbjct: 181 QAGGRAGGATGGVGVRGPGETQLEVDRREINRRIAFLKQELAEIRKHREQYRSQRRQSAL 240
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P +A+VGYTN GK+TL+ A+ D D +V +QLFATLD TT LP+ +L+ DT+GFI
Sbjct: 241 PLIALVGYTNAGKSTLLNAIADAD-VVAEDQLFATLDPTTRRVRLPSDRLVLFSDTVGFI 299
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
+P TL+ F+ TLE+ AD+++HVVD+S+P+ +Q V+E L+ L +K ++
Sbjct: 300 QKLPLTLVAAFRSTLEEVNEADLLVHVVDISHPNMEEQIAAVEEILEDLGAADK---PIV 356
Query: 397 VVGNKVDAVPP-----GERVTEEY-----DLLISATRGTGLAQLKEKVQDMI 438
+ NK+D + P R+ + + ISA G GL +L + + D +
Sbjct: 357 MALNKIDRLDPSNPEHARRIEQALADNPNAVPISALNGQGLDRLLQAIDDAL 408
>gi|315646583|ref|ZP_07899701.1| GTP-binding proten HflX [Paenibacillus vortex V453]
gi|315278226|gb|EFU41546.1| GTP-binding proten HflX [Paenibacillus vortex V453]
Length = 429
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 172/327 (52%), Gaps = 25/327 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F GKG +E L+ + G TA+F L Q + L++ V + DR +++ I
Sbjct: 63 DSKWFIGKGKVEELRMAIDGLGATTAIFDQE--LSGAQVRNLEESLDVKIIDRTQLILDI 120
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN------ITKGFLDSK----RMVLM 247
F AKTRE +Q+ +A+L YL R N++ T+G +SK R +
Sbjct: 121 FAQRAKTREGIVQVELAQLTYLLPRLSG--HGKNLSRLGAGIGTRGPGESKLETDRRHIR 178
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
+R LK+ L+++ R + R ++++ VA+VGYTN GK+TL+ LT D + +Q
Sbjct: 179 DRISDLKRQLDEMTRHRSLHRERRKKSGAVQVALVGYTNAGKSTLLNRLTAADVYI-EDQ 237
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T+ LP+ ++ DT+GFI N+P L+ F+ TLE+A AD+I+HVVD S
Sbjct: 238 LFATLDPTSRALELPSGKEVVLTDTVGFIQNLPHDLVAAFRATLEEANEADLILHVVDSS 297
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE---RVTEEYDLLISATRG 424
+P +Q V LQ L +K +V+ NK DA P + T E L ISA
Sbjct: 298 SPMRDEQMAVVHSILQDLGAADK---PQIVLFNKKDACEPEQLEMLPTGEGQLKISAYND 354
Query: 425 TGLAQLKEKVQDMILKATGRKNITMRV 451
L ++E +Q+ + N+T R+
Sbjct: 355 QDLDTVREAIQNQLSGG----NVTFRI 377
>gi|374854026|dbj|BAL56919.1| small GTP-binding protein [uncultured prokaryote]
Length = 441
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/350 (32%), Positives = 183/350 (52%), Gaps = 30/350 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G VV + L ++ G G +E +K VR +F D L Q
Sbjct: 31 AQLARTAGVEVVGRAVQRLRRIHPATYIGPGKVEEIKALVRAMHANMVIFD--DELSPSQ 88
Query: 176 QKMLQDLF--QVPVFDRYMIVIQIFKAHAKTREARLQIAIAE----LPYLWTRYRTIEDA 229
Q+ L++ F +V V DR +++ IF HA TRE LQ+ +A+ LP L R++ +
Sbjct: 89 QRNLENAFGDEVRVLDRTALILDIFAQHAHTREGALQVELAQYEYRLPRLTRRWQNLAQQ 148
Query: 230 TNMNITKGF-------------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
+ +G L+ R + +R LK+ L +++ R+ R +++R +
Sbjct: 149 AGGSFGRGGISGVGLRGPGEKQLEIDRRRIKDRIAHLKRELEEVRAHRQRYRERRRRAQV 208
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P VA+VGYTN GK+TL+ A++ LV +QLFATLD TT LP L+ DT+GFI
Sbjct: 209 PVVALVGYTNAGKSTLLNAVSGASVLV-ADQLFATLDPTTRRVKLPEGGVALFTDTVGFI 267
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
+P L+ F+ TLE+ AD+IIHV+D+++P+ LQQ + V +TL+ + + + + L
Sbjct: 268 QKLPHPLVAAFRATLEEINEADLIIHVLDITHPNALQQARVVIQTLREIGVHDIPMITAL 327
Query: 397 VVGNKVDAVPPGER----VTEEYDLL-ISATRGTGLAQLKEKVQDMILKA 441
NK+D +P E E D + ISA G GL L KV+ ++ ++
Sbjct: 328 ---NKIDRLPDPEAARALAAEHPDFVAISAAYGIGLEDLLRKVEAILYRS 374
>gi|194336789|ref|YP_002018583.1| GTP-binding proten HflX [Pelodictyon phaeoclathratiforme BU-1]
gi|194309266|gb|ACF43966.1| GTP-binding proten HflX [Pelodictyon phaeoclathratiforme BU-1]
Length = 434
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 196/381 (51%), Gaps = 31/381 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+S I D GKG +E L V+ +F D L Q
Sbjct: 37 AFLADTAGADTVESFIQDKKLRDPAYCIGKGKVEELVLFVKEKEIDLVIFD--DDLSPAQ 94
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNIT 235
+ L+ + V DR +++QIF A++ +A++Q+ +A+L Y+ R T+++
Sbjct: 95 ARNLEKSLECKVIDRTGLILQIFAIRAQSAQAKMQVELAQLEYMLPRLSG--QWTHLSKQ 152
Query: 236 KGFLDSK----------RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYT 285
KG + +K R ++ R LKK L ++ Q + + RQ P V++VGYT
Sbjct: 153 KGGIGNKGPGETQIETDRRLVRNRIALLKKKLREVSLQHDT--QTRGRQTVPRVSLVGYT 210
Query: 286 NCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLE 345
N GK+TL+ AL + N+LFATLD T L +L DT+GFI +P TL+E
Sbjct: 211 NAGKSTLMNALCPEAEAFAENRLFATLDTKTRRLELNINKLVLLSDTVGFIRKLPHTLVE 270
Query: 346 PFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV 405
FK TL++ + AD ++HV+D+S+P + Q Q V +TL+ + + ++++ V NK+DA+
Sbjct: 271 SFKSTLDEVLQADFLLHVIDISHPGFEDQMQIVRDTLKEIGVGH---DNIIDVFNKIDAL 327
Query: 406 --PPGER-VTEEYD--LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQ- 459
P R ++E+Y + ISA RG L+ LKE + + + + I++ V S Y+
Sbjct: 328 EDPSILRTMSEKYPDAVFISARRGLNLSLLKEMIGQQVARDYSERKISVHV----SNYKL 383
Query: 460 --WLMKHTAVSNIREDDTSAE 478
WL +HT V + R D E
Sbjct: 384 ITWLYEHTEVIDKRHVDEEVE 404
>gi|269795601|ref|YP_003315056.1| GTP-binding proten HflX [Sanguibacter keddieii DSM 10542]
gi|269097786|gb|ACZ22222.1| GTP-binding proten HflX [Sanguibacter keddieii DSM 10542]
Length = 515
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 175/357 (49%), Gaps = 35/357 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G +V+D + + D ++ G G L V A A V VD L
Sbjct: 119 AALAETAGSQVLDGLLQRRQTPDPGTYLGSGKAAELAAVV---ASTGADTVIVDGDLAPS 175
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 176 QRRALEDIIKVKVVDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQA 235
Query: 235 ------------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
TK LD +R + R KL++ + + RE R+ ++R
Sbjct: 236 GGQVGGAGAGMGSRGPGETKIELDRRR--IRNRMAKLRREIAAMAPSRETKRSSRKRNAI 293
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P+VA+ GYTN GK++L+ ALT LV N LFATLD T P+ DT+GF+
Sbjct: 294 PSVAIAGYTNAGKSSLLNALTGAGVLV-ENALFATLDPTVRRTKTPDGRVYTLADTVGFV 352
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++P L+E F+ TLE+ +D+++HVVD S+PD Q V L+ + + E +
Sbjct: 353 RSLPHQLVEAFRSTLEEVADSDLLLHVVDASHPDPEGQIAAVRHVLEGIPGALDVPE--V 410
Query: 397 VVGNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITM 449
+V NK D P R E L++SA G G+ +L D+I A +T+
Sbjct: 411 IVLNKADLADPDTIARLRSRERTTLVVSAHTGEGITEL----LDLISGALPHPGVTV 463
>gi|384439278|ref|YP_005654002.1| HSR1-like GTP-binding protein [Thermus sp. CCB_US3_UF1]
gi|359290411|gb|AEV15928.1| GTP-binding protein, HSR1-related protein [Thermus sp. CCB_US3_UF1]
Length = 549
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 161/324 (49%), Gaps = 32/324 (9%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
+ D + G G LE LK + T +F ++ L Q + ++ + V DR +++
Sbjct: 229 ALDPRYLVGLGKLEELKSLAYHENASTLIF-GLE-LSPAQAREIEKATGLKVLDRTQLIL 286
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLM 247
IF HAKT EA+ Q+ +A+L YL R R + L+ R L+
Sbjct: 287 DIFALHAKTPEAQAQVELAQLRYLLPRLVGKGKELSRLGGGIGTRGPGETKLEVDRRRLL 346
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
R L + L + +RE R +++R+ P VAVVGYTN GKTTL++AL ++
Sbjct: 347 ARVAHLSRKLEEYAKRREEARRQRKRRGVPLVAVVGYTNAGKTTLLQALARGGE-PGEDK 405
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATL T G LP +L+ DT+GFI +P LL F+ TLE+ AD+++HV+D S
Sbjct: 406 LFATLRPLTRRGFLPGVGEVLFTDTVGFIRRMPEELLTAFRATLEEVREADLLVHVLDAS 465
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLL--------- 418
L + Q V+ L+ L +E VL + A P YDLL
Sbjct: 466 EEGALGRHQVVEGLLRELGVEAP---RVLALAKADRAAP--------YDLLYLRERLGGV 514
Query: 419 -ISATRGTGLAQLKEKVQDMILKA 441
+SA +GTGLA+LKE + +L+A
Sbjct: 515 PVSALKGTGLAELKEALAQALLQA 538
>gi|423088531|ref|ZP_17076910.1| GTP-binding protein HflX [Clostridium difficile 70-100-2010]
gi|357559417|gb|EHJ40865.1| GTP-binding protein HflX [Clostridium difficile 70-100-2010]
Length = 425
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 207/419 (49%), Gaps = 41/419 (9%)
Query: 104 NTTRDF--MLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARV 161
N + DF ++ E + L S+ VV S + ++ + G G +E + ++ +
Sbjct: 16 NKSEDFNELMIELENLCSACD-IDVVGSITQNAKQVNRAFYIGTGKVEEILNLIKKENIE 74
Query: 162 TAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWT 221
+F + L Q K L++ + DR +++ IF AKTREA+LQ+ +A L Y+
Sbjct: 75 IVIFY--NELSTSQLKNLEEKLNCEIIDRTALILDIFAQRAKTREAKLQVELASLKYMLP 132
Query: 222 RYRTIEDATNMNITKGFLDSK------------RMVLMEREQKLKKALNKLKGQREMMRN 269
R I N+ G + +K R + E+ L + L+ LK QRE R+
Sbjct: 133 RL--IGSNENLGRQSGGVGTKNRGSGEKKLELDRRRIEEKITSLNRELDDLKFQRETQRS 190
Query: 270 KKQRQKFPTVAVVGYTNCGKTTLIKALTD------DDSLVPRNQLFATLDVTTHEGMLPN 323
+++ P VA+VGYTN GK++++ L D + + +N LFATL+ + +L N
Sbjct: 191 MRRKSNLPNVALVGYTNAGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLAN 250
Query: 324 RLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQ 383
L DT+GF+SN+P L++ F+ TLE+A AD+++HV+D+SNP Y + ++TL+
Sbjct: 251 NKEFLLSDTVGFVSNLPHDLVKAFRSTLEEACEADVLLHVIDISNPSYKSHIKVTEDTLK 310
Query: 384 HLELEEKILEHVLVVGNKVDA--VPPGERVTEEYD---LLISATRGTGLAQLKEKVQDMI 438
+ + + HV NK+D V +R+ + D + +S + + ++ + + D I
Sbjct: 311 QIGADGIPMIHVY---NKIDLIDVEVLDRILDSIDKEGIFVSVKKDINIDKMIKCICDSI 367
Query: 439 LKATGRKNITMRVRSGGSEYQWLMKHTAVSN--IREDDTSAEHLLLDVVMTDVIMNKFK 495
K R + G + ++T++ N RED +LDV +++ NK+K
Sbjct: 368 FKDYVRYKFLIPYDKGHV-VSYFNENTSIINTEYREDGA-----ILDVECSNIEYNKYK 420
>gi|269956055|ref|YP_003325844.1| GTP-binding proten HflX [Xylanimonas cellulosilytica DSM 15894]
gi|269304736|gb|ACZ30286.1| GTP-binding proten HflX [Xylanimonas cellulosilytica DSM 15894]
Length = 515
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 171/344 (49%), Gaps = 31/344 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D + D ++ G G L VR V A V D L
Sbjct: 121 AALAETAGSEVLDGLLQRRQKPDPGTYLGSGKAAELAELVRD---VGADTVVADTELAPS 177
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R D+ +
Sbjct: 178 QRRALEDIVKVKVIDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGDSMSRQA 237
Query: 235 ------------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
TK LD +R + R KL++ + ++ R R +++R
Sbjct: 238 GGQVGGQGAGMGSRGPGETKIELDRRR--IRNRMAKLRREIKEMAPARATKRVERKRHAI 295
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P VA+ GYTN GK++L+ ALTD LV N LFATLD T + DT+GF+
Sbjct: 296 PNVAIAGYTNAGKSSLLNALTDAGVLV-ENALFATLDPTVRRATTDDGRVYTLADTVGFV 354
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++P L+E F+ TLE+ A +++HVVD S+PD Q V E L + + + E +
Sbjct: 355 RHLPHQLVEAFRSTLEEVGDAALLLHVVDASHPDPEGQIAAVREVLAEIPGIDAVRE--V 412
Query: 397 VVGNKVDAVPPG--ERVT--EEYDLLISATRGTGLAQLKEKVQD 436
VV NK D P R+ E+ +++SA G G+A+L+ + D
Sbjct: 413 VVLNKADVADPEVIGRIQRREKRTVVVSAHTGEGIAELRHLIAD 456
>gi|260683809|ref|YP_003215094.1| GTP-binding protein [Clostridium difficile CD196]
gi|260687469|ref|YP_003218603.1| GTP-binding protein [Clostridium difficile R20291]
gi|260209972|emb|CBA63976.1| putative GTP-binding protein [Clostridium difficile CD196]
gi|260213486|emb|CBE05186.1| putative GTP-binding protein [Clostridium difficile R20291]
Length = 425
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 206/419 (49%), Gaps = 41/419 (9%)
Query: 104 NTTRDF--MLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARV 161
N + DF ++ E + L S+ VV S + ++ + G G +E + ++ +
Sbjct: 16 NKSEDFNELMIELENLCSACD-IDVVGSITQNAKQVNRAFYIGTGKVEEILNLIKKENIE 74
Query: 162 TAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWT 221
+F + L Q K L++ + DR +++ IF AKTREA+LQ+ +A L Y+
Sbjct: 75 IVIFY--NELSTSQLKNLEEKLNCEIIDRTALILDIFAQRAKTREAKLQVEVASLKYMLP 132
Query: 222 RYRTIEDATNMNITKGFLDSK------------RMVLMEREQKLKKALNKLKGQREMMRN 269
R I N+ G + +K R + E+ L + L LK QRE R+
Sbjct: 133 RL--IGSNENLGRQSGGVGTKNRGSGEKKLELDRRRIEEKITSLNRELYDLKFQRETQRS 190
Query: 270 KKQRQKFPTVAVVGYTNCGKTTLIKALTD------DDSLVPRNQLFATLDVTTHEGMLPN 323
+++ P VA+VGYTN GK++++ L D + + +N LFATL+ + +L N
Sbjct: 191 MRRKSNLPNVALVGYTNAGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLAN 250
Query: 324 RLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQ 383
L DT+GF+SN+P L++ F+ TLE+A AD+++HV+D+SNP Y + ++TL+
Sbjct: 251 NKEFLLSDTVGFVSNLPHDLVKAFRSTLEEACEADVLLHVIDISNPSYKSHIKVTEDTLK 310
Query: 384 HLELEEKILEHVLVVGNKVDA--VPPGERVTEEYD---LLISATRGTGLAQLKEKVQDMI 438
+ + + HV NK+D V +R+ + D + +S + + ++ + + D I
Sbjct: 311 QIGADGIPMIHVY---NKIDLIDVEVLDRILDSIDKEGIFVSVKKDINIDKMIKCICDSI 367
Query: 439 LKATGRKNITMRVRSGGSEYQWLMKHTAVSNI--REDDTSAEHLLLDVVMTDVIMNKFK 495
K R + G + ++T++ N RED +LDV +++ NK+K
Sbjct: 368 FKDCVRCKFLIPY-DKGHVVSYFNENTSIINTEYREDGA-----ILDVECSNIEYNKYK 420
>gi|319408442|emb|CBI82097.1| GTP-binding protein HflX [Bartonella schoenbuchensis R1]
Length = 453
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 184/359 (51%), Gaps = 27/359 (7%)
Query: 93 PFIKWGK--KMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLEL 150
PF K K+ + D + E+ L +I+ +V I++ + + FG G ++
Sbjct: 26 PFFPVNKNEKVLSEHSIDSRIKEALGLARAIE-LDIVHYETINISTPHPSTLFGVGKVDA 84
Query: 151 LKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQ 210
+ A+ + VL QQ+ L+ L+ V DR ++++IF A+T+E +LQ
Sbjct: 85 FADYI--SEHHIALAIIDHVLTPVQQRNLEKLWSCKVIDRTALILEIFGRRARTKEGKLQ 142
Query: 211 IAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNK 259
+ +A L Y + R + T++ +G +++ R +L ++ ++++ L
Sbjct: 143 VELAHLSY--QKSRLVRSWTHLERQRGGSGFLGGPGETQIETDRRLLQDKITRIRRELEN 200
Query: 260 LKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEG 319
+ R + R K+++ P VA+VGYTN GK+TL L+D L ++ LFATLD T +
Sbjct: 201 VVKTRALHRAKRKKTSHPVVALVGYTNAGKSTLFNRLSDAGVLT-KDMLFATLDPTLRKV 259
Query: 320 MLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVD 379
+LP+ I DT+GFISN+PT L+ F+ TLE+ + AD+IIHV D+S+PD+ Q Q V
Sbjct: 260 ILPHGQTIFLSDTVGFISNLPTHLIAAFRATLEEVIEADLIIHVKDISDPDHRAQAQDVL 319
Query: 380 ETLQHLELEEKILEHVLVVGNKVD--------AVPPGERVTEEYDLLISATRGTGLAQL 430
E L L ++ + ++ V NK D + R L+ISA G GL QL
Sbjct: 320 EILSSLGVDIGNTDRIVEVWNKADMLDEHTLNVLQTSARTLLNPALMISALTGEGLNQL 378
>gi|255078380|ref|XP_002502770.1| predicted protein [Micromonas sp. RCC299]
gi|226518036|gb|ACO64028.1| predicted protein [Micromonas sp. RCC299]
Length = 447
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 185/351 (52%), Gaps = 28/351 (7%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
LAE L S G VV + + ++ GKG L L+R +R D V V ++
Sbjct: 5 LAELAELAQS-AGLEVVATLTQRMKHPHSGTYVGKGKLRELRR-LR-DPTVDTVIFDTEL 61
Query: 171 LKLHQQKMLQDL-FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWTR 222
+ + Q L +V V DR M+++ IF A+T E +LQ+ +A+L Y +WT
Sbjct: 62 TPRQNRNIEQYLDGKVRVCDRTMLILDIFSQRARTAEGQLQVEMAQLEYQLPRLSRMWTH 121
Query: 223 Y-RTIEDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
RT KG ++ + +L +R Q LKK L+K+K R + R++++ P
Sbjct: 122 LDRTAGGGGAGGQVKGMGEKQIEIDKRLLRDRIQFLKKKLDKVKTHRMLYRDRRKETPVP 181
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
V++VGYTN GK++L+ ALT D + +QLFATLD TT LPN +L DT+GFI
Sbjct: 182 VVSLVGYTNAGKSSLLNALTAAD-VYAEDQLFATLDPTTRRFPLPNGKDVLVTDTVGFIQ 240
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
N+PT L+ F+ TLE+ + + +++HVVD+S+P Q VD L+ EL + V
Sbjct: 241 NLPTELVAAFRATLEEIVDSTMLVHVVDISSPLAGAQVAAVDTVLK--ELGASDIPRV-T 297
Query: 398 VGNKVDA-VPPG---ERVTEEY----DLLISATRGTGLAQLKEKVQDMILK 440
V NK DA + G E + EE ++ SAT G G+ L +QD +++
Sbjct: 298 VWNKSDASIASGKDPEALAEEARSRGAVVTSATTGFGIDSLVHALQDTLVR 348
>gi|54025798|ref|YP_120040.1| GTP-binding protein [Nocardia farcinica IFM 10152]
gi|54017306|dbj|BAD58676.1| putative GTP-binding protein [Nocardia farcinica IFM 10152]
Length = 548
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 169/323 (52%), Gaps = 27/323 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G + L+ V T + L Q L+ + +V V DR +++ I
Sbjct: 161 DPATYIGSGKADELRAVVLETGADT--VICDGELTPAQLTALEKVVKVKVIDRTALILDI 218
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HA + E + Q+++A++ Y+ R R ++ N G +++
Sbjct: 219 FAQHATSSEGKAQVSLAQMEYMLPRLRGWGESMSRQAGGRAGSNGGVGLRGPGETKIETD 278
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R + ER KL++ + ++K RE R ++ P VA+VGYTN GK++L+ ALT L
Sbjct: 279 RRRIRERMAKLRREIREMKTARETKRARRASSGIPQVAIVGYTNAGKSSLMNALTGSGVL 338
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V ++ LFATLD TT L + +++ DT+GF+ ++PT L+E F+ TLE+ AD+++H
Sbjct: 339 V-QDALFATLDPTTRRAELDDGREVVFTDTVGFVRHLPTQLVEAFRSTLEEVTGADLLLH 397
Query: 363 VVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVVGNKVDAVPPGERVTEEYDLL-- 418
VVD S+PD Q + V E + + E +LVV NK+DA+ P R TE LL
Sbjct: 398 VVDGSDPDPAGQIKAVREVIADVIKESGAAAPPELLVV-NKIDAISPMRR-TELRGLLPD 455
Query: 419 ---ISATRGTGLAQLKEKVQDMI 438
+SA G G+ L+ ++ +++
Sbjct: 456 AEFVSAHTGAGVDGLRARLNEVL 478
>gi|433655176|ref|YP_007298884.1| GTP-binding protein HflX [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293365|gb|AGB19187.1| GTP-binding protein HflX [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 412
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 176/323 (54%), Gaps = 19/323 (5%)
Query: 118 VSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQK 177
+++ G VV S + D+ S+ GKG L LK+ V D + ++ D L Q K
Sbjct: 33 LANTAGAEVVGIMTQSRSNVDRTSYIGKGKLIELKQFV--DNMDIDLVIANDELSGSQIK 90
Query: 178 MLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-EDATNMNITK 236
+++ V DR +++ IF AK+ E LQ+ +A+L Y R + + D + +
Sbjct: 91 NIEEAIDRKVIDRTSLILDIFAKRAKSAEGMLQVELAQLKYRLPRLQGLGNDLSRLGGGI 150
Query: 237 GF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGK 289
G L++ R + ER + +++ L LK RE++R ++++ K P VA+VGYTN GK
Sbjct: 151 GTRGPGETKLETDRRYIRERIKTIERKLEDLKRHRELLRGRRRKNKIPVVAIVGYTNAGK 210
Query: 290 TTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKV 349
+TL+ ALTD S+ ++LFATLD T + LP+ ++ +DT+GFI +P L+E FK
Sbjct: 211 STLMNALTDS-SVYVEDKLFATLDPTARKLELPSGRDVILIDTVGFIRKLPHDLVEAFKS 269
Query: 350 TLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP-- 407
TLE+ AD+++HV+D+S D + + V+ L+ L++ +K +V + +D +P
Sbjct: 270 TLEELKYADVLLHVIDISAKDVMHKIGVVESVLKDLDVIDKPKINVYNKSDLLDKIPENK 329
Query: 408 GERVTEEYDLLISATRGTGLAQL 430
G+ V ISA G+ +L
Sbjct: 330 GDNV------YISAKERIGIDEL 346
>gi|427401455|ref|ZP_18892527.1| GTP-binding protein HflX [Massilia timonae CCUG 45783]
gi|425719564|gb|EKU82496.1| GTP-binding protein HflX [Massilia timonae CCUG 45783]
Length = 412
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 187/365 (51%), Gaps = 45/365 (12%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSV--DVLKLHQQKMLQDLFQVPVFDRYMI 193
S D F G G + ++ DA+ + + L QQ+ L+ Q+ V DR +
Sbjct: 52 SPDPAHFVGSGKAD----EIALDAKALGAEIVIFNHALSPAQQRNLERRLQLRVIDRTSL 107
Query: 194 VIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKR 243
++ IF AK+ E +LQ+ +A+L +L TR I T++ KG L++ R
Sbjct: 108 ILDIFAQRAKSHEGKLQVELAQLQHLATRL--IRGWTHLERQKGGIGLRGPGETQLETDR 165
Query: 244 MVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLV 303
++ ER + L+ L KL+ Q E R ++ R K +V++VGYTN GK+TL LT V
Sbjct: 166 RLIGERVKMLRARLGKLRKQHETQRRQRGRNKTFSVSLVGYTNAGKSTLFNTLTKAGVYV 225
Query: 304 PRNQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
NQLFATLD T+ L + + ++ DT+GF+ +P L+ F+ TLE+ + AD+++H
Sbjct: 226 A-NQLFATLDTTSRRMYLGDEVGSVVISDTVGFVRELPHQLVAAFRATLEETIHADLLLH 284
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELEEKILEHV--LVVGNKVDA--VPPG-ERVTEEYD- 416
VVD ++P ++Q + V+E L+ + +HV ++V NK+DA + PG ER +EYD
Sbjct: 285 VVDSASPTRMEQVEQVNEVLREIG-----ADHVPQILVWNKIDAAGLEPGVER--DEYDK 337
Query: 417 ---LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIRED 473
+ ISA G GL L+ + + A G GG +H + E+
Sbjct: 338 INRVFISAHSGAGLDLLRSAIAEAAKSAPG---------PGGYSNPENEEHDEAFGLAEE 388
Query: 474 DTSAE 478
D S +
Sbjct: 389 DASVD 393
>gi|334336771|ref|YP_004541923.1| GTP-binding proten HflX [Isoptericola variabilis 225]
gi|334107139|gb|AEG44029.1| GTP-binding proten HflX [Isoptericola variabilis 225]
Length = 510
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 170/342 (49%), Gaps = 27/342 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G +V+D + D ++ G G L V A V A V D L
Sbjct: 116 AALAETAGSQVLDGLLQRRQKPDPGTYLGSGKAAELADVV---AAVGADTVIADTELAPS 172
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRT--------- 225
Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R
Sbjct: 173 QRRALEDIVKVKVVDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQA 232
Query: 226 ---IEDATNMNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
+ A ++G ++K R + R KL++ + + R R +++R P
Sbjct: 233 GGQVGSAGAGMGSRGPGETKIELDRRRIRNRMAKLRREIAAMAPARVTKRLERKRHSIPN 292
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+ GYTN GK++L+ ALTD LV N LFATLD T + DT+GF+ +
Sbjct: 293 VAIAGYTNAGKSSLLNALTDAGVLV-ENALFATLDPTVRRARTDDGRVYTLADTVGFVRH 351
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+P L+E F+ TLE+ A +++HVVD S+PD Q V E L + E + E +VV
Sbjct: 352 LPHQLVEAFRSTLEEVADAALLLHVVDASHPDPEGQIAAVREVLSEIPGVEDVPE--VVV 409
Query: 399 GNKVDAVPPG--ERVT--EEYDLLISATRGTGLAQLKEKVQD 436
NK D P R+ E +++SA G G+A+LK + D
Sbjct: 410 LNKADVADPAVVGRIQRRERRTVVVSAHTGEGIAELKALIAD 451
>gi|383771935|ref|YP_005451000.1| GTP-binding protein HFLX [Bradyrhizobium sp. S23321]
gi|381360058|dbj|BAL76888.1| GTP-binding protein HFLX [Bradyrhizobium sp. S23321]
Length = 465
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 193/393 (49%), Gaps = 32/393 (8%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQ 184
V D+ I + ++ GKG +E + R + V +D L QQ+ L+
Sbjct: 73 VADAIIAPVSQIRPATYIGKGKVEEIAALARS---LDVELVVMDCALAPIQQRNLEKELN 129
Query: 185 VPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------ 238
V DR ++++IF AKT+E LQ+ +A L Y R R + T++ +G
Sbjct: 130 TKVLDRTGLILEIFGRRAKTKEGSLQVELAHLNY--QRSRLVRSWTHLERQRGGFGFMGG 187
Query: 239 -----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLI 293
+++ R ++ ER KL+ L K++ R + R +QR + VA+VGYTN GK+TL
Sbjct: 188 PGETQIEADRRLIQERISKLESELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLF 247
Query: 294 KALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLED 353
LT D + + LFATLD T LP+ + + DT+GFISN+PT L+ F+ TLE+
Sbjct: 248 NRLTRAD-VQAADMLFATLDPTLRALSLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEE 306
Query: 354 AMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP------- 406
+ AD+I+HV D+S+ D Q+ VD L+ L + ++ V NK+D
Sbjct: 307 VLEADVILHVRDISHEDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKIDRYDAEQREEL 366
Query: 407 ---PGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG-GSEYQWLM 462
R + +L+SA G G+ L +++ + A R + + + + G+ WL
Sbjct: 367 LNIAARRPEDHPAMLVSAVTGEGVDALLAAIEERL--AAKRHTLDLSIDAADGAGISWLH 424
Query: 463 KHTAVSNIREDDTSAEHLL-LDVVMTDVIMNKF 494
+++ V D + + +D D+++N+F
Sbjct: 425 RNSEVLAKELHDGRFDMTVRVDETKRDIVVNRF 457
>gi|13470637|ref|NP_102206.1| GTP binding protein-like [Mesorhizobium loti MAFF303099]
gi|14021379|dbj|BAB47992.1| GTP binding protein-like [Mesorhizobium loti MAFF303099]
Length = 431
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 171/329 (51%), Gaps = 25/329 (7%)
Query: 127 VDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD-VLKLHQQKMLQDLFQV 185
V + ++++ + G G +E + V+ + A V VD L QQ+ L+
Sbjct: 42 VHTAVVTVNDPRPATLLGSGKVEEFAQIVKDN---DAELVIVDHPLTPVQQRNLEKELHA 98
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT---RYRTIEDATNMNIT 235
V DR ++++IF A+T+E LQ+ +A L Y WT R R
Sbjct: 99 KVLDRTGLILEIFGERARTKEGTLQVELAHLNYQKGRLVRSWTHLERQRGGA-GFLGGPG 157
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ ++S R L E+ KLK L ++ R++ R K+++ FP VA+VGYTN GK+TL
Sbjct: 158 ETQIESDRRQLQEKIIKLKHELETVRRTRDLHRAKRKKVPFPVVAIVGYTNAGKSTLFNR 217
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT D L ++ LFATLD T LP+ I+ DT+GFIS++PT L+ F+ TLE+ +
Sbjct: 218 LTGADVLA-QDMLFATLDPTLRRVRLPHGTPIILSDTVGFISDLPTHLIAAFRATLEEVV 276
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER---VT 412
AD++IH+ D+S+PD Q + V+ L L ++ + V+ V NKVD + G R +
Sbjct: 277 EADLVIHLRDISDPDTAAQAEDVERILADLGVDAGDTKRVIEVWNKVDLLDEGNRSRLLA 336
Query: 413 EEYD------LLISATRGTGLAQLKEKVQ 435
+ D + ISA G G+ LK ++
Sbjct: 337 DAVDGSKGPPIAISAVTGEGIEALKAVIE 365
>gi|384914720|ref|ZP_10015472.1| putative GTPase [Methylacidiphilum fumariolicum SolV]
gi|384527337|emb|CCG91340.1| putative GTPase [Methylacidiphilum fumariolicum SolV]
Length = 441
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 183/342 (53%), Gaps = 21/342 (6%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G +++ + L S + GKG + + ++ + +V+ V + D+ + Q + L L
Sbjct: 40 GGCIIERIVQRLSSPTAPFYIGKGKAKEIA-EICKEKKVSFVLFNDDLSPI-QCRNLSSL 97
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTR----YRTIEDATNMNITKGF 238
F V DR +++ IF AKTRE +LQI +A+L YL R + + T T+G
Sbjct: 98 FGCKVLDRTQLILDIFAQRAKTREGKLQIELAQLLYLLPRLTRLWTHLSRQTGGIGTRGP 157
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
L+ R + E+ +LKK L ++K R + R+ +Q+ +PT +VGYTN GK+TL
Sbjct: 158 GETQLEVDRRRIQEKIHRLKKELEEVKKTRFIQRSCRQKSSWPTACLVGYTNAGKSTLFN 217
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT+ LV N+LFATLD T +I DT+GFI +P L+E FK TLE+
Sbjct: 218 LLTNSKVLV-ENKLFATLDPTIRLFEASGGQKIFLSDTVGFIQKLPFHLVESFKATLEEV 276
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG---ERV 411
AD++IH+VD+S+P Q + V++ L+ L +K ++V NK+D V +R
Sbjct: 277 KEADLLIHLVDISHPLSENQIEEVNKVLEQLGALDK---PTILVWNKIDLVKSNGLIKRR 333
Query: 412 TEEY--DLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
+EY + ISA G G +L K++ + T R+ +++++
Sbjct: 334 IQEYPGSVPISAATGEGCEKLLLKIEQWL--KTKRRYLSLKL 373
>gi|402849150|ref|ZP_10897390.1| GTP-binding protein HflX [Rhodovulum sp. PH10]
gi|402500463|gb|EJW12135.1| GTP-binding protein HflX [Rhodovulum sp. PH10]
Length = 465
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 187/361 (51%), Gaps = 30/361 (8%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQ 184
VV+S I+ L + ++ GKG +E + V+ A V +D L QQ+ L+ +
Sbjct: 71 VVESGIVLLGAVRPSTYLGKGKVEEIAGLVKS---TEASLVVMDCALSPVQQRNLEKAWN 127
Query: 185 VPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------ 238
V DR ++++IF A TRE LQ+ +A L Y + R + T++ +G
Sbjct: 128 AKVVDRTGLILEIFGRRAATREGTLQVELAHLTY--QKSRLVRSWTHLERQRGGFGFLGG 185
Query: 239 -----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLI 293
L++ R ++ +R ++++ L+ +K R + R ++R +P VA+VGYTN GK+TL
Sbjct: 186 PGETQLETDRRIIQDRIRRIEHDLDTVKRTRALHRTSRKRVPYPIVALVGYTNAGKSTLF 245
Query: 294 KALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLED 353
LT L + LFATLD T LP+ R++ DT+GF+S++PT L+ F+ TLE+
Sbjct: 246 NRLTRSGVLA-TDMLFATLDPTLRAVDLPDGPRVILSDTVGFVSDLPTMLVAAFRATLEE 304
Query: 354 AMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE---- 409
+ AD+I+HV DVS+ D Q + VD L L + + +L V NK+D V E
Sbjct: 305 VIEADLILHVRDVSHGDTQAQSKDVDTVLAELGIPPED-PRLLEVWNKIDNVSAEERERL 363
Query: 410 ------RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMK 463
R E+ L+SAT G GL L + + + K +T+ + G+ + WL +
Sbjct: 364 ENLASRRPPEKRPQLVSATTGQGLDALIRDISERVAKTRVPLTVTLDA-ADGAGFGWLHR 422
Query: 464 H 464
H
Sbjct: 423 H 423
>gi|223939697|ref|ZP_03631570.1| GTP-binding proten HflX [bacterium Ellin514]
gi|223891654|gb|EEF58142.1| GTP-binding proten HflX [bacterium Ellin514]
Length = 414
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 157/301 (52%), Gaps = 17/301 (5%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
+F G G + R + T +F D L Q + L+ +F + DR +++ IF
Sbjct: 49 TFIGSGKAQEFARHCVSNEVDTVIFD--DELTPAQSRNLEQVFNCKILDRTSLILDIFAQ 106
Query: 201 HAKTREARLQIAIAELPYL-------WTRYRTIEDATNM-NITKGFLDSKRMVLMEREQK 252
A+T+E +LQI +A+L +L W + M + L++ R + +R +
Sbjct: 107 RARTKEGKLQIELAQLQHLLPRLTRFWGHLSRQKGGIGMRGDGETQLETDRRRVQDRIAR 166
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
+ + L ++ QR R+ +QR +P ++VGYTN GK+TL+ A+T D L N+LFATL
Sbjct: 167 IARELEVVRRQRSTQRHGRQRNLWPLASIVGYTNAGKSTLLNAVTGADVLA-ENKLFATL 225
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT LP +L DT+GFI +P L+E FK TLE+ + AD++IHVVD S+P
Sbjct: 226 DPTTRRLRLPTNQNVLLTDTVGFIRKLPHNLVEAFKATLEEVVQADLLIHVVDGSSPQAE 285
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER---VTEEYDLLISATRGTGLAQ 429
+Q V+ L + K ++V NK+D + GER + + ISA G G+ +
Sbjct: 286 EQIAAVNAVLDEIGAAGK---PTMMVFNKIDKLVNGERNFIQSVPNAVAISAKTGEGIPE 342
Query: 430 L 430
L
Sbjct: 343 L 343
>gi|396585113|ref|ZP_10485544.1| GTP-binding protein HflX [Actinomyces sp. ICM47]
gi|395547203|gb|EJG14693.1| GTP-binding protein HflX [Actinomyces sp. ICM47]
Length = 510
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 173/347 (49%), Gaps = 30/347 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G RV+D I + D ++ G G L VR V A V VD L
Sbjct: 105 AALAETAGSRVLDGIIQRRMKPDPATYLGSGKARELADIVRS---VEADTVIVDEELAPS 161
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 162 QRRGLEDVVDAKVVDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQA 221
Query: 235 -----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
TK LD +R + R KL+ + +++ R R ++R P
Sbjct: 222 GGRVAGGAGIGSRGPGETKIELDRRR--IRTRMAKLRADIARMEPARRTQRGSRRRGAVP 279
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+VA+ GYTN GK+TL+ LTD LV ++ LFATLD T + DT+GF+
Sbjct: 280 SVAIAGYTNAGKSTLLNRLTDAGVLV-QDALFATLDPTVRRARAADGREYTLTDTVGFVR 338
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
N+PT L+E F+ TLE+ AD+I+HVVD ++PD + Q Q V + +E I E L+
Sbjct: 339 NLPTQLVEAFRSTLEEVGQADVILHVVDAAHPDPVSQVQAVRAVIDTIEGASDIPE--LI 396
Query: 398 VGNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
NK D P + R + +SA G G+ L+ ++DM+ +
Sbjct: 397 ALNKADLASPEQIALLRTVFPGAVPLSAHTGWGVDALRAALEDMLPR 443
>gi|315655233|ref|ZP_07908134.1| GTP-binding protein [Mobiluncus curtisii ATCC 51333]
gi|315490488|gb|EFU80112.1| GTP-binding protein [Mobiluncus curtisii ATCC 51333]
Length = 525
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 166/321 (51%), Gaps = 34/321 (10%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVD-VLKLHQQKMLQDLFQVPVFDRYMIVIQ 196
D +F G+G L+ QV A + A V VD L Q++ L+D+ +V V DR +++
Sbjct: 136 DVATFLGRGKAHELQTQV---ATLGADTVIVDDELAPSQRRALEDVVKVKVIDRTALILD 192
Query: 197 IFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI-----------------TKGFL 239
IF HA +RE + Q+ +A+L YL R R ++ + TK L
Sbjct: 193 IFAQHATSREGKAQVELAQLEYLLPRLRGWGESMSRQAGGRAAAGDGIGARGPGETKIEL 252
Query: 240 DSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDD 299
D +R+ +L++ L L RE R ++ P VA+VGYTN GK++L+ L
Sbjct: 253 DRRRIRSRM--ARLRRTLKALAPTREAKRASRKAGGIPAVAIVGYTNAGKSSLLNRLAGA 310
Query: 300 DSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADI 359
+ LV + LFATLD + P DT+GF+ +PT L+E F+ TLE+ +AD+
Sbjct: 311 NLLV-HDALFATLDPSVRRAHTPEGREYTLADTVGFVRRLPTELVEAFRSTLEETAMADL 369
Query: 360 IIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD-AVPPG-----ERVTE 413
I+HVVD SNPD + Q VD TL+ +E E++ V++V NK+D A P + E
Sbjct: 370 ILHVVDGSNPDPMAQVAAVDATLELVEGIEEV--PVMMVVNKIDQASAPALALLRHSLPE 427
Query: 414 EYDLLISATRGTGLAQLKEKV 434
Y +SA G G+ L++ +
Sbjct: 428 AY--YVSALTGEGIEALQQAI 446
>gi|255066262|ref|ZP_05318117.1| GTP-binding protein HflX [Neisseria sicca ATCC 29256]
gi|255049472|gb|EET44936.1| GTP-binding protein HflX [Neisseria sicca ATCC 29256]
Length = 377
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/368 (31%), Positives = 183/368 (49%), Gaps = 29/368 (7%)
Query: 98 GKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKS---FFGKGNLELLKRQ 154
G R T L E+ LV++ G V+ T DK F G G E L
Sbjct: 13 GANEVRERTFQTTLDEAAELVAAAGGELVLRETA----KRDKAHTAYFVGTGKAEELAAA 68
Query: 155 VRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIA 214
V+ AVF L Q++ L+ + Q V DR +++ IF A+++E +LQ+ +A
Sbjct: 69 VKLHDIGLAVFNHE--LTPTQERNLEKILQCRVLDRVGLILAIFAKRAQSQEGKLQVELA 126
Query: 215 ELPYLWTR----YRTIEDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREM 266
+L +L R Y ++ KG L++ R ++ ++ LKK L ++K QR
Sbjct: 127 QLNHLSGRLVRGYGHLQSQKGGIGLKGPGETQLETDRRLIGQKITALKKQLAQVKKQRAT 186
Query: 267 MRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLR 326
R + + T A+VGYTN GK++L LT D L ++QLFATLD T L +
Sbjct: 187 RRKSRMEGRLKTFAIVGYTNAGKSSLFNRLTKADVL-AKDQLFATLDTTARRLFLSHEAG 245
Query: 327 ILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLE 386
++ DT+GF+ ++P L+ F TLE+ LAD+++HVVD SNPD+ +Q V+ L+ +
Sbjct: 246 VILTDTVGFVRDLPHKLVSAFSATLEETALADVLLHVVDASNPDFERQMDDVNVVLEEIG 305
Query: 387 LEEKILEHVLVVGNKVDAVPPGERVT--------EEYDLLISATRGTGLAQLKEKVQDMI 438
E LVV NK+D +P G R T + IS + GL L+E + + +
Sbjct: 306 AHEV---PQLVVYNKIDLLPQGVRDTGVLRDNSGRAVGVNISVAKSLGLDALREAMIERV 362
Query: 439 LKATGRKN 446
L+ G+++
Sbjct: 363 LENGGKRS 370
>gi|226312943|ref|YP_002772837.1| GTP-binding protein HflX [Brevibacillus brevis NBRC 100599]
gi|226095891|dbj|BAH44333.1| probable GTP-binding protein HflX [Brevibacillus brevis NBRC
100599]
Length = 430
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 178/341 (52%), Gaps = 15/341 (4%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V+D + D + G G ++ + + R + V + D L Q + L +
Sbjct: 41 GVEVLDVITQNRDRVDSAWYLGTGKIDEIAQ--RAEELDVDVIIFNDELSPSQTRNLDKV 98
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNI 234
F V DR +++ IF A++RE ++Q+ +A+ YL R R
Sbjct: 99 FDCKVIDRTQLILDIFAGRAQSREGKIQVELAQYNYLLPRLAGQGKQLSRLGGGIGTRGP 158
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ L+S R + +R +LK+ L R++ R ++++ +A+VGYTN GK+T++
Sbjct: 159 GETKLESDRRHIRKRISELKQQLEDTVRTRQLHRERRKKNNVFQIALVGYTNAGKSTILN 218
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT+ ++L ++LFATLD TT + LP+ L +L DT+GFI ++PT+L+ F+ TLE
Sbjct: 219 KLTNANTL-QEDKLFATLDPTTRQLELPSGLDVLLTDTVGFIQDLPTSLVAAFRSTLEGV 277
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTE- 413
AD+I+HVVD +PD+ + VD+ L+ L+ EE + H LVV NK D + G +
Sbjct: 278 KEADLILHVVDSHHPDFQVHMEVVDKILRELKAEE--IPH-LVVFNKADMLTEGSYLPRA 334
Query: 414 EYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG 454
+ +LISA R L QL +++ L++ + + V G
Sbjct: 335 DESILISAMREDDLKQLLTRIESFALQSFNAMKLRVPVERG 375
>gi|154509064|ref|ZP_02044706.1| hypothetical protein ACTODO_01581 [Actinomyces odontolyticus ATCC
17982]
gi|153798698|gb|EDN81118.1| GTP-binding protein HflX [Actinomyces odontolyticus ATCC 17982]
Length = 512
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 174/347 (50%), Gaps = 30/347 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G RV+D I + D ++ G G L VR V A V VD L
Sbjct: 107 AALAETAGSRVLDGIIQRRMKPDPATYLGSGKARELADIVRS---VEADTVIVDEELAPS 163
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 164 QRRGLEDVVDAKVVDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQA 223
Query: 235 -----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
TK LD +R + R KL+ + +++ R RN ++R P
Sbjct: 224 GGRVAGGAGIGSRGPGETKIELDRRR--IRTRMAKLRADIARMEPARRTQRNSRRRGAVP 281
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+V + GYTN GK+TL+ LTD LV ++ LFATLD T + DT+GF+
Sbjct: 282 SVVIAGYTNAGKSTLLNRLTDAGVLV-QDALFATLDPTVRRARAADGREYTLTDTVGFVR 340
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
N+PT L+E F+ TLE+ ADII+HVVD ++PD + Q Q V + +E +I E L+
Sbjct: 341 NLPTQLVEAFRSTLEEVGQADIILHVVDAAHPDPVSQVQAVCSVIDTIEGASEIPE--LI 398
Query: 398 VGNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
NK D P + R + +SA G G+ L+ ++DM+ +
Sbjct: 399 ALNKADLASPEQIALLRTVFPNAVPLSAHTGWGVEALRAALEDMLPR 445
>gi|83953588|ref|ZP_00962309.1| GTP-binding protein HflX [Sulfitobacter sp. NAS-14.1]
gi|83841533|gb|EAP80702.1| GTP-binding protein HflX [Sulfitobacter sp. NAS-14.1]
Length = 412
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 189/375 (50%), Gaps = 26/375 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
LAE+ AL ++ V + I+ L + FG G +E L R V +A V V V V
Sbjct: 19 LAEAVALARALPHLDVEGANIVPLRTVSAGMLFGSGKIEEL-RLVFEEAEVELVLVDGPV 77
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
+ QQ+ L+ + V + DR ++++IF A TRE LQ+ +A L Y R R + T
Sbjct: 78 TPV-QQRNLEKAWGVKLLDRTGLILEIFSDRAATREGVLQVEMAALNY--QRTRLVRAWT 134
Query: 231 NMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +G ++S R + E+ +L++ L+K+ R + R + + FP V
Sbjct: 135 HLERQRGGLGFVGGPGETQIESDRRAIDEQLVRLRRQLDKVVKTRALHRAARAKVPFPIV 194
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL +T D ++ ++ LFATLD T +LP+ I+ DT+GFIS++
Sbjct: 195 ALVGYTNAGKSTLFNRMTGAD-VMAKDMLFATLDPTMRSLVLPDGPEIILSDTVGFISDL 253
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+ F+ TLE+ + ADII HV D+S+ + Q ++V + L L + + V
Sbjct: 254 PTELVAAFRATLEEVLAADIICHVRDISHAETESQARNVRDILTSLGVPKDT--RSFEVW 311
Query: 400 NKVDAVPPGERVTEEYD-------LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVR 452
NK+D + L ISA G GL +L+ + + + A +T+
Sbjct: 312 NKLDQLDDDRAAAVRARAQRDDSVLAISAITGEGLEELQAVIAEALQGAVREAELTLAF- 370
Query: 453 SGGSEYQWLMKHTAV 467
+ G + WL + V
Sbjct: 371 ADGKKRAWLFEQDVV 385
>gi|427441526|ref|ZP_18925325.1| GTP-binding protein HflX [Pediococcus lolii NGRI 0510Q]
gi|425787048|dbj|GAC46113.1| GTP-binding protein HflX [Pediococcus lolii NGRI 0510Q]
Length = 430
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 159/298 (53%), Gaps = 23/298 (7%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D+ +AE K+L S+ RV+D L + ++FGKG +E L QV AR V
Sbjct: 23 DYAMAELKSLASA-NHMRVMDQLTQKLERPNAATYFGKGKIEELT-QVAA-AREVETLVV 79
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRT-- 225
D L Q L+ Q+ V DR ++++IF A+++EARLQ+ +A+L Y R RT
Sbjct: 80 NDELTPSQLSNLEKETQLRVIDRTGLILEIFANRARSKEARLQVELAKLQYQLPRLRTSA 139
Query: 226 ---IEDATNMNITKGF---------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQR 273
++ T N GF L+ R + R + + L ++ + R ++ +
Sbjct: 140 TQRLDQQTAGNTGGGFTNRGAGETKLELNRRTIRNRINHINQELKEMSTSANVQRQRRDK 199
Query: 274 QKFPTVAVVGYTNCGKTTLIKAL------TDDDSLVPRNQLFATLDVTTHEGMLPNRLRI 327
+ P+VA+VGYTN GK+T + L +D + ++ LFATLD + + P++ +
Sbjct: 200 KDIPSVALVGYTNTGKSTTMNGLISMYGRNEDKQVFEKDMLFATLDTSVRKLTFPDQKEL 259
Query: 328 LYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL 385
+ DT+GF+SN+P L++ F+ TL +A AD+++ VVDVS+P Y + Q +TLQ +
Sbjct: 260 ILSDTVGFVSNLPHQLVKAFRSTLSEAAKADLLVQVVDVSDPHYREMMQTTADTLQEI 317
>gi|313679731|ref|YP_004057470.1| GTP-binding protein hflx [Oceanithermus profundus DSM 14977]
gi|313152446|gb|ADR36297.1| GTP-binding protein HflX [Oceanithermus profundus DSM 14977]
Length = 554
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 165/330 (50%), Gaps = 18/330 (5%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G VV ++ + D + G+G L+ L + T +F VD L Q
Sbjct: 209 AELARTAGGVVVHRELVYRPTLDPRYAVGRGKLDELTSVAYHENAGTLIF-GVD-LTPAQ 266
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIE 227
++ Q+ V DR +++ IF HA+T +A Q+ +A+L YL R R
Sbjct: 267 AGAIEQATQLKVLDRTQLILDIFARHARTPQAEAQVELAQLRYLLPRLVGKGKQLSRLGG 326
Query: 228 DATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
+ L+ R + ER +L + + ++ QR R ++R + P VA+VGYTN
Sbjct: 327 GIGTRGPGETKLEVDRRRIGERIHRLTREIERIAKQRREARKSRKRNRVPVVAIVGYTNA 386
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GKTTL++ALT N+LFATL T G LP +L+ DT+GFI ++P L+ F
Sbjct: 387 GKTTLLRALTRKGD-AGENKLFATLRPLTRRGYLPGYGEVLFTDTVGFIRDMPPALVTAF 445
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP 407
+ TLE+ AD+++HVVD + L+ + V++ L + LE LVV NK+D P
Sbjct: 446 RATLEELFEADLVLHVVDATADGALEHHRVVEDRLVEMGLEAP----RLVVVNKIDRADP 501
Query: 408 GERVTEEYDL---LISATRGTGLAQLKEKV 434
+R+ E L +SA G GL L ++
Sbjct: 502 FDRMRLEEQLDGVAVSALEGRGLEDLASRI 531
>gi|366052541|ref|ZP_09450263.1| GTP-binding protein HflX [Lactobacillus suebicus KCTC 3549]
Length = 428
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 172/334 (51%), Gaps = 26/334 (7%)
Query: 90 VVQPFIKWGKKMKRNTTR-DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL 148
+ +P I G + D+ + E LV + + +V D + SL + ++FGKG +
Sbjct: 6 ITEPVIIAGLNLSNQENDFDYSMEELANLVEANE-MKVSDKMVQSLDRPNAATYFGKGKV 64
Query: 149 ELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREAR 208
E L V A A V+ D L Q + L++ + V DR ++++IF A+++EA+
Sbjct: 65 EELAELVA--ATNVATIVTNDELSPSQIRNLEEATKARVMDRTALILEIFAKRAQSKEAK 122
Query: 209 LQIAIAELPYLWTRYRTIEDA-------------TNMNITKGFLDSKRMVLMEREQKLKK 255
LQ+ IA+L Y R +T + TN + L+ R + L+
Sbjct: 123 LQVEIAQLQYRLPRLKTSANQRLDQQTGAGGGSFTNRGSGETKLEMNRRTIQNAITHLRG 182
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALT------DDDSLVPRNQLF 309
L +L E R ++ ++ PT A+VGYTN GK+T++ L D+ + +N LF
Sbjct: 183 ELAELNKSSETQRQQRDKRGIPTAALVGYTNAGKSTIMNGLVREFGIDDEKQVFEKNMLF 242
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD + + LP++ + L DT+GF+S +PT L+E FK TL +A AD++I V+D S+P
Sbjct: 243 ATLDTSVRQLTLPDQKQFLLSDTVGFVSKLPTHLVEAFKSTLAEAANADLLIQVIDYSDP 302
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
Y + Q + TL+ + +++ + ++V NK D
Sbjct: 303 HYQEMMQTTENTLKEIGIKDIPM---ILVFNKAD 333
>gi|298253511|ref|ZP_06977301.1| GTPase [Gardnerella vaginalis 5-1]
gi|297532278|gb|EFH71166.1| GTPase [Gardnerella vaginalis 5-1]
Length = 507
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 178/360 (49%), Gaps = 26/360 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLH 174
A ++ G V D + D ++ G G EL + DA V D L
Sbjct: 114 AALAQTAGAVVCDGMLQQRYRPDAATYVGSGKARELAAVVAQHDADTIIVD---DDLPPS 170
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--- 231
Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 171 QRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQVELAQLQYMLPRLRGWGAALSRQA 230
Query: 232 --------MNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++G ++K R + R KL+ + + R++ R ++R+ PTV
Sbjct: 231 GGRAAGDAGIGSRGPGETKIEMDRRAIRNRISKLRHDIANMAPARDVKRGSRRRRDIPTV 290
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GK+++I LT LV N LFATLD + VDT+GF+ +
Sbjct: 291 AVVGYTNAGKSSIINRLTGSQELV-ENALFATLDTAVRRSQTQDGRSYTLVDTVGFVRRL 349
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E FK TLE+ AD+I+HVVD S+PD + Q V+E L ++ I + ++
Sbjct: 350 PTQLVEAFKSTLEEVGQADVILHVVDGSHPDPISQINAVNEVLANISGVGDIPQ--IMAL 407
Query: 400 NKVDAVPPG--ERVTEEYD--LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGG 455
NK D + ER + Y +++SA G L L+ ++++++ R ++T+ GG
Sbjct: 408 NKSDMMSDAARERFSSLYPDAVIVSAFSGENLQILRNRLEELLPSPRVRVDVTLPYEFGG 467
>gi|422011323|ref|ZP_16358156.1| GTP-binding protein HflX [Actinomyces georgiae F0490]
gi|394765660|gb|EJF47027.1| GTP-binding protein HflX [Actinomyces georgiae F0490]
Length = 499
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 173/346 (50%), Gaps = 28/346 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G RV+D I D ++ G G + L VR A + + L Q
Sbjct: 101 AALAETAGSRVMDGVIQRRSLPDPATYLGSGKAKELADIVR--AHEADTVIVDEELAPSQ 158
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI- 234
++ L+D+ V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 159 RRGLEDVVDAKVVDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQAG 218
Query: 235 ----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
TK LD +R + R KLK + +++ R R ++R + P+
Sbjct: 219 GRVAGGAGIGSRGPGETKIELDRRR--IRTRMAKLKAEIARMEPARRTQRRARRRGRVPS 276
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+ GYTN GK+TL+ LTD LV + LFATLD T + DT+GF+ N
Sbjct: 277 VAIAGYTNAGKSTLLNRLTDAGVLV-EDALFATLDPTVRRARTADGREYTLTDTVGFVRN 335
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+PT L+E F+ TLE+ AD+++HVVD ++PD + Q + V L +E ++I E L+
Sbjct: 336 LPTQLVEAFRSTLEEVGAADVLLHVVDAAHPDPVSQVEAVRSVLSGIEGADRIPE--LIA 393
Query: 399 GNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
NK D P + R + +SA G G+ L+ ++D++ +
Sbjct: 394 LNKADLATPEQLAVLRTAFPDSVALSAKTGYGIGTLRAALEDLLPR 439
>gi|421866989|ref|ZP_16298651.1| GTP-binding protein HflX [Burkholderia cenocepacia H111]
gi|358073153|emb|CCE49529.1| GTP-binding protein HflX [Burkholderia cenocepacia H111]
Length = 390
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 178/339 (52%), Gaps = 28/339 (8%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E +L++S G R + S D K F G G E L+ + DA + + L
Sbjct: 21 EELSLLASSAGARPAVTLTGRRASPDAKMFIGSGKAEELR--LACDAHNVEIVIFNHALA 78
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
QQ+ L+ V DR +++ IF A++ E +LQ+ +A+L YL TR I T++
Sbjct: 79 PAQQRNLEQALNRRVVDRTSLILDIFAQRARSHEGKLQVELAQLQYLSTRL--IRAWTHL 136
Query: 233 NITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
KG L++ R ++ ER + LK L++L+ Q R ++ R +V++V
Sbjct: 137 ERQKGGIGLRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSGTMSVSLV 196
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPT 341
GYTN GK+TL ALT + +QLFATLD T+ L + + +I+ DT+GFI +P
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAA-DQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPH 255
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
L+ F+ TLE+ + AD+++HVVD S+ L+Q + V+ L E+ + + VLV NK
Sbjct: 256 QLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLH--EIGAETIRQVLVF-NK 312
Query: 402 VDAVPP----GERVT-EEYD----LLISATRGTGLAQLK 431
+DAVP G+ V +EY + +SA G GL L+
Sbjct: 313 IDAVPELAARGDAVERDEYGNISRVFLSARTGQGLDTLR 351
>gi|270290754|ref|ZP_06196978.1| GTP-binding protein HflX [Pediococcus acidilactici 7_4]
gi|418068640|ref|ZP_12705922.1| GTPase [Pediococcus acidilactici MA18/5M]
gi|270280814|gb|EFA26648.1| GTP-binding protein HflX [Pediococcus acidilactici 7_4]
gi|357539376|gb|EHJ23395.1| GTPase [Pediococcus acidilactici MA18/5M]
Length = 430
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 159/298 (53%), Gaps = 23/298 (7%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D+ +AE K+L S+ RV+D L + ++FGKG +E L QV AR V
Sbjct: 23 DYAMAELKSLASA-NHMRVMDQLTQKLERPNAATYFGKGKIEELT-QVAA-AREVETLVV 79
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRT-- 225
D L Q L+ Q+ V DR ++++IF A+++EARLQ+ +A+L Y R RT
Sbjct: 80 NDELTPSQLSNLEKETQLRVIDRTGLILEIFANRARSKEARLQVELAKLQYQLPRLRTSA 139
Query: 226 ---IEDATNMNITKGF---------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQR 273
++ T N GF L+ R + R + + L ++ + R ++ +
Sbjct: 140 TQRLDQQTAGNTGGGFTNRGAGETKLELNRRTIRNRINHINQELKEMSTSANVQRQRRDK 199
Query: 274 QKFPTVAVVGYTNCGKTTLIKAL------TDDDSLVPRNQLFATLDVTTHEGMLPNRLRI 327
+ P+VA+VGYTN GK+T + L +D + ++ LFATLD + + P++ +
Sbjct: 200 KDIPSVALVGYTNTGKSTTMNGLISMYGRNEDKQVFEKDMLFATLDTSVRKLTFPDQKEL 259
Query: 328 LYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL 385
+ DT+GF+SN+P L++ F+ TL +A AD+++ VVDVS+P Y + Q +TLQ +
Sbjct: 260 ILSDTVGFVSNLPHQLVKAFRSTLSEAAKADLLVQVVDVSDPHYREMMQTTADTLQEI 317
>gi|336476416|ref|YP_004615557.1| GTP-binding proten HflX [Methanosalsum zhilinae DSM 4017]
gi|335929797|gb|AEH60338.1| GTP-binding proten HflX [Methanosalsum zhilinae DSM 4017]
Length = 425
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 209/409 (51%), Gaps = 33/409 (8%)
Query: 103 RNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVT 162
RN++R L E K L S G+ VVD + + D+ G+G + L R V
Sbjct: 18 RNSSR---LQELKELAES-AGYLVVDE-VTQTKNPDRNYQIGRGKADELSRIVAETGANK 72
Query: 163 AVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTR 222
+F + L + Q + + D++ ++++IF AKT+ A+ Q+ +A+L Y +
Sbjct: 73 IIFY--NQLSIMQIYNISQTCRCETIDKFHLILEIFATKAKTKRAKYQVELAKLHYELPK 130
Query: 223 YRTIEDATNMNITKGFL------DSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
+TI GF+ DS + R +L+ L +++ E +R + + F
Sbjct: 131 AKTIVSLLKKKERPGFMGLGSYEDSYEKDIKNRISRLRNELGRMQKDYENLRTTRHNKGF 190
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
VA+ GYTN GK+TL + D++ V N+LF TL TT + R ++L DT+GFI
Sbjct: 191 SIVALAGYTNAGKSTLFSEMVDENVEV-ENRLFTTLSPTTRSFQVNGR-KLLLTDTVGFI 248
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEH-V 395
++P L++ FK TL++ LAD+I+ VVDVS P + +K+ V H L E+I + +
Sbjct: 249 EDLPHWLIDAFKSTLDEIFLADVILLVVDVSEPVEIIKKKLV---ACHDTLWEQIEDAPI 305
Query: 396 LVVGNKVDAVPPGE---RVTE-EY----DLLISATRGTGLAQLKEKVQDMILKATGRKNI 447
+ V NKVD + + R++E EY ++ISA+ GTG+ LK+K+ L RK++
Sbjct: 306 IAVLNKVDRISEEDLVCRISEIEYLTPNPIIISASEGTGIETLKQKIFSY-LPVWKRKDL 364
Query: 448 TMRVR-SGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFK 495
+ + SG S WL V NI+ D +L+DV D ++NK K
Sbjct: 365 QLPISDSGMSIASWLFDEGIVHNIKYTD----RILVDVEARDEVINKAK 409
>gi|337741152|ref|YP_004632880.1| GTP-binding protein HflX [Oligotropha carboxidovorans OM5]
gi|386030168|ref|YP_005950943.1| GTP-binding protein HflX [Oligotropha carboxidovorans OM4]
gi|336095236|gb|AEI03062.1| GTP-binding protein HflX [Oligotropha carboxidovorans OM4]
gi|336098816|gb|AEI06639.1| GTP-binding protein HflX [Oligotropha carboxidovorans OM5]
Length = 463
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 205/414 (49%), Gaps = 38/414 (9%)
Query: 84 TDHQVFVVQPFIKWGKK------MKRNTTRD--FMLAESKALVSSIQGWRVVDSTIISLL 135
T +V VV P+++ + + + RD L E+ L +I V ++ I L
Sbjct: 23 TTGRVLVVGPYLRARRGSADIATIGSDAVRDPQARLDEAAGLARAID-LTVAEALIAPLS 81
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
++ GKG +E + ++ A + V L QQ+ L+ + V DR +++
Sbjct: 82 EIRPATYLGKGKVEDILGLIK--AHDVDLVVMDCALSPIQQRNLEKEWNAKVLDRTGLIL 139
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRM 244
+IF AKTRE LQ+ +A L ++ R R + T++ +G +++ R
Sbjct: 140 EIFGRRAKTREGTLQVELAHL--IYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRR 197
Query: 245 VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVP 304
++ ER +++ L K++ R + R ++R + VA+VGYTN GK+TL LT D +
Sbjct: 198 MIGERITRIENDLKKVQATRRLHRAGRKRVPYRVVALVGYTNAGKSTLFNRLTRAD-VQA 256
Query: 305 RNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
+ LFATLD T LP+ + + DT+GFIS++PT L+ F+ TLE+ + AD+I+HV
Sbjct: 257 ADMLFATLDPTLRALRLPHGGKAMISDTVGFISDLPTMLVAAFRATLEEVIEADVILHVR 316
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE----------RVTEE 414
D+S+ D Q++ VD L+ L + + ++ V NK+D P E R +
Sbjct: 317 DISHEDAEAQERDVDHVLRQLGIGTESGHRIIEVWNKIDCFSPEERENLARIAARRPADH 376
Query: 415 YDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG-GSEYQWLMKHTAV 467
L+SA G G+ L +++ + A R + +R+ + G W+ ++ V
Sbjct: 377 PCFLVSAETGEGIDALLAAIEERL--AALRTVLELRIDAADGEGISWIHRNAEV 428
>gi|134295837|ref|YP_001119572.1| small GTP-binding protein [Burkholderia vietnamiensis G4]
gi|134138994|gb|ABO54737.1| GTP-binding protein HflX [Burkholderia vietnamiensis G4]
Length = 396
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 178/339 (52%), Gaps = 28/339 (8%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E +L++S G R + S D K F G G E L+ + DA + + L
Sbjct: 26 EELSLLASSAGARPAVTLTGRRASPDAKMFIGSGKAEELR--LACDAHNVEIVIFNHALA 83
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
QQ+ L+ V DR +++ IF A++ E +LQ+ +A+L YL TR I T++
Sbjct: 84 PAQQRNLEQALNRRVVDRTSLILDIFAQRARSHEGKLQVELAQLQYLSTRL--IRAWTHL 141
Query: 233 NITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
KG L++ R ++ ER + LK L++L+ Q R ++ R +V++V
Sbjct: 142 ERQKGGIGLRGPGETQLETDRRLIGERIKMLKARLDRLRRQHSTQRRQRARSGTMSVSLV 201
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPT 341
GYTN GK+TL ALT + +QLFATLD T+ L + + +I+ DT+GFI +P
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAA-DQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPH 260
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
L+ F+ TLE+ + AD+++HVVD S+ L+Q + V++ L E+ + VLV NK
Sbjct: 261 QLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLH--EIGADTVRQVLVF-NK 317
Query: 402 VDAVPP----GERVT-EEYD----LLISATRGTGLAQLK 431
+DAVP G+ V +EY + +SA G GL L+
Sbjct: 318 IDAVPELAARGDAVERDEYGNISRVFLSARTGQGLDALR 356
>gi|338974519|ref|ZP_08629877.1| GTP-binding protein HflX [Bradyrhizobiaceae bacterium SG-6C]
gi|338232114|gb|EGP07246.1| GTP-binding protein HflX [Bradyrhizobiaceae bacterium SG-6C]
Length = 436
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 202/408 (49%), Gaps = 33/408 (8%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E+ L +I V ++ I L ++ GKG +E + ++ + V +D
Sbjct: 31 LEEAAGLARAID-LTVAEAVIAPLSDIRPATYLGKGKVEEMLGLIKAN---DVDLVVMDC 86
Query: 171 -LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA 229
L QQ+ L+ ++ V DR ++++IF AKTRE LQ+ +A L Y R R +
Sbjct: 87 ALSPVQQRNLEKEWKAKVLDRTGLILEIFGRRAKTREGALQVELAHLNY--QRSRLVRSW 144
Query: 230 TNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
T++ +G +++ R ++ ER K++ L K++ R + R +QR +
Sbjct: 145 THLERQRGGFGFMGGPGETQIEADRRMISERISKIESELKKVQATRRLHRAGRQRVPYRV 204
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+VGYTN GK+TL LT D + + LFATLD T LP+ + + DT+GFIS+
Sbjct: 205 VALVGYTNAGKSTLFNRLTRAD-VQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISD 263
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+PT L+ F+ TLE+ + AD+I+HV D+S+ D Q+ V+ L+ L ++ + +L V
Sbjct: 264 LPTMLVAAFRATLEEVIEADVILHVRDISHEDAEAQQHDVEGVLRQLGIDTDGGQRILEV 323
Query: 399 GNKVDAVP----------PGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNIT 448
NK+D R E +SA G GL L ++D + A R +
Sbjct: 324 WNKIDRFDEEGRANLMNIAARRPPERPCFPVSAETGEGLDALLAAIEDRL--AATRVTLD 381
Query: 449 MRV-RSGGSEYQWLMKHTAVSNIR-EDDTSAEHLLLDVVMTDVIMNKF 494
+ + S G+ WL ++ V + E+ A + +D+ D+ + KF
Sbjct: 382 LTIDPSDGAGISWLHRNAEVLDKHLENGRFAMTVRVDISKRDITIAKF 429
>gi|400754356|ref|YP_006562724.1| GTP-binding protein HflX [Phaeobacter gallaeciensis 2.10]
gi|398653509|gb|AFO87479.1| GTP-binding protein HflX [Phaeobacter gallaeciensis 2.10]
Length = 423
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 211/429 (49%), Gaps = 32/429 (7%)
Query: 84 TDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFF 143
T + +VV P IK + + + LAE +L ++ V+ S ++ L F
Sbjct: 6 TPTRAWVVHPDIKSDRDRRDPVS---ALAEGVSLAEALPDIEVIGSAVVRLPKAHAGMLF 62
Query: 144 GKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAK 203
G G ++ LK + D V V + V + QQ+ L+ ++V + DR ++++IF A+
Sbjct: 63 GSGKIDELKARFH-DEEVELVLIDGPVSPV-QQRNLEKAWKVKILDRTGLILEIFSDRAR 120
Query: 204 TREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQK 252
TRE LQ+ +A L Y R R + T++ +G +++ R + E+ +
Sbjct: 121 TREGVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDEQLVR 178
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
L++ L+K+ R + R + + +P VA+VGYTN GK+TL LT + ++ ++ LFATL
Sbjct: 179 LRRQLDKVVKTRTLHRAARAKIPYPIVALVGYTNAGKSTLFNRLTGAE-VMAKDMLFATL 237
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D T LP+ I+ DT+GFIS++PT L+ F+ TLE+ + AD+++HV D+S+ +
Sbjct: 238 DPTMRRVQLPDGPEIILSDTVGFISDLPTELVAAFRATLEEVLAADVVVHVRDISHDETQ 297
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVD------AVPPGERVTEEYDL-LISATRGT 425
Q V+ L L +++ L V NK+D A +R E + ISA G
Sbjct: 298 NQAADVESILASLGVDDS--RARLEVWNKLDLLDDEQAEARRQRAEREDGIHAISAISGE 355
Query: 426 GLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVV 485
GL L + + IT+ + G + WL + V + + + E L V+
Sbjct: 356 GLEDLLADITSQLRLIRHEDEITLTF-AQGKQRAWLFEQDVVQSETQTEIGFE---LTVL 411
Query: 486 MTDVIMNKF 494
T+ N+F
Sbjct: 412 WTETQKNRF 420
>gi|241854639|ref|XP_002415963.1| GTP-binding protein hflx, putative [Ixodes scapularis]
gi|215510177|gb|EEC19630.1| GTP-binding protein hflx, putative [Ixodes scapularis]
Length = 174
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 113/171 (66%), Gaps = 6/171 (3%)
Query: 330 VDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEE 389
+DT+GFIS+IPTTL+ F TLEDA+LAD+I+HV D+S+PD Q+Q+V ETL +++ +
Sbjct: 1 MDTVGFISDIPTTLVASFASTLEDALLADVIVHVRDLSHPDAEAQRQNVMETLARIDVPK 60
Query: 390 KILEHVLVVGNKVDAVP--PGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNI 447
+LE ++ VGNK+D +P P +V L+S GTGL QL+ ++ ++K TGR +
Sbjct: 61 SLLESIVEVGNKIDLLPFLPEGKVEN----LVSCADGTGLLQLQHAIERQLIKNTGRTVV 116
Query: 448 TMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEF 498
+RV +GGSEYQWL + A DD + L+D V+T V + KF++ F
Sbjct: 117 RLRVPTGGSEYQWLFREGAFQTCSVDDRDINYSLVDAVLTPVALAKFRNHF 167
>gi|377573161|ref|ZP_09802235.1| GTP-binding protein HflX [Mobilicoccus pelagius NBRC 104925]
gi|377538196|dbj|GAB47400.1| GTP-binding protein HflX [Mobilicoccus pelagius NBRC 104925]
Length = 493
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 172/342 (50%), Gaps = 26/342 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+ + D ++ G G E L+ V + T V S L +Q
Sbjct: 97 AALAETAGSTVLAGVVQRRYRPDPATYVGSGKAEELRDIVVAEGADTVVADSQ--LAPNQ 154
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRT---------- 225
++ L+D+ +V V DR +++ IF HAK++E + Q+ +A+L YL R R
Sbjct: 155 RRALEDVVKVKVIDRTALILDIFAQHAKSKEGKAQVELAQLQYLLPRLRGWGESMSRQAG 214
Query: 226 --IEDATNMNI-----TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
+ M TK LD +R + +R KL++ + ++K R+ R+ ++ P
Sbjct: 215 GQVSGGAGMGSRGPGETKIELDRRR--INQRMAKLRREIKEMKTVRDTKRSGRRANHVPA 272
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+ GYTN GK++L+ +T +LV N LFATLD T P+ DT+GF+ +
Sbjct: 273 VAIAGYTNAGKSSLLNRITGAGALV-ENALFATLDPTIRRAETPDGREFTIADTVGFVRS 331
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+P L+E F+ TLE+ AD+++HVVD S+PD Q V + L + + +VV
Sbjct: 332 LPHELVEAFRSTLEEVADADLLLHVVDGSHPDPEGQITAVRQVLADVWDDPNDQPKEVVV 391
Query: 399 GNKVDAVPPG--ERVT--EEYDLLISATRGTGLAQLKEKVQD 436
NK D P +R+ E+Y + +SA G G+ +L+ + D
Sbjct: 392 VNKADIADPEVVDRILRHEKYSIAVSARSGAGIEELRALIAD 433
>gi|320094006|ref|ZP_08025831.1| GTP-binding protein [Actinomyces sp. oral taxon 178 str. F0338]
gi|319979050|gb|EFW10568.1| GTP-binding protein [Actinomyces sp. oral taxon 178 str. F0338]
Length = 500
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 173/348 (49%), Gaps = 28/348 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G RV+D I D ++ G G + L VR A + + L Q
Sbjct: 102 AALAETAGSRVMDGVIQRRSLPDPATYLGSGKAKELADIVR--AHEADTVIVDEELAPSQ 159
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI- 234
++ L+D+ V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 160 RRGLEDVVDAKVVDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQAG 219
Query: 235 ----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
TK LD +R + R KLK + +++ R R ++R P+
Sbjct: 220 GRVAGGAGIGSRGPGETKIELDRRR--IRARMAKLKAEIARMEPARRTQRGARRRGGVPS 277
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+ GYTN GK+TL+ LTD LV + LFATLD T + DT+GF+ N
Sbjct: 278 VAIAGYTNAGKSTLLNRLTDAGVLV-EDALFATLDPTVRRARTADGREYTLTDTVGFVRN 336
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+PT L+E F+ TLE+ AD+++HVVD ++PD + Q + V L +E +++ E L+
Sbjct: 337 LPTQLVEAFRSTLEEVGAADVLLHVVDAAHPDPVSQVEAVRAVLSGIEGADRVPE--LIA 394
Query: 399 GNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILKAT 442
NK D P + R + +SA G G+ L+ ++D++ + +
Sbjct: 395 LNKADLATPEQLAVLRTAFPGSVALSAKTGYGVGTLRAALEDLLPRPS 442
>gi|456861942|gb|EMF80528.1| GTP-binding protein HflX [Leptospira weilii serovar Topaz str.
LT2116]
Length = 557
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 159/290 (54%), Gaps = 22/290 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VVD+ I D + GKG LE + ++ + + V L Q K + D+ +
Sbjct: 193 VVDTFIQRKNRLDPSTVLGKGKLEEI--ILKAIQKHVELLVFDLELTPSQAKKISDIADI 250
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN----------IT 235
V DR +++ IF +AK+++ +LQ+ +A+L YL R ++D NM+
Sbjct: 251 KVIDRTQLILDIFARNAKSKDGKLQVELAQLKYLKGRLTELDD--NMSRLTGGIGGRGPG 308
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ + + ER +L+ L L+ +RE+ R +++R + P V +VGYTN GK+T + A
Sbjct: 309 ETKLEIGKRRVEERITRLEVELKSLRKRREINRRQRKRNELPAVGIVGYTNAGKSTFLNA 368
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT+ + L N+LFATLD TT P I+ DT+GFI ++P L FK TLE+
Sbjct: 369 LTNSEVL-SENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPELSNAFKATLEELG 427
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV--LVVGNKVD 403
+D+++HVVDVSNPDY Q + V++ L+ LE H+ + V NK+D
Sbjct: 428 DSDLLVHVVDVSNPDYKLQMEAVEKILEELE-----FSHIPMIQVFNKID 472
>gi|421076028|ref|ZP_15537030.1| GTP-binding protein, HflX [Pelosinus fermentans JBW45]
gi|392525887|gb|EIW49011.1| GTP-binding protein, HflX [Pelosinus fermentans JBW45]
Length = 599
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 189/374 (50%), Gaps = 32/374 (8%)
Query: 138 DKKSFFGKGNLE---LLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIV 194
D F G+G ++ LL+++ + + + D L QQ+ L+ + V DR ++
Sbjct: 231 DSALFIGRGKVQEISLLRQEKNAN-----LIIFDDELSPAQQRNLEKALGIKVLDRTALI 285
Query: 195 IQIFKAHAKTREARLQIAIAELPY----------LWTRYRTIEDATNMNITKGFLDSKRM 244
+ IF A++ E +LQ+ +A+L Y + +R TK +D +R
Sbjct: 286 LDIFAQRARSHEGKLQVELAQLRYNLPRLGGQGLVLSRLGGGIGTRGPGETKLEVDRRR- 344
Query: 245 VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVP 304
+ ER + + + +K QR + R +++ + PT+A+VGYTN GK+TL+ LT + L
Sbjct: 345 -IRERVNDITRQIEYIKKQRNLHRKRRETTRIPTIALVGYTNAGKSTLLNLLTASEVLA- 402
Query: 305 RNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
++LFATLD TT L N + L DT+GFI +P L+ F+ TLE+ + ADI++HVV
Sbjct: 403 EDKLFATLDPTTRNITLANGQQALITDTVGFIQKLPHQLIAAFRATLEEVVQADILLHVV 462
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTE----EYDLLIS 420
DVS+P Y +Q V + L L ++ ++ ++ + NKVD + V+ E ++IS
Sbjct: 463 DVSHPQYQEQSHAVFQVLHELNVD---IKQLITIFNKVDKIADPNSVSALLKTENSVMIS 519
Query: 421 ATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHL 480
A G G+ L +++ I +K I M + E + K +SN+ + + +
Sbjct: 520 ALHGHGIEGLLLLIENTI----KQKTIEMHLLIPYDESNVIAKLYDISNVHSTEYREDGI 575
Query: 481 LLDVVMTDVIMNKF 494
+ + ++ N F
Sbjct: 576 YVSISLSPDQTNYF 589
>gi|83942367|ref|ZP_00954828.1| GTP-binding protein HflX [Sulfitobacter sp. EE-36]
gi|83846460|gb|EAP84336.1| GTP-binding protein HflX [Sulfitobacter sp. EE-36]
Length = 412
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 189/375 (50%), Gaps = 26/375 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
LAE+ AL ++ V + I+ L + FG G +E L R V +A V V V V
Sbjct: 19 LAEAVALARALPHLDVEGANIVPLRTVSAGMLFGSGKIEEL-RLVFEEAEVELVLVDGPV 77
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
+ QQ+ L+ + V + DR ++++IF A TRE LQ+ +A L Y R R + T
Sbjct: 78 TPV-QQRNLEKAWGVKLLDRTGLILEIFSDRAATREGVLQVEMAALNY--QRTRLVRAWT 134
Query: 231 NMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +G ++S R + E+ +L++ L+K+ R + R + + FP V
Sbjct: 135 HLERQRGGLGFVGGPGETQIESDRRAIDEQLVRLRRQLDKVVKTRALHRAARAKVPFPIV 194
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL +T D ++ ++ LFATLD T +LP+ I+ DT+GFIS++
Sbjct: 195 ALVGYTNAGKSTLFNRMTGAD-VMAKDMLFATLDPTMRSLVLPDGPEIILSDTVGFISDL 253
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+ F+ TLE+ + ADII HV D+S+ + Q ++V + L L + + V
Sbjct: 254 PTELVAAFRATLEEVLAADIICHVRDISHAETESQARNVRDILTSLGVPKDT--RSFEVW 311
Query: 400 NKVDAVPPGERVTEEYD-------LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVR 452
NK+D + L ISA G GL +L+ + + + A +T+
Sbjct: 312 NKLDQLDDDRAAAVRARAQRDDSVLAISAITGEGLDELQAVIAEALQGAVREAELTLAF- 370
Query: 453 SGGSEYQWLMKHTAV 467
+ G + WL + V
Sbjct: 371 ADGKKRAWLFEQDVV 385
>gi|325263528|ref|ZP_08130262.1| GTP-binding protein HflX [Clostridium sp. D5]
gi|324031237|gb|EGB92518.1| GTP-binding protein HflX [Clostridium sp. D5]
Length = 413
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 166/309 (53%), Gaps = 17/309 (5%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG L LK +V + T + V D L Q L+ Q V DR ++++ IF A
Sbjct: 59 TYVGKGKLLELK-EVLWETEATGI-VCDDELTSVQLHNLERELQCKVIDRTLLILDIFAA 116
Query: 201 HAKTREARLQIAIAELPYLWTRYRTIEDATN--------MNITKGFLDSKRMVLMEREQK 252
A + E ++Q+ +A+L Y +R + D+ + + L+ R ++ ER K
Sbjct: 117 RAVSSEGKIQVELAQLKYRASRLVGLRDSLSRLGGGIGTRGPGEKKLEMDRRLIRERISK 176
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
LKK L +++ RE++R +++ A+VGYT+ GK+++ ALT ++ LF+TL
Sbjct: 177 LKKELREVEQHRELIRTQRKASHKKIAALVGYTSAGKSSIENALTGA-GILADAMLFSTL 235
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT L + IL DT+GFI +P L+E FK TLE+A ADIIIHVVD SNP
Sbjct: 236 DTTTRVLELDKKQEILLTDTVGFIRKLPHHLIEAFKSTLEEAKYADIIIHVVDASNPQMD 295
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAV-PPGE--RVTEEYDLLISATRGTGLAQ 429
Q V ETL+ L +E K V+ + NK D + PG EY +L SA G GL +
Sbjct: 296 SQMYVVYETLRQLGVEGK---PVITLFNKQDKLEEPGSFRDFQAEYSILTSAKTGQGLEE 352
Query: 430 LKEKVQDMI 438
LK + ++I
Sbjct: 353 LKTALLEII 361
>gi|423716770|ref|ZP_17690960.1| GTP-binding protein HflX [Bartonella tamiae Th307]
gi|395428844|gb|EJF94919.1| GTP-binding protein HflX [Bartonella tamiae Th307]
Length = 456
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 193/384 (50%), Gaps = 27/384 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VV+ +++ + + G G +E R + D + + + + QQ+ L+ +
Sbjct: 60 VVEHHTVTMNTLRPATLLGPGKVEEFSRIIE-DKEIDLAIIDRGLTPV-QQRNLEKFWNC 117
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
V DR ++++IF A T+E LQ+ +A L Y + R + T++ +G
Sbjct: 118 KVIDRTALILEIFGDRAATKEGVLQVELAHLNY--QKGRLVRSWTHLERQRGGGGFLGGP 175
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
++S R L ++ ++K+ L+ + R + R K+++ P +A+VGYTN GK+TL
Sbjct: 176 GETQIESDRRQLQDKIVRIKRELDTVVKTRALHRAKRKKTSHPVIALVGYTNAGKSTLFN 235
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT + L ++ LFATLD T LP+ ++ DT+GFISN+PT L+ F+ TLE+
Sbjct: 236 QLTGANVLA-KDMLFATLDPTLRRITLPHGQLVILSDTVGFISNLPTHLIAAFRATLEEV 294
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT-- 412
+ AD+I+HV D+S+PD+ Q V + L+ L ++ H+ + NK D + R T
Sbjct: 295 IEADLILHVRDMSDPDHYIHAQDVRDILKSLGVDIDDHNHIFEIWNKTDLLDDISRETLK 354
Query: 413 ------EEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTA 466
Y L+SA +G GL +L++ ++ I + NI ++ W+ K+
Sbjct: 355 ETARNAANYAFLVSALKGEGLLELEKAIERQISGEMIQHNIRLKAEDFAL-LDWIYKN-- 411
Query: 467 VSNIREDDTSAEHLLLDVVMTDVI 490
V NI + ++L V+T I
Sbjct: 412 VGNIERHNEDDGSIVLKFVITQEI 435
>gi|333897278|ref|YP_004471152.1| GTP-binding protein HflX [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333112543|gb|AEF17480.1| GTP-binding proten HflX [Thermoanaerobacterium xylanolyticum LX-11]
Length = 412
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 177/320 (55%), Gaps = 15/320 (4%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G VV S + D+ S+ GKG L LK + G+ V+ + V+ D L Q K ++D+
Sbjct: 38 GAEVVGVVTQSRTNIDRTSYIGKGKLMELKEFI-GNNDVSMIIVN-DELTGIQIKNIEDV 95
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-EDATNMNITKGF--- 238
V DR +++ IF AK+ E LQ+ +A+L Y R + I D + + G
Sbjct: 96 VNKKVIDRTGLILDIFAKRAKSAEGMLQVELAQLKYRLPRLQGIGNDLSRLGGGIGTRGP 155
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
L++ R + ER + ++ ++ L+ RE++R ++++ + P VA++GYTN GK+TL+
Sbjct: 156 GETKLETDRRHIKERIRAIEAKIDDLRRHRELLRGRRKKNEVPVVAIIGYTNAGKSTLMN 215
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT+ S+ ++LFATLD T + +LP+ I+ +DT+GFI +P L+E FK TLE+
Sbjct: 216 VLTNA-SVYAEDKLFATLDPTARKLILPSGREIVLIDTVGFIRKLPHDLVEAFKSTLEEL 274
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEE 414
AD+++HV+D+S D + + V+ L+ L++ K +V + +D VP + +
Sbjct: 275 KYADVLLHVIDISAKDVMHKINVVEGVLKDLDVINKPKINVYNKSDLLDKVPENKGDS-- 332
Query: 415 YDLLISATRGTGLAQLKEKV 434
+ ISA G+ +L E +
Sbjct: 333 --VYISAKERIGIDKLLEMI 350
>gi|256825566|ref|YP_003149526.1| GTP-binding proten HflX [Kytococcus sedentarius DSM 20547]
gi|256688959|gb|ACV06761.1| GTP-binding proten HflX [Kytococcus sedentarius DSM 20547]
Length = 517
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 170/322 (52%), Gaps = 31/322 (9%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G L+ V + T ++ D L Q++ L+D+ +V V DR +++ I
Sbjct: 141 DPATWMGSGKAAELRDIVAAEGADT--VIADDELAPSQRRALEDVIKVKVVDRTALILDI 198
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI-----------------TKGFLD 240
F HAK+RE R Q+ +A+L YL R R ++ + TK LD
Sbjct: 199 FAQHAKSREGRAQVELAQLQYLLPRLRGWGESMSRQAGGRVAGGEGIGSRGPGETKIELD 258
Query: 241 SKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDD 300
+R + + KL+K + ++K R+ R+ ++ + P+V + GYTN GK++L+ LT
Sbjct: 259 RRR--INTQMAKLRKQIAQMKTVRDTKRSSRKDHQVPSVVIAGYTNAGKSSLLNRLTRAG 316
Query: 301 SLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADII 360
LV NQLFATLD T + DT+GF+ ++P L+E F+ TLE+ AD++
Sbjct: 317 VLV-ENQLFATLDPTVRRTETADGRVFTLADTVGFVRSLPHQLVEAFRSTLEEVADADLV 375
Query: 361 IHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV--LVVGNKVDAVPPGERV-----TE 413
+HVVD S+PD Q V E L + L+EK + + ++V NK DA P E V TE
Sbjct: 376 LHVVDGSHPDPENQISAVREVLSEV-LDEKGADSMNEIIVINKADAADP-EVVARLLRTE 433
Query: 414 EYDLLISATRGTGLAQLKEKVQ 435
+ + +SA G G+ +L+E V+
Sbjct: 434 KRSIAVSARTGQGITELRELVE 455
>gi|340028216|ref|ZP_08664279.1| small GTP-binding protein [Paracoccus sp. TRP]
Length = 435
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 176/333 (52%), Gaps = 23/333 (6%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ +V+ P + G R + L E+ AL ++ V + + L D F KG
Sbjct: 13 RAYVIHPDL--GNARTRRAP-ELALEEAVALAHALPAIEVTGAEVARLRKPDPGMLFSKG 69
Query: 147 NLELLKRQVRGDA---RVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAK 203
E + ++ A V + V + QQ+ L+ + V + DR ++++IF A+
Sbjct: 70 KREEIGAHLQAVADGEGAELVLIDGPVTPV-QQRNLEKEWGVKILDRTGLILEIFADRAR 128
Query: 204 TREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQK 252
TRE LQ+ +A L Y R R + T++ +G +++ R + E+ +
Sbjct: 129 TREGVLQVELAALAY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDEQVVR 186
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
L++ L+++ RE+ R + + +P VA+VGYTN GK+TL LT + +V R+QLFATL
Sbjct: 187 LRRQLSRVVKTRELHRKARAKVPYPIVALVGYTNAGKSTLFNRLTGAE-VVARDQLFATL 245
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D T + LP R++ DT+GFIS++P L+ F+ TLE+ + AD+I+HV D+S+ +
Sbjct: 246 DPTMRQLTLPGERRVILSDTVGFISDLPHELVAAFRATLEEVLAADLILHVRDISHSETE 305
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAV 405
+Q V E L L +E+ + ++ V NK+DA+
Sbjct: 306 EQAADVGEILDSLGVEDDV--PLIEVWNKIDAL 336
>gi|55980535|ref|YP_143832.1| GTP-binding protein HflX [Thermus thermophilus HB8]
gi|55771948|dbj|BAD70389.1| GTP-binding protein HflX [Thermus thermophilus HB8]
Length = 503
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 164/318 (51%), Gaps = 24/318 (7%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D + G G LE LK + T +F VD L Q + ++ + + V DR +++
Sbjct: 183 SLDPRYLVGLGKLEELKSLAYHENASTLIF-GVD-LTPAQAREIERVTGLKVLDRTQLIL 240
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLM 247
IF HAKT EA+ Q+ +A+L YL R R + L+ R L
Sbjct: 241 DIFALHAKTPEAQAQVELAQLRYLLPRLVGKGKEMSRLGGGIGTRGPGETKLEVDRRRLQ 300
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
+R L + L +R+ R K++R+ P VAVVGYTN GKTTL++ALT ++
Sbjct: 301 DRIAHLSRKLQDYALRRQEARQKRKRRGVPLVAVVGYTNAGKTTLLRALTRAGE-EGEDK 359
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATL T G LP +L+ DT+GFI ++P LL F+ TLE+ AD+++HV+D S
Sbjct: 360 LFATLRPLTRRGFLPGVGEVLFTDTVGFIRHMPEELLTAFRATLEEVREADVLVHVLDAS 419
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP------GERVTEEYDLLISA 421
L++ + V + L L +E + VL + NK D P GER+ + +SA
Sbjct: 420 EEGALERHRVVRDLLLDLGVEAPV---VLAL-NKADRAAPYDLYFLGERLG---GVPVSA 472
Query: 422 TRGTGLAQLKEKVQDMIL 439
+GTGL +LKE + +L
Sbjct: 473 LKGTGLKELKEALARALL 490
>gi|420154022|ref|ZP_14660954.1| GTP-binding protein HflX [Actinomyces massiliensis F0489]
gi|394756432|gb|EJF39533.1| GTP-binding protein HflX [Actinomyces massiliensis F0489]
Length = 539
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 169/345 (48%), Gaps = 30/345 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A +S G +V+D+ I D ++ G G L V A V A V VD L
Sbjct: 134 AALSETAGSQVLDALIQKRDHPDPATYLGSGKARELAEMV---AAVGADTVIVDGELAPS 190
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ V V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 191 QRRALEDVVGVKVVDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQA 250
Query: 235 -----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
TK LD +R + R KL++ + + RE+ R ++R P
Sbjct: 251 GGRVVGGQGIGSRGPGETKIELDRRR--IRHRMAKLRREIRAMAPSREVKRGSRRRGPIP 308
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
VA+ GYTN GK++L+ LTD +V ++ LFATLD T + DT+GF+
Sbjct: 309 AVAIAGYTNAGKSSLMNRLTDAGLMV-QDALFATLDPTVRRAETADGRVYTLTDTVGFVR 367
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
N+P L+E F+ TLE+ AD+++H+VD ++PD + Q V L + + E L+
Sbjct: 368 NLPHELIEAFRSTLEEVAGADLVLHIVDAAHPDPVGQVAAVRAVLADIPGALDVPE--LI 425
Query: 398 VGNKVDAVPPGERVTEEYDLL----ISATRGTGLAQLKEKVQDMI 438
V NK+D R L ISA G G+ L+ ++ M+
Sbjct: 426 VLNKIDLTDAVTRAALRTRLPGAIEISARTGEGIEDLRARIDAML 470
>gi|392377175|ref|YP_004984334.1| putative GTP-binding protein (HflX-like) [Azospirillum brasilense
Sp245]
gi|356878656|emb|CCC99544.1| putative GTP-binding protein (HflX-like) [Azospirillum brasilense
Sp245]
Length = 419
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 179/344 (52%), Gaps = 27/344 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN- 233
QQ+ L+ +V V DR ++++IF A A+TRE LQ+ +A L Y + R + T++
Sbjct: 82 QQRNLEKALKVKVIDRTGLILEIFGARARTREGMLQVELAALTY--QKSRLVRSWTHLER 139
Query: 234 ----------ITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVG 283
+ L+ R ++ +R K+KK L +++ R + R + + +P VA+VG
Sbjct: 140 QRGGFGFLGGPGESQLEMDRRLIGDRIVKIKKELEEVRRTRGLHRKARAKVPYPVVALVG 199
Query: 284 YTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTL 343
YTN GK+TL L + D + ++ LFATLD T + LP+ +++ DT+GFIS++P L
Sbjct: 200 YTNAGKSTLFNRLANAD-VFAKDLLFATLDPTMRQVTLPSGRKVILSDTVGFISDLPHGL 258
Query: 344 LEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+ F+ TLE+ ADII+HV DVS+ D QK V E + + ++ + V+ V NK+D
Sbjct: 259 VAAFRATLEEVDAADIILHVRDVSHQDSEPQKADVHEVMSDMGIDPDADDRVIEVLNKID 318
Query: 404 AVPPGER-------VTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG-G 455
A+ R + +SA G G+A L +++ D + A R + + V G G
Sbjct: 319 ALDDESREAILAQTARNPRAVAVSALSGAGIADL-DRLLDQRMNAH-RHVVDLSVELGDG 376
Query: 456 SEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFI 499
+ WL V R+D+ A + V + + +F+ F+
Sbjct: 377 AALAWLYAKGEVLERRDDEVQAH---IQVAIDPADLARFEKRFV 417
>gi|164687577|ref|ZP_02211605.1| hypothetical protein CLOBAR_01218 [Clostridium bartlettii DSM
16795]
gi|164603351|gb|EDQ96816.1| GTP-binding protein HflX [Clostridium bartlettii DSM 16795]
Length = 428
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 184/352 (52%), Gaps = 30/352 (8%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
+AE K LV + G V+ S I + + D F GKG +E ++ VF D
Sbjct: 32 MAELKELVKA-AGAEVLASVIQNKPARDAAYFIGKGKVEEIRDYCHMLGATMIVFN--DE 88
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIE--- 227
L + ++D+ + V DR +++ IF A ++E +LQ+ +A+L Y R +
Sbjct: 89 LSGAHMRNIEDVTGLKVIDRTALILDIFAQRALSKEGKLQVELAQLKYRLPRLYGMGGQM 148
Query: 228 DATNMNI-TKGFLDSKRMV----LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
T I T+G + K V ++ R ++K L ++K RE R ++ + P VA+V
Sbjct: 149 SRTGAGIGTRGPGEQKLEVDKRHILNRAADIRKELREVKQNRETQRVQRLKSNIPIVALV 208
Query: 283 GYTNCGKTTLIKAL--------TDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIG 334
GYTN GK+TL+ L T+ + V ++ LFATLDVT + LPN+ L VDT+G
Sbjct: 209 GYTNAGKSTLLNELIKTHKDYETEKEVFV-KDMLFATLDVTLRKATLPNKRDFLVVDTVG 267
Query: 335 FISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEH 394
F+S +P L+E FK TLE+ AD+I+HV+D +N + QKQ + L+ L ++K
Sbjct: 268 FVSKLPHDLVEAFKATLEEVKYADLILHVIDATNSSFELQKQTTESVLKELGADDK---K 324
Query: 395 VLVVGNKVDA----VPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKAT 442
++V NK+D + P R E + ISA +G + L + +++ +++ T
Sbjct: 325 TIIVYNKIDRLELDIYPRNR---EDRIYISAKKGINMDILLKMIENALMEDT 373
>gi|323356745|ref|YP_004223141.1| GTPase [Microbacterium testaceum StLB037]
gi|323273116|dbj|BAJ73261.1| GTPase [Microbacterium testaceum StLB037]
Length = 505
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 171/348 (49%), Gaps = 32/348 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D + D ++ G+G E L+ V A V A V D L
Sbjct: 112 AALAETAGAVVLDGVLQRRPHPDPATYVGRGKAEELRDIV---AAVGADTVIADTELAPS 168
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R D+ +
Sbjct: 169 QRRALEDVVKVKVIDRTTVILDIFSQHAKSREGKAQVELAQLEYLLPRLRGWGDSMSRQA 228
Query: 235 ------------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
TK LD +R + + L+K L R R +++R
Sbjct: 229 GGQVGAGGAGMGSRGPGETKIELDRRR--IRTKMALLRKQLRDFAPARAAKRAERKRHTI 286
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P+VA+ GYTN GK++L+ LT LV N LFATLD T + DT+GF+
Sbjct: 287 PSVAIAGYTNAGKSSLLNRLTSAGVLV-ENALFATLDATVRRSETTDGRVYTLTDTVGFV 345
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
N+P L+E F+ TLE+ AD+I+HVVD S+PD Q V + + +E + H +
Sbjct: 346 RNLPHQLVEAFRSTLEEVGDADVILHVVDASHPDPAAQLATVRDVMGDVEAD---FGHEI 402
Query: 397 VVGNKVDAVPPGERVT----EEYDLLISATRGTGLAQLKEKVQDMILK 440
VV NK D V +R+ + +S+ G G+ +L+ +++ + +
Sbjct: 403 VVFNKADLVSDDDRLVLRGLAPHAHFVSSRTGEGIDELRAAIEEALPR 450
>gi|374704693|ref|ZP_09711563.1| GTP-binding protein HflX [Pseudomonas sp. S9]
Length = 433
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 174/318 (54%), Gaps = 30/318 (9%)
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
K G G +E L+ QV+ +F V L Q++ L+ F+ V DR +++ IF
Sbjct: 56 KYLIGSGKVEELRDQVKSAEADLVIFNHV--LTPSQERNLERAFECRVLDRTGLILDIFA 113
Query: 200 AHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLMER 249
A+T E +LQ+ +A+L +L TR + T++ KG L++ R +L R
Sbjct: 114 QRARTHEGKLQVELAQLDHLSTRL--VRGWTHLERQKGGIGLRGPGETQLETDRRLLRVR 171
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
+++K+ LNK++ QRE R +QR P+V++VGYTN GK+TL A+T+ + + +QLF
Sbjct: 172 IRQIKQKLNKVRSQREQARRGRQRADIPSVSLVGYTNAGKSTLFNAVTESE-VYAADQLF 230
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T L + I+ DT+GFI ++P L+E F+ TLE++ +D+++HV+D P
Sbjct: 231 ATLDPTLRRLDLNDFGPIVLADTVGFIRHLPHKLVEAFRATLEESSNSDLLLHVIDAHEP 290
Query: 370 DYLQQKQHVDETLQHLELEE-KILEHVLVVGNKVD---AVPPGERVTEEYD-----LLIS 420
+ + Q + V L + E ILE V NK+D V P ++ + D + +S
Sbjct: 291 ERMAQIEQVMAVLTEIGAHELPILE----VYNKLDLLEGVEP--QIQRDADGKPQRVWLS 344
Query: 421 ATRGTGLAQLKEKVQDMI 438
A G GL LK+ + +++
Sbjct: 345 ARDGRGLPLLKQAIAELL 362
>gi|167646573|ref|YP_001684236.1| GTP-binding proten HflX [Caulobacter sp. K31]
gi|167349003|gb|ABZ71738.1| GTP-binding proten HflX [Caulobacter sp. K31]
Length = 446
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 178/335 (53%), Gaps = 32/335 (9%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VV++ + L + FGKG +E + AVF D L QQ+ L+ V
Sbjct: 56 VVETMVAPLRLVTPATLFGKGKIEEFAAICEVEKIDVAVFD--DQLTPVQQRNLEKALNV 113
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
V DR ++++IF A+TRE +LQ+ +A L Y R R + T++ +G
Sbjct: 114 KVVDRTGLILEIFARRARTREGKLQVELARLDY--ERSRLVRTWTHLERQRGGTGNTGGP 171
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
++ R ++ + KLK+ L++++ R + R+++++ +PTVA+VGYTN GK+TL
Sbjct: 172 GETQIELDRRLIRDNILKLKRELDEVRRTRTLHRSQRKKAPYPTVALVGYTNAGKSTLFN 231
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT ++V ++ LFATLD T LP+ + DT+GFIS++P L+E F+ TLE+
Sbjct: 232 RLTHA-TVVAQDMLFATLDPTLRNVKLPDGRPAILSDTVGFISDLPHELVEAFRATLEEV 290
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEE 414
AD+++HV DV+NPD Q + V L L++ + + ++ V NK+D V E
Sbjct: 291 QEADVVLHVRDVANPDTDAQARDVQVVLAELKVTAEDGKTIIEVWNKIDLVD-----GEA 345
Query: 415 YDLL-----------ISATRGTGLAQLKEKVQDMI 438
++L +SA G G A+L ++V +I
Sbjct: 346 REILDGQARRLGASAVSAVTGEGCAELLKRVGTLI 380
>gi|110679965|ref|YP_682972.1| GTP-binding protein HflX [Roseobacter denitrificans OCh 114]
gi|109456081|gb|ABG32286.1| GTP-binding protein HflX, putative [Roseobacter denitrificans OCh
114]
Length = 432
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 188/375 (50%), Gaps = 26/375 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
LAE+ +L ++ VV + I+ L + FG G ++ +K+ + D + V V V
Sbjct: 39 LAEAVSLARALPELEVVGADIVPLKTVRAGMLFGSGKIDEIKKSLH-DEEIELVLVDGPV 97
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
+ QQ+ L+ + V + DR ++++IF A TRE LQ+ +A L Y R R + T
Sbjct: 98 SPV-QQRNLEKAWGVKLLDRTGLILEIFSDRAATREGVLQVEMAALSY--QRTRLVRAWT 154
Query: 231 NMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +G +++ R + ++ +L++ L K+ R + R + + +P +
Sbjct: 155 HLERQRGGLGFVGGPGETQIEADRRAIDDQLTRLRRQLEKVVKTRALHRAARAKIPYPII 214
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL LT D + ++ LFATLD T LP+ ++ DT+GFIS++
Sbjct: 215 ALVGYTNAGKSTLFNHLTGADVMA-KDMLFATLDPTMRRLRLPDGPEVILSDTVGFISDL 273
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+ F+ TLE+ + AD+I HV D+S+P+ Q + V + + L +EE +
Sbjct: 274 PTELVAAFRATLEEVLAADVICHVRDISHPETEAQAKDVQDIMTTLGVEED--RPTFELW 331
Query: 400 NKVDAVPPGE----RVTEEYD---LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVR 452
NK+D + GE R + D ISA G GL L V + +T+
Sbjct: 332 NKLDLLSEGEADAMRARADRDPSVFAISALSGEGLDGLLAAVTQTLQGKKRAATLTLSF- 390
Query: 453 SGGSEYQWLMKHTAV 467
S G + WL + V
Sbjct: 391 SEGRKRAWLFEQELV 405
>gi|227535923|ref|ZP_03965972.1| GTP-binding protein HflX [Sphingobacterium spiritivorum ATCC 33300]
gi|227244166|gb|EEI94181.1| GTP-binding protein HflX [Sphingobacterium spiritivorum ATCC 33300]
Length = 402
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 175/338 (51%), Gaps = 44/338 (13%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
DK +F G G +E +K + DA + V D L Q + +++ F+V + DR +++ I
Sbjct: 61 DKATFIGSGKMEEIKSYI--DAEEIDMVVFDDELSPSQLRNIENFFKVKILDRSNLILDI 118
Query: 198 FKAHAKTREARLQIAIAELPY-------LWTRYRTIEDATNM-NITKGFLDSKRMVLMER 249
F +HAKT +A+ Q+ +A+L Y +WT M + ++S R +++ +
Sbjct: 119 FASHAKTAQAKTQVELAQLQYILPRLTRMWTHLERQRGGIGMRGPGESQIESDRRMILNK 178
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
K+ L + Q E R K R + VA+VGYTN GK+T++ ++ D L+ N+LF
Sbjct: 179 ISLFKERLKSIDKQNETQR--KNRGEMIRVALVGYTNVGKSTIMNMISKSDVLI-ENKLF 235
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T + ++ N L L DT+GFI +P L+E FK TL++ AD++IHVVD+S+P
Sbjct: 236 ATLDTTVRKVVIDN-LPFLLSDTVGFIRKLPHHLVECFKSTLDEVREADVLIHVVDISHP 294
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG--------------------E 409
++ V+ETL+ L +K V+ V NK+DA P E
Sbjct: 295 NFEDHIHAVNETLKDLGALDK---PVITVFNKIDAYKPAVEEGDEGEERDEGEEREVTLE 351
Query: 410 RVTEEY-------DLLISATRGTGLAQLKEKVQDMILK 440
+ + + ISAT T + + K+K+ D+I++
Sbjct: 352 KFRNSWMGKNSDPAIFISATNKTNVEEFKQKLYDIIVE 389
>gi|337755594|ref|YP_004648105.1| GTP-binding protein HflX [Francisella sp. TX077308]
gi|336447199|gb|AEI36505.1| GTP-binding protein HflX [Francisella sp. TX077308]
Length = 435
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 177/322 (54%), Gaps = 32/322 (9%)
Query: 100 KMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSF-----DKKSFFGKGNLELLKRQ 154
K +R D LAE + LV + D ++ L F D K F G G +E++K
Sbjct: 21 KYRRELNAD--LAELEGLVLA------ADKVVLESLDFNHPEPDIKYFCGMGKMEMIKN- 71
Query: 155 VRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIA 214
+ D + V L Q++ ++ + + DR ++++IF AKT E +LQ+ +A
Sbjct: 72 -KRDELEADLVVFNHPLSPSQERNIEKFLECKIMDRTRLILEIFSLRAKTHEGKLQVELA 130
Query: 215 ELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQ 263
+L Y TR ++ T++ KG L+ R ++ +R +++ + L K+K
Sbjct: 131 QLNYQSTR--LVKGWTHLERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHH 188
Query: 264 REMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPN 323
R++ R+ +++ PT++ VGYTN GK+TL +T+ D L ++QLFATLD T + ++P
Sbjct: 189 RDLSRSSRKKNNIPTISFVGYTNAGKSTLFNKITNADVLA-KDQLFATLDPTLRKVIVPK 247
Query: 324 RLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQ 383
+++ DT+GFI N+P L+E F TLE+A+ +D+++HV+D ++ DY + V++ L+
Sbjct: 248 LGEVIFSDTVGFIKNLPHDLVEAFHATLEEAIESDLLVHVIDYADEDYKSYIEQVEKVLK 307
Query: 384 HLELEEKILEHVLVVGNKVDAV 405
+ + +K ++ V NK+D +
Sbjct: 308 EIGIADK---EMICVYNKIDKI 326
>gi|389691223|ref|ZP_10180116.1| GTP-binding protein HflX [Microvirga sp. WSM3557]
gi|388589466|gb|EIM29755.1| GTP-binding protein HflX [Microvirga sp. WSM3557]
Length = 464
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 197/401 (49%), Gaps = 35/401 (8%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
++ S I L S +F G G +E L +R A + V L QQ+ L+ +
Sbjct: 73 IIQSLIAPLASPRPATFIGSGKVEELAGLIR--AEDIGLVVMDCALSPVQQRNLEKAWGA 130
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
V DR ++++IF A+TRE LQ+ +A L Y + R + T++ +G
Sbjct: 131 KVIDRTGLILEIFGRRARTREGTLQVELAHLSY--QKGRLVRSWTHLERQRGGFGFLGGP 188
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+++ R ++ ER ++++ L + R + R ++R +P +A+VGYTN GK+TL
Sbjct: 189 GETQIEADRRLIQERMNRIERDLESVVKTRSLHRTSRRRVPYPIIALVGYTNAGKSTLFN 248
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
+T D L N LFATLD T+ LP+ + + DT+GFIS++PT L+ F+ TLED
Sbjct: 249 RMTQADVLA-ENMLFATLDPTSRAIELPHGEKAILSDTVGFISDLPTMLVAAFRATLEDV 307
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER---- 410
+ AD+++HV DVS+ + Q V L+ L ++ V+ V NK D + +R
Sbjct: 308 VEADVLLHVRDVSHGETEAQAGDVAVVLRELGIDPDDTRRVVEVWNKADLLSADDRERLS 367
Query: 411 ------VTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRS-GGSEYQWLMK 463
E +LISA G G+++L ++ + + GR + V G WL +
Sbjct: 368 TASHRTGEERRPILISALTGDGISELLATIEHHL--SLGRPTYEVDVAPEDGQGLAWLHE 425
Query: 464 HTAVSNIREDDTSAE--HLLLDVVMTDVIMNKFKHEFISSR 502
+T + D T+ E H +L + + +F + F +R
Sbjct: 426 NTEIL----DRTTRENGHTILQIRLVAGKEPRFLNRFPDAR 462
>gi|217967468|ref|YP_002352974.1| GTP-binding proten HflX [Dictyoglomus turgidum DSM 6724]
gi|217336567|gb|ACK42360.1| GTP-binding proten HflX [Dictyoglomus turgidum DSM 6724]
Length = 405
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 172/326 (52%), Gaps = 22/326 (6%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D SF G LE LK V + R V + D L Q + ++ + DR M+++ I
Sbjct: 43 DPASFLRSGKLEELKYLVM-EQRADLVIFNND-LSPVQLRNIEKEIPARIVDRTMLILDI 100
Query: 198 FKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMER 249
F HA+++E ++Q+ +A+L YL R R + L+ R + +R
Sbjct: 101 FAQHARSKEGKIQVELAQLEYLLPRLTGRGETLSRLGGGIGTRGPGETKLEIDRRKIRKR 160
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
LKK L ++K +RE+ R KQR P +A+VGYTN GK+TL LT + + + LF
Sbjct: 161 IHTLKKELEEIKREREVQR--KQRLNLPQIALVGYTNAGKSTLFNLLTGAN-VRAEDLLF 217
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T + N +L DT+GFI N+P LL F+ TLE+ D+I+HV+D+S+
Sbjct: 218 ATLDPTVRKVNFKNNWEVLISDTVGFIRNLPEELLTAFRATLEEIYYVDLILHVIDISDK 277
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE--RVTEEYD----LLISATR 423
D+ +Q + V+ L+ + +E+K ++ V NK+D + E + +E D + ISA
Sbjct: 278 DFRKQIEVVESILEDMGIEDKT---IIRVYNKIDLLSKEEVRYLKQELDYKPSVFISAKE 334
Query: 424 GTGLAQLKEKVQDMILKATGRKNITM 449
G G+ +LK+ + + +LK R I +
Sbjct: 335 GIGIEKLKDLIVNELLKGVRRYKINI 360
>gi|255579523|ref|XP_002530604.1| GTP-binding protein hflx, putative [Ricinus communis]
gi|223529852|gb|EEF31784.1| GTP-binding protein hflx, putative [Ricinus communis]
Length = 625
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 184/366 (50%), Gaps = 55/366 (15%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAES---------------KALVSSIQGWRVVDSTI 131
++FVVQP ++ ++ LA S KAL + +V + I
Sbjct: 66 RLFVVQPRLRPDSFLQAKLNEALCLANSLEEQRDGYFDTDFFDKALPPHV----IVQNPI 121
Query: 132 ISLLSFDKKSFFGKGNLELLKRQVRGD---ARVTAVFVSVDVLKLHQQKMLQDLFQVPVF 188
+ +FFG G + +K + V AVFV+ VL QQ+ L+ + PV
Sbjct: 122 LRSSRARADTFFGPGTVNTIKCHLNASESKGEVDAVFVN-SVLTGVQQRNLERAWGRPVL 180
Query: 189 DRYMIVIQIFKAHAKTREARLQIAIAELPY----------LWTRYRTIEDATNMNI---- 234
DR ++I+IF AHA T+EA+LQ +A L Y L RY + + I
Sbjct: 181 DRVGLIIEIFNAHAHTKEAKLQSELAALMYKKSRLVRARGLDGRYTXLLQFLRLKIEIWR 240
Query: 235 ---TKGFLDS--------KRMVLMEREQKLKKALNKLKGQREMMRNKKQR------QKFP 277
+GF+ +R ++ER L + +++ R + R ++R +
Sbjct: 241 GSGGRGFISGAGETELQLQRRRILERRNYLLSQIREVRRTRAVQRAARKRDDGLHNKGLA 300
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
TVAVVGYTN GK+T++ L++ D L ++LFATLD +LP+ ++L+ DT+GFIS
Sbjct: 301 TVAVVGYTNAGKSTMVSTLSNSD-LYSDSRLFATLDPRLKSVVLPSGRKVLFSDTVGFIS 359
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
++P L+E F+ TLE+ + AD+++HV+D + P+ + V + LQ + + ++ L+ ++
Sbjct: 360 DLPVQLVEAFRATLEEVVEADLLVHVIDSTAPNLEEHHTTVLQVLQQIGVSKEKLQSMIE 419
Query: 398 VGNKVD 403
V NK+D
Sbjct: 420 VWNKID 425
>gi|189218239|ref|YP_001938881.1| GTP-binding protein protease modulator [Methylacidiphilum
infernorum V4]
gi|189185097|gb|ACD82282.1| GTP-binding protein protease modulator [Methylacidiphilum
infernorum V4]
Length = 432
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 177/336 (52%), Gaps = 19/336 (5%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++S G +V+ + + S + GKG + + R +V+ V + ++ + Q
Sbjct: 33 AQLASSAGAVIVERLVQKMSSPTAPYYIGKGKAKEIAEICR-QKKVSFVLFNEELSPI-Q 90
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTR----YRTIEDATN 231
+ L LF V DR +++ IF AKTRE +LQI +A+L YL R + + T
Sbjct: 91 CRNLSSLFGCKVLDRTQLILDIFAQRAKTREGKLQIELAQLLYLLPRLTRLWTHLSRQTG 150
Query: 232 MNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
T+G L+ R ++E+ +LKK L ++K R + R+ +Q+ +PT +VGYTN
Sbjct: 151 GIGTRGPGETQLEVDRRRILEKIHRLKKELEEVKKTRFIQRSSRQKFPWPTACLVGYTNA 210
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GK+TL LT+ LV ++LFATLD T +I DT+GFI +P L+E F
Sbjct: 211 GKSTLFNRLTNAHVLV-EDKLFATLDPTIRLFEFSGGYKIFLSDTVGFIQKLPHHLIESF 269
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP 407
K TLE+ AD++IH+VDVS+P Q V++ L+ + I + ++V NK+D V
Sbjct: 270 KATLEEVTEADLLIHLVDVSHPWAETQINEVNKVLEQI---GAIHKPTILVWNKIDLVNT 326
Query: 408 G---ERVTEEY--DLLISATRGTGLAQLKEKVQDMI 438
+R EEY + ISA G G L K+++ +
Sbjct: 327 SGLIKRRIEEYPGSVPISAATGFGCENLLVKIEEWL 362
>gi|304404433|ref|ZP_07386094.1| GTP-binding proten HflX [Paenibacillus curdlanolyticus YK9]
gi|304346240|gb|EFM12073.1| GTP-binding proten HflX [Paenibacillus curdlanolyticus YK9]
Length = 429
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 161/312 (51%), Gaps = 17/312 (5%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D + F GKG +E L+ TA+F L Q + L++ + + DR +++ I
Sbjct: 63 DSRWFIGKGKVEELRVIAEELGATTAIFDQE--LSGAQVRNLEEALDLKIIDRTQLILDI 120
Query: 198 FKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMER 249
F AKTRE +Q+ +A+L YL R R + L++ R + +R
Sbjct: 121 FAQRAKTREGIIQVELAQLSYLLPRLSGHGKNLSRLGGGIGTRGPGESKLETDRRHIRDR 180
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
LK L ++ R++ R ++++ VA+VGYTN GK+TL++ +TD + V NQLF
Sbjct: 181 ISDLKGVLEEVVRHRKLHRERRKKAGVVQVALVGYTNAGKSTLLREMTDAEVYV-ENQLF 239
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T+ LP+ I+ DT+GFI N+P L+ F+ TLE+ AD+++HVVD S+P
Sbjct: 240 ATLDPTSRLLELPSGKEIVLTDTVGFIQNLPHDLVAAFRATLEEVCEADLVLHVVDSSSP 299
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER---VTEEYDLLISATRGTG 426
Q + VDE L L K L V NK D P ER ++ISA +
Sbjct: 300 TRADQMRVVDEVLDQLGAAGK---PTLTVYNKRDLCPSEERELLPNGGGSMVISAYDRSD 356
Query: 427 LAQLKEKVQDMI 438
L +L++ +QD +
Sbjct: 357 LDRLRQAIQDHL 368
>gi|288575669|ref|ZP_05977403.2| GTP-binding protein HflX [Neisseria mucosa ATCC 25996]
gi|288567459|gb|EFC89019.1| GTP-binding protein HflX [Neisseria mucosa ATCC 25996]
Length = 373
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 184/371 (49%), Gaps = 35/371 (9%)
Query: 98 GKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKS---FFGKGNLELLKRQ 154
G R T L E+ LV++ G V+ T DK F G G E L
Sbjct: 13 GANEVRERTFQTTLDEAAELVAAAGGELVLRETA----KRDKAHTAYFVGTGKAEELAAA 68
Query: 155 VRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIA 214
V+ AVF L Q++ L+ + Q V DR +++ IF A+++E +LQ+ +A
Sbjct: 69 VKLHDIGLAVFNHE--LTPTQERNLEKILQCRVLDRVGLILAIFAKRAQSQEGKLQVELA 126
Query: 215 ELPYLWTR----YRTIEDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREM 266
+L +L R Y ++ KG L++ R ++ ++ LKK L ++K QR
Sbjct: 127 QLNHLSGRLVRGYGHLQSQKGGIGLKGPGETQLETDRRLIGQKITALKKQLAQVKKQRAT 186
Query: 267 MRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLR 326
R + + T A+VGYTN GK++L LT D L ++QLFATLD T L +
Sbjct: 187 RRKSRMEGRLKTFAIVGYTNAGKSSLFNRLTKADVL-AKDQLFATLDTTARRLFLSHEAG 245
Query: 327 ILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLE 386
++ DT+GF+ ++P L+ F TLE+ LAD+++HVVD SNPD+ +Q V+ L+ +
Sbjct: 246 VILTDTVGFVRDLPHKLVSAFSATLEETALADVLLHVVDASNPDFERQMDDVNVVLEEIG 305
Query: 387 LEEKILEHVLVVGNKVDAVPPGERVTEEYDLL-----------ISATRGTGLAQLKEKVQ 435
E LVV NK+D +P G R E +L IS T+ GL L+E +
Sbjct: 306 AHEV---PQLVVYNKIDLLPEGVR---EAGVLRDNSGRAVGVNISVTKSLGLDALREAMI 359
Query: 436 DMILKATGRKN 446
+ L+ G+++
Sbjct: 360 ERALENGGKRS 370
>gi|415726694|ref|ZP_11470965.1| GTP-binding protein [Gardnerella vaginalis 00703Dmash]
gi|388062920|gb|EIK85519.1| GTP-binding protein [Gardnerella vaginalis 00703Dmash]
Length = 486
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 173/345 (50%), Gaps = 30/345 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLH 174
A ++ G V D + D ++ G G E+ + DA V D L
Sbjct: 92 AALAQTAGAVVCDGILQQRYRPDAATYVGSGKAREIAAVVAQHDADTIIVD---DDLPPS 148
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--- 231
Q++ L+D+ +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 149 QRRALEDVTKVKVVDRTAVILDIFAQHATSREGKAQVELAQLQYMLPRLRGWGAALSRQA 208
Query: 232 --------MNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++G ++K R + R KL+ + + R++ R ++R+ PTV
Sbjct: 209 GGRAAGEAGIGSRGPGETKIEMDRRAIRNRISKLRHDIAHMAPARDVKRESRRRKDIPTV 268
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GK+++I LT LV N LFATLD + VDT+GF+ +
Sbjct: 269 AVVGYTNAGKSSIINCLTGSQELV-ENALFATLDTAVRRAQTQDGRNYTLVDTVGFVRRL 327
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E FK TLE+ AD+I+HVVD S+PD + Q V+E L ++ E I + ++
Sbjct: 328 PTQLVEAFKSTLEEVSQADVILHVVDGSHPDPISQIDAVNEVLSKIDGVEDIPQ--IIAF 385
Query: 400 NKVDAVPPGERVTEEYD------LLISATRGTGLAQLKEKVQDMI 438
NK D + R E ++ +++SA G + L++ +++++
Sbjct: 386 NKSDMMSDATR--EHFNAIYSNAIIVSAASGENVQILRDSIEELL 428
>gi|227833308|ref|YP_002835015.1| GTP-binding protein [Corynebacterium aurimucosum ATCC 700975]
gi|262184292|ref|ZP_06043713.1| putative GTP-binding protein [Corynebacterium aurimucosum ATCC
700975]
gi|227454324|gb|ACP33077.1| putative GTP-binding protein [Corynebacterium aurimucosum ATCC
700975]
Length = 492
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 203/439 (46%), Gaps = 42/439 (9%)
Query: 22 HQVFVIQPFIKWGKKMKRNTTRDFMLAESKALVKFSDNSQDDLEESDEFKTIRDEAQTGA 81
H V + Q F + + TT D LAE A + + + TIR E T
Sbjct: 6 HDVLLAQAFGEPAPSSQEPTTGDLDLAERNAFRRVTRET-----------TIRAEDTTDG 54
Query: 82 LGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKS 141
+++ ++ + G + A ++ G VV++ D +
Sbjct: 55 YEVEYRKLRLEQVVLVGVWTEGTVAEVEATMSELAALTETAGAEVVEALYQKRDKPDPGT 114
Query: 142 FFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAH 201
+ G G + LK V T V L Q L+ V DR M+++ IF H
Sbjct: 115 YIGSGKVNELKDIVAATGADTVVCDGE--LTPGQLSALERALNTKVIDRTMLILDIFAQH 172
Query: 202 AKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------------LDSKRM 244
AK++E + Q+++A+L YL+T R N++ G +++ R
Sbjct: 173 AKSKEGKAQVSLAQLEYLYTHTRGW--GGNLSRQAGGRAGSNGGVGLRGPGETKIETDRR 230
Query: 245 VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVP 304
+ + L+K L +K RE+ R+++ P +A+ GYTN GK++LI A+T LV
Sbjct: 231 RIRTQMALLRKELKAMKTAREIKRSRRASSTIPQIAIAGYTNAGKSSLINAMTGAGVLV- 289
Query: 305 RNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
+ LFATLD TT L + ++++ DT+GF+ ++PT L+E FK TLE+ + AD+++HVV
Sbjct: 290 EDALFATLDPTTRRAELADGRQVVFTDTVGFVRHLPTQLVEAFKSTLEEVLSADLMLHVV 349
Query: 365 DVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVVGNKVDAVPP------GERVTEEYD 416
D S+P L+Q + V+ + + E E ++V+ NK+D P + +
Sbjct: 350 DGSDPFPLKQIEAVNAVIYDIVKETGEDAPPEIIVI-NKIDQADPLVLAELRHALDRDNV 408
Query: 417 LLISATRGTGLAQLKEKVQ 435
+ +SA G G+ +L +V+
Sbjct: 409 VYVSAKTGEGIDELTTRVE 427
>gi|46198506|ref|YP_004173.1| GTP-binding protein HflX [Thermus thermophilus HB27]
gi|46196128|gb|AAS80546.1| GTP-binding protein hflX [Thermus thermophilus HB27]
Length = 550
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 164/318 (51%), Gaps = 24/318 (7%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D + G G LE LK + T +F VD L Q + ++ + + V DR +++
Sbjct: 230 SLDPRYLVGLGKLEELKSLAYHENASTLIF-GVD-LTPAQAREIERVTGLKVLDRTQLIL 287
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLM 247
IF HAKT EA+ Q+ +A+L YL R R + L+ R L
Sbjct: 288 DIFALHAKTPEAQAQVELAQLRYLLPRLVGKGKEMSRLGGGIGTRGPGETKLEVDRRRLQ 347
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
+R L + L +R+ R K++R+ P VAVVGYTN GKTTL++ALT ++
Sbjct: 348 DRIAHLSRKLQDYALRRQEARQKRKRRGVPLVAVVGYTNAGKTTLLRALTRAGE-EGEDK 406
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATL T G LP +L+ DT+GFI ++P LL F+ TLE+ AD+++HV+D S
Sbjct: 407 LFATLRPLTRRGFLPGVGEVLFTDTVGFIRHMPEELLTAFRATLEEVREADVLVHVLDAS 466
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP------GERVTEEYDLLISA 421
L++ + V + L L +E + VL + NK D P GER+ + +SA
Sbjct: 467 EEGALERHRVVRDLLLDLGVEAPV---VLAL-NKADRAAPYDLYFLGERLG---GVPVSA 519
Query: 422 TRGTGLAQLKEKVQDMIL 439
+GTGL +LKE + +L
Sbjct: 520 LKGTGLKELKEALARALL 537
>gi|418677428|ref|ZP_13238704.1| GTP-binding protein HflX [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418685413|ref|ZP_13246589.1| GTP-binding protein HflX [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418741449|ref|ZP_13297823.1| GTP-binding protein HflX [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|421091506|ref|ZP_15552277.1| GTP-binding protein HflX [Leptospira kirschneri str. 200802841]
gi|400322376|gb|EJO70234.1| GTP-binding protein HflX [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|409999834|gb|EKO50519.1| GTP-binding protein HflX [Leptospira kirschneri str. 200802841]
gi|410740021|gb|EKQ84743.1| GTP-binding protein HflX [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410750897|gb|EKR07876.1| GTP-binding protein HflX [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 519
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 159/290 (54%), Gaps = 22/290 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VVD+ I D + GKG LE + ++ + + V L Q K + D+ +
Sbjct: 157 VVDTFIQRKNRLDPSTVLGKGKLEEI--ILKAIQKHVELLVFDLELTPSQAKKISDIADI 214
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN----------IT 235
V DR +++ IF +AK+R+ +LQ+ +A+L YL R ++D NM+
Sbjct: 215 KVIDRTQLILDIFARNAKSRDGKLQVELAQLKYLKGRLTELDD--NMSRLTGGIGGRGPG 272
Query: 236 KGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
+ L+ + + ER +L+ L LK +RE+ R ++++ + P V +VGYTN GK+T + A
Sbjct: 273 ETKLEIGKRRVEERITRLEVELKSLKKRREINRRQRKKNELPAVGIVGYTNAGKSTFLNA 332
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT+ + L N+LFATLD TT P I+ DT+GFI ++P L FK TLE+
Sbjct: 333 LTNSEVL-SENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPELSNAFKATLEELG 391
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV--LVVGNKVD 403
+D+++HVVDVSN DY Q + V++ L+ LE L H+ + V NK+D
Sbjct: 392 DSDLLVHVVDVSNSDYKLQMEAVEKILEELE-----LSHIPMIQVFNKID 436
>gi|415718326|ref|ZP_11467252.1| GTP-binding protein [Gardnerella vaginalis 1500E]
gi|388059890|gb|EIK82597.1| GTP-binding protein [Gardnerella vaginalis 1500E]
Length = 486
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 173/345 (50%), Gaps = 30/345 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLH 174
A ++ G V D + D ++ G G E+ + DA V D L
Sbjct: 92 AALAQTAGAVVCDGILQQRYRPDAATYVGSGKAREIAAVVAQHDADTIIVD---DDLPPS 148
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--- 231
Q++ L+D+ +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 149 QRRALEDVTKVKVVDRTAVILDIFAQHATSREGKAQVELAQLQYMLPRLRGWGAALSRQA 208
Query: 232 --------MNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++G ++K R + R KL+ + + R++ R ++R+ PTV
Sbjct: 209 GGRAAGEAGIGSRGPGETKIEMDRRAIRNRISKLRHDIAHMAPARDVKRESRRRKDIPTV 268
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GK+++I LT LV N LFATLD + VDT+GF+ +
Sbjct: 269 AVVGYTNAGKSSIINCLTGSQELV-ENALFATLDTAVRRAQTQDGRNYTLVDTVGFVRRL 327
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E FK TLE+ AD+I+HVVD S+PD + Q V+E L ++ E I + ++
Sbjct: 328 PTQLVEAFKSTLEEVSQADVILHVVDGSHPDPISQIDAVNEVLSKIDGVEDIPQ--IIAF 385
Query: 400 NKVDAVPPGERVTEEYD------LLISATRGTGLAQLKEKVQDMI 438
NK D + R E ++ +++SA G + L++ +++++
Sbjct: 386 NKSDMMSDATR--EHFNAIYSNAIIVSAASGENVQILRDSIEELL 428
>gi|386360928|ref|YP_006059173.1| GTP-binding protein HflX [Thermus thermophilus JL-18]
gi|383509955|gb|AFH39387.1| GTP-binding protein HflX [Thermus thermophilus JL-18]
Length = 550
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 164/318 (51%), Gaps = 24/318 (7%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D + G G LE LK + T +F VD L Q + ++ + + V DR +++
Sbjct: 230 SLDPRYLVGLGKLEELKSLAYHENASTLIF-GVD-LTPAQAREIERVTGLKVLDRTQLIL 287
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLM 247
IF HAKT EA+ Q+ +A+L YL R R + L+ R L
Sbjct: 288 DIFALHAKTPEAQAQVELAQLRYLLPRLVGKGKEMSRLGGGIGTRGPGETKLEVDRRRLQ 347
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
+R L + L +R+ R K++R+ P VAVVGYTN GKTTL++ALT ++
Sbjct: 348 DRIAHLSRKLQDYALRRQEARQKRKRRGVPLVAVVGYTNAGKTTLLRALTRAGE-EGEDK 406
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATL T G LP +L+ DT+GFI ++P LL F+ TLE+ AD+++HV+D S
Sbjct: 407 LFATLRPLTRRGFLPGVGEVLFTDTVGFIRHMPEELLTAFRATLEEVREADVLVHVLDAS 466
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP------GERVTEEYDLLISA 421
L++ + V + L L +E + VL + NK D P GER+ + +SA
Sbjct: 467 EEGALERHRVVRDLLLDLGVEAPV---VLAL-NKADRAAPYDLYFLGERLG---GVPVSA 519
Query: 422 TRGTGLAQLKEKVQDMIL 439
+GTGL +LKE + +L
Sbjct: 520 LKGTGLKELKEALARALL 537
>gi|116689827|ref|YP_835450.1| small GTP-binding protein [Burkholderia cenocepacia HI2424]
gi|170733166|ref|YP_001765113.1| GTP-binding proten HflX [Burkholderia cenocepacia MC0-3]
gi|206560241|ref|YP_002231005.1| putative GTP-binding protein [Burkholderia cenocepacia J2315]
gi|116647916|gb|ABK08557.1| GTP-binding protein HflX [Burkholderia cenocepacia HI2424]
gi|169816408|gb|ACA90991.1| GTP-binding proten HflX [Burkholderia cenocepacia MC0-3]
gi|198036282|emb|CAR52178.1| putative GTP-binding protein [Burkholderia cenocepacia J2315]
Length = 395
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 177/339 (52%), Gaps = 28/339 (8%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E +L++S G R + S D K F G G E L+ + DA + + L
Sbjct: 26 EELSLLASSAGARPAVTLTGRRASPDAKMFIGSGKAEELR--LACDAHNVEIVIFNHALA 83
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
QQ+ L+ V DR +++ IF A++ E +LQ+ +A+L YL TR I T++
Sbjct: 84 PAQQRNLEQALNRRVVDRTSLILDIFAQRARSHEGKLQVELAQLQYLSTRL--IRAWTHL 141
Query: 233 NITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
KG L++ R ++ ER + LK L++L+ Q R ++ R +V++V
Sbjct: 142 ERQKGGIGLRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSGTMSVSLV 201
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPT 341
GYTN GK+TL ALT + +QLFATLD T+ L + + +I+ DT+GFI +P
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAA-DQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPH 260
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
L+ F+ TLE+ + AD+++HVVD S+ L+Q + V+ L E+ + VLV NK
Sbjct: 261 QLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLH--EIGADTIRQVLVF-NK 317
Query: 402 VDAVPP----GERVT-EEYD----LLISATRGTGLAQLK 431
+DAVP G+ V +EY + +SA G GL L+
Sbjct: 318 IDAVPELAARGDAVERDEYGNISRVFLSARTGQGLDTLR 356
>gi|289706438|ref|ZP_06502796.1| GTP-binding protein HflX [Micrococcus luteus SK58]
gi|289556933|gb|EFD50266.1| GTP-binding protein HflX [Micrococcus luteus SK58]
Length = 444
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 177/345 (51%), Gaps = 31/345 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V+D I + D +F GKG + L V A A V VD L
Sbjct: 46 AALAETAGSEVLDGVIQRRATPDPATFLGKGKAQELAEIV---ALSGADTVVVDSELAPS 102
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ +V V DR +++ IF HA +RE R Q+ +A+L YL R R ++ +
Sbjct: 103 QRRALEDVVRVKVIDRTALILDIFAQHASSREGRAQVELAQLEYLLPRLRGWGESMSRQA 162
Query: 235 -----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
TK LD +R + R KL++ + +K RE R ++R + P
Sbjct: 163 GGRAAAGEGIGSRGPGETKIELDRRR--IRTRMAKLRRDIAGMKPAREAKRANRRRNRVP 220
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+VA+ GYTN GK++L+ LT LV N LFATLD T + M P+ + DT+GF+
Sbjct: 221 SVAIAGYTNAGKSSLLNRLTHAGVLV-ENALFATLDPTVRKAMTPDGIGYTLSDTVGFVR 279
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
N+PT L+E F+ TLE+ AD+I+HVVD S+PD Q V ++ +I E ++
Sbjct: 280 NLPTQLVEAFRSTLEEVADADVILHVVDGSHPDPEGQIAAVRSVFAEVD-AHRIPE--II 336
Query: 398 VGNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMI 438
V NK DA P R E + +++SA G G+ +L+ + I
Sbjct: 337 VLNKADAADPAVVARIRSKEPHAVVVSARTGEGIDELERAIAATI 381
>gi|254504147|ref|ZP_05116298.1| GTP-binding proten HflX [Labrenzia alexandrii DFL-11]
gi|222440218|gb|EEE46897.1| GTP-binding proten HflX [Labrenzia alexandrii DFL-11]
Length = 431
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 221/440 (50%), Gaps = 48/440 (10%)
Query: 89 FVVQPFIKWGKK-----MKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFF 143
+++P I+ + ++ N + + L E+ L ++I +V S ++ + + + F
Sbjct: 1 MILEPIIQLRSENSQADLRSNRSPEARLDEAIGLSAAIN-LDIVHSGVVRINNPKPATLF 59
Query: 144 GKGNLELLKRQVRGDARVTAVFVSVDV--------LKLHQQKMLQDLFQVPVFDRYMIVI 195
G+G + A + + S D+ L QQ+ L+ + V DR +++
Sbjct: 60 GEGKV----------AELAGIVASEDLDLVVIDHPLSPVQQRNLERRLKTKVIDRTGLIL 109
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRM 244
+IF A+T+E +LQ+ +A L W + R + T++ +G +++ R
Sbjct: 110 EIFGDRARTKEGKLQVDLAHL--TWQKSRLVRSWTHLERQRGGAGFMGGPGETQIEADRR 167
Query: 245 VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVP 304
+ ER L+K L ++ RE+ R K+++ P VA+VGYTN GK+TL LT+ + +
Sbjct: 168 QIQERIIALQKQLESVRRTRELHRKKRKKIPQPVVALVGYTNAGKSTLFNRLTESE-VFA 226
Query: 305 RNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
++ LFATLD T + LP+ I+ DT+GFIS++PT L+ F+ TLE+ + AD+I+HV
Sbjct: 227 KDLLFATLDPTLRKITLPHGREIILSDTVGFISDLPTHLVAAFRATLEEVLEADLILHVR 286
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER---VTEEY---DLL 418
D+S+ D Q + V +TL+ L ++ ++ V NK+D + R ++EE +
Sbjct: 287 DISHADTDAQAEDVQKTLEELGVDALTGAPIIEVWNKIDLLDKDYRAKLLSEEQGEGPVA 346
Query: 419 ISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAE 478
+SA G G+ L +V + R + + VR +E + K ++ + E E
Sbjct: 347 LSAVTGEGIEHLSARVDSFM----ARHDDILSVRVPVAEGALIAKLYQMAEVLERSDGEE 402
Query: 479 HLLLDVVMTDVIMNKFKHEF 498
+++ +V ++D F+ F
Sbjct: 403 YVIAEVRVSDKQRGPFRDLF 422
>gi|444357831|ref|ZP_21159315.1| GTP-binding protein HflX [Burkholderia cenocepacia BC7]
gi|444371757|ref|ZP_21171290.1| GTP-binding protein HflX [Burkholderia cenocepacia K56-2Valvano]
gi|443594656|gb|ELT63291.1| GTP-binding protein HflX [Burkholderia cenocepacia K56-2Valvano]
gi|443605521|gb|ELT73369.1| GTP-binding protein HflX [Burkholderia cenocepacia BC7]
Length = 390
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 177/339 (52%), Gaps = 28/339 (8%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E +L++S G R + S D K F G G E L+ + DA + + L
Sbjct: 21 EELSLLASSAGARPAVTLTGRRASPDAKMFIGSGKAEELR--LACDAHNVEIVIFNHALA 78
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
QQ+ L+ V DR +++ IF A++ E +LQ+ +A+L YL TR I T++
Sbjct: 79 PAQQRNLEQALNRRVVDRTSLILDIFAQRARSHEGKLQVELAQLQYLSTRL--IRAWTHL 136
Query: 233 NITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
KG L++ R ++ ER + LK L++L+ Q R ++ R +V++V
Sbjct: 137 ERQKGGIGLRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSGTMSVSLV 196
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPT 341
GYTN GK+TL ALT + +QLFATLD T+ L + + +I+ DT+GFI +P
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAA-DQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPH 255
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
L+ F+ TLE+ + AD+++HVVD S+ L+Q + V+ L E+ + VLV NK
Sbjct: 256 QLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLH--EIGADTIRQVLVF-NK 312
Query: 402 VDAVPP----GERVT-EEYD----LLISATRGTGLAQLK 431
+DAVP G+ V +EY + +SA G GL L+
Sbjct: 313 IDAVPELAARGDAVERDEYGNISRVFLSARTGQGLDTLR 351
>gi|220904152|ref|YP_002479464.1| GTP-binding proten HflX [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868451|gb|ACL48786.1| GTP-binding proten HflX [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 561
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 173/340 (50%), Gaps = 26/340 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKG---NLELLKRQVRGDARVTAVF-VSVDVL 171
A ++ G + + + + + G+G LE+L Q R D T VF +
Sbjct: 217 AELARTAGLAIAGRMVQRVPQVNPRLIMGRGKVAELEVLTLQGRAD---TLVFDGELSPA 273
Query: 172 KLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY-------- 223
+LH L D+ + V DR +++ IF HA +R +LQ+ +A+L Y R
Sbjct: 274 QLHN---LADITERKVIDRTQLILDIFAQHAVSRAGKLQVELAQLRYTQPRLVGKNRAMD 330
Query: 224 RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVG 283
R + + L++ R + ER +++K L +L+ QR R+++ RQ P A+VG
Sbjct: 331 RLMGGIGGRGPGETKLETDRRKIRERMARIRKDLERLRRQRAFTRDRRSRQGIPLAALVG 390
Query: 284 YTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTL 343
YTN GK+TL+ LT + LV N+LFATLD TT P ++ DT+GFI N+P L
Sbjct: 391 YTNAGKSTLLNTLTRSEVLV-ENKLFATLDPTTRRLRFPAEKELILADTVGFIRNLPKEL 449
Query: 344 LEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
++ F+ TLE+ A +++HV D S+PD LQQ V+ L +EL+ + +L++ NK D
Sbjct: 450 MDAFRATLEELEAAHLLLHVADASHPDLLQQISAVETILAEMELDR--MPRLLIL-NKWD 506
Query: 404 AVPPGERV----TEEYDLLISATRGTGLAQLKEKVQDMIL 439
+ R + L ++A G G L E+++ +L
Sbjct: 507 QLEAPARAELADAFPHALPVAAKTGEGCKPLLEQLEMRLL 546
>gi|349610147|ref|ZP_08889506.1| GTP-binding protein HflX [Neisseria sp. GT4A_CT1]
gi|348610709|gb|EGY60394.1| GTP-binding protein HflX [Neisseria sp. GT4A_CT1]
Length = 396
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/368 (31%), Positives = 182/368 (49%), Gaps = 29/368 (7%)
Query: 98 GKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKS---FFGKGNLELLKRQ 154
G R T L E+ LV++ G V+ T DK F G G E L
Sbjct: 32 GANEVRERTFQTTLDEAAELVAAAGGELVLRETA----KRDKAHTAYFVGTGKAEELAAA 87
Query: 155 VRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIA 214
V+ AVF L Q++ L+ + Q V DR +++ IF A+++E +LQ+ +A
Sbjct: 88 VKLHDIGLAVFNHE--LTPTQERNLEKILQCRVLDRVGLILAIFAKRAQSQEGKLQVELA 145
Query: 215 ELPYLWTR----YRTIEDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREM 266
+L +L R Y ++ KG L++ R ++ ++ LKK L ++K QR
Sbjct: 146 QLNHLSGRLVRGYGHLQSQKGGIGLKGPGETQLETDRRLIGQKITALKKQLAQVKKQRAT 205
Query: 267 MRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLR 326
R + + T A+VGYTN GK++L LT D L ++QLFATLD T L +
Sbjct: 206 RRKSRMEGRLKTFAIVGYTNAGKSSLFNRLTKADVLA-KDQLFATLDTTARRLFLSHEAG 264
Query: 327 ILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLE 386
++ DT+GF+ ++P L+ F TLE+ LAD+++HVVD SNPD+ +Q V+ L+ +
Sbjct: 265 VILTDTVGFVRDLPHKLVSAFSATLEETALADVLLHVVDASNPDFERQMDDVNVVLEEIG 324
Query: 387 LEEKILEHVLVVGNKVDAVPPGERVT--------EEYDLLISATRGTGLAQLKEKVQDMI 438
E LVV NK+D +P G R + IS T+ GL L+E + +
Sbjct: 325 AHEV---PQLVVYNKIDLLPEGVRGAGVLRDNSGRAVGVNISVTKSLGLDALREAMIERA 381
Query: 439 LKATGRKN 446
L+ G+++
Sbjct: 382 LENGGKRS 389
>gi|220926315|ref|YP_002501617.1| GTP-binding proten HflX [Methylobacterium nodulans ORS 2060]
gi|219950922|gb|ACL61314.1| GTP-binding proten HflX [Methylobacterium nodulans ORS 2060]
Length = 471
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 217/441 (49%), Gaps = 35/441 (7%)
Query: 80 GALGTDHQVFVVQPF-IKWGKKMKR---NTTRDFMLAESKALVSSIQGWRVVDSTIISLL 135
G + + + VV P+ + G + R + L E+ L ++I VVD ++ +
Sbjct: 25 GTIAAETRTLVVGPYPARRGAEAARPGAGRPPEARLDEAVGLAAAID-LDVVDHLMLPVQ 83
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIV 194
+ ++ GKG +E + ++ + + V +D L QQ+ L+ + V V DR ++
Sbjct: 84 AIRPSTYLGKGRVEEIAGRIAAE---SVRLVVMDCALSPVQQRNLEKAWGVKVIDRTGLI 140
Query: 195 IQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKR 243
++IF A TRE LQ+ A L Y R R + T++ +G +++ R
Sbjct: 141 LEIFGRRASTREGALQVEHAHLAY--QRSRLVRSWTHLERQRGGFGFLGGPGETQIEADR 198
Query: 244 MVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLV 303
++ ER ++++ L + R + R ++R +P VA+VGYTN GK+TL LT + +
Sbjct: 199 RLIQERMTRIERELETVTRTRGLHRQSRRRVPYPVVALVGYTNAGKSTLFNRLTAAE-VR 257
Query: 304 PRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHV 363
+ LFATLD T LP+ + DT+GFIS++PT L+ F+ TLED + AD ++HV
Sbjct: 258 AEDLLFATLDPTARAIKLPHGETAILSDTVGFISDLPTMLIAAFRATLEDVIEADFLLHV 317
Query: 364 VDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV--PPGERV------TEEY 415
D+++ D Q Q V L L + + + ++ V NK D + P ER+
Sbjct: 318 RDMAHEDTQAQGQDVQAVLAELGIAPET-DRIIEVWNKADLLDAPERERLLNLSRQAGAK 376
Query: 416 DLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDT 475
+LISA G G +L +++ I ++ + + + G+ WL ++ V + RED
Sbjct: 377 PVLISALTGEGTDRLLARIEARIAESRASFALVLEP-TEGAGLHWLYENAEVLDRREDAG 435
Query: 476 SAEHLLLDVVM--TDVIMNKF 494
HL++ + ++N+F
Sbjct: 436 GQLHLVVRIAPEKEPRLLNRF 456
>gi|229490877|ref|ZP_04384712.1| GTP-binding protein HflX [Rhodococcus erythropolis SK121]
gi|453072475|ref|ZP_21975601.1| GTP-binding protein HflX [Rhodococcus qingshengii BKS 20-40]
gi|226185370|dbj|BAH33474.1| putative GTP-binding protein HflX [Rhodococcus erythropolis PR4]
gi|229322267|gb|EEN88053.1| GTP-binding protein HflX [Rhodococcus erythropolis SK121]
gi|452757938|gb|EME16339.1| GTP-binding protein HflX [Rhodococcus qingshengii BKS 20-40]
Length = 491
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 171/325 (52%), Gaps = 27/325 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G + L+ V T V L Q L+ + +V V DR +++ I
Sbjct: 115 DAATYIGSGKAQELREVVLATGADT--VVCDGELTPAQLTALEKIVKVKVIDRTALILDI 172
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HA +RE + Q+A A++ Y+ R R ++ N G +++
Sbjct: 173 FAQHATSREGKAQVAFAQMEYMLPRLRGWGESMSRQAGGRAGSNGGVGLRGPGETKIETD 232
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R + ER KL++ + +K R+ R ++ + P++A+VGYTN GK++L+ +LT L
Sbjct: 233 RRRIRERMAKLRREIKGMKAARDTKRTRRLQSDIPSIAIVGYTNAGKSSLLNSLTGSGVL 292
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V N LFATLD TT L + + DT+GF+ ++PT L+E F+ TLE+ AD+++H
Sbjct: 293 V-ENALFATLDPTTRRAALDDGREYVLTDTVGFVRHLPTQLVEAFRSTLEEVTDADLLLH 351
Query: 363 VVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVVGNKVDAVPPGERVTEEYDLL-- 418
VVD S+P +Q + V E + + E + K ++VV NK+DA P +T+ LL
Sbjct: 352 VVDGSDPLPTEQIKAVREVVTDVLRETDSKAPPELIVV-NKIDAADP-VTLTQLRGLLPG 409
Query: 419 ---ISATRGTGLAQLKEKVQDMILK 440
+SA G G+A+L+ + +++++
Sbjct: 410 AVFVSARTGEGIAELRAHLSEVLVR 434
>gi|270158385|ref|ZP_06187042.1| GTP-binding protein HflX [Legionella longbeachae D-4968]
gi|289163370|ref|YP_003453508.1| GTPase [Legionella longbeachae NSW150]
gi|269990410|gb|EEZ96664.1| GTP-binding protein HflX [Legionella longbeachae D-4968]
gi|288856543|emb|CBJ10338.1| putative GTPase [Legionella longbeachae NSW150]
Length = 419
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 186/345 (53%), Gaps = 34/345 (9%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVR-GDARVTAVFVSVDVLKLHQQKMLQDLFQ 184
V++ + + + D K + G+G E + + V+ DA + V V+ + L Q++ L+ L +
Sbjct: 41 VLECVLGTRATPDAKYYIGQGKAEEIAQLVKTCDAEL--VLVNHE-LSPSQERNLERLLE 97
Query: 185 VPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------ 238
V DR +++ IF A+T E +LQ+ +A+L +L TR I T++ KG
Sbjct: 98 CRVVDRSGLILDIFAQRARTFEGKLQVELAQLQHLSTRL--IRGWTHLERQKGGIGLRGP 155
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
L++ R +L +R + + K L K++ R+ R +++ TV++VGYTN GK+TL
Sbjct: 156 GETQLETDRRLLRDRIKYINKRLEKVRSSRDQNRQARRKASLRTVSLVGYTNAGKSTLFN 215
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
ALT + S+ NQLFATLD T + LP ++ DT+GFI ++P L+E F+ TLE+
Sbjct: 216 ALTGE-SIYVANQLFATLDPTMRQLNLPGSSSVIVTDTVGFIRDLPHHLVEAFRATLEET 274
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA----VPPGER 410
AD+++HV+D+S+P + V + L LE+ + ++ V NK+D P +
Sbjct: 275 QQADLLLHVIDISDPHWRDNVFSVQQVLDELEVHDV---PIIQVFNKIDLKEGWEPKIDY 331
Query: 411 VTEEYDLLISATRGTGLAQLKEKV----------QDMILKATGRK 445
E+ + +SA GL LKE + ++++LKAT K
Sbjct: 332 QEEKCKVWLSAASNLGLDLLKEAISTQLHGAISTEEVVLKATQAK 376
>gi|390556625|ref|ZP_10243046.1| putative GTP-binding protein ynbA [Nitrolancetus hollandicus Lb]
gi|390174793|emb|CCF82329.1| putative GTP-binding protein ynbA [Nitrolancetus hollandicus Lb]
Length = 463
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 181/344 (52%), Gaps = 25/344 (7%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E A ++ G VV S +L + + G G L +K ++R R V V D L
Sbjct: 61 EELAQLAETAGLDVVGSITQALPHPNHAHYVGSGKLNEIK-ELRESLRYDVVLVD-DELP 118
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
Q + L++ +V V DR +++ IF A+T E RLQ+ +A+L Y R + +
Sbjct: 119 PAQLRNLEEALEVKVIDRTALILDIFARRAQTHEGRLQVELAQLEYRLPRLTRMWTHLSR 178
Query: 233 NITKGF---------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVG 283
G L++ R +R +K+ L+++ R++ R ++Q++ P VA+VG
Sbjct: 179 QAVGGVGLRGPGETQLEADRRQARQRIAFIKQQLDEVHRHRQLYRERRQKENIPIVALVG 238
Query: 284 YTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTL 343
YTN GK+TL+ L S++ ++LFATLD TT LP +L DT+GFI+ +PT L
Sbjct: 239 YTNAGKSTLLNTLAGA-SVLAEDKLFATLDPTTRRIELPGGHHVLVTDTVGFINKLPTLL 297
Query: 344 LEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+ F+ TLE+ + A +++HV+DV++P +Q + V + ++ L +++ V+ NK+D
Sbjct: 298 IAAFRATLEEILEAAVLVHVLDVTHPKSAEQAETVRQVIEELGADDR---PVITALNKID 354
Query: 404 ----AVPPGERVTE-----EYDLLISATRGTGLAQLKEKVQDMI 438
A+ P + E +Y + ISA G GL L +V++++
Sbjct: 355 RLNGALTPDQLAAELGLSPDY-VPISAQTGNGLDLLLSRVEEVL 397
>gi|87311874|ref|ZP_01093986.1| GTP-binding protein Hflx [Blastopirellula marina DSM 3645]
gi|87285405|gb|EAQ77327.1| GTP-binding protein Hflx [Blastopirellula marina DSM 3645]
Length = 442
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 169/314 (53%), Gaps = 21/314 (6%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ G G +E LK + +A V + + L Q + L+ + V DR +++ IF
Sbjct: 61 TYLGSGKVEELK--LCAEASEANVIIFDNELSPAQTRNLEQGTGLKVIDRTELILDIFAT 118
Query: 201 HAKTREARLQIAIAELPY-------LWTRYRTIEDATNM-NITKGFLDSKRMVLMEREQK 252
HA+T E+RL + +A+L Y +W+ I+ M + L+ R ++ +R +
Sbjct: 119 HAQTYESRLAVELAQLQYALPRLKRMWSHLDRIKMGVGMRGPGEKQLEVDRRLVEKRIRD 178
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
LK L K++G+RE R R+ T+++VGYTN GK+TL+ LT+ L ++LFATL
Sbjct: 179 LKDDLAKVQGRRE--REVASRRNVMTISIVGYTNAGKSTLMNYLTEAQVLA-EDKLFATL 235
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D T LP+ +L DT+GFI N+P L+ FK TLE+A AD+++HV D SN D +
Sbjct: 236 DTRTRRWQLPHWGPVLLSDTVGFIRNLPHRLIASFKATLEEARQADLLLHVADASNADVV 295
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG---ERVTEEYD--LLISATRGTGL 427
Q V E L+ + +EEK L+V NK+DAV E + + Y LL+SA G G
Sbjct: 296 NQISAVYEVLEEIGIEEK---DALLVLNKIDAVTDQHTLEVLLQRYPDALLVSAKTGEGR 352
Query: 428 AQLKEKVQDMILKA 441
+ V D + ++
Sbjct: 353 EKFALAVSDALSRS 366
>gi|403713513|ref|ZP_10939613.1| GTP-binding protein HflX [Kineosphaera limosa NBRC 100340]
gi|403212277|dbj|GAB94296.1| GTP-binding protein HflX [Kineosphaera limosa NBRC 100340]
Length = 495
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 177/355 (49%), Gaps = 33/355 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+ + L D ++ G G E L+ V + T V S L Q
Sbjct: 98 AALAETAGSTVLAGVLQRRLRPDPATYLGSGKAEELRDIVADEGADTVVCDSE--LAPSQ 155
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI- 234
++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 156 RRALEDVVKVKVIDRTALILDIFAQHAKSREGKAQVELAQLQYLLPRLRGWGESMSRQAG 215
Query: 235 ----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
TK LD +R + + KL++ + +K R+ R+ + K P
Sbjct: 216 GRVAGGEGIGSRGPGETKIELDRRR--INTKIAKLRREIRGMKKTRDTKRSARHANKVPA 273
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+ GYTN GK++L+ LT LV N LFATLD T + DT+GF+ +
Sbjct: 274 VAIAGYTNAGKSSLLNRLTGAGVLV-ENALFATLDPTVRRAQTQDGRDYTLADTVGFVRS 332
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+PT L+E F+ TLE+ +D+++HVVD S+PD Q V L +E + + ++VV
Sbjct: 333 LPTQLVEAFRSTLEEVADSDLLLHVVDGSHPDPEGQISAVRAVLADVEATD--VPEIIVV 390
Query: 399 GNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITM 449
NK DA P R E+ +++SA G GL +L+ D+I A + +I M
Sbjct: 391 -NKADAADPEVLDRLRRHEKGAVIVSARTGAGLDELR----DIIDAALPKPHIPM 440
>gi|395791091|ref|ZP_10470549.1| GTP-binding protein HflX [Bartonella alsatica IBS 382]
gi|395408454|gb|EJF75064.1| GTP-binding protein HflX [Bartonella alsatica IBS 382]
Length = 447
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 174/334 (52%), Gaps = 24/334 (7%)
Query: 125 RVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQ 184
++V + +++ + FGKG E L + + + V V + + QQ+ L+ L+
Sbjct: 59 KIVHYETVKIVTLRPATLFGKGKAEALAHYI-SEYNIELVIVDYFLTPV-QQRNLEKLWN 116
Query: 185 VPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------ 238
V DR ++++IF A A+T+E LQ+ +A L Y + R + T++ +G
Sbjct: 117 CKVIDRTALILEIFGARARTKEGILQVQLAHLSY--QKSRLVRSWTHLERQRGGRGFLGG 174
Query: 239 -----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLI 293
+++ R +L E+ +++ L + R + R K+++ P VA+VGYTN GK+TL
Sbjct: 175 PGETQIEADRRLLQEKIICIRRELETVIKTRALHRAKRKKTSHPVVALVGYTNTGKSTLF 234
Query: 294 KALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLED 353
L+ D L ++ LFATLD T + +LP+ IL DT+GFISN+PT L+ F+ TLE+
Sbjct: 235 NRLSGADVLA-KDMLFATLDPTLRKVILPHGKTILLSDTVGFISNLPTHLIAAFRATLEE 293
Query: 354 AMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD--------AV 405
+ AD+I+HV D+S+ D+ + V E L L + EH++ V NK+D +
Sbjct: 294 VVEADLILHVRDMSDSDHYAHAKDVLEVLSGLGININDTEHIIEVWNKIDLLDEQTLNVL 353
Query: 406 PPGERVTEEYDLLISATRGTGLAQLKEKVQDMIL 439
+ +++SA GL QL ++ I
Sbjct: 354 KTSAKTRLNPAIMVSALMSNGLDQLLTTIEKRIF 387
>gi|359688502|ref|ZP_09258503.1| GTP-binding protein [Leptospira licerasiae serovar Varillal str.
MMD0835]
gi|418748323|ref|ZP_13304615.1| GTP-binding protein HflX [Leptospira licerasiae str. MMD4847]
gi|418756019|ref|ZP_13312207.1| GTP-binding protein HflX [Leptospira licerasiae serovar Varillal
str. VAR 010]
gi|384115690|gb|EIE01947.1| GTP-binding protein HflX [Leptospira licerasiae serovar Varillal
str. VAR 010]
gi|404275392|gb|EJZ42706.1| GTP-binding protein HflX [Leptospira licerasiae str. MMD4847]
Length = 541
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 182/331 (54%), Gaps = 23/331 (6%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G VVDS I D + GKG LE + ++ + + V L Q K + D
Sbjct: 190 GVHVVDSFIQRKNRLDPSTVLGKGKLEEI--VLKAIQKQVELLVFDLELTPSQAKKISDY 247
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN--------- 233
+ V DR +++ IF +A +R+ +LQ+ +A+L YL R ++D NM+
Sbjct: 248 ADLKVLDRTQLILDIFARNATSRDGKLQVELAQLKYLKGRLSELDD--NMSRLTGGIGGR 305
Query: 234 -ITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTL 292
+ L+ + + ER +L++ L LK +RE+ R ++++ + P +VGYTN GK+TL
Sbjct: 306 GPGETKLEIGKRRVEERISRLEQELKSLKKRREIARRRRKKNEIPVCGIVGYTNAGKSTL 365
Query: 293 IKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLE 352
+ A+T+ S++ ++LFATLD T+ P I+ DT+GFI ++P L FK TLE
Sbjct: 366 LNAMTNS-SVLSEDKLFATLDPTSRRIRFPEEREIIISDTVGFIHDLPPELSNAFKATLE 424
Query: 353 DAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER-- 410
+ +D+++HVVDVSNP++ QQ + V+ L+ L L + + +LV NK+D +P R
Sbjct: 425 ELGDSDLLVHVVDVSNPEFRQQMEAVETILEDLNLSD--IPRILVF-NKIDGLPEEARNE 481
Query: 411 VTEEYDL---LISATRGTGLAQLKEKVQDMI 438
+ E DL +SAT+G GL L ++++ I
Sbjct: 482 LLREADLDTIYVSATKGFGLNTLLNRIEERI 512
>gi|444432051|ref|ZP_21227211.1| GTP-binding protein HflX [Gordonia soli NBRC 108243]
gi|443887225|dbj|GAC68932.1| GTP-binding protein HflX [Gordonia soli NBRC 108243]
Length = 516
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 185/355 (52%), Gaps = 29/355 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G +V+D+ I D ++ G G + L+ V T + L Q
Sbjct: 120 AALAETAGSQVLDALIQRRSKPDSATYIGSGKADELREVVLATGADT--VICDGELTPAQ 177
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA------ 229
L+ + +V V DR +++ IF HA +RE + Q+++A++ Y+ R R ++
Sbjct: 178 LTALEKIVKVKVIDRTALILDIFAQHATSREGKAQVSLAQMEYMLPRLRGWGESMSRQAG 237
Query: 230 --TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
N G +++ R + ER KL++ + +K R +MR+ +++ P +
Sbjct: 238 GRAGSNGGVGLRGPGETKIETDRRRIRERMSKLRREIRAMKKSRVVMRSARRQSSVPALT 297
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
V GYTN GK++L+ A+T LV ++ LFATLD TT L + +++ DT+GF+ ++P
Sbjct: 298 VAGYTNAGKSSLVNAMTGSGVLV-QDALFATLDPTTRRATLDDGREVVFTDTVGFVRHLP 356
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV-LVVG 399
T L+E F+ TLE+ + AD+++HVVD S+ L+Q V + + +E L+V
Sbjct: 357 TQLVEAFRSTLEEVVDADLVLHVVDGSDEFPLEQISAVRRVINEVVADEGAAPPPELLVI 416
Query: 400 NKVDAVPPGERVTE-----EYDLLISATRGTGLAQLKEKVQDMILKATGRKNITM 449
NK+DAV R+TE + + +SA G GL +L +++++ + GR ++ +
Sbjct: 417 NKIDAVDE-LRLTELRGALDGAVFVSAQTGEGLPELFDRIREFV----GRSDVEL 466
>gi|326384487|ref|ZP_08206167.1| GTP-binding proten HflX [Gordonia neofelifaecis NRRL B-59395]
gi|326196832|gb|EGD54026.1| GTP-binding proten HflX [Gordonia neofelifaecis NRRL B-59395]
Length = 499
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 159/300 (53%), Gaps = 21/300 (7%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G +V+++ I D ++ G G E L+ V T + L Q L+ +
Sbjct: 108 GSQVLEALIQRRSKPDSATYLGSGKAEELREVVLATGADT--VICDGELTPAQLTALEKV 165
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNI 234
+V V DR +++ IF HA +RE + Q+A+A++ Y+ R R ++ N
Sbjct: 166 VKVKVIDRTALILDIFAQHATSREGKAQVALAQMEYMLPRLRGWGESMSRQAGGRAGSNG 225
Query: 235 TKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
G +++ R + ER KL+K + +K R + R ++R P + VVGYTN
Sbjct: 226 GVGLRGPGETKIETDRRRIRERMAKLRKEIRGMKTARSVKRAARRRGGVPALTVVGYTNA 285
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GK++L+ A+T LV ++ LFATLD TT L + +++ DT+GF+ ++PT L+E F
Sbjct: 286 GKSSLVNAMTGSGVLV-QDALFATLDPTTRRAQLADGHEVVFTDTVGFVRHLPTQLVEAF 344
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEK--ILEHVLVVGNKVDAV 405
+ TLE+A+ AD+++HVVD ++P Q V + L + EEK +LV+ NK+DAV
Sbjct: 345 RSTLEEAVDADLLVHVVDGADPFPANQISAVRQVLGDVLAEEKRPAPPEMLVI-NKIDAV 403
>gi|15606930|ref|NP_214311.1| GTP-binding protein HflX [Aquifex aeolicus VF5]
gi|2984170|gb|AAC07703.1| GTP-binding protein HflX [Aquifex aeolicus VF5]
Length = 370
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 193/363 (53%), Gaps = 37/363 (10%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSF-DKKSFFGKGNLELLKRQV 155
WG+ + + +++ + E K LV ++ G + I+ +F D+K + G+G + ++ V
Sbjct: 9 WGRDISKEFSKE-SIKELKGLVEAVGGKTL--GYILQKRNFPDQKYYIGQGKAQEIREIV 65
Query: 156 RGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIA- 214
RG T VF D L Q L+ + V DR +V++IF AKT+EA+LQ+ +A
Sbjct: 66 RGTKADTVVFD--DFLTPAQISNLEKVINAKVLDRTDLVLEIFSRRAKTKEAKLQVELAK 123
Query: 215 ---ELPYLWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKK 271
ELP L + + + T+G + + V R++ +KK ++++K + E ++ ++
Sbjct: 124 LMHELPRLHGKGKALSRLGGGLGTRGPGEQETEV---RKRLIKKRIHRIKKELEEIKKRR 180
Query: 272 -----------QRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGM 320
+ ++ VA+VGYTN GK+TL+ ALT D+ V N LFATLD T +
Sbjct: 181 REQRKRRERSEKGERIVRVAIVGYTNAGKSTLMNALTKKDTYVA-NMLFATLDTKTSARV 239
Query: 321 LPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDE 380
+ ++L+ DT+GFI +P L+E FK TLE+ ADII+HVVDVS+ +L V+E
Sbjct: 240 IYPDFKLLFTDTVGFIRKLPPELIESFKATLEEVQEADIILHVVDVSDEGWLDYVSTVNE 299
Query: 381 TLQHLELEEKILEHVLVVGNKVDAVP---------PGERVTEEYDLLISATRGTGLAQLK 431
L+ L EEK + + L NK D + P E +LISA + GL +L
Sbjct: 300 VLKELGAEEKPIIYAL---NKADKLVETENEMNHLPHPAFIEGDAVLISAEKRWGLGKLL 356
Query: 432 EKV 434
+K+
Sbjct: 357 DKI 359
>gi|381190293|ref|ZP_09897816.1| GTP-binding proten HflX [Thermus sp. RL]
gi|384430761|ref|YP_005640121.1| GTP-binding proten HflX [Thermus thermophilus SG0.5JP17-16]
gi|333966229|gb|AEG32994.1| GTP-binding proten HflX [Thermus thermophilus SG0.5JP17-16]
gi|380451886|gb|EIA39487.1| GTP-binding proten HflX [Thermus sp. RL]
Length = 550
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 164/318 (51%), Gaps = 24/318 (7%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D + G G LE LK + T +F VD L Q + ++ + + V DR +++
Sbjct: 230 SLDPRYLVGLGKLEELKSLAYHENASTLIF-GVD-LTPAQAREIERVTGLKVLDRTQLIL 287
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLM 247
IF HAKT EA+ Q+ +A+L YL R R + L+ R L
Sbjct: 288 DIFALHAKTPEAQAQVELAQLRYLLPRLVGKGKEMSRLGGGIGTRGPGETKLEVDRRRLQ 347
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
+R L + L +R+ R K++R+ P VAVVGYTN GKTTL++ALT ++
Sbjct: 348 DRIAHLSRKLQDYALRRKEARQKRKRRGVPLVAVVGYTNAGKTTLLRALTRAGE-EGEDK 406
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATL T G LP +L+ DT+GFI ++P LL F+ TLE+ AD+++HV+D S
Sbjct: 407 LFATLRPLTRRGFLPGVGEVLFTDTVGFIRHMPEELLTAFRATLEEVREADVLVHVLDAS 466
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP------GERVTEEYDLLISA 421
L++ + V + L L +E + VL + NK D P GER+ + +SA
Sbjct: 467 EEGALERHRVVRDLLLDLGVEAPV---VLAL-NKADRAAPYDLYFLGERLG---GVPVSA 519
Query: 422 TRGTGLAQLKEKVQDMIL 439
+GTGL +LKE + +L
Sbjct: 520 LKGTGLKELKEALARALL 537
>gi|399524221|ref|ZP_10764789.1| GTP-binding protein HflX [Atopobium sp. ICM58]
gi|398374663|gb|EJN52241.1| GTP-binding protein HflX [Atopobium sp. ICM58]
Length = 507
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 173/347 (49%), Gaps = 30/347 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G RV+D I + D ++ G G L VR V A V VD L
Sbjct: 102 AALAETAGSRVLDGIIQRRMKPDPATYLGSGKARELADIVRA---VEADTVIVDEELAPS 158
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 159 QRRGLEDVVDAKVVDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGESMSRQA 218
Query: 235 -----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
TK LD +R + R KL+ + +++ R R ++R P
Sbjct: 219 GGRVAGGAGIGSRGPGETKIELDRRR--IRTRMAKLRADIARMEPARRTQRGSRRRGGVP 276
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+VA+ GYTN GK+TL+ LTD LV ++ LFATLD T + DT+GF+
Sbjct: 277 SVAIAGYTNAGKSTLLNRLTDAGVLV-QDALFATLDPTVRRARAADGREYTLTDTVGFVR 335
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
N+PT L+E F+ TLE+ AD+++HVVD ++PD + Q Q V + +E I E L+
Sbjct: 336 NLPTQLVEAFRSTLEEVGQADVVLHVVDAAHPDPVSQVQAVRAVIDTIEGASDIPE--LI 393
Query: 398 VGNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
NK D P + R + +SA G G+ L+ ++DM+ +
Sbjct: 394 ALNKADLASPEQIALLRTVFPRAVPLSAYTGWGVDALRVALEDMLPR 440
>gi|115351795|ref|YP_773634.1| small GTP-binding protein [Burkholderia ambifaria AMMD]
gi|115281783|gb|ABI87300.1| GTP-binding protein HflX [Burkholderia ambifaria AMMD]
Length = 396
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 177/339 (52%), Gaps = 28/339 (8%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E +L++S G R + S D K F G G E L+ + DA + + L
Sbjct: 26 EELSLLASSAGARPAVTLTGRRASPDAKMFIGSGKAEELR--LACDAHNVEIVIFNHALA 83
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
QQ+ L+ V DR +++ IF A++ E +LQ+ +A+L YL TR I T++
Sbjct: 84 PAQQRNLEQALNRRVVDRTSLILDIFAQRARSHEGKLQVELAQLQYLSTRL--IRAWTHL 141
Query: 233 NITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
KG L++ R ++ ER + LK L++L+ Q R ++ R +V++V
Sbjct: 142 ERQKGGIGLRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSGTMSVSLV 201
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPT 341
GYTN GK+TL ALT + +QLFATLD T+ L + + +I+ DT+GFI +P
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAA-DQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPH 260
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
L+ F+ TLE+ + AD+++HVVD S+ L+Q + V+ L E+ + VLV NK
Sbjct: 261 QLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLH--EIGADTIRQVLVF-NK 317
Query: 402 VDAVPP----GERVT-EEYD----LLISATRGTGLAQLK 431
+DAVP G+ V +EY + +SA G GL L+
Sbjct: 318 IDAVPELAARGDAVERDEYGNISRVFLSARTGQGLDTLR 356
>gi|374260547|ref|ZP_09619144.1| GTP binding protein HflX [Legionella drancourtii LLAP12]
gi|363539128|gb|EHL32525.1| GTP binding protein HflX [Legionella drancourtii LLAP12]
Length = 418
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 177/325 (54%), Gaps = 26/325 (8%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRG-DARVTAVFVSVDVLKLHQQKMLQDLFQ 184
V+D + + + + K + GKG E + + V+ DA + V V+ + L Q++ L+ L +
Sbjct: 41 VLDCVLGTRATPEAKYYVGKGKAEEIAQLVKALDAEL--VLVNHE-LSPSQERNLERLLE 97
Query: 185 VPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------ 238
V DR +++ IF A+T E +LQ+ +A+L +L TR I T++ KG
Sbjct: 98 CRVVDRSGLILDIFAQRARTFEGKLQVELAQLQHLSTRL--IRGWTHLERQKGGIGLRGP 155
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
L++ R +L ER + + + L K++ R+ R +++ PTV++VGYTN GK+TL
Sbjct: 156 GETQLETDRRLLRERIKYINRRLEKVRCSRDQNRQARRKAAMPTVSLVGYTNAGKSTLFN 215
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
ALT + V NQLFATLD T + LP ++ DT+GFI ++P L+E F+ TLE+
Sbjct: 216 ALTGERIYVA-NQLFATLDPTMRQLSLPGASGVILADTVGFIRDLPHHLVEAFRATLEET 274
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEE 414
AD+++HV+D+S+P + V + L L + + V+ V NK+D + G +
Sbjct: 275 QQADLLLHVIDISDPHWRDTVFSVQQVLDELGVNDI---PVIQVFNKID-LQEGWEAKID 330
Query: 415 YD-----LLISATRGTGLAQLKEKV 434
Y+ + ISA GL LKE +
Sbjct: 331 YNQEWCKVWISAAANIGLDLLKEAI 355
>gi|288958341|ref|YP_003448682.1| GTP-binding protein [Azospirillum sp. B510]
gi|288910649|dbj|BAI72138.1| GTP-binding protein [Azospirillum sp. B510]
Length = 426
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 203/411 (49%), Gaps = 32/411 (7%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD- 169
L E+ L +IQ VV + + + G G +E L + V A V +D
Sbjct: 21 LEEAVGLAQAIQ-LDVVHAECAKVNRPQPSTLLGSGTVEQLAQVVE---ESEAALVILDH 76
Query: 170 VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA 229
L QQ+ L+ + V DR ++++IF A A+TRE LQ+ +A L Y + R +
Sbjct: 77 ALSPVQQRNLERSLKAKVIDRTGLILEIFGARARTREGMLQVELASLTY--QKSRLVRSW 134
Query: 230 TNMN-----------ITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
T++ + L+ R ++ +R K+KK L +++ R + R + + +P
Sbjct: 135 THLERQRGGFGFLGGPGESQLELDRRLIGDRIIKIKKELEEVRRTRGLHRKARAKVPYPV 194
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+VGYTN GK+TL L + D ++ LFATLD T + LP+ +++ DT+GFIS+
Sbjct: 195 VALVGYTNAGKSTLFNRLANADVFA-QDLLFATLDPTMRQVTLPSGRKVILSDTVGFISD 253
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+P L+ F+ TLE+ ADII+HV D+++ D QK V E L + ++ +I + V+ V
Sbjct: 254 LPHGLVAAFRATLEEVDAADIILHVRDIAHIDSEAQKADVHEVLSDMGIDPEIDDRVIEV 313
Query: 399 GNKVDAVPPGERVT-------EEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
NK+DA+ R + +SA G G+ L +++ D + R+ + + V
Sbjct: 314 LNKIDALDEESRAAILVQTGRNPRAVAVSALSGEGIDDL-DRLLDQRMN-VNRQVVDLSV 371
Query: 452 RSG-GSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISS 501
G G+ WL + V R+D+ A L V + V + +F F S
Sbjct: 372 GLGDGAALAWLYARSEVLERRDDEERAH---LHVSIDPVDLARFAKRFQPS 419
>gi|379056619|ref|ZP_09847145.1| GTP-binding protein HflX [Serinicoccus profundi MCCC 1A05965]
Length = 514
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 170/341 (49%), Gaps = 26/341 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+D I D ++ G G + L+ V + T V L Q
Sbjct: 119 AALAETAGSTVLDGVIQRRQKPDPATYLGSGKAKELQEIVAAEGADTVVCDGE--LGPSQ 176
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI- 234
++ L+D+ +V V DR +++ IF HAK+RE R Q+ +A+L YL R R ++ +
Sbjct: 177 RRALEDVVKVKVIDRTALILDIFAQHAKSREGRAQVELAQLQYLLPRLRGWGESMSRQAG 236
Query: 235 ----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
TK LD +R + R KL++ ++ +K R+ R+ ++ + P+
Sbjct: 237 GRVAGGEGIGSRGPGETKIELDRRR--INTRIAKLRREISGMKTMRDTKRSSRRAGRVPS 294
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+VGYTN GK++L+ LT LV +NQLFATLD T DT+GF+
Sbjct: 295 VAIVGYTNAGKSSLLNRLTGAGVLV-QNQLFATLDPTVRRTESEEGRGYTLSDTVGFVKR 353
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+P L+E F+ TLE+A AD+++HVVD S+PD Q V L +E + +V
Sbjct: 354 LPHQLVEAFRSTLEEAADADVLLHVVDGSHPDPEGQVDAVHAVLAEIEEGAALKIPEIVA 413
Query: 399 GNKVDAVPPG--ERVTEEYD--LLISATRGTGLAQLKEKVQ 435
NK D P +R+ Y +++SA G G+ +L V+
Sbjct: 414 VNKADLADPEVLDRLRRAYPRVVVVSARTGDGVPELIAAVE 454
>gi|416250649|ref|ZP_11637329.1| GTP-binding proten HflX [Moraxella catarrhalis CO72]
gi|326573980|gb|EGE23929.1| GTP-binding proten HflX [Moraxella catarrhalis CO72]
Length = 469
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 162/298 (54%), Gaps = 26/298 (8%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+ L + V DR +++ IF A+T E +LQ+ +A+L +L TR + T++
Sbjct: 98 QERNLESLIKCRVLDRTGLILDIFAQRARTHEGKLQVELAQLNHLATRL--VRGWTHLER 155
Query: 235 TKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGY 284
KG L++ R +L R +LK L+K+K R+ R K+Q+ PT+++VGY
Sbjct: 156 QKGGIGLRGPGETQLETDRRLLQIRVTQLKAKLDKVKQTRKQGRAKRQKSDIPTISLVGY 215
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
TN GK+TL LTDD+ + +QLFATLD T P ++ DT+GF+ ++P L+
Sbjct: 216 TNAGKSTLFNRLTDDN-IYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFVRHLPHELV 274
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA 404
E F TLE+A+ AD+++HV+D ++ D Q + V++ L+ ++ + I L+V NK+D
Sbjct: 275 ESFHATLEEALEADLLLHVIDAASEDMHAQIEAVNDVLEQIQADAPI----LLVFNKIDK 330
Query: 405 VPPGERVTEEYD-------LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGG 455
GE Y + +SA G+ QL VQ+++ +T+ +G
Sbjct: 331 --SGEPAKIHYQDHGVPHRVYVSAKENLGINQLMLAVQELLSGQLNHYTLTLPHHAGA 386
>gi|414166887|ref|ZP_11423117.1| GTP-binding protein HflX [Afipia clevelandensis ATCC 49720]
gi|410892165|gb|EKS39960.1| GTP-binding protein HflX [Afipia clevelandensis ATCC 49720]
Length = 417
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 201/407 (49%), Gaps = 31/407 (7%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E+ L +I V ++ I L ++ GKG +E + ++ A + V
Sbjct: 12 LEEAAGLARAID-LTVAEAVIAPLSDIRPATYLGKGKVEEMLGLIK--ANDVDLVVMDCA 68
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
L QQ+ L+ ++ V DR ++++IF AKTRE LQ+ +A L Y R R + T
Sbjct: 69 LSPVQQRNLEKEWKAKVLDRTGLILEIFGRRAKTREGTLQVELAHLNY--QRSRLVRSWT 126
Query: 231 NMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +G +++ R ++ ER K++ L K++ R + R +QR + V
Sbjct: 127 HLERQRGGFGFMGGPGETQIEADRRMISERISKIESELKKVQATRRLHRAGRQRVPYRVV 186
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL LT D + + LFATLD T LP+ + + DT+GFIS++
Sbjct: 187 ALVGYTNAGKSTLFNRLTRAD-VQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISDL 245
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+ F+ TLE+ + AD+I+HV D+S+ D Q+ V+ L+ L ++ + +L V
Sbjct: 246 PTMLVAAFRATLEEVIEADVILHVRDISHEDAEAQQHDVEGVLRQLGIDLDGGQRILEVW 305
Query: 400 NKVDAVP----------PGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITM 449
NK+D R E +SA G GL L ++D + A R + +
Sbjct: 306 NKIDRFDEDGRANLMNIAARRPPERPCFPVSAETGEGLDALLAAIEDRL--AATRVTLDL 363
Query: 450 RV-RSGGSEYQWLMKHTAVSNIR-EDDTSAEHLLLDVVMTDVIMNKF 494
+ S G+ WL ++ V + E+ A + +D+ D+ + KF
Sbjct: 364 TIDPSDGAGISWLHRNAEVLDKHLENGRFAMTVRVDISKRDITIAKF 410
>gi|319948153|ref|ZP_08022315.1| GTP-binding proten HflX [Dietzia cinnamea P4]
gi|319438182|gb|EFV93140.1| GTP-binding proten HflX [Dietzia cinnamea P4]
Length = 483
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 189/359 (52%), Gaps = 31/359 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G V D+ I D +F G G + +LK + A A V D L
Sbjct: 78 AQLAETAGSEVCDALIQRRDKPDAATFIGSGKVSVLKDVI---AATGADTVICDGELTPG 134
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA----- 229
Q L+ V V DR +++ IF HA +RE + Q+++A++ Y+ R R ++
Sbjct: 135 QLLALEKAVNVKVIDRTALILDIFAQHATSREGKAQVSLAQMEYMLPRLRGWGESLSRQA 194
Query: 230 ---TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
N G +++ R + ER KL++ + +K R+ R +++ P++
Sbjct: 195 GGRAGSNGGVGLRGPGETKIETDRRRIRERMAKLRREIKGMKQSRDTKRYRRRATPVPSI 254
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+ GYTN GK++L+ +T LV +N LFATLD TT LP+ +++ DT+GF+ ++
Sbjct: 255 AIAGYTNAGKSSLLNRITGAGVLV-QNALFATLDPTTRRADLPDGRSVVFTDTVGFVRHL 313
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV--LV 397
PT L+E F+ TLE+ + +++++HVVD S+ L+Q + V + + + +EE+ E LV
Sbjct: 314 PTQLVEAFRSTLEEVVDSELLLHVVDGSDAFPLRQIEAVRKVINEV-VEEQNAERPRELV 372
Query: 398 VGNKVDAVPPGERVTEEYDLL-----ISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
V NK+DA P +TE + L +SA G G+ +L E++ ++ A+G +T+ V
Sbjct: 373 VINKIDAADP-VVLTELHHALPDAVFVSAATGQGVDELLERIMQIV--ASGDMEMTLEV 428
>gi|225021216|ref|ZP_03710408.1| hypothetical protein CORMATOL_01228 [Corynebacterium matruchotii
ATCC 33806]
gi|224945949|gb|EEG27158.1| hypothetical protein CORMATOL_01228 [Corynebacterium matruchotii
ATCC 33806]
Length = 560
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 178/342 (52%), Gaps = 26/342 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G VVD D ++ G G ++ LK V+ + V + L Q
Sbjct: 157 AALAQTAGSEVVDMLYQKRDRPDPGTYIGSGKVQELKDIVQA-TNIDTVICDGE-LSPGQ 214
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNIT 235
L+ V V DR M+++ IF HAK++E + Q+++A++ YL TR R A +
Sbjct: 215 MIALEKALDVKVIDRTMLILDIFAQHAKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAG 274
Query: 236 KGF----------------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
+++ R L KL+K + ++ RE+ R++++ P +
Sbjct: 275 GRAGGSNGGVGLRGPGETKIEADRRRLRSDMAKLRKEIAGMQTAREIKRSRRRASTIPQI 334
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+ GYTN GK++LI A+T LV + LFATLD TT L + +++ DT+GF+ ++
Sbjct: 335 AIAGYTNAGKSSLINAITGAGVLV-EDALFATLDPTTRRAELADGRTVVFTDTVGFVRHL 393
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLV 397
PT L+E F+ TLE+ + AD+++HVVD S+P L+Q V++ + + E E ++V
Sbjct: 394 PTQLVEAFRSTLEEVVGADLVLHVVDGSDPFPLKQIAAVNKVIGEIVQEYGETAPPEIIV 453
Query: 398 VGNKVDAVPP---GE-RVTEEYDLLISATRGTGLAQLKEKVQ 435
V NK+DA P E R + + +SA G G+++L+ +++
Sbjct: 454 V-NKIDAADPLVLAELRHAVDDVVFVSAHTGEGISELEARIE 494
>gi|329850675|ref|ZP_08265520.1| GTP-binding protein HflX [Asticcacaulis biprosthecum C19]
gi|328840990|gb|EGF90561.1| GTP-binding protein HflX [Asticcacaulis biprosthecum C19]
Length = 441
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 201/391 (51%), Gaps = 31/391 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRG-DARVTAVFVSVDVLKLHQQKMLQDLFQ 184
+ S + + + + FG G +E +K DA + V S+ + QQ+ L+ +
Sbjct: 54 IAGSLSVRVRKLNPATLFGAGKVEEIKALCEEVDASLCVVNGSLTPI---QQRNLEKELE 110
Query: 185 VPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT---RYRTIEDATNMNI 234
V DR ++++IF A+TRE +LQ+ +A L Y WT R R
Sbjct: 111 RKVIDRTGMILEIFGRRARTREGKLQVELARLEYEKSRLVRTWTHLERQRATGTTGGPGE 170
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
T+ LD R ++ ++ ++LK L++++ R + R ++++ +P VA+VGYTN GK+TL
Sbjct: 171 TQIELD--RRMIADKIKQLKTELDEVRRTRALHRVQRKKVPYPIVALVGYTNAGKSTLFN 228
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT + +V ++ LFATLD T LPN + DT+GFIS++P L+ F+ TLE+
Sbjct: 229 HLTRAE-VVAKDLLFATLDTTLRTLKLPNGRSAMLSDTVGFISDLPHELVAAFRATLEEV 287
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER---- 410
AD+I+HV DVSNP+ Q+Q V++ LQH+ L + + V NK+D + P +
Sbjct: 288 EQADLILHVRDVSNPETEAQRQDVEQVLQHI-LPDLDRGRMFEVWNKIDLLDPDSKEVLY 346
Query: 411 ---VTE---EYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKH 464
VT + L +SA G G+ L +V +++ A G + + G +L +H
Sbjct: 347 ARSVTSRDAQKPLPVSAVTGEGIEALLARVANLV-DADGEEIDLVLEPHQGDALAFLYQH 405
Query: 465 TAVSNIREDDTSAEHLLLDVVMTDVIMNKFK 495
V ED+ H + V ++D+ +++
Sbjct: 406 GRVIARHEDEDGKVH--VKVKLSDMAYGRYE 434
>gi|395786337|ref|ZP_10466064.1| GTP-binding protein HflX [Bartonella tamiae Th239]
gi|395422635|gb|EJF88831.1| GTP-binding protein HflX [Bartonella tamiae Th239]
Length = 456
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 193/384 (50%), Gaps = 27/384 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VV+ +++ + + G G +E R + D + + + + QQ+ L+ +
Sbjct: 60 VVEHHKVTMNTLRPATLLGPGKVEEFSRIIE-DKEIDLAIIDRGLTPV-QQRNLEKFWNC 117
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
V DR ++++IF A T+E LQ+ +A L Y + R + T++ +G
Sbjct: 118 KVIDRTALILEIFGDRAATKEGVLQVELAHLNY--QKGRLVRSWTHLERQRGGGGFLGGP 175
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
++S R L ++ ++K+ L+ + R + R K+++ P +A+VGYTN GK+TL
Sbjct: 176 GETQIESDRRQLQDKIVRIKRELDTVVKTRALHRAKRKKTSHPVIALVGYTNAGKSTLFN 235
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT + L ++ LFATLD T LP+ ++ DT+GFISN+PT L+ F+ TLE+
Sbjct: 236 QLTGANVLA-KDMLFATLDPTLRRITLPHGQLVILSDTVGFISNLPTHLIAAFRATLEEV 294
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT-- 412
+ AD+I+HV D+S+PD+ Q V + L+ L ++ H+ + NK D + R T
Sbjct: 295 IEADLILHVRDMSDPDHYIHAQDVRDILKSLGVDIDDHNHIFEIWNKTDLLDDISRETLK 354
Query: 413 ------EEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTA 466
Y L+SA +G GL +L++ ++ I + NI ++ W+ K+
Sbjct: 355 ETARNAANYAFLVSALKGEGLLELEKAIERQISGEMIQHNIRLKAEDFAL-LDWIYKN-- 411
Query: 467 VSNIREDDTSAEHLLLDVVMTDVI 490
V NI + ++L V+T I
Sbjct: 412 VGNIERHNEDDGSIVLKFVITQEI 435
>gi|349859108|gb|AEQ20588.1| GTP-binding protein HflX [uncultured bacterium CSLF42]
Length = 394
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 189/381 (49%), Gaps = 56/381 (14%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D +F GKG L QV T VF D LK QQ+ L+++ V V DR +++
Sbjct: 18 SPDPATFVGKGKALELAEQVLKHRVQTLVFD--DELKPVQQRNLEEITGVKVVDRTRLIL 75
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTR----YRTIEDATNMNITKGFLDSKRMVLMEREQ 251
IF A+TRE LQ+ +A+L YL R + E T+G + K V R +
Sbjct: 76 DIFAQRARTREGILQVELAQLDYLLPRITERFGRFEQQVGGIGTRGPGERKLEVDRRRIR 135
Query: 252 K----LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR-- 305
LK +++++ +R + R+ ++ P VA+VGYTN GK+TL+ AL S P+
Sbjct: 136 DRIAHLKSLIDRIREERRLQRHPRRSIPVPQVALVGYTNAGKSTLLNALLRSSSGAPKAP 195
Query: 306 -------NQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLAD 358
++LF TLD T L + IL+ DT+GFI +PT L+ F+ TLE+ AD
Sbjct: 196 HHHAYADDKLFTTLDPITRRVRLLSGRTILFSDTVGFIRKLPTQLVAAFRATLEEVAEAD 255
Query: 359 IIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER-------- 410
+++ VVD S+PD+ Q Q V++ L+ L++++ L NK+D + P ER
Sbjct: 256 LLLLVVDASDPDWAGQLQTVEQVLKALQVDQLPR---LTAYNKMDCLSPSERALFQRRDG 312
Query: 411 -----------------VTE-------EYDLLISATRGTGLAQLKEKVQDMILKATGRKN 446
V E E++ L S G +A+++E + + LK+T +
Sbjct: 313 VLISAVSGHRMESLLKAVEERLAHQWVEHEFLFSYQEGDRIARVREHMDVISLKST-EEG 371
Query: 447 ITMRVRSGG-SEYQWLMKHTA 466
I +RVR+ + QWL HTA
Sbjct: 372 IRVRVRTHPVTLAQWLKSHTA 392
>gi|254464339|ref|ZP_05077750.1| GTP-binding proten HflX [Rhodobacterales bacterium Y4I]
gi|206685247|gb|EDZ45729.1| GTP-binding proten HflX [Rhodobacterales bacterium Y4I]
Length = 423
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 198/387 (51%), Gaps = 29/387 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VV S ++ L FG G +E L ++ + + V + V + QQ+ L+ ++V
Sbjct: 45 VVGSNVVRLPKAHAGMLFGSGKIEELAGILKAN-EIELVLIDGPVSPV-QQRNLEKAWKV 102
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
+ DR ++++IF A TRE LQ+ +A L Y R R + T++ +G
Sbjct: 103 KILDRTGLILEIFSDRAATREGVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGP 160
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+++ R + ++ +L++ L+K+ R + R + + +P VA+VGYTN GK+TL
Sbjct: 161 GETQIEADRRAIDDQLVRLRRQLDKVVKTRTLHRASRAKVPYPIVALVGYTNAGKSTLFN 220
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT + ++ ++ LFATLD T LP+ I+ DT+GFISN+PT L+ F+ TLE+
Sbjct: 221 RLTGAE-VMAKDMLFATLDPTMRRVELPDGPEIILSDTVGFISNLPTELVAAFRATLEEV 279
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE----- 409
+ AD+I+HV D+S+ D QQ + V+ L L ++E + + V NK+D +P E
Sbjct: 280 LAADVILHVRDISHHDSKQQAEDVEAILASLGVDENRVR--IEVWNKLDQLPEEEAEARR 337
Query: 410 -RVTEEYDL-LISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
R E + ISA G GL L + + + + +T+ + G + WL K V
Sbjct: 338 QRAEREDGIHAISALTGEGLDGLLADIAEKLQGVRHEEVLTLTF-AQGKQRAWLFKEDLV 396
Query: 468 SNIREDDTSAEHLLLDVVMTDVIMNKF 494
++ +T + + V+ TD KF
Sbjct: 397 QQEKQTETGFD---VTVLWTDRQKAKF 420
>gi|254248076|ref|ZP_04941397.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184]
gi|124872852|gb|EAY64568.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184]
Length = 390
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 177/339 (52%), Gaps = 28/339 (8%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E +L++S G R + S D K F G G E L+ + DA + + L
Sbjct: 21 EELSLLASSAGARPAVTLSGRRASPDAKMFIGSGKAEELR--LACDAHNVEIVIFNHALA 78
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
QQ+ L+ V DR +++ IF A++ E +LQ+ +A+L YL TR I T++
Sbjct: 79 PAQQRNLEQALNRRVVDRTSLILDIFAQRARSHEGKLQVELAQLQYLSTRL--IRAWTHL 136
Query: 233 NITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
KG L++ R ++ ER + LK L++L+ Q R ++ R +V++V
Sbjct: 137 ERQKGGIGLRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSGTMSVSLV 196
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPT 341
GYTN GK+TL ALT + +QLFATLD T+ L + + +I+ DT+GFI +P
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAA-DQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPH 255
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
L+ F+ TLE+ + AD+++HVVD S+ L+Q + V+ L E+ + VLV NK
Sbjct: 256 QLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLH--EIGADTIRQVLVF-NK 312
Query: 402 VDAVPP----GERVT-EEYD----LLISATRGTGLAQLK 431
+DAVP G+ V +EY + +SA G GL L+
Sbjct: 313 IDAVPELAARGDAVERDEYGNISRVFLSARTGQGLDTLR 351
>gi|159044115|ref|YP_001532909.1| GTP-binding protein [Dinoroseobacter shibae DFL 12]
gi|157911875|gb|ABV93308.1| GTP-binding protein [Dinoroseobacter shibae DFL 12]
Length = 415
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 190/367 (51%), Gaps = 26/367 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
V + I+ L FG G +E L+ ++ D + V + V + QQ+ L+ ++
Sbjct: 34 VAGADIVRLSKVQPGLLFGSGKIEELRARIEAD-EIGLVLIDGPVSPV-QQRNLERAWKT 91
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
+ D ++++IF A+TRE LQ+ +A L Y R R + T++ +G
Sbjct: 92 KILDSTGLILEIFADRARTREGVLQVELAALAY--QRTRLVRSWTHLERQRGGLGFVGGP 149
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+++ R + E ++K+ L K+ RE+ R +++ +P VA+VGYTN GK+TL
Sbjct: 150 GETQIEADRRAIDEAVTRIKRQLAKVVKTRELHRAARKKVPYPIVALVGYTNAGKSTLFN 209
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT + L ++ LFATLD T LP+ L ++ DT+GFIS++PT L+ F+ TLE+
Sbjct: 210 HLTGAEVLA-KDMLFATLDPTMRALKLPDGLEVILSDTVGFISSLPTELVAAFRATLEEV 268
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE----- 409
+ AD+I+HV D+++PD Q + V + L+ L ++++ ++ V NK+D +P E
Sbjct: 269 LDADLILHVRDIAHPDSAAQAEDVHKILEALGVKDE--RPMIEVWNKLDLLPEAEAEALR 326
Query: 410 -RVTEEYDLL-ISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
+ D+L ISA G G L+ + + A + + + + G WL + V
Sbjct: 327 TSAARQDDVLAISALSGEGFDTLQAAISARLTPALLDEVVVVPF-AQGRVRAWLFEQGVV 385
Query: 468 SNIREDD 474
+ +D+
Sbjct: 386 LDESQDE 392
>gi|374308648|ref|YP_005055079.1| GTP-binding protein HflX [Filifactor alocis ATCC 35896]
gi|291166975|gb|EFE29021.1| GTP-binding protein HflX [Filifactor alocis ATCC 35896]
Length = 428
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 174/324 (53%), Gaps = 27/324 (8%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D K + GKG +E L R++ + V + + + L Q + L++ V V DR M+++
Sbjct: 57 SVDVKYYIGKGKVEEL-RELAENMEVNLIVFN-NELSGSQLRNLEEGIGVTVIDRTMLIL 114
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMV 245
IF A+T E +LQ+ +A+L Y R I +TN++ T L++ +
Sbjct: 115 DIFAKRARTGEGKLQVELAQLKYKLPRL--INSSTNLSRTGAGIGARGPGEKKLETDKRR 172
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKAL-------TD 298
+ + ++++ L ++K RE+ R + + + P VA+ GYTN GK+TL L T+
Sbjct: 173 IQRKIFEIERELKEVKHNREVQRKGRLKSELPIVALAGYTNAGKSTLFNELLKEHKEYTE 232
Query: 299 DDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLAD 358
+ + +N LFATLD T + LPN + L DT+GF+SN+P L+ F TLE+ AD
Sbjct: 233 EKEVFVKNMLFATLDTTLRKSQLPNGMEYLLTDTVGFVSNLPHDLVNAFHSTLEEIKYAD 292
Query: 359 IIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILE-HVLVVGNKVDAVPPGERVTEEYD- 416
+I+HVVDVSN Y Q T QH+ E + + ++ V NK+D + +++E +
Sbjct: 293 LILHVVDVSNEKYDLQMN----TTQHVLKEIGVGDIPIVTVFNKIDLLEENFVISKESNK 348
Query: 417 LLISATRGTGLAQLKEKVQDMILK 440
+ ISA G +L EK+Q ++ K
Sbjct: 349 ISISAKTGYHKQELLEKIQSIVCK 372
>gi|427723481|ref|YP_007070758.1| GTP-binding protein HflX [Leptolyngbya sp. PCC 7376]
gi|427355201|gb|AFY37924.1| GTP-binding protein HflX [Leptolyngbya sp. PCC 7376]
Length = 566
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 153/280 (54%), Gaps = 20/280 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTI 226
Q + L+ F V V DR +++ IF A++R +LQ+ +A+L Y+ R R
Sbjct: 288 QSRNLERKFGVKVCDRTEVILDIFAQRAQSRAGKLQVELAQLEYMLPRLTGRGQAMSRLG 347
Query: 227 EDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTN 286
+ L+++R + R +L+K +++L+ R MRN++QRQ PT ++VGYTN
Sbjct: 348 GGIGTRGPGETKLETERRTIQNRLSRLQKEVDQLQAHRSRMRNQRQRQDVPTFSIVGYTN 407
Query: 287 CGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPN----RLRILYVDTIGFISNIPTT 342
GK+TLI ALT+ + + +QLFATLD TT L + IL DT+GFI +P
Sbjct: 408 AGKSTLINALTNAE-VYAADQLFATLDPTTRRLTLTDDDHQARTILLTDTVGFIHELPPA 466
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L++ F+ TLE+ AD +IHV+D+S+P + Q V++ L+ + + + L+V NK+
Sbjct: 467 LVDAFRATLEEVTEADALIHVIDLSHPAWQHQLHSVEKILEEMPI---MPAQALLVFNKL 523
Query: 403 DAVPP----GERVTEEYDLLISATRGTGLAQLKEKVQDMI 438
D VP + + + ISA G L++++ M+
Sbjct: 524 DQVPSEALDTAKTLYPHAIFISAGDRLGFETLRQRLTQML 563
>gi|398831858|ref|ZP_10590033.1| GTP-binding protein HflX [Phyllobacterium sp. YR531]
gi|398211184|gb|EJM97806.1| GTP-binding protein HflX [Phyllobacterium sp. YR531]
Length = 471
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 201/399 (50%), Gaps = 32/399 (8%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD- 169
L E+K L +I +V S I+ + + + G G ++++ + A V VD
Sbjct: 65 LEEAKGLARAID-LDIVHSDIVQVSAPRPATLLGSGKVDMIAEIIE---ETHAELVIVDH 120
Query: 170 VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA 229
L QQ+ L+ + V DR ++++IF A+T+E LQ+ +A L Y + R +
Sbjct: 121 ALTPVQQRNLEKAWNAKVLDRTGLILEIFGRRAQTKEGTLQVELAHLTY--QKGRLVRSW 178
Query: 230 TNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
T++ +G ++S R L E+ ++K+ L + R + R+K+++ P
Sbjct: 179 THLERQRGGGGFLGGPGETQIESDRRALQEKILRIKRELETVVRTRALHRSKRRKVPHPI 238
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+VGYTN GK+TL +T +V + LFATLD T L + ++ DT+GFISN
Sbjct: 239 VALVGYTNAGKSTLFNRMTGA-GVVAEDMLFATLDPTLRRIRLEHGEMVILSDTVGFISN 297
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+PT L+ F+ TLE+ + AD+I+H+ D+S+PD Q + V + L +E + ++ V
Sbjct: 298 LPTHLVAAFRATLEEVVEADLILHIRDISDPDTAAQAEDVHGIMADLGIERGDTKRIIEV 357
Query: 399 GNKVDAV-PPGERVTE---------EYDLLISATRGTGLAQLKEKVQDMILKATGRKNIT 448
NK+D + PG + E+ + +SA G G+ L ++++ I +T
Sbjct: 358 WNKIDLLDEPGRETAQRLSAAATGNEHPVPVSAITGEGVDFLLSEIENRIAGKLAHVKLT 417
Query: 449 MRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMT 487
++ G W+ +H+ SN++ D ++L + MT
Sbjct: 418 LKPEQMGL-IDWIYQHS--SNVKRKDQEDGSVVLTMDMT 453
>gi|296450368|ref|ZP_06892125.1| GTP-binding protein HflX [Clostridium difficile NAP08]
gi|296878780|ref|ZP_06902781.1| GTP-binding protein HflX [Clostridium difficile NAP07]
gi|296260778|gb|EFH07616.1| GTP-binding protein HflX [Clostridium difficile NAP08]
gi|296430208|gb|EFH16054.1| GTP-binding protein HflX [Clostridium difficile NAP07]
Length = 425
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 205/419 (48%), Gaps = 41/419 (9%)
Query: 104 NTTRDF--MLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARV 161
N + DF ++ E L S+ VV S + ++ + G G +E L ++ ++
Sbjct: 16 NKSEDFNELMIELGNLCSACD-IDVVGSITQNAKQVNRAFYIGTGKVEELLNLIKKESIE 74
Query: 162 TAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWT 221
VF + L Q K L++ + DR +++ IF AKTREA+LQ+ +A L Y+
Sbjct: 75 VVVFY--NELSTSQLKNLEEKLNCEIIDRTALILDIFAQRAKTREAKLQVEVASLKYMLP 132
Query: 222 RYRTIEDATNMNITKGFLDSK------------RMVLMEREQKLKKALNKLKGQREMMRN 269
R + N+ G + +K R + E+ L + L+ LK QRE R+
Sbjct: 133 RL--VGSNENLGRQSGGVGTKNRGSGEKKLELDRRRIEEKITFLNRELDDLKFQRETQRS 190
Query: 270 KKQRQKFPTVAVVGYTNCGKTTLIKALTD------DDSLVPRNQLFATLDVTTHEGMLPN 323
+++ P VA+VGYTN GK++++ L D + + +N LFATL+ + +L N
Sbjct: 191 MRRKSNLPNVALVGYTNAGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIILAN 250
Query: 324 RLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQ 383
L DT+GF+SN+P L++ F+ TLE+A AD+++HV+D+SNP Y + ++TL+
Sbjct: 251 NKEFLLSDTVGFVSNLPHDLVKAFRSTLEEACEADVLLHVIDISNPSYKNHIKVTEDTLK 310
Query: 384 HLELEEKILEHVLVVGNKVDAVPPGERVTEEYD------LLISATRGTGLAQLKEKVQDM 437
+ + + HV NK+D + E + E D L +S + + ++ + + D
Sbjct: 311 QIGADGIPMIHVY---NKIDLIDV-EVLDEILDSIDKEGLFVSVKKDINIDKMIKCICDS 366
Query: 438 ILKATGRKNITMRVRSGGSEYQWLMKHTAVSN-IREDDTSAEHLLLDVVMTDVIMNKFK 495
I K R + + G + + +S RED ++LDV +++ NK+K
Sbjct: 367 IFKDYVRCKLLIPYDKGHVVSYFNENASVISTEYRED-----GVILDVECSNIEYNKYK 420
>gi|255656198|ref|ZP_05401607.1| putative GTP-binding protein [Clostridium difficile QCD-23m63]
Length = 423
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 205/418 (49%), Gaps = 39/418 (9%)
Query: 104 NTTRDF--MLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARV 161
N + DF ++ E L S+ VV S + ++ + G G +E L ++ ++
Sbjct: 14 NKSEDFNELMIELGNLCSACD-IDVVGSITQNAKQVNRAFYIGTGKVEELLNLIKKESIE 72
Query: 162 TAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWT 221
VF + L Q K L++ + DR +++ IF AKTREA+LQ+ +A L Y+
Sbjct: 73 VVVFY--NELSTSQLKNLEEKLNCEIIDRTALILDIFAQRAKTREAKLQVEVASLKYMLP 130
Query: 222 RYRTIEDATNMNITKGFLDSK------------RMVLMEREQKLKKALNKLKGQREMMRN 269
R + N+ G + +K R + E+ L + L+ LK QRE R+
Sbjct: 131 RL--VGSNENLGRQSGGVGTKNRGSGEKKLELDRRRIEEKITFLNRELDDLKFQRETQRS 188
Query: 270 KKQRQKFPTVAVVGYTNCGKTTLIKALTD------DDSLVPRNQLFATLDVTTHEGMLPN 323
+++ P VA+VGYTN GK++++ L D + + +N LFATL+ + +L N
Sbjct: 189 MRRKSNLPNVALVGYTNAGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIILAN 248
Query: 324 RLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQ 383
L DT+GF+SN+P L++ F+ TLE+A AD+++HV+D+SNP Y + ++TL+
Sbjct: 249 NKEFLLSDTVGFVSNLPHDLVKAFRSTLEEACEADVLLHVIDISNPSYKNHIKVTEDTLK 308
Query: 384 HLELEEKILEHVLVVGNKVDA--VPPGERVTEEYD---LLISATRGTGLAQLKEKVQDMI 438
+ + + HV NK+D V + + + D L +S + + ++ + + D I
Sbjct: 309 QIGADGIPMIHVY---NKIDLIDVEVLDEILDSIDKEGLFVSVKKDINIDKMIKCICDSI 365
Query: 439 LKATGRKNITMRVRSGGSEYQWLMKHTAVSN-IREDDTSAEHLLLDVVMTDVIMNKFK 495
K R + + G + + +S RED ++LDV +++ NK+K
Sbjct: 366 FKDYVRCKLLIPYDKGHVVSYFNENASVISTEYRED-----GVILDVECSNIEYNKYK 418
>gi|386349752|ref|YP_006048000.1| small GTP-binding protein domain-containing protein [Rhodospirillum
rubrum F11]
gi|346718188|gb|AEO48203.1| small GTP-binding protein domain-containing protein [Rhodospirillum
rubrum F11]
Length = 435
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 210/418 (50%), Gaps = 28/418 (6%)
Query: 90 VVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLE 149
V+ PF++ G+ R+ + LAE+ L +I V S + + ++ G G +E
Sbjct: 18 VLHPFLRKGRPAARSP--EARLAEANGLAEAIS-LDVALSETVPMARVVPATYIGGGAVE 74
Query: 150 LLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARL 209
+ + +A ++ V V + + QQ+ L+ + V DR ++++IF A+T E ++
Sbjct: 75 RMAGIIAAEA-ISLVVVDTQLSPI-QQRNLERAWACKVIDRTGLILEIFGERARTAEGQM 132
Query: 210 QIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALN 258
Q+ +A L Y R R + T++ +G ++ R ++ +R +L+K L
Sbjct: 133 QVELAHLTY--QRSRLVRSWTHLERQRGGVGFLGGPGETQIELDRRLIGDRITRLRKDLE 190
Query: 259 KLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHE 318
+++ R + R + R +P VA+VGYTN GK+TL LT L ++ LFATLD T
Sbjct: 191 EVRRTRGLHREARARVPYPVVALVGYTNSGKSTLFNRLTAGGVLA-KDMLFATLDPTMRS 249
Query: 319 GMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHV 378
LP+ +++ DT+GF+S++P L+ F+ TLE+ AD+I+HV D++ D QK V
Sbjct: 250 LDLPSGRKVILSDTVGFVSDLPHELVAAFRATLEEVKAADVIVHVRDIAGIDSDAQKADV 309
Query: 379 DETLQHLELEEKILEHVLVVGNKVDAVPPGERV-----TEEYDLL--ISATRGTGLAQLK 431
+ L+ +EL+E++ ++ NK+D + + T D L +SA G G L
Sbjct: 310 EVVLREMELDERVESGLIEALNKIDLLDSERQAQLVEDTAGRDTLVPVSAVTGAGTDALL 369
Query: 432 EKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDV 489
++ + ++ +++ + S G+ W+ + V R DD HL + + D+
Sbjct: 370 ARIDARLAESRIVLGLSIPL-SDGATLAWVYRKGEVLE-RHDDEEQAHLTVRLDPADI 425
>gi|319407328|emb|CBI80971.1| GTP-binding protein hflX [Bartonella sp. 1-1C]
Length = 448
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 152/275 (55%), Gaps = 22/275 (8%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
QQ+ L+ L+ V DR ++++IF A+T+E LQ+ +A L Y + R + T++
Sbjct: 108 QQRNLEKLWNCKVIDRTALILEIFGDRARTKEGVLQVELAHLSY--QKSRLVRSWTHLER 165
Query: 235 TKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVG 283
+G +++ R +L + +++ L + R + R K++R P +A+VG
Sbjct: 166 QRGGTGFLGGPGETQIEADRRLLQNKIISIRRELETVVKTRALHRAKRKRIPHPVIALVG 225
Query: 284 YTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTL 343
YTN GK+TL L+D + L + LFATLD T + +LP+ +L DT+GFISN+PT L
Sbjct: 226 YTNAGKSTLFNRLSDSNVLA-EDMLFATLDPTLRKIVLPHGQTVLLSDTVGFISNLPTHL 284
Query: 344 LEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+ F+ TLE+ + AD+I+HV DVS+PD+ Q V E L L ++ +H++ + NK+D
Sbjct: 285 IAAFRATLEEVIEADLILHVRDVSDPDHYAHAQDVFEILSDLGVDINDTDHIVEIWNKID 344
Query: 404 --------AVPPGERVTEEYDLLISATRGTGLAQL 430
+ + L+ISA G GL+QL
Sbjct: 345 TLDQHALGVLQTNSKKMLNSALMISALTGKGLSQL 379
>gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b]
gi|149811066|gb|EDM70903.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b]
Length = 425
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 209/411 (50%), Gaps = 36/411 (8%)
Query: 84 TDHQVFVVQPFIKWGKKMKRNTTRDFMLA--ESKALVSSIQGWRVVDSTIISLLSFDKKS 141
D + +V+ P I + RD LA E+ +L ++ G VV + ++ + +
Sbjct: 7 ADTRAWVLHPDIP-----NAASGRDPQLALEEAVSLGHALPGLDVVGAQVVRVRQPHPGT 61
Query: 142 FFGKGNLELLKRQVRGDAR-VTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
FGKG LE L + DA+ + V + V + QQ+ L+ + V + DR ++++IF
Sbjct: 62 LFGKGKLEELHALI--DAQEIELVLIDGPVTPV-QQRNLEKAWGVKLLDRTGLILEIFSD 118
Query: 201 HAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMER 249
A TRE LQ+ +A L Y R R + T++ +G +++ R + E+
Sbjct: 119 RAATREGVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDEQ 176
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
+L++ L+K+ RE+ R + + FP VA+VGYTN GK+TL +T D ++ ++ LF
Sbjct: 177 LVRLRRQLSKVVRTRELHRAARAKVPFPIVALVGYTNAGKSTLFNRMTGAD-VMAKDMLF 235
Query: 310 ATLDVTTHEGMLPNR-LRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSN 368
ATLD T LP ++ DT+GFIS++PT L+ F+ TLE+ + AD+I+HV D+S+
Sbjct: 236 ATLDPTMRRIELPGGGPEVILSDTVGFISDLPTELVAAFRATLEEVLAADLIVHVRDISH 295
Query: 369 PDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER-------VTEEYDLLISA 421
P+ Q + V L+ L + + I + + V NK+D + R E+ +SA
Sbjct: 296 PESEAQARDVRTILESLGVRDSIPQ--IEVWNKIDKLDDETRQAVLTRAARHEHVQALSA 353
Query: 422 TRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIRE 472
G G+++L + + T ++ +R G + WL + + + R+
Sbjct: 354 VTGEGMSELVGVITSAMTDTTQEAHLHLRFDE-GRKRAWLYERGLIEDERQ 403
>gi|337290957|ref|YP_004629978.1| GTPase [Corynebacterium ulcerans BR-AD22]
gi|334699263|gb|AEG84059.1| GTPase [Corynebacterium ulcerans BR-AD22]
Length = 515
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 176/341 (51%), Gaps = 25/341 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G VVD D ++ G G + LK V T V L Q
Sbjct: 115 AALAETAGSEVVDMLYQKRDKPDPGTYIGSGKVAELKDIVMSTGVDTVVCDGE--LSPGQ 172
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA------ 229
L+ V V DR M+++ IF HAK++E + Q+++A++ YL TR R A
Sbjct: 173 MIALEKALDVKVIDRTMLILDIFAQHAKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAG 232
Query: 230 --TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
N G +++ R L KL+K + +K R++ R++++ P +A
Sbjct: 233 GRAGSNGGVGLRGPGETKIEADRRRLRSDMAKLRKEIAGMKTARDVKRSQRRDSTIPQIA 292
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+ GYTN GK++LI ALT LV + LFATLD TT L + +++ DT+GF+ ++P
Sbjct: 293 IAGYTNAGKSSLINALTGAGVLV-EDALFATLDPTTRRAELADGRSVVFTDTVGFVRHLP 351
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVV 398
T L+E F+ TLE+ + AD+++HVVD S+P L+Q + V+ + + EL+ + ++VV
Sbjct: 352 TQLVEAFRSTLEEVVGADLVLHVVDGSDPFPLEQIKAVNGVISDIVRELKVEAPPEIIVV 411
Query: 399 GNKVDAVPP---GE-RVTEEYDLLISATRGTGLAQLKEKVQ 435
NK+D P E R + + +SA G G+ +L+ +++
Sbjct: 412 -NKIDQADPLILAELRHALDDVVFVSAQEGDGIPELEARIE 451
>gi|319404324|emb|CBI77919.1| GTP-binding protein HflX [Bartonella rochalimae ATCC BAA-1498]
Length = 448
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 152/275 (55%), Gaps = 22/275 (8%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
QQ+ L+ L+ V DR ++++IF A+T+E LQ+ +A L Y + R + T++
Sbjct: 108 QQRNLEKLWNCKVIDRTALILEIFGDRARTKEGVLQVELAHLSY--QKSRLVRSWTHLER 165
Query: 235 TKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVG 283
+G +++ R +L + +++ L + R + R K++R P +A+VG
Sbjct: 166 QRGGTGFLGGPGETQIEADRRLLQNKIISIRRELETVVKTRALHRAKRKRIPHPVIALVG 225
Query: 284 YTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTL 343
YTN GK+TL L+D + L + LFATLD T + +LP+ +L DT+GFISN+PT L
Sbjct: 226 YTNAGKSTLFNHLSDSNVLA-EDMLFATLDPTLRKIVLPHGQTVLLSDTVGFISNLPTHL 284
Query: 344 LEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+ F+ TLE+ + AD+I+HV DVS+PD+ Q V E L L ++ +H++ + NK+D
Sbjct: 285 IAAFRATLEEVIEADLILHVRDVSDPDHYAHAQDVFEILSDLGVDINDTDHIVEIWNKID 344
Query: 404 --------AVPPGERVTEEYDLLISATRGTGLAQL 430
+ + L+ISA G GL+QL
Sbjct: 345 TLDQHALGVLQTNSKKMLNSALMISALTGKGLSQL 379
>gi|397654217|ref|YP_006494900.1| GTPase [Corynebacterium ulcerans 0102]
gi|393403173|dbj|BAM27665.1| GTPase [Corynebacterium ulcerans 0102]
Length = 540
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 176/341 (51%), Gaps = 25/341 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G VVD D ++ G G + LK V T V L Q
Sbjct: 140 AALAETAGSEVVDMLYQKRDKPDPGTYIGSGKVAELKDIVMSTGVDTVVCDGE--LSPGQ 197
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA------ 229
L+ V V DR M+++ IF HAK++E + Q+++A++ YL TR R A
Sbjct: 198 MIALEKALDVKVIDRTMLILDIFAQHAKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAG 257
Query: 230 --TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
N G +++ R L KL+K + +K R++ R++++ P +A
Sbjct: 258 GRAGSNGGVGLRGPGETKIEADRRRLRSDMAKLRKEIAGMKTARDVKRSQRRDSTIPQIA 317
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+ GYTN GK++LI ALT LV + LFATLD TT L + +++ DT+GF+ ++P
Sbjct: 318 IAGYTNAGKSSLINALTGAGVLV-EDALFATLDPTTRRAELADGRSVVFTDTVGFVRHLP 376
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVV 398
T L+E F+ TLE+ + AD+++HVVD S+P L+Q + V+ + + EL+ + ++VV
Sbjct: 377 TQLVEAFRSTLEEVVGADLVLHVVDGSDPFPLEQIKAVNGVISDIVRELKVEAPPEIIVV 436
Query: 399 GNKVDAVPP---GE-RVTEEYDLLISATRGTGLAQLKEKVQ 435
NK+D P E R + + +SA G G+ +L+ +++
Sbjct: 437 -NKIDQADPLILAELRHALDDVVFVSAQEGDGIPELEARIE 476
>gi|306836304|ref|ZP_07469285.1| GTP-binding protein HflX [Corynebacterium accolens ATCC 49726]
gi|304567824|gb|EFM43408.1| GTP-binding protein HflX [Corynebacterium accolens ATCC 49726]
Length = 502
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 170/323 (52%), Gaps = 31/323 (9%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D +F G G ++ L V +A V L Q L+ V DR M+++ I
Sbjct: 122 DPGTFIGSGKVKELHDIV--EATGADTVVCDGELNPGQLTALERALNTKVIDRTMLILDI 179
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------------LD 240
F HAK++E + Q+++A+L YL+T R N++ G ++
Sbjct: 180 FAQHAKSKEGKAQVSLAQLEYLYTHTRGW--GGNLSRQAGGRAGSNGGVGLRGPGETKIE 237
Query: 241 SKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDD 300
+ R + L+K L +K RE+ R+++Q +A+ GYTN GK++LI A+T+
Sbjct: 238 TDRRRIRTEMAHLRKELRGMKTAREVKRSRRQSSTIAQIAIAGYTNAGKSSLINAMTNAG 297
Query: 301 SLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADII 360
LV + LFATLD TT L + ++++ DT+GF+ ++PT L+E FK TLE+ + ADI+
Sbjct: 298 VLV-EDALFATLDPTTRRASLADGRQVVFTDTVGFVRHLPTQLVEAFKSTLEEVLAADIM 356
Query: 361 IHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVVGNKVDAVPP-----GERVTE 413
+HVVD S+P L+Q + V++ + + E E+ ++V+ NK+D P V +
Sbjct: 357 LHVVDGSDPFPLKQIEAVNKVIYDIVSETGEQAPPEIIVI-NKIDQADPLVLAELRHVLD 415
Query: 414 EYDLL-ISATRGTGLAQLKEKVQ 435
D++ +SA G G+ +L +V+
Sbjct: 416 HEDVVYVSARTGEGIDELSARVE 438
>gi|219130091|ref|XP_002185207.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403386|gb|EEC43339.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 415
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 185/367 (50%), Gaps = 41/367 (11%)
Query: 106 TRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVF 165
T D L E + L+ + G +V L + +++ G G ++ + +++ T VF
Sbjct: 2 TLDESLIEMRELIKT-AGLELVGEVTQRLNDVNPRTYIGSGKVKEAEEKMKEYDCCTIVF 60
Query: 166 VSVDVLKLHQQKMLQDLF--------------QVPVFDRYMIVIQIFKAHAKTREARLQI 211
+ L QQK L++ F ++ V DR +++ IF HAKTRE +LQ+
Sbjct: 61 DAE--LSPGQQKSLENAFNKESLQNDFLFQGGEIKVIDRTALILDIFAQHAKTREGKLQV 118
Query: 212 AIA-------ELPYLWTRYRTIEDATNMNI---TKGFLDSKRMVLMEREQKLKKALNKLK 261
+A L +WT A + + + L+ + ++ +R LK+ ++ ++
Sbjct: 119 DLALHEYRKPRLTRMWTHLERQSGAGGVGLRGPGESQLEIDKRLVRDRIITLKQKIDDVQ 178
Query: 262 GQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGML 321
QR M R ++R P +++VGYTN GK++++ LT ++ + LFATLD TT + L
Sbjct: 179 KQRAMHRRGRERTGLPILSLVGYTNAGKSSMLNYLTKA-GVMAESMLFATLDPTTRKVKL 237
Query: 322 PN---RLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHV 378
P +L DT+GFI +PT L+ F+ TLE+ AD++IHV+DVSNP + +Q+Q V
Sbjct: 238 PGYKTHPEVLLTDTVGFIQKLPTHLVAAFRATLEEVQEADVLIHVIDVSNPTWRKQEQSV 297
Query: 379 DETLQHLELEEKILEHVLVVGNKVDAVPPGE-------RVTEEYDLLISATRGTGLAQLK 431
L +E +K + VL NK+D + P E E++ + +SA G G+
Sbjct: 298 RSVLADIEASDKPMVRVL---NKIDLLDPVEADELRCQAALEDFTVAVSALEGDGMQDFV 354
Query: 432 EKVQDMI 438
V+D +
Sbjct: 355 SVVEDAM 361
>gi|147678455|ref|YP_001212670.1| GTPase [Pelotomaculum thermopropionicum SI]
gi|146274552|dbj|BAF60301.1| GTPase [Pelotomaculum thermopropionicum SI]
Length = 434
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 158/304 (51%), Gaps = 17/304 (5%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D + G+G + R +F L Q + L+++ V DR +++ I
Sbjct: 69 DPATLLGRGKASEIAALCRNSGAGLVIFDRE--LTPAQARNLEEITGAKVIDRTQLILDI 126
Query: 198 FKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMER 249
F A+TRE RLQ+ +A+L YL R R + L+ R + R
Sbjct: 127 FARRARTREGRLQVELAQLSYLLPRLTGLGGQLSRLGGGIGTRGPGETKLEMDRRRVRRR 186
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
LKK + +++ +R+++R ++ FP VA+VGYTN GK+TL+K LT D LV ++LF
Sbjct: 187 IAALKKEIKEVRERRDLLRRNRKEVPFPLVAIVGYTNAGKSTLLKKLTGADVLV-EDKLF 245
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T +LP+ IL DT+GFI N+P L+ F+ TLE+ M AD+++HVVD S+P
Sbjct: 246 ATLDPVTRRVVLPDNETILLTDTVGFIQNLPHHLVAAFRATLEEVMEADLLLHVVDASHP 305
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD---LLISATRGTG 426
+Q V+E L L K L ++V NK D +P + E+ + +SA +G G
Sbjct: 306 YMEEQIGAVNEVLASLGAAGKPL---VMVYNKADLLPDAKFFREKSSPPAVAVSALKGWG 362
Query: 427 LAQL 430
+ L
Sbjct: 363 MEDL 366
>gi|255654837|ref|ZP_05400246.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-23m63]
gi|296449580|ref|ZP_06891357.1| GTP-binding protein HflX [Clostridium difficile NAP08]
gi|296878097|ref|ZP_06902112.1| GTP-binding protein HflX [Clostridium difficile NAP07]
gi|296261644|gb|EFH08462.1| GTP-binding protein HflX [Clostridium difficile NAP08]
gi|296430850|gb|EFH16682.1| GTP-binding protein HflX [Clostridium difficile NAP07]
Length = 427
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 178/336 (52%), Gaps = 21/336 (6%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G VV S I + S D + GKG +E ++ D+ + + D L Q + ++++
Sbjct: 42 GAEVVGSLIQNKHSIDAAYYIGKGKVEEIR--AYSDSLDATLVIFNDELSGAQIRNIENV 99
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA---TNMNI-TKGF 238
V DR +++ IF A ++E +LQ+ +A+L Y R + T I T+G
Sbjct: 100 VGRKVIDRTTLILDIFAQRALSKEGKLQVELAQLKYRLPRLYGMGGEMSRTGAGIGTRGP 159
Query: 239 LDSKRMV----LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ K + ++ + +++ L ++K RE R K+ + P VA+VGYTN GK+TL+
Sbjct: 160 GEQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSNIPIVALVGYTNAGKSTLLN 219
Query: 295 ALT-------DDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
L + + ++ LFATLDVT + +LPN+ L VDT+GF+S +P L+E F
Sbjct: 220 ELIKTHKDYEQEKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDTVGFVSKLPHDLVEAF 279
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP 407
K TLE+ AD+I+HV+D +N Y QK + L+ L + +K +H+LV NKVD +
Sbjct: 280 KATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVNDK--KHILVY-NKVDKLEL 336
Query: 408 GERVTEEYDLL-ISATRGTGLAQLKEKVQDMILKAT 442
+ D++ ISA +G + +L ++ +++ T
Sbjct: 337 DIYPKSQEDIVYISAKQGINMDKLLNMIEIALMENT 372
>gi|119357534|ref|YP_912178.1| HSR1-like GTP-binding protein [Chlorobium phaeobacteroides DSM 266]
gi|119354883|gb|ABL65754.1| GTP-binding protein HflX [Chlorobium phaeobacteroides DSM 266]
Length = 434
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 196/382 (51%), Gaps = 33/382 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+ S I D SF GKG ++ L V+ +A + + D L Q
Sbjct: 37 AFLADTAGADVLMSIIQEKKQRDPASFLGKGKVDELAVFVKENA--VDIVICDDDLTPVQ 94
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNIT 235
+ L+ + V DR +++QIF A++ +A++Q+ +A+L Y+ R T+++
Sbjct: 95 ARNLERALECKVIDRTGLILQIFAIRAQSSQAKIQVELAQLEYMLPRLSG--QWTHLSKQ 152
Query: 236 KGFLDSK----------RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYT 285
KG + SK R ++ R LK+ L ++ Q + + R P VA+VGYT
Sbjct: 153 KGGIGSKGPGETQIETDRRLVRNRISLLKRKLREVLLQHDT--QTRGRLIIPRVALVGYT 210
Query: 286 NCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLE 345
N GK+TL+ L + N+LFATLD T L +L DT+GFI +P L+E
Sbjct: 211 NAGKSTLMNILCPEAEAFAENRLFATLDTKTRRLELKINKLVLLSDTVGFIRKLPHHLVE 270
Query: 346 PFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV 405
FK TL++ + AD ++HV+DVS+P + +Q V +TL+ L +E ++++ V NK+DA+
Sbjct: 271 SFKSTLDEVLQADFLLHVIDVSHPAFEEQMVVVRDTLRELGVEH---DNIIDVFNKIDAL 327
Query: 406 P-PGE----RVTEEYDLLISATRGTGLAQLKEKVQDMI-LKATGRKNITMRVRSGGSEYQ 459
PG R+ + +SA RG +A LKE + D + L RK +R+ S Y+
Sbjct: 328 EDPGALGALRMKYPEAVFVSAARGLNIAVLKEIISDHVALDYRERK-----IRTHVSNYK 382
Query: 460 ---WLMKHTAVSNIREDDTSAE 478
+L +HT V + R D E
Sbjct: 383 LIGYLYEHTEVVSKRYLDEDVE 404
>gi|340361956|ref|ZP_08684363.1| GTP-binding protein HflX [Neisseria macacae ATCC 33926]
gi|339888053|gb|EGQ77548.1| GTP-binding protein HflX [Neisseria macacae ATCC 33926]
Length = 396
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 180/366 (49%), Gaps = 29/366 (7%)
Query: 98 GKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKS---FFGKGNLELLKRQ 154
G R T L E+ LV++ G V+ T DK F G G E L
Sbjct: 32 GANEVRERTFQTTLDEAAELVAAAGGELVLRETA----KRDKAHTAYFVGTGKAEELAAA 87
Query: 155 VRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIA 214
V+ AVF L Q++ L+ + Q V DR +++ IF A+++E +LQ+ +A
Sbjct: 88 VKLHDIGLAVFNHE--LTPTQERNLEKILQCRVLDRVGLILAIFAKRAQSQEGKLQVELA 145
Query: 215 ELPYLWTR----YRTIEDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREM 266
+L +L R Y ++ KG L++ R ++ ++ LKK L ++K QR
Sbjct: 146 QLNHLSGRLVRGYGHLQSQKGGIGLKGPGETQLETDRRLIGQKITALKKQLVQVKKQRAT 205
Query: 267 MRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLR 326
R + + T A+VGYTN GK++L LT D L ++QLFATLD T L
Sbjct: 206 RRKSRMEGRLKTFAIVGYTNAGKSSLFNRLTKADVLA-KDQLFATLDTTARRLFLSQEAG 264
Query: 327 ILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLE 386
++ DT+GF+ ++P L+ F TLE+ LAD+++HVVD SNPD+ +Q V+ L+ +
Sbjct: 265 VILTDTVGFVRDLPHKLVSAFSATLEETALADVLLHVVDASNPDFERQMDDVNAVLEEIG 324
Query: 387 LEEKILEHVLVVGNKVDAVPPGER--------VTEEYDLLISATRGTGLAQLKEKVQDMI 438
+E LVV NK+D +P G R + IS T+ GL L+E + +
Sbjct: 325 ADEV---PQLVVYNKIDLLPEGVRDAGVLRDNSGRAVGVNISVTKSLGLDALREAMIERA 381
Query: 439 LKATGR 444
L+ G+
Sbjct: 382 LENGGK 387
>gi|89068178|ref|ZP_01155588.1| GTP-binding protein HflX [Oceanicola granulosus HTCC2516]
gi|89046095|gb|EAR52153.1| GTP-binding protein HflX [Oceanicola granulosus HTCC2516]
Length = 430
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 187/368 (50%), Gaps = 28/368 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD-VLKLHQQKMLQDLFQ 184
V+ + ++ L FG G + LK++++ + A V VD + QQ+ L+ +
Sbjct: 52 VIGAEVVRLQQVHPGHLFGTGKIAELKQRLKAE---EAELVLVDGPVSPVQQRNLEKEWG 108
Query: 185 VPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------ 238
V + DR ++++IF A+TRE LQ+ +A L Y R R + T++ +G
Sbjct: 109 VKLLDRTGLILEIFSDRARTREGVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGG 166
Query: 239 -----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLI 293
+++ R + E+ +L+K L K+ R + R + + FP VA+VGYTN GK+TL
Sbjct: 167 PGETQIEADRRAIDEQLARLRKQLEKVVKTRTLHRASRAKVPFPIVALVGYTNAGKSTLF 226
Query: 294 KALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLED 353
LT + + ++ LFATLD T + LP+ ++ DT+GFIS++PT L+ F+ TLE+
Sbjct: 227 NRLTGAEVMA-KDMLFATLDPTMRKVELPSGQEVILSDTVGFISDLPTELVAAFRATLEE 285
Query: 354 AMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER--- 410
+ AD+I+HV DV++ + +Q + V L + + E +L V NK+D +PP ER
Sbjct: 286 VLDADLILHVRDVAHAETEEQAEDVRTILSGIGVGEDA--PLLEVWNKIDLLPPEEREGR 343
Query: 411 ---VTEEYDLL-ISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTA 466
D+ +SA G GL L V + + R + + G WL +
Sbjct: 344 ATQAARRDDVFAVSALEGIGLDPLLAAVSARVSEPRSRDVLHL-GHEDGRRRAWLFEQGI 402
Query: 467 VSNIREDD 474
VS+ DD
Sbjct: 403 VSDETRDD 410
>gi|92117387|ref|YP_577116.1| HSR1-like GTP-binding protein [Nitrobacter hamburgensis X14]
gi|91800281|gb|ABE62656.1| GTP-binding protein HflX [Nitrobacter hamburgensis X14]
Length = 444
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 201/411 (48%), Gaps = 33/411 (8%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D L E+ L +I V + + ++ GKG +E L + + A V
Sbjct: 36 DARLDEAAGLARAID-LDVAKAIAAQVTQIRPATYLGKGKVEELTGLITTEG---ADLVV 91
Query: 168 VDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI 226
+D L QQ+ L+ + V DR ++++IF AKT+E LQ+ +A L Y R R +
Sbjct: 92 MDCALSPIQQRNLEKAWSTKVLDRTGLILEIFGRRAKTKEGALQVELAHLNY--QRSRLV 149
Query: 227 EDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQK 275
T++ +G +++ R ++ +R +L+ L K++ R + R +QR
Sbjct: 150 RSWTHLERQRGGFGFMGGPGETQIEADRRLIGDRIVRLENELKKVQATRRLHRAGRQRVP 209
Query: 276 FPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGF 335
+ VA+VGYTN GK+TL LT + + + LFATLD T LP+ + + DT+GF
Sbjct: 210 YRVVALVGYTNAGKSTLFNRLTRAE-VQAADMLFATLDPTLRALALPHGGKAMLSDTVGF 268
Query: 336 ISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV 395
ISN+PT L+ F+ TLE+ M AD+I+HV D+S+ D Q+ V+ L+ L ++ +
Sbjct: 269 ISNLPTQLVAAFRATLEEVMEADVILHVRDISHEDAEAQQHDVEAVLRQLGIDPGHGARI 328
Query: 396 LVVGNKVDAVPPGE----------RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRK 445
L V NK+D + R E L+SA G GL L ++D + A R
Sbjct: 329 LEVWNKIDRFDADQRENLENIAVRRSAEVPCFLVSAETGEGLDTLLAAIEDRL--AATRT 386
Query: 446 NITMRV-RSGGSEYQWLMKHTAVSNIREDDTSAEHLL-LDVVMTDVIMNKF 494
+ + V S G+ WL +++ V D E + +D D+++N++
Sbjct: 387 TLDLSVDASDGAAISWLHRNSEVLVKELRDGRYEMTVRVDETKRDILVNRY 437
>gi|226493766|ref|NP_001148067.1| GTP-binding protein hflX precursor [Zea mays]
gi|195615598|gb|ACG29629.1| GTP-binding protein hflX [Zea mays]
gi|195656523|gb|ACG47729.1| GTP-binding protein hflX [Zea mays]
gi|413920539|gb|AFW60471.1| GTP-binding protein hflX [Zea mays]
Length = 552
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 190/385 (49%), Gaps = 30/385 (7%)
Query: 74 RDEAQTGALGTDH-------QVFVVQPFIKWGKKMKRNTTRDFMLAES-KAL--VSSIQG 123
R E + A G D ++F + ++ G + KR F + ES K L ++ G
Sbjct: 109 RQEEEEAAAGQDRFKLINGKEIFQEKAYL-VGVECKRTGGNLFGIEESLKELEQLADTAG 167
Query: 124 WRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLF 183
VV ST L + + +++ G G + ++ ++ V V + D L Q + L+ F
Sbjct: 168 LLVVGSTYQKLSTPNPRTYIGSGKVSEIRTAIQA-LDVETVILD-DELSPGQLRNLEKSF 225
Query: 184 --QVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWTRYRTIEDATNMNI 234
V V DR +++ IF A T EA LQ+ +A++ Y +W+ +
Sbjct: 226 GGSVRVCDRTALILDIFNQRAATHEASLQVTLAQMEYQLPRLTKMWSHLERQAGGQVKGM 285
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ ++ + +L + L+K L ++ R++ RN++Q P V++VGYTN GK+TL+
Sbjct: 286 GEKQIEVDKRILRTQISALRKELESVRKHRKLYRNRRQSVPIPVVSLVGYTNAGKSTLLN 345
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT D L ++LFATLD TT ++ N L DT+GFI +PT L+ F+ TLE+
Sbjct: 346 RLTGADVLA-EDKLFATLDPTTRRVLMKNGTEFLLTDTVGFIQKLPTMLVAAFRATLEEI 404
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEE 414
+ +I+H+VD+S+P QQ V+ L+ L++E LVV NK+D V EE
Sbjct: 405 SESSVIVHLVDISHPLAQQQIDAVERVLKELDVESI---PKLVVWNKIDNTDEPLSVKEE 461
Query: 415 YD----LLISATRGTGLAQLKEKVQ 435
+ ISA G GL L VQ
Sbjct: 462 AQKQGIICISAMNGDGLEDLCNAVQ 486
>gi|78066576|ref|YP_369345.1| small GTP-binding protein [Burkholderia sp. 383]
gi|77967321|gb|ABB08701.1| GTP-binding protein HflX [Burkholderia sp. 383]
Length = 396
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 177/339 (52%), Gaps = 28/339 (8%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E +L++S G R + S D K F G G E L+ + DA + + L
Sbjct: 26 EELSLLASSAGARPAVTLTGRRSSPDAKMFIGSGKAEELR--LACDAHNVEIVIFNHALA 83
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
QQ+ L+ V DR +++ IF A++ E +LQ+ +A+L YL TR I T++
Sbjct: 84 PAQQRNLEQALNRRVVDRTSLILDIFAQRARSHEGKLQVELAQLQYLSTRL--IRAWTHL 141
Query: 233 NITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
KG L++ R ++ ER + LK L++L+ Q R ++ R +V++V
Sbjct: 142 ERQKGGIGLRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSGTMSVSLV 201
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPT 341
GYTN GK+TL ALT + +QLFATLD T+ L + + +I+ DT+GFI +P
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAA-DQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPH 260
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
L+ F+ TLE+ + AD+++HVVD S+ L+Q + V+ L E+ + VLV NK
Sbjct: 261 QLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLH--EIGADTIRQVLVF-NK 317
Query: 402 VDAVPP----GERVT-EEYD----LLISATRGTGLAQLK 431
+DAVP G+ V +EY + +SA G GL L+
Sbjct: 318 IDAVPELAARGDAVERDEYGNISRVFLSARTGQGLDTLR 356
>gi|384515870|ref|YP_005710962.1| GTPase [Corynebacterium ulcerans 809]
gi|334697071|gb|AEG81868.1| GTPase [Corynebacterium ulcerans 809]
Length = 515
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 176/341 (51%), Gaps = 25/341 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G VVD D ++ G G + LK V T V L Q
Sbjct: 115 AALAETAGSEVVDMLYQKRDKPDPGTYIGSGKVAELKDIVMSTGVDTVVCDGE--LSPGQ 172
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA------ 229
L+ V V DR M+++ IF HAK++E + Q+++A++ YL TR R A
Sbjct: 173 MIALEKALDVKVIDRTMLILDIFAQHAKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAG 232
Query: 230 --TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
N G +++ R L KL+K + +K R++ R++++ P +A
Sbjct: 233 GRAGSNGGVGLRGPGETKIEADRRRLRSDMAKLRKEIAGMKTARDVKRSQRRDSTIPQIA 292
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+ GYTN GK++LI ALT LV + LFATLD TT L + +++ DT+GF+ ++P
Sbjct: 293 IAGYTNAGKSSLINALTGAGVLV-EDALFATLDPTTRRAELADGRSVVFTDTVGFVRHLP 351
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVV 398
T L+E F+ TLE+ + AD+++HVVD S+P L+Q + V+ + + EL+ + ++VV
Sbjct: 352 TQLVEAFRSTLEEVVGADLVLHVVDGSDPFPLEQIKAVNGVISDIVRELKVEAPPEIIVV 411
Query: 399 GNKVDAVPP---GE-RVTEEYDLLISATRGTGLAQLKEKVQ 435
NK+D P E R + + +SA G G+ +L+ +++
Sbjct: 412 -NKIDQADPLILAELRHALDDVVFVSAQEGDGIPELEARIE 451
>gi|410615768|ref|ZP_11326779.1| GTPase, HflX [Glaciecola psychrophila 170]
gi|410164689|dbj|GAC40668.1| GTPase, HflX [Glaciecola psychrophila 170]
Length = 429
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 168/310 (54%), Gaps = 21/310 (6%)
Query: 104 NTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTA 163
N+ D + E + LVSS G +D S S + F G G E + VR A+
Sbjct: 22 NSKEDLL--ELQLLVSSA-GVNAIDVVTCSRQSPQARYFVGSGKAEEIANAVR--AQQAD 76
Query: 164 VFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY 223
V + L Q++ L+ L Q V DR +++ IF A+T E +LQ+ +A+L ++ TR
Sbjct: 77 VVIFNHSLSPSQERNLEQLCQCRVLDRTGLILDIFAQRARTHEGKLQVELAQLRHMSTRL 136
Query: 224 RTIEDATNMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQR 273
+ T+++ KG L++ R +L R + +++ L+K++ QRE R + R
Sbjct: 137 --VRGWTHLDKQKGGIGLRGPGESQLETDRRLLRARLKAIQRRLDKVQKQREQGRRSRIR 194
Query: 274 QKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTI 333
+ PTV++VGYTN GK+TL ++T+ V +QLFATLD T + L N + DT+
Sbjct: 195 AEIPTVSLVGYTNAGKSTLFNSMTESAVYVA-DQLFATLDPTLRKIQLQNVGSAILADTV 253
Query: 334 GFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILE 393
GFI ++P L+ FK TL++ A++++HVVD S+ + + + V+E L+ ++ E
Sbjct: 254 GFIRHLPHDLIAAFKATLQETQQANLLLHVVDYSDDQFQENIEQVNEVLEEIDANEI--- 310
Query: 394 HVLVVGNKVD 403
L+V NK+D
Sbjct: 311 QQLMVCNKID 320
>gi|378823403|ref|ZP_09846043.1| GTP-binding protein HflX [Sutterella parvirubra YIT 11816]
gi|378597774|gb|EHY31022.1| GTP-binding protein HflX [Sutterella parvirubra YIT 11816]
Length = 396
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 166/318 (52%), Gaps = 28/318 (8%)
Query: 138 DKKSFFGKGNLELL---KRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIV 194
D +F G G +E L R+ + D V V L QQ+ ++ ++PV DR ++
Sbjct: 48 DPATFLGSGKIEELGELAREAKAD-----VVVFDTALSAAQQRNIERAIELPVLDRTTLI 102
Query: 195 IQIFKAHAKTREARLQIAIAELPYL-------WT---RYRTIEDATNMNITKGFLDSKRM 244
++IF+A AK+RE RLQ+ +A L +L WT R R T K +RM
Sbjct: 103 LEIFRARAKSREGRLQVELARLEHLSTRLVRGWTHLERQRGGLGKTGGPGEKQIELDRRM 162
Query: 245 VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVP 304
+ + R ++L++ L KL QR R + R TV++VGYTN GK+TL LT S
Sbjct: 163 IGV-RVKQLREQLKKLARQRGTQRRARTRGDTLTVSLVGYTNAGKSTLFNRLTRAKSYAA 221
Query: 305 RNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
+QLFATLD T + + ++ DT+GFI +P L+E FK TL++ + AD+++HVV
Sbjct: 222 -DQLFATLDTTARRFWVNDEETVVASDTVGFIRGLPHQLVEAFKSTLDETVHADLLLHVV 280
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD-----LLI 419
D ++P +Q + V+ L+ +E ++ V++V NK+D + D + +
Sbjct: 281 DAASPVREEQIREVNLVLEEIEADDV---PVIIVYNKIDRTTHEPEIVRHPDGTPKAVFV 337
Query: 420 SATRGTGLAQLKEKVQDM 437
SA G G+ L+E V +
Sbjct: 338 SALTGAGMDLLREAVAEF 355
>gi|219849958|ref|YP_002464391.1| GTP-binding proten HflX [Chloroflexus aggregans DSM 9485]
gi|219544217|gb|ACL25955.1| GTP-binding proten HflX [Chloroflexus aggregans DSM 9485]
Length = 461
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 177/349 (50%), Gaps = 39/349 (11%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLE---LLKRQVRGDARVTAVFVSVDVLK 172
AL++ VV L K F G G ++ L+ Q + D + V D L
Sbjct: 60 ALLAKTADLEVVGRIFQRLPEPQPKFFIGPGKVKEVAALREQTQAD-----LIVFDDELS 114
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYR-------- 224
Q + L++ Q V DR +++ IF HA+T E RLQ+ +A+ YL R R
Sbjct: 115 PAQIRNLEEELQTQVIDRTALILDIFARHARTHEGRLQVELAQYQYLLPRLRRQWTHLER 174
Query: 225 -----TIEDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQK 275
A M +G L+ R ++ R LK+ L + RE+ R ++++
Sbjct: 175 QTGTSGGTSAGGMVGLRGPGETQLEIDRRLIERRIAWLKEQLADVHRHRELYRQRRRQTG 234
Query: 276 FPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGF 335
P +A+VGYTN GK+TL+ A+T D L ++LFATLD TT + +LP L DT+GF
Sbjct: 235 VPIIALVGYTNAGKSTLLNAMTGADVLA-EDKLFATLDPTTRQVLLPGNTVALMTDTVGF 293
Query: 336 ISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV 395
I +P L+ F+ TLE+ AD+++HVVDV++ + + Q V++TL+ L+++ K +
Sbjct: 294 IQKLPPQLIAAFRATLEEIEEADLLLHVVDVTHRNAQEHAQTVEQTLRELKVDHK---PI 350
Query: 396 LVVGNKVD----AVPPG-ERVTEEYDL-----LISATRGTGLAQLKEKV 434
L V NK+D A G +++ E L +SA RG GL L E++
Sbjct: 351 LTVLNKIDLLEGATAEGIDQIAAEMGLPGDIVAVSARRGWGLQTLGERI 399
>gi|336325751|ref|YP_004605717.1| putative GTP-binding protein [Corynebacterium resistens DSM 45100]
gi|336101733|gb|AEI09553.1| putative GTP-binding protein [Corynebacterium resistens DSM 45100]
Length = 490
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 175/345 (50%), Gaps = 27/345 (7%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E A ++ G + D T D ++ G+G ++ L+ V T ++ L
Sbjct: 89 EELAALAETAGSEIADITYQKRDKPDAGTYIGRGKVDELRHIVVETGADT--VIADGELS 146
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
Q L+ V V DR M+++ IF HAK++E + Q+A+A++ YL TR R A +
Sbjct: 147 PGQMIALEKALDVKVIDRTMLILDIFAQHAKSKEGKAQVALAQMEYLITRVRGWGGALSR 206
Query: 233 NITKGF---------------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
+++ R L +L+K + +K R++ R ++
Sbjct: 207 QAGGRAGANGGVGLRGPGETKIEADRRRLRADMARLRKEIASMKTSRDIKRERRDSAAIA 266
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
VA+ GYTN GK++LI ALT LV + LFATLD TT L + +++ DT+GF+
Sbjct: 267 QVAIAGYTNAGKSSLINALTGAGVLV-EDALFATLDPTTRRAELADGRAVIFTDTVGFVR 325
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV-- 395
++PT L+E F+ TLE+ M AD+++HVVD S+P L+Q V++ + E+ E+ EH
Sbjct: 326 HLPTQLVEAFRSTLEEVMAADVVLHVVDGSDPFPLEQIVAVNKVIG--EIVEETGEHAPP 383
Query: 396 -LVVGNKVDAVPPGERVTEEYDL----LISATRGTGLAQLKEKVQ 435
++V NK+D P + L +SA G G+++L+ +++
Sbjct: 384 EILVVNKIDKADPLVLAELRHRLDDVVFVSAHSGEGISELETRLE 428
>gi|392964199|ref|ZP_10329620.1| GTP-binding proten HflX [Fibrisoma limi BUZ 3]
gi|387847094|emb|CCH51664.1| GTP-binding proten HflX [Fibrisoma limi BUZ 3]
Length = 416
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 201/372 (54%), Gaps = 36/372 (9%)
Query: 99 KKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGD 158
+K + T++++ + A ++ G R V + + L D ++F GKG LE ++ + +
Sbjct: 19 QKQTADQTKEYL--DELAFLAETSGIRTVKTFVQKLERPDTRTFVGKGKLEEIQTYITDN 76
Query: 159 ARVTAVFVSVDVLKLHQQKMLQDLF-QVPVFDRYMIVIQIFKAHAKTREARLQIAIAELP 217
T +F D L Q + L+ F ++ V DR ++++ IF A+T +AR+Q+ +A+
Sbjct: 77 PVDTIIFD--DDLTPAQVRNLEGEFKEIKVLDRSLLILNIFSMRAQTAQARVQVELAQYQ 134
Query: 218 YLWTRYRTIEDATNMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMM 267
YL+ R + T+++ KG L++ R ++ +R LK+ L K+ Q +
Sbjct: 135 YLYPRLTRM--WTHLSRQKGGVGMRGPGESELETDRRIVKDRIAFLKEKLEKIDKQSQTR 192
Query: 268 RNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRI 327
R K+R + VA+VGYTN GK+TL++ L + + N+LFAT+D T + +L N +
Sbjct: 193 R--KERDRLARVALVGYTNVGKSTLMRTLAKAE-VFAENKLFATVDSTVRKVVLGN-IPF 248
Query: 328 LYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLEL 387
L DT+GFI +PTTL+E FK TL++ ADI++HVVDVS+P + + + V TL +
Sbjct: 249 LLTDTVGFIRKLPTTLIESFKSTLDEVREADILLHVVDVSHPSFEEHIEVVSSTLSDIGA 308
Query: 388 EEKILEHVLVVGNKVDAVPPGERVT------EEYDLLISATRGTGLAQLK-----EKVQD 436
+K ++V NK+D P E +E ++ ++ + T L LK +K +
Sbjct: 309 ADK---PTILVFNKIDQFEPKEDSAYELVQEQEGEVPVAVRKQTALQYLKKTYLTQKAEH 365
Query: 437 MI-LKATGRKNI 447
++ + A R+NI
Sbjct: 366 VVFISAQNRENI 377
>gi|254876863|ref|ZP_05249573.1| protease, GTP-binding subunit [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842884|gb|EET21298.1| protease, GTP-binding subunit [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 435
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 166/296 (56%), Gaps = 24/296 (8%)
Query: 126 VVDSTIISLLSF-----DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQ 180
D ++ L F D K F G G +E++K + D + V L Q++ ++
Sbjct: 39 AADKVVLESLDFNHPEPDIKYFCGMGKMEMIKN--KRDELEADLVVFNHPLSPSQERNIE 96
Query: 181 DLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-- 238
+ + DR ++++IF AKT E +LQ+ +A+L Y TR ++ T++ KG
Sbjct: 97 KFLECKIMDRTRLILEIFSLRAKTHEGKLQVELAQLNYQSTR--LVKGWTHLERQKGGIG 154
Query: 239 ---------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGK 289
L+ R ++ +R +++ + L K+K R++ R+ +++ PT++ VGYTN GK
Sbjct: 155 VRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNNIPTISFVGYTNAGK 214
Query: 290 TTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKV 349
+TL +T+ D L ++QLFATLD T + ++P +++ DT+GFI N+P L+E F
Sbjct: 215 STLFNKITNADVLA-KDQLFATLDPTLRKVIVPKLGEVIFSDTVGFIKNLPHDLVEAFHA 273
Query: 350 TLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV 405
TLE+A+ +D+++HV+D ++ DY + V++ L+ + + +K ++ V NK+D +
Sbjct: 274 TLEEAIESDLLVHVIDYADEDYKSYIEQVEKVLKEIGIADK---EMICVYNKIDKI 326
>gi|359419304|ref|ZP_09211262.1| GTP-binding protein HflX [Gordonia araii NBRC 100433]
gi|358244711|dbj|GAB09331.1| GTP-binding protein HflX [Gordonia araii NBRC 100433]
Length = 489
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 176/358 (49%), Gaps = 43/358 (12%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G +V+D+ I S D ++ G G L+ V T ++ L Q L+ +
Sbjct: 95 GSQVLDAVIQRRSSPDAATYIGSGKAAELRDIVVSTGADT--VIADGELTPAQLTALEKV 152
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNI 234
+V V DR +++ IF HA +RE + Q+A+A++ Y+ R R ++ N
Sbjct: 153 VKVKVIDRTALILDIFAQHATSREGKAQVALAQMEYMLPRLRGWGESMSRQAGGRAGSNG 212
Query: 235 TKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
G +++ R + ER KL++ + +K R + R ++R PT+ VVGYTN
Sbjct: 213 GVGLRGPGETKIETDRRRIRERMAKLRREIRGMKTARTVKRLDRRRSGVPTITVVGYTNA 272
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GK++L+ A+T LV +N LFATLD TT L + +++ DT+GF+ ++PT L+E F
Sbjct: 273 GKSSLVNAMTGSGVLV-QNALFATLDPTTRRARLDDGREVVFTDTVGFVRHLPTQLVEAF 331
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV---LVVGNKVDA 404
+ TLE+ AD++IHVVD S L Q V L + E L+V NKVDA
Sbjct: 332 RSTLEEVADADLLIHVVDGSETFPLDQVAAVRTVLGEVMTESAASAAPPPELLVVNKVDA 391
Query: 405 V-----------PPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
+ PG + +SA G GL +L E+++ + GR ++ M V
Sbjct: 392 MDELARAELAAALPGA-------VFVSARTGEGLDELFERIRSEV----GRHDVEMYV 438
>gi|381178941|ref|ZP_09887807.1| GTP-binding protein HflX [Treponema saccharophilum DSM 2985]
gi|380769160|gb|EIC03133.1| GTP-binding protein HflX [Treponema saccharophilum DSM 2985]
Length = 425
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 183/365 (50%), Gaps = 49/365 (13%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L+E K LV ++ G + + ++ + GKG E L A + DV
Sbjct: 24 LSELKGLVDTL-GMETLRAVTLTRMDITPAYGMGKGKAEELS--------ALAEEIGADV 74
Query: 171 ------LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIA----ELPYLW 220
L +Q+ + L + P FDR ++++IF A+T+EA LQ+ +A LP L
Sbjct: 75 IIFDFDLDPRKQRNWEKLSKKPSFDRQEVILRIFAQRAQTKEAVLQVELARLEHSLPRLA 134
Query: 221 TRYRTIEDATNMNI-TKGF------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQR 273
Y + N +KG LD++ + E+ + +KK L+ + RE R ++++
Sbjct: 135 HSYGDMARQRGGNFGSKGSGETQLELDTR--AIREKIRLVKKELSAVVRDRETQRKRREK 192
Query: 274 QKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTI 333
PT A+ GYTN GK++L+ ALT D+ V ++LFATLD TT + L N IL DT+
Sbjct: 193 VPVPTCALAGYTNAGKSSLLNALTGADAFV-EDKLFATLDPTTRKLQLANGANILLTDTV 251
Query: 334 GFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILE 393
GFISN+P L+ FK TLE+A A++II V+D S+PD Q + V E L+ + E
Sbjct: 252 GFISNLPHGLVNAFKSTLEEAERANLIIIVIDASDPDAESQYRTVVEVLKEIGAENS--- 308
Query: 394 HVLVVGNKVDAVPPGERVTEEYDLL--------------ISATRGTGLAQLKEKVQDMIL 439
++ NK+D + E + E +L ISA TG A+L EK+ D ++
Sbjct: 309 PRIIALNKIDRI---EEMDEAERILVLSRLEKLFPENVKISAKNRTGFAELSEKICDALM 365
Query: 440 KATGR 444
G+
Sbjct: 366 GTGGK 370
>gi|423082085|ref|ZP_17070680.1| GTP-binding protein HflX [Clostridium difficile 002-P50-2011]
gi|423085689|ref|ZP_17074131.1| GTP-binding protein HflX [Clostridium difficile 050-P50-2011]
gi|357549335|gb|EHJ31182.1| GTP-binding protein HflX [Clostridium difficile 002-P50-2011]
gi|357549606|gb|EHJ31452.1| GTP-binding protein HflX [Clostridium difficile 050-P50-2011]
Length = 427
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 178/336 (52%), Gaps = 21/336 (6%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G VV S I + S D + GKG +E ++ D+ + + D L Q + ++++
Sbjct: 42 GAEVVGSLIQNKHSVDAAYYIGKGKVEEIR--AYSDSLDATLVIFNDELSGAQIRNIENV 99
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA---TNMNI-TKGF 238
V DR +++ IF A ++E +LQ+ +A+L Y R + T I T+G
Sbjct: 100 VGRKVIDRTTLILDIFAQRALSKEGKLQVELAQLKYRLPRLYGMGGEMSRTGAGIGTRGP 159
Query: 239 LDSKRMV----LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ K + ++ + +++ L ++K RE R K+ + P VA+VGYTN GK+TL+
Sbjct: 160 GEQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSNIPIVALVGYTNAGKSTLLN 219
Query: 295 ALT-------DDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
L + + ++ LFATLDVT + +LPN+ L VDT+GF+S +P L+E F
Sbjct: 220 ELIKTHKDYEQEKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDTVGFVSKLPHDLVEAF 279
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP 407
K TLE+ AD+I+HV+D +N Y QK + L+ L + +K +H+LV NKVD +
Sbjct: 280 KATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVNDK--KHILVY-NKVDKLEL 336
Query: 408 GERVTEEYDLL-ISATRGTGLAQLKEKVQDMILKAT 442
+ D++ ISA +G + +L ++ +++ T
Sbjct: 337 DIYPKSQEDIVYISAKQGINMDKLLNMIEIALMENT 372
>gi|328543916|ref|YP_004304025.1| GTP binding protein-like protein [Polymorphum gilvum SL003B-26A1]
gi|326413660|gb|ADZ70723.1| GTP binding protein-like protein [Polymorphum gilvum SL003B-26A1]
Length = 458
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 200/404 (49%), Gaps = 31/404 (7%)
Query: 75 DEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKA--LVSSIQGWRVVDSTII 132
D A TG G + VV+P + + R + ++ S L +I +D TI+
Sbjct: 16 DGAPTGDEGGGARALVVEPVLP--DRPARTHEPEILVGRSPEARLEEAIGLCAAIDLTIV 73
Query: 133 SLL-----SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPV 187
+ L + + G G +E L QV A V V L QQ+ L+ + V
Sbjct: 74 AALIVKISAPRPATLLGTGKVEDLAAQVE--AEEVDVVVVDHALTPIQQRNLERALKTKV 131
Query: 188 FDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF--------- 238
DR ++++IF A A+T+E RLQ+ +A L W + R + T++ +G
Sbjct: 132 IDRTGLILEIFGARARTKEGRLQVDLAHL--TWQKSRLVRSWTHLERQRGGVGFMGGPGE 189
Query: 239 --LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKAL 296
+++ R + ++ +L+K L++++ R++ R K+++ P VA+VGYTN GK+TL L
Sbjct: 190 TQIEADRRQIQDKIMRLEKELDQVRRTRDLHRKKRKKIPQPVVALVGYTNAGKSTLFNRL 249
Query: 297 TDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAML 356
T+ L ++ LFATLD T LP+ ++ DT+GFIS +PT L+ F+ TLE+ +
Sbjct: 250 TEAQVLA-KDLLFATLDPTLRRIKLPHGREVILSDTVGFISELPTHLVAAFRATLEEVLE 308
Query: 357 ADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERV----- 411
AD+I+HV D+++PD Q V TL+ L + ++ V NK+D + R
Sbjct: 309 ADLILHVRDIAHPDTDAQAADVARTLEDLGVGPTTGAPIVEVWNKIDCLDAERRARLLAG 368
Query: 412 -TEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG 454
T+ + +SA G G+ L +++ + + + + V G
Sbjct: 369 QTDSGPVALSALTGEGIGALLARIEAFMAQGDDTFELALPVEEG 412
>gi|419798190|ref|ZP_14323613.1| GTP-binding protein HflX [Neisseria sicca VK64]
gi|385695842|gb|EIG26387.1| GTP-binding protein HflX [Neisseria sicca VK64]
Length = 396
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 180/366 (49%), Gaps = 29/366 (7%)
Query: 98 GKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKS---FFGKGNLELLKRQ 154
G R T L E+ LV++ G V+ T DK F G G E L
Sbjct: 32 GANEVRERTFQTTLDEAAELVAAAGGELVLRETA----KRDKAHTAYFVGTGKAEELAAA 87
Query: 155 VRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIA 214
V+ AVF L Q++ L+ + Q V DR +++ IF A+++E +LQ+ +A
Sbjct: 88 VKLHDIGLAVFNHE--LTPTQERNLEKILQCRVLDRVGLILAIFAKRAQSQEGKLQVELA 145
Query: 215 ELPYLWTR----YRTIEDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREM 266
+L +L R Y ++ KG L++ R ++ ++ LKK L ++K QR
Sbjct: 146 QLNHLSGRLVRGYGHLQSQKGGIGLKGPGETQLETDRRLIGQKITALKKQLAQVKKQRAT 205
Query: 267 MRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLR 326
R + + T A+VGYTN GK++L LT D L ++QLFATLD T L +
Sbjct: 206 RRKSRMEGRLKTFAIVGYTNAGKSSLFNRLTKADVLA-KDQLFATLDTTARRLFLSHEAG 264
Query: 327 ILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLE 386
++ DT+GF+ ++P L+ F TLE+ LAD+++HVVD SNPD+ +Q V+ L+ +
Sbjct: 265 VILTDTVGFVRDLPHKLVSAFSATLEETALADVLLHVVDASNPDFERQMDDVNVVLEEIG 324
Query: 387 LEEKILEHVLVVGNKVDAVPPGER--------VTEEYDLLISATRGTGLAQLKEKVQDMI 438
E LVV NK+D +P G R + IS T+ GL L+E + +
Sbjct: 325 AHEV---PQLVVYNKIDLLPQGVRDAGVLRDNSGRAVGVNISVTKSLGLDALREAMIERA 381
Query: 439 LKATGR 444
L+ G+
Sbjct: 382 LENGGK 387
>gi|126698368|ref|YP_001087265.1| GTP-binding protein, HflX type [Clostridium difficile 630]
gi|255099903|ref|ZP_05328880.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-63q42]
gi|255305792|ref|ZP_05349964.1| putative ATP/GTP-binding protein [Clostridium difficile ATCC 43255]
gi|115249805|emb|CAJ67622.1| putative GTP-binding protein, HflX type [Clostridium difficile 630]
Length = 427
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 178/336 (52%), Gaps = 21/336 (6%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G VV S I + S D + GKG +E ++ D+ + + D L Q + ++++
Sbjct: 42 GAEVVGSLIQNKHSVDAAYYIGKGKVEEIR--AYSDSLDATLVIFNDELSGAQIRNIENV 99
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA---TNMNI-TKGF 238
V DR +++ IF A ++E +LQ+ +A+L Y R + T I T+G
Sbjct: 100 VGRKVIDRTTLILDIFAQRALSKEGKLQVELAQLKYRLPRLYGMGGEMSRTGAGIGTRGP 159
Query: 239 LDSKRMV----LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ K + ++ + +++ L ++K RE R K+ + P VA+VGYTN GK+TL+
Sbjct: 160 GEQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSNIPIVALVGYTNAGKSTLLN 219
Query: 295 ALT-------DDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
L + + ++ LFATLDVT + +LPN+ L VDT+GF+S +P L+E F
Sbjct: 220 ELIKTHKDYEQEKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDTVGFVSKLPHDLVEAF 279
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP 407
K TLE+ AD+I+HV+D +N Y QK + L+ L + +K +H+LV NKVD +
Sbjct: 280 KATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVNDK--KHILVY-NKVDKLEL 336
Query: 408 GERVTEEYDLL-ISATRGTGLAQLKEKVQDMILKAT 442
+ D++ ISA +G + +L ++ +++ T
Sbjct: 337 DIYPKSQEDIVYISAKQGINMDKLLNMIEIALMENT 372
>gi|357009747|ref|ZP_09074746.1| HSR1-like GTP-binding protein [Paenibacillus elgii B69]
Length = 441
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 161/309 (52%), Gaps = 17/309 (5%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F GKG E LK + TA+F L Q + L+ V + DR +++ I
Sbjct: 64 DSKWFIGKGKAEELKAMLEQTGGNTAIFDQE--LSGAQVRNLEQFLDVKIIDRTQLILDI 121
Query: 198 FKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMER 249
F AKTRE +Q+ +A+L YL R R + L++ R + ER
Sbjct: 122 FAQRAKTREGIIQVELAQLSYLLPRLYGQGKNLSRLGGGIGTRGPGETKLETDRRHIRER 181
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
+LK+ L ++ R + R ++++ VA+VGYTN GK+TL++ LT D V NQLF
Sbjct: 182 IAELKRQLQEVVRHRSLHRERRKKTGVFQVALVGYTNAGKSTLLRQLTHADVYV-ENQLF 240
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD+T+ LP + I+ DT+GFI N+P L+ F+ TLE+A AD+I+ VVD S+
Sbjct: 241 ATLDLTSRSLELPGGMEIVVTDTVGFIQNLPHDLVAAFRATLEEACEADLILQVVDSSSE 300
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER---VTEEYDLLISATRGTG 426
Q + VD+ L+ L K E V V NK+D P ++ T+ + ISA R
Sbjct: 301 MMAAQMKVVDQVLEELGAHGK--ERVTVF-NKIDLCSPEQKELLTTDGPFVRISAYREED 357
Query: 427 LAQLKEKVQ 435
L+ L E ++
Sbjct: 358 LSLLVELIE 366
>gi|254974410|ref|ZP_05270882.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-66c26]
gi|255091801|ref|ZP_05321279.1| putative ATP/GTP-binding protein [Clostridium difficile CIP 107932]
gi|255313536|ref|ZP_05355119.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-76w55]
gi|255516221|ref|ZP_05383897.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-97b34]
gi|255649318|ref|ZP_05396220.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-37x79]
gi|260682488|ref|YP_003213773.1| ATP/GTP-binding protein [Clostridium difficile CD196]
gi|260686087|ref|YP_003217220.1| ATP/GTP-binding protein [Clostridium difficile R20291]
gi|306519413|ref|ZP_07405760.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-32g58]
gi|384360067|ref|YP_006197919.1| ATP/GTP-binding protein [Clostridium difficile BI1]
gi|260208651|emb|CBA61408.1| putative ATP/GTP-binding protein [Clostridium difficile CD196]
gi|260212103|emb|CBE02716.1| putative ATP/GTP-binding protein [Clostridium difficile R20291]
Length = 427
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 178/336 (52%), Gaps = 21/336 (6%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G VV S I + S D + GKG +E ++ D+ + + D L Q + ++++
Sbjct: 42 GAEVVGSLIQNKHSVDAAYYIGKGKVEEIR--AYSDSLDATLVIFNDELSGAQIRNIENV 99
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA---TNMNI-TKGF 238
V DR +++ IF A ++E +LQ+ +A+L Y R + T I T+G
Sbjct: 100 VGRKVIDRTTLILDIFAQRALSKEGKLQVELAQLKYRLPRLYGMGGEMSRTGAGIGTRGP 159
Query: 239 LDSKRMV----LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ K + ++ + +++ L ++K RE R K+ + P VA+VGYTN GK+TL+
Sbjct: 160 GEQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSNIPIVALVGYTNAGKSTLLN 219
Query: 295 ALT-------DDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
L + + ++ LFATLDVT + +LPN+ L VDT+GF+S +P L+E F
Sbjct: 220 ELIKTHKDYEQEKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDTVGFVSKLPHDLVEAF 279
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP 407
K TLE+ AD+I+HV+D +N Y QK + L+ L + +K +H+LV NKVD +
Sbjct: 280 KATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVNDK--KHILVY-NKVDKLEL 336
Query: 408 GERVTEEYDLL-ISATRGTGLAQLKEKVQDMILKAT 442
+ D++ ISA +G + +L ++ +++ T
Sbjct: 337 DIYPKSQEDIVYISAKQGINMDKLLNMIEIALMENT 372
>gi|260893470|ref|YP_003239567.1| GTP-binding proten HflX [Ammonifex degensii KC4]
gi|260865611|gb|ACX52717.1| GTP-binding proten HflX [Ammonifex degensii KC4]
Length = 408
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 175/321 (54%), Gaps = 25/321 (7%)
Query: 129 STIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLF--QVP 186
+T++ D G G + +K V + ++ AV + + L Q + L+D F +V
Sbjct: 38 ATVVQRRLPDPHYLLGPGKITEVKELVERE-KIQAVVFNRE-LSPRQVQALEDFFGPEVA 95
Query: 187 VFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGF 238
V+DR ++++IF+ A++RE ++Q+ +A L YL+ R R +
Sbjct: 96 VWDRTQVILEIFRRRAQSREGKIQVELARLTYLYPRLYGLGGTLSRLGGGVGTRGPGETK 155
Query: 239 LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTD 298
L+ R L R +L++ L +++ R+++R +QR P V++VGYTN GK+TL+ AL
Sbjct: 156 LEVLRRALRRRITELRRELEEVRASRDLLRRHRQRSGIPVVSLVGYTNAGKSTLLNALAG 215
Query: 299 DD-SLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLA 357
+ ++ ++LFATLD + +LP+ L DT+GFI ++P L E FK TLE+ A
Sbjct: 216 EGKEVLAEDRLFATLDPVSRRVILPSGRVFLLTDTVGFIKDLPPKLKEAFKATLEELETA 275
Query: 358 DIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD---AVPPGERVTEE 414
D+++HV+D+++P +Q++ V+ L+ L L EK +L V NKVD + P + V
Sbjct: 276 DLLLHVIDLTSPYLDEQQRAVESLLEELGLAEK---PILKVYNKVDRYTGILPADGV--- 329
Query: 415 YDLLISATRGTGLAQLKEKVQ 435
+ISA + L QL +++
Sbjct: 330 ---VISALKKINLDQLLHQIE 347
>gi|357406389|ref|YP_004918313.1| GTP-binding protein HflX [Methylomicrobium alcaliphilum 20Z]
gi|351719054|emb|CCE24728.1| GTP-binding protein HflX [Methylomicrobium alcaliphilum 20Z]
Length = 420
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 183/330 (55%), Gaps = 24/330 (7%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D K F G G LE LK+ + + +F L Q++ L+ +V V DR +++
Sbjct: 49 SPDSKYFIGTGKLEELKQAISEYSADIVLFNHP--LSPSQERNLEKALEVRVVDRNGLIL 106
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMV 245
IF A+T E +LQ+ +A+L +L TR I T++ KG L++ R +
Sbjct: 107 DIFAQRAQTFEGKLQVELAQLRHLSTRL--IRGWTHLERQKGGIGLRGPGETQLETDRRL 164
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR 305
L R +++++ LNK+ QR R+K+++ + P+V++VGYTN GK+TL +T + +
Sbjct: 165 LGVRIKQIQRRLNKVAKQRHQGRSKRKKAEVPSVSLVGYTNAGKSTLFNTMTGAE-IYAA 223
Query: 306 NQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVD 365
+QLFATLD T + +LPN I+ DT+GFI ++P L+ F+ TL++A A++++HV+D
Sbjct: 224 DQLFATLDPTLRQCVLPNNAEIVLADTVGFIRHLPHELVAAFRSTLQEASEANLLLHVID 283
Query: 366 VSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP---PGERVTEEYDLL---I 419
+ D + V++ L+ +E +E L + NK+D +P P +E ++L +
Sbjct: 284 ANAEDRDETIAQVNQVLEDIEADEI---RQLQIFNKIDLLPDIEPHIDRDDEGNVLRVWL 340
Query: 420 SATRGTGLAQLKEKVQDMILKATGRKNITM 449
SA G G+ L + + ++ + R+ +++
Sbjct: 341 SAETGAGIDLLYQVLAEIFASSKVRRQLSL 370
>gi|84496882|ref|ZP_00995736.1| putative ATP/GTP-binding protein [Janibacter sp. HTCC2649]
gi|84383650|gb|EAP99531.1| putative ATP/GTP-binding protein [Janibacter sp. HTCC2649]
Length = 493
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 175/343 (51%), Gaps = 31/343 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V++ + D ++ GKG E L+ V + T + S L Q
Sbjct: 101 AALAETAGAEVLEGVMQRRQKPDTATYLGKGKAEELREIVINEGADTVICDSE--LAPSQ 158
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI- 234
++ L+D+ +V V DR +++ IF HAK+RE + Q+ +A+L YL R R ++ +
Sbjct: 159 RRALEDVVKVKVIDRTALILDIFAQHAKSREGKAQVELAQLQYLLPRLRGWGESMSRQAG 218
Query: 235 ----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
TK LD +R + R KLK+ + +K R+ R ++ P+
Sbjct: 219 GQAAGGQGMGSRGPGETKIELDRRR--INTRVAKLKRDIAGMKTHRDTKRGSRRANAIPS 276
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+ GYTN GK++++ LT LV +NQLFATLD T P+ + DT+GF+ +
Sbjct: 277 VAIAGYTNAGKSSILNRLTGAGVLV-QNQLFATLDPTVRRSETPDGREFTFTDTVGFVRH 335
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+P L+E F+ TLE+ +D+++HVVD S+PD Q V L ++ + ++ V+VV
Sbjct: 336 LPHQLVEAFRSTLEEVAESDLLLHVVDGSHPDPEGQISAVRSVLADVDATD--VKEVIVV 393
Query: 399 GNKVDAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQD 436
NK D + E R E++ +++SA G G+ L + D
Sbjct: 394 -NKAD-IADSEVIDRLRRNEKHVIVVSARTGAGMDALVALIAD 434
>gi|376284945|ref|YP_005158155.1| putative GTP-binding protein [Corynebacterium diphtheriae 31A]
gi|371578460|gb|AEX42128.1| putative GTP-binding protein [Corynebacterium diphtheriae 31A]
Length = 536
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 180/355 (50%), Gaps = 36/355 (10%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G + LK ++ V V + L Q L+ V V DR M+++ I
Sbjct: 161 DPGTYIGSGKVSELK-EIVSSTGVDTVICDGE-LSPSQMIALEKALDVKVIDRTMLILDI 218
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HAK++E + Q+++A++ YL TR R A N G +++
Sbjct: 219 FAQHAKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAGGRAGSNGGVGLRGPGETKIEAD 278
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R L KL+K + +K RE+ R+++++ P +A+ GYTN GK++LI A+T L
Sbjct: 279 RRRLRSDMAKLRKEIAGMKTAREVKRSQRKQSTIPQIAIAGYTNAGKSSLINAMTGAGVL 338
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V + LFATLD TT L + +++ DT+GF+ ++PT L+E F+ TLE+ + AD+++H
Sbjct: 339 V-EDALFATLDPTTRRAELADGRAVVFTDTVGFVRHLPTQLVESFRSTLEEVVDADLVLH 397
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELEEKI-LEHVLVVGNKVDAVPPGERVTEEYDL---- 417
VVD S+P L+Q + V+ + + E K+ ++V NK+D P + L
Sbjct: 398 VVDGSDPFPLKQIEAVNTVVSEIVRELKVDAPPEIIVVNKIDQADPLVLAELRHALDDVV 457
Query: 418 LISATRGTGLAQLKEKVQDM---------ILKATGRKNITMRVRSGGS----EYQ 459
+SA G+ +L+ +V+ +L R +I R+ S G+ EY+
Sbjct: 458 FVSAKTAEGIPELEMRVEQFLNTLDTHVRLLVPYTRGDIVSRLHSNGTVLSEEYE 512
>gi|172060766|ref|YP_001808418.1| GTP-binding proten HflX [Burkholderia ambifaria MC40-6]
gi|171993283|gb|ACB64202.1| GTP-binding proten HflX [Burkholderia ambifaria MC40-6]
Length = 396
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 177/339 (52%), Gaps = 28/339 (8%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E +L++S G R + S D K F G G + L+ + DA + + L
Sbjct: 26 EELSLLASSAGARSAVTLTGRRASPDAKMFIGSGKADELR--LACDAHNVEIVIFNHALA 83
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
QQ+ L+ V DR +++ IF A++ E +LQ+ +A+L YL TR I T++
Sbjct: 84 PAQQRNLEQALNRRVVDRTSLILDIFAQRARSHEGKLQVELAQLQYLSTRL--IRAWTHL 141
Query: 233 NITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
KG L++ R ++ ER + LK L++L+ Q R ++ R +V++V
Sbjct: 142 ERQKGGIGLRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSGTMSVSLV 201
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPT 341
GYTN GK+TL ALT + +QLFATLD T+ L + + +I+ DT+GFI +P
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAA-DQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPH 260
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
L+ F+ TLE+ + AD+++HVVD S+ L+Q + V+ L E+ + VLV NK
Sbjct: 261 QLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLH--EIGADTIRQVLVF-NK 317
Query: 402 VDAVPP----GERVT-EEYD----LLISATRGTGLAQLK 431
+DAVP G+ V +EY + +SA G GL L+
Sbjct: 318 IDAVPELAARGDAVERDEYGNISRVFLSARTGQGLDTLR 356
>gi|423090444|ref|ZP_17078743.1| GTP-binding protein HflX [Clostridium difficile 70-100-2010]
gi|357556553|gb|EHJ38148.1| GTP-binding protein HflX [Clostridium difficile 70-100-2010]
Length = 427
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 178/336 (52%), Gaps = 21/336 (6%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G VV S I + S D + GKG +E ++ D+ + + D L Q + ++++
Sbjct: 42 GAEVVGSLIQNKHSVDAAYYIGKGKVEEIR--AYSDSLDATLVIFNDELSGAQIRNIENV 99
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA---TNMNI-TKGF 238
V DR +++ IF A ++E +LQ+ +A+L Y R + T I T+G
Sbjct: 100 VGRKVIDRTTLILDIFAQRALSKEGKLQVELAQLKYRLPRLYGMGGEMSRTGAGIGTRGP 159
Query: 239 LDSKRMV----LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ K + ++ + +++ L ++K RE R K+ + P VA+VGYTN GK+TL+
Sbjct: 160 GEQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSNIPIVALVGYTNAGKSTLLN 219
Query: 295 ALT-------DDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
L + + ++ LFATLDVT + +LPN+ L VDT+GF+S +P L+E F
Sbjct: 220 ELIKTHKDYEQEKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDTVGFVSKLPHDLVEAF 279
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP 407
K TLE+ AD+I+HV+D +N Y QK + L+ L + +K +H+LV NKVD +
Sbjct: 280 KATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVNDK--KHILVY-NKVDKLEL 336
Query: 408 GERVTEEYDLL-ISATRGTGLAQLKEKVQDMILKAT 442
+ D++ ISA +G + +L ++ +++ T
Sbjct: 337 DIYPKSQEDIVYISAKQGINMDKLLNMIEIALMENT 372
>gi|221234757|ref|YP_002517193.1| GTP-binding protein hflX [Caulobacter crescentus NA1000]
gi|220963929|gb|ACL95285.1| GTP-binding protein hflX [Caulobacter crescentus NA1000]
Length = 446
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 171/330 (51%), Gaps = 22/330 (6%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VV++ + L + FGKG +E + AVF D L QQ+ L+ +V
Sbjct: 56 VVEALVAPLRVVTPATLFGKGKVEEFAAICEVEHIDVAVFD--DQLTPIQQRNLEKALKV 113
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
V DR ++++IF A+TRE RLQ+ +A L Y R R + T++ +G
Sbjct: 114 KVVDRTGLILEIFARRARTREGRLQVELARLDY--ERSRLVRTWTHLERQRGGTGSTGGP 171
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
++ R ++ KLKK L +++ R + R+ +++ +PTVA+VGYTN GK+TL
Sbjct: 172 GETQIEIDRRLIAGTILKLKKELEEVRRTRTLHRSARKKVPYPTVALVGYTNAGKSTLFN 231
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT+ + L ++ LFATLD T LP+ + DT+GFIS++P L+E F+ TLE+
Sbjct: 232 RLTEAEVLA-KDMLFATLDPTLRTVKLPDGRPAIMSDTVGFISDLPHELVEAFRATLEEV 290
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEE 414
AD+++HV DV+NPD Q + V+ L L + + V+ V NKVD + +R E
Sbjct: 291 QEADVVLHVRDVANPDSEAQARDVETVLAELGVTLDEGKTVVEVWNKVDLLSEDDREIVE 350
Query: 415 YDL------LISATRGTGLAQLKEKVQDMI 438
+SA G G L ++ +I
Sbjct: 351 GQARRNDASAVSAVTGEGCEALLRRIAGLI 380
>gi|443673328|ref|ZP_21138396.1| putative GTP-binding protein HflX [Rhodococcus sp. AW25M09]
gi|443414143|emb|CCQ16734.1| putative GTP-binding protein HflX [Rhodococcus sp. AW25M09]
Length = 517
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 162/290 (55%), Gaps = 25/290 (8%)
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA- 229
L Q L+ + +V V DR +++ IF HA +RE + Q+A A++ Y+ R R ++
Sbjct: 169 LTPAQLNALEKVVKVKVIDRTALILDIFAQHATSREGKAQVAFAQMEYMLPRLRGWGESM 228
Query: 230 -------TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQK 275
N G +++ R + ER KL++ + +K R+ R ++
Sbjct: 229 SRQAGGRAGSNGGVGLRGPGETKIETDRRRIRERMAKLRREIKGMKQARDTKREQRLSGT 288
Query: 276 FPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGF 335
P++A+VGYTN GK++L+ ALT LV +N LFATLD TT + L + I+ DT+GF
Sbjct: 289 VPSIAIVGYTNAGKSSLLNALTGSGVLV-QNALFATLDPTTRKSTLEDGRAIVLTDTVGF 347
Query: 336 ISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILE 393
+ ++PT L+E F+ TLE+ AD+++HVVD S+P + Q + V E + + E + K+
Sbjct: 348 VRHLPTQLVEAFRSTLEEVTDADLLLHVVDGSDPLPIDQIKAVREVITDVVREQDAKMPP 407
Query: 394 HVLVVGNKVDAVPPGERVTEEYDLL-----ISATRGTGLAQLKEKVQDMI 438
+LVV NK+DA P ++T+ LL +SA G G+ +L++ + +++
Sbjct: 408 ELLVV-NKIDAADP-VQLTQLRGLLDGARFVSAKTGEGIDELRDHLGEIL 455
>gi|38234020|ref|NP_939787.1| GTP-binding protein [Corynebacterium diphtheriae NCTC 13129]
gi|375291107|ref|YP_005125647.1| putative GTP-binding protein [Corynebacterium diphtheriae 241]
gi|376243041|ref|YP_005133893.1| putative GTP-binding protein [Corynebacterium diphtheriae CDCE
8392]
gi|376245939|ref|YP_005136178.1| putative GTP-binding protein [Corynebacterium diphtheriae HC01]
gi|376257338|ref|YP_005145229.1| putative GTP-binding protein [Corynebacterium diphtheriae VA01]
gi|376293444|ref|YP_005165118.1| putative GTP-binding protein [Corynebacterium diphtheriae HC02]
gi|419861005|ref|ZP_14383645.1| putative GTP-binding protein [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
gi|38200282|emb|CAE49967.1| Putative GTP-binding protein [Corynebacterium diphtheriae]
gi|371580778|gb|AEX44445.1| putative GTP-binding protein [Corynebacterium diphtheriae 241]
gi|372106283|gb|AEX72345.1| putative GTP-binding protein [Corynebacterium diphtheriae CDCE
8392]
gi|372108569|gb|AEX74630.1| putative GTP-binding protein [Corynebacterium diphtheriae HC01]
gi|372110767|gb|AEX76827.1| putative GTP-binding protein [Corynebacterium diphtheriae HC02]
gi|372119855|gb|AEX83589.1| putative GTP-binding protein [Corynebacterium diphtheriae VA01]
gi|387982689|gb|EIK56190.1| putative GTP-binding protein [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
Length = 536
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 180/355 (50%), Gaps = 36/355 (10%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G + LK ++ V V + L Q L+ V V DR M+++ I
Sbjct: 161 DPGTYIGSGKVSELK-EIVSSTGVDTVICDGE-LSPSQMIALEKALDVKVIDRTMLILDI 218
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HAK++E + Q+++A++ YL TR R A N G +++
Sbjct: 219 FAQHAKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAGGRAGSNGGVGLRGPGETKIEAD 278
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R L KL+K + +K RE+ R+++++ P +A+ GYTN GK++LI A+T L
Sbjct: 279 RRRLRSDMAKLRKEIAGMKTAREVKRSQRKQSTIPQIAIAGYTNAGKSSLINAMTGAGVL 338
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V + LFATLD TT L + +++ DT+GF+ ++PT L+E F+ TLE+ + AD+++H
Sbjct: 339 V-EDALFATLDPTTRRAELADGRAVVFTDTVGFVRHLPTQLVESFRSTLEEVVDADLVLH 397
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELEEKI-LEHVLVVGNKVDAVPPGERVTEEYDL---- 417
VVD S+P L+Q + V+ + + E K+ ++V NK+D P + L
Sbjct: 398 VVDGSDPFPLKQIEAVNTVVSEIVRELKVDAPPEIIVVNKIDQADPLVLAELRHALDDVV 457
Query: 418 LISATRGTGLAQLKEKVQDM---------ILKATGRKNITMRVRSGGS----EYQ 459
+SA G+ +L+ +V+ +L R +I R+ S G+ EY+
Sbjct: 458 FVSAKTAEGIPELEMRVEQFLNTLDTHVRLLVPYTRGDIVSRLHSNGTVLSEEYE 512
>gi|406943170|gb|EKD75236.1| hypothetical protein ACD_44C00200G0003 [uncultured bacterium]
Length = 415
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 168/314 (53%), Gaps = 30/314 (9%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F G G E +++ ++ + V V+ L Q++ L+ L + V DR +++ I
Sbjct: 51 DPKYFIGSGKAEEVQKAIQ-TTQADLVLVN-HTLTPSQERNLETLLKCRVLDRTGLILDI 108
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLM 247
F A+T E +LQ+ +A+L +L +R I T++ KG L++ R ++
Sbjct: 109 FAQRARTFEGKLQVELAQLQHLASRL--IRGWTHLERQKGGIGLRGPGETQLETDRRLIR 166
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
R + + K L K++ QR R +QR TV++VGYTN GK+TL LT S V NQ
Sbjct: 167 NRIKHIGKQLEKVRIQRAQGRRSRQRSALATVSLVGYTNAGKSTLFNCLTGAGSFVA-NQ 225
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T L ++ DT+GFI NIP TL++ F+ TLE+A+ A +++HV+D S
Sbjct: 226 LFATLDTTLRRIKLTPTEPLILADTVGFIKNIPHTLIQAFRSTLEEAVYATLLLHVIDAS 285
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV---------PPGERVTEEYDLL 418
+P+ +Q V++ L+ ++ L + + NK+D V P +++ E +
Sbjct: 286 SPEREEQINEVEKVLKEIDAHATPL---IRIYNKIDLVQIRPHIIRDPLSQKIKEVW--- 339
Query: 419 ISATRGTGLAQLKE 432
+SA G G+ L+E
Sbjct: 340 LSANTGEGIEFLQE 353
>gi|91977066|ref|YP_569725.1| HSR1-like GTP-binding protein [Rhodopseudomonas palustris BisB5]
gi|91683522|gb|ABE39824.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris
BisB5]
Length = 434
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 214/446 (47%), Gaps = 56/446 (12%)
Query: 88 VFVVQPFIKWGK------KMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKS 141
+ VV P+++ K ++ D L E+ L +I + ++ + + +
Sbjct: 1 MIVVGPYLRVRKTDPDAASVRAIRDSDARLDEAAGLARAID-LEIAEAVLTPISQIRPAT 59
Query: 142 FFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
+ GKG +E + ++G A V +D L QQ+ L+ + V DR ++++IF
Sbjct: 60 YLGKGKVEEILGIIKGH---EADLVVMDCALSPIQQRNLEKAWGAKVLDRTGLILEIFGR 116
Query: 201 HAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMER 249
AKT+E LQ+ +A L Y R R + T++ +G +++ R ++ +R
Sbjct: 117 RAKTKEGSLQVELAHLNY--QRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLIGDR 174
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
+L+ L K++ R + R +QR + VA+VGYTN GK+TL LT D + + LF
Sbjct: 175 ITRLENELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRAD-VQAADMLF 233
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T LP+ + + DT+GFISN+PT L+ F+ TLE+ + AD+I+HV D+++
Sbjct: 234 ATLDPTLRALSLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEADLILHVRDIAHE 293
Query: 370 DYLQQKQHVDETLQHLELEE---KILEHVLVVGNKVDAVPP----------GERVTEEYD 416
D Q + VD L+ L +E +ILE + NK+D P R +
Sbjct: 294 DAEAQDRDVDAVLRQLGVEADSGRILE----IWNKIDRFEPEQLEELRNIAARRSPDHPC 349
Query: 417 LLISATRGTGLAQLKEKVQDMILKATGRKNITMRV------RSGGSEYQWLMKHTAV-SN 469
L+SA G G V D++L R +T V + G+ WL ++ V S
Sbjct: 350 FLVSAVSGEG-------VDDVLLAIEQRLAMTRTVLDLTIDAADGAGVSWLHRNAEVLSK 402
Query: 470 IREDDTSAEHLLLDVVMTDVIMNKFK 495
+D + +D D+++ +FK
Sbjct: 403 ELQDGRYTMTVRVDETKRDIVVERFK 428
>gi|375293311|ref|YP_005127850.1| putative GTP-binding protein [Corynebacterium diphtheriae INCA 402]
gi|371582982|gb|AEX46648.1| putative GTP-binding protein [Corynebacterium diphtheriae INCA 402]
Length = 592
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 180/355 (50%), Gaps = 36/355 (10%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G + LK ++ V V + L Q L+ V V DR M+++ I
Sbjct: 217 DPGTYIGSGKVSELK-EIVSSTGVDTVICDGE-LSPSQMIALEKALDVKVIDRTMLILDI 274
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HAK++E + Q+++A++ YL TR R A N G +++
Sbjct: 275 FAQHAKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAGGRAGSNGGVGLRGPGETKIEAD 334
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R L KL+K + +K RE+ R+++++ P +A+ GYTN GK++LI A+T L
Sbjct: 335 RRRLRSDMAKLRKEIAGMKTAREVKRSQRKQSTIPQIAIAGYTNAGKSSLINAMTGAGVL 394
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V + LFATLD TT L + +++ DT+GF+ ++PT L+E F+ TLE+ + AD+++H
Sbjct: 395 V-EDALFATLDPTTRRAELADGRAVVFTDTVGFVRHLPTQLVESFRSTLEEVVDADLVLH 453
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELEEKI-LEHVLVVGNKVDAVPPGERVTEEYDL---- 417
VVD S+P L+Q + V+ + + E K+ ++V NK+D P + L
Sbjct: 454 VVDGSDPFPLKQIEAVNTVVSEIVRELKVDAPPEIIVVNKIDQADPLVLAELRHALDDVV 513
Query: 418 LISATRGTGLAQLKEKVQDM---------ILKATGRKNITMRVRSGGS----EYQ 459
+SA G+ +L+ +V+ +L R +I R+ S G+ EY+
Sbjct: 514 FVSAKTAEGIPELEMRVEQFLNTLDTHVRLLVPYTRGDIVSRLHSNGTVLSEEYE 568
>gi|346992860|ref|ZP_08860932.1| GTP-binding protein HflX [Ruegeria sp. TW15]
Length = 423
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 195/387 (50%), Gaps = 29/387 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VV S ++ L FG G +E L + + V V + V + QQ+ L+ ++V
Sbjct: 45 VVGSEVVRLQRAQAGLLFGSGKIEELGERFH-ENEVELVLIDGPVTPV-QQRNLEKAWKV 102
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
+ DR ++++IF A+TRE LQ+ +A L Y R R + T++ +G
Sbjct: 103 KILDRTGLILEIFSDRARTREGVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGP 160
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+++ R + E+ +L++ L K+ R + R + + +P VA+VGYTN GK+TL
Sbjct: 161 GETQIEADRRAIDEQLVRLRRQLQKVVKTRTLHRAARAKVPYPIVALVGYTNAGKSTLFN 220
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT ++ R+ LFATLD T LP+ ++ DT+GFISN+PT L+ F+ TLE+
Sbjct: 221 GLTGA-KVMARDMLFATLDPTMRRVELPDGPEVILSDTVGFISNLPTELVAAFRATLEEV 279
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER---- 410
+ AD+++H+ D+S+ + Q Q V+ L L +E+ L V NK+D + +R
Sbjct: 280 LGADLVVHLRDISHEETEAQAQDVETILTSLGVEDD--RPRLEVWNKIDLLSSEDRQATL 337
Query: 411 VTEEYD---LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
E D ISA G G+A L ++ ++ A +++ + G + WL + V
Sbjct: 338 ARAERDPAIFAISAVTGEGIAPLLSEIATILQGARHESTLSLTF-AEGQKRAWLFRQEVV 396
Query: 468 SNIREDDTSAEHLLLDVVMTDVIMNKF 494
R ++ + + + V+ TD +F
Sbjct: 397 ---RSEEQTEDGFEITVLWTDKQAARF 420
>gi|334341343|ref|YP_004546323.1| GTP-binding proten HflX [Desulfotomaculum ruminis DSM 2154]
gi|334092697|gb|AEG61037.1| GTP-binding proten HflX [Desulfotomaculum ruminis DSM 2154]
Length = 417
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 168/312 (53%), Gaps = 18/312 (5%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVD-VLKLHQQKMLQDLFQVPVFDRYMIVIQ 196
D +F G+G +E L + V A + D L Q + L++ V DR +++
Sbjct: 57 DTATFIGRGKVEELADYCQ---EVGANLIIFDRELSPAQARNLEERIGHKVIDRTQLILD 113
Query: 197 IFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLME 248
IF A+T+E +LQ+ +A+L YL R R + L++ R + +
Sbjct: 114 IFARRAQTKEGKLQVELAQLKYLLPRLTGQGNQLSRLGGGIGTRGPGETKLETDRRRIRK 173
Query: 249 REQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQL 308
R L++ L +++ R ++R ++ + P V++VGYTN GK+TL++ LT + LV ++L
Sbjct: 174 RISDLEQELKEVQRHRALLRQDRKVEPLPLVSLVGYTNAGKSTLLRTLTGAEVLV-EDKL 232
Query: 309 FATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSN 368
FATLD TT +LPN IL DT+GFI N+P L+ F+ TLE+ AD+++HVVDVS+
Sbjct: 233 FATLDPTTRRVVLPNNDIILLTDTVGFIQNLPHHLVAAFRATLEEVQEADLLLHVVDVSH 292
Query: 369 PDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER--VTEEYDLLISATRGTG 426
P +Q + VD L+ L+ K V++V NK+D V +T + ISA G
Sbjct: 293 PYCEEQIRAVDGVLESLKASHK---PVIMVYNKMDLVKDSRSLPITGHPAVAISALSGQD 349
Query: 427 LAQLKEKVQDMI 438
+ QL K+ +++
Sbjct: 350 IQQLLAKITEVL 361
>gi|319898998|ref|YP_004159091.1| GTP-binding protein HflX [Bartonella clarridgeiae 73]
gi|319402962|emb|CBI76513.1| GTP-binding protein HflX [Bartonella clarridgeiae 73]
Length = 444
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 193/371 (52%), Gaps = 28/371 (7%)
Query: 82 LGTDHQVFVVQPFIKWGKKMKRNT---TRDFMLAESKALVSSIQGWRVVDSTIISLLSFD 138
+G +V + P + K ++ + + D + E+ L +I+ V+ I+++ +
Sbjct: 15 IGERMRVVIFLPIYSYKYKRQKTSHERSVDSRVKEALGLACAIK-LNVIHYEIVNITTPC 73
Query: 139 KKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIF 198
+ F G + + + +T V L QQ+ L+ L+ V DR ++++IF
Sbjct: 74 SSTLFRIGKVNKFAHYI-SEHHITLAIVD-HFLTPVQQRNLEKLWNCKVIDRTALILEIF 131
Query: 199 KAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLM 247
A+T+E LQ+ +A L Y + R + T++ +G +++ R +L
Sbjct: 132 GDRARTKEGVLQVELAHLSY--QKSRLVRSWTHLERQRGGSGFLGGPGETQIEADRRLLQ 189
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
+ ++++ L + R + R K+++ +P +A+VGYTN GK+TL L+D + L +
Sbjct: 190 NKIIRIRRELETVVKTRALHRAKRKKIPYPVIALVGYTNAGKSTLFNHLSDSNVLA-EDM 248
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T + +LP+ ++L DT+GFISN+PT L+ F+ TLE+ + AD+I+HV DVS
Sbjct: 249 LFATLDPTLRKIVLPHGQKVLLSDTVGFISNLPTHLIAAFRATLEEVIEADLILHVRDVS 308
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV---PPGERVTEEYDLL-----I 419
+PD+ Q V + L L ++ ++H++ + NK+D + G T LL +
Sbjct: 309 DPDHYAHAQDVLKILSSLGVDINDMDHIVEIWNKIDVLDQHALGILQTNSKKLLNPALMM 368
Query: 420 SATRGTGLAQL 430
SA G GL QL
Sbjct: 369 SALTGKGLKQL 379
>gi|16125990|ref|NP_420554.1| GTP-binding protein HflX [Caulobacter crescentus CB15]
gi|13423166|gb|AAK23722.1| GTP-binding protein HflX [Caulobacter crescentus CB15]
Length = 427
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 171/330 (51%), Gaps = 22/330 (6%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VV++ + L + FGKG +E + AVF D L QQ+ L+ +V
Sbjct: 37 VVEALVAPLRVVTPATLFGKGKVEEFAAICEVEHIDVAVFD--DQLTPIQQRNLEKALKV 94
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
V DR ++++IF A+TRE RLQ+ +A L Y R R + T++ +G
Sbjct: 95 KVVDRTGLILEIFARRARTREGRLQVELARLDY--ERSRLVRTWTHLERQRGGTGSTGGP 152
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
++ R ++ KLKK L +++ R + R+ +++ +PTVA+VGYTN GK+TL
Sbjct: 153 GETQIEIDRRLIAGTILKLKKELEEVRRTRTLHRSARKKVPYPTVALVGYTNAGKSTLFN 212
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT+ + L ++ LFATLD T LP+ + DT+GFIS++P L+E F+ TLE+
Sbjct: 213 RLTEAEVLA-KDMLFATLDPTLRTVKLPDGRPAIMSDTVGFISDLPHELVEAFRATLEEV 271
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEE 414
AD+++HV DV+NPD Q + V+ L L + + V+ V NKVD + +R E
Sbjct: 272 QEADVVLHVRDVANPDSEAQARDVETVLAELGVTLDEGKTVVEVWNKVDLLSEDDREIVE 331
Query: 415 YDL------LISATRGTGLAQLKEKVQDMI 438
+SA G G L ++ +I
Sbjct: 332 GQARRNDASAVSAVTGEGCEALLRRIAGLI 361
>gi|415728128|ref|ZP_11471701.1| GTP-binding protein [Gardnerella vaginalis 6119V5]
gi|388065266|gb|EIK87757.1| GTP-binding protein [Gardnerella vaginalis 6119V5]
Length = 486
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 169/343 (49%), Gaps = 26/343 (7%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLH 174
A ++ G V D + D ++ G G E+ + DA V D L
Sbjct: 92 AALAQTAGAVVCDGILQQRYRPDAATYVGSGKAREIAAVVAQHDADTIIVD---DDLPPS 148
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--- 231
Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+L Y+ R R A +
Sbjct: 149 QRRALEDTTKVKVVDRTAVILDIFAQHATSREGKAQVELAQLQYMLPRLRGWGAALSRQA 208
Query: 232 --------MNITKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++G ++K R + R KL+ + + R++ R ++R+ PTV
Sbjct: 209 GGRAAGEAGIGSRGPGETKIEMDRRAIRNRISKLRHDIAHMAPARDVKRESRRRKDIPTV 268
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
AVVGYTN GK+++I LT LV N LFATLD + VDT+GF+ +
Sbjct: 269 AVVGYTNAGKSSIINCLTGSQELV-ENALFATLDTAVRRAQTQDGRNYTLVDTVGFVRRL 327
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+E FK TLE+ AD+I+HVVD S+PD + Q V+E L ++ E I + ++
Sbjct: 328 PTQLVEAFKSTLEEVSQADVILHVVDGSHPDPISQIDAVNEVLSKIDGVEDIPQ--IIAF 385
Query: 400 NKVDAVPPGER----VTEEYDLLISATRGTGLAQLKEKVQDMI 438
NK D + R +++SA G + L++ +++++
Sbjct: 386 NKSDMMSDATREHLNAIYSNAIIVSAASGENVKILRDSIEELL 428
>gi|312139394|ref|YP_004006730.1| gtpase [Rhodococcus equi 103S]
gi|325672725|ref|ZP_08152421.1| GTP-binding protein [Rhodococcus equi ATCC 33707]
gi|311888733|emb|CBH48045.1| GTPase [Rhodococcus equi 103S]
gi|325556602|gb|EGD26268.1| GTP-binding protein [Rhodococcus equi ATCC 33707]
Length = 492
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 178/348 (51%), Gaps = 34/348 (9%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G + L++ V T + L Q L+ + +V V DR +++ I
Sbjct: 116 DAATYIGSGKADELRQVVLATGADTVICDGE--LTPAQLTALEKVVKVKVIDRTALILDI 173
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HA +RE + Q+A+A++ Y+ R R ++ N G +++
Sbjct: 174 FAQHATSREGKAQVALAQMEYMLPRLRGWGESMSRQAGGRAGSNGGVGLRGPGETKIETD 233
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R + ER KL++ + +K R+ R+ + R + P+VA+VGYTN GK++L+ ALT L
Sbjct: 234 RRRIRERMAKLRREIKGMKAARDTKRSHRLRSEIPSVAIVGYTNAGKSSLLNALTGSGVL 293
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V +N LFATLD TT + + + DT+GF+ ++PT L+E F+ TLE+ AD+++H
Sbjct: 294 V-QNALFATLDPTTRQASFEDGREYVLTDTVGFVRHLPTQLVEAFRSTLEEVTDADLLLH 352
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELE-EKILEHVLVVGNKVDAVPPGERVTEEYDLL--- 418
VVD S+P Q + V E + + E + L+V NK+DA P +T+ LL
Sbjct: 353 VVDGSDPLPTDQIKAVREVVTEVIRENDTTAPPELIVVNKIDAADP-VVLTQLRGLLPGA 411
Query: 419 --ISATRGTGLAQLKEKVQDM---------ILKATGRKNITMRVRSGG 455
+SA G G+ +L+ ++ ++ +L R ++ R+ S G
Sbjct: 412 VFVSARTGEGIDELRTRLGEIVRRPEVEVDVLVPYSRGDLVARIHSDG 459
>gi|379795672|ref|YP_005325670.1| GTP-binding protein [Staphylococcus aureus subsp. aureus MSHR1132]
gi|356872662|emb|CCE59001.1| GTP-binding protein, putative [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 413
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 153/280 (54%), Gaps = 18/280 (6%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D+K + GKG +E + Q + + V ++ D L Q K L + V + DR ++++I
Sbjct: 61 DRKYYVGKGKIEEI--QAFIEFKDIDVVITNDELTTAQSKSLNEALGVKIIDRTQLILEI 118
Query: 198 FKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMER 249
F A+++E +LQ+ +A+L YL R R + L+ R + R
Sbjct: 119 FALRARSKEGKLQVELAQLDYLLPRLQGHGKSLSRLGGGIGTRGPGETKLEMDRRHIRTR 178
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
++K L ++G RE RNK+ + + VA+VGYTN GK++ L ++++ ++QLF
Sbjct: 179 MNEIKHQLQTVEGHRERYRNKRNQNQVFQVALVGYTNAGKSSWFNVLANEETY-EKDQLF 237
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T + + N ++ DT+GFI +PTTL+ FK TLE+A AD+++HVVD S+P
Sbjct: 238 ATLDPKTRQIQINNGFNLIISDTVGFIQKLPTTLIAAFKSTLEEAKGADLLVHVVDSSHP 297
Query: 370 DYLQQKQHVDETLQHLELEEKILEHV--LVVGNKVDAVPP 407
+Y Q V++ ++ L+ + H+ +V+ NK D P
Sbjct: 298 EYRTQYDTVNDLIKQLD-----MNHIPQIVIFNKSDLCEP 332
>gi|427718309|ref|YP_007066303.1| GTP-binding proten HflX [Calothrix sp. PCC 7507]
gi|427350745|gb|AFY33469.1| GTP-binding proten HflX [Calothrix sp. PCC 7507]
Length = 583
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 159/286 (55%), Gaps = 23/286 (8%)
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY------- 223
L Q + L+ V V DR +++ IF A++R +LQ+ +A+L Y+ R
Sbjct: 294 LSPSQVRNLEAQIGVRVVDRTEVILDIFAQRAQSRAGKLQVELAQLEYMQPRLTGRGRTM 353
Query: 224 -RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
R + L+++R + +R +L+K +N+L+ R +R ++Q Q+ P+VA+V
Sbjct: 354 SRLGGGIGTRGPGETKLETERRAIQQRISRLQKEVNQLQAHRSRLRQRRQHQEVPSVALV 413
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL-----RILYVDTIGFIS 337
GYTN GK+TL+ ALT+ + + +QLFATLD TT ++PN IL DT+GFI
Sbjct: 414 GYTNAGKSTLLNALTNAE-VYTADQLFATLDPTTRRLVIPNSSTSEPQEILITDTVGFIH 472
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
+P +L++ F+ TLE+ AD ++H+VD+S+P +L + V E L + + LV
Sbjct: 473 ELPPSLMDAFRATLEEVTEADGLLHLVDLSHPAWLSHIRSVREILAQMPITPG---PALV 529
Query: 398 VGNKVDAVPPGERVT---EEYDL--LISATRGTGLAQLKEKVQDMI 438
NK+D V E + EE+ L ISA++ GL L++++ +I
Sbjct: 530 AFNKIDQV-SSETLALAREEFPLAVFISASQRLGLETLRQRLAQLI 574
>gi|163846033|ref|YP_001634077.1| GTP-binding proten HflX [Chloroflexus aurantiacus J-10-fl]
gi|222523761|ref|YP_002568231.1| GTP-binding proten HflX [Chloroflexus sp. Y-400-fl]
gi|163667322|gb|ABY33688.1| GTP-binding proten HflX [Chloroflexus aurantiacus J-10-fl]
gi|222447640|gb|ACM51906.1| GTP-binding proten HflX [Chloroflexus sp. Y-400-fl]
Length = 445
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 176/352 (50%), Gaps = 38/352 (10%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLE---LLKRQVRGDARVTAVFVSVDVLK 172
AL++ VV L K F G G ++ L+ Q + D + V D L
Sbjct: 43 ALLAQTAELEVVGRIFQRLPEPQPKFFIGPGKVKEVAALREQTQAD-----LIVFDDELS 97
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYR-------- 224
Q + L++ Q V DR +++ IF HA+T E RLQ+ +A+ YL R R
Sbjct: 98 PAQTRNLEEELQTQVIDRTGLILDIFARHARTHEGRLQVELAQYQYLLPRLRRQWTHLER 157
Query: 225 ----TIEDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
A + +G L+ R ++ R LK L + RE+ R ++++
Sbjct: 158 QAGTGGTAAGGVVGLRGPGETQLEIDRRLIERRIAWLKDQLADVHRHRELYRQRRRQTGI 217
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P +A+VGYTN GK+TL+ A+T D L ++LFATLD TT + +LP + L DT+GFI
Sbjct: 218 PVIALVGYTNAGKSTLLNAMTGADVLA-EDKLFATLDPTTRQVLLPGNIVALMTDTVGFI 276
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
+P L+ F+ TLE+ AD+++HVVDV++ + + Q V++TL+ L ++ K VL
Sbjct: 277 QKLPPQLVAAFRATLEEIEEADLLLHVVDVTHRNAQEHAQTVEQTLRELGVDHK---PVL 333
Query: 397 VVGNKVDAVPPGE-----RVTEEYDL-----LISATRGTGLAQLKEKVQDMI 438
V NK+D + ++ E L +SA RG GL L E++ M+
Sbjct: 334 TVLNKIDLLEGATAEDVGQIAAEMGLPTDIVAVSAQRGWGLQTLGERIVAML 385
>gi|261379719|ref|ZP_05984292.1| GTP-binding protein HflX [Neisseria subflava NJ9703]
gi|284797392|gb|EFC52739.1| GTP-binding protein HflX [Neisseria subflava NJ9703]
Length = 386
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 150/277 (54%), Gaps = 14/277 (5%)
Query: 142 FFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAH 201
F G G +E L V+ VF L Q++ L+ Q V DR +++ IF
Sbjct: 75 FVGTGKVEELAAAVKQHDVGLVVFNHE--LTPTQERNLEKELQCRVLDRVGLILAIFAKR 132
Query: 202 AKTREARLQIAIAELPYLWTR----YRTIEDATNMNITKGF----LDSKRMVLMEREQKL 253
A+++E +LQ+ +A+L +L R Y ++ KG L++ R ++ ++ L
Sbjct: 133 AQSQEGKLQVELAQLNHLSGRLVRGYGHLQSQKGGIGLKGPGETQLETDRRLIGQKITAL 192
Query: 254 KKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLD 313
KK L ++ QR R + + T A+VGYTN GK++L LT D L ++QLFATLD
Sbjct: 193 KKQLADVRKQRATRRKSRMSGRLKTFAIVGYTNAGKSSLFNRLTKADVLA-KDQLFATLD 251
Query: 314 VTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQ 373
T L + ++ DT+GF+ ++P L+ F TLE+ +AD+++HVVD SNPD+ +
Sbjct: 252 TTARRLFLSHEASVILTDTVGFVRDLPHKLVSAFSATLEETAMADVLLHVVDASNPDFER 311
Query: 374 QKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER 410
Q V+E L+ + E I + LVV NK+D +PPG R
Sbjct: 312 QMDDVNEVLEEIGAHE-IPQ--LVVYNKIDLLPPGMR 345
>gi|405969479|gb|EKC34448.1| Putative GTP-binding protein 6 [Crassostrea gigas]
Length = 220
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 95/120 (79%), Gaps = 1/120 (0%)
Query: 238 FLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALT 297
++ + ++ ERE++L+ L K++ QRE++R + Q++PTVAVVGYTNCGKTTLIKALT
Sbjct: 86 YIQKRHALVAERERRLRGELEKVRQQREVLRQNRINQQYPTVAVVGYTNCGKTTLIKALT 145
Query: 298 DDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLA 357
+D+SL P N+LFATLDVT H+ L N +++L +DT+GFIS+IP TL+E F TLEDA++A
Sbjct: 146 EDESLTPENRLFATLDVTVHQAFLKN-MKVLLIDTVGFISDIPKTLMEAFSATLEDALIA 204
>gi|376254528|ref|YP_005142987.1| putative GTP-binding protein [Corynebacterium diphtheriae PW8]
gi|376287954|ref|YP_005160520.1| putative GTP-binding protein [Corynebacterium diphtheriae BH8]
gi|371585288|gb|AEX48953.1| putative GTP-binding protein [Corynebacterium diphtheriae BH8]
gi|372117612|gb|AEX70082.1| putative GTP-binding protein [Corynebacterium diphtheriae PW8]
Length = 536
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 180/355 (50%), Gaps = 36/355 (10%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G + LK ++ V V + L Q L+ V V DR M+++ I
Sbjct: 161 DPGTYIGSGKVSELK-EIVSSTGVDTVICDGE-LSPSQMIALEKALDVKVIDRTMLILDI 218
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HAK++E + Q+++A++ YL TR R A N G +++
Sbjct: 219 FAQHAKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAGGRAGSNGGVGLRGPGETKIEAD 278
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R L KL+K + +K RE+ R+++++ P +A+ GYTN GK++LI A+T L
Sbjct: 279 RRRLRSDMAKLRKEIAGMKTAREVKRSQRKQSTIPQIAIAGYTNAGKSSLINAMTGAGVL 338
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V + LFATLD TT L + +++ DT+GF+ ++PT L+E F+ TLE+ + AD+++H
Sbjct: 339 V-EDALFATLDPTTRRAELADGRAVVFTDTVGFVRHLPTQLVESFRSTLEEVVDADLVLH 397
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELEEKI-LEHVLVVGNKVDAVPPGERVTEEYDL---- 417
VVD S+P L+Q + V+ + + E K+ ++V NK+D P + L
Sbjct: 398 VVDGSDPFPLKQIEAVNTVVSEIVRELKVDAPPEIIVINKIDQADPLVLAELRHALDDVV 457
Query: 418 LISATRGTGLAQLKEKVQDM---------ILKATGRKNITMRVRSGGS----EYQ 459
+SA G+ +L+ +V+ +L R +I R+ S G+ EY+
Sbjct: 458 FVSAKTAEGIPELEMRVEQFLNTLDTHVRLLVPYTRGDIVSRLHSNGTVLSEEYE 512
>gi|376290642|ref|YP_005162889.1| putative GTP-binding protein [Corynebacterium diphtheriae C7
(beta)]
gi|372104038|gb|AEX67635.1| putative GTP-binding protein [Corynebacterium diphtheriae C7
(beta)]
Length = 536
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 180/355 (50%), Gaps = 36/355 (10%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G + LK ++ V V + L Q L+ V V DR M+++ I
Sbjct: 161 DPGTYIGSGKVSELK-EIVSSTGVDTVICDGE-LSPSQMIALEKALDVKVIDRTMLILDI 218
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HAK++E + Q+++A++ YL TR R A N G +++
Sbjct: 219 FAQHAKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAGGRAGSNGGVGLRGPGETKIEAD 278
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R L KL+K + +K RE+ R+++++ P +A+ GYTN GK++LI A+T L
Sbjct: 279 RRRLRSDMAKLRKEIAGMKTAREVKRSQRKQSTIPQIAIAGYTNAGKSSLINAMTGAGVL 338
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V + LFATLD TT L + +++ DT+GF+ ++PT L+E F+ TLE+ + AD+++H
Sbjct: 339 V-EDALFATLDPTTRRAELADGRAVVFTDTVGFVRHLPTQLVESFRSTLEEVVDADLVLH 397
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELEEKI-LEHVLVVGNKVDAVPPGERVTEEYDL---- 417
VVD S+P L+Q + V+ + + E K+ ++V NK+D P + L
Sbjct: 398 VVDGSDPFPLKQIEAVNTVVSEIVRELKVDAPPEIIVINKIDQADPLVLAELRHALDDVV 457
Query: 418 LISATRGTGLAQLKEKVQDM---------ILKATGRKNITMRVRSGGS----EYQ 459
+SA G+ +L+ +V+ +L R +I R+ S G+ EY+
Sbjct: 458 FVSAKTAEGIPELEMRVEQFLNTLDTHVRLLVPYTRGDIVSRLHSNGTVLSEEYE 512
>gi|253580120|ref|ZP_04857387.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848639|gb|EES76602.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 411
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 174/334 (52%), Gaps = 22/334 (6%)
Query: 118 VSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRG-DARVTAVFVSVDVLKLHQQ 176
++S G V I + S ++ GKG +E ++ V DA T + D L Q
Sbjct: 34 LASTAGAVTVGRIIQNRESVHPGTYIGKGKIEEVRALVYAMDA--TGIICD-DELSPAQL 90
Query: 177 KMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN----- 231
L+ V DR ++++ IF A A T E ++Q+ +A+L Y R + ++ +
Sbjct: 91 NNLERELDCKVMDRTLLILDIFAARAITSEGKIQVELAQLRYRSARLVGLRESLSRLGGG 150
Query: 232 ---MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCG 288
+ L++ R ++ R LK+ L++++ RE++R+ + R T A+VGYTN G
Sbjct: 151 IGTRGPGEKKLETDRRLIRTRISALKQELSQVEKHRELIRSSRARGNMKTAAIVGYTNAG 210
Query: 289 KTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFK 348
K+TL+ LT + L ++LFATLD TT L + +IL DT+GFI +P L+E FK
Sbjct: 211 KSTLLNTLTGSEVL-SEDKLFATLDPTTRLLNLKDGQQILLTDTVGFIHKLPHHLVEAFK 269
Query: 349 VTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG 408
TLE+A AD IIHVVD SN Q V ETL+ L + K ++ + NK DA PG
Sbjct: 270 STLEEAKYADYIIHVVDSSNQQAEMQMHVVYETLKELGVMGK---KIITLFNKQDA--PG 324
Query: 409 ERV----TEEYDLLISATRGTGLAQLKEKVQDMI 438
V +Y L +SA G GLA L + ++ ++
Sbjct: 325 ACVLRDFKSDYTLKVSAKTGEGLADLNDLLEKLL 358
>gi|381397045|ref|ZP_09922459.1| GTP-binding proten HflX [Microbacterium laevaniformans OR221]
gi|380776004|gb|EIC09294.1| GTP-binding proten HflX [Microbacterium laevaniformans OR221]
Length = 507
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 180/374 (48%), Gaps = 38/374 (10%)
Query: 88 VFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGN 147
V +V + + ++ N+ R+ A ++ G V+D + D ++ G+G
Sbjct: 92 VVLVGVYPQGSQEDAENSLREL------AALAETAGAVVLDGVLQRRPHPDPATYIGRGK 145
Query: 148 LELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
L+ V A V A V D L Q++ L+D+ +V V DR +++ IF HAK+RE
Sbjct: 146 AAELRDLV---AAVGADTVIADTELAPSQRRALEDVVKVKVIDRTTVILDIFSQHAKSRE 202
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNI------------------TKGFLDSKRMVLME 248
+ Q+ +A+L YL R R ++ + TK LD +R +
Sbjct: 203 GKAQVELAQLEYLLPRLRGWGESMSRQAGGQVGAGGAGMGSRGPGETKIELDRRR--IRT 260
Query: 249 REQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQL 308
+ +L++ L RE R++++R P+VA+ GYTN GK++L+ LT LV N L
Sbjct: 261 KMAQLRRQLRDFAPAREAKRSERKRNTIPSVAIAGYTNAGKSSLLNRLTSAGVLV-ENAL 319
Query: 309 FATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSN 368
FATLD T + DT+GF+ N+P L+E F+ TLE+ AD+++HVVD S+
Sbjct: 320 FATLDATVRRAQAADGRVYTLTDTVGFVRNLPHQLVEAFRSTLEEVGDADVLVHVVDGSH 379
Query: 369 PDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT----EEYDLLISATRG 424
PD Q V + + + +VV NK D V R+ E L +S+ G
Sbjct: 380 PDPAAQLATVRDVMGDVGARST---REIVVFNKADLVDDDARLVLRGLEPSALFVSSRTG 436
Query: 425 TGLAQLKEKVQDMI 438
G+ QL+ ++D +
Sbjct: 437 EGIDQLRTVIEDAL 450
>gi|255263172|ref|ZP_05342514.1| GTP-binding protein HflX [Thalassiobium sp. R2A62]
gi|255105507|gb|EET48181.1| GTP-binding protein HflX [Thalassiobium sp. R2A62]
Length = 452
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 205/412 (49%), Gaps = 33/412 (8%)
Query: 85 DHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFG 144
D +V++P IK + T LAE+ +L ++ V ++ L FG
Sbjct: 12 DTWAWVIRPDIKSDHDRRDPATS---LAEAVSLARALPNLVVQGDEVVRLPKAHPGMLFG 68
Query: 145 KGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKT 204
G + +K ++ DA V V + V + QQ+ L+ + V + DR ++++IF A+T
Sbjct: 69 SGKIAEVKERLH-DAEVDLVLIDGPVTPV-QQRNLEKEWGVKLLDRTGLILEIFSDRART 126
Query: 205 REARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKL 253
RE LQ+ +A L Y R R + T++ +G +++ R + ++ +L
Sbjct: 127 REGVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDDQLVRL 184
Query: 254 KKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLD 313
+K L K++ R + R+ + + FP VA+VGYTN GK+TL LT + ++ LFATLD
Sbjct: 185 RKQLGKVEKTRALHRSARAKVPFPIVALVGYTNAGKSTLFNRLTGAEVFA-KDMLFATLD 243
Query: 314 VTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQ 373
T + LP I+ DT+GFIS++PT L+ F+ TLE+ + AD+I+HV D+S+ D +
Sbjct: 244 PTMRKVDLPTGDEIILSDTVGFISDLPTELVASFRATLEEVLDADLILHVRDISSADTHE 303
Query: 374 QKQHVDETLQHLELEEKILEHVLVVGNKVDAVP----PGERVTEEYD---LLISATRGTG 426
Q + V E L L + + +L V NK+D V G + D + S+ G G
Sbjct: 304 QSRDVMEILTKLGVGQDA--PLLEVWNKIDQVELDVRKGLNTASDRDDAIFVTSSVTGEG 361
Query: 427 LAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAE 478
+ L + D++ A + +T+ + G WL + + ED+T E
Sbjct: 362 MDPLLAAISDILNAAMKIETLTLGF-ADGRARAWLHN----TGVVEDETQTE 408
>gi|300312251|ref|YP_003776343.1| GTP-binding protein [Herbaspirillum seropedicae SmR1]
gi|300075036|gb|ADJ64435.1| GTP-binding protein [Herbaspirillum seropedicae SmR1]
Length = 374
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 161/292 (55%), Gaps = 32/292 (10%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
QQ+ L+ L +V V DR +++ IF AK+ E ++Q+ +A+L +L TR I T++
Sbjct: 80 QQRNLERLLKVRVLDRTSLILDIFAQRAKSHEGKVQVELAQLQHLSTRL--IRGWTHLER 137
Query: 235 TKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGY 284
KG L++ R +L ER + L+ L KL+ Q R + R + +V++VGY
Sbjct: 138 QKGGIGLRGPGETQLETDRRLLGERVKALRAVLAKLRRQHATQRRARGRNETFSVSLVGY 197
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
TN GK+T+ AL + NQLFATLD T+ L ++ DT+GFI +P L+
Sbjct: 198 TNAGKSTIFNALAKA-GVYAANQLFATLDTTSRRVYLGEVGHVVISDTVGFIRELPHQLV 256
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV--LVVGNKV 402
E F+ TLE+ + AD+++HVVD ++P ++Q + V+ L L+E +HV ++V NK+
Sbjct: 257 EAFRATLEETIHADLLLHVVDAASPVRMEQIEEVN-----LVLKEIGADHVPQILVWNKI 311
Query: 403 DAVPPGERVTEEYD-------LLISATRGTGLAQLKEKVQDMI---LKATGR 444
DA G T EYD + +SA G GL L+E + + L+A GR
Sbjct: 312 DAA--GLEPTVEYDEYGKIQRVFVSAKSGAGLDLLREAIAASLKAALEARGR 361
>gi|170702833|ref|ZP_02893682.1| GTP-binding proten HflX [Burkholderia ambifaria IOP40-10]
gi|170132251|gb|EDT00730.1| GTP-binding proten HflX [Burkholderia ambifaria IOP40-10]
Length = 396
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 177/339 (52%), Gaps = 28/339 (8%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E +L++S G R + S D K F G G + L+ + DA + + L
Sbjct: 26 EELSLLASSAGARPAVTLTGRRASPDAKMFIGSGKADELR--LACDAHNVEIVIFNHALA 83
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
QQ+ L+ V DR +++ IF A++ E +LQ+ +A+L YL TR I T++
Sbjct: 84 PAQQRNLEQALNRRVVDRTSLILDIFAQRARSHEGKLQVELAQLQYLSTRL--IRAWTHL 141
Query: 233 NITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
KG L++ R ++ ER + LK L++L+ Q R ++ R +V++V
Sbjct: 142 ERQKGGIGLRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSGTMSVSLV 201
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPT 341
GYTN GK+TL ALT + +QLFATLD T+ L + + +I+ DT+GFI +P
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAA-DQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPH 260
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
L+ F+ TLE+ + AD+++HVVD S+ L+Q + V+ L E+ + VLV NK
Sbjct: 261 QLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLH--EIGADTIRQVLVF-NK 317
Query: 402 VDAVPP----GERVT-EEYD----LLISATRGTGLAQLK 431
+DAVP G+ V +EY + +SA G GL L+
Sbjct: 318 IDAVPELAARGDAVERDEYGNISRVFLSARTGQGLDTLR 356
>gi|338707838|ref|YP_004662039.1| GTP-binding proten HflX [Zymomonas mobilis subsp. pomaceae ATCC
29192]
gi|336294642|gb|AEI37749.1| GTP-binding proten HflX [Zymomonas mobilis subsp. pomaceae ATCC
29192]
Length = 458
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 208/434 (47%), Gaps = 34/434 (7%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
++ VV P ++ +R+T + L E+ L +I G VV L S + FG+G
Sbjct: 17 RILVVLPELE--DNNRRST--EARLEEATGLAHAI-GLDVVAKLAFRLRSPKAATLFGQG 71
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
++ + + D + V V + + QQ+ L+ V V DR ++++IF A A T E
Sbjct: 72 QVDQIVTAAK-DEEIDLVVVDGPLTPI-QQRNLETALDVKVIDRTGLILEIFGARAATAE 129
Query: 207 ARLQIAIAELPY-------LWT---RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKA 256
RLQ+ +A L Y WT R R +RM+ +R KL++
Sbjct: 130 GRLQVELAHLDYQAGRLVRSWTHLERQRGGFGFLGGPGETQIEADRRMI-RDRMAKLRRD 188
Query: 257 LNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTT 316
L ++ R + R +++R +P +A+VGYTN GK+TL LT D ++ ++ LFATLD T
Sbjct: 189 LAQVTRTRGLHRARRKRAPWPVIALVGYTNAGKSTLFNRLTGAD-VMAKDLLFATLDPTM 247
Query: 317 HEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQ 376
+ LP + + DT+GF+S++PT L+ F+ TLE+ AD+I+HV D++ PD ++
Sbjct: 248 RQIELPGIDKAILSDTVGFVSDLPTQLVAAFRATLEEVTAADLILHVRDIAQPDSDSERD 307
Query: 377 HVDETLQHL---ELEE--KILEHVLVVGNKVDAVP-------PGERVTEEYDLLISATRG 424
V+ L + +EE + ++ NK D + E E LISA G
Sbjct: 308 DVERVLAEIGIAPVEEGGEFAIPIIEAWNKSDLLSEEAHESLAAEASRREDVALISAWTG 367
Query: 425 TGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDV 484
G+ L+ + + + A ++I + + G WL H V N +D + + DV
Sbjct: 368 EGIESLRHLISERLSNAHRLRHIDL-PSTEGQAMAWLHAHGEVVNQTMNDQA--QMEFDV 424
Query: 485 VMTDVIMNKFKHEF 498
M+D +F F
Sbjct: 425 RMSDENWGRFIERF 438
>gi|350271101|ref|YP_004882409.1| putative GTP-binding protein HflX [Oscillibacter valericigenes
Sjm18-20]
gi|348595943|dbj|BAK99903.1| putative GTP-binding protein HflX [Oscillibacter valericigenes
Sjm18-20]
Length = 429
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 175/333 (52%), Gaps = 23/333 (6%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQ 196
D ++F G+G + ++ V A V D L QQ++L +L + V DR +++
Sbjct: 58 DPRTFIGEGKVAEVQLYCE---NVGATMVIFDNDLSPSQQRVLTELLGIQVLDRCGLILD 114
Query: 197 IFKAHAKTREARLQIAIAELPYLWTRYR---TIEDATNMNITKGFLDSK----------R 243
IF AKT+E RLQ+ +AE YL R T + KG + SK R
Sbjct: 115 IFAQRAKTKEGRLQVELAEYQYLLPRLTGMWTHLERQGGTSGKGAIGSKGPGETQLETDR 174
Query: 244 MVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLV 303
++ ++ KL+ L ++ R R ++Q+ + P V++VGYTN GK+TL+ LT S+
Sbjct: 175 RLIHKKIDKLRSDLEDVRRVRGTQRQQRQKNEIPVVSIVGYTNAGKSTLLNQLTGA-SIP 233
Query: 304 PRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHV 363
N+LF TLD T+ + + L ++ DT+GFI +P L+E FK TLE+ AD+++HV
Sbjct: 234 ANNRLFDTLDTTSRLLTVSDTLDVVLSDTVGFIRKLPHQLVEAFKATLEELEYADLLLHV 293
Query: 364 VDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLL-ISAT 422
+DVSNP + QQ Q V++ + EL + + V NK D + GE + D++ ISA
Sbjct: 294 IDVSNPGWQQQAQVVEDLIA--ELGASGIPRIEVF-NKCD-LSGGEILPRGEDMVTISAK 349
Query: 423 RGTGLAQLKEKVQDMILKATGRKNITMRVRSGG 455
G G+ +L + + + K R +I + GG
Sbjct: 350 TGEGVQELLQLIDRRLDKGARRVSIHLPYDRGG 382
>gi|227495177|ref|ZP_03925493.1| possible GTP-binding protein HflX [Actinomyces coleocanis DSM
15436]
gi|226831629|gb|EEH64012.1| possible GTP-binding protein HflX [Actinomyces coleocanis DSM
15436]
Length = 543
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 175/348 (50%), Gaps = 28/348 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+D + D ++ GKG + L ++ D V V + L Q
Sbjct: 142 AALAETAGSEVLDGMLQRRDMPDPATYLGKGKAKELA-EIVADCGADTVIVDGE-LAPSQ 199
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI- 234
++ L+D +V V DR +++ IF HA++RE + Q+ +A+L YL R R ++ +
Sbjct: 200 RRGLEDAVKVKVVDRTALILDIFAQHAQSREGKAQVELAQLEYLLPRLRGWGESMSRQAG 259
Query: 235 ----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
TK LD +R + +R KL+ + +K R+ R ++ + P+
Sbjct: 260 GRVAGGEGIGSRGPGETKIELDRRR--IRKRMSKLRNEIAAMKPARDTQRQSRRSGEIPS 317
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+ GYTN GK+TL+ LT + +V +N LFATLD T + + DT+GF+ N
Sbjct: 318 VAIAGYTNAGKSTLLNRLTGAEVMV-QNALFATLDPTVRQTKTDDGRLYTLTDTVGFVRN 376
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+PT L+E F+ TLE+ AD+I+HVVD ++PD + Q + V + ++ +I E ++
Sbjct: 377 LPTQLVEAFRSTLEEVGDADLIVHVVDAAHPDPMGQIKAVHAVFETIDGAMEIPE--IIA 434
Query: 399 GNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILKAT 442
NK D + R + +SA G G+ L+E + M+ + +
Sbjct: 435 LNKADLATEADLAVLRSLLPNSVAVSAHTGAGMGDLQELIAQMLPRPS 482
>gi|456387703|gb|EMF53193.1| GTP-ase [Streptomyces bottropensis ATCC 25435]
Length = 498
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 173/325 (53%), Gaps = 23/325 (7%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V+D I D ++ G G L R V D+ V + L Q L+D+
Sbjct: 111 GALVLDGVIQRRDKPDAATYIGSGKANEL-RDVVLDSGADTVICDGE-LSPGQLIHLEDV 168
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI-------- 234
+V V DR +++ IF HAK+RE + Q+A+A++ Y+ R R + + +
Sbjct: 169 VKVKVIDRTALILDIFAQHAKSREGKAQVALAQMQYMLPRLRGWGQSLSRQMGGGKGGGL 228
Query: 235 -TKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGK 289
T+G ++K R + E+ K+++ + ++K RE+ R +++R K P+VA+ GYTN GK
Sbjct: 229 ATRGPGETKIETDRRRIREKMAKMRREIAEMKTGREIKRQERRRNKVPSVAIAGYTNAGK 288
Query: 290 TTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKV 349
++L+ LT LV N LFATLD T P+ DT+GF+ ++P L+E F+
Sbjct: 289 SSLLNRLTGAGVLV-ENSLFATLDPTVRRAETPSGRLYTLADTVGFVRHLPHHLVEAFRS 347
Query: 350 TLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP-- 407
T+E+ AD+I+HVVD S+P +Q V E ++ + K+ E +VV NK DA P
Sbjct: 348 TMEEVGDADLILHVVDGSHPAPEEQLAAVREVIRDVG-ATKVPE--IVVINKADAADPLT 404
Query: 408 GERV--TEEYDLLISATRGTGLAQL 430
+R+ E+ + +SA G G+A+L
Sbjct: 405 LQRLLRVEKRSIAVSARSGQGIAEL 429
>gi|209885224|ref|YP_002289081.1| GTP-binding proten HflX [Oligotropha carboxidovorans OM5]
gi|209873420|gb|ACI93216.1| GTP-binding proten HflX [Oligotropha carboxidovorans OM5]
Length = 437
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 202/410 (49%), Gaps = 38/410 (9%)
Query: 88 VFVVQPFIKWGK------KMKRNTTRD--FMLAESKALVSSIQGWRVVDSTIISLLSFDK 139
+ VV P+++ + + + RD L E+ L +I V ++ I L
Sbjct: 1 MLVVGPYLRARRGSADIATIGSDAVRDPQARLDEAAGLARAID-LTVAEALIAPLSEIRP 59
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
++ GKG +E + ++ A + V L QQ+ L+ + V DR ++++IF
Sbjct: 60 ATYLGKGKVEDILGLIK--AHDVDLVVMDCALSPIQQRNLEKEWNAKVLDRTGLILEIFG 117
Query: 200 AHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLME 248
AKTRE LQ+ +A L Y R R + T++ +G +++ R ++ E
Sbjct: 118 RRAKTREGTLQVELAHLIY--QRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRMIGE 175
Query: 249 REQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQL 308
R +++ L K++ R + R ++R + VA+VGYTN GK+TL LT D + + L
Sbjct: 176 RITRIENDLKKVQATRRLHRAGRKRVPYRVVALVGYTNAGKSTLFNRLTRAD-VQAADML 234
Query: 309 FATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSN 368
FATLD T LP+ + + DT+GFIS++PT L+ F+ TLE+ + AD+I+HV D+S+
Sbjct: 235 FATLDPTLRALRLPHGGKAMISDTVGFISDLPTMLVAAFRATLEEVIEADVILHVRDISH 294
Query: 369 PDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE----------RVTEEYDLL 418
D Q++ VD L+ L + + ++ V NK+D P E R + L
Sbjct: 295 EDAEAQERDVDHVLRQLGIGTESGHRIIEVWNKIDCFSPEERENLARIAARRPADHPCFL 354
Query: 419 ISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG-GSEYQWLMKHTAV 467
+SA G G+ L +++ + A R + +R+ + G W+ ++ V
Sbjct: 355 VSAETGEGIDALLAAIEERL--AALRTVLELRIDAADGEGISWIHRNAEV 402
>gi|402566394|ref|YP_006615739.1| small GTP-binding protein [Burkholderia cepacia GG4]
gi|402247591|gb|AFQ48045.1| small GTP-binding protein [Burkholderia cepacia GG4]
Length = 391
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 168/316 (53%), Gaps = 28/316 (8%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D K F G G E L+ + DA + + L QQ+ L+ V DR +++
Sbjct: 44 SPDAKMFIGSGKAEELR--LACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLIL 101
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMV 245
IF A++ E +LQ+ +A+L YL TR I T++ KG L++ R +
Sbjct: 102 DIFAQRARSHEGKLQVELAQLQYLSTRL--IRAWTHLERQKGGIGLRGPGETQLETDRRL 159
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR 305
+ ER + LK L++L+ Q R ++ R +V++VGYTN GK+TL ALT +
Sbjct: 160 IGERIKMLKSRLDRLRRQHSTQRRQRARSGTMSVSLVGYTNAGKSTLFNALTKAQAYAA- 218
Query: 306 NQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
+QLFATLD T+ L + + +I+ DT+GFI +P L+ F+ TLE+ + AD+++HVV
Sbjct: 219 DQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVV 278
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP----GERVT-EEYD--- 416
D S+ L+Q + V+ L E+ + VLV NK+DAVP G+ V +EY
Sbjct: 279 DASSAVRLEQIEQVNGVLH--EIGADTIRQVLVF-NKIDAVPELAARGDAVERDEYGNIS 335
Query: 417 -LLISATRGTGLAQLK 431
+ +SA G GL L+
Sbjct: 336 RVFLSARTGQGLDALR 351
>gi|453073966|ref|ZP_21976764.1| gtpase [Rhodococcus triatomae BKS 15-14]
gi|452765452|gb|EME23709.1| gtpase [Rhodococcus triatomae BKS 15-14]
Length = 478
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 169/323 (52%), Gaps = 27/323 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G + L+ V T + L Q L+ + +V V DR +++ I
Sbjct: 101 DAATYIGSGKADELREVVLATGADT--VICDGELTPAQLTALEKVVKVKVIDRTALILDI 158
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HA + E + Q+A+A++ Y+ R R ++ N G +++
Sbjct: 159 FAQHATSSEGKAQVALAQMEYMLPRLRGWGESMSRQAGGRAGSNGGVGLRGPGETKIETD 218
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R + ER KL++ + +K R+ R K+ R P+VA+VGYTN GK++L+ ALT L
Sbjct: 219 RRRIRERMAKLRREIKGMKAARDTKRTKRLRSDVPSVAIVGYTNAGKSSLLNALTGAGVL 278
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V ++ LFATLD TT + P+ + + DT+GF+ ++PT L+E F+ TLE+ AD+++H
Sbjct: 279 V-QDALFATLDPTTRKAEFPDGRQYVLTDTVGFVRHLPTQLVEAFRSTLEEVADADLLLH 337
Query: 363 VVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVVGNKVDAVPPGERVTEEYDLL-- 418
VVD S+P +Q + V E + + E + +LVV NK+DA P +T+ LL
Sbjct: 338 VVDGSDPLPTEQIKAVREVIVDVLRESDAPPPPELLVV-NKIDAADP-VTLTQLRALLTG 395
Query: 419 ---ISATRGTGLAQLKEKVQDMI 438
+SA G G+ L+ + D++
Sbjct: 396 AKFVSARTGDGIEDLRATLADLV 418
>gi|428203084|ref|YP_007081673.1| GTP-binding protein HflX [Pleurocapsa sp. PCC 7327]
gi|427980516|gb|AFY78116.1| GTP-binding protein HflX [Pleurocapsa sp. PCC 7327]
Length = 569
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 183/348 (52%), Gaps = 30/348 (8%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLE--LLKRQVRGDARVTAVFVSV 168
LAE + LV + G V+D+ D ++ G G +E LK Q G A V
Sbjct: 226 LAELERLVDT-AGGEVLDTIRQKRPRPDSQTVVGAGKVEEIALKVQTLG-----ANLVVF 279
Query: 169 DV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY---- 223
D L Q + L+ F + V DR +++ IF A++R +LQ+ +A+L Y+ R
Sbjct: 280 DRDLSPAQVRNLETQFGIRVVDRTEVILDIFAQRAQSRAGKLQVELAQLEYMLPRLTGRG 339
Query: 224 ----RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
R + L+++R + R +L++ +N+L+ R +R ++Q+++ P+V
Sbjct: 340 RAMSRLGGGIGTRGPGETKLETERRTIQRRIARLQQEVNELQAHRSRLRKQRQKKEVPSV 399
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPN-----RLRILYVDTIG 334
A+VGYTN GK+TLI ALT+ + V ++LFATLD TT ++P+ IL DT+G
Sbjct: 400 AIVGYTNAGKSTLINALTNAEVYVA-DRLFATLDPTTRRLLVPDPETGESRTILLTDTVG 458
Query: 335 FISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEH 394
FI +P +L++ F+ TLE+ AD ++HVVD+S+ + Q + V L + L +
Sbjct: 459 FIHELPPSLVDAFRATLEEVTEADALLHVVDLSHRAWHAQLRSVMAILAEMPLTPGPM-- 516
Query: 395 VLVVGNKVDAVPPG--ERVTEEYDL--LISATRGTGLAQLKEKVQDMI 438
L+ NK+D V ER EE+ L ISAT GL L EK+ ++
Sbjct: 517 -LIAFNKIDRVDSETLERAKEEFPLAVFISATERFGLETLTEKLGQLV 563
>gi|332653415|ref|ZP_08419160.1| GTP-binding protein HflX [Ruminococcaceae bacterium D16]
gi|332518561|gb|EGJ48164.1| GTP-binding protein HflX [Ruminococcaceae bacterium D16]
Length = 429
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 172/328 (52%), Gaps = 14/328 (4%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D ++F G+G ++ +++ VR +F + L QQ++L + +V V DR +++
Sbjct: 58 SPDPRTFIGQGKVDEVRQLVRTMGADMVIFD--NALSPSQQRVLGEELKVGVLDRSALIL 115
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTR----YRTIEDATNMNITKGF----LDSKRMVLM 247
IF A+TRE RLQ+ +A+ YL R + +E T+G L++ R +
Sbjct: 116 DIFAQRARTREGRLQVELAQYKYLLPRLIGMWSHLERQEGAIGTRGPGETQLETDRRHIR 175
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
+ KL++ L ++ R R ++++ + P VA+VGYTN GK+TL+ LT + + N+
Sbjct: 176 RKISKLEEELRDVRRVRATQRQRREKNEVPVVAIVGYTNAGKSTLLNKLTGAE-IPANNR 234
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LF TLD TT + + +L DT+GFI +P L+E FK TLE+ AD+++HV+D S
Sbjct: 235 LFDTLDTTTRTLEISDTCTVLLSDTVGFIRKLPHHLVEAFKATLEELSFADLLLHVIDAS 294
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGL 427
NP++ +Q Q VD+ + L E+ V NK D R E + ISA G GL
Sbjct: 295 NPEWREQAQVVDQLILELGAEQTPRIEVF---NKCDKWTGEIRPHGEDIVSISAKTGEGL 351
Query: 428 AQLKEKVQDMILKATGRKNITMRVRSGG 455
+L E + + R I + GG
Sbjct: 352 DKLLEAIGKRLDSGAKRVTIHLPYDKGG 379
>gi|258545977|ref|ZP_05706211.1| GTP-binding protein HflX [Cardiobacterium hominis ATCC 15826]
gi|258518782|gb|EEV87641.1| GTP-binding protein HflX [Cardiobacterium hominis ATCC 15826]
Length = 430
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 181/346 (52%), Gaps = 23/346 (6%)
Query: 104 NTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTA 163
N T D + E ++ G +++ + S + + + G+G E L V+
Sbjct: 19 NRTPDPAVEEEFHQLARSAGAQIIWAERYSRGEAEPRYYIGRGQAEALAEAVKAHDIELV 78
Query: 164 VFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY 223
+F + L Q++ L+ L V DR +V+ IF A++ E +LQ+ +A+L +L TR
Sbjct: 79 IFNAP--LSPSQERNLEKLCSARVLDRSGLVLDIFAQRARSHEGKLQVELAQLNHLATRL 136
Query: 224 RTIEDATNMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQR 273
+ T++ KG L++ R +L R ++L++ L +++ QRE R + R
Sbjct: 137 --VRGWTHLERQKGGIGLRGPGETQLETDRRLLAARIKQLQRRLARVQKQREENRKARLR 194
Query: 274 QKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTI 333
+ PTVA+ GYTN GK+TL LT+ D + ++QLFATLD T + IL DT+
Sbjct: 195 RDIPTVALAGYTNSGKSTLFNTLTEAD-VYAQDQLFATLDPTWRKLQHSGPQTILMADTV 253
Query: 334 GFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILE 393
GF+S++P L+ F TLE+ AD+++HV+DV++P +L++++ V++ L+ ++ +
Sbjct: 254 GFVSDLPHELVAAFSATLEETARADLLLHVIDVADPHHLEREEVVEDVLKSIDAADVP-- 311
Query: 394 HVLVVGNKVDAVPPGERVTEEYD-----LLISATRGTGLAQLKEKV 434
L V NK+D RV D + +SA G G+ L + +
Sbjct: 312 -TLRVYNKIDLRGEAPRVKPGADGKAEAVFLSALTGAGVDLLTDAI 356
>gi|334129948|ref|ZP_08503751.1| GTP-binding protein HflX [Methyloversatilis universalis FAM5]
gi|333444984|gb|EGK72927.1| GTP-binding protein HflX [Methyloversatilis universalis FAM5]
Length = 421
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 172/317 (54%), Gaps = 28/317 (8%)
Query: 136 SFDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIV 194
S D +F GKG + E+L G+A + V + + L QQ+ L+ Q V DR ++
Sbjct: 51 SPDPATFAGKGKVAEILDLANAGEADI--VLFNHE-LSPAQQRNLERALQRRVIDRNALI 107
Query: 195 IQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRM 244
+ IF A++ E +LQ+ +A+L +L TR + T++ KG L++ R
Sbjct: 108 LDIFALRARSHEGKLQVELAQLEHLSTRL--VRGWTHLERQKGGIGLRGPGETQLETDRR 165
Query: 245 VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVP 304
+L R + LK+ L K++ QR + R ++R+ P VA+VGYTN GK+TL ALT +
Sbjct: 166 LLGVRVKALKERLAKVERQRGVRRKSRERRATPVVALVGYTNAGKSTLFNALTKAGTYAA 225
Query: 305 RNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
+QLFATLD T+ + L +++ DT+GFI ++P TL+ F TLE+ AD+++HV+
Sbjct: 226 -DQLFATLDTTSRQLYLGEFGQVVLSDTVGFIRDLPHTLVAAFHATLEETAGADLLLHVI 284
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP---PGERVTEEYDLL--- 418
D S PD Q + VD L E+ + + V+ NK+D +P PG D +
Sbjct: 285 DASAPDRDAQIEAVDRVLA--EVGADAVPQIRVL-NKIDLMPALAPGADAG-GCDTIQTV 340
Query: 419 -ISATRGTGLAQLKEKV 434
+SA G GLA+L+ V
Sbjct: 341 RVSARTGAGLAELRAAV 357
>gi|302558005|ref|ZP_07310347.1| GTP-binding protein [Streptomyces griseoflavus Tu4000]
gi|302475623|gb|EFL38716.1| GTP-binding protein [Streptomyces griseoflavus Tu4000]
Length = 589
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 173/325 (53%), Gaps = 23/325 (7%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V+D I D ++ G G E L R V D V + L Q L+D+
Sbjct: 110 GALVLDGVIQRRDKPDAATYIGSGKAEEL-RDVVLDTGADTVICDGE-LSPGQLIHLEDV 167
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI-------- 234
+V V DR +++ IF HAK+RE + Q+A+A++ Y+ R R + + +
Sbjct: 168 VKVKVIDRTALILDIFAQHAKSREGKAQVALAQMQYMLPRLRGWGQSLSRQMGGGKGGGL 227
Query: 235 -TKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGK 289
T+G ++K R + E+ K+++ + ++K RE+ R +++R K P+VA+ GYTN GK
Sbjct: 228 ATRGPGETKIETDRRRIREKMAKMRREIAEMKTGREIKRQERRRHKVPSVAIAGYTNAGK 287
Query: 290 TTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKV 349
++L+ LT LV N LFATLD T P+ DT+GF+ ++P L+E F+
Sbjct: 288 SSLLNRLTGAGVLV-ENALFATLDPTVRRAETPSGRLYTLADTVGFVRHLPHHLVEAFRS 346
Query: 350 TLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP-- 407
T+E+ AD+I+HVVD S+P +Q V E ++ ++ + ++V+ NK DA P
Sbjct: 347 TMEEVGDADLILHVVDGSHPVPEEQLAAVREVIR--DVGATGVPEIVVI-NKADAADPLT 403
Query: 408 GERV--TEEYDLLISATRGTGLAQL 430
+R+ E+ + +SA G G+A+L
Sbjct: 404 LQRLLRVEKRSIAVSARTGRGMAEL 428
>gi|383788394|ref|YP_005472963.1| putative GTP-binding protein HflX [Caldisericum exile AZM16c01]
gi|381364031|dbj|BAL80860.1| putative GTP-binding protein HflX [Caldisericum exile AZM16c01]
Length = 421
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 211/410 (51%), Gaps = 26/410 (6%)
Query: 107 RDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR-GDARVTAVF 165
R+ L E + LV ++ + +V T SL +F G G +E LK+ + DA++ +
Sbjct: 22 REEYLEEFRLLVETL-SYEIVAETTYSLREPRYSTFLGTGKIEELKKLAQLTDAKIVFID 80
Query: 166 VSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAEL----PYLWT 221
++ L+L L VPV DR +++ IF A+T EA+LQ+ +++L P +
Sbjct: 81 TTLTFLQLRN---LSKELGVPVVDRPHLILMIFSMRARTTEAKLQVELSQLKMRLPEIVH 137
Query: 222 RYRTIEDATNMNI-TKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
++ T + KG + KR + +R Q L+K L ++K R +R ++ +
Sbjct: 138 EDVDLDQQTGSEMGLKGPGERKTELKRRYIAKRIQILEKKLEEIKKHRVEIRKRRTKSSI 197
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P +++VGYTN GK+TL+ LT ++ V ++LFATLD + G + + ++VDTIGFI
Sbjct: 198 PIISIVGYTNAGKSTLLNTLTQSEAYV-EDKLFATLDSLSRVGEIKQNISAIFVDTIGFI 256
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++P L+ F TLE+ + + IIIH+VD S+P + + + V TL+ L ++
Sbjct: 257 RDLPPQLIYAFHSTLEEILDSWIIIHLVDASDPLFRDKMEVVLCTLKDLGASNI---PII 313
Query: 397 VVGNKVDAV--PPGERVTEEYD--LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVR 452
V NK+D + P + + Y + ISA G+ QLKE++ +M+ + R I + +
Sbjct: 314 TVFNKIDKIGEEPLKYLQSIYKDAIFISAKESIGIDQLKERLANMLSELIVRVKIVLPYK 373
Query: 453 SGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSR 502
L + V+N+ + E+++L V + KFK+ F S R
Sbjct: 374 DA----HLLDEIYTVANVISRKDTEENIILYVEGYYSNLGKFKNYFSSQR 419
>gi|315650683|ref|ZP_07903739.1| GTP-binding protein [Lachnoanaerobaculum saburreum DSM 3986]
gi|315487060|gb|EFU77386.1| GTP-binding protein [Lachnoanaerobaculum saburreum DSM 3986]
Length = 415
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 173/328 (52%), Gaps = 18/328 (5%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V++ I S ++ GKG +E +K ++ + T V V D L Q + L+DL
Sbjct: 39 GAVVLECIIQSREKIHPGTYLGKGKIEEVKDRIT-ELEATGV-VCDDELTPAQLRNLEDL 96
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNI 234
V DR M+++ IF A T E ++Q+ +A+L + R R
Sbjct: 97 LNTKVMDRTMVILDIFAKRAVTSEGKIQVELAQLKFSAARLVGLRSSLSRLGGGIGTRGP 156
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ L+ R ++ +R +LK L K++ RE++R + VA+VGYTN GK+TL+
Sbjct: 157 GEKKLEMDRRLINDRISQLKSELKKVESHRELIRKSRDENFAFNVAIVGYTNAGKSTLLN 216
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LTD + ++ ++LFATLD TT + L + IL DT+GFI +P L+E FK TLE+A
Sbjct: 217 KLTDAN-ILAEDKLFATLDPTTRKLKLDSGQEILVTDTVGFIRKLPHHLIEAFKSTLEEA 275
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEE 414
A+++IH+VD SN + Q V +TL+ L++ +K ++ V NK D + +
Sbjct: 276 KYANLLIHMVDASNEEASSQMLVVYDTLRSLDVVDK---DIITVFNKTDLTDKDMELPRD 332
Query: 415 YD----LLISATRGTGLAQLKEKVQDMI 438
+ L +SA G G+ LK+ +++++
Sbjct: 333 FHADKILRMSAKTGEGIEDLKKTIENIL 360
>gi|419720558|ref|ZP_14247779.1| GTP-binding protein HflX [Lachnoanaerobaculum saburreum F0468]
gi|383303220|gb|EIC94684.1| GTP-binding protein HflX [Lachnoanaerobaculum saburreum F0468]
Length = 415
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 172/328 (52%), Gaps = 18/328 (5%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V++ I S ++ GKG +E ++ ++ + T V V D L Q + L+DL
Sbjct: 39 GAVVLECIIQSREKIHPGTYLGKGKIEEVRDRI-TELEATGV-VCDDELTPAQLRNLEDL 96
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNI 234
V DR M+++ IF A T E ++Q+ +A+L + R R
Sbjct: 97 LNTKVMDRTMVILDIFAKRASTSEGKIQVELAQLKFSAARLVGLRSSLSRLGGGIGTRGP 156
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ L+ R ++ +R +LK L K++ RE++R + VA+VGYTN GK+TL+
Sbjct: 157 GEKKLEMDRRLINDRISQLKSELKKVESHRELIRKSRDENFAFNVAIVGYTNAGKSTLLN 216
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LTD + ++ ++LF TLD TT + L + IL DT+GFI +P L+E FK TLE+A
Sbjct: 217 KLTDAN-ILAEDKLFVTLDPTTRKLKLDSGQEILVTDTVGFIRKLPHHLIEAFKSTLEEA 275
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEE 414
A+++IH+VD SN + Q V ETL+ L++ +K ++ V NK D + +
Sbjct: 276 KYANLLIHMVDASNEEASSQMLVVYETLRSLDVVDK---DIITVFNKTDLTDKDKEFPRD 332
Query: 415 YD----LLISATRGTGLAQLKEKVQDMI 438
+ L +SA G G+ LK+ +++++
Sbjct: 333 FHADKILRMSAKTGEGIEDLKKTIENIL 360
>gi|387824411|ref|YP_005823882.1| GTP-binding protein HflX [Francisella cf. novicida 3523]
gi|328676010|gb|AEB28685.1| GTP-binding protein HflX [Francisella cf. novicida 3523]
Length = 435
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 171/313 (54%), Gaps = 28/313 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F G G +E++K + D + V L Q++ ++ + V DR ++++I
Sbjct: 56 DIKYFCGMGKIEMIKN--KRDELEADLVVFNHPLTPSQERNIEKFLECRVMDRTRLILEI 113
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVL 246
F AKT E +LQ+ +A+L Y TR + T++ KG L+ R ++
Sbjct: 114 FSLRAKTYEGKLQVELAQLNYQSTR--LVRGWTHLERQKGGIGVRGGPGETQLEIDRRLI 171
Query: 247 MEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRN 306
+R +++ + L K+K R++ R+ +++ PT++ VGYTN GK+TL +T+ D L ++
Sbjct: 172 RQRIKQITQKLEKVKHHRDLSRSSRKKNNIPTISFVGYTNAGKSTLFNKITNADVLA-KD 230
Query: 307 QLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
QLFATLD T + ++P +++ DT+GFI N+P L+E F TLE+A+ +D+++HV+D
Sbjct: 231 QLFATLDPTLRKVIVPKLGEVIFSDTVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDY 290
Query: 367 SNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA---VPPGERVTEEYD------L 417
++ D+ + V++ L + + +K + V NK+D + P E+ D +
Sbjct: 291 ADEDHKSYIEQVEKVLSEIGIADK---ETICVYNKIDKLENINPSFVPLEDSDNSVVARV 347
Query: 418 LISATRGTGLAQL 430
+SA G GLA+
Sbjct: 348 YLSAQNGDGLAEF 360
>gi|330817161|ref|YP_004360866.1| Small GTP-binding protein [Burkholderia gladioli BSR3]
gi|327369554|gb|AEA60910.1| Small GTP-binding protein [Burkholderia gladioli BSR3]
Length = 400
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 182/345 (52%), Gaps = 28/345 (8%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E +L++S G R + S D F G G E L+ + DA + + L
Sbjct: 26 EELSLLASSAGARPAVTLTGRRSSPDAAMFIGSGKAEELR--LACDANDVDIVIFNHPLA 83
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
QQ+ L+ V DR +++ IF A++ E +LQ+ +A+L YL TR I T++
Sbjct: 84 PAQQRNLERTLNRRVVDRTSLILDIFAQRARSHEGKLQVELAQLQYLSTRL--IRAWTHL 141
Query: 233 NITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
KG L++ R ++ ER + LK L+KL+ Q R +++R + ++++V
Sbjct: 142 ERQKGGIGLRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHNTQRRQRERNRTMSMSLV 201
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPT 341
GYTN GK+TL ALT + +QLFATLD T+ + + + +I+ DT+GFI +P
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAA-DQLFATLDTTSRRVYIGDEVGQIVVSDTVGFIRELPH 260
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
L+ F+ TLE+ + AD+++HVVD S+ L+Q + V++ L E+ + VLV NK
Sbjct: 261 QLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLH--EIGADAIRQVLVF-NK 317
Query: 402 VDAVPP----GERVT-EEYD----LLISATRGTGLAQLKEKVQDM 437
+DAVP G+ V +EY + +SA G GL L+ + ++
Sbjct: 318 IDAVPELAARGDAVERDEYGNISRVFLSARTGQGLDTLRAAIAEI 362
>gi|323141020|ref|ZP_08075926.1| GTP-binding protein HflX [Phascolarctobacterium succinatutens YIT
12067]
gi|322414468|gb|EFY05281.1| GTP-binding protein HflX [Phascolarctobacterium succinatutens YIT
12067]
Length = 610
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 184/361 (50%), Gaps = 27/361 (7%)
Query: 78 QTG----ALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIIS 133
QTG A GT+ + V +++G T + L E K L + G VV +
Sbjct: 181 QTGSASLAQGTERAIIV---GMEYGAPNSSGWTAEDSLEELKQLADT-AGAEVVARFLQK 236
Query: 134 LLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMI 193
D F G+G ++ L V+ + +F D L QQ+ ++ V V DR +
Sbjct: 237 RPKPDPAFFIGRGKVQELALYVQQENVDLCIFD--DELSPAQQRNIEQSMGVRVLDRTAL 294
Query: 194 VIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMV 245
++ IF A T E +LQ+ +A+L Y R R + L+ R
Sbjct: 295 ILDIFAQRAHTNEGKLQVELAQLQYTLPRIMGKGLALSRLGGGIGTRGPGETKLEVDRRR 354
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR 305
+ +R +K+ + K+K R + R + + PTV++VGYTN GK+TL+ LT+ D + +
Sbjct: 355 IRDRIAYIKECIGKVKSVRTLHRAGRAKASVPTVSLVGYTNAGKSTLLNTLTNSD-IYAQ 413
Query: 306 NQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVD 365
+QLFATLD TT + LPN+ + + DT+GFI +P L+ F+ TLE+ + +D+++HV+D
Sbjct: 414 DQLFATLDPTTRQLDLPNKQQAILTDTVGFIQRLPHQLVAAFQSTLEEVVQSDVLLHVID 473
Query: 366 VSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP----GERVT-EEYDLLIS 420
VS+ Y +Q V + L L ++K ++ V NK+D +PP ER++ EE + IS
Sbjct: 474 VSHELYKEQAAAVYQVLDELGAKDKT---IITVYNKIDKLPPDSGLAERLSKEENSICIS 530
Query: 421 A 421
A
Sbjct: 531 A 531
>gi|416155578|ref|ZP_11603990.1| GTP-binding proten HflX [Moraxella catarrhalis 101P30B1]
gi|416221129|ref|ZP_11625695.1| GTP-binding proten HflX [Moraxella catarrhalis 103P14B1]
gi|416247632|ref|ZP_11635815.1| GTP-binding proten HflX [Moraxella catarrhalis BC8]
gi|326565439|gb|EGE15611.1| GTP-binding proten HflX [Moraxella catarrhalis 103P14B1]
gi|326569444|gb|EGE19504.1| GTP-binding proten HflX [Moraxella catarrhalis BC8]
gi|326577052|gb|EGE26947.1| GTP-binding proten HflX [Moraxella catarrhalis 101P30B1]
Length = 469
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 161/298 (54%), Gaps = 26/298 (8%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+ L + V DR +++ IF A+T E +LQ+ +A+L +L TR + T++
Sbjct: 98 QERNLESLIKCRVLDRTGLILDIFAQRARTHEGKLQVELAQLNHLATRL--VRGWTHLER 155
Query: 235 TKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGY 284
KG L++ R +L R +LK L+K+K R+ R K+Q+ PT+++VGY
Sbjct: 156 QKGGIGLRGPGETQLETDRRLLQIRVTQLKAKLDKVKQTRKQGRAKRQKSDIPTISLVGY 215
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
TN GK+TL LTDD+ + +QLFATLD T P ++ DT+GF+ ++P L+
Sbjct: 216 TNAGKSTLFNRLTDDN-IYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFVRHLPHELV 274
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA 404
E F TLE+ + AD+++HV+D ++ D Q + V++ L+ ++ + I L+V NK+D
Sbjct: 275 ESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQADAPI----LLVFNKIDK 330
Query: 405 VPPGERVTEEYD-------LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGG 455
GE Y + +SA G+ QL VQ+++ +T+ +G
Sbjct: 331 --SGEPAKIHYQDHGVPHRVYVSAKENLGINQLMLAVQELLSGQLNHYTLTLPHHAGA 386
>gi|78187214|ref|YP_375257.1| GTP-binding protein HflX [Chlorobium luteolum DSM 273]
gi|78167116|gb|ABB24214.1| GTP-binding protein HflX [Chlorobium luteolum DSM 273]
Length = 435
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 193/399 (48%), Gaps = 37/399 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G VV + I D G+G ++ L + D +F D L Q
Sbjct: 38 AFLADTAGADVVRTLIQERKLRDPAYCIGRGKVDELLEMTKEDQVDIVIFD--DDLTPGQ 95
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNIT 235
+ L+ V DR +++QIF AK+ +A++Q+ +A+L YL R T+++
Sbjct: 96 TRNLERALDCKVIDRTGLILQIFAIRAKSHQAKMQVELAQLEYLLPRLSG--QWTHLSKQ 153
Query: 236 KGFLDSK----------RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYT 285
KG + +K R ++ R LK+ L + Q + R+ P VA+VGYT
Sbjct: 154 KGGIGTKGPGETQIETDRRLVRNRIASLKQKLRDVSLQHDT--QTGSRRSVPRVALVGYT 211
Query: 286 NCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLE 345
N GK+TL+ L D ++LFATLD T L +L DT+GFI +P TL+E
Sbjct: 212 NAGKSTLMNQLCPDAGAYAEDRLFATLDTRTRRLELKINKLVLLSDTVGFIRKLPHTLVE 271
Query: 346 PFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV 405
F+ TL++ + AD ++HVVD+S+P + +Q Q V TL+ + ++ +H++ V NK+DA+
Sbjct: 272 SFRSTLDEVLQADFLLHVVDLSHPGFEEQMQVVQSTLREIGVKH---QHIIDVFNKIDAL 328
Query: 406 PPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQ- 459
R + ISA RG L L+E + + + GR R+R ++Y+
Sbjct: 329 ADPSVLRDLRARYPDAVFISAARGINLTALRECIAEHV----GRDYSERRIRVHVADYKI 384
Query: 460 --WLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKH 496
+L +HT V+ R D E + V N+ KH
Sbjct: 385 IGYLYEHTEVTGRRCVDEEVE------LTYRVHKNRLKH 417
>gi|381182480|ref|ZP_09891284.1| GTP-binding protein [Listeriaceae bacterium TTU M1-001]
gi|380317612|gb|EIA20927.1| GTP-binding protein [Listeriaceae bacterium TTU M1-001]
Length = 405
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 194/374 (51%), Gaps = 16/374 (4%)
Query: 109 FMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSV 168
+ + E LV + G V++ + + K+S+ G+G LE LK V T VF S
Sbjct: 23 YSMEELGRLVDTANG-EVINQMVQKMERVRKESYIGRGKLEELKNLVLETKADTVVFNSE 81
Query: 169 DVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY----- 223
L Q + ++ + DR +++ IF AK+RE +LQ+A A+ YL R
Sbjct: 82 --LTPSQIRNIEAEVDAKIIDRTSLILDIFAMRAKSREGKLQVAYAQYEYLLPRLSGQGS 139
Query: 224 ---RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
+ + L+ R +L + ++K+ L +++ RE +R K+++
Sbjct: 140 SLSKLGGGIGTRGPGETKLEMDRRLLRLKMHQIKEELTQVEKHRERIREKRKQNGVFRFG 199
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
++GYTN GK+T+ LT ++L +QLFATLD TT + L N +L DT+GFI ++P
Sbjct: 200 LIGYTNAGKSTIFNQLTKAETL-EEDQLFATLDPTTRKMKLVNGFEVLLTDTVGFIQDLP 258
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
T+L+ FK TLE++ D+++HVVD SN DY++ + V + LQ L++ + VL + N
Sbjct: 259 TSLVAAFKSTLEESADMDMLLHVVDSSNADYMKHIKTVKDILQALQISDI---PVLTLYN 315
Query: 401 KVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQW 460
K D P TE ++ ISA +++E++ + + K +T++ S G++ +
Sbjct: 316 KKDKQHPTFVATEANNMEISALHMNFPNEMRERLLEEVKKIWIPYFLTVKA-SEGTKIAF 374
Query: 461 LMKHTAVSNIREDD 474
L + T +S + D+
Sbjct: 375 LKRATYISKMDFDE 388
>gi|377832202|ref|ZP_09815166.1| GTP-binding protein HflX [Lactobacillus mucosae LM1]
gi|377554209|gb|EHT15924.1| GTP-binding protein HflX [Lactobacillus mucosae LM1]
Length = 409
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 166/314 (52%), Gaps = 24/314 (7%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
++ + E AL + Q V+D +L + ++FG G +E L+ +A A ++
Sbjct: 7 EYSMEELAALAEANQ-MEVIDRLDQALDRPNPATYFGSGKVEELRH--LAEAEEVATVIA 63
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIE 227
D L Q + L D V + DR ++++IF A++REA++Q+ IA+L Y R +T
Sbjct: 64 NDELTPSQLQNLADQTGVRILDRTALILEIFAKRAQSREAKIQVEIAQLQYQLPRLQTAA 123
Query: 228 DA------------TNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQK 275
+ TN + L+ R + + L+ L ++ ++ R K+++
Sbjct: 124 NQRLDQQTGGGSGFTNRGAGETKLEMNRRTINHKISHLRAELKEIAKSEDVKRAKREKSD 183
Query: 276 FPTVAVVGYTNCGKTTLIKAL------TDDDSLVPRNQLFATLDVTTHEGMLPNRLRILY 329
PT A+VGYTN GK+T++ L +++ + +N LFATLD + + LP++ R L
Sbjct: 184 TPTAALVGYTNAGKSTIMNQLVSRFGVSEEKQVFEKNMLFATLDTSVRQLTLPDQKRFLL 243
Query: 330 VDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEE 389
DT+GF+S +PT L+E FK TL +A AD++I V+D S+P+Y + ++TL+ + +E
Sbjct: 244 SDTVGFVSKLPTHLIEAFKSTLAEAASADLLIQVIDYSDPNYEAMMRTTEKTLKQIGIEN 303
Query: 390 KILEHVLVVGNKVD 403
+ L V NK D
Sbjct: 304 IPM---LYVFNKAD 314
>gi|254374455|ref|ZP_04989937.1| GTP-binding protein [Francisella novicida GA99-3548]
gi|385793024|ref|YP_005826000.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|151572175|gb|EDN37829.1| GTP-binding protein [Francisella novicida GA99-3548]
gi|332678349|gb|AEE87478.1| GTP-binding protein HflX [Francisella cf. novicida Fx1]
Length = 435
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 172/313 (54%), Gaps = 28/313 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F G G +E++K + D + V L Q++ ++ + V DR ++++I
Sbjct: 56 DIKYFCGMGKIEMIKN--KRDELEADLVVFNHPLTPSQERNIEKFLECRVMDRTRLILEI 113
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVL 246
F AKT E +LQ+ +A+L Y TR ++ T++ KG L+ R ++
Sbjct: 114 FSLRAKTYEGKLQVELAQLNYQSTR--LVKGWTHLERQKGGIGVRGGPGETQLEIDRRLI 171
Query: 247 MEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRN 306
+R +++ + L K+K R++ R+ +++ PT++ VGYTN GK+TL +T+ D L ++
Sbjct: 172 RQRIKQITQKLEKVKHHRDLSRSSRKKNNIPTISFVGYTNAGKSTLFNKITNADVLA-KD 230
Query: 307 QLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
QLFATLD T + ++P +++ DT+GFI N+P L+E F TLE+A+ +D+++HV+D
Sbjct: 231 QLFATLDPTLRKVIVPKLGEVIFSDTVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDY 290
Query: 367 SNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA---VPPGERVTEEYD------L 417
++ D+ + V++ L + + +K + V NK+D + P E+ D +
Sbjct: 291 ADEDHKSYIEQVEKVLSEIGIADK---ETICVYNKIDKLENIKPSFVPLEDSDSSVVARV 347
Query: 418 LISATRGTGLAQL 430
+SA G GL +L
Sbjct: 348 YLSAQNGDGLVEL 360
>gi|441518636|ref|ZP_21000351.1| GTP-binding protein HflX [Gordonia hirsuta DSM 44140 = NBRC 16056]
gi|441454450|dbj|GAC58312.1| GTP-binding protein HflX [Gordonia hirsuta DSM 44140 = NBRC 16056]
Length = 474
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 200/393 (50%), Gaps = 29/393 (7%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G +V+D+ I D ++ G G E L+ V T + L Q L+ +
Sbjct: 84 GSQVLDAVIQRRPKPDAATYLGSGKAEELREIVLATGADT--VICDGELTPAQLTALERV 141
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNI 234
+V V DR +++ IF HA +RE + Q+++A++ Y+ R R ++ N
Sbjct: 142 VKVKVIDRTALILDIFAQHATSREGKAQVSLAQMEYMLPRLRGWGESMSRQAGGRAGSNG 201
Query: 235 TKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
G +++ R + ER KL+K + +K R + R ++ R P + VVGYTN
Sbjct: 202 GVGLRGPGETKIETDRRRIRERMAKLRKEIRGMKTARTVKRAQRSRGPVPALTVVGYTNA 261
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GK++L+ A+T LV ++ LFATLD TT L + +++ DT+GF+ ++PT L+E F
Sbjct: 262 GKSSLVNAMTGSGVLV-QDALFATLDPTTRRARLADGHEVVFTDTVGFVRHLPTQLVEAF 320
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKI-LEHVLVVGNKVDAVP 406
+ TLE+A+ AD++IHVVD ++ +Q V L + +E+I L+V NK+DAV
Sbjct: 321 RSTLEEAVHADLLIHVVDGADAFPDKQISAVRNVLNEVFDDEEIDPPPELLVINKIDAVD 380
Query: 407 PGERVTE---EY--DLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWL 461
R+T+ EY + +SA G G+ +L ++ + + +A + + S G L
Sbjct: 381 AA-RMTQLRAEYRDAVFVSARTGEGIDELFARITEFV-EAGDVEAVLAVPFSRGEVMARL 438
Query: 462 MKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKF 494
+H +++ E D +AE + V M I ++
Sbjct: 439 HQH---AHVLETDHTAEGTRVRVRMPKAIAAEY 468
>gi|220934077|ref|YP_002512976.1| GTP-binding proten HflX [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219995387|gb|ACL71989.1| GTP-binding proten HflX [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 417
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 168/313 (53%), Gaps = 19/313 (6%)
Query: 104 NTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTA 163
++ RD +E LV+S G V S D + F G G E ++ QV +A+
Sbjct: 5 DSPRDDDCSEFTELVNSA-GAEPVALITGPRQSPDPRLFVGSGKAEEIREQV--EAQGAE 61
Query: 164 VFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY 223
V + L Q++ L+ LF+ V DR +++ IF A++ E +LQ+ +A+L ++ TR
Sbjct: 62 VVIFDHELSPSQERNLERLFKCRVLDRTGLILDIFAQRARSHEGKLQVELAQLRHMSTRL 121
Query: 224 RTIEDATNMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQR 273
+ T++ KG L++ R +L R +++ + L K++ QRE R ++R
Sbjct: 122 --VRGWTHLERQKGGIGLRGPGETQLETDRRLLAGRIKQILRRLEKVEAQREQGRQSRRR 179
Query: 274 QKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTI 333
+ PTV++VGYTN GK+TL LT+ + +QLFATLD T LP++ I+ DT+
Sbjct: 180 AEIPTVSLVGYTNAGKSTLFNRLTNA-GVYAADQLFATLDPTLRRVDLPDQQAIILADTV 238
Query: 334 GFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILE 393
GF+ +P L+ FK TL + A +++HVVD ++P Q V+ L+ + E +
Sbjct: 239 GFVRQLPHDLVAAFKATLTETREASLLLHVVDAADPRREDNIQQVNNVLEEIGAAE--VP 296
Query: 394 HVLVVGNKVDAVP 406
+LV NK+DA+P
Sbjct: 297 RILVY-NKIDALP 308
>gi|419955623|ref|ZP_14471748.1| GTP-binding protein HflX [Pseudomonas stutzeri TS44]
gi|387967536|gb|EIK51836.1| GTP-binding protein HflX [Pseudomonas stutzeri TS44]
Length = 433
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 174/317 (54%), Gaps = 28/317 (8%)
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
K G G +E L+ V + V V + L Q++ L+ + + V DR +++ IF
Sbjct: 56 KFLIGTGKVEELRDLVH-EGEVELVIFN-HTLTPSQERNLERVLECRVLDRTGLILDIFA 113
Query: 200 AHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLMER 249
A+T E +LQ+ +A+L ++ TR + T++ KG L++ R +L R
Sbjct: 114 QRARTHEGKLQVELAQLEHMSTRL--VRGWTHLERQKGGIGLRGPGETQLETDRRLLRVR 171
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
+++K+ L K++GQRE R ++R P+V++VGYTN GK+TL ALT+ + + NQLF
Sbjct: 172 IRQIKQRLEKVRGQREQARRGRKRADIPSVSLVGYTNAGKSTLFNALTEAE-VYAANQLF 230
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T LP+ ++ DT+GFI ++P L+E F+ TLE++ AD+++HV+D P
Sbjct: 231 ATLDPTLRRLELPDVGPVILADTVGFIRHLPHKLVESFRATLEESSNADLLLHVIDAHEP 290
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD---AVPPGERVTEEYD-----LLISA 421
+ QQ + V L + +E VL + NKVD + P ++ + D + +SA
Sbjct: 291 ERDQQIEQVLAVLAEIGADEL---PVLEIYNKVDLMEGIEP--QIQRDADGRPQRVWVSA 345
Query: 422 TRGTGLAQLKEKVQDMI 438
G GL L++ + +++
Sbjct: 346 RDGLGLDLLRQAIAELL 362
>gi|416231154|ref|ZP_11628699.1| GTP-binding proten HflX [Moraxella catarrhalis 46P47B1]
gi|416254498|ref|ZP_11638764.1| GTP-binding proten HflX [Moraxella catarrhalis O35E]
gi|326559950|gb|EGE10348.1| GTP-binding proten HflX [Moraxella catarrhalis 46P47B1]
gi|326577428|gb|EGE27312.1| GTP-binding proten HflX [Moraxella catarrhalis O35E]
Length = 469
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 161/298 (54%), Gaps = 26/298 (8%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+ L + V DR +++ IF A+T E +LQ+ +A+L +L TR + T++
Sbjct: 98 QERNLESLIKCRVLDRTGLILDIFAQRARTHEGKLQVELAQLNHLATRL--VRGWTHLER 155
Query: 235 TKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGY 284
KG L++ R +L R +LK L+K+K R+ R K+Q+ PT+++VGY
Sbjct: 156 QKGGIGLRGPGETQLETDRRLLQIRVTQLKAKLDKVKQTRKQGRAKRQKSDIPTISLVGY 215
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
TN GK+TL LTDD+ + +QLFATLD T P ++ DT+GF+ ++P L+
Sbjct: 216 TNAGKSTLFNHLTDDN-IYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFVRHLPHELV 274
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA 404
E F TLE+ + AD+++HV+D ++ D Q + V++ L+ ++ + I L+V NK+D
Sbjct: 275 ESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQADAPI----LLVFNKIDK 330
Query: 405 VPPGERVTEEYD-------LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGG 455
GE Y + +SA G+ QL VQ+++ +T+ +G
Sbjct: 331 --SGEPAKIHYQDHGVPHRVYVSAKENLGINQLMLAVQELLSGQLNHYTLTLPHHAGA 386
>gi|296112906|ref|YP_003626844.1| GTP-binding proten HflX [Moraxella catarrhalis RH4]
gi|295920600|gb|ADG60951.1| GTP-binding proten HflX [Moraxella catarrhalis BBH18]
Length = 469
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 161/298 (54%), Gaps = 26/298 (8%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+ L + V DR +++ IF A+T E +LQ+ +A+L +L TR + T++
Sbjct: 98 QERNLESLIKCRVLDRTGLILDIFAQRARTHEGKLQVELAQLNHLATRL--VRGWTHLER 155
Query: 235 TKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGY 284
KG L++ R +L R +LK L+K+K R+ R K+Q+ PT+++VGY
Sbjct: 156 QKGGIGLRGPGETQLETDRRLLQIRVTQLKAKLDKVKQTRKQGRAKRQKSDIPTISLVGY 215
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
TN GK+TL LTDD+ + +QLFATLD T P ++ DT+GF+ ++P L+
Sbjct: 216 TNAGKSTLFNHLTDDN-IYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFVRHLPHELV 274
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA 404
E F TLE+ + AD+++HV+D ++ D Q + V++ L+ ++ + I L+V NK+D
Sbjct: 275 ESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQADAPI----LLVFNKIDK 330
Query: 405 VPPGERVTEEYD-------LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGG 455
GE Y + +SA G+ QL VQ+++ +T+ +G
Sbjct: 331 --SGEPAKIHYQDHGVPHRVYVSAKENLGINQLMLAVQELLSGQLNHYTLTLPHHAGA 386
>gi|171321329|ref|ZP_02910288.1| GTP-binding proten HflX [Burkholderia ambifaria MEX-5]
gi|171093386|gb|EDT38574.1| GTP-binding proten HflX [Burkholderia ambifaria MEX-5]
Length = 396
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 176/339 (51%), Gaps = 28/339 (8%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E +L++S G R S D K F G G E L+ + DA + + L
Sbjct: 26 EELSLLASSAGARPAVILTGRRASPDAKMFIGSGKAEELR--LACDAHNVEIVIFNHALA 83
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
QQ+ L+ V DR +++ IF A++ E +LQ+ +A+L YL TR I T++
Sbjct: 84 PAQQRNLEQALNRRVVDRTSLILDIFAQRARSHEGKLQVELAQLQYLSTRL--IRAWTHL 141
Query: 233 NITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
KG L++ R ++ ER + LK L++L+ Q R ++ R +V++V
Sbjct: 142 ERQKGGIGLRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSGTMSVSLV 201
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPT 341
GYTN GK+TL ALT + +QLFATLD T+ L + + +I+ DT+GFI +P
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAA-DQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPH 260
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
L+ F+ TLE+ + AD+++HVVD S+ L+Q + V+ L E+ + VLV NK
Sbjct: 261 QLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLH--EIGADTIRQVLVF-NK 317
Query: 402 VDAVPP----GERVT-EEYD----LLISATRGTGLAQLK 431
+DAVP G+ V +EY + +SA G GL L+
Sbjct: 318 IDAVPELAARGDAVERDEYGNISRVFLSARTGQGLDTLR 356
>gi|376248725|ref|YP_005140669.1| putative GTP-binding protein [Corynebacterium diphtheriae HC04]
gi|376251524|ref|YP_005138405.1| putative GTP-binding protein [Corynebacterium diphtheriae HC03]
gi|372113028|gb|AEX79087.1| putative GTP-binding protein [Corynebacterium diphtheriae HC03]
gi|372115293|gb|AEX81351.1| putative GTP-binding protein [Corynebacterium diphtheriae HC04]
Length = 536
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 180/355 (50%), Gaps = 36/355 (10%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G + LK ++ V V + L Q L+ V V DR M+++ I
Sbjct: 161 DPGTYIGSGKVSELK-EIVASTGVDTVICDGE-LSPSQMIALEKDLDVKVIDRTMLILDI 218
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGF-------LDSK 242
F HAK++E + Q+++A++ YL TR R A N G +++
Sbjct: 219 FAQHAKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAGGRAGSNGGVGLRGPGETKIEAD 278
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSL 302
R L KL+K + +K RE+ R+++++ P +A+ GYTN GK++LI A+T L
Sbjct: 279 RRRLRSDMAKLRKEIAGMKTAREVKRSQRKQSTIPQIAIAGYTNAGKSSLINAMTGAGVL 338
Query: 303 VPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIH 362
V + LFATLD TT L + +++ DT+GF+ ++PT L+E F+ TLE+ + AD+++H
Sbjct: 339 V-EDALFATLDPTTRRAELADGRAVVFTDTVGFVRHLPTQLVESFRSTLEEVVDADLVLH 397
Query: 363 VVDVSNPDYLQQKQHVDETLQHLELEEKI-LEHVLVVGNKVDAVPPGERVTEEYDL---- 417
VVD S+P L+Q + V+ + + E K+ ++V NK+D P + L
Sbjct: 398 VVDGSDPFPLKQIEAVNTVVSEIVRELKVDAPPEIIVVNKIDQADPLVLAELRHALDDVV 457
Query: 418 LISATRGTGLAQLKEKVQDM---------ILKATGRKNITMRVRSGGS----EYQ 459
+SA G+ +L+ +V+ +L R +I R+ S G+ EY+
Sbjct: 458 FVSAKTAEGIPELEMRVEQFLNTLDTHVRLLVPYTRGDIVSRLHSNGTVLSEEYE 512
>gi|126737691|ref|ZP_01753421.1| GTP-binding protein HflX [Roseobacter sp. SK209-2-6]
gi|126721084|gb|EBA17788.1| GTP-binding protein HflX [Roseobacter sp. SK209-2-6]
Length = 423
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 216/430 (50%), Gaps = 38/430 (8%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ +V+ P IK +RN + LAE AL ++ V+ S ++ L FG G
Sbjct: 9 RAWVLHPEIK-SDFDRRNA--EAALAEGVALAEALPDLDVIGSNVVRLPKAHAGMLFGSG 65
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
+E L +++ + + V + V + QQ+ L+ ++V + DR ++++IF A+TRE
Sbjct: 66 KIEELSTKLKAE-EIELVLIDGPVSPV-QQRNLEKAWKVKILDRTGLILEIFSDRARTRE 123
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKK 255
LQ+ +A L Y R R + T++ +G +++ R + E+ +L++
Sbjct: 124 GVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDEQLVRLRR 181
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L K+ R + R + + +P VA+VGYTN GK+TL LT + ++ ++ LFATLD T
Sbjct: 182 QLEKVAKTRTLHRAARAKVPYPIVALVGYTNAGKSTLFNRLTGAE-VMAKDMLFATLDPT 240
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
LP+ I+ DT+GFIS++PT L+ F+ TLE+ + AD+I+HV D+S+ + +Q
Sbjct: 241 MRRVELPDGPEIILSDTVGFISDLPTELVAAFRATLEEVLAADVILHVRDISHDETAKQA 300
Query: 376 QHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLL-------ISATRGTGLA 428
+ V L+ L +++ + + + NK+D + E + ISA G GL
Sbjct: 301 EDVASILESLGVDDSRAQ--IEIWNKLDQLSEEEAIARRERAEREEDVHAISALTGEGLP 358
Query: 429 QLKEKVQDMILKATG---RKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVV 485
L +QD+ K G + T+ S G + WL V+ E++ E +L V
Sbjct: 359 GL---LQDIATKLQGVLFEEQFTLPY-SDGRKRAWLFAQDVVT---EEEQGEEGFVLTVR 411
Query: 486 MTDVIMNKFK 495
T+ +F+
Sbjct: 412 WTEKQKAQFQ 421
>gi|404378480|ref|ZP_10983571.1| GTP-binding protein HflX [Simonsiella muelleri ATCC 29453]
gi|404295037|gb|EFG31291.2| GTP-binding protein HflX [Simonsiella muelleri ATCC 29453]
Length = 378
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 164/309 (53%), Gaps = 22/309 (7%)
Query: 142 FFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAH 201
F G G E L + V + +F L Q++ L+ Q V DR +++ IF
Sbjct: 72 FVGTGKAEELAKLVEQNQIELVIFN--HELSPTQERNLEKALQCRVLDRVGLILAIFAQR 129
Query: 202 AKTREARLQIAIAELPYLWTR----YRTIEDATNMNITKGF----LDSKRMVLMEREQKL 253
A+++E +LQ+ +A+L +L +R Y+ ++ KG L++ R ++ + L
Sbjct: 130 AQSQEGKLQVELAQLSHLSSRLVRGYKHLQSQKGGIGLKGPGETQLETDRRLIQNKINFL 189
Query: 254 KKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLD 313
KK L+ +K QRE R + T A+VGYTN GK+TL LT D + ++QLFATLD
Sbjct: 190 KKQLDNVKKQRETRRKARLSGSLKTFAIVGYTNAGKSTLFNRLTKAD-VFAQDQLFATLD 248
Query: 314 VTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQ 373
T L I+ DT+GF+ N+P L+ F TLE+ LAD+++HVVD S+P+Y +
Sbjct: 249 TTARRLYLNPETSIILTDTVGFVQNLPHKLVSAFAATLEETALADVLLHVVDASDPEYER 308
Query: 374 QKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER--------VTEEYDLLISATRGT 425
+ Q V+ L+ ++ +KI + LV+ NK D +P E+ V + + +SA G
Sbjct: 309 KIQDVNHVLREIK-ADKIPQ--LVIYNKQDLLPAAEQSSGCLKNYVGKTVAVGVSAVSGM 365
Query: 426 GLAQLKEKV 434
GL L++ +
Sbjct: 366 GLEDLRQAL 374
>gi|416241280|ref|ZP_11632661.1| GTP-binding proten HflX [Moraxella catarrhalis BC7]
gi|326572797|gb|EGE22783.1| GTP-binding proten HflX [Moraxella catarrhalis BC7]
Length = 469
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 161/298 (54%), Gaps = 26/298 (8%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+ L + V DR +++ IF A+T E +LQ+ +A+L +L TR + T++
Sbjct: 98 QERNLESLIKCRVLDRTGLILDIFAQRARTHEGKLQVELAQLNHLATRL--VRGWTHLER 155
Query: 235 TKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGY 284
KG L++ R +L R +LK L+K+K R+ R K+Q+ PT+++VGY
Sbjct: 156 QKGGIGLRGPGETQLETDRRLLQIRVTQLKAKLDKVKQTRKQGRAKRQKSDIPTISLVGY 215
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
TN GK+TL LTDD+ + +QLFATLD T P ++ DT+GF+ ++P L+
Sbjct: 216 TNAGKSTLFNRLTDDN-IYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFVRHLPHELV 274
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA 404
E F TLE+ + AD+++HV+D ++ D Q + V++ L+ ++ + I L+V NK+D
Sbjct: 275 ESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQADAPI----LLVFNKIDK 330
Query: 405 VPPGERVTEEYD-------LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGG 455
GE Y + +SA G+ QL VQ+++ +T+ +G
Sbjct: 331 --SGEPAKIHYQDHGVPHRVYVSAKENLGINQLMLAVQELLSGQLNHYTLTLPHHAGA 386
>gi|163760113|ref|ZP_02167196.1| GTP-binding protein [Hoeflea phototrophica DFL-43]
gi|162282512|gb|EDQ32800.1| GTP-binding protein [Hoeflea phototrophica DFL-43]
Length = 413
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 192/361 (53%), Gaps = 32/361 (8%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAV-FVSVD 169
+ E+ L +I +V ++ I+ + + + FGKG + +V+G T V VD
Sbjct: 1 MEEAVGLAGAID-LQVAEALIVPISAPRPSTLFGKGKM----LEVKGVIETTGSGLVIVD 55
Query: 170 -VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIED 228
L QQ+ ++ ++V V DR ++++IF A TRE LQ+ +A L Y + R +
Sbjct: 56 HPLTPVQQRNMETEWKVKVIDRTGLILEIFGRRASTREGVLQVELAHLNY--QKGRLVRS 113
Query: 229 ATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
T++ +G +++ R +L +R KL++ L +++ R++ R K+++ P
Sbjct: 114 WTHLERQRGGGGFMGGPGETQIEADRRLLQDRIVKLERELEQVRRTRQLHRAKRKKVPHP 173
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
VA+VGYTN GK+TL +T + L + LFATLD T LP+ ++ DT+GFIS
Sbjct: 174 IVALVGYTNAGKSTLFNRVTGAEVLA-EDMLFATLDPTLRRMKLPHGNTVILSDTVGFIS 232
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
++PT L+ F+ TLE+ + AD+I+HV D+++PD Q V+E L+ L L E ++
Sbjct: 233 SLPTHLVAAFRATLEEVVEADLILHVRDMADPDRASQAGDVEEILKSLGLNEGDGRKLVE 292
Query: 398 VGNKVDAVPPGERVTE---------EYDLLISATRGTGLAQLKEKVQDMILKATGRKNIT 448
V NK+D + E E E + +S+ G G+ +L +++ +I +N+T
Sbjct: 293 VWNKIDLL--SEEAAEDLKTRAEKSENAIAVSSVTGEGIDELLMRIETIISGKLVSRNVT 350
Query: 449 M 449
+
Sbjct: 351 L 351
>gi|319783406|ref|YP_004142882.1| GTP-binding proten HflX [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169294|gb|ADV12832.1| GTP-binding proten HflX [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 463
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 165/323 (51%), Gaps = 23/323 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT---RYR 224
QQ+ L+ V DR ++++IF A+T+E LQ+ +A L Y WT R R
Sbjct: 120 QQRNLEKELNAKVLDRTGLILEIFGERARTKEGTLQVELAHLNYQKGRLVRSWTHLERQR 179
Query: 225 TIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGY 284
+ ++S R L E+ KLK+ L ++ R++ R K+++ FP VA+VGY
Sbjct: 180 GGA-GFLGGPGETQIESDRRQLQEKIIKLKQELETVRRTRDLHRAKRRKVPFPVVAIVGY 238
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
TN GK+TL LT D L ++ LFATLD T LP+ I+ DT+GFIS++PT L+
Sbjct: 239 TNAGKSTLFNRLTGADVLA-QDMLFATLDPTLRRVRLPHGTPIILSDTVGFISDLPTHLI 297
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA 404
F+ TLE+ + AD+++H+ D+S+PD Q + V+ L L ++ + V+ V NK+D
Sbjct: 298 AAFRATLEEVVEADLVLHLRDISDPDTAAQAEDVERILADLGVDAGDAKRVIEVWNKIDR 357
Query: 405 VPPGER---------VTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGG 455
+ G R + + +SA G G+ LK ++ + +T+ G
Sbjct: 358 LDEGNRTRLLADGADANKAPPIAVSAVTGEGIDALKAIIETRMAGELEDLTVTIEPAQFG 417
Query: 456 SEYQWLMKHT-AVSNIREDDTSA 477
WL ++ VS DD SA
Sbjct: 418 L-VDWLYRNGDVVSRSDNDDGSA 439
>gi|154498371|ref|ZP_02036749.1| hypothetical protein BACCAP_02360 [Bacteroides capillosus ATCC
29799]
gi|150272682|gb|EDM99860.1| GTP-binding protein HflX [Pseudoflavonifractor capillosus ATCC
29799]
Length = 430
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 204/408 (50%), Gaps = 39/408 (9%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
+AE AL+ + G V + + + D ++F G+G + +K V+ VF +
Sbjct: 34 MAELAALLET-AGGECVGEVLQNKDAPDPRTFIGEGKVREVKELVQSMEADMVVFD--NA 90
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYL-------WTRY 223
L QQ+ L D V V DR +++ IF A+T+E RLQ+ +A+ YL WT
Sbjct: 91 LSPSQQRALTDDLGVSVLDRSALILDIFAQRARTKEGRLQVELAQYKYLLPRLLGMWTHL 150
Query: 224 RTIEDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
E A T+G L++ R + ++ KL++ L +++ R R ++ + + P V
Sbjct: 151 ERQEGAIG---TRGPGETQLETDRRHIRKKISKLEEDLEQVRRVRATQRERRIKNEVPVV 207
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL+ LT D + N+LF TLD TT + + +L DT+GFIS +
Sbjct: 208 AIVGYTNAGKSTLLNKLTGAD-IPANNRLFDTLDTTTRTLEISDTCTVLISDTVGFISKL 266
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV---- 395
P L+E FK TLE+ AD+++HV+D SNP++ +Q V++ + L + V
Sbjct: 267 PHHLVEAFKATLEELSFADLLLHVIDTSNPEWREQAAVVEKLIVELGAAQTPRIDVFNKS 326
Query: 396 -LVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV-RS 453
L VG D VP GE + ISA G GL +L +K+ D + TG + +R+
Sbjct: 327 DLYVG---DIVPHGEDIVS-----ISAKTGAGLDELLKKIGDRL--DTGAHRVVLRIPYD 376
Query: 454 GGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISS 501
G L + V + E + ++ V T + + + K +FI S
Sbjct: 377 QGGVLDMLHREAKVERV----DYGEAIEVEAVCTPIQLGRLK-DFIVS 419
>gi|346224481|ref|ZP_08845623.1| GTP-binding protein HflX [Anaerophaga thermohalophila DSM 12881]
Length = 404
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/360 (32%), Positives = 185/360 (51%), Gaps = 21/360 (5%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V I SL D + + G G LE + V+ V+A+ D L Q
Sbjct: 37 AFLAETAGAVPVRRFIQSLPIHDNRYYVGSGKLEEIIAYVKVHEDVSAIIFD-DELTPSQ 95
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYL-------WTRYRTIED 228
K L+ FQ + DR +++ IF A+T A+ Q+ +A+ YL WT
Sbjct: 96 LKNLEAAFQRRILDRTNLILDIFAKRARTAHAKTQVELAQYQYLLPRLTRMWTHLERQRG 155
Query: 229 ATNM-NITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
M + +++ R ++ ++ +LK L K+ Q+ R K R K VA+VGYTN
Sbjct: 156 GIGMRGPGEKEIETDRRIIRDKIARLKTELQKIDRQKATQR--KNRGKLVRVALVGYTNV 213
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GK+TL+ AL D + N+LFATLD T + ++ N L L DT+GFI +P L+E F
Sbjct: 214 GKSTLMNALAKSD-VFAENKLFATLDTTVRKVVVGN-LPFLLADTVGFIRKLPHHLVESF 271
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP 407
K TL++ ADI++HVVD+S+P + QQ + V++TL ++ EK + ++V NKVDA
Sbjct: 272 KSTLDEVREADILLHVVDISHPGFEQQIEVVNQTLHEIDEREKPM---IMVFNKVDAFTY 328
Query: 408 GERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
++ E D L ATR L + + + KA+ I+ R ++ E++ L+ V
Sbjct: 329 TKK---EDDDLTPATREN--YSLDDMKKSWMAKASKSIFISAREKTNFEEFRELLYREVV 383
>gi|345017496|ref|YP_004819849.1| GTP-binding proten HflX [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032839|gb|AEM78565.1| GTP-binding proten HflX [Thermoanaerobacter wiegelii Rt8.B1]
Length = 413
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 178/343 (51%), Gaps = 22/343 (6%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
+ DK + GKG LE L+ + V V V+ D L Q K ++D V V DR +++
Sbjct: 52 TIDKAHYIGKGKLEELEFFAE-NQEVDLVIVN-DELTGTQIKNMEDFLNVKVIDRTNLIL 109
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLM 247
IF AK++E LQ+ +A+L Y R R + L++ R +
Sbjct: 110 DIFAKRAKSKEGMLQVELAQLKYRLPRLAGLGGQLSRLGGGIGTRGPGETKLETDRRHIK 169
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
R + ++K L +++ R + R ++++ + P +A+VGYTN GK+TL+ ALT+ + V ++
Sbjct: 170 NRIKAIEKKLEEIERHRSLQRERRKKNRIPVIAIVGYTNAGKSTLLNALTNAEVYV-EDK 228
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T +L + ++ +DT+GFI +P L+E FK TLE+ AD+++HV+DV+
Sbjct: 229 LFATLDPTARRLVLSSGREVILIDTVGFIRKLPHDLVEAFKSTLEEVKYADLLLHVIDVA 288
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD---AVPPGERVTEEYDLLISATRG 424
+PD ++ + V++ L L I + V NK+D VP G E ++ ISA
Sbjct: 289 SPDMEEKIKVVEKVLSDL---GAINTPKINVFNKIDLLEVVPKG----NEREVYISAKNK 341
Query: 425 TGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
G +L + ++ I K N + EY +L + T +
Sbjct: 342 IGFDKLLQAIEREIFKDVEVVNFLLPY-DKTKEYNYLKEKTKI 383
>gi|225017068|ref|ZP_03706260.1| hypothetical protein CLOSTMETH_00993 [Clostridium methylpentosum
DSM 5476]
gi|224950235|gb|EEG31444.1| hypothetical protein CLOSTMETH_00993 [Clostridium methylpentosum
DSM 5476]
Length = 439
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 166/317 (52%), Gaps = 17/317 (5%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQ 196
D + G G L+ +K G+ +F D+ L Q + ++ + V DR +++
Sbjct: 76 DSATCIGAGRLDEIKEFCEGNDVDLLIF---DLELTATQTRNIERVTGVRAIDRTTLILD 132
Query: 197 IFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLME 248
IF A++RE ++Q+ +A+ Y R R + L++ + +
Sbjct: 133 IFAQRARSREGQIQVELAQQRYRLPRLAGMGVELSRLGGGIGTRGPGETKLETDKRHIRR 192
Query: 249 REQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQL 308
R L++ L++L+ +REMMR ++++ +VA+VGYTN GK+TL+ ALTD ++ N+L
Sbjct: 193 RIASLEQELSQLEKRREMMRTRRKKDNVTSVAIVGYTNAGKSTLLNALTDA-GVLAENKL 251
Query: 309 FATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSN 368
FATLD T LP+ +L +DT+G IS +P L+E FK TLE+A AD+I+HV DVSN
Sbjct: 252 FATLDPTARALELPDGKSVLLIDTVGLISRLPHHLVEAFKSTLEEAANADLILHVCDVSN 311
Query: 369 PDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLA 428
+ Q + V + L L VL V NK D +P ++E ++ISA G G
Sbjct: 312 DEVESQVKVVHQLLGELGCGSI---PVLTVLNKCDKIPFQPYLSEPDSVMISAKTGFGFD 368
Query: 429 QLKEKVQDMILKATGRK 445
L K+ L+ T R+
Sbjct: 369 NLLHKIASS-LEQTSRR 384
>gi|254369245|ref|ZP_04985257.1| protease [Francisella tularensis subsp. holarctica FSC022]
gi|157122195|gb|EDO66335.1| protease [Francisella tularensis subsp. holarctica FSC022]
Length = 435
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 171/313 (54%), Gaps = 28/313 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F G G +E++K + D + V L Q++ ++ + V DR ++++I
Sbjct: 56 DIKYFCGMGKIEMIKN--KRDELEADLVVFNHPLTPSQERNIEKFLECRVMDRTRLILEI 113
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVL 246
F AKT E +LQ+ +A+L Y TR ++ T++ KG L+ R ++
Sbjct: 114 FSLRAKTYEGKLQVELAQLNYQSTR--LVKGWTHLERQKGGIGVRGGPGETQLEIDRRLI 171
Query: 247 MEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRN 306
+R +++ + L K+K R++ R+ +++ PT++ VGYTN GK+TL +T+ D L ++
Sbjct: 172 RQRIKQIAQKLEKVKHHRDLSRSSRKKNNIPTISFVGYTNAGKSTLFNKITNADVLA-KD 230
Query: 307 QLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
QLFATLD T + ++P I++ DT+GFI N+P L+E F TLE+A+ +D+++HV+D
Sbjct: 231 QLFATLDPTLRKVIVPKLGEIIFSDTVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDY 290
Query: 367 SNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA---VPPGERVTEEYD------L 417
++ D+ + V++ L + + +K + V NK+D + P E+ D +
Sbjct: 291 ADEDHKSYIEQVEKVLSEIGIADK---ETICVYNKIDKLENIKPSFVPLEDSDSSVVSRV 347
Query: 418 LISATRGTGLAQL 430
+SA G GL +
Sbjct: 348 YLSAQNGDGLVEF 360
>gi|225575070|ref|ZP_03783680.1| hypothetical protein RUMHYD_03159 [Blautia hydrogenotrophica DSM
10507]
gi|225037740|gb|EEG47986.1| GTP-binding protein HflX [Blautia hydrogenotrophica DSM 10507]
Length = 411
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 164/310 (52%), Gaps = 19/310 (6%)
Query: 141 SFFGKGNLELLKRQVRG-DARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
++ GKG +E ++ V DA T V D L Q LQ V DR ++++ IF
Sbjct: 57 TYIGKGKIEEVRMLVLAQDA--TGVICD-DELSPAQFHNLQRELDCKVMDRTLLILDIFA 113
Query: 200 AHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQ 251
+HA TRE ++Q+ +A+L Y R R + L+ R ++ R
Sbjct: 114 SHAVTREGKIQVELAQLRYRAARLAGLGSSLSRLGGGIGTRGPGEKKLEMDRRLIRTRIS 173
Query: 252 KLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFAT 311
+LKK L ++ RE++R+++QR A+VGY++ GK++ + LT S++ LF+T
Sbjct: 174 QLKKELEEVVRHRELVRDQRQRMNQKIAALVGYSSAGKSSTMNYLTGA-SILEDEMLFST 232
Query: 312 LDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDY 371
LD TT L + IL DT+GFI +P L+E FK TLE+ ADIIIHVVD SNP
Sbjct: 233 LDTTTRVLQLSGKQEILLTDTVGFIRKLPHQLIEAFKSTLEEVCYADIIIHVVDASNPQR 292
Query: 372 LQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTE---EYDLLISATRGTGLA 428
Q V ETL+ L++ +K V+ + NK D + ++ + EY +L S G G+
Sbjct: 293 ETQMHVVYETLRQLKVSDK---PVITLFNKQDKLEEKQKFRDFRAEYSILSSTKTGEGME 349
Query: 429 QLKEKVQDMI 438
+LK +++++
Sbjct: 350 ELKAALEEIL 359
>gi|110633964|ref|YP_674172.1| HSR1-like GTP-binding protein [Chelativorans sp. BNC1]
gi|110284948|gb|ABG63007.1| GTP-binding protein, HSR1-related protein [Chelativorans sp. BNC1]
Length = 460
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 168/318 (52%), Gaps = 22/318 (6%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
QQ+ L+ + V DR ++++IF A+T+E RLQ+ +A L Y R R + T++
Sbjct: 119 QQRNLERELKAKVLDRTGLILEIFGRRARTKEGRLQVDLAHLEY--QRGRLVRSWTHLER 176
Query: 235 TKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVG 283
+G +++ R +L ER ++K+ L ++ R++ R K+++ FP VA+VG
Sbjct: 177 QRGGGGFMGGPGETQIEADRRLLQERIIRIKRELETVRRTRDLHRTKRRKVPFPIVAIVG 236
Query: 284 YTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTL 343
YTN GK+TL LT S++ + LFATLD T P+ ++ DT+GFIS++P L
Sbjct: 237 YTNAGKSTLFNRLTGA-SVLAEDMLFATLDPTLRRVRFPHGTVVILSDTVGFISDLPPHL 295
Query: 344 LEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+ F+ TLE+ + AD+I+H+ D+S+PD + V++ L L ++ + V NK+D
Sbjct: 296 VAAFRATLEEVVEADVILHLRDISDPDTAAHARDVEQVLASLGVDTSDPARAVEVWNKID 355
Query: 404 AVPPGER-------VTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGS 456
+ +R + + + ISA G G+ L V++ + T+ G
Sbjct: 356 RLSEADRERLLRDDINKTAPIAISAITGEGIEDLMALVEERLSGEVSEVLFTLSSEQMGL 415
Query: 457 EYQWLMKHTAVSNIREDD 474
W+ +H V+N ++++
Sbjct: 416 -MDWIYRHARVTNRKDNE 432
>gi|167627766|ref|YP_001678266.1| protease, GTP-binding subunit [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597767|gb|ABZ87765.1| protease, GTP-binding subunit [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 435
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 165/296 (55%), Gaps = 24/296 (8%)
Query: 126 VVDSTIISLLSF-----DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQ 180
D ++ L F D K F G G +E++K + D + V L Q++ ++
Sbjct: 39 AADKVVLESLDFNHPEPDIKYFCGMGKMEMIKN--KRDELEADLVVFNHPLSPSQERNIE 96
Query: 181 DLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-- 238
+ + DR ++++IF AKT E +LQ+ +A+L Y TR ++ T++ KG
Sbjct: 97 KFLECKIMDRTRLILEIFSLRAKTHEGKLQVELAQLNYQSTR--LVKGWTHLERQKGGIG 154
Query: 239 ---------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGK 289
L+ R ++ +R +++ + L K+K R++ R+ +++ PT++ VGYTN GK
Sbjct: 155 VRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNNIPTISFVGYTNAGK 214
Query: 290 TTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKV 349
+TL +T+ D L ++QLFATLD T + ++P +++ DT+GFI N+P L+E F
Sbjct: 215 STLFNKITNADVLA-KDQLFATLDPTLRKVIVPKLGEVIFSDTVGFIKNLPHDLVEAFHA 273
Query: 350 TLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV 405
TLE+A+ +D+++HV+D ++ DY V++ L+ + + +K ++ V NK+D +
Sbjct: 274 TLEEAIESDLLVHVIDYADEDYKSYIGQVEKVLKEIGIADK---EMICVYNKIDKI 326
>gi|416217283|ref|ZP_11624232.1| GTP-binding proten HflX [Moraxella catarrhalis 7169]
gi|416233349|ref|ZP_11629269.1| GTP-binding proten HflX [Moraxella catarrhalis 12P80B1]
gi|416238660|ref|ZP_11631540.1| GTP-binding proten HflX [Moraxella catarrhalis BC1]
gi|421779722|ref|ZP_16216214.1| GTP-binding proten HflX [Moraxella catarrhalis RH4]
gi|326561134|gb|EGE11499.1| GTP-binding proten HflX [Moraxella catarrhalis 7169]
gi|326566655|gb|EGE16796.1| GTP-binding proten HflX [Moraxella catarrhalis 12P80B1]
gi|326567977|gb|EGE18074.1| GTP-binding proten HflX [Moraxella catarrhalis BC1]
gi|407813432|gb|EKF84214.1| GTP-binding proten HflX [Moraxella catarrhalis RH4]
Length = 469
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 161/298 (54%), Gaps = 26/298 (8%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+ L + V DR +++ IF A+T E +LQ+ +A+L +L TR + T++
Sbjct: 98 QERNLESLIKCRVLDRTGLILDIFAQRARTHEGKLQVELAQLNHLATRL--VRGWTHLER 155
Query: 235 TKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGY 284
KG L++ R +L R +LK L+K+K R+ R K+Q+ PT+++VGY
Sbjct: 156 QKGGIGLRGPGETQLETDRRLLQIRVTQLKAKLDKVKQTRKQGRAKRQKSDIPTISLVGY 215
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
TN GK+TL LTDD+ + +QLFATLD T P ++ DT+GF+ ++P L+
Sbjct: 216 TNAGKSTLFNRLTDDN-IYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFVRHLPHELV 274
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA 404
E F TLE+ + AD+++HV+D ++ D Q + V++ L+ ++ + I L+V NK+D
Sbjct: 275 ESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQADAPI----LLVFNKIDK 330
Query: 405 VPPGERVTEEYD-------LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGG 455
GE Y + +SA G+ QL VQ+++ +T+ +G
Sbjct: 331 --SGEPAKIHYQDHGVPHRVYVSAKENLGINQLMLAVQELLSGQLNHYTLTLPHHAGA 386
>gi|414173418|ref|ZP_11428181.1| GTP-binding protein HflX [Afipia broomeae ATCC 49717]
gi|410892070|gb|EKS39866.1| GTP-binding protein HflX [Afipia broomeae ATCC 49717]
Length = 458
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 213/443 (48%), Gaps = 36/443 (8%)
Query: 81 ALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGW-RVVDSTII-----SL 134
A G +V V+ P+ + + TT + +A + G R +D T+ L
Sbjct: 16 ARGDTGRVLVIGPYKRVRRGDPDATTVAHGVRNPEARLEEAAGLARAIDLTVAEVVLAPL 75
Query: 135 LSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIV 194
++ GKG +E + ++ + +V V + L QQ+ L+ + V DR ++
Sbjct: 76 SEIRPATYLGKGKVEEMIGLIKAN-QVDLVVMDC-ALSPVQQRNLEKEWNAKVLDRTGLI 133
Query: 195 IQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKR 243
++IF AKTRE LQ+ +A L Y R R + T++ +G +++ R
Sbjct: 134 LEIFGRRAKTREGTLQVELAHLNY--QRSRLVRSWTHLERQRGGFGFMGGPGETQIEADR 191
Query: 244 MVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLV 303
++ +R K++ L K++ R + R +QR + VA+VGYTN GK+TL LT D +
Sbjct: 192 RLIGDRISKIESELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRAD-VQ 250
Query: 304 PRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHV 363
+ LFATLD T LP+ + + DT+GFIS++PT L+ F+ TLE+ + AD+I+HV
Sbjct: 251 AADMLFATLDPTLRALTLPHGGKAMLSDTVGFISDLPTMLVAAFRATLEEVIEADVILHV 310
Query: 364 VDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP----------PGERVTE 413
D+S+ D Q+ V+ L+ L ++ + +L V NK+D R E
Sbjct: 311 RDISHEDADAQQHDVEGVLRQLGIDPDSGQRILEVWNKIDRFDEEGRANLMNIAARRSPE 370
Query: 414 EYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV-RSGGSEYQWLMKHTAVSNIR- 471
+SA G G+ L ++D + A R + + + S G+ WL ++ V +
Sbjct: 371 RPCFPVSAVTGEGIDALLAAIEDRL--AATRVTLDLSIDASDGAGISWLHRNAEVLDKHM 428
Query: 472 EDDTSAEHLLLDVVMTDVIMNKF 494
E+ A + +D D+ + KF
Sbjct: 429 ENGRFAMTVRVDETKRDITIAKF 451
>gi|254373007|ref|ZP_04988496.1| hypothetical protein FTCG_00580 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570734|gb|EDN36388.1| hypothetical protein FTCG_00580 [Francisella novicida GA99-3549]
Length = 435
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 171/313 (54%), Gaps = 28/313 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F G G +E++K + D + V L Q++ ++ + V DR ++++I
Sbjct: 56 DIKYFCGMGKIEMIKN--KRDELEADLVVFNHPLTPSQERNIEKFLECRVMDRTRLILEI 113
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVL 246
F AKT E +LQ+ +A+L Y TR I+ T++ KG L+ R ++
Sbjct: 114 FSLRAKTYEGKLQVELAQLNYQSTR--LIKGWTHLERQKGGIGVRGGPGETQLEIDRRLI 171
Query: 247 MEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRN 306
+R +++ + L K+K R++ R+ +++ PT++ VGYTN GK+TL +T+ D L ++
Sbjct: 172 RQRIKQITQKLEKVKHHRDLSRSSRKKNNIPTISFVGYTNAGKSTLFNKITNADVLA-KD 230
Query: 307 QLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
QLFATLD T + ++P +++ DT+GFI N+P L+E F TLE+A+ +D+++HV+D
Sbjct: 231 QLFATLDPTLRKVIVPKLGEVIFSDTVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDY 290
Query: 367 SNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA---VPPGERVTEEYD------L 417
++ D+ + V++ L + + +K + V NK+D + P E+ D +
Sbjct: 291 ADEDHKSYIEQVEKVLSEIGIADK---ETICVYNKIDKLENIKPSFVPLEDSDSSVVARV 347
Query: 418 LISATRGTGLAQL 430
+SA G GL +
Sbjct: 348 YLSAQNGDGLVEF 360
>gi|83593020|ref|YP_426772.1| small GTP-binding protein domain-containing protein [Rhodospirillum
rubrum ATCC 11170]
gi|83575934|gb|ABC22485.1| Small GTP-binding protein domain [Rhodospirillum rubrum ATCC 11170]
Length = 418
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 210/418 (50%), Gaps = 28/418 (6%)
Query: 90 VVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLE 149
++ PF++ G+ R+ + LAE+ L +I V S + + ++ G G +E
Sbjct: 1 MLHPFLRKGRPAARSP--EARLAEANGLAEAIS-LDVALSETVPMARVVPATYIGGGAVE 57
Query: 150 LLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARL 209
+ + +A ++ V V + + QQ+ L+ + V DR ++++IF A+T E ++
Sbjct: 58 RMAGIIAAEA-ISLVVVDTQLSPI-QQRNLERAWACKVIDRTGLILEIFGERARTAEGQM 115
Query: 210 QIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKKALN 258
Q+ +A L Y R R + T++ +G ++ R ++ +R +L+K L
Sbjct: 116 QVELAHLTY--QRSRLVRSWTHLERQRGGVGFLGGPGETQIELDRRLIGDRITRLRKDLE 173
Query: 259 KLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHE 318
+++ R + R + R +P VA+VGYTN GK+TL LT L ++ LFATLD T
Sbjct: 174 EVRRTRGLHREARARVPYPVVALVGYTNSGKSTLFNRLTAGGVLA-KDMLFATLDPTMRS 232
Query: 319 GMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHV 378
LP+ +++ DT+GF+S++P L+ F+ TLE+ AD+I+HV D++ D QK V
Sbjct: 233 LDLPSGRKVILSDTVGFVSDLPHELVAAFRATLEEVKAADVIVHVRDIAGIDSDAQKADV 292
Query: 379 DETLQHLELEEKILEHVLVVGNKVDAVPPGERV-----TEEYDLL--ISATRGTGLAQLK 431
+ L+ +EL+E++ ++ NK+D + + T D L +SA G G L
Sbjct: 293 EVVLREMELDERVESGLIEALNKIDLLDSERQAQLVEDTAGRDTLVPVSAVTGAGTDALL 352
Query: 432 EKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDV 489
++ + ++ +++ + S G+ W+ + V R DD HL + + D+
Sbjct: 353 ARIDARLAESRIVLGLSIPL-SDGATLAWVYRKGEVLE-RHDDEEQAHLTVRLDPADI 408
>gi|158313083|ref|YP_001505591.1| small GTP-binding protein [Frankia sp. EAN1pec]
gi|158108488|gb|ABW10685.1| small GTP-binding protein [Frankia sp. EAN1pec]
Length = 503
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 158/318 (49%), Gaps = 23/318 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D +F G G + L V T + L Q + L+++ +V V DR +++ I
Sbjct: 135 DAATFVGSGKAKELAEIVLATGADT--VICDGELTPGQLRQLEEVVKVKVIDRTALILDI 192
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-------------LDSKRM 244
F HA +RE + Q+ +A+L Y+ R R ++ + G +++ R
Sbjct: 193 FAQHATSREGKAQVELAQLQYMLPRLRGWGESMSRQAASGGRAPIGTRGPGETKIETDRR 252
Query: 245 VLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVP 304
L R KL++ L + R R+ ++R P VA+ GYTN GK++L+ LT LV
Sbjct: 253 RLRARITKLRRELTGMATVRATKRSSRRRGAVPAVAIAGYTNAGKSSLLNRLTGAGVLV- 311
Query: 305 RNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
+ LFATLD T LP+ DT+GF+ ++P ++E F+ TLE+ + AD+++HVV
Sbjct: 312 EDALFATLDPTVRRATLPDGRIFTLADTVGFVRHLPHQIVEAFRSTLEEVVDADLVLHVV 371
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE----RVTEEYDLLIS 420
D S PD + Q V E L E++ + ++VV NKVDAV P R + +S
Sbjct: 372 DGSAPDPMGQISAVREVLA--EIDAAGVPELIVV-NKVDAVDPTTLAVLRQAVPDAIFVS 428
Query: 421 ATRGTGLAQLKEKVQDMI 438
A G GL +L E + I
Sbjct: 429 ARSGAGLQELVEALSARI 446
>gi|374291860|ref|YP_005038895.1| putative GTP-binding protein (HflX-like) [Azospirillum lipoferum
4B]
gi|357423799|emb|CBS86659.1| Putative GTP-binding protein (HflX-like) [Azospirillum lipoferum
4B]
Length = 409
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 197/394 (50%), Gaps = 30/394 (7%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD- 169
L E+ L +IQ V+ + + + G G +E L V + A V +D
Sbjct: 8 LEEAIGLAQAIQ-LDVIHAECAKVNRPQPSTLLGSGTVEHLAEVVEEN---EATLVILDH 63
Query: 170 VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA 229
L QQ+ L+ + V DR ++++IF A A+TRE LQ+ +A L Y + R +
Sbjct: 64 ALSPVQQRNLERALKAKVIDRTGLILEIFGARARTREGMLQVELASLTY--QKSRLVRSW 121
Query: 230 TNMN-----------ITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
T++ + L+ R ++ +R K+KK L +++ R + R + + +P
Sbjct: 122 THLERQRGGFGFLGGPGESQLELDRRLIGDRIIKIKKELEEVRRTRGLHRKARAKVPYPV 181
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+VGYTN GK+TL L + D + +N LFATLD T + LP+ +++ DT+GFIS+
Sbjct: 182 VALVGYTNAGKSTLFNRLANAD-VFAQNLLFATLDPTMRQVTLPSGRKVILSDTVGFISD 240
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+P L+ F+ TLE+ ADII+HV D+++ D QK V E L + ++ + + V+ V
Sbjct: 241 LPHGLVAAFRATLEEVDAADIILHVRDIAHIDSDAQKADVHEVLSDMGIDPETDDRVIEV 300
Query: 399 GNKVDAVPPGERVT-------EEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
NK+DA+ R + +SA G G+ L +++ D + R+ + + V
Sbjct: 301 LNKIDALDGESRAAILAQTGRNPRAVAVSALSGEGIDDL-DRLLDQRMN-VNRQVVDLSV 358
Query: 452 RSG-GSEYQWLMKHTAVSNIREDDTSAE-HLLLD 483
G G+ WL V R+D+ A H+ LD
Sbjct: 359 ELGDGAALAWLYAKGEVLERRDDEERAHLHVSLD 392
>gi|156502317|ref|YP_001428382.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|156252920|gb|ABU61426.1| putative GTPase [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 403
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 171/313 (54%), Gaps = 28/313 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F G G +E++K + D + V L Q++ ++ + V DR ++++I
Sbjct: 24 DIKYFCGMGKIEMIKN--KRDELEADLVVFNHPLTPSQERNIEKFLECRVMDRTRLILEI 81
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVL 246
F AKT E +LQ+ +A+L Y TR ++ T++ KG L+ R ++
Sbjct: 82 FSLRAKTYEGKLQVELAQLNYQSTR--LVKGWTHLERQKGGIGVRGGPGETQLEIDRRLI 139
Query: 247 MEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRN 306
+R +++ + L K+K R++ R+ +++ PT++ VGYTN GK+TL +T+ D L ++
Sbjct: 140 RQRIKQIAQKLEKVKHHRDLSRSSRKKNNIPTISFVGYTNAGKSTLFNKITNADVLA-KD 198
Query: 307 QLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
QLFATLD T + ++P I++ DT+GFI N+P L+E F TLE+A+ +D+++HV+D
Sbjct: 199 QLFATLDPTLRKVIVPKLGEIIFSDTVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDY 258
Query: 367 SNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA---VPPGERVTEEYD------L 417
++ D+ + V++ L + + +K + V NK+D + P E+ D +
Sbjct: 259 ADEDHKSYIEQVEKVLSEIGIADK---ETICVYNKIDKLENIKPSFVPLEDSDSSVVSRV 315
Query: 418 LISATRGTGLAQL 430
+SA G GL +
Sbjct: 316 YLSAQNGDGLVEF 328
>gi|146305671|ref|YP_001186136.1| HSR1-like GTP-binding protein [Pseudomonas mendocina ymp]
gi|421505259|ref|ZP_15952197.1| GTP-binding protein HflX [Pseudomonas mendocina DLHK]
gi|145573872|gb|ABP83404.1| GTP-binding protein HflX [Pseudomonas mendocina ymp]
gi|400343668|gb|EJO92040.1| GTP-binding protein HflX [Pseudomonas mendocina DLHK]
Length = 433
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 171/317 (53%), Gaps = 28/317 (8%)
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
K G G +E L+ QVR +F L Q++ L+ F+ V DR +++ IF
Sbjct: 56 KYLIGSGKVEELRDQVRAIEAELVIFNHT--LTPSQERNLERAFECRVLDRTGLILDIFA 113
Query: 200 AHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLMER 249
A+T E +LQ+ +A+L ++ TR + T++ KG L++ R +L R
Sbjct: 114 QRARTHEGKLQVELAQLDHMSTRL--VRGWTHLERQKGGIGLRGPGETQLETDRRLLRVR 171
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
+++K+ L K++ QRE R ++R P+V++VGYTN GK+TL ALT + + +QLF
Sbjct: 172 IRQIKQKLEKVRSQREQARRGRKRADIPSVSLVGYTNAGKSTLFNALTASE-VYAADQLF 230
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T L + I+ DT+GFI ++P L+E F+ TLE++ +D+++HV+D P
Sbjct: 231 ATLDPTLRRLELDDLGPIVLADTVGFIRHLPHKLVEAFRATLEESSNSDLLLHVIDAHEP 290
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD---AVPPGERVTEEYD-----LLISA 421
+ + Q + V L+ + E + L V NK+D V P ++ + D + +SA
Sbjct: 291 ERMAQIEQVQAVLKEIGAHELPM---LEVYNKLDLLEGVEP--QIQRDADGKPQRVWLSA 345
Query: 422 TRGTGLAQLKEKVQDMI 438
G GL L++ V +++
Sbjct: 346 REGRGLELLRQAVAELL 362
>gi|389577567|ref|ZP_10167595.1| GTP-binding protein HflX [Eubacterium cellulosolvens 6]
gi|389313052|gb|EIM57985.1| GTP-binding protein HflX [Eubacterium cellulosolvens 6]
Length = 411
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 171/339 (50%), Gaps = 23/339 (6%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQV---RGDARVTAVFVSVDVLK 172
A ++ G VV + I + D ++ G G +E ++ V D + D L
Sbjct: 32 AALAETAGACVVGTAIQNRDYPDPGTYMGSGKIEEIREMVIMLDADG-----VICDDELS 86
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------R 224
Q L++ V DR ++++ IF A+T E ++Q+ +A+L Y R
Sbjct: 87 PAQMNNLENALDCRVADRTLLILDIFAGRAQTSEGKIQVELAQLKYRQAHLVGMRNYLSR 146
Query: 225 TIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGY 284
+ L+ R ++ +R L + L +++ RE++R +++ VA+VGY
Sbjct: 147 LGGGIGTRGPGEKKLEIDRRLIADRIGALGRELKEVRKHREVLRAARKKGNIRQVAIVGY 206
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
TN GK+TL+ +T+ ++ + LFATLD TT LP ++L DT+GFI +P L+
Sbjct: 207 TNAGKSTLLNTMTNA-GVLEEDALFATLDPTTRILDLPGGSQVLLTDTVGFIDKLPHALI 265
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA 404
+ F+ TLE+A AD IIHV D SNP QQ + V ETL L ++K ++ + NK D
Sbjct: 266 DAFRSTLEEAAYADYIIHVADASNPRVEQQMEVVYETLHELGADDK---KIVTLFNKQDK 322
Query: 405 VPPGERVTE---EYDLLISATRGTGLAQLKEKVQDMILK 440
R+ + +Y L +SA GTGL L+ ++ +IL+
Sbjct: 323 TDGSVRLHDHRADYVLSVSAKEGTGLEDLRNVLEKIILE 361
>gi|206901501|ref|YP_002250803.1| GTPase [Dictyoglomus thermophilum H-6-12]
gi|206740604|gb|ACI19662.1| GTPase [Dictyoglomus thermophilum H-6-12]
Length = 405
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 170/326 (52%), Gaps = 22/326 (6%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D SF G LE LK V + R V S D+ + Q + L+ + DR M+++ I
Sbjct: 43 DPASFLRSGKLEELKYLV-IEERADLVIFSNDLTPV-QLRNLEKEIPTKIIDRTMLILDI 100
Query: 198 FKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMER 249
F HA+T+E ++Q+ +A+L YL R R + L+ R + R
Sbjct: 101 FAQHARTKEGKIQVELAQLEYLLPRLVGRGEALSRLGGGIGTRGPGETKLEIDRRKIRRR 160
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
LK+ L +K +RE+ R K+R P VA+VGYTN GK+TL LT + LV + LF
Sbjct: 161 IYALKRELEDIKKEREIQR--KKRLNLPQVALVGYTNAGKSTLFNLLTGANVLV-EDLLF 217
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T + N +L DT+GFI N+P LL F+ TLE+ D+I+HV+DVS+
Sbjct: 218 ATLDPTVRKINFRNNWEVLISDTVGFIRNLPEELLTAFRATLEEIYYVDLILHVIDVSDK 277
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE--RVTEEYD----LLISATR 423
++ +Q + V+ L+ + +EEK ++ V NK+D + E + +E D + ISA
Sbjct: 278 NFRKQIEVVESVLEEMGIEEK---PIIRVYNKIDLLTKEEIRYLRQELDYRPSVFISAKE 334
Query: 424 GTGLAQLKEKVQDMILKATGRKNITM 449
G+ +LK+ + +LK R I +
Sbjct: 335 RIGIERLKDLIVSELLKGVRRYKINI 360
>gi|392941156|ref|ZP_10306800.1| LOW QUALITY PROTEIN: GTP-binding protein HflX [Thermoanaerobacter
siderophilus SR4]
gi|392292906|gb|EIW01350.1| LOW QUALITY PROTEIN: GTP-binding protein HflX [Thermoanaerobacter
siderophilus SR4]
Length = 413
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 177/343 (51%), Gaps = 22/343 (6%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
+ DK + GKG LE LK + V V V+ D L Q K ++D V V DR +++
Sbjct: 52 TIDKAHYIGKGKLEELKFFAE-NQEVDLVIVN-DELTGTQIKNMEDFLNVKVIDRTNLIL 109
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLM 247
IF AK++E LQ+ +A+L Y R R + L++ R +
Sbjct: 110 DIFAKRAKSKEGMLQVELAQLKYRLPRLAGLGGQLSRLGGGIGTRGPGETKLETDRRHIK 169
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
R + ++K L +++ R + R ++++ + P +A+VGYTN GK+TL+ ALT+ + V ++
Sbjct: 170 NRIKAIEKKLEEIERHRSLQRERRKKNRIPVIAIVGYTNAGKSTLLNALTNAEVYV-EDK 228
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T +L + ++ +DT+GFI +P L+E FK TLE+ AD+++HV+DV+
Sbjct: 229 LFATLDPTARRLVLSSGREVILIDTVGFIRKLPHDLVEAFKSTLEEVKYADLLLHVIDVT 288
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD---AVPPGERVTEEYDLLISATRG 424
PD ++ + V++ L L I + V NK+D VP G E ++ ISA
Sbjct: 289 LPDMEEKIKVVEKVLSDL---GAINTPKINVFNKIDLLEVVPKG----NEREVYISAKNK 341
Query: 425 TGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
G +L + ++ I K N + EY +L + T +
Sbjct: 342 IGFDKLLQAIEREIFKDVEVVNFLLPY-DKTKEYNYLKEKTKI 383
>gi|315658402|ref|ZP_07911274.1| GTP-binding protein HflX [Staphylococcus lugdunensis M23590]
gi|315496731|gb|EFU85054.1| GTP-binding protein HflX [Staphylococcus lugdunensis M23590]
Length = 415
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 161/307 (52%), Gaps = 15/307 (4%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D + E +AL + Q VV + D K + GKG ++ +K + D V V+
Sbjct: 35 DSTMQELQALSQTCQ-LEVVSQITQNRQQVDHKYYVGKGKIDEIKAFI--DLHDIDVVVA 91
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY---- 223
D L Q K L D V + DR ++++IF AK++E +LQ+ +A+L YL R
Sbjct: 92 NDELTTAQSKSLNDALDVKIIDRTQLILEIFALRAKSKEGKLQVELAQLDYLLPRLQGHG 151
Query: 224 ----RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
R + L+ R + R ++K L + RE RNK+++ + +
Sbjct: 152 KSLSRLGGGIGTRGPGETKLEMDRRHIRTRINEIKHQLQTIVEHRERYRNKREQNQVFQI 211
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK++ L+ + S +N LFATLD T + L ++ DT+GFI +
Sbjct: 212 ALVGYTNAGKSSWFNVLSGE-STYEQNLLFATLDPKTRQIQLNEGFNVIITDTVGFIQKL 270
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PTTL+ FK TLE+A ADI++H+VD S+P++ Q + V++ +Q LE+++ + V V+
Sbjct: 271 PTTLVAAFKSTLEEAKNADILLHIVDASHPEFRSQYETVNQLIQELEMDQ--IPQV-VLF 327
Query: 400 NKVDAVP 406
NK D P
Sbjct: 328 NKRDLCP 334
>gi|409397114|ref|ZP_11248052.1| GTP-binding protein HflX [Pseudomonas sp. Chol1]
gi|409118274|gb|EKM94674.1| GTP-binding protein HflX [Pseudomonas sp. Chol1]
Length = 433
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 173/317 (54%), Gaps = 28/317 (8%)
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
K G G +E L+ V + V V + L Q++ L+ + + V DR +++ IF
Sbjct: 56 KFLIGTGKVEELRDLVH-EGEVELVIFN-HTLTPSQERNLERVLECRVLDRTGLILDIFA 113
Query: 200 AHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLMER 249
A+T E +LQ+ +A+L ++ TR + T++ KG L++ R +L R
Sbjct: 114 QRARTHEGKLQVELAQLEHMSTRL--VRGWTHLERQKGGIGLRGPGETQLETDRRLLRVR 171
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
+++K+ L K++GQRE R ++R P+V++VGYTN GK+TL LT+ D + NQLF
Sbjct: 172 IRQIKQRLEKVRGQREQARRGRKRADIPSVSLVGYTNAGKSTLFNTLTEAD-VYAANQLF 230
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T LP+ ++ DT+GFI ++P L+E F+ TLE++ AD+++HV+D P
Sbjct: 231 ATLDPTLRRLELPDIGPVVLADTVGFIRHLPHKLVESFRATLEESSNADLLLHVIDAHEP 290
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD---AVPPGERVTEEYD-----LLISA 421
+ QQ + V L + +E VL V NKVD + P ++ + D + +SA
Sbjct: 291 ERDQQIEQVLAVLAEIGADEL---PVLEVYNKVDLMEGIEP--QIQRDADGKPERVWVSA 345
Query: 422 TRGTGLAQLKEKVQDMI 438
G GL L++ + +++
Sbjct: 346 RDGLGLDLLRQAIAELL 362
>gi|296117721|ref|ZP_06836305.1| GTP-binding protein [Corynebacterium ammoniagenes DSM 20306]
gi|295969452|gb|EFG82693.1| GTP-binding protein [Corynebacterium ammoniagenes DSM 20306]
Length = 525
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 167/323 (51%), Gaps = 31/323 (9%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D +F G G ++ LK+ + T + L Q L+ V DR M+V+ I
Sbjct: 126 DAGTFIGSGKVKELKQIIESTGADTVICDGE--LTPGQLNALERELNTKVIDRTMLVLDI 183
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------------LD 240
F HAK++E + Q+A+A+L YL+T R N++ G ++
Sbjct: 184 FAQHAKSKEGKAQVALAQLEYLYTHTRGW--GGNLSRQAGGRAGSNGGVGLRGPGETKIE 241
Query: 241 SKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDD 300
S R + +L+K L ++ R++ R +QR P +A+ GYTN GK++LI ALT
Sbjct: 242 SDRRRIRSEMSRLRKELKGMQTARDVKRAGRQRSTVPQIAIAGYTNAGKSSLINALTGAG 301
Query: 301 SLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADII 360
LV + LFATLD TT + L + ++ DT+GF+ ++PT L+E FK TLE+ AD++
Sbjct: 302 VLV-EDALFATLDPTTRKAELGDGRHVVLTDTVGFVRHLPTQLVEAFKSTLEEVFNADLM 360
Query: 361 IHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVVGNKVDAVPP------GERVT 412
+HVVD ++P L+Q + V++ + + E E ++VV NK+DA +
Sbjct: 361 LHVVDGADPFPLKQIEAVNKVIYDIAKETGETPPPEIIVV-NKIDAADDLALAEIRHVLD 419
Query: 413 EEYDLLISATRGTGLAQLKEKVQ 435
E + +SA G G+++L +++
Sbjct: 420 RENVVYVSAATGEGISELTTRIE 442
>gi|422938675|ref|YP_007011822.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica FSC200]
gi|407293826|gb|AFT92732.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica FSC200]
Length = 436
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 171/313 (54%), Gaps = 28/313 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F G G +E++K + D + V L Q++ ++ + V DR ++++I
Sbjct: 57 DIKYFCGMGKIEMIKN--KRDELEADLVVFNHPLTPSQERNIEKFLECRVMDRTRLILEI 114
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVL 246
F AKT E +LQ+ +A+L Y TR ++ T++ KG L+ R ++
Sbjct: 115 FSLRAKTYEGKLQVELAQLNYQSTR--LVKGWTHLERQKGGIGVRGGPGETQLEIDRRLI 172
Query: 247 MEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRN 306
+R +++ + L K+K R++ R+ +++ PT++ VGYTN GK+TL +T+ D L ++
Sbjct: 173 RQRIKQIAQKLEKVKHHRDLSRSSRKKNNIPTISFVGYTNAGKSTLFNKITNADVLA-KD 231
Query: 307 QLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
QLFATLD T + ++P I++ DT+GFI N+P L+E F TLE+A+ +D+++HV+D
Sbjct: 232 QLFATLDPTLRKVIVPKLGEIIFSDTVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDY 291
Query: 367 SNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA---VPPGERVTEEYD------L 417
++ D+ + V++ L + + +K + V NK+D + P E+ D +
Sbjct: 292 ADEDHKSYIEQVEKVLSEIGIADK---ETICVYNKIDKLENIKPSFVPLEDSDSSVVSRV 348
Query: 418 LISATRGTGLAQL 430
+SA G GL +
Sbjct: 349 YLSAQNGDGLVEF 361
>gi|354582787|ref|ZP_09001688.1| GTP-binding proten HflX [Paenibacillus lactis 154]
gi|353199079|gb|EHB64545.1| GTP-binding proten HflX [Paenibacillus lactis 154]
Length = 428
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 173/332 (52%), Gaps = 35/332 (10%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F GKG +E L+ V G TA+F L Q + L++ V + DR +++ I
Sbjct: 63 DSKWFIGKGKVEELRMAVDGLGATTAIFDQE--LSGAQVRNLEEALDVKIIDRTQLILDI 120
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMN------ITKGF----LDSKRMVLM 247
F AKTRE +Q+ +A+L YL R N++ T+G L++ R +
Sbjct: 121 FAQRAKTREGIIQVELAQLTYLLPRLSG--HGKNLSRLGAGIGTRGPGETKLETDRRHIR 178
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
+R LK+ L+++ R + R ++++ VA+VGYTN GK+TL+ LT+ D + NQ
Sbjct: 179 DRISDLKRQLDEVTRHRNLHRERRKKSGAVQVALVGYTNAGKSTLLNRLTNADVYI-ENQ 237
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T+ LP+ ++ DT+GFI N+P L+ F+ TLE+A AD+I+HVVD S
Sbjct: 238 LFATLDPTSRVLELPSGKEVVLTDTVGFIQNLPHDLVAAFRATLEEANEADLILHVVDAS 297
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLL--------I 419
+ +Q V L+ L +K +V+ NK DA P E+ ++L I
Sbjct: 298 STMREEQMAVVQSILEDLGAADK---PQIVLFNKKDACQP-----EQLEMLPSGDGYLKI 349
Query: 420 SATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
SA L ++E +Q+ + N+T R+
Sbjct: 350 SAYDDEDLTSVRETIQERLSGG----NVTFRI 377
>gi|451940610|ref|YP_007461248.1| GTP-binding protein HflX [Bartonella australis Aust/NH1]
gi|451899997|gb|AGF74460.1| GTP-binding protein HflX [Bartonella australis Aust/NH1]
Length = 447
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 180/345 (52%), Gaps = 25/345 (7%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E+ L +I+ VV II++ + +FFG G ++ + R+ V L
Sbjct: 48 EAVGLACAIK-LNVVHHEIINITTPRPLTFFGAGKVDTFADYI-SKHRIALAIVD-HCLT 104
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
QQ L+ + V DR +++++IF A+T+E LQ+ +A L Y + R + T++
Sbjct: 105 PVQQHNLEKSWNCKVIDRTVLILEIFGDRARTKEGVLQVELAHLSY--QKSRLVRSWTHL 162
Query: 233 NITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
+G +++ R +L ++ ++++ L+ + R + R K+++ P VA+
Sbjct: 163 ERQRGGRGFLGGPGETQIEADRRLLQDKITRIRRELDTIVKTRSLHRAKRKKTPHPVVAL 222
Query: 282 VGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPT 341
VGYTN GK+TL L+ + L +N LFATLD T + +LP+ IL DT+GFIS++PT
Sbjct: 223 VGYTNAGKSTLFNYLSGANVLT-KNMLFATLDPTLRKIILPHGQTILLSDTVGFISDLPT 281
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
L+ F+ TLE+ + AD+I+HV D+S+PD+ Q V E L L ++ + +L V NK
Sbjct: 282 HLIAAFRATLEEVVEADLILHVRDMSDPDHRAHSQDVLEILSSLGVDIGDTDRILEVWNK 341
Query: 402 VD--------AVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMI 438
+D + + + L+ SA G GL QL V+ I
Sbjct: 342 IDILDKHTLSVLRTSAKTSLNPVLMASALTGEGLKQLLMAVEARI 386
>gi|89256256|ref|YP_513618.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica LVS]
gi|115314713|ref|YP_763436.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica OSU18]
gi|290953596|ref|ZP_06558217.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica URFT1]
gi|423050604|ref|YP_007009038.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica F92]
gi|89144087|emb|CAJ79338.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica LVS]
gi|115129612|gb|ABI82799.1| GTP-binding protein HflX [Francisella tularensis subsp. holarctica
OSU18]
gi|421951326|gb|AFX70575.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica F92]
Length = 435
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 171/313 (54%), Gaps = 28/313 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F G G +E++K + D + V L Q++ ++ + V DR ++++I
Sbjct: 56 DIKYFCGMGKIEMIKN--KRDELEADLVVFNHPLTPSQERNIEKFLECRVMDRTRLILEI 113
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVL 246
F AKT E +LQ+ +A+L Y TR ++ T++ KG L+ R ++
Sbjct: 114 FSLRAKTYEGKLQVELAQLNYQSTR--LVKGWTHLERQKGGIGVRGGPGETQLEIDRRLI 171
Query: 247 MEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRN 306
+R +++ + L K+K R++ R+ +++ PT++ VGYTN GK+TL +T+ D L ++
Sbjct: 172 RQRIKQIAQKLEKVKHHRDLSRSSRKKNNIPTISFVGYTNAGKSTLFNKITNADVLA-KD 230
Query: 307 QLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
QLFATLD T + ++P I++ DT+GFI N+P L+E F TLE+A+ +D+++HV+D
Sbjct: 231 QLFATLDPTLRKVIVPKLGEIIFSDTVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDY 290
Query: 367 SNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA---VPPGERVTEEYD------L 417
++ D+ + V++ L + + +K + V NK+D + P E+ D +
Sbjct: 291 ADEDHKSYIEQVEKVLSEIGIADK---ETICVYNKIDKLENIKPSFVPLEDSDSSVVSRV 347
Query: 418 LISATRGTGLAQL 430
+SA G GL +
Sbjct: 348 YLSAQNGDGLVEF 360
>gi|418636691|ref|ZP_13199036.1| GTP-binding protein HflX [Staphylococcus lugdunensis VCU139]
gi|374840619|gb|EHS04105.1| GTP-binding protein HflX [Staphylococcus lugdunensis VCU139]
Length = 412
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 161/307 (52%), Gaps = 15/307 (4%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D + E +AL + Q VV + D K + GKG ++ +K + D V V+
Sbjct: 32 DSTMQELQALSQTCQ-LEVVSQITQNRQQVDHKYYVGKGKIDEIKAFI--DLHDIDVVVA 88
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY---- 223
D L Q K L D V + DR ++++IF AK++E +LQ+ +A+L YL R
Sbjct: 89 NDELTTAQSKSLNDALDVKIIDRTQLILEIFALRAKSKEGKLQVELAQLDYLLPRLQGHG 148
Query: 224 ----RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
R + L+ R + R ++K L + RE RNK+++ + +
Sbjct: 149 KSLSRLGGGIGTRGPGETKLEMDRRHIRTRINEIKHQLQTIVEHRERYRNKREQNQVFQI 208
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK++ L+ + S +N LFATLD T + L ++ DT+GFI +
Sbjct: 209 ALVGYTNAGKSSWFNVLSGE-STYEQNLLFATLDPKTRQIQLNEGFNVIITDTVGFIQKL 267
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PTTL+ FK TLE+A ADI++H+VD S+P++ Q + V++ +Q LE+++ + V V+
Sbjct: 268 PTTLVAAFKSTLEEAKNADILLHIVDASHPEFRSQYETVNQLIQELEMDQ--IPQV-VLF 324
Query: 400 NKVDAVP 406
NK D P
Sbjct: 325 NKRDLCP 331
>gi|407800371|ref|ZP_11147233.1| hypothetical protein OCGS_2306 [Oceaniovalibus guishaninsula
JLT2003]
gi|407057600|gb|EKE43574.1| hypothetical protein OCGS_2306 [Oceaniovalibus guishaninsula
JLT2003]
Length = 416
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 183/367 (49%), Gaps = 26/367 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
V ++ L FG G L LK ++ D V V + V + QQ+ L+ + V
Sbjct: 38 VAGGEVVRLPRAHPGHLFGTGKLAELKARIEADD-VGLVLIDGPVSPV-QQRNLEKEWSV 95
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
V DR ++++IF A+TRE LQ+ +A L Y R R + T++ +G
Sbjct: 96 KVLDRTGLILEIFSDRARTREGVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGP 153
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+++ R + ++ +L+K L+K+ RE+ R + + +P VA+VGYTN GK+TL
Sbjct: 154 GETQIEADRRAIDDQIVRLRKQLDKVVRTRELHRAARAKVPYPIVALVGYTNAGKSTLFN 213
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT D + ++ LFATLD T LP+ I+ DT+GFIS++PT L+ F+ TLE+
Sbjct: 214 RLTGADVMA-KDMLFATLDPTMRRIDLPSGAEIILSDTVGFISDLPTQLVAAFRATLEEV 272
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEE 414
+ AD+I+HV D+++P+ Q + V+ L L +++ + V NK D +
Sbjct: 273 LAADLIVHVRDIAHPETEAQARDVEAILTELGVDDATPR--IEVWNKADLLAEDAASATA 330
Query: 415 YD-------LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
L++SA G G+ L + + +A RK + + + G WL + V
Sbjct: 331 AQAARRDDVLILSALTGAGIDTLTAAITAALDEARMRKTLVL-PHAAGKRRAWLYEQGVV 389
Query: 468 SNIREDD 474
+ R+ +
Sbjct: 390 EDERQSE 396
>gi|238924771|ref|YP_002938287.1| small GTP-binding protein domain protein [Eubacterium rectale ATCC
33656]
gi|238876446|gb|ACR76153.1| small GTP-binding protein domain protein [Eubacterium rectale ATCC
33656]
gi|291527180|emb|CBK92766.1| GTP-binding protein HflX [Eubacterium rectale M104/1]
Length = 415
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 157/285 (55%), Gaps = 15/285 (5%)
Query: 165 FVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY- 223
V D L QQK L+ V DR ++++ IF + A T E ++Q+ +A+L Y +R
Sbjct: 82 IVCDDELSPAQQKNLETYLDTKVMDRTLVILDIFASRATTSEGKIQVELAQLKYRLSRLS 141
Query: 224 -------RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
R + L+ R ++ +R +L++ L +++ R++ R K+++ K
Sbjct: 142 GLGKSMSRLGGGIGTRGPGEKKLEVDRRLINDRIAQLRRELKEVQKHRDITRAKREKNKV 201
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P VA+VGYTN GK+TL+ LT+ D L ++LFATLD TT L + ++L DT+GFI
Sbjct: 202 PVVAIVGYTNAGKSTLLNHLTEADVL-EEDKLFATLDPTTRILALDGKQQVLLTDTVGFI 260
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
+P L+E FK TLE+A ADII HVVD SN +Q +TL L +++K +
Sbjct: 261 RKLPHHLIEAFKSTLEEAKYADIIFHVVDASNMQREKQMFITYQTLDDLGVKDK---KFV 317
Query: 397 VVGNKVDAVPPGERVTE---EYDLLISATRGTGLAQLKEKVQDMI 438
+ NK DA E + + +Y L ISA + GL ++K +++++
Sbjct: 318 TLFNKQDARTDNEPLHDFRADYTLNISAAKDLGLDEVKSLLEEIL 362
>gi|336451944|ref|ZP_08622378.1| GTP-binding protein HflX [Idiomarina sp. A28L]
gi|336281277|gb|EGN74560.1| GTP-binding protein HflX [Idiomarina sp. A28L]
Length = 427
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 178/345 (51%), Gaps = 25/345 (7%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E K LVSS G V S + D + F G G E + V +F
Sbjct: 27 LEELKLLVSSA-GVEAVSVITTSRHAPDARLFIGSGKTEEVAAMVEATGAEIVIFNHS-- 83
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
L Q++ ++ + V DR +++ IF A+T E +LQ+ +A+L ++ TR I T
Sbjct: 84 LSPSQERNIEREVKCRVLDRTGLILDIFAQRARTHEGKLQVELAQLRHISTRL--IRGWT 141
Query: 231 NMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
++ KG L++ R ++ R + + L K+ QRE R +QR + PT+A
Sbjct: 142 HLERQKGGIGLRGPGETQLETDRRLIRGRIKNILARLEKVSKQREQGRRSRQRAEIPTIA 201
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+VGYTN GK+TL LTD D + +QLFATLD T + LP+ +++ DT+GFI ++P
Sbjct: 202 LVGYTNAGKSTLFNRLTDSD-VYAADQLFATLDPTLRKYELPDVGSLIFADTVGFIRHLP 260
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
L+ FK TL++ A++++HV+D + L + VD+ L + E L+V N
Sbjct: 261 HDLVAAFKATLQETRDAELLLHVMDCHDERMLDNQHEVDKVLTEIAASEV---PQLLVMN 317
Query: 401 KVDAVPPGE-RVTEEYD-----LLISATRGTGLAQLKEKVQDMIL 439
K+D VP + R+ + D + +SA G G+ L+E + ++++
Sbjct: 318 KLDLVPDLQPRIVRDDDGKPKEVWLSAQTGEGIDLLREALHEILV 362
>gi|291526082|emb|CBK91669.1| GTP-binding protein HflX [Eubacterium rectale DSM 17629]
Length = 415
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 157/285 (55%), Gaps = 15/285 (5%)
Query: 165 FVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY- 223
V D L QQK L+ V DR ++++ IF + A T E ++Q+ +A+L Y +R
Sbjct: 82 IVCDDELSPAQQKNLETYLDTKVMDRTLVILDIFASRATTSEGKIQVELAQLKYRLSRLS 141
Query: 224 -------RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
R + L+ R ++ +R +L++ L +++ R++ R K+++ K
Sbjct: 142 GMGKSMSRLGGGIGTRGPGEKKLEVDRRLINDRIAQLRRELKEVQKHRDITRAKREKNKV 201
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P VA+VGYTN GK+TL+ LT+ D L ++LFATLD TT L + ++L DT+GFI
Sbjct: 202 PVVAIVGYTNAGKSTLLNHLTEADVL-EEDKLFATLDPTTRILALDGKQQVLLTDTVGFI 260
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
+P L+E FK TLE+A ADII HVVD SN +Q +TL L +++K +
Sbjct: 261 RKLPHHLIEAFKSTLEEAKYADIIFHVVDASNMQREKQMFITYQTLDDLGVKDK---KFV 317
Query: 397 VVGNKVDAVPPGERVTE---EYDLLISATRGTGLAQLKEKVQDMI 438
+ NK DA E + + +Y L ISA + GL ++K +++++
Sbjct: 318 TLFNKQDARTDNEPLHDFRADYTLNISAAKDLGLDEVKSLLEEIL 362
>gi|442806143|ref|YP_007374292.1| GTPase HflX [Clostridium stercorarium subsp. stercorarium DSM 8532]
gi|442741993|gb|AGC69682.1| GTPase HflX [Clostridium stercorarium subsp. stercorarium DSM 8532]
Length = 597
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 190/366 (51%), Gaps = 23/366 (6%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G VVD+ + S D GKG L + R V+ + A+ + + L Q + +++
Sbjct: 218 GAEVVDTILQKRPSRDPAYLIGKGKLAEIGRIVQ--EKEIALVIFDEELSGTQLRNIENF 275
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNI 234
V DR +++ IF AK+RE ++Q+ +A+L YL R R
Sbjct: 276 TNTKVVDRTGLILDIFGQRAKSREGQVQVELAQLNYLLPRLQGRGITLSRLGGGIGTRGP 335
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ L++ R + R LKK L +++ QR+ R +++R K P VA+VGYTN GK+TL+
Sbjct: 336 GETKLETDRRHIRRRIDYLKKELERIRNQRQTSRRERERNKIPVVALVGYTNAGKSTLLN 395
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
L D D + ++LFATLD TT + L + +L DT+GFI +P L+E FK TLE+A
Sbjct: 396 TLCDAD-VFAEDKLFATLDTTTRKLKLEEGMTVLLSDTVGFIRKLPHHLVEAFKSTLEEA 454
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV-----PPGE 409
+LAD+++ VVD S+P + V+E L L K ++V NK D V P
Sbjct: 455 VLADLLLIVVDASDPFAQDHVRVVNEILSDLGASSK---PSVLVWNKWDLVDKDFHTPFF 511
Query: 410 RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVR-SGGSEYQWLMKHTAVS 468
R + ++ +SA G GL +LK+ +++ + T R +T+ + S G +L ++ VS
Sbjct: 512 R-EKPVEVHVSAITGLGLDELKKAIKNCLKPETER--VTLHIPFSEGWVLPFLYENGMVS 568
Query: 469 NIREDD 474
++ D
Sbjct: 569 SVDYKD 574
>gi|260433544|ref|ZP_05787515.1| GTP-binding protein HflX [Silicibacter lacuscaerulensis ITI-1157]
gi|260417372|gb|EEX10631.1| GTP-binding protein HflX [Silicibacter lacuscaerulensis ITI-1157]
Length = 423
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 213/426 (50%), Gaps = 32/426 (7%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ +V+ P IK +R+ L E+ AL +++ V+ S I+ L FG G
Sbjct: 9 RAWVLHPDIK-SDDQRRDPVP--ALDEAVALAAALPDLDVIGSEIVRLPRAQPGLLFGSG 65
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
+E L + + + V + V + QQ+ L+ ++V + DR ++++IF A+TRE
Sbjct: 66 KIEELGARF-AENEIELVLIDGPVTPV-QQRNLEKAWKVKILDRTGLILEIFSDRARTRE 123
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKK 255
LQ+ +A L Y R R + T++ +G +++ R + ++ +L++
Sbjct: 124 GVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDDQLVRLRR 181
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L K+ R + R + + +P VA+VGYTN GK+TL LT + + ++ LFATLD T
Sbjct: 182 QLQKVVKTRTLHRAARAKVPYPIVALVGYTNAGKSTLFNRLTGAEVMA-KDMLFATLDPT 240
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
LP+ ++ DT+GFISN+PT L+ F+ TLE+ + AD+I+HV D+S+P+ +Q
Sbjct: 241 MRRIELPDGPEVILSDTVGFISNLPTELVAAFRATLEEVLAADLIVHVRDISHPETEEQA 300
Query: 376 QHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER----VTEEYD---LLISATRGTGLA 428
+ V L L +++ + L V NK+D + +R E D ISA G G+
Sbjct: 301 EDVRSILASLGVDDTRPQ--LEVWNKIDLLSDEDRQAVQARAERDPAVFPISAVTGEGID 358
Query: 429 QLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTD 488
L ++ IL+ + + + G + WL + V R++ + + + V+ TD
Sbjct: 359 PLLTEIA-TILQGVRWEEVLKLGFADGDKRAWLFRQDVV---RDEKQTEDGFEITVLWTD 414
Query: 489 VIMNKF 494
+F
Sbjct: 415 KQAAQF 420
>gi|357025717|ref|ZP_09087833.1| GTP-binding proten HflX [Mesorhizobium amorphae CCNWGS0123]
gi|355542382|gb|EHH11542.1| GTP-binding proten HflX [Mesorhizobium amorphae CCNWGS0123]
Length = 463
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 148/280 (52%), Gaps = 21/280 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT---RYR 224
QQ+ L+ V DR ++++IF A+T+E LQ+ +A L Y WT R R
Sbjct: 120 QQRNLEKELNAKVLDRTGLILEIFGERARTKEGTLQVELAHLNYQKGRLVRSWTHLERQR 179
Query: 225 TIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGY 284
+ ++S R +L ++ KLK L ++ R++ R K+++ FP VA+VGY
Sbjct: 180 GGA-GFLGGPGETQIESDRRILQDKIIKLKHELETVRRTRDLHRAKRKKVPFPVVAIVGY 238
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
TN GK+TL LT L + LFATLD T LP+ I+ DT+GFIS++PT L+
Sbjct: 239 TNAGKSTLFNKLTGAGVLA-EDMLFATLDPTLRRVRLPHGTPIILSDTVGFISDLPTHLV 297
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA 404
F+ TLE+ + AD++IH+ D+S+PD Q + V+ L L ++ + V+ V NK+D
Sbjct: 298 AAFRATLEEVVEADLVIHLRDISDPDTAAQAEDVERILADLGVDAGDTKRVIEVWNKIDL 357
Query: 405 VPPGERVTEEYD---------LLISATRGTGLAQLKEKVQ 435
+ G R D + ISA G GL LK ++
Sbjct: 358 LDEGNRARLLADGNDGRKAPPIAISAVTGEGLDALKALIE 397
>gi|313668381|ref|YP_004048665.1| GTP-binding protein [Neisseria lactamica 020-06]
gi|313005843|emb|CBN87299.1| GTP-binding protein [Neisseria lactamica 020-06]
Length = 392
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 166/353 (47%), Gaps = 35/353 (9%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKS---FFGKGNLELLKRQVRGDARVTAVFVS 167
LAE+ LV + G + I+ D+ F G G L V D VF
Sbjct: 44 LAEAVELVKAAGG----NPVIVETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFN- 98
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTR----Y 223
L Q++ L+ + Q V DR +++ IF A+T+E RLQ+ +A+L +L R Y
Sbjct: 99 -HELTPTQERNLEKILQCRVLDRVGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGY 157
Query: 224 RTIEDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ KG L++ R ++ R LKK L LK QR + R ++ T
Sbjct: 158 GHLQSQRGGIGMKGPGETKLETDRRLIAHRINALKKQLANLKKQRALRRKPRESGGIKTF 217
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+ GYTN GK+TL LT + NQLFATLD T + + I+ DT+GF+SN+
Sbjct: 218 ALAGYTNAGKSTLFNRLTKAGAYA-ENQLFATLDTTARRLYIHPKCSIILTDTVGFVSNL 276
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
P L+ F TLE+ AD+++HVVD + P+ QQ + V+ LQ + + + V
Sbjct: 277 PHKLISAFSATLEETAQADVLLHVVDAAAPNSGQQIEDVENVLQEIHAGDI---PCIKVY 333
Query: 400 NKVDAVPPGER-----------VTEEYDLLISATRGTGLAQLKEKVQDMILKA 441
NK D +P R +T Y +SA TG+ L+E + + A
Sbjct: 334 NKTDLLPSEARQNGIKRDSTGKITAVY---LSAAENTGIGALREAIAEYCAAA 383
>gi|56696948|ref|YP_167310.1| GTP-binding protein HflX [Ruegeria pomeroyi DSS-3]
gi|56678685|gb|AAV95351.1| GTP-binding protein HflX [Ruegeria pomeroyi DSS-3]
Length = 424
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 182/367 (49%), Gaps = 26/367 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VV S I+ L FG G +E L + D V V + L QQ+ L+ ++V
Sbjct: 46 VVGSGIVRLPKPHPGHLFGSGKVEELA-TLFHDNEVELVLID-GPLSPVQQRNLEKAWKV 103
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
+ DR ++++IF A+TRE LQ+ +A L Y R R + T++ +G
Sbjct: 104 KILDRTGLILEIFSDRARTREGVLQVEMAALSY--QRTRLVRAWTHLERQRGGLGFVGGP 161
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+++ R + E+ +LK+ L+K+ RE+ R + + +P VA+VGYTN GK+TL
Sbjct: 162 GETQIEADRRAIDEQLVRLKRQLDKVVKTRELHRKARAKVPYPIVALVGYTNAGKSTLFN 221
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
LT + + ++ LFATLD T +LP+ ++ DT+GFIS++PT L+ F+ TLE+
Sbjct: 222 RLTGAEVMA-KDMLFATLDPTMRRVVLPDGPEVILSDTVGFISDLPTELVAAFRATLEEV 280
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG------ 408
+ AD+I+HV D+ + +Q + V+ L L ++E V NKVD + P
Sbjct: 281 LAADLIVHVRDIHHAATEEQARDVETILASLGVDEG--RPKFEVWNKVDLLDPDKRAALR 338
Query: 409 ERVTEEYDLL-ISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV 467
ER + L +SA G GL L + + + + +T+ + G WL V
Sbjct: 339 ERTARDPSLFAVSAVTGEGLESLLTAIAEALAETRSEAVLTLGF-ADGKRRAWLFAQDVV 397
Query: 468 SNIREDD 474
+ D
Sbjct: 398 QAEEQSD 404
>gi|407455093|ref|YP_006733984.1| GTP-binding proten HflX [Chlamydia psittaci GR9]
gi|407457827|ref|YP_006736132.1| GTP-binding proten HflX [Chlamydia psittaci WS/RT/E30]
gi|405781636|gb|AFS20385.1| GTP-binding proten HflX [Chlamydia psittaci GR9]
gi|405785403|gb|AFS24149.1| GTP-binding proten HflX [Chlamydia psittaci WS/RT/E30]
Length = 462
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 165/318 (51%), Gaps = 22/318 (6%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ + V DR ++++IF A T EA LQ+ +A YL R + +
Sbjct: 113 QQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLPRLKRMWGHLSRQK 172
Query: 227 -EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
+ KG ++ R ++ ER KL L ++ QR+ R K+++ P+ A+
Sbjct: 173 SGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTLDLKSVEKQRKERRKAKEKRGIPSFAL 232
Query: 282 VGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPT 341
+GYTN GK+TL+ LT ++ V ++LFATLD T +LP+ R+L DT+GFI +P
Sbjct: 233 IGYTNSGKSTLLNLLTSAETYV-EDKLFATLDPKTRRCVLPSGQRVLVTDTVGFIRKLPH 291
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
TL+ FK TLE A+ D+++HVVD S+P + + E L+ L ++ ++ V NK
Sbjct: 292 TLVAAFKSTLEAALHEDVLLHVVDASHPLAFEHIETTKEILKELGVDHP---KIITVLNK 348
Query: 402 VDAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGS 456
+DA+P G+ R+ +LISA G G+ L E + D+I + + + G
Sbjct: 349 IDALPHGKASTKLRLLSPRAVLISAKTGEGIQNLLEAMTDVITEGFPEVTLKFSYKDYGK 408
Query: 457 EYQWLMKHTAVSNIREDD 474
+ +S+ R+DD
Sbjct: 409 FTELYDAGLVLSHRRKDD 426
>gi|297544479|ref|YP_003676781.1| GTP-binding proten HflX [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842254|gb|ADH60770.1| GTP-binding proten HflX [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 413
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 177/351 (50%), Gaps = 24/351 (6%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
+ K + GKG LE LK V + + D L Q K ++D V V DR +++
Sbjct: 52 TIHKAHYIGKGKLEELKFFVENQE--ADLIIVNDELTGTQIKNMEDFLNVKVIDRTNLIL 109
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLM 247
IF A+++E LQ+ +A+L Y R R + L++ R +
Sbjct: 110 DIFAKRARSKEGMLQVELAQLKYRLPRLVGMGGQLSRLGGGIGTRGPGETKLEADRRHIQ 169
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
R + ++K L ++K R++ R+++++ + P VA+VGYTN GK+TL+ ALT + V ++
Sbjct: 170 NRIKAIEKKLEEIKRHRDLQRSRRKKNQVPVVAIVGYTNAGKSTLLNALTKAEVYV-EDK 228
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T +LP+ ++ +DT+GFI +P L+E FK TLE+ AD+++HV+DV+
Sbjct: 229 LFATLDPTARRLILPSGREVILIDTVGFIRKLPHDLVEAFKSTLEEVKYADLLLHVIDVT 288
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD---AVPPGERVTEEYDLLISATRG 424
+PD ++ + V+ L L I + V NK+D V G E ++ ISA
Sbjct: 289 SPDMEEKIKVVERVLSDL---GAINIPKINVFNKIDLLEVVLKG----NEREVYISAKNK 341
Query: 425 TGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV--SNIRED 473
G L E ++ I K N + EY +L + T + N ED
Sbjct: 342 IGFDNLLEAIEREIFKDVEVVNFLLPY-DKTKEYNYLKEKTKIIEENYNED 391
>gi|410858244|ref|YP_006974184.1| putative GTP-binding protein [Chlamydia psittaci 01DC12]
gi|410811139|emb|CCO01783.1| putative GTP-binding protein [Chlamydia psittaci 01DC12]
Length = 462
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 165/318 (51%), Gaps = 22/318 (6%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ + V DR ++++IF A T EA LQ+ +A YL R + +
Sbjct: 113 QQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLPRLKRMWGHLSRQK 172
Query: 227 -EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
+ KG ++ R ++ ER KL L ++ QR+ R K+++ P+ A+
Sbjct: 173 SGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTLDLKSVEKQRKERRKAKEKRGIPSFAL 232
Query: 282 VGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPT 341
+GYTN GK+TL+ LT ++ V ++LFATLD T +LP+ R+L DT+GFI +P
Sbjct: 233 IGYTNSGKSTLLNLLTSAETYV-EDKLFATLDPKTRRCVLPSGQRVLVTDTVGFIRKLPH 291
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
TL+ FK TLE A+ D+++HVVD S+P + + E L+ L ++ ++ V NK
Sbjct: 292 TLVAAFKSTLEAALHEDVLLHVVDASHPLAFEHIETTKEILKELGVDHP---KIITVLNK 348
Query: 402 VDAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGS 456
+DA+P G+ R+ +LISA G G+ L E + D+I + + + G
Sbjct: 349 IDALPHGKAFTKLRLLSPRAVLISAKTGEGIQNLLEAMTDVITEGFPEVTLKFSYKDYGK 408
Query: 457 EYQWLMKHTAVSNIREDD 474
+ +S+ R+DD
Sbjct: 409 FTELYDAGLVLSHRRKDD 426
>gi|407460442|ref|YP_006738217.1| GTP-binding proten HflX [Chlamydia psittaci WC]
gi|405787157|gb|AFS25901.1| GTP-binding proten HflX [Chlamydia psittaci WC]
Length = 462
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 165/318 (51%), Gaps = 22/318 (6%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ + V DR ++++IF A T EA LQ+ +A YL R + +
Sbjct: 113 QQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLPRLKRMWGHLSRQK 172
Query: 227 -EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
+ KG ++ R ++ ER KL L ++ QR+ R K+++ P+ A+
Sbjct: 173 SGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTLDLKSVEKQRKERRKAKEKRGIPSFAL 232
Query: 282 VGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPT 341
+GYTN GK+TL+ LT ++ V ++LFATLD T +LP+ R+L DT+GFI +P
Sbjct: 233 IGYTNSGKSTLLNLLTSAETYV-EDKLFATLDPKTRRCVLPSGQRVLVTDTVGFIRKLPH 291
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
TL+ FK TLE A+ D+++HVVD S+P + + E L+ L ++ ++ V NK
Sbjct: 292 TLVAAFKSTLEAALHEDVLLHVVDASHPLAFEHIETTKEILKELGVDHP---KIITVLNK 348
Query: 402 VDAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGS 456
+DA+P G+ R+ +LISA G G+ L E + D+I + + + G
Sbjct: 349 IDALPHGKASTKLRLLSPRAVLISAKTGEGIQNLLEAMTDVITEGFPEVTLKFSYKDYGK 408
Query: 457 EYQWLMKHTAVSNIREDD 474
+ +S+ R+DD
Sbjct: 409 FTELYDAGLVLSHRRKDD 426
>gi|172040561|ref|YP_001800275.1| GTP-binding protein [Corynebacterium urealyticum DSM 7109]
gi|448823539|ref|YP_007416704.1| putative GTP-binding protein [Corynebacterium urealyticum DSM 7111]
gi|171851865|emb|CAQ04841.1| putative GTP-binding protein [Corynebacterium urealyticum DSM 7109]
gi|448277036|gb|AGE36460.1| putative GTP-binding protein [Corynebacterium urealyticum DSM 7111]
Length = 506
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 164/321 (51%), Gaps = 29/321 (9%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G+G + L ++ T + L Q L++ V DR M+++ I
Sbjct: 116 DPGTYIGRGKVSELAEIIQSTGADTVICDGE--LSPGQMIALENALNAKVIDRTMLILDI 173
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------------LD 240
F HAK+RE + Q+++A++ YL R R T+++ G ++
Sbjct: 174 FAQHAKSREGKAQVSLAQMEYLINRVRGW--GTSLSRQTGGRAGSNGGVGLRGPGETKIE 231
Query: 241 SKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDD 300
+ R L +L+K + +K R+ R ++ P VA+ GYTN GK++LI ALT
Sbjct: 232 ADRRRLRAEMARLRKEIAAMKTSRDTKRQRRDASAVPQVAIAGYTNAGKSSLINALTGAG 291
Query: 301 SLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADII 360
LV + LFATLD TT L + +++ DT+GF+ ++PT L+E F+ TLE+ M AD++
Sbjct: 292 VLV-EDALFATLDPTTRRAELADGRSVIFSDTVGFVRHLPTQLVEAFRSTLEEVMAADVV 350
Query: 361 IHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVVGNKVDAVPPGERVTEEYDL- 417
+HVVD S+P L+Q + V+ + + E + ++VV NK+D P + L
Sbjct: 351 LHVVDGSDPFPLEQIRSVNTVISEIVAESGQDAPPEIMVV-NKIDKADPLVLAELRHKLN 409
Query: 418 ---LISATRGTGLAQLKEKVQ 435
+SA G G+ +L+ +++
Sbjct: 410 DVVFVSAHTGEGIDELETRLE 430
>gi|339498977|ref|YP_004697012.1| GTP-binding proten HflX [Spirochaeta caldaria DSM 7334]
gi|338833326|gb|AEJ18504.1| GTP-binding proten HflX [Spirochaeta caldaria DSM 7334]
Length = 423
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 185/349 (53%), Gaps = 22/349 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
LA A ++ G ++D +I+ + K G G E + + R + V + D+
Sbjct: 32 LARELAGLAETLGVCILDQSIVKIREKHPKYGMGLGKAEEIAERAR-ELGVDCLIFDQDI 90
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAEL----PYLWTRYRTI 226
QQ+ ++L + DR ++IQIF + A+TREA LQI +A+L P L +Y +
Sbjct: 91 TP-SQQRNWEELTGISAIDRQELIIQIFASRARTREAELQIELAQLKHSLPRLTHKYIDL 149
Query: 227 EDATNMNI-TKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
TKG ++K R ++ R +L+ + +++ R R K+++ PT A+
Sbjct: 150 SRQRGGRYGTKGAGETKLELDRRSILRRIHQLEAEIKEVRQHRSTQRKKREKIPIPTCAL 209
Query: 282 VGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPT 341
VGYTN GK++L+ A+T+ + L ++LFATLD TT + +L DT+GFI +P
Sbjct: 210 VGYTNAGKSSLLNAMTNAEVLA-EDKLFATLDPTTRRLEIGRGQPVLLTDTVGFIRRLPH 268
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL-ELEEKILEHVLVVGN 400
L++ F TLE+A LADI++ V+D ++PD +H D TL L EL + ++++ N
Sbjct: 269 DLVDAFHATLEEAALADILLIVLDAADPDV---DRHYDTTLGVLKELGAEQTPKIIIL-N 324
Query: 401 KVDAVPPGERVTE---EY--DLLISATRGTGLAQLKEKVQDMILKATGR 444
K+D V ER+ E +Y + ISA TGL L ++ +I A+ R
Sbjct: 325 KIDKVSSPERLQELEKQYSDSVSISALNRTGLDTLARRIDLLISGASCR 373
>gi|115524769|ref|YP_781680.1| HSR1-like GTP-binding protein [Rhodopseudomonas palustris BisA53]
gi|115518716|gb|ABJ06700.1| GTP-binding protein, HSR1-related protein [Rhodopseudomonas
palustris BisA53]
Length = 455
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 224/458 (48%), Gaps = 45/458 (9%)
Query: 66 ESDEFKTIRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAES-KALVSSIQGW 124
E D + E +TG + VV P+++ ++ N+ D LA S +A + G
Sbjct: 7 EGDADRPRPSEHETG------RALVVGPYLR----VRGNSAADAHLARSAQARLDEAAGL 56
Query: 125 RV-VDSTIISLL-----SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKM 178
+ +D T+ L ++ GKG +E + ++ A + V L QQ+
Sbjct: 57 ALAIDLTVPEALLTPISQIRPATYLGKGKVEDVLAAIK--AHEVGLVVMDCALSPIQQRN 114
Query: 179 LQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF 238
L+ + V DR ++++IF AKTRE LQ+ +A L Y R R + T++ +G
Sbjct: 115 LEKAWGTKVLDRTGLILEIFGRRAKTREGALQVELAHLNY--QRSRLVRSWTHLERQRGG 172
Query: 239 -----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
+++ R ++ +R K++ L K++ R + R +QR + VA+VGYTN
Sbjct: 173 FGFLGGPGETQIEADRRLIGDRITKIESELKKVQSTRRLHRAGRQRVPYRVVALVGYTNA 232
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GK+TL LT + + + LFATLD T +LP+ + + DT+GFISN+PT L+ F
Sbjct: 233 GKSTLFNRLTRAE-VQAADMLFATLDPTLRALVLPHGGKAMLSDTVGFISNLPTQLVAAF 291
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP 407
+ TLE+ + AD+I+HV D+S+ D Q+ VD L+ L + ++ V NK+D P
Sbjct: 292 RATLEEVLEADLILHVRDISHEDADAQQDDVDAVLRQLGIAPGTGSPIIEVWNKIDRFSP 351
Query: 408 ----------GERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSE 457
R +E L+SA G GL L + ++D + + ++T+ + G+
Sbjct: 352 EQQEELQNIAARRDSEHPCHLVSAVTGQGLDALLQAIEDRLAETRTTLDLTVDA-ADGAG 410
Query: 458 YQWLMKHTAVSNIR-EDDTSAEHLLLDVVMTDVIMNKF 494
WL ++ V + + +D A + +D D ++ +F
Sbjct: 411 VSWLHRNAEVLDKQLQDGRYAMTVRVDETKRDAVIARF 448
>gi|406594858|ref|YP_006741420.1| GTP-binding proten HflX [Chlamydia psittaci MN]
gi|405783290|gb|AFS22038.1| GTP-binding proten HflX [Chlamydia psittaci MN]
Length = 462
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 165/318 (51%), Gaps = 22/318 (6%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ + V DR ++++IF A T EA LQ+ +A YL R + +
Sbjct: 113 QQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLPRLKRMWGHLSRQK 172
Query: 227 -EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
+ KG ++ R ++ ER KL L ++ QR+ R K+++ P+ A+
Sbjct: 173 SGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTLDLKSVEKQRKERRKAKEKRGIPSFAL 232
Query: 282 VGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPT 341
+GYTN GK+TL+ LT ++ V ++LFATLD T +LP+ R+L DT+GFI +P
Sbjct: 233 IGYTNSGKSTLLNLLTSAETYV-EDKLFATLDPKTRRCVLPSGQRVLVTDTVGFIRKLPH 291
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
TL+ FK TLE A+ D+++HVVD S+P + + E L+ L ++ ++ V NK
Sbjct: 292 TLVAAFKSTLEAALHEDVLLHVVDASHPLAFEHIETTKEILKELGVDHP---KIITVLNK 348
Query: 402 VDAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGS 456
+DA+P G+ R+ +LISA G G+ L E + D+I + + + G
Sbjct: 349 IDALPHGKAFTKLRLLSPRAVLISAKTGEGIQNLLEAMTDVITEGFPEVTLKFSYKDYGK 408
Query: 457 EYQWLMKHTAVSNIREDD 474
+ +S+ R+DD
Sbjct: 409 FTELYDAGLVLSHRRKDD 426
>gi|329942586|ref|ZP_08291396.1| GTP-binding proten HflX [Chlamydophila psittaci Cal10]
gi|332287216|ref|YP_004422117.1| GTP-binding protein [Chlamydophila psittaci 6BC]
gi|384450370|ref|YP_005662970.1| GTP-binding protein HflX [Chlamydophila psittaci 6BC]
gi|384451369|ref|YP_005663967.1| GTP-binding protein [Chlamydophila psittaci 01DC11]
gi|384452345|ref|YP_005664942.1| GTP-binding protein [Chlamydophila psittaci 08DC60]
gi|384453319|ref|YP_005665915.1| GTP-binding protein [Chlamydophila psittaci C19/98]
gi|384454297|ref|YP_005666892.1| GTP-binding protein [Chlamydophila psittaci 02DC15]
gi|392376467|ref|YP_004064245.1| putative GTP-binding protein [Chlamydophila psittaci RD1]
gi|407453763|ref|YP_006732871.1| GTP-binding proten HflX [Chlamydia psittaci 84/55]
gi|407456466|ref|YP_006735039.1| GTP-binding proten HflX [Chlamydia psittaci VS225]
gi|449070921|ref|YP_007438001.1| putative GTP-binding protein [Chlamydophila psittaci Mat116]
gi|313847810|emb|CBY16801.1| putative GTP-binding protein [Chlamydophila psittaci RD1]
gi|325506512|gb|ADZ18150.1| GTP-binding protein [Chlamydophila psittaci 6BC]
gi|328815496|gb|EGF85484.1| GTP-binding proten HflX [Chlamydophila psittaci Cal10]
gi|328914464|gb|AEB55297.1| GTP-binding protein HflX [Chlamydophila psittaci 6BC]
gi|334692100|gb|AEG85319.1| GTP-binding protein [Chlamydophila psittaci C19/98]
gi|334693079|gb|AEG86297.1| GTP-binding protein [Chlamydophila psittaci 01DC11]
gi|334694054|gb|AEG87271.1| GTP-binding protein [Chlamydophila psittaci 02DC15]
gi|334695034|gb|AEG88250.1| GTP-binding protein [Chlamydophila psittaci 08DC60]
gi|405780522|gb|AFS19272.1| GTP-binding proten HflX [Chlamydia psittaci 84/55]
gi|405783727|gb|AFS22474.1| GTP-binding proten HflX [Chlamydia psittaci VS225]
gi|449039429|gb|AGE74853.1| putative GTP-binding protein [Chlamydophila psittaci Mat116]
Length = 462
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 165/318 (51%), Gaps = 22/318 (6%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ + V DR ++++IF A T EA LQ+ +A YL R + +
Sbjct: 113 QQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLPRLKRMWGHLSRQK 172
Query: 227 -EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
+ KG ++ R ++ ER KL L ++ QR+ R K+++ P+ A+
Sbjct: 173 SGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTLDLKSVEKQRKERRKAKEKRGIPSFAL 232
Query: 282 VGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPT 341
+GYTN GK+TL+ LT ++ V ++LFATLD T +LP+ R+L DT+GFI +P
Sbjct: 233 IGYTNSGKSTLLNLLTSAETYV-EDKLFATLDPKTRRCVLPSGQRVLVTDTVGFIRKLPH 291
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
TL+ FK TLE A+ D+++HVVD S+P + + E L+ L ++ ++ V NK
Sbjct: 292 TLVAAFKSTLEAALHEDVLLHVVDASHPLAFEHIETTKEILKELGVDHP---KIITVLNK 348
Query: 402 VDAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGS 456
+DA+P G+ R+ +LISA G G+ L E + D+I + + + G
Sbjct: 349 IDALPHGKASTKLRLLSPRAVLISAKTGEGIQNLLEAMTDVITEGFPEVTLKFSYKDYGK 408
Query: 457 EYQWLMKHTAVSNIREDD 474
+ +S+ R+DD
Sbjct: 409 FTELYDAGLVLSHRRKDD 426
>gi|406593201|ref|YP_006740380.1| GTP-binding proten HflX [Chlamydia psittaci NJ1]
gi|405789073|gb|AFS27815.1| GTP-binding proten HflX [Chlamydia psittaci NJ1]
Length = 462
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 165/318 (51%), Gaps = 22/318 (6%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ + V DR ++++IF A T EA LQ+ +A YL R + +
Sbjct: 113 QQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLPRLKRMWGHLSRQK 172
Query: 227 -EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
+ KG ++ R ++ ER KL L ++ QR+ R K+++ P+ A+
Sbjct: 173 SGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTLDLKSVEKQRKERRKAKEKRGIPSFAL 232
Query: 282 VGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPT 341
+GYTN GK+TL+ LT ++ V ++LFATLD T +LP+ R+L DT+GFI +P
Sbjct: 233 IGYTNSGKSTLLNLLTSAETYV-EDKLFATLDPKTRRCVLPSGQRVLVTDTVGFIRKLPH 291
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
TL+ FK TLE A+ D+++HVVD S+P + + E L+ L ++ ++ V NK
Sbjct: 292 TLVAAFKSTLEAALHEDVLLHVVDASHPLAFEHIETTKEILKELGVDHP---KIITVLNK 348
Query: 402 VDAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGS 456
+DA+P G+ R+ +LISA G G+ L E + D+I + + + G
Sbjct: 349 IDALPHGKASTKLRLLSPRAVLISAKTGEGIQNLLEAMTDVITEGFPEVTLKFSYKDYGK 408
Query: 457 EYQWLMKHTAVSNIREDD 474
+ +S+ R+DD
Sbjct: 409 FTELYDAGLVLSHRRKDD 426
>gi|289578198|ref|YP_003476825.1| GTP-binding proten HflX [Thermoanaerobacter italicus Ab9]
gi|289527911|gb|ADD02263.1| GTP-binding proten HflX [Thermoanaerobacter italicus Ab9]
Length = 413
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 177/351 (50%), Gaps = 24/351 (6%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
+ K + GKG LE LK V + + D L Q K ++D V V DR +++
Sbjct: 52 TIHKAHYIGKGKLEELKFFVENQE--ADLIIVNDELTGTQIKNMEDFLNVKVIDRTNLIL 109
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLM 247
IF A+++E LQ+ +A+L Y R R + L++ R +
Sbjct: 110 DIFAKRARSKEGMLQVELAQLKYRLPRLVGIGGQLSRLGGGIGTRGPGETKLETDRRHIQ 169
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
R + ++K L ++K R++ R+++++ + P VA+VGYTN GK+TL+ ALT + V ++
Sbjct: 170 NRIKAIEKKLEEIKRHRDLQRSRRKKNQVPVVAIVGYTNAGKSTLLNALTKAEVYV-EDK 228
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T +LP+ ++ +DT+GFI +P L+E FK TLE+ AD+++HV+DV+
Sbjct: 229 LFATLDPTARRLILPSGREVILIDTVGFIRKLPHDLVEAFKSTLEEVKYADLLLHVIDVT 288
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD---AVPPGERVTEEYDLLISATRG 424
+PD ++ + V+ L L I + V NK+D V G E ++ ISA
Sbjct: 289 SPDMEEKIKVVERVLSDL---GAINIPKINVFNKIDLLEVVLKG----NEREVYISAKNK 341
Query: 425 TGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAV--SNIRED 473
G L E ++ I K N + EY +L + T + N ED
Sbjct: 342 IGFDNLLEAIEREIFKDVEVVNFLLPY-DKTKEYNYLKEKTKIIEENYNED 391
>gi|208779443|ref|ZP_03246789.1| protease, GTP-binding subunit [Francisella novicida FTG]
gi|208745243|gb|EDZ91541.1| protease, GTP-binding subunit [Francisella novicida FTG]
Length = 435
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 171/313 (54%), Gaps = 28/313 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F G G +E++K + D + V L Q++ ++ + V DR ++++I
Sbjct: 56 DIKYFCGMGKIEMIKN--KRDELEADLVVFNHPLTPSQERNIEKFLECRVMDRTRLILEI 113
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVL 246
F AKT E +LQ+ +A+L Y TR ++ T++ KG L+ R ++
Sbjct: 114 FSLRAKTYEGKLQVELAQLNYQSTR--LVKGWTHLERQKGGIGVRGGPGETQLEIDRRLI 171
Query: 247 MEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRN 306
+R +++ + L K+K R++ R+ +++ PT++ VGYTN GK+TL +T+ D L ++
Sbjct: 172 RQRIKQITQKLEKVKHHRDLSRSSRKKNNIPTISFVGYTNAGKSTLFNKITNADVLA-KD 230
Query: 307 QLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
QLFATLD T + ++P +++ DT+GFI N+P L+E F TLE+A+ +D+++HV+D
Sbjct: 231 QLFATLDPTLRKVIVPKLGEVIFSDTVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDY 290
Query: 367 SNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA---VPPGERVTEEYD------L 417
++ D+ + V++ L + + +K + V NK+D + P E+ D +
Sbjct: 291 ADEDHKSYIEQVEKVLSEIGIADK---ETICVYNKIDKLENIKPSFVPLEDSDSSVVARV 347
Query: 418 LISATRGTGLAQL 430
+SA G GL +
Sbjct: 348 YLSAQNGDGLVEF 360
>gi|152996644|ref|YP_001341479.1| HSR1-like GTP-binding protein [Marinomonas sp. MWYL1]
gi|150837568|gb|ABR71544.1| GTP-binding protein HSR1-related [Marinomonas sp. MWYL1]
Length = 429
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 186/363 (51%), Gaps = 27/363 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D + F G G L +K V D V + L Q++ L+ + Q V DR +++ I
Sbjct: 54 DARYFIGTGKLAEIKDIV--DREEAQVVLFDHALSPSQERNLESVLQCRVLDRTGLILDI 111
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLM 247
F A+T E +LQ+ +A+L ++ TR I T++ KG L++ R +L
Sbjct: 112 FAQRARTHEGKLQVELAQLQHMSTRL--IRGWTHLERQKGGIGMRGPGETQLETDRRLLR 169
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
ER + ++K L K+ QR+ R + R PTV++VGYTN GK+TL T D + +Q
Sbjct: 170 ERIKAIQKRLAKVGSQRDQNRRSRDRSSVPTVSLVGYTNAGKSTLFNRATGAD-VYAADQ 228
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T + I+ DT+GFI +P L++ F+ TL+++ AD+++H+VD +
Sbjct: 229 LFATLDPTLRRLDIEQIGSIVLADTVGFIRQLPHRLIKAFQATLKESSEADLLLHIVDAA 288
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE-RVTEE-----YDLLISA 421
+ + +HVD L+ + E L + NK+D +P E R+ + + + +SA
Sbjct: 289 DISRDENMKHVDSVLEEIGANEV---PTLTIFNKIDLLPTAEPRIDRDVNGNPFRVWLSA 345
Query: 422 TRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLL 481
G G+ LK+ + +++ + + + + + G L +H AV + R D+ A +
Sbjct: 346 RDGQGIDLLKQAIAELLAEDVFNETLYLSSKY-GRLRAMLFEHGAVKSERFDE--AGRFV 402
Query: 482 LDV 484
LDV
Sbjct: 403 LDV 405
>gi|54113821|gb|AAV29544.1| NT02FT0764 [synthetic construct]
Length = 435
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 171/313 (54%), Gaps = 28/313 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F G G +E++K + D + V L Q++ ++ + V DR ++++I
Sbjct: 56 DIKYFCGMGKIEMIKN--KRDELEADLVVFNHPLTPSQERNIEKFLECRVMDRTRLILEI 113
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVL 246
F AKT E +LQ+ +A+L Y TR ++ T++ KG L+ R ++
Sbjct: 114 FSLRAKTYEGKLQVELAQLNYQSTR--LVKGWTHLERQKGGIGVRGGPGETQLEIDRRLI 171
Query: 247 MEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRN 306
+R +++ + L K+K R++ R+ +++ PT++ VGYTN GK+TL +T+ D L ++
Sbjct: 172 RQRIKQIAQKLEKVKHHRDLSRSSRKKNNIPTISFVGYTNAGKSTLFNKITNADVLA-KD 230
Query: 307 QLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
QLFATLD T + ++P +++ DT+GFI N+P L+E F TLE+A+ +D+++HV+D
Sbjct: 231 QLFATLDPTLRKVIVPKLGEVIFSDTVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDY 290
Query: 367 SNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA---VPPGERVTEEYD------L 417
++ D+ + V++ L + + +K + V NK+D + P E+ D +
Sbjct: 291 ADEDHKSYIEQVEKVLSEIGIADK---ETICVYNKIDKLENIKPSFVPLEDSDSSVVSRV 347
Query: 418 LISATRGTGLAQL 430
+SA G GL +
Sbjct: 348 YLSAQNGDGLVEF 360
>gi|56707756|ref|YP_169652.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670227|ref|YP_666784.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis FSC198]
gi|254370260|ref|ZP_04986265.1| protease [Francisella tularensis subsp. tularensis FSC033]
gi|254874569|ref|ZP_05247279.1| protease [Francisella tularensis subsp. tularensis MA00-2987]
gi|379717006|ref|YP_005305342.1| GTP-binding protein HflX [Francisella tularensis subsp. tularensis
TIGB03]
gi|379725610|ref|YP_005317796.1| GTP-binding protein HflX [Francisella tularensis subsp. tularensis
TI0902]
gi|385794392|ref|YP_005830798.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis NE061598]
gi|421755261|ref|ZP_16192211.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 80700075]
gi|56604248|emb|CAG45264.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320560|emb|CAL08647.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis FSC198]
gi|151568503|gb|EDN34157.1| protease [Francisella tularensis subsp. tularensis FSC033]
gi|254840568|gb|EET19004.1| protease [Francisella tularensis subsp. tularensis MA00-2987]
gi|282158927|gb|ADA78318.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis NE061598]
gi|377827059|gb|AFB80307.1| GTP-binding protein HflX [Francisella tularensis subsp. tularensis
TI0902]
gi|377828683|gb|AFB78762.1| GTP-binding protein HflX [Francisella tularensis subsp. tularensis
TIGB03]
gi|409088596|gb|EKM88660.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 80700075]
Length = 435
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 171/313 (54%), Gaps = 28/313 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F G G +E++K + D + V L Q++ ++ + V DR ++++I
Sbjct: 56 DIKYFCGMGKIEMIKN--KRDELEADLVVFNHPLTPSQERNIEKFLECRVMDRTRLILEI 113
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVL 246
F AKT E +LQ+ +A+L Y TR ++ T++ KG L+ R ++
Sbjct: 114 FSLRAKTYEGKLQVELAQLNYQSTR--LVKGWTHLERQKGGIGVRGGPGETQLEIDRRLI 171
Query: 247 MEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRN 306
+R +++ + L K+K R++ R+ +++ PT++ VGYTN GK+TL +T+ D L ++
Sbjct: 172 RQRIKQIAQKLEKVKHHRDLSRSSRKKNNIPTISFVGYTNAGKSTLFNKITNADVLA-KD 230
Query: 307 QLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
QLFATLD T + ++P +++ DT+GFI N+P L+E F TLE+A+ +D+++HV+D
Sbjct: 231 QLFATLDPTLRKVIVPKLGEVIFSDTVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDY 290
Query: 367 SNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA---VPPGERVTEEYD------L 417
++ D+ + V++ L + + +K + V NK+D + P E+ D +
Sbjct: 291 ADEDHKSYIEQVEKVLSEIGIADK---ETICVYNKIDKLENIKPSFVPLEDSDSSVVSRV 347
Query: 418 LISATRGTGLAQL 430
+SA G GL +
Sbjct: 348 YLSAQNGDGLVEF 360
>gi|118497641|ref|YP_898691.1| protease, GTP-binding subunit [Francisella novicida U112]
gi|118423547|gb|ABK89937.1| protease, GTP-binding subunit [Francisella novicida U112]
Length = 436
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 171/313 (54%), Gaps = 28/313 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F G G +E++K + D + V L Q++ ++ + V DR ++++I
Sbjct: 57 DIKYFCGMGKIEMIKN--KRDELEADLVVFNHPLTPSQERNIEKFLECRVMDRTRLILEI 114
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVL 246
F AKT E +LQ+ +A+L Y TR ++ T++ KG L+ R ++
Sbjct: 115 FSLRAKTYEGKLQVELAQLNYQSTR--LVKGWTHLERQKGGIGVRGGPGETQLEIDRRLI 172
Query: 247 MEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRN 306
+R +++ + L K+K R++ R+ +++ PT++ VGYTN GK+TL +T+ D L ++
Sbjct: 173 RQRIKQITQKLEKVKHHRDLSRSSRKKNNIPTISFVGYTNAGKSTLFNKITNADVLA-KD 231
Query: 307 QLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
QLFATLD T + ++P +++ DT+GFI N+P L+E F TLE+A+ +D+++HV+D
Sbjct: 232 QLFATLDPTLRKVIVPKLGEVIFSDTVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDY 291
Query: 367 SNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA---VPPGERVTEEYD------L 417
++ D+ + V++ L + + +K + V NK+D + P E+ D +
Sbjct: 292 ADEDHKSYIEQVEKVLSEIGIADK---ETICVYNKIDKLENIKPSFVPLEDSDSSVVARV 348
Query: 418 LISATRGTGLAQL 430
+SA G GL +
Sbjct: 349 YLSAQNGDGLVEF 361
>gi|268609534|ref|ZP_06143261.1| small GTP-binding protein [Ruminococcus flavefaciens FD-1]
Length = 415
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 173/327 (52%), Gaps = 17/327 (5%)
Query: 118 VSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD-VLKLHQQ 176
++S VV S I S+D + G G LE L+ Q+ + A V D L Q
Sbjct: 35 LASTANAEVVGSIIQKRPSYDPATCMGAGRLEELREQLEA---LDAELVIFDHELTGVQV 91
Query: 177 KMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN----- 231
+ ++ L V V DR +++ IF A+T+E +LQ+ +A+ Y R + A +
Sbjct: 92 RNIEQLLDVRVIDRTTLILDIFAQRARTKEGKLQVELAQQKYRLPRLTGMGTALSRLGGG 151
Query: 232 ---MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCG 288
+ L++ + + +R L+ L +LK R+ R+++++ A+VGYTN G
Sbjct: 152 IGTRGPGETKLETDKRHIRKRISYLEAELEELKKHRDFSRSRRKKDGVLCAAIVGYTNVG 211
Query: 289 KTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFK 348
K+TL+ ALTD L N+LFATLD+T+ LP+ ++ +DT+G I +P L+E FK
Sbjct: 212 KSTLLNALTDAGVLA-ENKLFATLDITSRSIELPDGRSVMLIDTVGLIRRLPHNLVEAFK 270
Query: 349 VTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG 408
TLE+A ADII++V D+++P+ +Q + L L + + + V+ NK DA P
Sbjct: 271 STLEEAAAADIILNVQDLTSPEIKEQAEVTAHLLSELGCDG--IPQIFVM-NKADAAPFT 327
Query: 409 ERVTEEYD-LLISATRGTGLAQLKEKV 434
+ V E+ + +LISA TG +L E +
Sbjct: 328 DTVFEDGNTVLISAKEQTGFDRLLECI 354
>gi|33241830|ref|NP_876771.1| GTP binding protein hflX [Chlamydophila pneumoniae TW-183]
gi|33236339|gb|AAP98428.1| GTP binding protein hflX [Chlamydophila pneumoniae TW-183]
Length = 472
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 173/343 (50%), Gaps = 26/343 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ + V DR ++++IF + A T EA +Q+ +A+ YL R + +
Sbjct: 116 QQRNLEKRLGLVVLDRTELILEIFSSRALTAEANIQVQLAQARYLLPRLKRLWGHLSRQK 175
Query: 227 EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
+ KG ++ R ++ ER KL L + QR R K R+ PT A++
Sbjct: 176 SGGGSGGFVKGEGEKQIELDRRMVRERIHKLSAQLKAVIKQRAERRKVKSRRGIPTFALI 235
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ LT D+ V ++LFATLD T + +LP +L DT+GFI +P T
Sbjct: 236 GYTNSGKSTLLNLLTAADTYV-EDKLFATLDPKTRKCVLPGGRHVLLTDTVGFIRKLPHT 294
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+ FK TLE A D+++HVVD S+P L+ Q + Q L++E+ ++ V NKV
Sbjct: 295 LVAAFKSTLEAAFHEDVLLHVVDASHPLALEHVQTTYDLFQELKIEKP---RIITVLNKV 351
Query: 403 DAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSE 457
D +P G R+ +LISA G G+ L + ++I + K++ + + +E
Sbjct: 352 DRLPQGSIPMKLRLLSPLPVLISAKTGEGIQNLLSLMTEIIQE----KSLHVTLNFPYTE 407
Query: 458 YQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFIS 500
Y + + + L++D + + KF+ FIS
Sbjct: 408 YGKFTELCDAGVVASSRYQEDFLVVDAYLPKELQKKFR-PFIS 449
>gi|387886915|ref|YP_006317214.1| protease, GTP-binding subunit [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386871731|gb|AFJ43738.1| protease, GTP-binding subunit [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 435
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 160/279 (57%), Gaps = 19/279 (6%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F G G +E++K + D + V L Q++ ++ + + DR ++++I
Sbjct: 56 DIKYFCGMGKMEMIKN--KRDELEADLVVFNHPLSPSQERNIEKFLECKIMDRTRLILEI 113
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVL 246
F AKT E +LQ+ +A+L Y TR ++ T++ KG L+ R ++
Sbjct: 114 FSLRAKTHEGKLQVELAQLNYQSTR--LVKGWTHLERQKGGIGVRGGPGETQLEIDRRLI 171
Query: 247 MEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRN 306
+R +++ + L K+K R++ R+ +++ PT++ VGYTN GK+TL +T D L ++
Sbjct: 172 RQRIKQITQKLEKVKHHRDLSRSSRKKNNIPTISFVGYTNAGKSTLFNKITKADVLA-KD 230
Query: 307 QLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
QLFATLD T + ++P +++ DT+GFI N+P L+E F TLE+A+ +D+++HV+D
Sbjct: 231 QLFATLDPTLRKVIVPKLGEVIFSDTVGFIKNLPHDLVEAFHATLEEAIESDLLVHVIDY 290
Query: 367 SNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV 405
++ DY + V++ L+ + + +K ++ V NK+D +
Sbjct: 291 ADEDYKSYIEQVEKVLKEIGIVDK---EMICVYNKIDKI 326
>gi|406574372|ref|ZP_11050105.1| GTP-binding protein HflX [Janibacter hoylei PVAS-1]
gi|404556272|gb|EKA61741.1| GTP-binding protein HflX [Janibacter hoylei PVAS-1]
Length = 499
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 177/357 (49%), Gaps = 33/357 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+ + + D ++ G G L+ V + T V D L Q
Sbjct: 105 AALAETAGSEVLAGVLQRRQNPDPGTYLGSGKALELRDIVVAEGADT--VVCDDELSPSQ 162
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI- 234
++ L+D+ +V V DR +++ IF HA +RE R Q+ +A+L YL R R ++ +
Sbjct: 163 RRALEDVVKVKVIDRTALILDIFAQHATSREGRAQVELAQLTYLLPRLRGWGESMSRQAG 222
Query: 235 ----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
TK LD +R + R KLK+ + +K R+ R+ ++ P+
Sbjct: 223 GQAAGGQGMGSRGPGETKIELDRRR--INSRIAKLKRDIAGMKTHRDTSRSSRRHNGTPS 280
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
V + GYTN GK+TL+ LT LV NQLFATLD T + DT+GF+ +
Sbjct: 281 VVIAGYTNAGKSTLLNRLTHAGVLVD-NQLFATLDTTVRRSETADGREFTLADTVGFVRH 339
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+P L+E F+ TLE+ AD+++HVVD S+PD Q V L ++ + ++ V+V+
Sbjct: 340 LPEQLVEAFRSTLEEVGDADLLLHVVDGSHPDPEGQISAVRSVLADVDATD--VKEVVVI 397
Query: 399 GNKVDAVPPG--ERV--TEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
NK DA P +R+ E Y + +SA G G+ +L D++ + R +I + V
Sbjct: 398 -NKADAADPEVVDRILRNERYSVAVSARTGQGIPEL----LDLVAEELPRPDIDVEV 449
>gi|187931478|ref|YP_001891462.1| protease, GTP-binding subunit [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187712387|gb|ACD30684.1| protease, GTP-binding subunit [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 436
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 171/313 (54%), Gaps = 28/313 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F G G +E++K + D + V L Q++ ++ + V DR ++++I
Sbjct: 57 DIKYFCGMGKIEMIKN--KRDELEADLVVFNHPLTPSQERNIEKFLECRVMDRTRLILEI 114
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVL 246
F AKT E +LQ+ +A+L Y TR ++ T++ KG L+ R ++
Sbjct: 115 FSLRAKTYEGKLQVELAQLNYQSTR--LVKGWTHLERQKGGIGVRGGSGETQLEIDRRLI 172
Query: 247 MEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRN 306
+R +++ + L K+K R++ R+ +++ PT++ VGYTN GK+TL +T+ D L ++
Sbjct: 173 RQRIKQIAQKLEKVKHHRDLSRSSRKKNNIPTISFVGYTNAGKSTLFNKITNADVLA-KD 231
Query: 307 QLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
QLFATLD T + ++P +++ DT+GFI N+P L+E F TLE+A+ +D+++HV+D
Sbjct: 232 QLFATLDPTLRKVIVPKLGEVIFSDTVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDY 291
Query: 367 SNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA---VPPGERVTEEYD------L 417
++ D+ + V++ L + + +K + V NK+D + P E+ D +
Sbjct: 292 ADEDHKSYIEQVEKVLSEIGIADK---ETICVYNKIDKLENIKPSFVPLEDSDSSVVSRV 348
Query: 418 LISATRGTGLAQL 430
+SA G GL +
Sbjct: 349 YLSAQNGDGLVEF 361
>gi|15643293|ref|NP_228337.1| hypothetical protein TM0527 [Thermotoga maritima MSB8]
gi|418045300|ref|ZP_12683396.1| GTP-binding proten HflX [Thermotoga maritima MSB8]
gi|4981040|gb|AAD35612.1|AE001728_13 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351678382|gb|EHA61529.1| GTP-binding proten HflX [Thermotoga maritima MSB8]
Length = 406
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 180/349 (51%), Gaps = 37/349 (10%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD- 169
L E K L ++ G VV+ D ++ GKG L+ LK V A V VD
Sbjct: 16 LEEMKGLCKTL-GVEVVEWLWQKRAKPDPATYLGKGKLQKLKEVVEF---CEADLVVVDD 71
Query: 170 VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY------ 223
+ Q K +Q V V DR ++++IF HA + E +LQ+ +A L Y R
Sbjct: 72 EITPVQYKNMQSELNVDVLDRTQVILEIFARHATSEEGKLQVEMASLLYELPRLVGKGEE 131
Query: 224 --RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
R + L+ R + R +L+K L +++ +R R ++ +K P V++
Sbjct: 132 LSRLGGGIGTRGPGEPLLEVLRRHIKNRIAQLRKRLKEIEQERNTQRKQRLEKKIPHVSI 191
Query: 282 VGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPT 341
VGYTN GK+TL+K LTD D V ++LFATL+ T L + IL DT+GFI +P
Sbjct: 192 VGYTNAGKSTLLKVLTDSDVYVA-DKLFATLEPVTRRLKLKSGRVILVSDTVGFIRKLPH 250
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV------ 395
T++ FK TLE+ +D++IH+VD S+P YL++K ++ EK+LE +
Sbjct: 251 TIVSAFKATLEEIKYSDVLIHLVDASDP-YLEEK---------MKASEKVLEEIGADKIP 300
Query: 396 -LVVGNKVDAVPPGERVTE---EYD--LLISATRGTGLAQLKEKVQDMI 438
++V NK+D P ER+ +Y L ISA + GL QL ++++++I
Sbjct: 301 RILVFNKIDLC-PRERIETLKWKYPEALFISAEKRIGLDQLLDRLEEVI 348
>gi|403251208|ref|ZP_10917560.1| GTPase [actinobacterium SCGC AAA027-L06]
gi|402915463|gb|EJX36434.1| GTPase [actinobacterium SCGC AAA027-L06]
Length = 483
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 181/345 (52%), Gaps = 31/345 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G +V+D+ I D +F G G + +++ V T + L Q
Sbjct: 97 AALAETAGSQVMDALIQRRDKPDPATFIGSGKVTEVRQAVVATGADTVICDGE--LSPAQ 154
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN---- 231
+ L+ +V V DR +++ IF HAK+RE + Q+ +A++ Y+ R R ++ +
Sbjct: 155 LRTLEQKVKVKVVDRTALILDIFAQHAKSREGKAQVELAQMSYMLPRLRGWGESLSRQSG 214
Query: 232 -------MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGY 284
+ +++ R + ++ KL++ + ++K R++ RN++++ P+VA+ GY
Sbjct: 215 GTGGIGGRGPGETKIETDRRRINDKMSKLRREIKEMKISRDIKRNERRKNNIPSVAIAGY 274
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVT-----THEGMLPNRLRILYVDTIGFISNI 339
TN GK++L+ LT D LV N LFATLD T +H+G + +VDT+GF+ ++
Sbjct: 275 TNAGKSSLLNRLTGVDVLV-ENALFATLDPTVRKTQSHDGRV-----YTFVDTVGFVRHL 328
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
P L+E FK TLE+ +D+I+HVVD S+PD ++Q + V + + + E ILE + +
Sbjct: 329 PHQLVEAFKSTLEEVSQSDLIVHVVDGSHPDPMEQIRAVRQVINEIGGGE-ILEIIAI-- 385
Query: 400 NKVDAVPPGERV----TEEYDLLISATRGTGLAQLKEKVQDMILK 440
NK D P + TE ISA G G+ L + ++ + K
Sbjct: 386 NKADIAAPEVLMELLRTESNAYAISARTGYGVPTLVKAIESALPK 430
>gi|359767877|ref|ZP_09271659.1| GTP-binding protein HflX [Gordonia polyisoprenivorans NBRC 16320]
gi|359314793|dbj|GAB24492.1| GTP-binding protein HflX [Gordonia polyisoprenivorans NBRC 16320]
Length = 503
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 181/355 (50%), Gaps = 29/355 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+D+ I + D ++ G G E L+ V T + L Q
Sbjct: 104 AALAETAGSAVLDAVIQRRNAPDPGTYIGSGKAEELREIVLATGADT--VICDGELTPGQ 161
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA------ 229
L+ + +V V DR +++ IF HA +RE + Q+++A++ Y+ R R ++
Sbjct: 162 LTALEKVVKVKVIDRTALILDIFAQHATSREGKAQVSLAQMEYMMPRLRGWGESMSRQAG 221
Query: 230 --TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
N G +++ R + ER KL++ + +K R R+ + R P++
Sbjct: 222 GRAGSNGGVGLRGPGETKIETDRRRIRERMAKLRREIRDMKKARVTKRSARSRSAVPSLT 281
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
V GYTN GK++L+ A+T LV ++ LFATLD TT L + +++ DT+GF+ ++P
Sbjct: 282 VAGYTNAGKSSLVNAMTGSGMLV-QDALFATLDPTTRRATLDDGREVVFTDTVGFVRHLP 340
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKI-LEHVLVVG 399
T L+E F+ TLE+ + AD+++HVVD S+ +Q V + + EE + L+V
Sbjct: 341 TQLVEAFRSTLEEVVDADLLLHVVDGSDEFPAEQIAAVRRVINEVVAEEGVSAPPELLVI 400
Query: 400 NKVDAVPPGERVTE-----EYDLLISATRGTGLAQLKEKVQDMILKATGRKNITM 449
NK+D++ R+TE + +SA G GL L ++V+D + GR ++ +
Sbjct: 401 NKIDSI-DHTRMTELRAMAPDAVFVSARTGEGLPALFDRVRDFV----GRTDVEL 450
>gi|304386274|ref|ZP_07368607.1| GTP-binding protein HflX [Pediococcus acidilactici DSM 20284]
gi|304327631|gb|EFL94858.1| GTP-binding protein HflX [Pediococcus acidilactici DSM 20284]
Length = 327
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 152/284 (53%), Gaps = 23/284 (8%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D+ +AE K+L S+ RV+D L + ++FGKG +E L QV AR V
Sbjct: 23 DYAMAELKSLASA-NHMRVMDQLTQKLERPNAATYFGKGKIEELT-QV-AAAREVETLVV 79
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRT-- 225
D L Q L+ Q+ V DR ++++IF A+++EARLQ+ +A+L Y R RT
Sbjct: 80 NDELTPSQLSNLEKETQLRVIDRTGLILEIFANRARSKEARLQVELAKLQYQLPRLRTSA 139
Query: 226 ---IEDATNMNITKGF---------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQR 273
++ T N GF L+ R + R + + L ++ + R ++ +
Sbjct: 140 TQRLDQQTAGNTGGGFTNRGAGETKLELNRRTIRNRINHINQELKEMSTSANVQRQRRDK 199
Query: 274 QKFPTVAVVGYTNCGKTTLIKAL------TDDDSLVPRNQLFATLDVTTHEGMLPNRLRI 327
+ P+VA+VGYTN GK+T + L +D + ++ LFATLD + + P++ +
Sbjct: 200 KDIPSVALVGYTNTGKSTTMNGLISMYGRNEDKQVFEKDMLFATLDTSVRKLTFPDQKEL 259
Query: 328 LYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDY 371
+ DT+GF+SN+P L++ F+ TL +A AD+++ VVDVS+P Y
Sbjct: 260 ILSDTVGFVSNLPHQLVKAFRSTLSEAAKADLLVQVVDVSDPHY 303
>gi|225174625|ref|ZP_03728623.1| GTP-binding proten HflX [Dethiobacter alkaliphilus AHT 1]
gi|225169752|gb|EEG78548.1| GTP-binding proten HflX [Dethiobacter alkaliphilus AHT 1]
Length = 425
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 175/354 (49%), Gaps = 33/354 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
AL++ G V I D + GKG E ++ V +F D L Q
Sbjct: 29 ALLAETAGAEPVAEIIQKRQRPDSAFYVGKGKAEEIRLIVEETDAQLVLFD--DELSPSQ 86
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI- 234
++ L++ V V DR +++ IF AKT+E +LQ+ +A+L YL R T M +
Sbjct: 87 RRNLEEAVAVRVVDRTALILDIFAQRAKTKEGKLQVELAQLHYLLPRL------TGMGVQ 140
Query: 235 ---------TKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
T+G ++K R + +R LKK + ++K R + R +Q P V +
Sbjct: 141 LSRLAGGIGTRGPGETKLEVDRRRIRKRISDLKKEIEEIKKHRTLHRKARQEVPLPVVTL 200
Query: 282 VGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPT 341
VGYTN GK+TL+ ALT+ D ++LFATLD TT + LP L DT+GFI +P
Sbjct: 201 VGYTNAGKSTLLNALTNADVFA-EDKLFATLDPTTRQVELPGGSMFLLTDTVGFIQKLPH 259
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
L+ F+ TLE+ + AD+++HVVD S+P +Q V LQ L +E +VV NK
Sbjct: 260 HLVAAFRATLEEVLEADLLLHVVDTSHPQAAEQMNAVQNILQQLGAQEL---PAIVVFNK 316
Query: 402 VDAVPPG----ERVTEEYD--LLISATRGTGLAQLKEKVQDMILKATGRKNITM 449
+D +P + E+ + +SA GL L E + D + K R ++T+
Sbjct: 317 MD-MPEAHANLSALAGEWPEHVAVSAKNKVGLDTLLEAISDNLQKNHVRLDLTL 369
>gi|395763284|ref|ZP_10443953.1| GTP-binding protein [Janthinobacterium lividum PAMC 25724]
Length = 407
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 183/355 (51%), Gaps = 33/355 (9%)
Query: 108 DFMLA-ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFV 166
DF + E L+S G + + S D F G G + + V D +F
Sbjct: 14 DFAASMEELMLLSRSAGADPISTITAKRSSPDSAYFVGSGKADEIGDIVVNDGLEIVIFN 73
Query: 167 SVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI 226
L QQ+ L+ V V DR +++ IF AK+ E +LQ+ +A+L +L TR I
Sbjct: 74 HA--LSPAQQRNLEKRLNVRVLDRTSLILDIFAQRAKSHEGKLQVELAQLQHLATRL--I 129
Query: 227 EDATNMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
T++ KG L++ R ++ +R + L+ L KL QRE R + R
Sbjct: 130 RGWTHLERQKGGIGLRGPGETQLETDRRLIGDRVKALRARLEKLHKQRETQRRARGRNHT 189
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL-RILYVDTIGF 335
+V++VGYTN GK+TL A+T V +QLFATLD T+ L + ++ DT+GF
Sbjct: 190 FSVSLVGYTNAGKSTLFNAVTKAGVYVA-DQLFATLDTTSRRVYLGQEVGNVVISDTVGF 248
Query: 336 ISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV 395
+ +P L+ F+ TLE+ + AD+++HVVD ++P ++Q + V+ L L+E +H+
Sbjct: 249 VRELPHQLVAAFRATLEETIHADLLLHVVDAASPVRMEQIEQVN-----LVLKEIGADHI 303
Query: 396 --LVVGNKVDAV---PPGERVTEEYD----LLISATRGTGLAQLKEKVQDMILKA 441
++V NK+DA P ER +EY + +SA +G+GL L++ + +M KA
Sbjct: 304 PQILVWNKIDAAGLEPSVER--DEYATISRVFVSAQKGSGLDLLRDAIVEMARKA 356
>gi|395793427|ref|ZP_10472829.1| GTP-binding protein HflX [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|423713896|ref|ZP_17688156.1| GTP-binding protein HflX [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395421702|gb|EJF87938.1| GTP-binding protein HflX [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395430809|gb|EJF96838.1| GTP-binding protein HflX [Bartonella vinsonii subsp. arupensis
Pm136co]
Length = 447
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 163/289 (56%), Gaps = 16/289 (5%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
VV I++++ + FGKG ++ L + + V V V + + QQ+ L+ L++
Sbjct: 60 VVYYEAINIITPRPATLFGKGKVDALAHYI-SEYYVELVIVDYFLTPV-QQRNLEKLWKC 117
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------- 238
V DR ++++IF A+T+E LQ+ +A L Y + R + T++ +G
Sbjct: 118 KVIDRTALILEIFGDRARTKEGVLQVELAHLSY--QKSRLVRSWTHLERQRGGRGFLGGP 175
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+++ R +L E+ ++++ L + R + R K+++ P VA+VGYTN GK+TL
Sbjct: 176 GETQIEADRRLLQEKITRIQRELETVTKTRALHRAKRKKTSHPVVALVGYTNTGKSTLFN 235
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
L+ D L ++ LFATLD T + +LP+ IL DT+GFISN+PT L+ F+ TLE+
Sbjct: 236 RLSGADVLA-KDMLFATLDPTLRKVILPHGKTILLSDTVGFISNLPTHLIAAFRATLEEV 294
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+ AD+I+HV D+S+ D+ + V E L L ++ EH++ V NK+D
Sbjct: 295 VEADLILHVRDMSDFDHRAHAKDVLEVLSSLGIDIDDTEHIIEVWNKID 343
>gi|343493061|ref|ZP_08731400.1| GTPase HflX [Vibrio nigripulchritudo ATCC 27043]
gi|342826568|gb|EGU60990.1| GTPase HflX [Vibrio nigripulchritudo ATCC 27043]
Length = 429
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 179/341 (52%), Gaps = 27/341 (7%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
LAE + LV+S G V+ S S K + G+G + + + V+ +F
Sbjct: 27 LAECEMLVTSA-GVEVLQVVTGSRQSPHPKYYVGEGKAQEIAQAVKSSGAEIVIFNHS-- 83
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
L Q++ L+ LF+ V DR +++ IF A+T E +LQ+ +A+L ++ TR I T
Sbjct: 84 LSPAQERNLEHLFKCRVLDRTGLILDIFAQRARTHEGKLQVELAQLRHISTRL--IRGWT 141
Query: 231 NMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
++ KG L++ R +L +R + + + L K+ QRE R + R + PT++
Sbjct: 142 HLERQKGGIGLRGPGETQLETDRRLLRDRIKAILRRLEKVAKQREQGRRARNRAEIPTIS 201
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+VGYTN GK+TL +T+ + +QLFATLD T + L + + DT+GFI ++P
Sbjct: 202 LVGYTNAGKSTLFNRITEA-GVYAADQLFATLDPTLRKIELSDVGTAILADTVGFIRHLP 260
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
L+ FK TL++ ADI++HVVD S+ + + Q V + L+ ++ E LVV N
Sbjct: 261 HDLVAAFKATLQETQEADILLHVVDASDERFRENIQAVHDVLEEIDAHEV---PTLVVMN 317
Query: 401 KVDAVPPGERVTEEYD-------LLISATRGTGLAQLKEKV 434
K+D + G++ EYD + +SA G G+ L E +
Sbjct: 318 KIDNM-EGQQPRIEYDDEGMPQRVWVSAMEGVGIELLFEAL 357
>gi|153815053|ref|ZP_01967721.1| hypothetical protein RUMTOR_01270 [Ruminococcus torques ATCC 27756]
gi|145847621|gb|EDK24539.1| GTP-binding protein HflX [Ruminococcus torques ATCC 27756]
Length = 413
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 162/306 (52%), Gaps = 11/306 (3%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG L LK + + T + D L Q L++ + DR ++++ IF A
Sbjct: 57 TYIGKGKLTELKDLI-WETDATGIICD-DELTSAQLGNLEEELSCKIIDRTLLILDIFAA 114
Query: 201 HAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQK 252
A + E ++Q+ +A+L Y +R R + L+ R ++ ER +
Sbjct: 115 RAVSGEGKIQVELAQLRYRASRLAGLGRSLSRLGGGIGTRGPGEKKLEMDRRLIRERISR 174
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
LKK L ++ RE++R ++++ A+VGYT+ GK+++ ALT+ ++ LF+TL
Sbjct: 175 LKKELKDVEKHRELIRTQRKQSGLKVAALVGYTSAGKSSIENALTNA-GILEDAMLFSTL 233
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT +L N IL DT+GFI +P L+E FK TLE+A ADIIIHVVD SNP
Sbjct: 234 DTTTRSLVLDNTQEILVTDTVGFIRKLPHHLVEAFKSTLEEAKYADIIIHVVDASNPQMD 293
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKE 432
+Q V +TL+ L ++ + + +K+++ EY + SA G GLA+LK+
Sbjct: 294 EQMHVVYDTLRQLGAADRPVITLFNKQDKLESAGSYRDFQAEYSIPASAKTGEGLAELKK 353
Query: 433 KVQDMI 438
+ +++
Sbjct: 354 ALLEIV 359
>gi|374851271|dbj|BAL54236.1| GTP-binding protein HflX [uncultured candidate division OP1
bacterium]
gi|374857413|dbj|BAL60266.1| GTP-binding protein HflX [uncultured candidate division OP1
bacterium]
Length = 382
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 166/321 (51%), Gaps = 20/321 (6%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D F GKG E L VF D L Q + L++ Q + DR +++ I
Sbjct: 66 DPAFFIGKGKAEELHELATKSGAEVVVFN--DALTPAQARNLEERIQRKIIDRAQLIMNI 123
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI----TKG----FLDSKRMVLMER 249
F A+++EA+LQ+ +A+L YL R R +A T+G L +R + +R
Sbjct: 124 FAQRARSKEAKLQVELAQLEYLLPRLRGWAEALGQPGAGIGTRGPGETRLAQERHAIRQR 183
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
LK+ L + +R + R + ++K P +A++GYTN GK+TL++ALT ++ + ++LF
Sbjct: 184 MHTLKEQLAQAHQERAVRRKLRAKRKIPEIALIGYTNTGKSTLLRALTGAETFI-EDKLF 242
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T + LP+ ++ DT+GFI +P L+ F TLE A AD++++V+DVSNP
Sbjct: 243 ATLDPLTRQMYLPDGQLVVITDTVGFIKKLPHPLIPAFASTLETAQTADLVLNVLDVSNP 302
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE---RVTEEYDLL-----ISA 421
+ + + E L + + +L V NKVD + E R+ E L ISA
Sbjct: 303 NLFDHWRTITEVLNSI-FKNGARPPMLNVLNKVDKLHTLEDHQRLEEALSTLANSVVISA 361
Query: 422 TRGTGLAQLKEKVQDMILKAT 442
G+ +LK ++ M+ +A
Sbjct: 362 KERVGIEELKGRIGRMLTRAA 382
>gi|148653665|ref|YP_001280758.1| HSR1-like GTP-binding protein [Psychrobacter sp. PRwf-1]
gi|148572749|gb|ABQ94808.1| GTP-binding protein, HSR1-related protein [Psychrobacter sp.
PRwf-1]
Length = 481
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 176/337 (52%), Gaps = 34/337 (10%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F G G + + QV+ A + + L Q++ L+ L Q V DR +++ I
Sbjct: 55 DAKYFIGSGKAQEIAEQVQ--ALEADIVIFNHSLTPSQERNLETLLQCRVLDRTGLILDI 112
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLM 247
F A+T E +LQ+ +A+L +L TR + T++ KG L++ R +L
Sbjct: 113 FAQRARTYEGKLQVELAQLNHLATRL--VRGWTHLERQKGGIGLRGPGETQLETDRRLLQ 170
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
R +LK L+K+K R R K+Q+ T+++VGYTN GK++L L D+D + +Q
Sbjct: 171 IRVSQLKARLDKVKQTRAQGRAKRQKSDVLTISLVGYTNAGKSSLFNRLVDED-IYAADQ 229
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T R++ VDT+GF+ ++P L+E F TLE+ + AD+++HV+D S
Sbjct: 230 LFATLDPTLRRMDWQGVGRVVLVDTVGFVRHLPHELVESFHATLEETLEADLLLHVIDSS 289
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD-------LLIS 420
+PD +Q + V E L E++ + VL V NK+D GE Y + +S
Sbjct: 290 SPDMHEQIKAVKEVLS--EIDNHV--PVLNVYNKIDIT--GEPAQINYSGPGVPSRVYVS 343
Query: 421 ATRGTGLAQLKEKVQDMILKATGRKN---ITMRVRSG 454
A G++ L VQ ++ TG+ N IT+ +G
Sbjct: 344 AKADLGMSMLHTAVQQLL---TGKLNTFEITLPFNAG 377
>gi|195536342|ref|ZP_03079349.1| GTPase of unknown function family protein, putative [Francisella
novicida FTE]
gi|194372819|gb|EDX27530.1| GTPase of unknown function family protein, putative [Francisella
tularensis subsp. novicida FTE]
Length = 403
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 171/313 (54%), Gaps = 28/313 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F G G +E++K + D + V L Q++ ++ + V DR ++++I
Sbjct: 24 DIKYFCGMGKIEMIKN--KRDELEADLVVFNHPLTPSQERNIEKFLECRVMDRTRLILEI 81
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVL 246
F AKT E +LQ+ +A+L Y TR ++ T++ KG L+ R ++
Sbjct: 82 FSLRAKTYEGKLQVELAQLNYQSTR--LVKGWTHLERQKGGIGVRGGPGETQLEIDRRLI 139
Query: 247 MEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRN 306
+R +++ + L K+K R++ R+ +++ PT++ VGYTN GK+TL +T+ D L ++
Sbjct: 140 RQRIKQITQKLEKVKHHRDLSRSSRKKNNIPTISFVGYTNAGKSTLFNKITNADVLA-KD 198
Query: 307 QLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
QLFATLD T + ++P +++ DT+GFI N+P L+E F TLE+A+ +D+++HV+D
Sbjct: 199 QLFATLDPTLRKVIVPKLGEVIFSDTVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDY 258
Query: 367 SNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA---VPPGERVTEEYD------L 417
++ D+ + V++ L + + +K + V NK+D + P E+ D +
Sbjct: 259 ADEDHKSYIEQVEKVLSEIGIADK---ETICVYNKIDKLENIKPSFVPLEDSDSSVVARV 315
Query: 418 LISATRGTGLAQL 430
+SA G GL +
Sbjct: 316 YLSAQNGDGLVEF 328
>gi|456355449|dbj|BAM89894.1| putative GTP-binding protein, HflX [Agromonas oligotrophica S58]
Length = 413
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 184/364 (50%), Gaps = 29/364 (7%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQ 184
V ++ + + ++ GKG ++ + + A V +D L QQ+ L+ +
Sbjct: 22 VAEAILAPIQQIRPATYLGKGKVDEIGGVI---ASHGVELVVMDCALSPIQQRNLEKAWN 78
Query: 185 VPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF------ 238
V DR ++++IF AKT+E LQ+ +A L Y R R + T++ +G
Sbjct: 79 TKVLDRTGLILEIFGRRAKTKEGSLQVELAHLNY--QRSRLVRSWTHLERQRGGFGFMGG 136
Query: 239 -----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLI 293
+++ R ++ +R +L+ + K++ R + R +QR + VA+VGYTN GK+TL
Sbjct: 137 PGETQIEADRRLIGDRITRLENEIKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLF 196
Query: 294 KALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLED 353
LT D + + LFATLD T LP+ + + DT+GFISN+PT L+ F+ TLE+
Sbjct: 197 NRLTRAD-VQAADMLFATLDPTLRAIALPHGGKAMLSDTVGFISNLPTQLVAAFRATLEE 255
Query: 354 AMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD---------- 403
+ AD+I+HV D+S+ D Q+ V+ L L ++ + + ++ V NK+D
Sbjct: 256 VLEADVILHVRDMSHEDAEAQQHDVELVLSQLGIDPEATDTIIEVWNKIDRLDEAARENL 315
Query: 404 AVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMK 463
A R E L+SA G G+ L + ++D + A ++T+ + G+ WL +
Sbjct: 316 ANIASRRPPERPCFLVSAETGEGVEALLQAIEDRLAAARTTLDLTIDA-ADGAGISWLHR 374
Query: 464 HTAV 467
+ V
Sbjct: 375 NAEV 378
>gi|222099117|ref|YP_002533685.1| GTP-binding protein HflX [Thermotoga neapolitana DSM 4359]
gi|221571507|gb|ACM22319.1| GTP-binding protein HflX [Thermotoga neapolitana DSM 4359]
Length = 420
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 180/341 (52%), Gaps = 34/341 (9%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVD-VLKLHQQKMLQDLFQVPVFDRYMIVIQ 196
D ++ G+G L+ LK V A V VD + Q K +++ + V DR ++++
Sbjct: 56 DPATYLGRGKLQKLKEIVEF---CEADLVVVDDEITPVQSKNMREYLETEVLDRTQVILE 112
Query: 197 IFKAHAKTREARLQIAIA----ELPYLWTR----YRTIEDATNMNITKGFLDSKRMVLME 248
IF HA + E +LQ+ +A ELP L R R + L+ R +
Sbjct: 113 IFARHATSEEGKLQVEMASLLYELPRLVGRGEELSRLGGGIGTRGPGEPLLEVLRRHIKN 172
Query: 249 REQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQL 308
R +L+K L +++ +RE+ R ++ +K P V++VGYTN GK+TL+K+LT+ D + ++L
Sbjct: 173 RISQLRKRLKEIEKEREVQRKQRLEKKIPHVSIVGYTNAGKSTLLKSLTESDVYIA-DKL 231
Query: 309 FATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSN 368
FATL+ T L + IL DT+GFI +P T++ FK TLE+ +D++IH+VD S+
Sbjct: 232 FATLEPVTRRLKLKSGKIILVSDTVGFIRKLPHTIVSAFKATLEEVKYSDVLIHLVDASD 291
Query: 369 PDYLQQKQHVDETLQHLELEEKILEHV-------LVVGNKVDAVPPG--ERVTEEYD--L 417
P Y ++K EK+LE + ++V NK+D P E + +Y L
Sbjct: 292 P-YAEEKMRAS---------EKVLEEIGADRIPRILVFNKIDLCPEDRIEALKWKYPEAL 341
Query: 418 LISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEY 458
ISA + GL +L EK+++++ + ++ I + + G Y
Sbjct: 342 FISAEKKIGLDRLLEKLEEVLSQRDVQETIEVPIEKIGLVY 382
>gi|406592092|ref|YP_006739272.1| GTP-binding proten HflX [Chlamydia psittaci CP3]
gi|405787964|gb|AFS26707.1| GTP-binding proten HflX [Chlamydia psittaci CP3]
Length = 462
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 153/282 (54%), Gaps = 22/282 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ + V DR ++++IF A T EA LQ+ +A YL R + +
Sbjct: 113 QQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLPRLKRMWGHLSRQK 172
Query: 227 -EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
+ KG ++ R ++ ER KL L ++ QR+ R K+++ P+ A+
Sbjct: 173 SGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTLDLKSVEKQRKERRKAKEKRGIPSFAL 232
Query: 282 VGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPT 341
+GYTN GK+TL+ LT ++ V ++LFATLD T +LP+ R+L DT+GFI +P
Sbjct: 233 IGYTNSGKSTLLNLLTSAETYV-EDKLFATLDPKTRRCVLPSGQRVLVTDTVGFIRKLPH 291
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
TL+ FK TLE A+ D+++HVVD S+P + + E L+ L ++ ++ V NK
Sbjct: 292 TLVAAFKSTLEAALHEDVLLHVVDASHPLAFEHIETTKEILKELGVDHP---KIITVLNK 348
Query: 402 VDAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMI 438
+DA+P G+ R+ +LISA G G+ L E + D+I
Sbjct: 349 IDALPHGKAFTKLRLLSPRAVLISAKTGEGIQNLLEAMTDVI 390
>gi|269121346|ref|YP_003309523.1| GTP-binding proten HflX [Sebaldella termitidis ATCC 33386]
gi|268615224|gb|ACZ09592.1| GTP-binding proten HflX [Sebaldella termitidis ATCC 33386]
Length = 419
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 177/360 (49%), Gaps = 23/360 (6%)
Query: 98 GKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRG 157
G K+ D+M+ E + LV + V + + +L + G G +E LK+ +
Sbjct: 9 GIKINNQKDFDYMMDELENLVYA-NNINVSERLVQNLDKIHAGHYLGSGKIEELKKII-A 66
Query: 158 DARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELP 217
+ V V + D L +Q + L++ + V DR +++ IF AKT+EA+LQ+ IA L
Sbjct: 67 ETDVDMVIFN-DELSPYQIRNLEEFLDIEVIDRTQLILDIFYKRAKTKEAKLQVEIARLQ 125
Query: 218 YLWTRYRTIED-----------ATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREM 266
Y R RT D +N + L+ + R Q L K L + +R++
Sbjct: 126 YELPRMRTSRDEKLDQQSGASGTSNRGAGETKLEINYRTIKHRIQLLNKELENVIKERDI 185
Query: 267 MRNKKQRQKFPTVAVVGYTNCGKTTLIKALTD------DDSLVPRNQLFATLDVTTHEGM 320
R ++++ + V++VGYTN GK+T++ + + ++ LFATL+ +
Sbjct: 186 QRKQRKKNQISVVSLVGYTNAGKSTIMNKFVNKFNKGESKEVFEKDMLFATLETSVRNIT 245
Query: 321 LPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDE 380
LP+R + L DT+GF+SN+P L++ F+ TLE+ AD++IHVVD S+ Y Q D
Sbjct: 246 LPDRKKFLLTDTVGFVSNLPHHLIKAFRSTLEEVREADLLIHVVDYSSIHYKNMMQTTDS 305
Query: 381 TLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
TL + +++ V+ V NK D + + ISA GL L EK+ D I +
Sbjct: 306 TLAEVGVKDI---PVIYVYNKADLTEKEIPADDGDSIYISAKNDIGLDLLLEKIYDKIFQ 362
>gi|339008302|ref|ZP_08640875.1| putative GTP-binding protein HflX [Brevibacillus laterosporus LMG
15441]
gi|421874334|ref|ZP_16305940.1| GTP-binding protein HflX [Brevibacillus laterosporus GI-9]
gi|338774102|gb|EGP33632.1| putative GTP-binding protein HflX [Brevibacillus laterosporus LMG
15441]
gi|372456765|emb|CCF15489.1| GTP-binding protein HflX [Brevibacillus laterosporus GI-9]
Length = 429
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 164/302 (54%), Gaps = 21/302 (6%)
Query: 163 AVFVSVDV------LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAEL 216
AV + VDV L Q + L+ LF+ V DR +++ IF + A +RE ++Q+ +A+
Sbjct: 72 AVSLDVDVVIFNDELSASQNRNLEALFECRVIDRTQLILDIFASRANSREGKIQVELAQY 131
Query: 217 PYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMR 268
YL R R + L++ R + R +LK+ L+ + R++ R
Sbjct: 132 SYLLPRLAGQGNQMSRLGGGIGTRGPGETKLETDRRHIRRRISELKQQLDDIVRTRQLHR 191
Query: 269 NKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRIL 328
++++ +A+VGYTN GK+TL+ LT D+L ++LFATLD TT + LP+ +L
Sbjct: 192 ERRKKNHVYQIALVGYTNAGKSTLLNNLTKADTL-QEDKLFATLDPTTRQLALPSGKEVL 250
Query: 329 YVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELE 388
DT+GFI ++PT L+ F+ TLE AD+I+HVVD S+PD+ + VD+ L+ LE E
Sbjct: 251 LTDTVGFIQDLPTALIAAFRSTLEGVQEADLILHVVDCSHPDFEVHMEVVDQVLKDLEAE 310
Query: 389 EKILEHVLVVGNKVDAVPPGERVTEEYDLL-ISATRGTGLAQLKEKVQDMILKATGRKNI 447
LVV NK D + + + D + ISA L +L +V+ ++L TG +++
Sbjct: 311 GI---PRLVVYNKADLLDTDKYLPHPEDSIQISALSEQDLQRLLNRVEGIVL--TGYESV 365
Query: 448 TM 449
+
Sbjct: 366 EL 367
>gi|213964461|ref|ZP_03392661.1| GTPase [Corynebacterium amycolatum SK46]
gi|213952654|gb|EEB64036.1| GTPase [Corynebacterium amycolatum SK46]
Length = 535
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 169/321 (52%), Gaps = 29/321 (9%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQ 196
D ++ G G L L+ V A A V D L Q L+D V DR M+++
Sbjct: 141 DPGTYVGSGKLNELRDIV---ASTGADTVICDGELSPGQLVALEDRLDAKVIDRTMLILD 197
Query: 197 IFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------------L 239
IF HAK++E + Q+++A++ YL+TR R N++ G +
Sbjct: 198 IFAQHAKSKEGKAQVSLAQMQYLYTRLRGW--GGNLSRQAGGRAGSNGGVGLRGPGETKI 255
Query: 240 DSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDD 299
++ R L + +++K L +K RE+ R +++ P VA+VGYTN GK++L+ ALTD
Sbjct: 256 ETDRRRLRQDMARIRKELAGMKTAREIKRARRKAGHLPRVAIVGYTNAGKSSLLNALTDA 315
Query: 300 DSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADI 359
LV + LFATLD TT L + ++ DT+GF+ ++PT L+E F+ TLE+ + AD+
Sbjct: 316 GVLV-EDALFATLDPTTRRTKLRDGRTVIMTDTVGFVRHLPTQLIEAFRSTLEEVLEADV 374
Query: 360 IIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV-LVVGNKVDAVPPGERVTEEYDL- 417
I+HVVD S+P L Q + V++ + + EEK L+V NKVD + L
Sbjct: 375 IMHVVDSSDPFPLDQIKAVNKVINEIAEEEKAEIPPELLVVNKVDKADGITLAQLRHQLD 434
Query: 418 ---LISATRGTGLAQLKEKVQ 435
+SA G G+ +L+ +++
Sbjct: 435 DAVFVSARTGEGIGELETRLE 455
>gi|25028389|ref|NP_738443.1| GTP-binding protein HflX [Corynebacterium efficiens YS-314]
gi|259507446|ref|ZP_05750346.1| GTP-binding protein [Corynebacterium efficiens YS-314]
gi|23493674|dbj|BAC18643.1| putative GTP-binding protein HflX [Corynebacterium efficiens
YS-314]
gi|259164934|gb|EEW49488.1| GTP-binding protein [Corynebacterium efficiens YS-314]
Length = 535
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 171/336 (50%), Gaps = 29/336 (8%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V++S D ++ G G + LK + +A V L Q L+
Sbjct: 128 GAEVIESLYQKRDKPDPGTYIGSGKVRELKEII--EATGADTVVCDGELSPSQLVALERE 185
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF---- 238
+ V DR M+V+ IF HAK+RE + Q+A+A++ YL TR R N++ G
Sbjct: 186 LNIKVIDRTMLVLDIFAQHAKSREGKAQVALAQMEYLITRVRGW--GGNLSRQAGGRAGS 243
Query: 239 -------------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYT 285
+++ R L +L++ L+ + R + R+++ P +A+ GYT
Sbjct: 244 NGGVGLRGPGETKIEADRRRLRSDMARLRRELSGMDTARGIKRSQRSESLVPQIAIAGYT 303
Query: 286 NCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLE 345
N GK++LI A+T LV + LFATLD TT + L + +++ DT+GFI ++PT+L+E
Sbjct: 304 NAGKSSLINAMTGAGVLV-EDALFATLDPTTRKAELADGRHVVFTDTVGFIRHLPTSLVE 362
Query: 346 PFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVVGNKVD 403
FK TLE+ + AD+++HVVD S+P L+Q + V+ + + E ++VV NK+D
Sbjct: 363 AFKSTLEEVLEADLMLHVVDGSDPFPLKQIEAVNSVISDIIRTTGETPPPEIIVV-NKID 421
Query: 404 AVPPGERVTEEYDL----LISATRGTGLAQLKEKVQ 435
P + L +SA G G+ +L+ +++
Sbjct: 422 QADPLTLAELRHALDDVVFVSALTGEGIKELEARIE 457
>gi|328951761|ref|YP_004369095.1| GTP-binding proten HflX [Desulfobacca acetoxidans DSM 11109]
gi|328452085|gb|AEB07914.1| GTP-binding proten HflX [Desulfobacca acetoxidans DSM 11109]
Length = 569
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 201/384 (52%), Gaps = 22/384 (5%)
Query: 77 AQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLS 136
A+ G GT+H I + R T D +L E + L + G VV+ +
Sbjct: 175 ARAGHSGTEHDRRERAILIGVTTR-PRQTAEDSLL-ELRELART-AGLNVVEVILQQRQR 231
Query: 137 FDKKSFFGKGNL-ELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
D + G+G L EL+ R ++ DA + + D L Q + + D ++ V DR +++
Sbjct: 232 IDPRFLMGRGKLMELVIRALQMDAEL--LIFDAD-LNPSQVRSITDFTELKVIDRTQLIL 288
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATN--------MNITKGFLDSKRMVLM 247
IF A++RE +LQ+ +A+L YL R +DA + + L+ R +
Sbjct: 289 DIFAQRARSREGKLQVEMAQLKYLLPRLGKRDDALSRLTGGIGGRGPGETKLEIDRRRVR 348
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
ER +L + L++++ +R + R +QRQ P +++VGYTN GK+TL+ LT + L ++
Sbjct: 349 ERLHRLAQELDQVRDERRVRRGPRQRQGLPIISIVGYTNAGKSTLLNTLTRAEVLA-EDR 407
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T+ P ++ DT+GFI ++P LLE FK TLE+ AD+++HV+D+S
Sbjct: 408 LFATLDPTSRRLRFPKEREVIITDTVGFIRDLPKDLLEAFKATLEELEDADLLLHVIDLS 467
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP---GERVTEEYDLLISATRG 424
NP + +Q + VD L LEL +K VL V NK+D + P + + ISA G
Sbjct: 468 NPRFEEQMETVDTILASLELSDK---PVLKVFNKIDLIAPEIAQWQCRRHNGVAISALDG 524
Query: 425 TGLAQLKEKVQDMILKATGRKNIT 448
L L +++++I + R+ I+
Sbjct: 525 GTLRPLLTRMEEIIDRILPREQIS 548
>gi|376259559|ref|YP_005146279.1| GTP-binding protein HflX [Clostridium sp. BNL1100]
gi|373943553|gb|AEY64474.1| GTP-binding protein HflX [Clostridium sp. BNL1100]
Length = 621
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 178/353 (50%), Gaps = 22/353 (6%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G VVD + + D + GKG +E L + AR + + D L Q + ++++
Sbjct: 243 GAVVVDKVLQKKQTEDSAYYIGKGKIEELSLMCQ--ARDVQLLIFDDELSGAQIRNIEEM 300
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNI 234
+V V DR +++ IF A ++E +LQ+ +A+L Y R R
Sbjct: 301 IKVRVIDRTTLILDIFAQRAVSKEGKLQVELAQLKYKLPRLMGMGTQLSRLGGGIGTRGP 360
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ L+ R + R L++ L +L+ +RE +R+ + P +A+VGYTN GK+TL+
Sbjct: 361 GEKKLEVDRRHIRRRITGLEQELKQLEKRREFLRSNRTSNNTPVIAIVGYTNAGKSTLMN 420
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
+ LV ++LFATLD + + + + + +DT+GFI +P L+E FK TLE+A
Sbjct: 421 RMCGSSVLV-EDKLFATLDPSARQLTMSDGREAILIDTVGFIRKLPHDLIEAFKSTLEEA 479
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERV-TE 413
+ AD+++HVVD SN + Q V++ L+ L K + ++V NK D + G R+ T
Sbjct: 480 VHADMLLHVVDASNENVSMQISVVEKLLEELGASTK---NTILVLNKQDLIKDGRRISTV 536
Query: 414 EYDLL--ISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKH 464
Y + ISA G G+ QL EK+ + + N+ + G W+M +
Sbjct: 537 GYSAVCEISAATGDGIEQLLEKITEGFMHQLKEVNLLVPYNDG-----WVMPY 584
>gi|409406672|ref|ZP_11255134.1| GTP-binding protein [Herbaspirillum sp. GW103]
gi|386435221|gb|EIJ48046.1| GTP-binding protein [Herbaspirillum sp. GW103]
Length = 374
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 161/292 (55%), Gaps = 32/292 (10%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
QQ+ L+ + +V V DR +++ IF AK+ E ++Q+ +A+L +L TR I T++
Sbjct: 80 QQRNLERVLKVRVLDRTSLILDIFAQRAKSHEGKVQVELAQLQHLATRL--IRGWTHLER 137
Query: 235 TKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGY 284
KG L++ R +L ER + L+ L KL+ Q R + R + +V++VGY
Sbjct: 138 QKGGIGLRGPGETQLETDRRLLGERVKALRAVLAKLRRQHATQRRARGRSETFSVSLVGY 197
Query: 285 TNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
TN GK+T+ +L + NQLFATLD T+ L ++ DT+GFI +P L+
Sbjct: 198 TNAGKSTIFNSLAKA-GVYAANQLFATLDTTSRRVYLGEVGHVVISDTVGFIRELPHQLV 256
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV--LVVGNKV 402
E F+ TLE+ + AD+++HVVD ++P ++Q + V+ L L+E +HV ++V NK+
Sbjct: 257 EAFRATLEETIHADLLLHVVDAASPVRMEQIEQVN-----LVLKEIGADHVPQILVWNKI 311
Query: 403 DAVPPGERVTEEYD-------LLISATRGTGLAQLKEKVQDMI---LKATGR 444
DA G T EYD + +SA G GL L+E + + L+A GR
Sbjct: 312 DAA--GLEPTVEYDEYGKIQRVFVSAKSGAGLDLLREAIAASLKAALEARGR 361
>gi|395776008|ref|ZP_10456523.1| ATP/GTP-binding protein [Streptomyces acidiscabies 84-104]
Length = 497
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 173/325 (53%), Gaps = 23/325 (7%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V+D + D +F G G + L+ V T + L Q L+D+
Sbjct: 110 GALVLDGVVQRRDKPDPATFIGSGKAQELRDMVLESGADT--VICDGELSPGQLIALEDV 167
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI-------- 234
+V V DR +++ IF HAK+RE + Q+A+A++ Y+ R R + + +
Sbjct: 168 VKVKVIDRTALILDIFAQHAKSREGKAQVALAQMQYMLPRLRGWGQSLSRQMGGGKGGGL 227
Query: 235 -TKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGK 289
T+G ++K R + E+ K+++ + ++K RE+ R +++R K P+VA+ GYTN GK
Sbjct: 228 ATRGPGETKIETDRRRIREKMAKMRREIAEMKTGREIKRQERKRHKVPSVAIAGYTNAGK 287
Query: 290 TTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKV 349
++L+ LT LV N LFATLD T P+ VDT+GF+ ++P L+E F+
Sbjct: 288 SSLLNRLTGAGVLV-ENALFATLDPTVRRAETPSGRLYTLVDTVGFVRHLPHHLVEAFRS 346
Query: 350 TLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP-- 407
T+E+ +D+I+HVVD S+P +Q V E ++ ++ + ++V+ NK DA P
Sbjct: 347 TMEEVGESDLILHVVDGSHPAPEEQLAAVREVVR--DVGATGVPEIVVI-NKADAADPLT 403
Query: 408 GERV--TEEYDLLISATRGTGLAQL 430
+R+ E+ + +SA G G+A+L
Sbjct: 404 LQRLLRIEKRSIAVSARTGEGIAEL 428
>gi|337747176|ref|YP_004641338.1| HSR1-like GTP-binding protein [Paenibacillus mucilaginosus KNP414]
gi|379721024|ref|YP_005313155.1| HSR1-like GTP-binding protein [Paenibacillus mucilaginosus 3016]
gi|386723632|ref|YP_006189958.1| HSR1-like GTP-binding protein [Paenibacillus mucilaginosus K02]
gi|336298365|gb|AEI41468.1| GTP-binding protein, HSR1-related protein [Paenibacillus
mucilaginosus KNP414]
gi|378569696|gb|AFC30006.1| HSR1-like GTP-binding protein [Paenibacillus mucilaginosus 3016]
gi|384090757|gb|AFH62193.1| HSR1-like GTP-binding protein [Paenibacillus mucilaginosus K02]
Length = 443
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 162/310 (52%), Gaps = 15/310 (4%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
++ LAE AL + Q V+ + + D K F GKG E LK ++ + TA+F
Sbjct: 35 EYSLAELIALAETAQ-VEVLGTLTQNKEYADSKWFIGKGKAEELKEMLQENGANTAIFDQ 93
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY---- 223
L Q + L+ V + DR +++ IF A+TRE +Q+ +A+L YL R
Sbjct: 94 E--LSGAQVRNLETYLDVKIIDRTQLILDIFAQRARTREGIIQVELAQLSYLLPRLSGHG 151
Query: 224 ----RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
R + L++ R + +R +LK+ L + R + R ++++ V
Sbjct: 152 KNLSRLGGGIGTRGPGETKLETDRRHIRDRIAELKRQLAETVRHRTLHRERRKKSGVFQV 211
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL++ LT D V NQLFATLD T+ + LP+ + I+ DT+GFI N+
Sbjct: 212 ALVGYTNAGKSTLLRQLTAADVYV-ENQLFATLDPTSRQLKLPSGVEIVLTDTVGFIQNL 270
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
P L+ F+ TLE+A AD+I+HVVD S Q + VD+ L+ L K + V
Sbjct: 271 PHDLVAAFRATLEEANEADLILHVVDSSTEMMPIQMRVVDQVLEELGAHGK---DRVTVF 327
Query: 400 NKVDAVPPGE 409
NKVD + P +
Sbjct: 328 NKVDLLSPSQ 337
>gi|167748941|ref|ZP_02421068.1| hypothetical protein ANACAC_03722 [Anaerostipes caccae DSM 14662]
gi|167651563|gb|EDR95692.1| GTP-binding protein HflX [Anaerostipes caccae DSM 14662]
Length = 412
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 165/332 (49%), Gaps = 23/332 (6%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKR---QVRGDARVTAVFVSVDVLKLHQQKML 179
G V S I + ++ GKG +E ++ + D V D L Q L
Sbjct: 40 GAEVAGSIIQAREQIHSGTYVGKGKIEEIRDLLFETEADG-----IVCDDELSPAQLANL 94
Query: 180 QDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATN 231
+ + V DR ++++ IF A+T+E ++Q+ +A+L Y T+ R
Sbjct: 95 SQILDIKVMDRTLVILDIFAKRAQTKEGKIQVELAQLRYRATKLTGKGVSLSRLGGGIGT 154
Query: 232 MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTT 291
+ L+ R ++ R LK L + RE+ R ++Q+ P V +VGYTN GK+T
Sbjct: 155 RGPGEKKLEMDRRLIRTRISHLKTELAGVIKHREVQRKQRQKNHTPVVCIVGYTNAGKST 214
Query: 292 LIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTL 351
L+ TD ++ +QLFATLD TT L + +L DT+GFI +P L++ FK TL
Sbjct: 215 LLNYFTDA-GVLEEDQLFATLDPTTKSVELNSGQTVLMTDTVGFIRKLPHHLVDAFKSTL 273
Query: 352 EDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG--- 408
E+A +DII+HVVD SNP QQ + V ETL L +++ V+ NK+D
Sbjct: 274 EEAKYSDIILHVVDCSNPFMEQQMEAVYETLGQLGIKDT---PVITAFNKIDRTGKNSLL 330
Query: 409 ERVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
+ V + + ISA GTG + L ++D++ K
Sbjct: 331 KDVRADETVKISAKEGTGTSDLLRVIEDVLKK 362
>gi|307243739|ref|ZP_07525879.1| GTP-binding protein HflX [Peptostreptococcus stomatis DSM 17678]
gi|306492948|gb|EFM64961.1| GTP-binding protein HflX [Peptostreptococcus stomatis DSM 17678]
Length = 437
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 184/350 (52%), Gaps = 27/350 (7%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D ML E K LV + G VV I + S D ++ G G +E +K D+ ++ V
Sbjct: 39 DSML-ELKELVQA-AGAEVVGDLIQNRSSIDAATYMGSGKIEEIK--AYADSLNASMVVF 94
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIE 227
D L Q + ++D+ + DR +++ IF A +RE +LQ+ +A+L Y R +
Sbjct: 95 NDELSGAQIRNIEDIVGKKIIDRTTLILDIFAQRALSREGKLQVELAQLKYRLPRLYGMG 154
Query: 228 ---DATNMNI-TKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
T I T+G L+ + ++ R ++K L ++ R++ R ++ + + P V
Sbjct: 155 GQMSRTGAGIGTRGPGEQKLEKDKRHILNRAANIRKELKEVVKIRDIQRAQRSKNRVPIV 214
Query: 280 AVVGYTNCGKTTLIKALTD-------DDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDT 332
A+VGYTN GK+TL+ + D + ++ LFATLDVT + +LPN+ L VDT
Sbjct: 215 ALVGYTNAGKSTLLNEIIKTHPDYEKDKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDT 274
Query: 333 IGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKIL 392
+GF+S +P L++ FK TLE+ AD+I+H++D +N QK + L+ L+ ++K
Sbjct: 275 VGFVSKLPHDLVDAFKATLEEVTYADLILHIIDATNTSSDIQKSTTESVLKDLKADDK-- 332
Query: 393 EHVLVVGNKVDAVPPGERVTEEYDLL-ISATRGTGLAQLKEKVQDMILKA 441
+ + V NK+D + + D++ +SA + + +K+ DMI KA
Sbjct: 333 -YTITVYNKIDKLDLDIYPRNQEDMVYLSAKKNINM----DKLMDMIQKA 377
>gi|378717627|ref|YP_005282516.1| putative GTP-binding protein [Gordonia polyisoprenivorans VH2]
gi|375752330|gb|AFA73150.1| putative GTP-binding protein [Gordonia polyisoprenivorans VH2]
Length = 503
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 181/355 (50%), Gaps = 29/355 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V+D+ I + D ++ G G E L+ V T + L Q
Sbjct: 104 AALAETAGSAVLDAVIQRRNAPDPGTYIGSGKAEELREIVLATGADT--VICDGELTPGQ 161
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA------ 229
L+ + +V V DR +++ IF HA +RE + Q+++A++ Y+ R R ++
Sbjct: 162 LTALEKVVKVKVIDRTALILDIFAQHATSREGKAQVSLAQMEYMMPRLRGWGESMSRQAG 221
Query: 230 --TNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
N G +++ R + ER KL++ + +K R R+ + R P++
Sbjct: 222 GRAGSNGGVGLRGPGETKIETDRRRIRERMAKLRREIRDMKKARVTKRSARSRSAVPSLT 281
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
V GYTN GK++L+ A+T LV ++ LFATLD TT L + +++ DT+GF+ ++P
Sbjct: 282 VAGYTNAGKSSLVNAMTGSGMLV-QDALFATLDPTTRRATLDDGREVVFTDTVGFVRHLP 340
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKI-LEHVLVVG 399
T L+E F+ TLE+ + AD+++HVVD S+ +Q V + + EE + L+V
Sbjct: 341 TQLVEAFRSTLEEVVDADLLLHVVDGSDEFPAEQIAAVRRVINEVVAEEGVSAPPELLVI 400
Query: 400 NKVDAVPPGERVTE-----EYDLLISATRGTGLAQLKEKVQDMILKATGRKNITM 449
NK+DA+ R+TE + +SA G GL L ++V++ + GR ++ +
Sbjct: 401 NKIDAIDH-TRMTELRAMAPDAVFVSARTGEGLPALFDRVREFV----GRTDVEL 450
>gi|307729255|ref|YP_003906479.1| GTP-binding proten HflX [Burkholderia sp. CCGE1003]
gi|307583790|gb|ADN57188.1| GTP-binding proten HflX [Burkholderia sp. CCGE1003]
Length = 390
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 167/316 (52%), Gaps = 28/316 (8%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D K F G G E L+ + +A + + L QQ+ L+ V DR +++
Sbjct: 44 SPDAKMFVGSGKAEELR--LACEANDIELVIFNHALAPAQQRNLEQALNRRVVDRTSLIL 101
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMV 245
IF A++ E +LQ+ +A+L YL TR I T++ KG L++ R +
Sbjct: 102 DIFAQRARSHEGKLQVELAQLQYLSTRL--IRAWTHLERQKGGIGLRGPGETQLETDRRL 159
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR 305
+ ER + LK L+KL+ Q R ++ R + +V++VGYTN GK+TL ALT +
Sbjct: 160 IGERIKALKSRLDKLRRQHGTQRRQRSRNQTMSVSLVGYTNAGKSTLFNALTKAQAYAA- 218
Query: 306 NQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
NQLFATLD T+ L + +++ DT+GFI +P L+ F+ TLE+ + AD+++HVV
Sbjct: 219 NQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVV 278
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP----GERVT-EEYD--- 416
D S+ L Q V+E L + + + VLV NK+DAVP GE V +EY
Sbjct: 279 DASSAVRLDQIDQVNEVLHAIGAD--TIRQVLVF-NKIDAVPELAARGEAVERDEYGNIS 335
Query: 417 -LLISATRGTGLAQLK 431
+ +SA G GL L+
Sbjct: 336 RVFLSARTGQGLDTLR 351
>gi|294631824|ref|ZP_06710384.1| GTP-binding protein HflX [Streptomyces sp. e14]
gi|292835157|gb|EFF93506.1| GTP-binding protein HflX [Streptomyces sp. e14]
Length = 496
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 171/324 (52%), Gaps = 22/324 (6%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V+D I D ++ G G + L+ V T + L Q L+D+
Sbjct: 110 GAMVLDGVIQRRDKPDAATYIGSGKADELRDIVLETGADT--VICDGELSPGQLIHLEDI 167
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF---- 238
+V V DR +++ IF HAK+RE + Q+A+A++ Y+ R R + + + G
Sbjct: 168 VKVKVIDRTALILDIFAQHAKSREGKAQVALAQMQYMLPRLRGWGQSLSRQMGGGSGGLA 227
Query: 239 --------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKT 290
+++ R + E+ K+++ + ++K RE+ R +++R K P+VA+ GYTN GK+
Sbjct: 228 TRGPGETKIETDRRRIREKMAKMRREIAEMKTGRELKRQERRRNKVPSVAIAGYTNAGKS 287
Query: 291 TLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVT 350
+L+ LT LV N LFATLD T P+ DT+GF+ ++P L+E F+ T
Sbjct: 288 SLLNRLTGAGVLV-ENALFATLDPTVRRAETPSGRLYTLADTVGFVRHLPHHLVEAFRST 346
Query: 351 LEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP--G 408
+E+ +D+I+HVVD S+P+ +Q V E ++ + + + ++VV NK DA P
Sbjct: 347 MEEVGDSDLILHVVDGSHPNPEEQLAAVREVIRDVGATD--VPEIVVV-NKADAADPLVL 403
Query: 409 ERV--TEEYDLLISATRGTGLAQL 430
+R+ E++ + +SA G G+ +L
Sbjct: 404 QRLLRVEKHSIAVSARTGRGIPEL 427
>gi|189347079|ref|YP_001943608.1| GTP-binding proten HflX [Chlorobium limicola DSM 245]
gi|189341226|gb|ACD90629.1| GTP-binding proten HflX [Chlorobium limicola DSM 245]
Length = 434
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 186/373 (49%), Gaps = 31/373 (8%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E A ++ G V + I D S+ G G ++ L + VR + + D L
Sbjct: 34 EELAFLADTAGADVFATVIQERKLPDHASYIGSGKVDELSQLVRDEVIDIVI--VDDDLS 91
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
Q + L+ F+ V DR +++QIF AK+ A++Q+ +A+L Y+ R T++
Sbjct: 92 PVQARNLEKAFECKVIDRTGLILQIFAIRAKSARAKMQVELAQLEYMLPRLSG--QWTHL 149
Query: 233 NITKGFLDSK----------RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
+ KG + +K R ++ R LK+ L + Q + + R+ P VA+V
Sbjct: 150 SKQKGGIGTKGPGETQIETDRRLVRNRIASLKRKLRAVSLQHDT--QTRGRRSIPGVALV 207
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ AL + N+LFATLD T L +L DT+GFI +P
Sbjct: 208 GYTNAGKSTLMNALCPEAEAFAENRLFATLDTKTRRLELKINKLVLLSDTVGFIRKLPHD 267
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+E FK TL++ + AD ++HV+D S+P + +Q Q V +TL+ + + ++++ V NK+
Sbjct: 268 LVESFKSTLDEVLQADFLLHVIDASHPGFAEQMQVVRQTLKEIGVGH---DNIIDVFNKI 324
Query: 403 DAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSE 457
DA+P RV + +SA R L+ LK+ + D + + ++I R+ S
Sbjct: 325 DALPDSGSLRELRVNYPDAVFVSAAREINLSALKDAIGDHLAQEFRERSI----RTHVSN 380
Query: 458 YQ---WLMKHTAV 467
Y+ +L H V
Sbjct: 381 YKLIGYLYDHAEV 393
>gi|413962512|ref|ZP_11401739.1| GTP-binding proten HflX [Burkholderia sp. SJ98]
gi|413928344|gb|EKS67632.1| GTP-binding proten HflX [Burkholderia sp. SJ98]
Length = 422
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 166/316 (52%), Gaps = 28/316 (8%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D K F G G +E L+ Q +A + + L QQ+ L+ V DR +++
Sbjct: 44 SPDAKMFIGSGKVEELRLQC--EANDVELVIFNHALAPAQQRNLEVALNRRVVDRTSLIL 101
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMV 245
IF A++ E +LQ+ +A+L YL TR I T++ KG L++ R +
Sbjct: 102 DIFAQRARSHEGKLQVELAQLQYLSTRL--IRAWTHLERQKGGIGLRGPGETQLETDRRL 159
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR 305
+ ER + LK L KL+ Q R ++ R + +V++VGYTN GK+TL ALT +
Sbjct: 160 IGERIKALKSRLEKLRRQHGTQRRQRARNRTMSVSLVGYTNAGKSTLFNALTKAQAYAA- 218
Query: 306 NQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
+QLFATLD T+ L ++ DT+GFI +P L+ F+ TLE+ + AD+++HVV
Sbjct: 219 DQLFATLDTTSRRVFLGEEAGHVVVSDTVGFIRELPHQLVAAFRATLEETIHADVLLHVV 278
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP----GERVT-EEYD--- 416
D S+ L Q V+E L+ + + + +LV NK+DAVP GE V +EY
Sbjct: 279 DASSAVRLDQIDQVNEVLRGIGADN--IRQILVF-NKIDAVPELAARGEAVERDEYGNIS 335
Query: 417 -LLISATRGTGLAQLK 431
+ +SA G GL L+
Sbjct: 336 RVFLSARTGQGLDALR 351
>gi|119718057|ref|YP_925022.1| HSR1-like GTP-binding protein [Nocardioides sp. JS614]
gi|119538718|gb|ABL83335.1| GTP-binding protein HflX [Nocardioides sp. JS614]
Length = 493
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 171/337 (50%), Gaps = 33/337 (9%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
AL++ G V+D+ D ++ G+G ++ L+ V+ T + L Q
Sbjct: 101 ALLAETAGSEVLDAIYQRRQKPDPATYIGRGKVDGLREIVQATGADTVICDGE--LAPSQ 158
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNIT 235
+ L+D +V V DR +++ IF HAK++E + Q+ +A+L YL R R N++
Sbjct: 159 LRNLEDRLKVKVVDRTALILDIFAQHAKSKEGQAQVELAQLNYLKQRLR----GWGGNLS 214
Query: 236 KGF-------------------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
+ +++ R + + KL++ L ++KG R+ R +++R
Sbjct: 215 RQVGGRAAGGVGIGGRGPGETKIETDRRRINTKIAKLRRELKEMKGTRDTKRQERRRHHI 274
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P+V++ GYTN GK++L+ LTD LV + LFATLD TT + DT+GF+
Sbjct: 275 PSVSIAGYTNAGKSSLLNRLTDAGVLV-EDALFATLDPTTRRTTTADGRVYTMSDTVGFV 333
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
++P L+E F+ TLE+ AD+I+HVVD S+PD Q V E + ++ E L
Sbjct: 334 RHLPHQLVEAFRSTLEEVADADLILHVVDGSHPDPEGQLTAVREVFAEIGA-SQVPE--L 390
Query: 397 VVGNKVDAVPP----GERVTEEYDLLISATRGTGLAQ 429
VV NK DA P R E + +++SA G G+A+
Sbjct: 391 VVINKADAADPMVIARLRQREPHSVVVSAKTGEGVAE 427
>gi|378825779|ref|YP_005188511.1| tRNA modification GTPase mnmE [Sinorhizobium fredii HH103]
gi|365178831|emb|CCE95686.1| tRNA modification GTPase mnmE [Sinorhizobium fredii HH103]
Length = 440
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 133/431 (30%), Positives = 210/431 (48%), Gaps = 47/431 (10%)
Query: 88 VFVVQPFIKWGKKMKR----NTTRD-FMLAESKALVSSIQGWRVVDSTIISLLSFDKKSF 142
V VV K GK NT D L E+ L +I VV TI+S+ +
Sbjct: 4 VVVVPVLKKTGKPAAEVATANTRSDESRLEEATGLALAID-LDVVHGTIVSVAQPKPGTL 62
Query: 143 FGKGNLELLKRQVRGDARVTAVFVSVD-VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAH 201
G G +E + + A V VD L QQ+ L+ + V DR ++++IF
Sbjct: 63 LGSGKIEEIGHILN---EKDAGLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRR 119
Query: 202 AKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMERE 250
A T+E LQ+ +A L Y + R + T++ +G +++ R +L ER
Sbjct: 120 ASTKEGTLQVDLAHLNY--QKGRLVRSWTHLERQRGGAGFMGGPGETQIEADRRLLQERI 177
Query: 251 QKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFA 310
+L++ L +++ R++ R+K+++ P VA+VGYTN GK+TL +T L + LFA
Sbjct: 178 VRLERELEQVRRTRQLHRSKRKKVPHPIVALVGYTNAGKSTLFNRMTGAGVLA-EDMLFA 236
Query: 311 TLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPD 370
TLD T LP+ ++ DT+GFIS++PT L+ F+ TLE+ + AD+I+HV D+S+PD
Sbjct: 237 TLDPTLRRLKLPHGRMVILSDTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDLSDPD 296
Query: 371 YLQQKQHVDETLQHLELEEK-ILEHVLVVGNKVDAVPPGER-------VTEEYDLLISAT 422
Q V L L ++EK E ++ V NK+D + P R + E + +SA
Sbjct: 297 NQAQASDVLRILTDLGIDEKEGSERIVEVWNKIDRLEPEVREALVKKAASAENTIAVSAI 356
Query: 423 RGTGLAQLKEKVQDMILKATGRKNITM---RVRSGGSEYQ---WLMKHTAVSNIREDDTS 476
G G+A D++ + GR + M V G + Q W+ +H V DD
Sbjct: 357 TGEGVA-------DLLAEIGGRLSGVMTECTVALGLDQLQLLPWIYEHAIVDG--RDDLE 407
Query: 477 AEHLLLDVVMT 487
+ LD+ +T
Sbjct: 408 DGRISLDLRLT 418
>gi|410631436|ref|ZP_11342111.1| GTPase, HflX [Glaciecola arctica BSs20135]
gi|410148882|dbj|GAC18978.1| GTPase, HflX [Glaciecola arctica BSs20135]
Length = 429
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 167/310 (53%), Gaps = 21/310 (6%)
Query: 104 NTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTA 163
N+ D + E + LVSS G +D S + + F G G E + VR A
Sbjct: 22 NSKEDLL--ELQLLVSSA-GVNAIDVVTGSRQTPQARYFVGSGKAEEIANAVR--ALQAD 76
Query: 164 VFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY 223
V + L Q++ L+ L Q V DR +++ IF A+T E +LQ+ +A+L ++ TR
Sbjct: 77 VVIFNHSLSPSQERNLEQLCQCRVLDRTGLILDIFSQRARTHEGKLQVELAQLRHISTRL 136
Query: 224 RTIEDATNMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQR 273
I T+++ KG L++ R +L R + +++ L+K++ QRE R + R
Sbjct: 137 --IRGWTHLDKQKGGIGLRGPGESQLETDRRLLAARVKAIQRRLDKVQKQREQGRRSRVR 194
Query: 274 QKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTI 333
+ PTV++VGYTN GK+TL +TD ++ +QLFATLD T + L + + DT+
Sbjct: 195 AEIPTVSLVGYTNAGKSTLFNTMTDS-AVYAADQLFATLDPTLRKIQLQDVGAAILADTV 253
Query: 334 GFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILE 393
GFI ++P L+ FK TL++ A++++HVVD S+ + + V+E L+ ++ +E
Sbjct: 254 GFIRHLPHDLIAAFKATLQETQQANLLLHVVDYSDEQFRENIGQVNEVLEEIKADEI--- 310
Query: 394 HVLVVGNKVD 403
LVV NK+D
Sbjct: 311 QQLVVCNKID 320
>gi|395779857|ref|ZP_10460326.1| GTP-binding protein HflX [Bartonella washoensis 085-0475]
gi|395420232|gb|EJF86517.1| GTP-binding protein HflX [Bartonella washoensis 085-0475]
Length = 447
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 165/304 (54%), Gaps = 17/304 (5%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E+ L +I+ VV +++ +FFGKG ++ L + + + V
Sbjct: 46 LKEALGLARAIR-LDVVYYETVNIAMLRPATFFGKGKVDALAHYI-SEYHIALAIVD-HF 102
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
L QQ+ L+ ++ V DR ++++IF A+T+E LQ+ +A L Y + R + T
Sbjct: 103 LTPVQQRNLEKIWNCKVIDRTALILEIFGDRARTKEGVLQVELAHLSY--QKSRLVRSWT 160
Query: 231 NMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +G +++ R +L E+ ++++ L + R + R K+++ P V
Sbjct: 161 HLERQRGGRGFLGGPGETQIEADRRLLQEKIIRIRRELETVVKTRALHRAKRKKTSHPVV 220
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL L+ D L ++ LFATLD T + +LP+ +L DT+GFISN+
Sbjct: 221 ALVGYTNTGKSTLFNRLSGADVL-AKDMLFATLDPTLRKVVLPHGKTVLLSDTVGFISNL 279
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+ F+ TLE+ + AD+I+HV D+S+ D+ Q V E L L + EH++ V
Sbjct: 280 PTNLIAAFRATLEEVVEADLILHVKDMSDLDHRAHAQDVLEVLSSLGINIDDTEHIIEVW 339
Query: 400 NKVD 403
NK+D
Sbjct: 340 NKID 343
>gi|333902281|ref|YP_004476154.1| GTP-binding proten HflX [Pseudomonas fulva 12-X]
gi|333117546|gb|AEF24060.1| GTP-binding proten HflX [Pseudomonas fulva 12-X]
Length = 433
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 173/317 (54%), Gaps = 28/317 (8%)
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
K G G +E L+ QV+ +F V L Q++ L+ +F+ V DR +++ IF
Sbjct: 56 KFLIGSGKVEELRDQVKAHEADLVIFNHV--LTPSQERNLERMFECRVLDRTGLILDIFA 113
Query: 200 AHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLMER 249
A+T E +LQ+ +A+L ++ TR + T++ KG L++ R +L R
Sbjct: 114 QRARTHEGKLQVELAQLDHMSTRL--VRGWTHLERQKGGIGLRGPGETQLETDRRLLRVR 171
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
+++K+ L K++ QRE R ++R P+V++VGYTN GK+TL ALT+ + + +QLF
Sbjct: 172 IRQIKQKLEKVRSQREQARRGRKRADIPSVSLVGYTNAGKSTLFNALTESE-VYAADQLF 230
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T L + ++ DT+GFI ++P L+E F+ TLE++ +D+++HV+D P
Sbjct: 231 ATLDPTLRRLQLDDLGPVVLADTVGFIRHLPHKLVEAFRATLEESSNSDLLLHVIDSHEP 290
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD---AVPPGERVTEEYD-----LLISA 421
+ Q + V E L + ++ VL V NK+D V P ++ D + +SA
Sbjct: 291 ERDAQIEQVLEVLGEIGAQDL---PVLEVYNKLDLLEGVEP--QIQRNADGRPERVWLSA 345
Query: 422 TRGTGLAQLKEKVQDMI 438
G GL LK+ + +++
Sbjct: 346 RDGRGLPLLKQAIAELL 362
>gi|423711414|ref|ZP_17685734.1| GTP-binding protein HflX [Bartonella washoensis Sb944nv]
gi|395414794|gb|EJF81232.1| GTP-binding protein HflX [Bartonella washoensis Sb944nv]
Length = 447
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 165/304 (54%), Gaps = 17/304 (5%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E+ L +I+ VV +++ +FFGKG ++ L + + + V
Sbjct: 46 LKEALGLARAIR-LDVVYYETVNIAMLRPATFFGKGKVDALAHYI-SEYHIALAIVD-HF 102
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
L QQ+ L+ ++ V DR ++++IF A+T+E LQ+ +A L Y + R + T
Sbjct: 103 LTPVQQRNLEKIWNCKVIDRTALILEIFGDRARTKEGVLQVELAHLSY--QKSRLVRSWT 160
Query: 231 NMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +G +++ R +L E+ ++++ L + R + R K+++ P V
Sbjct: 161 HLERQRGGRGFLGGPGETQIEADRRLLQEKIIRIRRELETVVKTRALHRAKRKKTSHPVV 220
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL L+ D L ++ LFATLD T + +LP+ +L DT+GFISN+
Sbjct: 221 ALVGYTNTGKSTLFNRLSGADVL-AKDMLFATLDPTLRKVVLPHGKTVLLSDTVGFISNL 279
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+ F+ TLE+ + AD+I+HV D+S+ D+ Q V E L L + EH++ V
Sbjct: 280 PTNLIAAFRATLEEVVEADLILHVKDMSDLDHRAHAQDVLEVLSSLGINIDDTEHIIEVW 339
Query: 400 NKVD 403
NK+D
Sbjct: 340 NKID 343
>gi|374334904|ref|YP_005091591.1| GTPase, HflX [Oceanimonas sp. GK1]
gi|372984591|gb|AEY00841.1| GTPase, HflX [Oceanimonas sp. GK1]
Length = 428
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 168/315 (53%), Gaps = 24/315 (7%)
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
K F G G +E L V+ +F L Q++ L+ + V DR +++ IF
Sbjct: 55 KFFIGTGKVEELASLVQMHQADVVIFNHS--LSPAQERNLEREVKCRVLDRTGLILDIFA 112
Query: 200 AHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLMER 249
A+T E +LQ+ +A+L +L TR + T++ KG L++ R +L ER
Sbjct: 113 QRARTHEGKLQVELAQLRHLSTRL--VRGWTHLERQKGGIGLRGPGETQLETDRRLLRER 170
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
+ ++K L K+ QRE R +QR + PT+++VGYTN GK+TL LT+ D + +QLF
Sbjct: 171 IKYIQKRLEKVSRQREQGRRARQRNEIPTLSLVGYTNAGKSTLFNRLTESD-VYAADQLF 229
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T + LP+ + DT+GFI ++P L+ FK TL++ AD+++HVVD ++
Sbjct: 230 ATLDPTLRKIELPDAGLAILADTVGFIRHLPHDLVAAFKATLQETRDADLLLHVVDCADE 289
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD------LLISATR 423
V+ L+ +E +E VL+V NK+D + P E E D + +SA +
Sbjct: 290 QMRDNIDEVNSVLEQIEADEI---PVLMVFNKIDKLDPPEPRIERDDQGRPRAVWVSAQQ 346
Query: 424 GTGLAQLKEKVQDMI 438
G G+ L + + +++
Sbjct: 347 GLGIDGLLKALNELL 361
>gi|89054736|ref|YP_510187.1| HSR1-like GTP-binding protein [Jannaschia sp. CCS1]
gi|88864285|gb|ABD55162.1| GTP-binding protein HflX [Jannaschia sp. CCS1]
Length = 435
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 172/328 (52%), Gaps = 21/328 (6%)
Query: 87 QVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKG 146
+ V+ P IK + +R+ F L E AL +++ VVD+ ++ L FG G
Sbjct: 21 RALVLHPDIK-SDRTRRDPA--FALEEGVALAAALPDLEVVDAQVVRLPRAQPGLLFGSG 77
Query: 147 NLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTRE 206
++ L + + V + V + QQ+ L+ + + DR ++++IF A TRE
Sbjct: 78 KIQELHDLIEA-LDIGLVLIDGPVTPV-QQRNLEREWGCKLLDRTGLILEIFADRAATRE 135
Query: 207 ARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQKLKK 255
LQ+ +A L Y R R + T++ +G +++ R + E ++K+
Sbjct: 136 GVLQVELAALSY--QRTRLVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDEAVTRIKR 193
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
L K+ R + R+ + + +P VA+VGYTN GK+TL LT D + ++ LFATLD T
Sbjct: 194 QLAKVVKTRALHRSARAKVPYPIVALVGYTNAGKSTLFNRLTGADVMA-KDMLFATLDPT 252
Query: 316 THEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQK 375
LP+ ++ DT+GFIS++PT L+ F+ TLE+ + AD+I+HV D+S+P ++Q
Sbjct: 253 MRAVTLPDGTDVILSDTVGFISDLPTQLVAAFRATLEEVLDADLIVHVRDISHPQTVEQA 312
Query: 376 QHVDETLQHLELEEKILEHVLVVGNKVD 403
+ V L L + ++ + L V NKVD
Sbjct: 313 EDVHAILGDLGVSDQSAQ--LEVWNKVD 338
>gi|149196302|ref|ZP_01873357.1| hypothetical protein LNTAR_14132 [Lentisphaera araneosa HTCC2155]
gi|149140563|gb|EDM28961.1| hypothetical protein LNTAR_14132 [Lentisphaera araneosa HTCC2155]
Length = 434
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 157/280 (56%), Gaps = 23/280 (8%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIA----ELPYL---WTRYRTIE 227
QQ+ ++ + V DR ++++IF A TREARLQI +A +LP L WT
Sbjct: 95 QQRNMERESCLAVIDRREVILEIFSQRATTREARLQIDLARAEYDLPRLTRAWTHLSRQR 154
Query: 228 DATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVG 283
TNM KG ++ R ++ R +L+K L K++ QR R +++++ P A+VG
Sbjct: 155 GGTNM---KGEGERQIELDRRMVRARISRLQKELVKVRSQRATQRKQRRKKPVPNAAIVG 211
Query: 284 YTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTL 343
YTN GK++L+ LT+ ++ ++LFATLD TT +L N +L DT+GFI +P L
Sbjct: 212 YTNAGKSSLLNRLTNA-GILADDKLFATLDPTTRRILLNNNQELLLTDTVGFIRKLPHDL 270
Query: 344 LEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+E FK TLE+ ++AD +IHVVD S+PD LQQ + L L+ + K ++ NK+D
Sbjct: 271 VEAFKATLEETVVADFLIHVVDASDPDALQQMDTTFKVLNELDADTK---KTIIAFNKID 327
Query: 404 AVPPGERVT---EEYD--LLISATRGTGLAQLKEKVQDMI 438
V R+ Y + IS G G+ L+E++ ++I
Sbjct: 328 QVEHSNRLASLRSAYPDCIFISVKSGQGIELLQERMCELI 367
>gi|148553179|ref|YP_001260761.1| HSR1-like GTP-binding protein [Sphingomonas wittichii RW1]
gi|148498369|gb|ABQ66623.1| GTP-binding protein, HSR1-related [Sphingomonas wittichii RW1]
Length = 442
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 205/415 (49%), Gaps = 41/415 (9%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR-GDARVTAVFVSVD 169
L E+ L ++I G VVD L + FG G ++ + R G+A + V ++
Sbjct: 37 LDEAAGLAAAI-GVDVVDKLAFRLRDPKPATLFGSGQVDQIALAARQGEAELIIVDAALT 95
Query: 170 VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT- 221
+ QQ+ L+ + V DR ++++IF A T E RLQ+ +A L Y WT
Sbjct: 96 PI---QQRNLEKATEAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVRSWTH 152
Query: 222 --RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
R R + +++ R ++ +R KL++ L +++ R + R ++QR +P +
Sbjct: 153 LERQRGGF-GFLGGPGETQIEADRRLIRDRMAKLRRELEQVRRTRGLHRARRQRAPWPVI 211
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL +T ++ + LFATLD T + LP + + DT+GF+S++
Sbjct: 212 ALVGYTNAGKSTLFNRMTGA-KVMAEDLLFATLDPTMRQISLPGLDKAILSDTVGFVSDL 270
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEH----- 394
PT L+ F+ TLE+ ADII+HV D+S+PD Q V L + + + E
Sbjct: 271 PTQLVAAFRATLEEVTGADIILHVRDISHPDSDAQAGDVLAVLGEIGVGPRAPEGHGSGE 330
Query: 395 ------VLVVGNKVDAVPPGERVTEEYDLL-------ISATRGTGLAQLKEKVQDMILKA 441
+L V NK+D + P R E + +SA G G+ +L+ V D + +
Sbjct: 331 AGEGAPILEVWNKIDMLDPEARAATEAEAARRDDVAPLSALTGEGVEELRRLVSDRL--S 388
Query: 442 TGRKNITMRVR-SGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFK 495
TG + T+ V + G+ WL + V + + ++++V ++D + +F+
Sbjct: 389 TGNRVRTLSVPIADGAALAWLHANGEVIG---QEVEGDAMIVEVRLSDKDLARFE 440
>gi|330501624|ref|YP_004378493.1| HSR1-like GTP-binding protein [Pseudomonas mendocina NK-01]
gi|328915911|gb|AEB56742.1| GTP-binding protein, HSR1-related protein [Pseudomonas mendocina
NK-01]
Length = 433
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 172/315 (54%), Gaps = 24/315 (7%)
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVD-VLKLHQQKMLQDLFQVPVFDRYMIVIQIF 198
K G G +E L+ QV+ V A V + L Q++ L+ F+ V DR +++ IF
Sbjct: 56 KFLIGSGKVEELRDQVKA---VEADLVIFNHTLTPSQERNLERAFECRVLDRTGLILDIF 112
Query: 199 KAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLME 248
A+T E +LQ+ +A+L ++ TR + T++ KG L++ R +L
Sbjct: 113 AQRARTHEGKLQVELAQLDHMSTRL--VRGWTHLERQKGGIGLRGPGETQLETDRRLLRV 170
Query: 249 REQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQL 308
R +++K+ L K++ QRE R ++R P+V++VGYTN GK+TL ALT + + +QL
Sbjct: 171 RIRQIKQKLEKVRSQREQARRGRKRADIPSVSLVGYTNAGKSTLFNALTTSE-VYAADQL 229
Query: 309 FATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSN 368
FATLD T L + I+ DT+GFI ++P L+E F+ TLE++ +D+++HV+D
Sbjct: 230 FATLDPTLRRLELDDLGPIVLADTVGFIRHLPHKLVEAFRATLEESSNSDLLLHVIDAHE 289
Query: 369 PDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD-----LLISATR 423
P+ + Q + V E L+ + + + V + +D V P ++ + D + +SA
Sbjct: 290 PERMAQIEQVQEVLKEIGASDLPMLEVYNKLDLLDGVEP--QIQRDGDGNPVRVWLSARE 347
Query: 424 GTGLAQLKEKVQDMI 438
G GL L++ V +++
Sbjct: 348 GRGLELLRQAVAELL 362
>gi|298713744|emb|CBJ33718.1| PHflX, plastid HflX GTPase [Ectocarpus siliculosus]
Length = 823
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 177/346 (51%), Gaps = 33/346 (9%)
Query: 109 FMLAESKALVSSIQG---WRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVF 165
F L ES A +S + G V ST +L + +++ G G ++ +K + T +F
Sbjct: 365 FTLEESMAELSELAGTAGLEVAGSTYQRVLEPNPRTYIGTGKVKEIKSAMNQLGVCTVIF 424
Query: 166 VSVDVLKLHQQKMLQDLFQ-----VPVFDRYMIVIQIFKAHAKTREARLQIAIA----EL 216
D L QQ+ L+ F + V DR +++ IF HAKTRE +LQ+ +A L
Sbjct: 425 D--DELSPGQQRSLEVEFGGEAAGIKVLDRTALILDIFAQHAKTREGQLQVDLALHMYRL 482
Query: 217 PYL---WTRYRTIEDATNM-NITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQ 272
P L WT + + + L+ R +L ++ LKK L+ ++ R+ R ++
Sbjct: 483 PRLTKMWTHLERQQGGVGLRGPGERQLEVDRRLLKDKIIALKKELSGVRRHRDFQRRGRK 542
Query: 273 RQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPN---RLRILY 329
+ P VA+VGYTN GK+TL+ LT ++ N LFATLD TT + L ++
Sbjct: 543 KLGLPVVALVGYTNAGKSTLLNTLTRA-GVMAENMLFATLDPTTRKVKLSGLKVHPEVML 601
Query: 330 VDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEE 389
DT+GFI +PT L+ F+ TLE+ + AD+I+H+VDVS+P +Q+ V L ++ +
Sbjct: 602 TDTVGFIQKLPTNLVAAFRATLEEVVEADVIVHIVDVSSPSREKQESAVTGVLGEMKTSD 661
Query: 390 KILEHVLVVGNKVDAVPPGE----RV-TEEYDLLI---SATRGTGL 427
K L + NK+D +P E RV EE D L SA G GL
Sbjct: 662 K---PRLTMWNKLDLLPEEEQEQVRVDAEERDELTVAASAMTGEGL 704
>gi|430749974|ref|YP_007212882.1| GTP-binding protein HflX [Thermobacillus composti KWC4]
gi|430733939|gb|AGA57884.1| GTP-binding protein HflX [Thermobacillus composti KWC4]
Length = 428
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 147/274 (53%), Gaps = 14/274 (5%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D + F GKG +E L+ + TA+F L Q + L++ + + DR +++ I
Sbjct: 62 DPRFFLGKGKVEELRAVAQELGATTAIFDQE--LSGAQVRNLEEGLDLKIIDRTQLILDI 119
Query: 198 FKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMER 249
F AKTRE +Q+ +A+L YL R R + L++ R + ER
Sbjct: 120 FAGRAKTREGIIQVELAQLSYLLPRLAGHGKNLSRLGGGIGTRGPGETKLETDRRHIRER 179
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
LK+ L ++ R + R ++++ VA+VGYTN GK+TL++ LT+ D V NQLF
Sbjct: 180 IADLKRQLKEVVRHRSVQRERRRKTGVTQVALVGYTNAGKSTLLRELTNADVYV-ENQLF 238
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T+ LP+ ++ DT+GFI N+P L+ F+ TLE+A AD+I+HVVD S+P
Sbjct: 239 ATLDPTSRAWTLPDGTEVVLTDTVGFIQNLPHELVAAFRSTLEEAAEADLILHVVDSSSP 298
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+Q VD L L ++ +V+ NK+D
Sbjct: 299 YREEQMAVVDRILTELGAGDR---PRIVLYNKID 329
>gi|428217773|ref|YP_007102238.1| GTP-binding proten HflX [Pseudanabaena sp. PCC 7367]
gi|427989555|gb|AFY69810.1| GTP-binding proten HflX [Pseudanabaena sp. PCC 7367]
Length = 588
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 177/348 (50%), Gaps = 21/348 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E + LV S G +V+D ++ G+G +E + + A+ + V
Sbjct: 247 LLEMQQLVESA-GGQVLDLIAQKRDRPHPQTVIGQGKVEEIA--LAAQAQRANLIVFNQE 303
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY------- 223
L Q + L+ L + V DR +++ IF A++ +LQ+ +A+L Y R
Sbjct: 304 LSPAQTRNLERLLGIRVSDRTEVILDIFAQRAQSAAGKLQVELAQLEYRLPRLSGRGQAL 363
Query: 224 -RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
R + L+S R + +R L++ +N+L+ QR+ MR ++ +Q+ PTVA+V
Sbjct: 364 SRLGGGIGTRGPGETKLESDRRTIQKRISHLQRQVNQLQAQRDRMRQRRVKQEIPTVAIV 423
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ +LT + +QLFATLD TT + IL DT+GFI +P
Sbjct: 424 GYTNAGKSTLLNSLTKSTAYAA-DQLFATLDPTTRRLNIAGHEPILLTDTVGFIHELPPP 482
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L++ F+ TLE+ AD ++HVVD S+P +L Q + V++ L + + + VL+ NK
Sbjct: 483 LVDAFRATLEEVTEADALLHVVDASHPAWLDQVRSVNQILAEMPIA---VGPVLLAFNKC 539
Query: 403 D------AVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGR 444
D A+ R +LISAT+ G L++ + ++ A G+
Sbjct: 540 DRMEDFGAIQDFIRTENVNAVLISATKRKGFEDLQQGLIKLVSYAVGK 587
>gi|197120636|ref|YP_002132587.1| GTP-binding proten HflX [Anaeromyxobacter sp. K]
gi|196170485|gb|ACG71458.1| GTP-binding proten HflX [Anaeromyxobacter sp. K]
Length = 607
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 203/408 (49%), Gaps = 32/408 (7%)
Query: 56 FSDNSQDDLEESDEFKTIRD---EAQTGALGTDHQVFVVQP-----------FIKWGKKM 101
+N Q + + +E T+ D +A +GAL + + + + +G K
Sbjct: 139 LPENPQGAMWKDEEAPTVHDLAYDALSGALALEDEFARARAARRTGGRERAILVGFGGKG 198
Query: 102 KRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARV 161
+ + L E K L + G V+++T+ D + GKG LE + +R R+
Sbjct: 199 RGRAEAEASLEELKELART-AGVEVLEATLQLRRDPDPRYLIGKGKLEDIV--LRSMQRM 255
Query: 162 TAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWT 221
V V L Q + + + + + DR +++ IF A++ + +LQ+ +A+L YL+
Sbjct: 256 ATVIVFDAELSPSQARHIAEATSLKILDRTQLILDIFAQRAQSADGKLQVELAQLKYLYP 315
Query: 222 RYRTIEDATN--------MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQR 273
R +D+ + + L+ R + +R L++ + L R + R ++
Sbjct: 316 RLVGRDDSLSRLAGGIGGRGPGETKLEIDRRRVRDRITALERRIEALGADRHLRRKQRNA 375
Query: 274 QKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTI 333
+ P +++VGYTN GK+TL+ ALTD +++ ++LFATLD T+ P ++ DT+
Sbjct: 376 RGLPVLSIVGYTNAGKSTLLNALTDS-AVLAEDKLFATLDPTSRRLRFPRDREVIITDTV 434
Query: 334 GFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILE 393
GFI ++P L+ F+ TLE+ AD+++HVVD S+P +Q V+E L+ L L+ K
Sbjct: 435 GFIRDLPPDLVNAFRATLEELGDADLLLHVVDASDPRQDEQIAAVEEILRGLGLDGK--- 491
Query: 394 HVLVVGNKVDAVPPGER--VTEEYD-LLISATRGTGLAQLKEKVQDMI 438
L+V NKVD +PP R + + D +SA GLA L + + ++
Sbjct: 492 RRLLVLNKVDRLPPETRAALAQRRDAAAVSAVTRAGLAGLLSRCEQLL 539
>gi|427734548|ref|YP_007054092.1| GTP-binding protein HflX [Rivularia sp. PCC 7116]
gi|427369589|gb|AFY53545.1| GTP-binding protein HflX [Rivularia sp. PCC 7116]
Length = 582
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 168/318 (52%), Gaps = 34/318 (10%)
Query: 155 VRGDARVTAVFVSVDVLKLH-----------QQKMLQDLFQVPVFDRYMIVIQIFKAHAK 203
V G+ +V + +SV L + Q + L+ V V DR +++ IF A+
Sbjct: 268 VVGEGKVQEIALSVQTLGANLVVFDRDLSPAQVRNLEAQIGVRVVDRTEVILDIFAQRAR 327
Query: 204 TREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQKLKK 255
+ +LQ+ +A+L Y+ R R + L+++R + R +L+K
Sbjct: 328 SGAGKLQVELAQLEYMLPRLTGRGQAMSRLGGGIGTRGPGETKLETERRAISRRITRLQK 387
Query: 256 ALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVT 315
+N+L+ RE +R ++Q ++ PT+A+VGYTN GK+TL+ ALT + S+ +QLFATLD T
Sbjct: 388 EVNQLQAHRERLRQRRQHREIPTIAIVGYTNAGKSTLLNALT-NASVYTADQLFATLDPT 446
Query: 316 THEGMLPNRL-----RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPD 370
T ++P+ + IL DT+GFI +P L++ F+ TLE+ AD ++H+VD+S+P
Sbjct: 447 TRRLVVPHAVTNEAQEILVTDTVGFIHELPEALMDAFRATLEEVTEADALVHLVDLSHPA 506
Query: 371 YLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT---EEYDL--LISATRGT 425
+L + V + L + + LVV NK+D E + EEY + ISA
Sbjct: 507 WLSHIRSVRDILAQMPVTPG---PGLVVFNKIDRA-NSETLALAREEYPMAVFISAYERL 562
Query: 426 GLAQLKEKVQDMILKATG 443
GL L+E++ +I AT
Sbjct: 563 GLETLRERLAQLIQYATA 580
>gi|371776458|ref|ZP_09482780.1| GTP-binding protein HflX [Anaerophaga sp. HS1]
Length = 403
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 169/316 (53%), Gaps = 19/316 (6%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G + V + SL DK+ F G+G LE + V+ V AV D L Q
Sbjct: 37 AFLAETAGAKPVCRFVQSLPMPDKRFFVGRGKLEEIVAYVKIHEDVNAVIFD-DELTPSQ 95
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYL-------WTRYRTIED 228
K L++ + + DR +++ IF A+T A+ Q+ +A+ YL WT
Sbjct: 96 LKNLEEALRRRILDRTNLILDIFAKRARTAHAKTQVELAQYQYLLPRLTRMWTHLERQRG 155
Query: 229 ATNM-NITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
M + +++ R ++ ++ KLK L K+ Q+ R K R K VA+VGYTN
Sbjct: 156 GIGMRGPGEKEIETDRRIIRDKIAKLKADLQKIDRQKSTQR--KNRGKLVRVALVGYTNV 213
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GK+T++ ALT + + N+LFATLD T + ++ N L L DT+GFI +P L+E F
Sbjct: 214 GKSTIMNALTKSN-VFAENKLFATLDTTVRKVVIGN-LPFLLADTVGFIRKLPHHLVESF 271
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP 407
K TL++ ADI++HVVD+S+P + +Q + V++TL ++ EK V++V NK+DA
Sbjct: 272 KSTLDEVREADILLHVVDISHPGFEKQIEVVNQTLHEIDEREK---PVIMVFNKIDAF-- 326
Query: 408 GERVTEEYDLLISATR 423
V +E D L TR
Sbjct: 327 -TYVQKEEDDLTPVTR 341
>gi|407459071|ref|YP_006737174.1| GTP-binding proten HflX [Chlamydia psittaci M56]
gi|405786165|gb|AFS24910.1| GTP-binding proten HflX [Chlamydia psittaci M56]
Length = 458
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 180/349 (51%), Gaps = 28/349 (8%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ + V DR ++++IF A T EA LQ+ +A YL R + +
Sbjct: 113 QQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLPRLKRMWGHLSRQK 172
Query: 227 -EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
+ KG ++ R ++ ER KL L ++ QR+ R K+++ P+ A+
Sbjct: 173 SGGGSGGGFVKGEGEKQIELDRRMVRERIHKLTLDLKSVEKQRKERRKAKEKRGIPSFAL 232
Query: 282 VGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPT 341
+GYTN GK+TL+ LT ++ V ++LFATLD T +LP+ R+L DT+GFI +P
Sbjct: 233 IGYTNSGKSTLLNLLTSAETYV-EDKLFATLDPKTRRCVLPSGQRVLVTDTVGFIRKLPH 291
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
TL+ FK TLE A+ D+++HVVD S+P + + E L+ L ++ ++ V NK
Sbjct: 292 TLVAAFKSTLEAALHEDVLLHVVDASHPLAFEHIETTQEILKELGVD---YPKIITVLNK 348
Query: 402 VDAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGS 456
+D +P G+ R+ +LISA G G+ L E + D+I + + + G
Sbjct: 349 IDELPNGKASTKLRLLSPRAVLISAKTGEGIQNLLEAMTDVITEGFPEVTLKFSYKDYGK 408
Query: 457 EYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSRKRG 505
+ +S+ R+DD L+++ + + K++ +FI +RKR
Sbjct: 409 FTELYDAGLVLSHRRKDDI----LIVEAYLPKELEKKYR-QFI-ARKRS 451
>gi|337268990|ref|YP_004613045.1| GTP-binding proten HflX [Mesorhizobium opportunistum WSM2075]
gi|336029300|gb|AEH88951.1| GTP-binding proten HflX [Mesorhizobium opportunistum WSM2075]
Length = 468
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 154/294 (52%), Gaps = 14/294 (4%)
Query: 127 VDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVP 186
V + ++++ + G G +E V+ R + + L QQ+ L+
Sbjct: 74 VHTAVVTVNDPRPATLLGSGKVEEFAEIVK--ERHAELVIVDHPLTPVQQRNLEKELNAK 131
Query: 187 VFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWT---RYRTIEDATNMNITK 236
V DR ++++IF A+T+E LQ+ +A L Y WT R R +
Sbjct: 132 VLDRTGLILEIFGERARTKEGTLQVELAHLNYQKGRLVRSWTHLERQRGGA-GFLGGPGE 190
Query: 237 GFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKAL 296
++S R L E+ KLK L ++ R++ R K+++ FP VA+VGYTN GK+TL L
Sbjct: 191 TQIESDRRQLQEKIIKLKHELETVRRTRDLHRAKRKKVPFPVVAIVGYTNAGKSTLFNRL 250
Query: 297 TDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAML 356
T D L ++ LFATLD T LP+ I+ DT+GFIS++PT L+ F+ TLE+ +
Sbjct: 251 TGADVLA-QDMLFATLDPTLRRVRLPHGTPIILSDTVGFISDLPTHLIAAFRATLEEVVE 309
Query: 357 ADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER 410
AD++IH+ D+S+PD Q + V+ L L ++ + V+ V NK+D + G R
Sbjct: 310 ADLVIHLRDISDPDTAAQAEDVERILADLGVDAGDAKRVIEVWNKIDQLDEGNR 363
>gi|134302062|ref|YP_001122031.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis WY96-3418]
gi|421751876|ref|ZP_16188913.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis AS_713]
gi|421753731|ref|ZP_16190720.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 831]
gi|421757457|ref|ZP_16194337.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 80700103]
gi|421759314|ref|ZP_16196147.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 70102010]
gi|424674632|ref|ZP_18111548.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 70001275]
gi|134049839|gb|ABO46910.1| GTP-binding protein [Francisella tularensis subsp. tularensis
WY96-3418]
gi|409086413|gb|EKM86532.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 831]
gi|409086603|gb|EKM86719.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis AS_713]
gi|409091040|gb|EKM91045.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 70102010]
gi|409092545|gb|EKM92516.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 80700103]
gi|417434676|gb|EKT89618.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 70001275]
Length = 435
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 166/311 (53%), Gaps = 24/311 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D K F G G +E++K + D + V L Q++ ++ + V DR ++++I
Sbjct: 56 DIKYFCGMGKIEMIKN--KRDELEADLVVFNHPLTPSQERNIEKFLECRVMDRTRLILEI 113
Query: 198 FKAHAKTREARLQIAIAELPYLWTRY---------RTIEDATNMNITKGFLDSKRMVLME 248
F AKT E +LQ+ +A+L Y TR + + L+ R ++ +
Sbjct: 114 FSLRAKTYEGKLQVELAQLNYQSTRLVKGWIHLERQKGGIGVRGGPGETQLEIDRRLIRQ 173
Query: 249 REQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQL 308
R +++ + L K+K R++ R+ +++ PT++ VGYTN GK+TL +T+ D L ++QL
Sbjct: 174 RIKQIAQKLEKVKHHRDLSRSSRKKNNIPTISFVGYTNAGKSTLFNKITNADVLA-KDQL 232
Query: 309 FATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSN 368
FATLD T + ++P +++ DT+GFI N+P L+E F TLE+A+ +D+++HV+D ++
Sbjct: 233 FATLDPTLRKVIVPKLGEVIFSDTVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYAD 292
Query: 369 PDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA---VPPGERVTEEYD------LLI 419
D+ + V++ L + + +K + V NK+D + P E+ D + +
Sbjct: 293 EDHKSYIEQVEKVLSEIGIADK---ETICVYNKIDKLENIKPSFVPLEDSDSSVVSRVYL 349
Query: 420 SATRGTGLAQL 430
SA G GL +
Sbjct: 350 SAQNGDGLVEF 360
>gi|167562556|ref|ZP_02355472.1| GTP-binding protein HflX [Burkholderia oklahomensis EO147]
gi|167569738|ref|ZP_02362612.1| GTP-binding protein HflX [Burkholderia oklahomensis C6786]
Length = 392
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 168/316 (53%), Gaps = 28/316 (8%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D F G G E L+ + +A + + L QQ+ L+ + V DR +++
Sbjct: 49 SPDAAMFVGSGKAEELR--LACEANDVEIVIFNHALAPAQQRNLERMLNRRVVDRTSLIL 106
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMV 245
IF A++ E +LQ+ +A+L YL TR I T++ KG L++ R +
Sbjct: 107 DIFAQRARSHEGKLQVELAQLQYLATRL--IRAWTHLERQKGGIGLRGPGETQLETDRRL 164
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR 305
+ ER + LK L KL+ Q R ++ R +V++VGYTN GK+TL ALT +
Sbjct: 165 IGERIKMLKTRLEKLRRQHHTQRRQRARSGTMSVSLVGYTNAGKSTLFNALTKAQAYAA- 223
Query: 306 NQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
+QLFATLD T+ L + + +I+ DT+GFI +P L+ F+ TLE+ + AD+++HVV
Sbjct: 224 DQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVV 283
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP----GERVT-EEYD--- 416
D S+ L+Q + V+E L E+ + +LV NK+DAVP G+ V +EY
Sbjct: 284 DASSAVRLEQIEQVNEVLH--EIGADSIRQILVF-NKIDAVPELEARGDAVERDEYGNIS 340
Query: 417 -LLISATRGTGLAQLK 431
+ +SA G GL L+
Sbjct: 341 RVFLSARTGQGLDSLR 356
>gi|326202948|ref|ZP_08192815.1| GTP-binding proten HflX [Clostridium papyrosolvens DSM 2782]
gi|325987025|gb|EGD47854.1| GTP-binding proten HflX [Clostridium papyrosolvens DSM 2782]
Length = 596
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 179/353 (50%), Gaps = 22/353 (6%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G VVD + + D + GKG +E L + A + + D L Q + ++++
Sbjct: 218 GAVVVDKVLQKKQTEDSAYYIGKGKIEELSLMCQ--ASDVQLLIFDDELSGAQIRNIEEM 275
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNI 234
+V V DR +++ IF A +RE +LQ+ +A+L Y R R
Sbjct: 276 VKVRVIDRTTLILDIFAQRAVSREGKLQVELAQLKYKLPRLMGMGTQLSRLGGGIGTRGP 335
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ L+ R + R L++ L +L+ +RE +R+ + P +A+VGYTN GK+TL+
Sbjct: 336 GEKKLEVDRRHIRRRITGLEQELKQLEKRREFLRSNRTSNNTPVIAIVGYTNAGKSTLLN 395
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
+ + LV ++LFATLD + + + + + VDT+GFI +P L+E FK TLE+A
Sbjct: 396 RMCGSEVLV-EDKLFATLDPSARQLTMSDGREAILVDTVGFIRKLPHDLIEAFKSTLEEA 454
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERV-TE 413
+ AD+++HVVD SN + Q V++ L+ L K + ++V NK D + G R+ T
Sbjct: 455 VHADMLLHVVDASNENVSMQISVVEKLLEELGASTK---NTILVLNKQDLIKDGRRISTV 511
Query: 414 EYDLL--ISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKH 464
Y + ISA+ G G+ QL EK+ + + N+ + G W+M +
Sbjct: 512 GYSSVCEISASTGFGIEQLLEKITEGFMHQLKEVNLLVPYNDG-----WVMPY 559
>gi|403252265|ref|ZP_10918575.1| GTP-binding proten HflX [Thermotoga sp. EMP]
gi|402812278|gb|EJX26757.1| GTP-binding proten HflX [Thermotoga sp. EMP]
Length = 406
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 186/358 (51%), Gaps = 41/358 (11%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD- 169
L E K L ++ G VV+ D ++ GKG L+ LK V A V VD
Sbjct: 16 LEEMKGLCKTL-GVEVVEWLWQKRAKPDPATYLGKGKLQKLKEVVEF---CEADLVVVDD 71
Query: 170 VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIA----ELPYLWTR--- 222
+ Q K +Q V V DR ++++IF HA + E +LQ+ +A ELP L R
Sbjct: 72 EITPVQYKNMQSELNVDVLDRTQVILEIFARHATSEEGKLQVEMASLLYELPRLVGRGEE 131
Query: 223 -YRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
R + L+ R + R +L+K L +++ +R R ++ +K P V++
Sbjct: 132 LSRLGGGIGTRGPGEPLLEVLRRHIKNRIAQLRKRLKEIEQERNTQRKQRLEKKIPHVSI 191
Query: 282 VGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPT 341
VGYTN GK+TL+K LTD D V ++LFATL+ T L + IL DT+GFI +P
Sbjct: 192 VGYTNAGKSTLLKVLTDSDVYVA-DKLFATLEPVTRRLKLKSGRVILVSDTVGFIRKLPH 250
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV------ 395
T++ FK TLE+ +D++IH+VD S+P YL++K ++ EK+LE +
Sbjct: 251 TIVSAFKATLEEIKYSDVLIHLVDASDP-YLEEK---------MKASEKVLEEIGADKIP 300
Query: 396 -LVVGNKVDAVPPGERVTE---EYD--LLISATRGTGLAQLKEKVQDMILKATGRKNI 447
++V NK+D P ER+ +Y L ISA + GL QL + +++++ G+K+I
Sbjct: 301 RILVFNKIDLC-PRERIETLKWKYPEALFISAEKRIGLDQLLDTLEEIM----GQKDI 353
>gi|220915348|ref|YP_002490652.1| GTP-binding proten HflX [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953202|gb|ACL63586.1| GTP-binding proten HflX [Anaeromyxobacter dehalogenans 2CP-1]
Length = 607
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 203/408 (49%), Gaps = 32/408 (7%)
Query: 56 FSDNSQDDLEESDEFKTIRD---EAQTGALGTDHQVFVVQP-----------FIKWGKKM 101
+N Q + + +E T+ D +A +GAL + + + + +G K
Sbjct: 139 LPENPQGAMWKDEEAPTVHDLAYDALSGALALEDEFARARAARRTGGRERAILVGFGGKG 198
Query: 102 KRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARV 161
+ + L E K L + G V+++T+ D + GKG LE + +R R+
Sbjct: 199 RGRAEAEASLEELKELART-AGVEVLEATLQLRRDPDPRYLIGKGKLEDIV--LRSMQRM 255
Query: 162 TAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWT 221
V V L Q + + + + + DR +++ IF A++ + +LQ+ +A+L YL+
Sbjct: 256 ATVIVFDAELSPSQARHIAEATSLKILDRTQLILDIFAQRAQSADGKLQVELAQLKYLYP 315
Query: 222 RYRTIEDATN--------MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQR 273
R +D+ + + L+ R + +R L++ + L R + R ++
Sbjct: 316 RLVGRDDSLSRLAGGIGGRGPGETKLEIDRRRVRDRITALERRIEALGADRHLRRKQRNA 375
Query: 274 QKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTI 333
+ P +++VGYTN GK+TL+ ALTD +++ ++LFATLD T+ P ++ DT+
Sbjct: 376 RGLPVLSIVGYTNAGKSTLLNALTDS-AVLAEDKLFATLDPTSRRLRFPRDREVIITDTV 434
Query: 334 GFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILE 393
GFI ++P L+ F+ TLE+ AD+++HVVD S+P +Q V+E L+ L L+ K
Sbjct: 435 GFIRDLPPDLVNAFRATLEELGDADLLLHVVDASDPRQDEQIAAVEEILRGLGLDGK--- 491
Query: 394 HVLVVGNKVDAVPPGER--VTEEYD-LLISATRGTGLAQLKEKVQDMI 438
L+V NKVD +PP R + + D +SA GLA L + + ++
Sbjct: 492 RRLLVLNKVDRLPPETRAALAQRRDAAAVSAVTRAGLAGLLSRCEQLL 539
>gi|297538136|ref|YP_003673905.1| GTP-binding proten HflX [Methylotenera versatilis 301]
gi|297257483|gb|ADI29328.1| GTP-binding proten HflX [Methylotenera versatilis 301]
Length = 375
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 191/371 (51%), Gaps = 35/371 (9%)
Query: 83 GTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSF 142
G D + V F + N R ++ ++ +I+G R D K F
Sbjct: 7 GGDAAIMVSVDFGDNDYEESLNELRQLSISAGLSIRGTIEGKRATP---------DAKLF 57
Query: 143 FGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHA 202
G G + L + ++ AVF + D L QQ+ L+ L + V DR +++ IF A
Sbjct: 58 IGSGKADELAQMMQASESNIAVF-NHD-LSPSQQRNLERLLKARVVDRTGLILDIFSQRA 115
Query: 203 KTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQ 251
++ E +LQ+ +A+L +L TR + T++ KG L+ R +L R +
Sbjct: 116 QSHEGKLQVELAQLEHLSTRL--VRGWTHLERQKGGIGVRGGPGETQLELDRRMLRVRVK 173
Query: 252 KLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFAT 311
+L++ L KLK QR M R ++R TV++VGYTN GK+T+ LT D V +QLFAT
Sbjct: 174 QLREKLIKLKAQRGMQRRARKRSNVMTVSLVGYTNAGKSTVFNRLTKADIYVA-DQLFAT 232
Query: 312 LDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDY 371
LD TTH+ + + ++ DT+GFI ++P L+E F TLE+A AD+++H+VD ++ +
Sbjct: 233 LDTTTHKIYIADAGSVVLSDTVGFIKHLPHALVEAFGATLEEAAQADLLLHIVDTASTNR 292
Query: 372 LQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV--PPGERVTEEYDLLI----SATRGT 425
+Q V++ L LE+ + +L V N++D V PP +EY + SA+ G
Sbjct: 293 DEQIAQVNKVL--LEIGAANVPQIL-VHNQIDRVGLPPSVS-RDEYGRITTIHASASTGE 348
Query: 426 GLAQLKEKVQD 436
G+ L++ + +
Sbjct: 349 GMDLLRQAMAE 359
>gi|422110632|ref|ZP_16380580.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309378588|emb|CBX22766.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 392
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 166/353 (47%), Gaps = 35/353 (9%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKS---FFGKGNLELLKRQVRGDARVTAVFVS 167
LAE+ LV + G D ++ D+ F G G L V D VF
Sbjct: 44 LAEAVELVKAAGG----DPVLVKTAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFN- 98
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTR----Y 223
L Q++ L+ + Q V DR +++ IF A+T+E RLQ+ +A+L +L R Y
Sbjct: 99 -HELTPTQERNLEKILQCRVLDRVGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGY 157
Query: 224 RTIEDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ KG L++ R ++ R LKK L LK QR + R ++ T
Sbjct: 158 GHLQSQRGGIGMKGPGETKLETDRRLIAHRINALKKQLANLKKQRALRRKPRESGGIKTF 217
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL LT + NQLFATLD T + I+ DT+GF+SN+
Sbjct: 218 ALVGYTNAGKSTLFNRLTKAGAYA-ENQLFATLDTTARRLYIHPECSIILTDTVGFVSNL 276
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
P L+ F TLE+ AD+++HVVD + P QQ + V+ L+ ++ + + V
Sbjct: 277 PHKLISAFSATLEETAQADVLLHVVDAAAPGKEQQIEDVESVLKEIKADRI---PCIRVY 333
Query: 400 NKVDAVPPGER-----------VTEEYDLLISATRGTGLAQLKEKVQDMILKA 441
NK D +P R +T Y +SA TG+ L+E + + A
Sbjct: 334 NKTDLMPSEARQSGIKRDSTGKITAVY---LSAAENTGIGALREAIAEYCAAA 383
>gi|169831271|ref|YP_001717253.1| HSR1-like GTP-binding protein [Candidatus Desulforudis audaxviator
MP104C]
gi|169638115|gb|ACA59621.1| GTP-binding protein, HSR1-related [Candidatus Desulforudis
audaxviator MP104C]
Length = 422
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 161/310 (51%), Gaps = 15/310 (4%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D F G+G E L A + + L Q + L+++ V V DR I++ I
Sbjct: 57 DPAHFVGRGKAEELAALC--SAAGAGLLIFDQDLSPAQARNLENVTGVRVLDRTQIILDI 114
Query: 198 FKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMER 249
F A+TRE +LQ+ +A+L Y+ R R + L++ R + +R
Sbjct: 115 FARRARTREGKLQVELAQLNYVLPRLTGRGTELSRLGGGIGTRGPGETKLETDRRRIRQR 174
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
L++ + +++ R+++R ++ P VA+VGYTN GK++L+ ALT V ++LF
Sbjct: 175 IADLQREIAEVRRHRQLLRRARKVAPVPLVALVGYTNAGKSSLLNALTGAVVSV-EDRLF 233
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T+ + LP ++ DT+GFI ++P L+ F+ TLE+ + AD+++HVVD+S+P
Sbjct: 234 ATLDPTSRQLRLPTNEVVVLTDTVGFIRHLPHHLVAAFRATLEEVVEADLLLHVVDLSHP 293
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGE-RVTEEYDLLISATRGTGLA 428
+ VD L+ L K L+V NK D V PGE + D+ +SA G GL
Sbjct: 294 AHQAHITAVDGVLEELGAGGK---PRLMVFNKTDLVEPGELDLLGRNDVAVSALTGAGLD 350
Query: 429 QLKEKVQDMI 438
L+ V D +
Sbjct: 351 TLRAAVADAL 360
>gi|288817738|ref|YP_003432085.1| GTP-binding protein [Hydrogenobacter thermophilus TK-6]
gi|384128500|ref|YP_005511113.1| GTP-binding proten HflX [Hydrogenobacter thermophilus TK-6]
gi|288787137|dbj|BAI68884.1| GTP-binding protein [Hydrogenobacter thermophilus TK-6]
gi|308751337|gb|ADO44820.1| GTP-binding proten HflX [Hydrogenobacter thermophilus TK-6]
Length = 370
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 193/357 (54%), Gaps = 29/357 (8%)
Query: 103 RNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVT 162
+ R++ + E K LV ++ G +V+ + + D + + G G LE +K+ + G + T
Sbjct: 15 KEEVREY-IEELKELVKAVGG-KVLGYVVQRRSAPDARYYIGAGKLEEIKQVIEGVSADT 72
Query: 163 AVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIA----ELPY 218
+F + L Q L++ V V DR +V++IF +++ A+LQ+ +A ELP
Sbjct: 73 IIFNTF--LSPSQIHNLENALGVKVLDRADLVLEIFSRRVRSKTAKLQVELAKLELELPR 130
Query: 219 LWTR----YRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQ 274
L+ R R + + +R + +R Q++++ L ++K QR+ R ++ R
Sbjct: 131 LYGRGKELSRLGGGVGTRGPGEQEAEVRRRWIKKRIQQIREELEEVKKQRKEQRKRRDRW 190
Query: 275 ----KFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYV 330
+ VA+VGYTN GK++L++ LT ++ V + FATLD T + L +++L
Sbjct: 191 HSDIRIVKVALVGYTNVGKSSLMRLLTGRETFVA-DMPFATLDTKTSDVYLSKDIKVLIT 249
Query: 331 DTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEK 390
DT+GFI ++P L+E FK TLE+ ADI++HVVD+S+ +L++ + V + L L+++EK
Sbjct: 250 DTVGFIRDLPHELIESFKATLEELQEADILLHVVDISDKKWLEKIKVVRKVLAELKVDEK 309
Query: 391 ILEHVLVVGNKVDAVPPGERVTE---------EYDLLISATRGTGLAQLKEKVQDMI 438
L V NK D + E+ E E ++ISA +G G+ +L +++M+
Sbjct: 310 ---PTLYVFNKADKLVESEQDIELLTEPAFLGEKSVVISAQKGWGIKKLLSTIKEMV 363
>gi|385784527|ref|YP_005760700.1| hypothetical protein SLUG_15880 [Staphylococcus lugdunensis
N920143]
gi|418414201|ref|ZP_12987417.1| GTP-binding protein HflX [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|339894783|emb|CCB54079.1| conserved hypothetical protein [Staphylococcus lugdunensis N920143]
gi|410877839|gb|EKS25731.1| GTP-binding protein HflX [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 412
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 161/307 (52%), Gaps = 15/307 (4%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D + E +AL + Q VV + D K + GKG ++ +K + D V V+
Sbjct: 32 DSTMQELQALSQTCQ-LEVVSQITQNRQQVDHKYYVGKGKIDEIKAFI--DLHDIDVVVA 88
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY---- 223
D L Q K L D V + DR ++++IF AK++E +LQ+ +A+L YL R
Sbjct: 89 NDELTTAQSKSLNDALDVKIIDRTQLILEIFALRAKSKEGKLQVELAQLDYLLPRLQGHG 148
Query: 224 ----RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
R + L+ R + R ++K L + RE RNK+++ + +
Sbjct: 149 KSLSRLGGGIGTRGPGETKLEMDRRHIRTRINEIKHQLQTIVEHRERYRNKREQNQVFQI 208
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK++ L+ + S +N LFATLD T + L ++ DT+GFI +
Sbjct: 209 ALVGYTNAGKSSWFNVLSGE-STYEQNLLFATLDPKTRQIQLNEGFNVIITDTVGFIQKL 267
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PTTL+ FK TLE+A ADI++H+VD S+P++ Q + V++ +Q L++++ + V V+
Sbjct: 268 PTTLVAAFKSTLEEAKNADILLHIVDASHPEFRSQYETVNQLIQELDMDQ--IPQV-VLF 324
Query: 400 NKVDAVP 406
NK D P
Sbjct: 325 NKRDLCP 331
>gi|253996263|ref|YP_003048327.1| GTP-binding proten HflX [Methylotenera mobilis JLW8]
gi|253982942|gb|ACT47800.1| GTP-binding proten HflX [Methylotenera mobilis JLW8]
Length = 378
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 186/363 (51%), Gaps = 37/363 (10%)
Query: 83 GTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSF 142
G D + V F + + R L+ A++ ++G R V D K F
Sbjct: 10 GGDAAILVSVDFGENDYQESLEELRQLSLSAGLAVLGKVEGKRSVP---------DAKLF 60
Query: 143 FGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHA 202
G G + L + ++ AVF + D L QQ+ L+ L Q V DR +++ IF A
Sbjct: 61 IGSGKADELAQMMQATESHVAVF-NHD-LTPSQQRNLERLLQARVVDRTGLILDIFSQRA 118
Query: 203 KTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQ 251
+T E +LQ+ +A+L +L TR + T++ KG L+ R +L R +
Sbjct: 119 QTHEGKLQVELAQLEHLSTRL--VRGWTHLERQKGGIGVRGGPGETQLELDRRMLRVRVK 176
Query: 252 KLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFAT 311
+L++ L KLK QR M R ++R TV++VGYTN GK+T+ LT + + +QLFAT
Sbjct: 177 QLREKLLKLKAQRGMQRRARKRSNVMTVSLVGYTNAGKSTIFNRLTKAN-IYAADQLFAT 235
Query: 312 LDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDY 371
LD TTH+ + ++ DT+GFI ++P L+E F TLE+A+ AD+++H+VD ++ +
Sbjct: 236 LDTTTHKIYIEGCGSVVLSDTVGFIKHLPHALVEAFGATLEEAVQADLLLHIVDTASTNR 295
Query: 372 LQQKQHVDETLQHLELEEKILEHVLVVGNKVDAV---PPGERVTEEY----DLLISATRG 424
+Q V++ L + E + +LV N++D V P R +EY L +SA G
Sbjct: 296 DEQIAQVNKVLHEIGASE--VPQILVY-NQIDRVGLEPAIGR--DEYGRITSLHVSAKTG 350
Query: 425 TGL 427
GL
Sbjct: 351 EGL 353
>gi|149575357|ref|XP_001518948.1| PREDICTED: putative GTP-binding protein 6-like, partial
[Ornithorhynchus anatinus]
Length = 169
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 115/171 (67%), Gaps = 5/171 (2%)
Query: 289 KTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFK 348
KT+LI+ALT D + PR+Q FATLD+T + G LP+RL ++YVDTIGF+S +P L+ F
Sbjct: 1 KTSLIRALTGDPAAEPRDQPFATLDITAYAGALPSRLTVIYVDTIGFLSQLPHALIGSFS 60
Query: 349 VTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG 408
TLED AD+IIHV DVS+PD + QK V + L++L L +L+ ++ V NKVD +
Sbjct: 61 ATLEDVAHADLIIHVRDVSHPDTVLQKASVLDALRNLRLPRALLDSIVEVHNKVDLM--- 117
Query: 409 ERV--TEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSE 457
+R E + +SA G GL +LK ++ ++LKATGRK +T+++ G++
Sbjct: 118 DRYAPAEPNAVAVSALLGHGLGELKAEIDRVVLKATGRKVLTLKIDLAGAQ 168
>gi|121602372|ref|YP_988930.1| GTP-binding proten HflX [Bartonella bacilliformis KC583]
gi|120614549|gb|ABM45150.1| GTP-binding proten HflX [Bartonella bacilliformis KC583]
Length = 457
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 182/347 (52%), Gaps = 26/347 (7%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR--GDARVTAVFVSVDV 170
E+ L +I G VV I+++ + + FG G +E K+ + + R+ + V +
Sbjct: 47 EALGLARAI-GLDVVHHEIVNITTPHPSTLFGSGKVEEFKQVLSHFNEPRIAVLIVDYSL 105
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
+ QQ L+ L+ V DR ++++IF A+T+E LQ+ +A L Y + R + T
Sbjct: 106 TPV-QQCNLEKLWNCKVIDRTALILEIFGDRAQTKEGVLQVELAYLSY--QKGRLVRSWT 162
Query: 231 NMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +G +++ R +L ++ ++++ L + R + R +++ P +
Sbjct: 163 HLERQRGGHGFLGGPGETQIEADRRILQDKIVRVRRELKTVIKTRALHRANRKKTCHPVI 222
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL L+ + ++ ++ LFATLD T + LP +L DT+GFISN+
Sbjct: 223 ALVGYTNAGKSTLFNRLSGAN-ILTKDMLFATLDPTLRKITLPYGKTVLLSDTVGFISNL 281
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+ F+ TLE+ + AD+IIHV D+S+PD+ Q V E L L ++ ++ V
Sbjct: 282 PTHLIAAFRATLEEVIEADLIIHVRDISDPDHQFHAQDVLEILSSLGIDINDKGRIIEVW 341
Query: 400 NKVD--------AVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMI 438
NK+D A+ + L++SA G GL QL ++ +I
Sbjct: 342 NKIDILDQHVLNALQMNTKTLLNPALMVSALTGEGLKQLLITIEKLI 388
>gi|16330625|ref|NP_441353.1| GTP-binding protein HflX [Synechocystis sp. PCC 6803]
gi|383322366|ref|YP_005383219.1| GTP-binding protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383325535|ref|YP_005386388.1| GTP-binding protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383491419|ref|YP_005409095.1| GTP-binding protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384436686|ref|YP_005651410.1| GTP-binding protein [Synechocystis sp. PCC 6803]
gi|451814783|ref|YP_007451235.1| GTP-binding protein HflX [Synechocystis sp. PCC 6803]
gi|1653117|dbj|BAA18033.1| GTP-binding protein; HflX [Synechocystis sp. PCC 6803]
gi|339273718|dbj|BAK50205.1| GTP-binding protein [Synechocystis sp. PCC 6803]
gi|359271685|dbj|BAL29204.1| GTP-binding protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359274855|dbj|BAL32373.1| GTP-binding protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359278025|dbj|BAL35542.1| GTP-binding protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407958552|dbj|BAM51792.1| GTP-binding protein HflX [Synechocystis sp. PCC 6803]
gi|451780752|gb|AGF51721.1| GTP-binding protein HflX [Synechocystis sp. PCC 6803]
Length = 534
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 167/317 (52%), Gaps = 23/317 (7%)
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
++ G+G +E L V+ VF D L Q + L+ V V DR +++ IF
Sbjct: 219 QTVVGEGKVEELALAVQTTGANLVVF-DRD-LSAAQVRNLEQRCGVRVIDRTELILDIFA 276
Query: 200 AHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQ 251
A++R +LQ+ +A+L YL + R + L+++R + R
Sbjct: 277 QRAQSRAGKLQVELAQLEYLLPKLVGRGQGMSRLGGGIGTRGPGETKLETERRTIQSRIA 336
Query: 252 KLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFAT 311
KL+K +N+L+ R +RN++Q+Q PTVA+VGYTN GK+TL+ ALT D + +QLFAT
Sbjct: 337 KLQKQVNELQSHRSRLRNQRQQQAVPTVAIVGYTNAGKSTLLNALTQAD-IYAADQLFAT 395
Query: 312 LDVTTHEGML--PNRLR---ILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
LD TT L P IL DT+GFI +P L++ F+ TLE+ AD+++ VVD+
Sbjct: 396 LDPTTRRLSLLDPENQTYHPILLTDTVGFIHKLPDALVDAFRATLEEVTEADLLLQVVDL 455
Query: 367 SNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD----LLISAT 422
S+ + +Q V L + L +++V NK+D VP + D + ++A
Sbjct: 456 SDRAWRRQIASVANILAEMPLATA---PMVMVFNKIDQVPSEALAAAQADYPEAIFLAAA 512
Query: 423 RGTGLAQLKEKVQDMIL 439
+G GL LK+++ + IL
Sbjct: 513 QGIGLETLKKRLLEQIL 529
>gi|289550899|ref|YP_003471803.1| GTP-binding protein HflX [Staphylococcus lugdunensis HKU09-01]
gi|289180431|gb|ADC87676.1| GTP-binding protein HflX [Staphylococcus lugdunensis HKU09-01]
Length = 412
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 161/307 (52%), Gaps = 15/307 (4%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D + E +AL + Q VV + D K + GKG ++ +K + D V V+
Sbjct: 32 DSTMQELQALSQTCQ-LEVVSQITQNRQQVDHKYYVGKGKIDEIKAFI--DLHDIDVVVA 88
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY---- 223
D L Q K L D V + DR ++++IF AK++E +LQ+ +A+L YL R
Sbjct: 89 NDELTTAQSKSLNDALDVKIIDRTQLILEIFALRAKSKEGKLQVELAQLDYLLPRLQGHG 148
Query: 224 ----RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
R + L+ R + R ++K L + RE RNK+++ + +
Sbjct: 149 KSLSRLGGGIGTRGPGETKLEMDRRHIRTRINEIKHQLQTIVEHRERYRNKREQNQVFQI 208
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK++ L+ + S +N LFATLD T + L ++ DT+GFI +
Sbjct: 209 ALVGYTNAGKSSWFNVLSGE-STYEQNLLFATLDPKTRQIQLNEGFNVIITDTVGFIQKL 267
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PTTL+ FK TLE+A ADI++H+VD S+P++ Q + V++ +Q L++++ + V V+
Sbjct: 268 PTTLVAAFKSTLEEAKNADILLHIVDASHPEFRSQYETVNQLIQELDMDQ--IPQV-VLF 324
Query: 400 NKVDAVP 406
NK D P
Sbjct: 325 NKRDLCP 331
>gi|421760732|ref|ZP_16197546.1| GTP-binding protein HflX [Bartonella bacilliformis INS]
gi|411174500|gb|EKS44532.1| GTP-binding protein HflX [Bartonella bacilliformis INS]
Length = 458
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 182/347 (52%), Gaps = 26/347 (7%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR--GDARVTAVFVSVDV 170
E+ L +I G VV I+++ + + FG G +E K+ + + R+ + V +
Sbjct: 48 EALGLARAI-GLDVVHHEIVNITTPHPSTLFGSGKVEEFKQVLSHFNEPRIAVLIVDYSL 106
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
+ QQ L+ L+ V DR ++++IF A+T+E LQ+ +A L Y + R + T
Sbjct: 107 TPV-QQCNLEKLWNCKVIDRTALILEIFGDRAQTKEGVLQVELAYLSY--QKGRLVRSWT 163
Query: 231 NMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ +G +++ R +L ++ ++++ L + R + R +++ P +
Sbjct: 164 HLERQRGGHGFLGGPGETQIEADRRILQDKIVRVRRELKTVIKTRALHRANRKKTCHPVI 223
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK+TL L+ + ++ ++ LFATLD T + LP +L DT+GFISN+
Sbjct: 224 ALVGYTNAGKSTLFNRLSGAN-ILTKDMLFATLDPTLRKITLPYGKTVLLSDTVGFISNL 282
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
PT L+ F+ TLE+ + AD+IIHV D+S+PD+ Q V E L L ++ ++ V
Sbjct: 283 PTHLIAAFRATLEEVIEADLIIHVRDISDPDHQFHAQDVLEILSSLGIDINDKGRIIEVW 342
Query: 400 NKVD--------AVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMI 438
NK+D A+ + L++SA G GL QL ++ +I
Sbjct: 343 NKIDILDQHVLNALQMNTKTLLNPALMVSALTGEGLKQLLITIEKLI 389
>gi|159899445|ref|YP_001545692.1| GTP1/OBG protein [Herpetosiphon aurantiacus DSM 785]
gi|159892484|gb|ABX05564.1| GTP1/OBG protein [Herpetosiphon aurantiacus DSM 785]
Length = 444
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 182/355 (51%), Gaps = 39/355 (10%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSV---DVLK 172
AL++ G VV + L + K++ G G + R+V D R + V + L
Sbjct: 43 ALLADTAGLEVVGTVSQKLDHPNPKTYIGPGKV----REV-ADLRSETPYDVVIFDEELS 97
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYR-------- 224
Q + L++ +V V DR +++ IF HA+TRE LQ+ +A+ YL R R
Sbjct: 98 PSQARNLEEAIKVKVIDRTTLILDIFAQHARTREGSLQVELAQYDYLLPRLRRAWTHLER 157
Query: 225 ----TIEDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
+ +G L+S + ++ +R LK+ L + RE+ R +Q
Sbjct: 158 QSGGGGGGSGVGVGLRGPGETQLESDQRIIGKRIALLKEQLADVHRHRELYRQNRQESGL 217
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P ++VVGYTN GK+TL+ L D L + LFATLD TT + LP +L DT+GFI
Sbjct: 218 PIISVVGYTNAGKSTLLNRLAQADVLAA-DMLFATLDPTTRKVALPGGRAVLMTDTVGFI 276
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVL 396
+PT L+ F+ TLE+ AD+++HV+D+++ + +Q + V +TL L++++K +L
Sbjct: 277 QRLPTALVAAFRATLEEIAEADVLLHVLDLTHANVEEQFKTVIDTLSELKVQDK---PIL 333
Query: 397 VVGNKVDAV-PPGE----RVTEEYDL------LISATRGTGLAQLKEKVQDMILK 440
V NK+D + P + R+ E L ISA + G+ +L+ ++ M+++
Sbjct: 334 TVFNKIDKIDSPSDAEIVRMITELGLPIDRWVAISAQQNIGIDRLQTAIEQMLME 388
>gi|408528857|emb|CCK27031.1| GTP-binding protein HflX [Streptomyces davawensis JCM 4913]
Length = 497
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 173/325 (53%), Gaps = 23/325 (7%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V+D I D ++ G G L R + ++ V + L Q L+D+
Sbjct: 110 GALVLDGVIQRRDKPDAATYIGSGKANEL-RDIVLESGADTVICDGE-LSPGQLIHLEDV 167
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI-------- 234
+V V DR +++ IF HAK+RE + Q+A+A++ Y+ R R + + +
Sbjct: 168 VKVKVIDRTALILDIFAQHAKSREGKAQVALAQMQYMLPRLRGWGQSLSRQMGGGKGGGL 227
Query: 235 -TKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGK 289
T+G ++K R + E+ K+++ + ++K RE+ R +++R K P+VA+ GYTN GK
Sbjct: 228 ATRGPGETKIETDRRRIREKMAKMRREIAEMKTGREIKRQERKRNKVPSVAIAGYTNAGK 287
Query: 290 TTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKV 349
++L+ LT LV N LFATLD T P+ DT+GF+ ++P L+E F+
Sbjct: 288 SSLLNRLTGAGVLV-ENALFATLDPTVRRAETPSGRLYTLADTVGFVRHLPHHLVEAFRS 346
Query: 350 TLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP-- 407
T+E+ +D+I+HVVD S+PD +Q V E + + ++ E +VV NK DA P
Sbjct: 347 TMEEVGESDLILHVVDGSHPDPEEQLAAVREVITDVGA-TRVPE--IVVINKADAADPLT 403
Query: 408 GERV--TEEYDLLISATRGTGLAQL 430
+R+ E+ + +SA G G+A+L
Sbjct: 404 LQRLLRIEKRSIAVSARTGQGIAEL 428
>gi|94496399|ref|ZP_01302976.1| GTPase [Sphingomonas sp. SKA58]
gi|94424145|gb|EAT09169.1| GTPase [Sphingomonas sp. SKA58]
Length = 444
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 195/407 (47%), Gaps = 37/407 (9%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D L E++ L +I G V + + + FG G ++ + R + A +
Sbjct: 34 DARLEEARGLALAI-GIDVRAAQAFRVRDLKPATLFGSGQVDQIATLARQE---EAELII 89
Query: 168 VD-VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------L 219
VD L QQ L+ + V DR ++++IF A T E RLQ+ +A L Y
Sbjct: 90 VDNSLSPVQQSNLEKACEAKVIDRTGLILEIFGERAATNEGRLQVELAHLDYQAGRLVRS 149
Query: 220 WT---RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKF 276
WT R R +RM+ +R K+++ L+++ R + R ++QR +
Sbjct: 150 WTHLERQRGGFGFLGGPGETQIEADRRMI-RDRMAKIRRELDQVTRTRGLHRARRQRAPW 208
Query: 277 PTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFI 336
P +A+VGYTN GK+TL LT + ++ + LFATLD T + LP + + DT+GF+
Sbjct: 209 PVIALVGYTNAGKSTLFNRLTGAE-VMAEDLLFATLDPTMRQIALPGLDKAILSDTVGFV 267
Query: 337 SNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELE-EKILEH- 394
S++PT L+ F+ TLE+ + AD+I+HV D+++PD Q+ V + L L + E LE
Sbjct: 268 SDLPTQLIAAFRATLEEVLSADLIVHVRDIAHPDSDAQRDDVLDVLGELGVTGEAALERG 327
Query: 395 --------VLVVGNKVDAVPPG------ERVTEEYDLLI-SATRGTGLAQLKEKVQDMIL 439
++ NK+D + E+ D++I SA G G+ QL+ + D +
Sbjct: 328 EGTSEPPPIIEAWNKLDLLDADSMSLVREQAARREDVVILSALTGEGMDQLQRMISDHMT 387
Query: 440 KATGRKNITMRVRSGGSEYQWLMKHTAV--SNIREDDTSAEHLLLDV 484
+ ++ V G S WL +H V S +D T+ E L D
Sbjct: 388 RGAKVYTFSIPVADGAS-LAWLHEHGEVLRSETGDDMTNVEVRLSDA 433
>gi|455652041|gb|EMF30722.1| ATP/GTP-binding protein [Streptomyces gancidicus BKS 13-15]
Length = 497
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 174/325 (53%), Gaps = 23/325 (7%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V+D I D ++ G G E L R + ++ V + L Q L+D+
Sbjct: 110 GALVLDGVIQRRDKPDAATYIGSGKAEEL-RDIVLESGADTVICDGE-LSPGQLIHLEDV 167
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI-------- 234
+V V DR +++ IF HAK+RE + Q+A+A++ Y+ R R + + +
Sbjct: 168 VKVKVIDRTALILDIFAQHAKSREGKAQVALAQMQYMLPRLRGWGQSLSRQMGGGKGGGL 227
Query: 235 -TKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGK 289
T+G ++K R + E+ K+++ + ++K RE+ R +++R K P+VA+ GYTN GK
Sbjct: 228 ATRGPGETKIETDRRRIREKMAKMRREIAEMKTGREIKRQERKRNKVPSVAIAGYTNAGK 287
Query: 290 TTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKV 349
++L+ LT LV N LFATLD T P+ DT+GF+ ++P L+E F+
Sbjct: 288 SSLLNRLTGAGVLV-ENALFATLDPTVRRAETPSGRLYTLADTVGFVRHLPHHLVEAFRS 346
Query: 350 TLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP-- 407
T+E+ +D+I+HVVD S+P +Q V E ++ + + + E +VV NK DA P
Sbjct: 347 TMEEVGDSDLILHVVDGSHPTPEEQLAAVREVIRDVGATD-VPE--IVVINKADAADPLT 403
Query: 408 GERV--TEEYDLLISATRGTGLAQL 430
+R+ TE+ + +SA G G+ +L
Sbjct: 404 LQRLLRTEKRSIAVSARTGRGIPEL 428
>gi|387902349|ref|YP_006332688.1| GTP-binding protein HflX [Burkholderia sp. KJ006]
gi|387577241|gb|AFJ85957.1| GTP-binding protein HflX [Burkholderia sp. KJ006]
Length = 343
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 166/310 (53%), Gaps = 28/310 (9%)
Query: 142 FFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAH 201
F G G E L+ + DA + + L QQ+ L+ V DR +++ IF
Sbjct: 2 FIGSGKAEELR--LACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILDIFAQR 59
Query: 202 AKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLMEREQ 251
A++ E +LQ+ +A+L YL TR I T++ KG L++ R ++ ER +
Sbjct: 60 ARSHEGKLQVELAQLQYLSTRL--IRAWTHLERQKGGIGLRGPGETQLETDRRLIGERIK 117
Query: 252 KLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFAT 311
LK L++L+ Q R ++ R +V++VGYTN GK+TL ALT + +QLFAT
Sbjct: 118 MLKARLDRLRRQHSTQRRQRARSGTMSVSLVGYTNAGKSTLFNALTKAQAYAA-DQLFAT 176
Query: 312 LDVTTHEGMLPNRL-RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPD 370
LD T+ L + + +I+ DT+GFI +P L+ F+ TLE+ + AD+++HVVD S+
Sbjct: 177 LDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVVDASSAV 236
Query: 371 YLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP----GERVT-EEYD----LLISA 421
L+Q + V++ L E+ + VLV NK+DAVP G+ V +EY + +SA
Sbjct: 237 RLEQIEQVNDVLH--EIGADTVRQVLVF-NKIDAVPELAARGDAVERDEYGNISRVFLSA 293
Query: 422 TRGTGLAQLK 431
G GL L+
Sbjct: 294 RTGQGLDALR 303
>gi|409198434|ref|ZP_11227097.1| GTP-binding protein HflX [Marinilabilia salmonicolor JCM 21150]
Length = 403
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 169/325 (52%), Gaps = 18/325 (5%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G V + SL DK+ F G G LE + V+ V ++ D L Q
Sbjct: 37 AFLAETAGAIPVKRFVQSLPMPDKRYFVGSGKLEEIVEYVKVHEDVDSIIFD-DELTPSQ 95
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYL-------WTRYRTIED 228
+ L+ F+ + DR +++ IF A+T A+ Q+ +A+ YL WT
Sbjct: 96 LRNLEGAFRRRILDRTNLILDIFARRARTAHAKTQVELAQYQYLLPRLTRMWTHLERQRG 155
Query: 229 ATNM-NITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNC 287
M + +++ R ++ ++ KLK L K+ R+M +K R K VA+VGYTN
Sbjct: 156 GIGMRGPGEKEIETDRRIIRDKISKLKNDLQKI--DRQMATQRKNRGKLVRVALVGYTNV 213
Query: 288 GKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
GK+TL+ L + + N+LFATLD T + ++ N L L DT+GFI +P L+E F
Sbjct: 214 GKSTLMNTLAKSE-VFAENKLFATLDTTVRKVVVGN-LPFLLADTVGFIRKLPHHLVESF 271
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP 407
K TL++ ADI++HVVD+S+P + QQ + V++TL ++ EK + ++V NKVDA
Sbjct: 272 KSTLDEVREADILLHVVDISHPGFEQQIEVVNKTLHEIDEREKPM---VMVFNKVDAFTY 328
Query: 408 GERVTEEYDLLISATRGTGLAQLKE 432
E+ EE DL L LKE
Sbjct: 329 TEK--EEDDLTPETRENYSLDDLKE 351
>gi|260575069|ref|ZP_05843070.1| GTP-binding proten HflX [Rhodobacter sp. SW2]
gi|259022691|gb|EEW25986.1| GTP-binding proten HflX [Rhodobacter sp. SW2]
Length = 412
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 186/364 (51%), Gaps = 34/364 (9%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAV---FVSVD-VLKLHQQKMLQD 181
VV S ++ + + FG G ++ LK AR A+ V VD + QQ+ L+
Sbjct: 34 VVGSEVVRVGRMQPGTLFGSGKVDELK------ARFAALEVDLVLVDGPVSPVQQRNLEK 87
Query: 182 LFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF--- 238
+ V + DR ++++IF A+TRE +Q+ +A L Y R R + T++ +G
Sbjct: 88 AWGVKLLDRTGLILEIFADRARTREGVMQVELAALSY--QRTRLVRAWTHLERQRGGFGF 145
Query: 239 --------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKT 290
+++ R + ++ ++K+ L K+ RE+ R ++R FP VA+VGYTN GK+
Sbjct: 146 VGGPGETQIEADRRAIDDQVIRIKRQLEKVVKTRELHRAARRRVPFPLVALVGYTNAGKS 205
Query: 291 TLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVT 350
TL +T + L ++ LFATLD T +LP+ +I+ DT+GFIS++PT L+ F+ T
Sbjct: 206 TLFNRMTGAEVLA-KDMLFATLDPTMRGLVLPSGRKIIISDTVGFISDLPTQLVAAFRAT 264
Query: 351 LEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGER 410
LE+ + AD+I+HV D+S+P+ +Q V + L L + K + + NK+D V R
Sbjct: 265 LEEVLEADLILHVRDISHPESAEQAADVAKILAALGV--KAATPQIEIWNKLDLVQGAMR 322
Query: 411 -------VTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMK 463
+ + +SA G GL +L E + +A +T+ S G + WL
Sbjct: 323 DGLVQQAQGRDGVMALSALTGEGLPELLEAISRAFDEAKSDLRLTLPF-SEGRRHAWLHA 381
Query: 464 HTAV 467
V
Sbjct: 382 EGVV 385
>gi|222151146|ref|YP_002560300.1| hypothetical protein MCCL_0897 [Macrococcus caseolyticus JCSC5402]
gi|222120269|dbj|BAH17604.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 425
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 191/393 (48%), Gaps = 24/393 (6%)
Query: 101 MKRNTTRDFMLAESKALVSSI---QGWRVVDSTIISLLSFDKKSFFGKGNLE-LLKRQVR 156
+K+N DF ES + S+ G V + I + D + GKG LE +++ + R
Sbjct: 18 LKKND--DFNFGESLEEIKSLCHTAGIEVTEVVIQNKDRVDNSYYIGKGKLEEIVELKER 75
Query: 157 GDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAEL 216
D V V+ + L Q K L ++ + DR +++ IF AK+RE +LQ+ +A+L
Sbjct: 76 EDIAFDMVVVN-NELTTSQSKHLNEVLDCKIIDRTQLILDIFAQRAKSREGKLQVELAQL 134
Query: 217 PYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMR 268
YL R R + L+ R + R +K L +K R+ R
Sbjct: 135 EYLLPRLSGHGLSLSRLGGGIGTRGPGETKLEMNRRHIRSRIHDIKLQLETIKQHRQRYR 194
Query: 269 NKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRIL 328
++++ VA+VGYTN GK+T AL+D D+ + + LFATLD + L +L
Sbjct: 195 ENRKKRNIFQVALVGYTNAGKSTWFNALSDSDTYM-EDLLFATLDPKSKMMKLHEGYPVL 253
Query: 329 YVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL-EL 387
DT+GFI +PT L+E F TLE+A ADI+IHVVD S+P+Y+ H+D + L EL
Sbjct: 254 LSDTVGFIQQLPTHLIEAFSSTLEEAKYADILIHVVDRSHPNYM---NHIDTVIALLKEL 310
Query: 388 EEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNI 447
+ + VL + NK D + + +LL+S ++ K+ DM+ + + I
Sbjct: 311 DMDTIP-VLTLLNKKDKLESFVTAAGKDELLVSVFDKQDKIHIQNKLIDMMQRNMSKYAI 369
Query: 448 TMRVRSGGSEYQWLMKHTAVS--NIREDDTSAE 478
+ + G +L +HT VS N ED E
Sbjct: 370 EVD-KDAGQIIAFLKEHTLVSAINFNEDKDKYE 401
>gi|433546756|ref|ZP_20503060.1| GTP-binding protein HflX [Brevibacillus agri BAB-2500]
gi|432181976|gb|ELK39573.1| GTP-binding protein HflX [Brevibacillus agri BAB-2500]
Length = 430
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 160/300 (53%), Gaps = 13/300 (4%)
Query: 164 VFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY 223
V + D L Q + L +F V DR +++ IF A++RE ++Q+ +A+ YL R
Sbjct: 80 VIIFNDELSPSQTRNLDKIFDCKVIDRTQLILDIFAGRAQSREGKIQVELAQYNYLLPRL 139
Query: 224 --------RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQK 275
R + L+S R + +R +LK+ L+ R++ R ++++
Sbjct: 140 AGQGKQLSRLGGGIGTRGPGESKLESDRRHIRKRISELKQQLDDTVRTRQLHRERRKKNN 199
Query: 276 FPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGF 335
+A+VGYTN GK+TL+ LT ++L ++LFATLD TT + +LP+ L +L DT+GF
Sbjct: 200 VFQIALVGYTNAGKSTLLNQLTQANTL-QEDKLFATLDPTTRQLVLPSGLEVLLTDTVGF 258
Query: 336 ISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV 395
I ++PT+L+ F+ TLE AD+I+HVVD +PD + VD+ L+ L+ EE
Sbjct: 259 IQDLPTSLVAAFRSTLEGVKEADLILHVVDSHHPDLRVHMEVVDKILRELKAEEI---PQ 315
Query: 396 LVVGNKVDAVPPGERVTE-EYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG 454
LVV NK D + G + + +L+SA R +L +++ +L + + + V G
Sbjct: 316 LVVFNKADLLTEGAYLPHADESILVSAIREEDQQRLLARIEQFVLSSYNEMKLRVPVERG 375
>gi|403530433|ref|YP_006664962.1| GTP-binding protein hflX [Bartonella quintana RM-11]
gi|403232505|gb|AFR26248.1| GTP-binding protein hflX [Bartonella quintana RM-11]
Length = 447
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 157/291 (53%), Gaps = 36/291 (12%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
QQ+ L+ L+ V DR ++++IF A+T+E LQ+ +A L Y + R + T++
Sbjct: 107 QQRNLEKLWNCKVIDRTALILEIFGDRARTKEGVLQVELAHLSY--QKSRLVRSWTHLER 164
Query: 235 TKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVG 283
+G +++ R +L E+ ++++ L + R + R K+++ P VA+VG
Sbjct: 165 QRGGCGFLGGPGETQIEADRRLLQEKIIRIRRELETVIKTRALHRAKRKKTSHPVVALVG 224
Query: 284 YTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTL 343
YTN GK+TL L+ D+L ++ LFATLD + +LP+ IL DT+GFISN+PT L
Sbjct: 225 YTNTGKSTLFNRLSGADALA-KDMLFATLDPIVRKVILPHGKTILLSDTVGFISNLPTNL 283
Query: 344 LEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+ F+ TLE+ + AD+I+HV D+S+ D+ Q V E L L ++ EH++ V NK+D
Sbjct: 284 IAAFRATLEEVVEADLILHVRDMSDLDHRAHAQDVLEVLSGLGIDTDDTEHIIEVWNKID 343
Query: 404 AVPPGERVTEEYDL---------------LISATRGTGLAQLKEKVQDMIL 439
+ +EY L ++SA + GL QL ++ I
Sbjct: 344 -------ILDEYALNVLQTSVKTRLNPAVMVSALKSDGLDQLLAAIEKRIF 387
>gi|297796713|ref|XP_002866241.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
gi|297312076|gb|EFH42500.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
Length = 541
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 164/319 (51%), Gaps = 20/319 (6%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G VV ST L S + +++ G G + +K + T +F D L Q + L+
Sbjct: 150 GLAVVGSTYQKLASPNPRTYIGSGKVAEIKSAINALDVETVIFD--DELSPGQLRNLEKA 207
Query: 183 F--QVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWTRYRTIEDATNMN 233
F V V DR +++ IF A T EA LQ+A+A++ Y +WT
Sbjct: 208 FGGDVRVCDRTALILDIFNQRAATHEAALQVALAQMEYQLPRLTRMWTHLERQSGGQVKG 267
Query: 234 ITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLI 293
+ + ++ + +L + LKK L ++ R+ R+++ P V++VGYTN GK+TL+
Sbjct: 268 MGEKQIEVDKRILRTQIGVLKKELESVRKHRKQYRSRRVAIPVPVVSLVGYTNAGKSTLL 327
Query: 294 KALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLED 353
LT + L N+LFATLD TT + N L DT+GFI +PTTL+ F+ TLE+
Sbjct: 328 NQLTGANVLA-ENRLFATLDPTTRRVQMQNGKEFLLTDTVGFIQKLPTTLVAAFRATLEE 386
Query: 354 AMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTE 413
+ +++HVVD+S+P QQ + V++ + L++ LVV NKVD V ++V
Sbjct: 387 IAESSLLVHVVDISHPLAEQQIEAVEKVMSELDVSSI---PKLVVWNKVDRVDDPQKVKL 443
Query: 414 EYD-----LLISATRGTGL 427
E + + ISA G GL
Sbjct: 444 EAEKSGDTICISALTGEGL 462
>gi|383639225|ref|ZP_09951631.1| ATP/GTP-binding protein [Streptomyces chartreusis NRRL 12338]
Length = 497
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 173/325 (53%), Gaps = 23/325 (7%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V+D I D ++ G G E L R + ++ V + L Q L+D+
Sbjct: 110 GALVLDGVIQRRDKPDAATYIGSGKAEEL-RDIVLESGADTVICDGE-LSPGQLIHLEDV 167
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI-------- 234
+V V DR +++ IF HAK+RE + Q+A+A++ Y+ R R + + +
Sbjct: 168 VKVKVIDRTALILDIFAQHAKSREGKAQVALAQMQYMLPRLRGWGQSLSRQMGGGKGGGL 227
Query: 235 -TKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGK 289
T+G ++K R + E+ K+++ + +K RE+ R +++R K P+VA+ GYTN GK
Sbjct: 228 ATRGPGETKIETDRRRIREKMAKMRREIADMKTGREIKRQERKRHKVPSVAIAGYTNAGK 287
Query: 290 TTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKV 349
++L+ LT LV N LFATLD T P+ DT+GF+ ++P L+E F+
Sbjct: 288 SSLLNRLTGAGVLV-ENALFATLDPTVRRAETPSGRLYTLADTVGFVRHLPHHLVEAFRS 346
Query: 350 TLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP-- 407
T+E+ +D+I+HVVD S+P+ +Q V E ++ + + + E +VV NK DA P
Sbjct: 347 TMEEVGESDLILHVVDGSHPNPEEQLAAVREVIRDVGATD-VPE--IVVINKADAADPLT 403
Query: 408 GERV--TEEYDLLISATRGTGLAQL 430
+R+ E+ + +SA G G+ QL
Sbjct: 404 LQRLLRVEKRSMAVSARTGQGIDQL 428
>gi|402822216|ref|ZP_10871714.1| GTP-binding protein HflX [Sphingomonas sp. LH128]
gi|402264240|gb|EJU14105.1| GTP-binding protein HflX [Sphingomonas sp. LH128]
Length = 464
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 165/317 (52%), Gaps = 17/317 (5%)
Query: 80 GALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDK 139
G + + VV P ++ + + + + L E++ L +I G VV++ I +
Sbjct: 7 GEVTRGARALVVYPQMRGPRGERNDLDPEARLEEARGLALAI-GLEVVEAMAIVIREARP 65
Query: 140 KSFFGKGNLELLKRQVR-GDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIF 198
+ FG+G ++ + +A + V S+ + QQ+ L++ + V DR ++++IF
Sbjct: 66 GTLFGEGQIQNISTACTLNEAELIIVDGSLSAI---QQRNLEEKLKRKVIDRTGLILEIF 122
Query: 199 KAHAKTREARLQIAIAELPY-------LWT---RYRTIEDATNMNITKGFLDSKRMVLME 248
A T E RLQ+ +A L Y WT R R +RM+ +
Sbjct: 123 GERAATAEGRLQVELAHLDYQAGRLVRSWTHLERQRGGFGFLGGPGETQIEADRRMI-RD 181
Query: 249 REQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQL 308
R K+++ L +++ R + R+++++ +P VA+VGYTN GK+TL LT S++ N L
Sbjct: 182 RMAKIRRELEQVRRTRGLHRDRREKAPWPVVALVGYTNAGKSTLFNRLTGA-SVMAENLL 240
Query: 309 FATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSN 368
FATLD T +P + + DT+GFIS++PT L+ F+ TLE+ AD+I+HV D++N
Sbjct: 241 FATLDPTMRAIRMPGLEKAILSDTVGFISDLPTELIAAFRATLEEVTAADVILHVRDIAN 300
Query: 369 PDYLQQKQHVDETLQHL 385
PD QK+ V + L L
Sbjct: 301 PDTEAQKRQVLDVLADL 317
>gi|16752564|ref|NP_444826.1| GTP-binding protein HflX [Chlamydophila pneumoniae AR39]
gi|7189200|gb|AAF38134.1| GTP-binding protein HflX, putative [Chlamydophila pneumoniae AR39]
Length = 472
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 149/281 (53%), Gaps = 21/281 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ + V DR ++++IF + A T EA +Q+ +A+ YL R + +
Sbjct: 116 QQRNLEKRLGLVVLDRTELILEIFSSRALTAEANIQVQLAQARYLLPRLKRLWGHLSRQK 175
Query: 227 EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
+ KG ++ R ++ ER KL L + QR R K R+ PT A++
Sbjct: 176 SGGGSGGFVKGEGEKQIELDRRMVRERIHKLSAQLKAVIKQRAERRKVKSRRGIPTFALI 235
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ LT D+ V ++LFATLD T + +LP +L DT+GFI +P T
Sbjct: 236 GYTNSGKSTLLNLLTAADTYV-EDKLFATLDPKTRKCVLPGGRHVLLTDTVGFIRKLPHT 294
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+ FK TLE A D+++HVVD S+P L+ Q + Q L++E+ ++ V NKV
Sbjct: 295 LVAAFKSTLEAAFHEDVLLHVVDASHPLALEHVQTTYDLFQELKIEKP---RIITVLNKV 351
Query: 403 DAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMI 438
D +P G R+ +LISA G G+ L + ++I
Sbjct: 352 DRLPQGSIPMKLRLLSPLPVLISAKTGEGIQNLLSLMTEII 392
>gi|49474155|ref|YP_032197.1| GTP-binding protein HflX [Bartonella quintana str. Toulouse]
gi|49239659|emb|CAF26030.1| GTP-binding protein hflX [Bartonella quintana str. Toulouse]
Length = 447
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 157/291 (53%), Gaps = 36/291 (12%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
QQ+ L+ L+ V DR ++++IF A+T+E LQ+ +A L Y + R + T++
Sbjct: 107 QQRNLEKLWNCKVIDRTALILEIFGDRARTKEGVLQVELAHLSY--QKSRLVRSWTHLER 164
Query: 235 TKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVG 283
+G +++ R +L E+ ++++ L + R + R K+++ P VA+VG
Sbjct: 165 QRGGCGFLGGPGETQIEADRRLLQEKIIRIRRELETVIKTRALHRAKRKKTSHPVVALVG 224
Query: 284 YTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTL 343
YTN GK+TL L+ D+L ++ LFATLD + +LP+ IL DT+GFISN+PT L
Sbjct: 225 YTNTGKSTLFNRLSGADAL-EKDMLFATLDPIVRKVILPHGKTILLSDTVGFISNLPTNL 283
Query: 344 LEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+ F+ TLE+ + AD+I+HV D+S+ D+ Q V E L L ++ EH++ V NK+D
Sbjct: 284 IAAFRATLEEVVEADLILHVRDMSDLDHRAHAQDVLEVLSGLGIDTDDTEHIIEVWNKID 343
Query: 404 AVPPGERVTEEYDL---------------LISATRGTGLAQLKEKVQDMIL 439
+ +EY L ++SA + GL QL ++ I
Sbjct: 344 -------ILDEYALNVLQTSVKTRLNPAVMVSALKSDGLDQLLAAIEKRIF 387
>gi|62184900|ref|YP_219685.1| GTP-binding protein [Chlamydophila abortus S26/3]
gi|424824953|ref|ZP_18249940.1| putative GTP-binding protein [Chlamydophila abortus LLG]
gi|62147967|emb|CAH63715.1| putative GTP-binding protein [Chlamydophila abortus S26/3]
gi|333410052|gb|EGK69039.1| putative GTP-binding protein [Chlamydophila abortus LLG]
Length = 462
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 181/348 (52%), Gaps = 28/348 (8%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ V V DR ++++IF A T EA LQ+ +A YL R + +
Sbjct: 113 QQRNLEKRLGVVVLDRTELILEIFANRAFTAEAGLQVELARARYLLPRLKRMWGHLSRQK 172
Query: 227 -EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
+ KG ++ R ++ ER KL L ++ QR+ R K+++ P+ A+
Sbjct: 173 SGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTLDLKSVEKQRKEQRKAKEKRGIPSFAL 232
Query: 282 VGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPT 341
+GYTN GK+TL+ LT ++ V ++LFATLD T +LP+ R+L DT+GFI +P
Sbjct: 233 IGYTNSGKSTLLNLLTSAETYV-EDKLFATLDPKTRRCVLPSGQRVLVTDTVGFIRKLPH 291
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNK 401
TL+ FK TLE A+ D+++HVVD S+P + + E L+ L ++ ++ V NK
Sbjct: 292 TLVAAFKSTLEAALHEDVLLHVVDASHPLAFEHIETTQEILKELGVDHP---KIITVLNK 348
Query: 402 VDAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGS 456
+D +P G+ R+ ++ISA G G+ L E + D+I + + + + G
Sbjct: 349 IDELPEGKAPTKLRLLSPRAVVISAKTGEGIQNLLEAMTDIITEGFPQVTLKFSYKDYGK 408
Query: 457 EYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSRKR 504
+ +++ R++D L++D + + + K++ +FI RKR
Sbjct: 409 FTELYDAGLVLAHRRKEDI----LIVDAYLPEELGKKYQ-QFI-MRKR 450
>gi|317472649|ref|ZP_07931964.1| GTP-binding protein HflX [Anaerostipes sp. 3_2_56FAA]
gi|316899826|gb|EFV21825.1| GTP-binding protein HflX [Anaerostipes sp. 3_2_56FAA]
Length = 412
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 164/332 (49%), Gaps = 23/332 (6%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKR---QVRGDARVTAVFVSVDVLKLHQQKML 179
G V S I + ++ GKG +E ++ + D V D L Q L
Sbjct: 40 GAEVAGSIIQAREQIHSGTYVGKGKIEEIRDLLFETEADG-----IVCDDELSPAQLANL 94
Query: 180 QDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATN 231
+ V DR ++++ IF A+T+E ++Q+ +A+L Y T+ R
Sbjct: 95 SQTLDIKVMDRTLVILDIFAKRAQTKEGKIQVELAQLRYRATKLTGKGVSLSRLGGGIGT 154
Query: 232 MNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTT 291
+ L+ R ++ R LK L + RE+ R ++Q+ P V +VGYTN GK+T
Sbjct: 155 RGPGEKKLEMDRRLIRTRISHLKTELAGVIKHREVQRKQRQKNHTPVVCIVGYTNAGKST 214
Query: 292 LIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTL 351
L+ TD ++ +QLFATLD TT L + +L DT+GFI +P L++ FK TL
Sbjct: 215 LLNHFTDA-GVLEEDQLFATLDPTTKSVELNSGQTVLMTDTVGFIRKLPHHLVDAFKSTL 273
Query: 352 EDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG--- 408
E+A +DII+HVVD SNP QQ + V ETL L +++ V+ NK+D
Sbjct: 274 EEAKYSDIILHVVDCSNPFMEQQMEAVYETLGQLGIKDT---PVITAFNKIDRTGKNSLL 330
Query: 409 ERVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
+ V + + ISA GTG + L ++D++ K
Sbjct: 331 KDVRADETVKISAKEGTGTSDLLRVIEDVLKK 362
>gi|152986375|ref|YP_001350991.1| GTP-binding proten HflX [Pseudomonas aeruginosa PA7]
gi|150961533|gb|ABR83558.1| GTP-binding proten HflX [Pseudomonas aeruginosa PA7]
Length = 433
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 175/342 (51%), Gaps = 25/342 (7%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E + LV S G V +S K G G +E L V+ + +F L
Sbjct: 30 EFQELVRSA-GAETVAFVSVSRHQPSAKYLIGSGKVEELHDLVKAENVELVIFNHT--LT 86
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
Q++ L+ F+ V DR +++ IF A+T E +LQ+ +A+L ++ TR + T++
Sbjct: 87 PSQERNLERAFECRVLDRTGLILDIFAQRARTHEGKLQVELAQLEHMSTRL--VRGWTHL 144
Query: 233 NITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
KG L++ R +L R +++K+ L K++ QRE R ++R P V++V
Sbjct: 145 ERQKGGIGLRGPGETQLETDRRLLRVRIRQIKQRLEKVRSQREQARRGRKRADIPAVSLV 204
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL ALT + + NQLFATLD T L + ++ DT+GFI ++P
Sbjct: 205 GYTNAGKSTLFNALTSSE-VYAANQLFATLDPTLRRLQLDDLGPVVLADTVGFIRHLPHK 263
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+E F+ TLE++ AD+++HV+D P+ Q + V L + E + L V NKV
Sbjct: 264 LVEAFRATLEESSNADLLLHVIDAHEPERDAQIEQVLAVLGEIGANELPM---LEVYNKV 320
Query: 403 DAVPPGERVTEEYD------LLISATRGTGLAQLKEKVQDMI 438
D +P E + D + +SA G GL L++ + +++
Sbjct: 321 DLLPSVEPHIQRDDAGKPVRVWLSAQTGEGLDLLRQAIAELL 362
>gi|405980442|ref|ZP_11038781.1| GTP-binding protein HflX [Actinomyces turicensis ACS-279-V-Col4]
gi|404390435|gb|EJZ85504.1| GTP-binding protein HflX [Actinomyces turicensis ACS-279-V-Col4]
Length = 512
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 177/347 (51%), Gaps = 30/347 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLH 174
A ++ G +V+D+ + + D ++ G G + L VR V A V VD L
Sbjct: 103 AALAQTAGSQVLDAVVQKRVKPDPATYLGSGKAKELAGIVRA---VEADTVIVDEELAPS 159
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
Q++ L+D+ V DR +++ IF HAK+RE + Q+ +A+L YL R R D+ +
Sbjct: 160 QRRGLEDVVDAKVVDRTALILDIFAQHAKSREGKAQVELAQLEYLLPRLRGWGDSMSRQA 219
Query: 235 -----------------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
TK LD +R + R KL++ + K++ R R ++R P
Sbjct: 220 GGRVAGGAGIGSRGPGETKIELDRRR--IRTRMAKLREEIRKMEPARRTQRLSRRRGAVP 277
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
+VA+VGYTN GK+TL+ LT LV + LFATLD T + DT+GF+
Sbjct: 278 SVAIVGYTNAGKSTLLNQLTGAGVLV-EDALFATLDPTVRRTQTADGREYTLSDTVGFVR 336
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
N+PT L+E F+ TLE+A AD+++HVVD ++PD + Q + V + L +E I E ++
Sbjct: 337 NLPTQLVEAFRSTLEEAGEADLLVHVVDAAHPDPVGQVEAVHQVLGEIEGALGIPE--II 394
Query: 398 VGNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQDMILK 440
V NK D + R + +S G G+ +L+ ++++ + +
Sbjct: 395 VLNKADLASAEQLALLRTYFPSSVAVSGYTGFGVDELRHRIEEALPR 441
>gi|399002323|ref|ZP_10705011.1| GTP-binding protein HflX [Pseudomonas sp. GM18]
gi|398125098|gb|EJM14587.1| GTP-binding protein HflX [Pseudomonas sp. GM18]
Length = 433
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 174/318 (54%), Gaps = 30/318 (9%)
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
K+ G +E L+ V+ + +F + L Q++ L+ +F+ V DR +++ IF
Sbjct: 56 KTLISSGKVEELRDLVKAEQVDLVIFNHI--LTPSQERNLERIFECRVIDRTGLILDIFA 113
Query: 200 AHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLMER 249
A+T E +LQ+ +A+L Y+ TR + T++ KG L++ R +L R
Sbjct: 114 QRARTHEGKLQVELAQLEYMSTRL--VRGWTHLERQKGGIGLRGPGETQLETDRRLLRIR 171
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
+++K L K++ QRE R ++R PTV++VGYTN GK+TL ++TD D NQLF
Sbjct: 172 LRQIKGRLEKVRSQREQSRRGRKRADIPTVSLVGYTNAGKSTLFNSVTDSDVFAA-NQLF 230
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T L + I+ DT+GFI ++P L+E F+ TLE++ +D+++HV+D P
Sbjct: 231 ATLDPTLRRLELEDLGPIVLADTVGFIRHLPHKLVEAFRATLEESSNSDLLLHVIDAHEP 290
Query: 370 DYLQQKQHVDETLQHLELEE-KILEHVLVVGNKVD---AVPPGERVTEEYD-----LLIS 420
D + Q + V L + ++ ILE V NK+D V P ++ + D + +S
Sbjct: 291 DRMAQIEQVMVVLGEIGAQDLPILE----VYNKLDLLEGVEP--QIQRDADGKPQRVWLS 344
Query: 421 ATRGTGLAQLKEKVQDMI 438
A GTGL LK+ V +++
Sbjct: 345 AKDGTGLDLLKQAVAELL 362
>gi|381203275|ref|ZP_09910382.1| GTP-binding protein HflX [Sphingobium yanoikuyae XLDN2-5]
Length = 443
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 203/422 (48%), Gaps = 52/422 (12%)
Query: 108 DFMLAESKAL-------VSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDAR 160
D L E++ L V + Q +RV D +L FG G ++ + V +
Sbjct: 34 DARLEEARGLALAIGIDVRAAQSFRVRDRKPATL--------FGSGQVDQIATLVNQE-- 83
Query: 161 VTAVFVSVD-VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY- 218
A V VD L QQ L++ V DR ++++IF A T E RLQ+ +A L Y
Sbjct: 84 -EAELVIVDNALTPVQQSNLEEGTGAKVIDRTGLILEIFGERAATNEGRLQVELAHLDYQ 142
Query: 219 ------LWT---RYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRN 269
WT R R +RM+ +R K+++ L+++ R + R
Sbjct: 143 AGRLVRSWTHLERQRGGFGFLGGPGETQIEADRRMI-RDRMAKIRRELDQVTKTRGLHRA 201
Query: 270 KKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILY 329
++QR +P +A+VGYTN GK+TL LT + ++ + LFATLD T + +LP + +
Sbjct: 202 RRQRAPWPVIALVGYTNAGKSTLFNRLTGAE-VMAEDLLFATLDPTMRQIVLPGLDKAIL 260
Query: 330 VDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELE- 388
DT+GF+S++PT L+ F+ TLE+ + ADII+HV D+++PD Q+ V + L L +
Sbjct: 261 SDTVGFVSDLPTQLIAAFRATLEEVLSADIIVHVRDIAHPDTEAQRDDVLDVLSELGVAG 320
Query: 389 EKILEH---------VLVVGNKVD-----AVPPGERVTEEYD--LLISATRGTGLAQLKE 432
E LE ++ NK+D + ++ +D ++ISA G G+ L+
Sbjct: 321 EGALERGDGEADPPPIIEAWNKLDLLDTESAAQAREISARHDDVVIISALTGEGVEGLQR 380
Query: 433 KVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMN 492
+ + + ++ + + + G+ WL +H V R S + +DV ++D +
Sbjct: 381 AISSRLTRGARVHSLRLPI-ADGAALAWLHEHGEVLATR---PSEAEMQVDVRLSDSGLA 436
Query: 493 KF 494
+F
Sbjct: 437 RF 438
>gi|319405766|emb|CBI79389.1| GTP-binding protein HflX [Bartonella sp. AR 15-3]
Length = 444
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 188/367 (51%), Gaps = 30/367 (8%)
Query: 87 QVFVVQPFIKWGKKMKRNTTR---DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFF 143
+V + P +G K ++ +T D + E+ L +I+ V+ II++ + F
Sbjct: 20 RVAIFVPIYSYGYKQQKTSTERSVDSRVREALGLARAIK-LNVIHYEIINIARPCSSTLF 78
Query: 144 GKGNLELLKRQVRGDARVTAVFVSVD-VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHA 202
G + + + ++ VD L QQ+ L+ L+ V DR ++++IF A
Sbjct: 79 KIGKVNEFAHYINEHQIMLSI---VDHFLTPVQQRNLEKLWNCKVIDRTALILEIFGDRA 135
Query: 203 KTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQ 251
+T+E LQ+ +A L Y + R + T++ +G +++ R +L +
Sbjct: 136 RTKEGVLQVELAHLSY--QKSRLVRSWTHLERQRGGSGFLGGPGETQIEADRRLLQNKII 193
Query: 252 KLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFAT 311
+++ L + R + R K+++ P +A+VGYTN GK+TL L++ + L +N LFAT
Sbjct: 194 SIRRELETVVKTRALHRAKRKKIPHPVIALVGYTNAGKSTLFNRLSNSNVLA-KNMLFAT 252
Query: 312 LDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDY 371
LD T + +LP+ +L DT+GFISN+PT L+ F+ TLE+ + AD+I+HV D S+PD+
Sbjct: 253 LDPTLRKIVLPHGQTVLLSDTVGFISNLPTHLIAAFRATLEEVIEADLILHVRDASDPDH 312
Query: 372 LQQKQHVDETLQHLELEEKILEHVLVVGNKVD--------AVPPGERVTEEYDLLISATR 423
Q V E L L ++ ++H++ + NK+D + + L++SA
Sbjct: 313 HAHAQDVVEILSSLGIDINNIDHIVEIWNKIDMLDQHALGVLQTNSKKMLNSVLMMSALT 372
Query: 424 GTGLAQL 430
G G+ QL
Sbjct: 373 GKGVDQL 379
>gi|384449261|ref|YP_005661863.1| putative phage virion morphogenesis protein/GTP binding protein
[Chlamydophila pneumoniae LPCoLN]
gi|269303355|gb|ACZ33455.1| putative phage virion morphogenesis protein/GTP binding protein
[Chlamydophila pneumoniae LPCoLN]
Length = 472
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 149/281 (53%), Gaps = 21/281 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ + V DR ++++IF + A T EA +Q+ +A+ YL R + +
Sbjct: 116 QQRNLEKRLGLVVLDRTELILEIFSSRALTAEANIQVQLAQARYLLPRLKRLWGHLSRQK 175
Query: 227 EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
+ KG ++ R ++ ER KL L + QR R K R+ PT A++
Sbjct: 176 SGGGSGGFVKGEGEKQIELDRRMVRERIHKLSAQLKAVIKQRAERRKVKSRRGIPTFALI 235
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ LT D+ V ++LFATLD T + +LP +L DT+GFI +P T
Sbjct: 236 GYTNSGKSTLLNLLTAADTYV-EDKLFATLDPKTRKCVLPGGRHVLLTDTVGFIRKLPHT 294
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+ FK TLE A D+++HVVD S+P L+ Q + Q L++E+ ++ V NKV
Sbjct: 295 LVAAFKSTLEAAFHEDVLLHVVDASHPLALEHVQTTYDLFQELKIEKP---RIITVLNKV 351
Query: 403 DAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMI 438
D +P G R+ +LISA G G+ L + ++I
Sbjct: 352 DRLPQGSIPMKLRLLSPLPVLISAKTGEGIQNLLSLMTEII 392
>gi|325971939|ref|YP_004248130.1| GTP-binding proten HflX [Sphaerochaeta globus str. Buddy]
gi|324027177|gb|ADY13936.1| GTP-binding proten HflX [Sphaerochaeta globus str. Buddy]
Length = 440
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 158/310 (50%), Gaps = 32/310 (10%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E KALV ++ G + I + + + G G +E +K V +S+DV+
Sbjct: 50 ELKALVDTM-GALTIRVEYIPMRQTNSATLIGSGKVEAIKLLVEE--------LSIDVVI 100
Query: 173 LHQ------QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI 226
Q Q+ L+ + V DR +++QIF A T+EA LQ+ +A L Y R
Sbjct: 101 FDQGINPRVQRNLEKEMETCVIDRDEVILQIFADRAATKEANLQVELARLEYSLPRL--T 158
Query: 227 EDATNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQK 275
TN+N KG L+ R + +R LK L K+ QR + RN++
Sbjct: 159 RRWTNLNRQKGGVKGTKGEGETQLELDRRQIQDRVVALKLLLEKVVQQRNIQRNQRMNGN 218
Query: 276 FPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGF 335
PT A+VGYTN GK++L+ ALT+ LV ++LFATLD TT LP IL DT+GF
Sbjct: 219 IPTGAIVGYTNSGKSSLLNALTNAGVLV-EDKLFATLDPTTRLVKLPGGEEILLSDTVGF 277
Query: 336 ISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV 395
IS++P L++ FK TLE+A AD +I V D S+PD L + L+ L +K
Sbjct: 278 ISDLPHNLVDAFKSTLEEAKYADFLIIVCDASHPDMLANYATTVQVLEELGCTDK---PA 334
Query: 396 LVVGNKVDAV 405
+V+ NK+D V
Sbjct: 335 IVLANKMDKV 344
>gi|15618389|ref|NP_224674.1| GTP binding protein [Chlamydophila pneumoniae CWL029]
gi|15836009|ref|NP_300533.1| GTP binding protein [Chlamydophila pneumoniae J138]
gi|81790065|sp|Q9Z873.1|HFLX_CHLPN RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|4376763|gb|AAD18618.1| GTP Binding Protein [Chlamydophila pneumoniae CWL029]
gi|8978848|dbj|BAA98684.1| GTP binding protein [Chlamydophila pneumoniae J138]
Length = 472
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 149/281 (53%), Gaps = 21/281 (7%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTI-------- 226
QQ+ L+ + V DR ++++IF + A T EA +Q+ +A+ YL R + +
Sbjct: 116 QQRNLEKRLGLVVLDRTELILEIFSSRALTAEANIQVQLAQARYLLPRLKRLWGHLSRQK 175
Query: 227 EDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
+ KG ++ R ++ ER KL L + QR R K R+ PT A++
Sbjct: 176 SGGGSGGFVKGEGEKQIELDRRMVRERIHKLSAQLKAVIKQRAERRKVKSRRGIPTFALI 235
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ LT D+ V ++LFATLD T + +LP +L DT+GFI +P T
Sbjct: 236 GYTNSGKSTLLNLLTAADTYV-EDKLFATLDPKTRKCVLPGGRHVLLTDTVGFIRKLPHT 294
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+ FK TLE A D+++HVVD S+P L+ Q + Q L++E+ ++ V NKV
Sbjct: 295 LVAAFKSTLEAAFHEDVLLHVVDASHPLALEHVQTTYDLFQELKIEKP---RIITVLNKV 351
Query: 403 DAVPPGE-----RVTEEYDLLISATRGTGLAQLKEKVQDMI 438
D +P G R+ +LISA G G+ L + ++I
Sbjct: 352 DRLPQGSIPMKLRLLSPLPVLISAKTGEGIQNLLSLMTEII 392
>gi|158320815|ref|YP_001513322.1| GTP-binding protein HSR1-related [Alkaliphilus oremlandii OhILAs]
gi|158141014|gb|ABW19326.1| GTP-binding protein HSR1-related [Alkaliphilus oremlandii OhILAs]
Length = 429
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 168/329 (51%), Gaps = 21/329 (6%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G +V+ + I S + D F GKG +E +K +F D L Q + L++
Sbjct: 45 GAQVLATAIQSRPAVDVTYFIGKGKVEEIKELCENLEANMVIFN--DELSGSQIRNLEEE 102
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY----RTIEDATNMNITKGF 238
V V DR +++ IF A T+E +LQ+ +A+L Y R R + T+G
Sbjct: 103 IGVDVIDRTALILDIFAQRASTKEGKLQVELAQLKYRMPRLIGLGRQLSQQGAGIGTRGP 162
Query: 239 ----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
L++ R +++R ++ L +++ RE+ R K+ + + P VA+VGYTN GK+TL+
Sbjct: 163 GEKKLETDRRHILKRIDDIESELKEVRKNREVQRGKRSKSEIPIVALVGYTNAGKSTLMN 222
Query: 295 AL-------TDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPF 347
L D + + LFATLDV+ P++L + DT+GF+S +P L+ F
Sbjct: 223 TLLKLSDHHDDTKEVYVEDMLFATLDVSLRRLSFPDKLDFILTDTVGFVSKLPHALVNAF 282
Query: 348 KVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP 407
K TLE+ AD++IHV+D SN +Y QK L L +E K +++ V NK+D +
Sbjct: 283 KATLEEVKYADLLIHVIDASNEEYNLQKDTTLGVLNDLGVENK---NIITVYNKIDKISD 339
Query: 408 GERVTEEYDLL-ISATRGTGLAQLKEKVQ 435
+ +E + + ISA + L EK++
Sbjct: 340 EALLPKEENCIHISAVTHKNIDVLIEKIR 368
>gi|392556670|ref|ZP_10303807.1| protease GTPase subunit [Pseudoalteromonas undina NCIMB 2128]
Length = 427
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 190/378 (50%), Gaps = 33/378 (8%)
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
K F G G E + V+ +F L Q++ L+ + Q V DR +++ IF
Sbjct: 55 KLFVGTGKAEEIAEIVKIHNADVVIFNHQ--LSPSQERNLERVCQCRVLDRTTLILDIFA 112
Query: 200 AHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLMER 249
A+T E +LQ+ +A+L ++ TR I T++ KG L++ R +L R
Sbjct: 113 QRARTHEGKLQVELAQLRHMSTRL--IRGWTHLERQKGGIGLRGPGETQLETDRRLLRAR 170
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
+ ++ L K+ QRE R + R + PTV++VGYTN GK+TL +TD D + +QLF
Sbjct: 171 IKNIRARLAKVAVQREQGRRARTRNEIPTVSLVGYTNAGKSTLFNYITDSD-VYAADQLF 229
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T + + + ++ DT+GFI ++P L+ FK TL + AD+ +HV+DV++P
Sbjct: 230 ATLDPTLRKLDIGDVGSVILADTVGFIRHLPHDLVAAFKATLTETREADLQLHVIDVADP 289
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD---------LLIS 420
+ + V E L+ +E +E L+V NK+DA+ + VT D + +S
Sbjct: 290 RRKENIEQVQEVLKEIEADEV---PQLLVYNKIDAL---DEVTPRIDRDDEGQPIRVWLS 343
Query: 421 ATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHL 480
A G G L E + D++ K + + + + G L +AV N R D+ +
Sbjct: 344 AKTGEGCELLSEAISDLLAKQMLNETLLLAPQYGRLRAS-LFNLSAVHNERFDEQG--NW 400
Query: 481 LLDVVMTDVIMNKFKHEF 498
LLDV + + N+ +F
Sbjct: 401 LLDVRLPMIEWNRLIKDF 418
>gi|354553038|ref|ZP_08972345.1| GTP-binding proten HflX [Cyanothece sp. ATCC 51472]
gi|353554868|gb|EHC24257.1| GTP-binding proten HflX [Cyanothece sp. ATCC 51472]
Length = 527
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 197/378 (52%), Gaps = 35/378 (9%)
Query: 85 DHQVFVVQPFIKWGKKMKRNTTRDFM--LAESKALVSSIQGWRVVDSTIISLLSFD-KKS 141
DH+ V+ G + + + R F LAE + LV + G V TI S ++
Sbjct: 158 DHERVVI-----VGLQTGKMSDRTFAEELAEVERLVETAGGETV--ETIQQKRSHPHPQT 210
Query: 142 FFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAH 201
GKG +E + +V+ VF S+D L Q + L+ V V DR +++ IF
Sbjct: 211 VVGKGKVEEIALRVQTLGANLVVF-SID-LSPAQVRNLETQLGVKVIDRTEVILDIFAQR 268
Query: 202 AKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQKL 253
A++R +LQ+ +A+L Y+ R R + L+++R + R +L
Sbjct: 269 AQSRAGKLQVELAQLEYMLPRLVGRGQAMSRLGGGIGTRGPGETKLETERRSIQRRISRL 328
Query: 254 KKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLD 313
++ +NKL+ R +R ++Q+Q+ PT+A+VGYTN GK+TLI ALT+ + + +QLFATLD
Sbjct: 329 QQEVNKLQSHRSRLRQQRQKQEVPTIAIVGYTNAGKSTLINALTNAE-VYTADQLFATLD 387
Query: 314 VTTH-----EGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSN 368
TT + L DT+GFI +P +L++ F+ TLE+ AD ++H+VD+S+
Sbjct: 388 PTTRRLSGVDSDTQQPYTFLLTDTVGFIHELPPSLVDAFRATLEEVTEADALLHLVDLSH 447
Query: 369 PDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERV---TEEYDL--LISATR 423
P + Q V LQ + L + +L+V NK+D V GE + EEY L ISA++
Sbjct: 448 PAWQHHIQSVMTILQEMPL---VPGPILLVFNKIDTV-DGETLRIAQEEYPLAVFISASQ 503
Query: 424 GTGLAQLKEKVQDMILKA 441
GL L+ K+ ++ A
Sbjct: 504 RLGLETLRYKLSQLVQYA 521
>gi|172036243|ref|YP_001802744.1| GTP-binding protein [Cyanothece sp. ATCC 51142]
gi|171697697|gb|ACB50678.1| GTP-binding protein [Cyanothece sp. ATCC 51142]
Length = 530
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 197/378 (52%), Gaps = 35/378 (9%)
Query: 85 DHQVFVVQPFIKWGKKMKRNTTRDFM--LAESKALVSSIQGWRVVDSTIISLLSFD-KKS 141
DH+ V+ G + + + R F LAE + LV + G V TI S ++
Sbjct: 161 DHERVVI-----VGLQTGKMSDRTFAEELAEVERLVETAGGETV--ETIQQKRSHPHPQT 213
Query: 142 FFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAH 201
GKG +E + +V+ VF S+D L Q + L+ V V DR +++ IF
Sbjct: 214 VVGKGKVEEIALRVQTLGANLVVF-SID-LSPAQVRNLETQLGVKVIDRTEVILDIFAQR 271
Query: 202 AKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQKL 253
A++R +LQ+ +A+L Y+ R R + L+++R + R +L
Sbjct: 272 AQSRAGKLQVELAQLEYMLPRLVGRGQAMSRLGGGIGTRGPGETKLETERRSIQRRISRL 331
Query: 254 KKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLD 313
++ +NKL+ R +R ++Q+Q+ PT+A+VGYTN GK+TLI ALT+ + + +QLFATLD
Sbjct: 332 QQEVNKLQSHRSRLRQQRQKQEVPTIAIVGYTNAGKSTLINALTNAE-VYTADQLFATLD 390
Query: 314 VTTH-----EGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSN 368
TT + L DT+GFI +P +L++ F+ TLE+ AD ++H+VD+S+
Sbjct: 391 PTTRRLSGVDSDTQQPYTFLLTDTVGFIHELPPSLVDAFRATLEEVTEADALLHLVDLSH 450
Query: 369 PDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERV---TEEYDL--LISATR 423
P + Q V LQ + L + +L+V NK+D V GE + EEY L ISA++
Sbjct: 451 PAWQHHIQSVMTILQEMPL---VPGPILLVFNKIDTV-DGETLRIAQEEYPLAVFISASQ 506
Query: 424 GTGLAQLKEKVQDMILKA 441
GL L+ K+ ++ A
Sbjct: 507 RLGLETLRYKLSQLVQYA 524
>gi|15242912|ref|NP_200604.1| GTP-binding protein, HflX [Arabidopsis thaliana]
gi|9758365|dbj|BAB08866.1| GTP binding protein-like [Arabidopsis thaliana]
gi|332009595|gb|AED96978.1| GTP-binding protein, HflX [Arabidopsis thaliana]
Length = 540
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 164/319 (51%), Gaps = 20/319 (6%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G VV ST L S + +++ G G + +K + T +F D L Q + L+
Sbjct: 149 GLAVVGSTYQKLASPNPRTYIGSGKVAEIKSAINALDVETVIFD--DELSPGQLRNLEKA 206
Query: 183 F--QVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWTRYRTIEDATNMN 233
F V V DR +++ IF A T EA LQ+A+A++ Y +WT
Sbjct: 207 FGGDVRVCDRTALILDIFNQRAATHEAALQVALAQMEYQLPRLTRMWTHLERQSGGQVKG 266
Query: 234 ITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLI 293
+ + ++ + +L + LKK L ++ R+ R+++ P V++VGYTN GK+TL+
Sbjct: 267 MGEKQIEVDKRILRTQIGVLKKELESVRKHRKQYRSRRVAIPVPVVSLVGYTNAGKSTLL 326
Query: 294 KALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLED 353
LT + L N+LFATLD TT + N L DT+GFI +PTTL+ F+ TLE+
Sbjct: 327 NQLTGANVLA-ENRLFATLDPTTRRVQMQNGKEFLLTDTVGFIQKLPTTLVAAFRATLEE 385
Query: 354 AMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTE 413
+ +++HVVD+S+P QQ + V++ + L++ LVV NKVD V ++V
Sbjct: 386 IAESSLLVHVVDISHPLAEQQIEAVEKVMSELDVSSI---PKLVVWNKVDRVDDPQKVKL 442
Query: 414 EYD-----LLISATRGTGL 427
E + + ISA G GL
Sbjct: 443 EAEETGDTICISALTGEGL 461
>gi|167836403|ref|ZP_02463286.1| GTP-binding protein HflX [Burkholderia thailandensis MSMB43]
Length = 392
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 168/316 (53%), Gaps = 28/316 (8%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D F G G E L+ + +A + + L QQ+ L+ + V DR +++
Sbjct: 49 SPDAAMFVGSGKAEELR--LACEANDVEIVIFNHALAPAQQRNLERMLNRRVVDRTSLIL 106
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMV 245
IF A++ E +LQ+ +A+L YL TR I T++ KG L++ R +
Sbjct: 107 DIFAQRARSHEGKLQVELAQLQYLATRL--IRAWTHLERQKGGIGLRGPGETQLETDRRL 164
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR 305
+ ER + LK L++L+ Q R ++ R +V++VGYTN GK+TL ALT +
Sbjct: 165 IGERIKMLKSRLDRLRRQHHTQRRQRARSGAMSVSLVGYTNAGKSTLFNALTKAQAYAA- 223
Query: 306 NQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
+QLFATLD T+ L + + +I+ DT+GFI +P L+ F+ TLE+ + AD+++HVV
Sbjct: 224 DQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVV 283
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP-----GERVTEEYD--- 416
D S+ L+Q + V++ L+ E+ + VLV NK+DAVP G +EY
Sbjct: 284 DASSAVRLEQIEQVNDVLR--EIGADSIRQVLVF-NKIDAVPELAARGGAVERDEYGNIS 340
Query: 417 -LLISATRGTGLAQLK 431
+ +SA G GL L+
Sbjct: 341 RVFLSARTGQGLDSLR 356
>gi|304387463|ref|ZP_07369654.1| GTP-binding protein HflX [Neisseria meningitidis ATCC 13091]
gi|304338556|gb|EFM04675.1| GTP-binding protein HflX [Neisseria meningitidis ATCC 13091]
Length = 392
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 169/350 (48%), Gaps = 29/350 (8%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKS---FFGKGNLELLKRQVRGDARVTAVFVS 167
LAE+ LV + G D ++ D+ F G G L V D VF
Sbjct: 44 LAEAVELVKAAGG----DPVLVETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNH 99
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTR----Y 223
L Q++ L+ + Q V DR +++ IF A+T+E RLQ+ +A+L +L R Y
Sbjct: 100 E--LTPTQERNLEKILQCRVLDRVGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGY 157
Query: 224 RTIEDATNMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
++ KG L++ R ++ R LKK L+ LK QR + R ++ + T
Sbjct: 158 GHLQSQRGGIGMKGPGETKLETDRRLIAHRINALKKQLSSLKKQRALRRKSRESGRIKTF 217
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
A+VGYTN GK++L LT + ++QLFATLD T + I+ DT+GF+S++
Sbjct: 218 ALVGYTNVGKSSLFNRLTKS-GIYAKDQLFATLDTTARRLYISPECSIILTDTVGFVSDL 276
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
P L+ F TLE+ AD+++HVVD + P+ QQ + V+ LQ + + + V
Sbjct: 277 PHKLISAFSATLEETAQADVLLHVVDAAAPNSGQQIEDVENVLQEIHAGDI---PCIKVY 333
Query: 400 NKVDAVPPGERVTEEY--------DLLISATRGTGLAQLKEKVQDMILKA 441
NK D +P E+ T + + IS TG+ L+E + + A
Sbjct: 334 NKTDLLPSEEQNTGIWRDAAGKIAAVRISVAENTGIDALREAIAESCAAA 383
>gi|108761357|ref|YP_629613.1| GTP-binding protein HflX [Myxococcus xanthus DK 1622]
gi|108465237|gb|ABF90422.1| putative GTP-binding protein HflX [Myxococcus xanthus DK 1622]
Length = 550
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 179/346 (51%), Gaps = 23/346 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
LAE K L + G V+DS + D + G+G LE L +R + + +
Sbjct: 207 LAELKELART-AGVEVIDSVLQVKREADPRYLIGRGKLEEL--NLRSMQTMVDLLIFDKD 263
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
L Q + + + + + DR +++ IF A++ E +LQ+ +A+L Y R +D+
Sbjct: 264 LTPSQGRHIGEATSLKILDRSQLILDIFAQRAQSAEGKLQVELAQLKYRLPRLVQSDDSL 323
Query: 231 NMNI----------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
+ + TK +D +R+ ER L+K ++ + +R + R ++ R++ P ++
Sbjct: 324 SRLMGGIGGRGPGETKLEIDRRRV--RERITHLEKRIDAIGRERSVRRAQRNRRELPVIS 381
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+VGYTN GK+TL+ A+T+ + L N+LFATLD T+ P ++ DT+GFI ++P
Sbjct: 382 IVGYTNAGKSTLLNAITNAEVLA-ENKLFATLDPTSRRLRFPQEREVIITDTVGFIRDLP 440
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
L+ F+ TLE+ A +++HVVD ++P +Q + V+ L+ L+L EK L+V N
Sbjct: 441 KDLVAAFRATLEELYDASLLLHVVDAADPARDEQVEAVENILESLDLMEK---PRLMVWN 497
Query: 401 KVDAVPPGERVT---EEYDLLISATRGTGLAQLKEKVQDMILKATG 443
K D +PP E + ISA GLA L K D L A G
Sbjct: 498 KADLLPPDEVAALLRTRGGVAISAATREGLATLLAKA-DTTLFAEG 542
>gi|335427931|ref|ZP_08554851.1| GTP-binding protein [Haloplasma contractile SSD-17B]
gi|334893857|gb|EGM32066.1| GTP-binding protein [Haloplasma contractile SSD-17B]
Length = 417
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 161/279 (57%), Gaps = 23/279 (8%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ G G L +K+ V D T VF D L Q + +Q+ V DR +++ IF
Sbjct: 56 TYIGSGKLIEIKQYVLSDEIDTVVFN--DELTPTQLRNIQEEIPCKVIDRTTLILDIFAR 113
Query: 201 HAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDS-----KRMVLMEREQK--- 252
AKT+EA LQ+ IA+L YL R ++ D + + +G + S K++ L R +
Sbjct: 114 RAKTKEAILQVEIAQLRYLLPRLSSLHD--DFSRQEGRIGSRGPGEKKIELSRRRIESQI 171
Query: 253 --LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKAL-----TDDDSLV-P 304
L K L ++ +R++ R+ ++R K P VA+VGYTN GK+T++ +L +++ LV
Sbjct: 172 DFLNKKLKEIAEKRKIQRSLRKRNKIPVVALVGYTNAGKSTVLNSLIGYSKNEEEKLVFS 231
Query: 305 RNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
N LFATL+ TT + +L N R L DT+GF+S +P L++ F+ TLE+ + AD+I+HV+
Sbjct: 232 HNMLFATLETTTRKIILENNKRFLVTDTVGFVSKLPHHLIKAFRSTLEEVIEADLILHVI 291
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
D SN ++ +Q+Q ++ L L +++ V+ V NK+D
Sbjct: 292 DSSNSNHTKQEQVTNQVLTELGVKDT---PVVKVYNKID 327
>gi|359438528|ref|ZP_09228546.1| GTP-binding protein HflX [Pseudoalteromonas sp. BSi20311]
gi|359445819|ref|ZP_09235533.1| GTP-binding protein HflX [Pseudoalteromonas sp. BSi20439]
gi|358026804|dbj|GAA64795.1| GTP-binding protein HflX [Pseudoalteromonas sp. BSi20311]
gi|358040222|dbj|GAA71782.1| GTP-binding protein HflX [Pseudoalteromonas sp. BSi20439]
Length = 429
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 190/378 (50%), Gaps = 33/378 (8%)
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
K F G G E + V+ +F L Q++ L+ + Q V DR +++ IF
Sbjct: 55 KLFVGTGKAEEIAEIVKIHNADVVIFNHQ--LSPSQERNLERVCQCRVLDRTTLILDIFA 112
Query: 200 AHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLMER 249
A+T E +LQ+ +A+L ++ TR I T++ KG L++ R +L R
Sbjct: 113 QRARTHEGKLQVELAQLRHMSTRL--IRGWTHLERQKGGIGLRGPGETQLETDRRLLRAR 170
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
+ ++ L K+ QRE R + R + PTV++VGYTN GK+TL +TD D + +QLF
Sbjct: 171 IKNIRARLAKVAVQREQGRRARTRNEIPTVSLVGYTNAGKSTLFNYITDSD-VYAADQLF 229
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T + + + ++ DT+GFI ++P L+ FK TL + AD+ +HV+DV++P
Sbjct: 230 ATLDPTLRKLDIGDVGSVILADTVGFIRHLPHDLVAAFKATLTETREADLQLHVIDVADP 289
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD---------LLIS 420
+ + V E L+ +E +E L+V NK+DA+ + VT D + +S
Sbjct: 290 RRKENIEQVQEVLKEIEADEV---PQLLVYNKIDAL---DEVTPRIDRDDEGQPIRVWLS 343
Query: 421 ATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHL 480
A G G L E + D++ K + + + + G L +AV N R D+ +
Sbjct: 344 AKTGEGCELLSEAISDLLAKQMLNETLLLAPQYGRLRAS-LFNLSAVHNERFDEQG--NW 400
Query: 481 LLDVVMTDVIMNKFKHEF 498
LLDV + + N+ +F
Sbjct: 401 LLDVRLPMIEWNRLIKDF 418
>gi|281411746|ref|YP_003345825.1| GTP-binding proten HflX [Thermotoga naphthophila RKU-10]
gi|281372849|gb|ADA66411.1| GTP-binding proten HflX [Thermotoga naphthophila RKU-10]
Length = 406
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 119/358 (33%), Positives = 186/358 (51%), Gaps = 41/358 (11%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD- 169
L E K L ++ G VV+ D ++ GKG L+ LK V A V VD
Sbjct: 16 LEEMKGLCKTL-GVEVVEWLWQKRAKPDPATYLGKGKLQKLKEVVEF---CEADLVVVDD 71
Query: 170 VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIA----ELPYLWTR--- 222
+ Q K +Q V V DR ++++IF HA + E +LQ+ +A ELP L R
Sbjct: 72 EITPVQYKNMQSELNVDVLDRTQVILEIFARHATSEEGKLQVEMASLLYELPRLVGRGEE 131
Query: 223 -YRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
R + L+ R + R +L+K L +++ +R R ++ +K P V++
Sbjct: 132 LSRLGGGIGTRGPGEPLLEVLRRHIKNRIAQLRKRLKEIEQERNTQRKQRLEKKIPHVSI 191
Query: 282 VGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPT 341
VGYTN GK+TL+K LTD D V ++LFATL+ T L + +L DT+GFI +P
Sbjct: 192 VGYTNAGKSTLLKVLTDSDVYVA-DKLFATLEPVTRRLKLKSGRVVLVSDTVGFIRKLPH 250
Query: 342 TLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV------ 395
T++ FK TLE+ +D++IH+VD S+P YL++K ++ EK+LE +
Sbjct: 251 TIVSAFKATLEEIKYSDVLIHLVDASDP-YLEEK---------MKASEKVLEEIGADKIP 300
Query: 396 -LVVGNKVDAVPPGERVTE---EYD--LLISATRGTGLAQLKEKVQDMILKATGRKNI 447
++V NK+D P ER+ +Y L ISA + GL QL + +++++ G+K+I
Sbjct: 301 RILVFNKIDLC-PRERIETLKWKYPEALFISAEKRIGLDQLLDTLEEIM----GQKDI 353
>gi|449137555|ref|ZP_21772881.1| GTPase, HflX [Rhodopirellula europaea 6C]
gi|448884007|gb|EMB14514.1| GTPase, HflX [Rhodopirellula europaea 6C]
Length = 459
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 196/397 (49%), Gaps = 27/397 (6%)
Query: 118 VSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQV-RGDARVTAVFVSVDVLKLHQQ 176
+++ G VVD I + D ++ GKG +E L+ V R +A V V D L Q
Sbjct: 39 LATTSGTEVVDELIQRRSTPDHSTYLGKGKVEELRLMVERHEADV--VIFDND-LSPAQI 95
Query: 177 KMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWTRYRTIEDA 229
+ L+ V DR +++ IF A A+T E+RL + +A+L Y +WT
Sbjct: 96 RNLEKKTNAKVIDRTELILDIFAAGARTHESRLAVELAQLEYSLPRLKRMWTHLSRQSMG 155
Query: 230 TNM-NITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCG 288
M + L+ R + +R LK L ++ +RE R R PTV++VGYTN G
Sbjct: 156 VGMRGPGEKQLEVDRRLAQKRIHDLKTELKSVELRRE--RQVAARSDSPTVSLVGYTNAG 213
Query: 289 KTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFK 348
K+TL+ ALTD ++ +++LFATLD T LP +L DT+GFI ++P +L+ FK
Sbjct: 214 KSTLMNALTDA-GVMAQDKLFATLDTRTRRWHLPEWGHVLLSDTVGFIRDLPHSLVASFK 272
Query: 349 VTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG 408
TLE+ A++++HV D S+P +Q V + L+ L +E K L+V NK+DA+
Sbjct: 273 STLEETRQAELLLHVADASSPQVFEQISAVYQVLEELGIEAK---DTLLVLNKIDAITSP 329
Query: 409 ---ERVTEEYD--LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMK 463
RV + Y + +SA +GL L + V + A R+ + + + + + L
Sbjct: 330 RVLNRVLDRYPNAIPVSARSRSGLKPLAQAVGE----ALSREFLDVEIGVAHHDGKLLSF 385
Query: 464 HTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFIS 500
+A I + +H+++ V M M +S
Sbjct: 386 LSATGKIESREFGNDHVIVRVRMPASAMGTVNRSALS 422
>gi|319637675|ref|ZP_07992441.1| GTP-binding protein [Neisseria mucosa C102]
gi|317400830|gb|EFV81485.1| GTP-binding protein [Neisseria mucosa C102]
Length = 386
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 138/244 (56%), Gaps = 12/244 (4%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTR----YRTIEDAT 230
Q++ L+ Q V DR +++ IF A+++E +LQ+ +A+L +L R Y ++
Sbjct: 106 QERNLEKELQCRVLDRVGLILAIFAKRAQSQEGKLQVELAQLNHLSGRLVRGYGHLQSQK 165
Query: 231 NMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTN 286
KG L++ R ++ ++ LKK L ++ QR R + + T A+VGYTN
Sbjct: 166 GGIGLKGPGETQLETDRRLIGQKITALKKQLADVRKQRATRRKSRMSGRLKTFAIVGYTN 225
Query: 287 CGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEP 346
GK++L LT D L ++QLFATLD T L + ++ DT+GF+ ++P L+
Sbjct: 226 AGKSSLFNRLTKADVLA-KDQLFATLDTTARRLFLSHEASVILTDTVGFVRDLPHKLVSA 284
Query: 347 FKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP 406
F TLE+ +AD+++HVVD SNPD+ +Q V+E L+ + E I + LVV NK+D +P
Sbjct: 285 FSATLEETAMADVLLHVVDASNPDFERQMDDVNEVLEEIGAHE-IPQ--LVVYNKIDLLP 341
Query: 407 PGER 410
G R
Sbjct: 342 SGMR 345
>gi|392988800|ref|YP_006487393.1| GTP-binding protein [Enterococcus hirae ATCC 9790]
gi|392336220|gb|AFM70502.1| GTP-binding protein [Enterococcus hirae ATCC 9790]
Length = 403
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 164/312 (52%), Gaps = 15/312 (4%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D+++ GKG L+ L +Q DA + + + Q +++ + +P+ DR +++ I
Sbjct: 45 DRQTIIGKGKLQELIQQ--ADAHEADLIIFNHEMPPRQSQLVSEAVGIPIIDRVQLILDI 102
Query: 198 FKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMER 249
F A+++E +LQ+ +A+L YL R R + L++ R + +
Sbjct: 103 FAMRARSKEGKLQVELAQLEYLLPRLAGQGKSLSRLGGGIGTRGPGETKLETDRRHIRNK 162
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
+K+ L ++ R R K+Q + + ++GYTN GK+T++ LT D+ ++QLF
Sbjct: 163 ILGVKRELKAVEAHRARNRQKRQSSEIFQIGLIGYTNAGKSTILNLLTQADT-YSKDQLF 221
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T + I DT+GFI ++PT L++ F TLE++ D+++HVVD S+P
Sbjct: 222 ATLDPLTKKWRFAEGFEITVTDTVGFIQDLPTQLIDAFHSTLEESQSMDLLLHVVDASSP 281
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEY-DLLISATRGTGLA 428
D + Q+Q V + + L++EE VL V NK D + P + ++LISA G
Sbjct: 282 DRILQEQTVLQLMAELKMEEM---PVLTVYNKADQIEPALFTPSLFPNVLISAQSADGKE 338
Query: 429 QLKEKVQDMILK 440
+L + ++ +L+
Sbjct: 339 KLVQAIKQQLLE 350
>gi|399055651|ref|ZP_10743346.1| GTP-binding protein HflX [Brevibacillus sp. CF112]
gi|398046860|gb|EJL39444.1| GTP-binding protein HflX [Brevibacillus sp. CF112]
Length = 452
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 160/300 (53%), Gaps = 13/300 (4%)
Query: 164 VFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY 223
V + D L Q + L +F V DR +++ IF A++RE ++Q+ +A+ YL R
Sbjct: 102 VIIFNDELSPSQTRNLDKIFDCKVIDRTQLILDIFAGRAQSREGKIQVELAQYNYLLPRL 161
Query: 224 --------RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQK 275
R + L+S R + +R +LK+ L+ R++ R ++++
Sbjct: 162 AGQGKQLSRLGGGIGTRGPGESKLESDRRHIRKRISELKQQLDDTVRTRQLHRERRKKNN 221
Query: 276 FPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGF 335
+A+VGYTN GK+T++ LT ++L ++LFATLD TT + +LP+ L +L DT+GF
Sbjct: 222 VFQIALVGYTNAGKSTILNQLTQANTL-QEDKLFATLDPTTRQLVLPSGLEVLLTDTVGF 280
Query: 336 ISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHV 395
I ++PT+L+ F+ TLE AD+I+HVVD +PD + VD+ L+ L+ EE
Sbjct: 281 IQDLPTSLVAAFRSTLEGVKEADLILHVVDSHHPDLRVHMEVVDKILRELKAEEI---PQ 337
Query: 396 LVVGNKVDAVPPGERVTE-EYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG 454
LVV NK D + G + + +L+SA R +L +++ +L + + + V G
Sbjct: 338 LVVFNKADLLTEGAYLPHADESILVSAIREEDQQRLLARIEQFVLSSYNEMKLRVPVERG 397
>gi|421611230|ref|ZP_16052381.1| GTPase, HflX [Rhodopirellula baltica SH28]
gi|408498044|gb|EKK02552.1| GTPase, HflX [Rhodopirellula baltica SH28]
Length = 459
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 196/397 (49%), Gaps = 27/397 (6%)
Query: 118 VSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQV-RGDARVTAVFVSVDVLKLHQQ 176
+++ G VVD I + D ++ GKG +E L+ V R +A V V D L Q
Sbjct: 39 LATTSGTEVVDELIQRRSTPDHSTYLGKGKVEELRLMVERHEADV--VIFDND-LSPAQI 95
Query: 177 KMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWTRYRTIEDA 229
+ L+ V DR +++ IF A A+T E+RL + +A+L Y +WT
Sbjct: 96 RNLEKKTNAKVIDRTELILDIFAAGARTHESRLAVELAQLEYSLPRLKRMWTHLSRQSMG 155
Query: 230 TNM-NITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCG 288
M + L+ R + +R LK L ++ +RE R R PTV++VGYTN G
Sbjct: 156 VGMRGPGEKQLEVDRRLAQKRIHDLKTELKSVELRRE--RQVAARSDSPTVSLVGYTNAG 213
Query: 289 KTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFK 348
K+TL+ ALTD ++ +++LFATLD T LP +L DT+GFI ++P +L+ FK
Sbjct: 214 KSTLMNALTDA-GVMAQDKLFATLDTRTRRWHLPEWGHVLLSDTVGFIRDLPHSLVASFK 272
Query: 349 VTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG 408
TLE+ A++++HV D S+P +Q V + L+ L +E K L+V NK+DA+
Sbjct: 273 STLEETRQAELLLHVADASSPQVFEQISAVYQVLEELGIEAK---DTLLVLNKIDAITSP 329
Query: 409 ---ERVTEEYD--LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMK 463
RV + Y + +SA +GL L + V + A R+ + + + + + L
Sbjct: 330 RVLNRVLDRYPNAIPVSARSRSGLKPLAQAVGE----ALSREFLDVEIGVAHHDGKLLSF 385
Query: 464 HTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFIS 500
+A I + +H+++ V M M +S
Sbjct: 386 LSATGKIESREFGNDHVIVRVRMPASAMGTVNRSALS 422
>gi|417302414|ref|ZP_12089515.1| GTPase HflX [Rhodopirellula baltica WH47]
gi|327541274|gb|EGF27817.1| GTPase HflX [Rhodopirellula baltica WH47]
Length = 459
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 196/397 (49%), Gaps = 27/397 (6%)
Query: 118 VSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQV-RGDARVTAVFVSVDVLKLHQQ 176
+++ G VVD I + D ++ GKG +E L+ V R +A V V D L Q
Sbjct: 39 LATTSGTEVVDELIQRRSTPDHSTYLGKGKVEELRLMVERHEADV--VIFDND-LSPAQI 95
Query: 177 KMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWTRYRTIEDA 229
+ L+ V DR +++ IF A A+T E+RL + +A+L Y +WT
Sbjct: 96 RNLEKKTNAKVIDRTELILDIFAAGARTHESRLAVELAQLEYSLPRLKRMWTHLSRQSMG 155
Query: 230 TNM-NITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCG 288
M + L+ R + +R LK L ++ +RE R R PTV++VGYTN G
Sbjct: 156 VGMRGPGEKQLEVDRRLAQKRIHDLKTELKSVELRRE--RQVAARSDSPTVSLVGYTNAG 213
Query: 289 KTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFK 348
K+TL+ ALTD ++ +++LFATLD T LP +L DT+GFI ++P +L+ FK
Sbjct: 214 KSTLMNALTDA-GVMAQDKLFATLDTRTRRWHLPEWGHVLLSDTVGFIRDLPHSLVASFK 272
Query: 349 VTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG 408
TLE+ A++++HV D S+P +Q V + L+ L +E K L+V NK+DA+
Sbjct: 273 STLEETRQAELLLHVADASSPQVFEQISAVYQVLEELGIEAK---DTLLVLNKIDAITSP 329
Query: 409 ---ERVTEEYD--LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMK 463
RV + Y + +SA +GL L + V + A R+ + + + + + L
Sbjct: 330 RVLNRVLDRYPNAIPVSARSRSGLKPLAQAVGE----ALSREFLDVEIGVAHHDGKLLSF 385
Query: 464 HTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFIS 500
+A I + +H+++ V M M +S
Sbjct: 386 LSATGKIESREFGNDHVIVRVRMPASAMGTVNRSALS 422
>gi|77359239|ref|YP_338814.1| protease GTPase subunit [Pseudoalteromonas haloplanktis TAC125]
gi|76874150|emb|CAI85371.1| HflX, putative GTPase subunit of protease with nucleoside triP
hydrolase domain [Pseudoalteromonas haloplanktis TAC125]
Length = 429
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 129/431 (29%), Positives = 209/431 (48%), Gaps = 55/431 (12%)
Query: 95 IKWGKKMKRNTTRDFMLAESKALVSS---IQGWRVVDSTIISLLSFDKKSFFGKGNLELL 151
I + K+ R + L S A VSS +QG R K F G G E +
Sbjct: 16 IDFPKEGDREDLHELELLVSSAGVSSLAVVQGSRQAPH---------PKLFVGTGKAEEI 66
Query: 152 KRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQI 211
V+ +F L+ Q++ L+ + Q V DR +++ IF A+T E +LQ+
Sbjct: 67 AETVKIHNADVVIFNHQ--LRPSQERNLERILQCRVLDRTTLILDIFAQRARTHEGKLQV 124
Query: 212 AIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLMEREQKLKKALNKLK 261
+A+L ++ TR I T++ KG L++ R +L R Q ++ L+K+
Sbjct: 125 ELAQLRHMSTRL--IRGWTHLERQKGGVGLRGPGETQLETDRRLLRARLQNIRARLDKVA 182
Query: 262 GQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGML 321
QRE R + R + PTV++VGYTN GK+TL +T+ D + +QLFATLD T + L
Sbjct: 183 VQREQGRRARSRNEIPTVSLVGYTNAGKSTLFNRITNSD-VYAADQLFATLDPTLRKLEL 241
Query: 322 PNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDET 381
+ ++ DT+GFI ++P L+ FK TL + AD+ +HV+DV++ + + V
Sbjct: 242 GDVGPVILADTVGFIRHLPHDLVAAFKATLTETREADLQLHVIDVADARLKENIEQVQSV 301
Query: 382 LQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD---------LLISATRGTGLAQLKE 432
L+ +E +E L+V NK+DA+ + +T D + +SA G G L E
Sbjct: 302 LKEIEADEV---PQLLVYNKIDAL---DDITARIDRDDEGQPIRVWLSAQTGEGCELLSE 355
Query: 433 KVQDMILKATGRKNITM-----RVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMT 487
+ +++ K + + + R+RS L +AVS+ R D+ + LLDV +
Sbjct: 356 AISELLAKQMLSETLLLAPQYGRLRSS------LFSLSAVSDERFDEQG--NWLLDVRLP 407
Query: 488 DVIMNKFKHEF 498
V N+ EF
Sbjct: 408 VVEWNRLIKEF 418
>gi|150396315|ref|YP_001326782.1| HSR1-like GTP-binding protein [Sinorhizobium medicae WSM419]
gi|150027830|gb|ABR59947.1| GTP-binding protein HSR1-related [Sinorhizobium medicae WSM419]
Length = 465
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 206/418 (49%), Gaps = 40/418 (9%)
Query: 85 DHQVFVVQPFIKWGKKMK-----RNTTRD--FMLAESKALVSSIQGWRVVDSTIISLLSF 137
D + VV P +K ++ ++ TR L E+ L +I VV ++ +
Sbjct: 24 DSRAVVVVPVLKKAGRVSADIVAQSATRSDQSRLEEATGLALAID-LEVVHGMVVPVAQP 82
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
+ G G +E + V D V V + + QQ+ L+ + V DR ++++I
Sbjct: 83 KPGTLLGTGKIEEIG-HVLSDKDAGLVIVDHPLTPV-QQRNLEKEWNAKVIDRTGLILEI 140
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVL 246
F A TRE LQ+ +A L Y + R + T++ +G +++ R +L
Sbjct: 141 FGRRASTREGTLQVDLAHLNY--QKGRLVRSWTHLERQRGGAGFMGGPGETQIEADRRLL 198
Query: 247 MEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRN 306
ER KL++ L +++ R++ R+K+++ P VA+VGYTN GK+TL +T L +
Sbjct: 199 QERIVKLERELEQVRRTRQLHRSKRKKVPHPIVALVGYTNAGKSTLFNRMTGAGVLA-ED 257
Query: 307 QLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDV 366
LFATLD T LP+ ++ DT+GFIS++PT L+ F+ TLE+ + AD+I+HV D+
Sbjct: 258 MLFATLDPTLRRLKLPHGRMVILSDTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDL 317
Query: 367 SNPDYLQQKQHVDETLQHLELEEK-ILEHVLVVGNKVDAVPPGER-------VTEEYDLL 418
S+PD Q V L L ++EK E ++ V NK+D V P R + + +
Sbjct: 318 SDPDNQAQASDVLRILSDLGIDEKEGAERIVEVWNKIDKVEPEVREVLVKKAASVDNTVA 377
Query: 419 ISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQ---WLMKHTAVSNIRED 473
+SA G G+ +L ++ + I + G + Q W+ +H A+ + RED
Sbjct: 378 VSAMTGEGVGELLTEIGRRLSGVMTECTIVL----GLDQLQFLPWVYQH-AIVDARED 430
>gi|424904617|ref|ZP_18328127.1| GTP-binding protein HflX [Burkholderia thailandensis MSMB43]
gi|390930595|gb|EIP87997.1| GTP-binding protein HflX [Burkholderia thailandensis MSMB43]
Length = 381
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 168/316 (53%), Gaps = 28/316 (8%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D F G G E L+ + +A + + L QQ+ L+ + V DR +++
Sbjct: 38 SPDAAMFVGSGKAEELR--LACEANDVEIVIFNHALAPAQQRNLERMLNRRVVDRTSLIL 95
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMV 245
IF A++ E +LQ+ +A+L YL TR I T++ KG L++ R +
Sbjct: 96 DIFAQRARSHEGKLQVELAQLQYLATRL--IRAWTHLERQKGGIGLRGPGETQLETDRRL 153
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR 305
+ ER + LK L++L+ Q R ++ R +V++VGYTN GK+TL ALT +
Sbjct: 154 IGERIKMLKSRLDRLRRQHHTQRRQRARSGAMSVSLVGYTNAGKSTLFNALTKAQAYAA- 212
Query: 306 NQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
+QLFATLD T+ L + + +I+ DT+GFI +P L+ F+ TLE+ + AD+++HVV
Sbjct: 213 DQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVV 272
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP-----GERVTEEYD--- 416
D S+ L+Q + V++ L+ E+ + VLV NK+DAVP G +EY
Sbjct: 273 DASSAVRLEQIEQVNDVLR--EIGADSIRQVLVF-NKIDAVPELAARGGAVERDEYGNIS 329
Query: 417 -LLISATRGTGLAQLK 431
+ +SA G GL L+
Sbjct: 330 RVFLSARTGQGLDSLR 345
>gi|373953852|ref|ZP_09613812.1| GTP-binding proten HflX [Mucilaginibacter paludis DSM 18603]
gi|373890452|gb|EHQ26349.1| GTP-binding proten HflX [Mucilaginibacter paludis DSM 18603]
Length = 394
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 162/293 (55%), Gaps = 17/293 (5%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G + V + +L ++ +F G G LE +K V DA + V D L Q + +++
Sbjct: 45 GGKTVKTFTQKMLRPERSTFVGTGKLEEIKAYV--DAEEIDIVVFDDGLSPSQLRNIENE 102
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYL-------WTRYRTIEDATNM-NI 234
QV + DR +++ IF A A+T +AR Q+ +A+L YL WT + M
Sbjct: 103 LQVKILDRNNLILDIFAARAQTSQARTQVELAQLQYLLPRLTRLWTHLERQKGGIGMRGP 162
Query: 235 TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIK 294
+ +++ R +++ + LK+ L + Q E R K R + VA+VGYTN GK+T++
Sbjct: 163 GESQIETDRRIILNKISLLKERLKLIDRQNETQR--KNRGQLIRVALVGYTNVGKSTIMN 220
Query: 295 ALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDA 354
++ + + N+LFATLD T + ++ N L L DT+GFI +P L+E FK TL++
Sbjct: 221 MISKSE-VFAENKLFATLDTTVRKVVIDN-LPFLLSDTVGFIRKLPHHLVECFKSTLDEV 278
Query: 355 MLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP 407
ADI++HVVDVS+P++ Q + V+ETL+ L +K V+ V NK+DA P
Sbjct: 279 READILLHVVDVSHPNFEDQIKTVNETLKELGAIDK---PVITVFNKIDAYKP 328
>gi|402817023|ref|ZP_10866612.1| GTPase HflX [Paenibacillus alvei DSM 29]
gi|402505129|gb|EJW15655.1| GTPase HflX [Paenibacillus alvei DSM 29]
Length = 428
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 168/325 (51%), Gaps = 21/325 (6%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D + F GKG ++ L+ + TA+F L Q + L++ V + DR +++ I
Sbjct: 63 DPRWFIGKGKVQELRGVIDELGATTAIFDQE--LSGAQVRNLEEALDVKIVDRTQLILDI 120
Query: 198 FKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMER 249
F AKTRE +Q+ +A+L YL R R + L++ R + R
Sbjct: 121 FAQRAKTREGIIQVELAQLSYLLPRLSGHGKNLSRQGGGIGTRGPGESQLETDRRHIRGR 180
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
LK+ L+++ R + R ++++ VA+VGYTN GK+TL++ LT D V NQLF
Sbjct: 181 ISDLKRQLHEVVRSRNLHRERRKKTGAYQVALVGYTNAGKSTLLRQLTQADVYV-ENQLF 239
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T+ + LP+ ++ DT+GFI N+P L+ F+ TLE+ AD+I+HV+D S+P
Sbjct: 240 ATLDPTSRQWELPSGKEVVLTDTVGFIQNLPHDLVAAFRATLEEVNEADLILHVMDASSP 299
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD---LLISATRGTG 426
+ V++ LQ L K +V+ NK D P +R +D +ISA
Sbjct: 300 MREDHMRVVEDILQQLGAGAK---PQIVLYNKKDLCTPEQRQMLPHDKSHFIISAYDEGD 356
Query: 427 LAQLKEKVQDMILKATGRKNITMRV 451
L ++++ VQD + T IT R+
Sbjct: 357 LERIRQVVQDQLAGQT----ITYRI 377
>gi|237785685|ref|YP_002906390.1| putative GTP-binding protein [Corynebacterium kroppenstedtii DSM
44385]
gi|237758597|gb|ACR17847.1| putative GTP-binding protein [Corynebacterium kroppenstedtii DSM
44385]
Length = 507
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 182/355 (51%), Gaps = 28/355 (7%)
Query: 104 NTTRDF--MLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARV 161
TT +F L E +AL + G V++S D ++ G G + L+ VR
Sbjct: 93 GTTAEFEANLEELRALAET-AGSEVLESFYQRREKPDAGTYIGSGKVAELRDAVRSLGAD 151
Query: 162 TAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWT 221
T + L Q L+ V V DR M+++ IF HAK++E + Q+++A++ YL+T
Sbjct: 152 TVICDGE--LSPGQLIALEKQLDVKVIDRTMLILDIFAQHAKSKEGKAQVSLAQMEYLYT 209
Query: 222 RYRTIED----------ATNMNIT-KGFLDSK----RMVLMEREQKLKKALNKLKGQREM 266
R R D +N + +G ++K R L + +L+ L + RE+
Sbjct: 210 RVRGWGDMMSRQAGGRAGSNGGVGLRGPGETKIEADRRRLRKDMARLRAELRSMTTAREI 269
Query: 267 MRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLR 326
R+++ P +A+ GYTN GK++LI A+T LV + LFATLD TT L +
Sbjct: 270 KRDRRDSSTTPQIAIAGYTNAGKSSLINAITGAGVLV-EDALFATLDPTTRRAELADGRA 328
Query: 327 ILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL- 385
+++ DT+GF+ ++PT L+E F+ +LE+ AD+++HVVD S+P L+Q V E L +
Sbjct: 329 VIFSDTVGFVRHLPTQLVEAFRSSLEEVASADLVLHVVDGSDPFPLKQIAAVHEVLADVR 388
Query: 386 -ELEEKILEHVLVVGNKVDAVPP--GERVTEEYD--LLISATRGTGLAQLKEKVQ 435
E + ++VV NK+D P ++ E D + +SA G + +L +++
Sbjct: 389 NSRAETMPPEIIVV-NKIDQADPIVLAQLRHELDDVVFVSAKTGENIDELASRIE 442
>gi|284041081|ref|YP_003391011.1| GTP-binding proten HflX [Spirosoma linguale DSM 74]
gi|283820374|gb|ADB42212.1| GTP-binding proten HflX [Spirosoma linguale DSM 74]
Length = 426
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 181/328 (55%), Gaps = 20/328 (6%)
Query: 99 KKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGD 158
+K T+D++ + A ++ G + + + L D ++F GKG LE ++ + +
Sbjct: 19 QKQTAEQTKDYL--DELAFLAETSGVKTIQTFTQKLEHPDNRTFVGKGKLEEIQTFILDN 76
Query: 159 ARVTAVFVSVDVLKLHQQKMLQDLFQ-VPVFDRYMIVIQIFKAHAKTREARLQIAIAELP 217
+F D L Q + L+D F+ + V DR ++++ IF A+T ++R+Q+ +A+
Sbjct: 77 PVDCVIFD--DDLSPSQVRNLEDSFKDIKVLDRSLLILNIFSMRAQTAQSRVQVELAQYQ 134
Query: 218 YLWTRY-RTIEDATNMNITKGF-------LDSKRMVLMEREQKLKKALNKLKGQREMMRN 269
Y++ R R T+ G L++ R ++ +R LK+ L K+ Q +
Sbjct: 135 YMYPRLTRMWSHLTSQKGGVGMRGPGEKELETDRRIVKDRIAFLKEKLAKIDKQS--VTR 192
Query: 270 KKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILY 329
+K+R + VA+VGYTN GK+TL++ + D + N+LFAT+D T + L N + L
Sbjct: 193 RKERDRLVRVALVGYTNVGKSTLMRTMAKAD-VFAENKLFATVDSTVRKVTLGN-IPFLL 250
Query: 330 VDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEE 389
DT+GFI +PT L+E FK TL++ ADI++HVVDVS+P++ +Q + V+ TL ++ +
Sbjct: 251 TDTVGFIRKLPTMLIESFKSTLDEVREADILVHVVDVSHPNFEEQIEVVNSTLADIKAAD 310
Query: 390 KILEHVLVVGNKVDAVPPGERVTEEYDL 417
K + ++V NK+D P TE+ +L
Sbjct: 311 KPM---VLVFNKMDRFSPKASWTEKAEL 335
>gi|50955206|ref|YP_062494.1| GTP-binding protein [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50951688|gb|AAT89389.1| GTP-binding protein [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 489
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 159/316 (50%), Gaps = 32/316 (10%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQ 196
D ++FG+G E L V + + A V D L Q++ L+D+ +V V DR +++
Sbjct: 118 DPGTYFGRGKAEELAGVV---SALGADTVIADTELAPSQRRALEDVVKVKVIDRTAVILD 174
Query: 197 IFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI------------------TKGF 238
IF HAK+ E + Q+ +A+L YL R R ++ + TK
Sbjct: 175 IFSQHAKSCEGKAQVELAQLEYLLPRLRGWGESMSRQAGGQVGGAGAAMGSRGPGETKIE 234
Query: 239 LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTD 298
LD +R + R KL+K + K RE R + R P+VA+ GYTN GK++L+ +T
Sbjct: 235 LDRRR--IHTRMAKLRKQIAGFKPAREAKRANRNRNAVPSVAIAGYTNAGKSSLLNRVTK 292
Query: 299 DDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLAD 358
LV N LFATLD T + + DT+GF+ N+P L+E F+ TLE+ +D
Sbjct: 293 AGVLV-ENALFATLDATVRRSVTADGRLYTLADTVGFVRNLPHQLVEAFRSTLEEVADSD 351
Query: 359 IIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVT----EE 414
+I+HVVD S+PD Q V + + + + I E +VV NK D +P ER+ E
Sbjct: 352 VIVHVVDGSHPDPASQLATVRDVIGDVGARD-IPE--IVVFNKADLIPEDERLVLRGLEP 408
Query: 415 YDLLISATRGTGLAQL 430
+ SA G G+ ++
Sbjct: 409 GAIFASARTGEGVEEV 424
>gi|440713397|ref|ZP_20893998.1| GTPase, HflX [Rhodopirellula baltica SWK14]
gi|436441863|gb|ELP35055.1| GTPase, HflX [Rhodopirellula baltica SWK14]
Length = 459
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 118 VSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQV-RGDARVTAVFVSVDVLKLHQQ 176
+++ G VVD I + D ++ GKG +E L+ V R +A V V D L Q
Sbjct: 39 LATTSGTEVVDELIQRRSTPDHSTYLGKGKVEELRLMVERHEADV--VIFDND-LSPAQI 95
Query: 177 KMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPY-------LWTRYRTIEDA 229
+ L+ V DR +++ IF A A+T E+RL + +A+L Y +WT
Sbjct: 96 RNLEKKTNAKVIDRTELILDIFAAGARTHESRLAVELAQLEYSLPRLKRMWTHLSRQSMG 155
Query: 230 TNM-NITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCG 288
M + L+ R + +R LK L ++ +RE R R PTV++VGYTN G
Sbjct: 156 VGMRGPGEKQLEVDRRLAQKRIHDLKTELKSVELRRE--RQVAARSDSPTVSLVGYTNAG 213
Query: 289 KTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFK 348
K+TL+ ALTD ++ +++LFATLD T LP +L DT+GFI ++P +L+ FK
Sbjct: 214 KSTLMNALTDA-GVMAQDKLFATLDTRTRRWHLPEWGHVLLSDTVGFIRDLPHSLVASFK 272
Query: 349 VTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPG 408
TLE+ A++++HV D S+P +Q V + L+ L +E K L+V NK+DA+
Sbjct: 273 STLEETRQAELLLHVADASSPQVFEQISAVYQVLEELGIEAK---DTLLVLNKIDAITSP 329
Query: 409 ---ERVTEEYD--LLISATRGTGLAQLKEKVQDMI 438
RV + Y + +SA +GL L + V + +
Sbjct: 330 RVLNRVLDRYPNAIPVSARSRSGLKPLAQAVGEAL 364
>gi|400976505|ref|ZP_10803736.1| GTP-binding protein [Salinibacterium sp. PAMC 21357]
Length = 515
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 166/339 (48%), Gaps = 32/339 (9%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQD 181
G V+D + S D ++FGKG L+ V A A V D L Q++ L+D
Sbjct: 127 GAVVLDGLLQSRSHPDPSTYFGKGKAIELRDVV---AATGADTVIADTELAPSQRRALED 183
Query: 182 LFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI------- 234
+ V V DR +++ IF HA +RE + Q+ +A++ YL R R ++ +
Sbjct: 184 VVGVKVIDRTAVILDIFSQHATSREGKAQVELAQMEYLLPRLRGWGESMSRQAGGQVGGA 243
Query: 235 -----------TKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVG 283
TK LD +R + R +L+K + RE R + R + P+VA+ G
Sbjct: 244 GAGMGSRGPGETKIELDRRR--IHTRMARLRKQIKGFAPAREAKRANRDRFEVPSVAIAG 301
Query: 284 YTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTL 343
YTN GK++L+ LT LV N LFATLD T + DT+GF+ N+P L
Sbjct: 302 YTNAGKSSLLNRLTRAGVLV-ENALFATLDATVRRSATADGRLFTLSDTVGFVRNLPHQL 360
Query: 344 LEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+E F+ TLE+ +D+I+HVVD S+PD Q V + + L + I E +VV NK D
Sbjct: 361 VEAFRSTLEEIGQSDVIVHVVDASHPDPGAQLATVRDVIGELGARD-IPE--IVVFNKSD 417
Query: 404 AVPPGERV----TEEYDLLISATRGTGLAQLKEKVQDMI 438
+RV E + +SA G G+ +L ++ +++
Sbjct: 418 LADDDQRVLIRGLEPTGIFVSARSGEGIDELNARIAELL 456
>gi|294139257|ref|YP_003555235.1| GTP-binding protein HflX [Shewanella violacea DSS12]
gi|293325726|dbj|BAJ00457.1| GTP-binding protein HflX [Shewanella violacea DSS12]
Length = 432
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 185/367 (50%), Gaps = 34/367 (9%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E K LV S G + V S S D+K F G G + L V +F
Sbjct: 27 LVELKLLVESA-GAQQVGVITTSRRSPDRKFFLGSGKADELAALVAATEANVVIFNHA-- 83
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
L Q++ L+ + Q V DR +++ IF A+T E +LQ+ +A+L ++ TR I T
Sbjct: 84 LSPAQERNLEMVCQCRVLDRTALILDIFAQRARTYEGKLQVELAQLRHMSTRL--IRGWT 141
Query: 231 NMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
++ KG L++ R +L R + K L K+ QRE R + R + PTV+
Sbjct: 142 HLERQKGGIGMRGPGETQLETDRRLLRGRMGTINKRLAKVDKQREQSRRARSRSEQPTVS 201
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+VGYTN GK+TL +LT D + +QLFATLD T + LP+ I+ DT+GFI ++P
Sbjct: 202 LVGYTNAGKSTLFNSLTVSD-VYAADQLFATLDPTLRKLDLPDGA-IILADTVGFIRHLP 259
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
L+ FK TL++ AD+++H+VD + + + V L+ + +E LVV N
Sbjct: 260 HDLVAAFKSTLQETREADLLLHIVDCHDDNMEDNFEQVQLVLKEIGADEI---PQLVVCN 316
Query: 401 KVDAVPPGERVTEEYD---------LLISATRGTGLAQLKEKVQDMILKATGRKNITMRV 451
K+D + E V+ D + +SA + GL QLKE + ++ +AT +T+R+
Sbjct: 317 KIDLL---EDVSPRIDYNDEGVPTRVWVSAQQQKGLDQLKEAINQIVGRAT--LELTLRI 371
Query: 452 RSGGSEY 458
+ Y
Sbjct: 372 PATAGHY 378
>gi|333995979|ref|YP_004528592.1| GTP-binding protein HflX [Treponema azotonutricium ZAS-9]
gi|333734196|gb|AEF80145.1| GTP-binding protein HflX [Treponema azotonutricium ZAS-9]
Length = 423
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 164/286 (57%), Gaps = 28/286 (9%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI 234
QQ+ ++L + V DR ++IQIF A+TREA LQ+++AEL Y R + ++N
Sbjct: 94 QQRNWEELTGISVIDRQELIIQIFSGRARTREADLQVSLAELYYSLPRLQ--HKYIDLNR 151
Query: 235 TKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVG 283
+G L++ R ++ +R +L++ L ++ QR+ R ++Q+Q A+VG
Sbjct: 152 QRGGRYGTKGSGETRLETDRRLVEQRIHRLEEELETVRRQRDTQRKQRQKQGMQVCAIVG 211
Query: 284 YTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTL 343
YTN GK+TL+ ALT + L ++LFATLD T+ +LP L IL VDT+GFI +P L
Sbjct: 212 YTNAGKSTLLNALTGAEVLA-EDKLFATLDSTSRRLLLPGGLPILLVDTVGFIRRLPHNL 270
Query: 344 LEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL-EL-EEKILEHVLVVGNK 401
+ F+ TLE+A L+D++IHV+D S+PD + D TLQ L EL +K+ +L V NK
Sbjct: 271 VNAFRSTLEEASLSDLLIHVLDASDPD---APAYYDTTLQVLRELGADKV--PMLTVLNK 325
Query: 402 VDAVPPGERVTE------EYDLLISATRGTGLAQLKEKVQDMILKA 441
D P E E + +SA+ G GL+ L +++ ++ A
Sbjct: 326 ADR-PEASAYIEDLKTRYEGAIPLSASTGEGLSDLLARMESLLAGA 370
>gi|384196733|ref|YP_005582477.1| GTP-binding protein HflX [Bifidobacterium breve ACS-071-V-Sch8b]
gi|333109575|gb|AEF26591.1| GTP-binding protein HflX [Bifidobacterium breve ACS-071-V-Sch8b]
Length = 501
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 176/363 (48%), Gaps = 28/363 (7%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR 156
W + + L E AL + G V D + D ++ G G + V
Sbjct: 88 WSSAVTTQAKAEESLRELAALAET-AGAVVCDGLLQHRSKPDAATYVGSGKAREIADIV- 145
Query: 157 GDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
AR A + VD L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+
Sbjct: 146 --AREEADTIVVDDDLAPSQRRALEDAAKVKVVDRTAVILDIFAQHATSREGKAQVELAQ 203
Query: 216 LPYLWTRYR------------TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNK 259
L Y+ R R A ++G ++K R V+ R +L++ + +
Sbjct: 204 LEYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRARIARLRRQIRE 263
Query: 260 LKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEG 319
+ RE+ R ++R PTVAVVGYTN GK++L LT LV N LFATLD
Sbjct: 264 MAPAREIKRGSRRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRA 322
Query: 320 MLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVD 379
+ YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q V+
Sbjct: 323 KTHDGRAFAYVDTVGFVRRLPTQLVEAFKSTLEEVGEADVIVHVVDGSHPDPFSQIDAVN 382
Query: 380 ETLQHLELEEKILEHVLVVGNKVDAVPPGER----VTEEYDLLISATRGTGLAQLKEKVQ 435
+ L +E I ++V NK D + +R + ++SA G GL L++ V+
Sbjct: 383 DVLADIEGTASIPR--ILVFNKADQIDDAKRERLAALQPDAFIVSAYSGKGLDALRDAVE 440
Query: 436 DMI 438
+++
Sbjct: 441 ELL 443
>gi|261209769|ref|ZP_05924075.1| GTP-binding protein HflX [Vibrio sp. RC341]
gi|260841185|gb|EEX67695.1| GTP-binding protein HflX [Vibrio sp. RC341]
Length = 429
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 183/361 (50%), Gaps = 25/361 (6%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L+E K L+SS G + S + K F G+G + + V+ +F
Sbjct: 27 LSECKMLISSA-GVTTLHVVTGSRQTPHPKYFVGEGKAQEIAEAVQMHGANVVIFNHA-- 83
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
L Q++ L+ L Q V DR +++ IF A+T E +LQ+ +A+L ++ TR I T
Sbjct: 84 LSPAQERNLERLCQCRVIDRTGLILDIFAQRARTHEGKLQVELAQLRHISTRL--IRGWT 141
Query: 231 NMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
++ KG L++ R +L ER + + + L K+ QRE R + R + PT++
Sbjct: 142 HLERQKGGIGLRGPGETQLETDRRLLRERIKAILRRLEKVAKQREQGRRARSRAEIPTIS 201
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+VGYTN GK+TL +T+ + +QLFATLD T + L + + DT+GFI ++P
Sbjct: 202 LVGYTNAGKSTLFNRITEA-GVYAADQLFATLDPTLRKIDLADVGPAVLADTVGFIRHLP 260
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
L+ FK TL++ ADI++HVVD S+ + + Q V+ LQ ++ E L+V N
Sbjct: 261 HDLVAAFKATLQETQEADILLHVVDASDERFRENIQAVETVLQEIDAHEV---PTLLVMN 317
Query: 401 KVDAV----PPGERVTEEYD--LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSG 454
K+D + P ER E + ISA +GTG+ L E + + + N+ + R
Sbjct: 318 KIDNLEEHAPRIERDDEGVPRVVWISAMQGTGIELLFEALSERLASQVVEHNLRIPPRHQ 377
Query: 455 G 455
G
Sbjct: 378 G 378
>gi|335430176|ref|ZP_08557071.1| GTP-binding protein [Haloplasma contractile SSD-17B]
gi|334888592|gb|EGM26889.1| GTP-binding protein [Haloplasma contractile SSD-17B]
Length = 421
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 179/362 (49%), Gaps = 21/362 (5%)
Query: 108 DFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVS 167
D+ + E K L + + VV++ +L + K + GKG LE L V +V V +
Sbjct: 23 DYQMEELKNLAVA-NDYHVVETMTQNLYKINNKYYMGKGKLEELANLV-SHIQVPIVIFN 80
Query: 168 VDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIE 227
D L Q +++ + + DR +++ IF + AKT+EA++Q IA L Y R
Sbjct: 81 -DELSPSQVRIISEYLSCKIMDRTKLILDIFNSRAKTKEAKIQTEIALLEYRLPRLVGEG 139
Query: 228 DATNMNITKGF---------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
DA + G L++ R + +R + L L+ +K +RE R ++Q+ P
Sbjct: 140 DALDRQRGGGVHNKGAGETKLETDRRKISQRIKSLNIELSDIKTKRETTRKRRQKSDLPI 199
Query: 279 VAVVGYTNCGKTTLIKAL------TDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDT 332
++++GYTN GK+T++ AL D+ + +N LFATL+ + L + L DT
Sbjct: 200 ISLIGYTNAGKSTIMNALLELYHHNDNKEVFEKNMLFATLNTSIRNIKLHDNKEFLLTDT 259
Query: 333 IGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKIL 392
+GFI +P ++ F+ TLE+ + +D+I+HVVD S+P++ K+H++ T L
Sbjct: 260 VGFIKKLPHQVVNAFRSTLEEVLHSDLILHVVDCSDPNH---KEHMETTQNVLNELGYTD 316
Query: 393 EHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVR 452
+++V NKVD + + ISA G L E +++ LK R + + +
Sbjct: 317 VPIIMVYNKVDLLEANNSSNSSNGVYISAKYKRGFDHLVELIEEHALKTYIRCEMLIPFQ 376
Query: 453 SG 454
G
Sbjct: 377 DG 378
>gi|354566848|ref|ZP_08986019.1| GTP-binding proten HflX [Fischerella sp. JSC-11]
gi|353544507|gb|EHC13961.1| GTP-binding proten HflX [Fischerella sp. JSC-11]
Length = 604
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 162/292 (55%), Gaps = 21/292 (7%)
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY------- 223
L Q + L+ V V DR +++ IF A++R +LQ+ +A+L Y+ R
Sbjct: 317 LSPSQVRNLETQIGVRVVDRTEVILDIFAQRAQSRAGKLQVELAQLEYMLPRLSGRGQAM 376
Query: 224 -RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
R + L+++R + R +L++ +N+L+ RE +R ++Q ++ P+VA+V
Sbjct: 377 SRLGGGIGTRGPGETKLETERRAISRRISRLQQEVNQLQAHRERLRQRRQNREIPSVALV 436
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRL-----RILYVDTIGFIS 337
GYTN GK+TL+ ALT+ + + +QLFATLD TT ++P+ IL DT+GFI
Sbjct: 437 GYTNAGKSTLLNALTNAE-VYTADQLFATLDPTTRRLVVPHAATNEPQEILITDTVGFIH 495
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
+P +L++ F+ TLE+ AD +IH+VD+S+P +L + V E L + + LV
Sbjct: 496 ELPASLMDAFRATLEEVTEADALIHLVDLSHPAWLSHIRSVREILAQMPVTPG---PALV 552
Query: 398 VGNKVDAVPPG--ERVTEEYDL--LISATRGTGLAQLKEKVQDMILKATGRK 445
V NK+D V + EE+ L ISA++ GL L++++ ++ AT +
Sbjct: 553 VFNKIDQVSSETLAQAREEFPLAVFISASKRLGLETLRQRLGQLVQYATSSR 604
>gi|116053092|ref|YP_793411.1| GTP-binding protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|218894038|ref|YP_002442907.1| putative GTP-binding protein [Pseudomonas aeruginosa LESB58]
gi|254244166|ref|ZP_04937488.1| hypothetical protein PA2G_05009 [Pseudomonas aeruginosa 2192]
gi|296391783|ref|ZP_06881258.1| GTP-binding protein HflX [Pseudomonas aeruginosa PAb1]
gi|313109944|ref|ZP_07795872.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016]
gi|386061114|ref|YP_005977636.1| putative GTP-binding protein [Pseudomonas aeruginosa M18]
gi|386063548|ref|YP_005978852.1| putative GTP-binding protein [Pseudomonas aeruginosa NCGM2.S1]
gi|416865087|ref|ZP_11915663.1| GTP-binding protein HflX [Pseudomonas aeruginosa 138244]
gi|416874089|ref|ZP_11917920.1| GTP-binding protein HflX [Pseudomonas aeruginosa 152504]
gi|421170761|ref|ZP_15628686.1| GTP-binding protein [Pseudomonas aeruginosa ATCC 700888]
gi|421177198|ref|ZP_15634854.1| GTP-binding protein [Pseudomonas aeruginosa CI27]
gi|424944265|ref|ZP_18360028.1| probable GTP-binding protein [Pseudomonas aeruginosa NCMG1179]
gi|451985424|ref|ZP_21933644.1| GTP-binding protein HflX [Pseudomonas aeruginosa 18A]
gi|115588313|gb|ABJ14328.1| putative GTP-binding protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126197544|gb|EAZ61607.1| hypothetical protein PA2G_05009 [Pseudomonas aeruginosa 2192]
gi|218774266|emb|CAW30083.1| probable GTP-binding protein [Pseudomonas aeruginosa LESB58]
gi|310882374|gb|EFQ40968.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016]
gi|334834621|gb|EGM13564.1| GTP-binding protein HflX [Pseudomonas aeruginosa 138244]
gi|334843937|gb|EGM22519.1| GTP-binding protein HflX [Pseudomonas aeruginosa 152504]
gi|346060711|dbj|GAA20594.1| probable GTP-binding protein [Pseudomonas aeruginosa NCMG1179]
gi|347307420|gb|AEO77534.1| putative GTP-binding protein [Pseudomonas aeruginosa M18]
gi|348032107|dbj|BAK87467.1| putative GTP-binding protein [Pseudomonas aeruginosa NCGM2.S1]
gi|404522420|gb|EKA32923.1| GTP-binding protein [Pseudomonas aeruginosa ATCC 700888]
gi|404529842|gb|EKA39862.1| GTP-binding protein [Pseudomonas aeruginosa CI27]
gi|451756945|emb|CCQ86167.1| GTP-binding protein HflX [Pseudomonas aeruginosa 18A]
gi|453046453|gb|EME94169.1| GTP-binding protein HflX [Pseudomonas aeruginosa PA21_ST175]
Length = 433
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 175/342 (51%), Gaps = 25/342 (7%)
Query: 113 ESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLK 172
E + LV S G V +S K G G +E L V+ + +F L
Sbjct: 30 EFQELVRSA-GAETVAFVSVSRHQPSAKYLIGSGKVEELHDLVKAENVELVIFNHT--LT 86
Query: 173 LHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNM 232
Q++ L+ F+ V DR +++ IF A+T E +LQ+ +A+L ++ TR + T++
Sbjct: 87 PSQERNLERAFECRVLDRTGLILDIFAQRARTHEGKLQVELAQLEHMSTRL--VRGWTHL 144
Query: 233 NITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
KG L++ R +L R +++K+ L K++ QRE R ++R P V++V
Sbjct: 145 ERQKGGIGLRGPGETQLETDRRLLRVRIRQIKQRLEKVRSQREQARRGRKRADIPAVSLV 204
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL ALT + + NQLFATLD T L + ++ DT+GFI ++P
Sbjct: 205 GYTNAGKSTLFNALTASE-VYAANQLFATLDPTLRRLQLDDLGPVVLADTVGFIRHLPHK 263
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKV 402
L+E F+ TLE++ AD+++HV+D P+ Q + V L + E + L V NKV
Sbjct: 264 LVEAFRATLEESSNADLLLHVIDAYEPERDAQVEQVLAVLGEIGANELPM---LEVYNKV 320
Query: 403 DAVPPGERVTEEYD------LLISATRGTGLAQLKEKVQDMI 438
D +P E + D + +SA G GL L++ + +++
Sbjct: 321 DLLPSVEPHIQRDDSGKPVRVWLSAQTGEGLDLLRQAIAELL 362
>gi|222616255|gb|EEE52387.1| hypothetical protein OsJ_34479 [Oryza sativa Japonica Group]
Length = 568
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 168/342 (49%), Gaps = 35/342 (10%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G VV ST L + + +++ G G + +K + T +F D L Q + L+
Sbjct: 167 GLMVVGSTYQKLSTPNPRTYIGSGKVAEIKSAIHAHDVETVIFD--DELSPGQLRNLEKS 224
Query: 183 FQ--VPVFDRYMIVIQIFKAHAKTREARLQ----------------IAIAELPY------ 218
F V V DR +++ IF A T EA LQ + +A++ Y
Sbjct: 225 FGGGVRVCDRTALILDIFNQRAATHEAALQDFRSPSKTLKNNIELKVTLAQMEYQLPRLT 284
Query: 219 -LWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFP 277
+W+ + + ++ + +L + L+K L ++ R++ RN++Q P
Sbjct: 285 KMWSHLERQSGGQVKGMGEKQIEVDKRILRTQISALRKELESVRKHRKLYRNRRQSVPIP 344
Query: 278 TVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFIS 337
V++VGYTN GK+TL+ LT D L ++LFATLD TT ++ N L DT+GFI
Sbjct: 345 VVSLVGYTNAGKSTLLNRLTGADVLA-EDKLFATLDPTTRRVLMKNGTEFLLTDTVGFIQ 403
Query: 338 NIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLV 397
+PT L+ F+ TLE+ + +I+H+VD+S+P QQ VD+ L+ L++E LV
Sbjct: 404 KLPTMLVAAFRATLEEISESSVIVHLVDISHPLAQQQIDAVDKVLKELDIESI---PKLV 460
Query: 398 VGNKVDAVPPGERVTEEYD----LLISATRGTGLAQLKEKVQ 435
V NK+D RV EE + + ISA G GL + +Q
Sbjct: 461 VWNKIDNTDDTLRVKEEAEKQGIICISAINGDGLEEFCNAIQ 502
>gi|107104042|ref|ZP_01367960.1| hypothetical protein PaerPA_01005115 [Pseudomonas aeruginosa PACS2]
gi|355643057|ref|ZP_09053066.1| GTP-binding protein HflX [Pseudomonas sp. 2_1_26]
gi|354830057|gb|EHF14116.1| GTP-binding protein HflX [Pseudomonas sp. 2_1_26]
Length = 419
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 166/315 (52%), Gaps = 24/315 (7%)
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
K G G +E L V+ + +F L Q++ L+ F+ V DR +++ IF
Sbjct: 42 KYLIGSGKVEELHDLVKAENVELVIFNHT--LTPSQERNLERAFECRVLDRTGLILDIFA 99
Query: 200 AHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLMER 249
A+T E +LQ+ +A+L ++ TR + T++ KG L++ R +L R
Sbjct: 100 QRARTHEGKLQVELAQLEHMSTRL--VRGWTHLERQKGGIGLRGPGETQLETDRRLLRVR 157
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
+++K+ L K++ QRE R ++R P V++VGYTN GK+TL ALT + + NQLF
Sbjct: 158 IRQIKQRLEKVRSQREQARRGRKRADIPAVSLVGYTNAGKSTLFNALTASE-VYAANQLF 216
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T L + ++ DT+GFI ++P L+E F+ TLE++ AD+++HV+D P
Sbjct: 217 ATLDPTLRRLQLDDLGPVVLADTVGFIRHLPHKLVEAFRATLEESSNADLLLHVIDAYEP 276
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD------LLISATR 423
+ Q + V L + E + L V NKVD +P E + D + +SA
Sbjct: 277 ERDAQVEQVLAVLGEIGANELPM---LEVYNKVDLLPSVEPHIQRDDSGKPVRVWLSAQT 333
Query: 424 GTGLAQLKEKVQDMI 438
G GL L++ + +++
Sbjct: 334 GEGLDLLRQAIAELL 348
>gi|377820984|ref|YP_004977355.1| GTP-binding proten HflX [Burkholderia sp. YI23]
gi|357935819|gb|AET89378.1| GTP-binding proten HflX [Burkholderia sp. YI23]
Length = 422
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 166/316 (52%), Gaps = 28/316 (8%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D K F G G +E L+ Q +A + + L QQ+ L+ V DR +++
Sbjct: 44 SPDAKMFIGSGKVEELRLQC--EASDVELVIFNHALAPAQQRNLEVALNRRVVDRTSLIL 101
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMV 245
IF A++ E +LQ+ +A+L YL TR I T++ KG L++ R +
Sbjct: 102 DIFAQRARSHEGKLQVELAQLQYLSTRL--IRAWTHLERQKGGIGLRGPGETQLETDRRL 159
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR 305
+ ER + LK L KL+ Q R ++ R + +V++VGYTN GK+TL ALT +
Sbjct: 160 IGERIKALKSRLEKLRRQHGTQRRQRVRNRTMSVSLVGYTNAGKSTLFNALTKAQAYAA- 218
Query: 306 NQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
+QLFATLD T+ L ++ DT+GFI +P L+ F+ TLE+ + AD+++HVV
Sbjct: 219 DQLFATLDTTSRRVFLGEEAGHVVVSDTVGFIRELPHQLVAAFRATLEETIHADVLLHVV 278
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP----GERVT-EEYD--- 416
D S+ L Q V+E L+ + + + +LV NK+DAVP GE V +EY
Sbjct: 279 DASSAVRLDQIDQVNEVLRGIGADG--IRQILVF-NKIDAVPELAARGEAVERDEYGNIS 335
Query: 417 -LLISATRGTGLAQLK 431
+ +SA G GL L+
Sbjct: 336 RVFLSARTGQGLDALR 351
>gi|315641408|ref|ZP_07896482.1| GTP-binding protein HflX [Enterococcus italicus DSM 15952]
gi|315482844|gb|EFU73366.1| GTP-binding protein HflX [Enterococcus italicus DSM 15952]
Length = 407
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 159/288 (55%), Gaps = 18/288 (6%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
++D+ + D++S GKG L+ L + V DA V + L QQ+++ V
Sbjct: 39 IIDTITQKRATVDRQSLIGKGKLQELHQWV--DAEEIDVVIFNQELSPRQQQIISQELGV 96
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI------TKGF- 238
V DR +++ IF A+++E +LQ+ +A+L YL R + T+M+ T+G
Sbjct: 97 LVLDRVQLILDIFALRARSKEGKLQVELAQLNYLLPRL--VGQGTSMSRLGAGIGTRGPG 154
Query: 239 ---LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKA 295
L++ R + +R K+K+ L ++ RE R+++++Q + ++GYTN GK+T++
Sbjct: 155 ETKLETDRRHIRDRIAKIKRELKQVAAHRERTRSRRKQQATVQIGLIGYTNAGKSTVLNR 214
Query: 296 LTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
LT D+ ++QLFATLD T + L L + DT+GFI +PT L++ F TLE++
Sbjct: 215 LTAADTY-EQDQLFATLDPLTKKWRLTEGLTVTLTDTVGFIQELPTQLVDAFHSTLEESK 273
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
DI++HVVD S+PD Q + V + ++ LELE L + NK D
Sbjct: 274 DMDILLHVVDASSPDRTQHEATVLQLMKELELENI---PTLTIYNKAD 318
>gi|117618820|ref|YP_855468.1| GTP-binding protein HflX [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560227|gb|ABK37175.1| GTP-binding protein HflX [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 428
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 177/337 (52%), Gaps = 27/337 (8%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRG-DARVTAVFVSVD 169
L E K LVSS G + S + K F G G E + QV+ DA V +
Sbjct: 27 LEELKMLVSSA-GVNALGVITTSRSAPSAKFFVGSGKAEEIASQVQMLDADVV---IFNH 82
Query: 170 VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA 229
L Q++ L+ LFQ V DR +++ IF A+T E +LQ+ +A+L +L TR +
Sbjct: 83 ALTPAQERNLERLFQCRVVDRTGLILDIFAQRARTHEGKLQVELAQLRHLSTRL--VRGW 140
Query: 230 TNMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
T++ KG L++ R +L ER + + + L+K+ QRE R + R + PTV
Sbjct: 141 THLERQKGGIGLRGPGETQLETDRRLLRERIKAILRRLDKVAKQREQGRRARNRNEVPTV 200
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
++VGYTN GK+TL LT S+ +QLFATLD T + ++ + ++ DT+GFI ++
Sbjct: 201 SLVGYTNAGKSTLFNQLTAA-SVYAADQLFATLDPTLRKLVIQDVGDVILADTVGFIRHL 259
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
P L+ FK TL++ AD+++HVVD ++ + + V + L +E +++ L++
Sbjct: 260 PHDLVAAFKATLQETREADLLLHVVDCADEQMQENIESVQQVLAEIEADDR---PQLMIC 316
Query: 400 NKVDAV---PPGERVTEE---YDLLISATRGTGLAQL 430
NK+D + P G EE + +SA G G A L
Sbjct: 317 NKIDKLGEHPVGLERDEEGRPVRVWLSAQTGEGCADL 353
>gi|339479482|gb|ABE95950.1| GTP-binding protein hflX [Bifidobacterium breve UCC2003]
Length = 501
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 176/363 (48%), Gaps = 28/363 (7%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR 156
W + + L E AL + G V D + D ++ G G + V
Sbjct: 88 WSSAVTTQAKAEESLRELAALAET-AGAVVCDGLLQHRSKPDAATYVGSGKAREIADIV- 145
Query: 157 GDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
AR A + VD L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+
Sbjct: 146 --AREEADTIVVDDDLAPSQRRALEDAAKVKVVDRTAVILDIFAQHATSREGKAQVELAQ 203
Query: 216 LPYLWTRYR------------TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNK 259
L Y+ R R A ++G ++K R V+ R +L++ + +
Sbjct: 204 LEYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRARIARLRRQIRE 263
Query: 260 LKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEG 319
+ RE+ R ++R PTVAVVGYTN GK++L LT LV N LFATLD
Sbjct: 264 MAPAREIKRGSRRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRA 322
Query: 320 MLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVD 379
+ YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q V+
Sbjct: 323 KTHDGRAFAYVDTVGFVRRLPTQLVEAFKSTLEEVGEADVIVHVVDGSHPDPFSQIDAVN 382
Query: 380 ETLQHLELEEKILEHVLVVGNKVDAVPPGER----VTEEYDLLISATRGTGLAQLKEKVQ 435
+ L +E I ++V NK D + +R + ++SA G GL L++ V+
Sbjct: 383 DVLADIEGTASIPR--ILVFNKADQIDDAKRERLAALQPDAFIVSAYSGKGLDALRDAVE 440
Query: 436 DMI 438
+++
Sbjct: 441 ELL 443
>gi|260662357|ref|ZP_05863252.1| GTP-binding protein HflX [Lactobacillus fermentum 28-3-CHN]
gi|260553048|gb|EEX25991.1| GTP-binding protein HflX [Lactobacillus fermentum 28-3-CHN]
Length = 425
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 159/303 (52%), Gaps = 26/303 (8%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
V+D SL + ++FGKG +E L + + T ++ D L Q L + ++
Sbjct: 40 VIDRLDQSLDRPNAATYFGKGKVEELTQFATAEQATT--IIANDELTPSQLANLTEATKI 97
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITK------GF- 238
V DR ++++IF A++REA++Q+ IA+L Y R T A N ++ + GF
Sbjct: 98 RVIDRTALILEIFAQRAQSREAKIQVQIAQLQYRLPRLHT---AANQSLDQQTGGGAGFA 154
Query: 239 --------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKT 290
++ R V+ ++ L+ L ++ E R K+ R PT A+VGYTN GK+
Sbjct: 155 NRGSGETQIEMDRRVIQKQIAHLRNELKEIAKSEETKRAKRDRDTIPTAALVGYTNAGKS 214
Query: 291 TLIKAL------TDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
T++ L + + + ++ LFATLD + + LP++ R L DT+GF+S +PT L+
Sbjct: 215 TIMNQLVERFGVSSEKKVFEKDMLFATLDTSVRQLTLPDQKRFLLSDTVGFVSKLPTHLI 274
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA 404
E FK TL +A AD++I V+D S+P + + DETL+ + +E + +V +K +
Sbjct: 275 EAFKSTLAEAASADLLIQVIDYSDPHHEEMMATTDETLRQIGIENIPMVYVFNKADKTEV 334
Query: 405 VPP 407
P
Sbjct: 335 SFP 337
>gi|296284134|ref|ZP_06862132.1| GTPase [Citromicrobium bathyomarinum JL354]
Length = 440
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 186/381 (48%), Gaps = 35/381 (9%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD- 169
LAE+ L +I G V +S I + + FG G +E + Q A + VD
Sbjct: 27 LAEAVGLAHAI-GIEVAESYIQPIRDVRPATLFGAGQVEQIGTQAE---LAEAELIIVDG 82
Query: 170 VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA 229
L QQ+ L++ V DR ++++IF A T E RLQ+ +A L Y +R +
Sbjct: 83 ALTAIQQRTLEEKLARKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQASRL--VRSW 140
Query: 230 TNMNITKGF-----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
T++ +G +++ R ++ R +L++ L ++K R + R ++ R +P
Sbjct: 141 THLERQRGGYGFLGGPGETQIEADRRMIRTRMARLRRDLEQVKKTRALHRERRTRAPWPV 200
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
+A+VGYTN GK+T+ LT D ++ + LFATLD T LP + + DT+GFIS+
Sbjct: 201 IALVGYTNAGKSTIFNRLTGAD-VMAEDLLFATLDPTMRAISLPAVEKAILSDTVGFISD 259
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL-------ELEEKI 391
+PT L+ F+ TLE+ AD+I+HV D++NP QK V E L+ L E EE +
Sbjct: 260 LPTQLVAAFRATLEEVTNADLILHVRDIANPASAAQKTQVLEVLRGLGVVSGGEEGEEPV 319
Query: 392 LE-HVLVVGNKVDAVPP------GERVTEEYDLL-ISATRGTGLAQLKEKVQDMILKATG 443
+L V NK D + R E+ ++ +SA G + L+ ++ D + +
Sbjct: 320 SSIPMLEVWNKWDLLADDAREDLAARAAEDDTVVPLSAETGFNMDALETRIGDALTREAS 379
Query: 444 RKNITMRVRSGGSEYQWLMKH 464
+ S G E WL H
Sbjct: 380 VCEFVLPT-SAGREIAWLHAH 399
>gi|451796267|gb|AGF66316.1| ATP/GTP-binding protein [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 496
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 168/325 (51%), Gaps = 24/325 (7%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV-LKLHQQKMLQD 181
G V+D I D ++ G GN L+ V A V D L Q L+D
Sbjct: 110 GALVLDGVIQRRDKPDAATYIGSGNAAELRDIV---IETGADTVICDGELSPGQLIQLED 166
Query: 182 LFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF--- 238
+ +V V DR +++ IF HAK+RE + Q+A+A++ Y+ R R + + + G
Sbjct: 167 VVKVKVIDRTALILDIFAQHAKSREGKAQVALAQMQYMLPRLRGWGQSLSRQMGGGRGGL 226
Query: 239 ---------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGK 289
+++ R + E+ K+++ + +K RE+ R +++R K P+VA+ GYTN GK
Sbjct: 227 ATRGPGETKIETDRRRIREKMAKMRREIADMKTGREIKRQERRRNKVPSVAIAGYTNAGK 286
Query: 290 TTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKV 349
++L+ LT LV N LFATLD T P+ DT+GF+ ++P L+E F+
Sbjct: 287 SSLLNRLTGAGVLV-ENALFATLDPTVRRAETPSGRLYTLADTVGFVRHLPHHLVEAFRS 345
Query: 350 TLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP-- 407
T+E+ +D+I+HVVD S+P+ +Q V E ++ + I +VV NK DA P
Sbjct: 346 TMEEVGDSDLILHVVDGSHPNPEEQLAAVREVIRDV---GAIDVPEIVVVNKADAADPLV 402
Query: 408 GERV--TEEYDLLISATRGTGLAQL 430
+R+ E+ + +SA G G+ +L
Sbjct: 403 LQRLLRVEKRSIAVSARTGQGIEEL 427
>gi|427411898|ref|ZP_18902100.1| GTP-binding protein HflX [Sphingobium yanoikuyae ATCC 51230]
gi|425710188|gb|EKU73211.1| GTP-binding protein HflX [Sphingobium yanoikuyae ATCC 51230]
Length = 443
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 187/382 (48%), Gaps = 37/382 (9%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVD-VLKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
+ FG G ++ + V + A V VD L QQ L+ V DR ++++IF
Sbjct: 66 TLFGSGQVDQIATLVNQE---EAELVIVDNALTPVQQSNLEKGTGAKVIDRTGLILEIFG 122
Query: 200 AHAKTREARLQIAIAELPY-------LWT---RYRTIEDATNMNITKGFLDSKRMVLMER 249
A T E RLQ+ +A L Y WT R R +RM+ +R
Sbjct: 123 ERAATNEGRLQVELAHLDYQAGRLVRSWTHLERQRGGFGFLGGPGETQIEADRRMI-RDR 181
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
K+++ L+++ R + R ++QR +P +A+VGYTN GK+TL LT + ++ + LF
Sbjct: 182 MAKIRRELDQVTKTRGLHRARRQRAPWPVIALVGYTNAGKSTLFNRLTGAE-VMAEDLLF 240
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T + +LP + + DT+GF+S++PT L+ F+ TLE+ + ADII+HV D+++P
Sbjct: 241 ATLDPTMRQIVLPGLDKAILSDTVGFVSDLPTQLIAAFRATLEEVLSADIIVHVRDIAHP 300
Query: 370 DYLQQKQHVDETLQHLELE-EKILEH---------VLVVGNKVD-----AVPPGERVTEE 414
D Q+ V + L L + E LE ++ NK+D + +
Sbjct: 301 DTEAQRDDVLDVLSELGVAGEGALERGDGEADPPPIIEAWNKLDLLDAESAAQAREIAAR 360
Query: 415 YD--LLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIRE 472
+D ++ISA G G+ L+ + + + ++ + + S G+ WL +H V R
Sbjct: 361 HDDVVIISALTGEGVEGLQRAISSRLTRGARVHSLRLPI-SDGAALAWLHEHGEVLATR- 418
Query: 473 DDTSAEHLLLDVVMTDVIMNKF 494
S + +DV ++D + +F
Sbjct: 419 --PSEAEMQVDVRLSDSGLARF 438
>gi|407714019|ref|YP_006834584.1| GTP-binding protein HflX [Burkholderia phenoliruptrix BR3459a]
gi|407236203|gb|AFT86402.1| GTP-binding protein HflX [Burkholderia phenoliruptrix BR3459a]
Length = 390
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 167/316 (52%), Gaps = 28/316 (8%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D K F G G E L+ + +A + + L QQ+ L+ V DR +++
Sbjct: 44 SPDAKMFVGSGKAEELR--LACEANDIELVIFNHALAPAQQRNLEQALNRRVVDRTSLIL 101
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMV 245
IF A++ E +LQ+ +A+L YL TR I T++ KG L++ R +
Sbjct: 102 DIFAQRARSHEGKLQVELAQLQYLSTRL--IRAWTHLERQKGGIGLRGPGETQLETDRRL 159
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR 305
+ ER + LK L+KL+ Q R ++ R + +V++VGYTN GK+TL ALT +
Sbjct: 160 IGERIKALKSRLDKLRRQHGTQRRQRSRNQTMSVSLVGYTNAGKSTLFNALTKAQAYAA- 218
Query: 306 NQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
+QLFATLD T+ L + +++ DT+GFI +P L+ F+ TLE+ + AD+++HVV
Sbjct: 219 DQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVV 278
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP----GERVT-EEYD--- 416
D S+ L Q V+E L + + + VLV NK+DAVP GE V +EY
Sbjct: 279 DASSAVRLDQIDQVNEVLHAIGAD--TIRQVLVF-NKIDAVPELAARGEAVERDEYGNIS 335
Query: 417 -LLISATRGTGLAQLK 431
+ +SA G GL L+
Sbjct: 336 RVFLSARTGQGLDTLR 351
>gi|81427732|ref|YP_394730.1| GTP-binding protein [Lactobacillus sakei subsp. sakei 23K]
gi|78609372|emb|CAI54418.1| Putative GTP-binding protein [Lactobacillus sakei subsp. sakei 23K]
Length = 423
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 172/321 (53%), Gaps = 24/321 (7%)
Query: 103 RNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQV-RGDARV 161
R T D+ + E L + VV ++ +++FGKG ++ +K + + DA +
Sbjct: 19 RQTNFDYTMRELGELARA-DNLEVVGEVRQNIDQASHRTYFGKGKVQEIKAEAAQADADI 77
Query: 162 TAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWT 221
V D L Q + L+ ++ + DR ++++IF + AKT+EA+LQ+AIAE Y
Sbjct: 78 IVVN---DELSPSQIRNLEKELEMSILDRTQLILEIFASRAKTKEAQLQVAIAEAKYQLP 134
Query: 222 RYRTIED---------ATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQ 272
R E+ +TN + L+ R ++ +R KLK L ++ Q+E+ R ++
Sbjct: 135 RLHPSENKLDQQGGGGSTNRGAGETQLELDRRLIEKRITKLKGELAQIDQQQEVQRRQRT 194
Query: 273 RQKFPTVAVVGYTNCGKTTLIKAL-------TDDDSLVPRNQLFATLDVTTHEGMLPNRL 325
+ P VA+VGYTN GK+T + + T + + ++ LFATLD + E +LPN+
Sbjct: 195 KNAVPDVALVGYTNAGKSTTMNRILQRLNPDTPEKQVFEKDMLFATLDTSVREIVLPNKQ 254
Query: 326 RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHL 385
+ L DT+GF++ +P L++ FK TL +A AD++IHVVD S+P+YL + ETL L
Sbjct: 255 KFLLSDTVGFVTKLPHHLIQAFKSTLAEAADADLLIHVVDYSDPNYLDMMKTTQETLDSL 314
Query: 386 ELEEKILEHVLVVGNKVDAVP 406
+++ V+ NK D P
Sbjct: 315 GVKDI---PVIEAYNKADLKP 332
>gi|288556892|ref|YP_003428827.1| GTP binding protein YnbA [Bacillus pseudofirmus OF4]
gi|347602419|sp|D3FTV4.1|HFLX_BACPE RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|288548052|gb|ADC51935.1| YnbA GTP binding protein [Bacillus pseudofirmus OF4]
Length = 423
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 154/284 (54%), Gaps = 12/284 (4%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
+AE ++L + +G +VV + + ++ GKG ++ L + +F D
Sbjct: 30 IAELESLAKTAKG-KVVGTITQKREKVESSTYVGKGKVQELVHLIEETEADLVIFN--DE 86
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY------- 223
L+ Q + L + V DR +++ IF + AK+RE +LQ+ +A+L YL R
Sbjct: 87 LQASQMRNLHAECGIAVIDRTQLILDIFASRAKSREGKLQVELAQLKYLLPRLSGQGLAL 146
Query: 224 -RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVV 282
R + L++ R + R ++++ L + R R K+++ +A+V
Sbjct: 147 SRQGGGIGTRGPGETQLETDRRHIRRRMNEIERQLEAVVNHRVRYREKRKKNAAIQLALV 206
Query: 283 GYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTT 342
GYTN GK+TL+ LT D+L +QLFATLD TT + LP+ +L DT+GFI ++PTT
Sbjct: 207 GYTNAGKSTLLNRLTKADTL-EEDQLFATLDPTTRQLHLPSGFSVLMSDTVGFIQDLPTT 265
Query: 343 LLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLE 386
L+ F+ TLE+ AD+++HVVD S+PDY Q ++ V + ++ LE
Sbjct: 266 LVASFRSTLEELKEADLLLHVVDCSHPDYEQHERTVIKLIEELE 309
>gi|333977750|ref|YP_004515695.1| GTP-binding protein HflX [Desulfotomaculum kuznetsovii DSM 6115]
gi|333821231|gb|AEG13894.1| GTP-binding proten HflX [Desulfotomaculum kuznetsovii DSM 6115]
Length = 427
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 179/347 (51%), Gaps = 42/347 (12%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV----- 170
A ++ G RVV + D +F G+G +VR + + VD+
Sbjct: 33 ARLADTAGARVVGRVVQRARRPDPATFLGRG-------KVREEIAPACRELGVDLVICDH 85
Query: 171 -LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRY------ 223
L Q + L++ V V DR +++ IF A+TRE +LQ+ +A+L YL+ R
Sbjct: 86 ELSPAQVRNLEEELGVRVIDRTQLILDIFARRARTREGKLQVELAQLEYLYPRLAGKGTE 145
Query: 224 --RTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAV 281
R + L++ R + R +L++ L++++ R ++R ++Q V++
Sbjct: 146 LSRLGGGIGTRGPGETKLETDRRRIKRRITELRRELDEVRRHRTLLRTRRQDVPVTLVSL 205
Query: 282 VGYTNCGKTTLIKALTDDDSLVP-RNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
VGYTN GK+TL+ ALT + VP ++LFATLD TT +LPN +L DT+GFI +P
Sbjct: 206 VGYTNAGKSTLLNALTG--AGVPAEDKLFATLDPTTRRLVLPNNDVVLLTDTVGFIRRLP 263
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
L+ F+ TLE+ AD+++HVVDVSNPDY Q + V++ L L EK ++V N
Sbjct: 264 HHLVAAFRATLEEVTEADLLLHVVDVSNPDYPDQVKAVEDVLASLGAGEK---PAILVFN 320
Query: 401 KVDAVPPGERVTEEYDLL---------ISATRGTGLAQLKEKVQDMI 438
KVD R+T E L +SA G GL +L+ + +++
Sbjct: 321 KVD------RLTAEEPWLLPSGRPAVAVSALTGQGLDELRRLIMEVL 361
>gi|317501865|ref|ZP_07960050.1| GTP-binding protein HflX [Lachnospiraceae bacterium 8_1_57FAA]
gi|331088622|ref|ZP_08337533.1| GTP-binding protein HflX [Lachnospiraceae bacterium 3_1_46FAA]
gi|336439499|ref|ZP_08619111.1| GTP-binding protein HflX [Lachnospiraceae bacterium 1_1_57FAA]
gi|316896755|gb|EFV18841.1| GTP-binding protein HflX [Lachnospiraceae bacterium 8_1_57FAA]
gi|330407579|gb|EGG87079.1| GTP-binding protein HflX [Lachnospiraceae bacterium 3_1_46FAA]
gi|336015931|gb|EGN45729.1| GTP-binding protein HflX [Lachnospiraceae bacterium 1_1_57FAA]
Length = 413
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 161/306 (52%), Gaps = 11/306 (3%)
Query: 141 SFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKA 200
++ GKG L LK + + T + D L Q L++ + DR ++++ IF A
Sbjct: 57 TYIGKGKLTELKDLI-WETDATGIICD-DELTSAQLGNLEEELSCKIIDRTLLILDIFAA 114
Query: 201 HAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLMEREQK 252
A + E ++Q+ +A+L Y +R R + L+ R ++ ER +
Sbjct: 115 RAVSGEGKIQVELAQLRYRASRLAGLGRSLSRLGGGIGTRGPGEKKLEMDRRLIRERISR 174
Query: 253 LKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATL 312
LKK L ++ RE++R ++++ A+VGYT+ GK+++ LT+ ++ LF+TL
Sbjct: 175 LKKELKDVEKHRELIRTQRKQSGLKVAALVGYTSAGKSSIENVLTNA-GILEDAMLFSTL 233
Query: 313 DVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYL 372
D TT +L N IL DT+GFI +P L+E FK TLE+A ADIIIHVVD SNP
Sbjct: 234 DTTTRSLVLDNTQEILVTDTVGFIRKLPHHLVEAFKSTLEEAKYADIIIHVVDASNPQMD 293
Query: 373 QQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKE 432
+Q V +TL+ L ++ + + +K+++ EY + SA G GLA+LK+
Sbjct: 294 EQMHVVYDTLRQLGAADRPVITLFNKQDKLESAGSYRDFQAEYSIPASAKTGEGLAELKK 353
Query: 433 KVQDMI 438
+ +++
Sbjct: 354 ALLEIV 359
>gi|404446686|ref|ZP_11011789.1| GTP-binding protein HflX [Mycobacterium vaccae ATCC 25954]
gi|403650049|gb|EJZ05336.1| GTP-binding protein HflX [Mycobacterium vaccae ATCC 25954]
Length = 482
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 165/330 (50%), Gaps = 40/330 (12%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++ G G L+ V T + L Q L+ + +V V DR +++ I
Sbjct: 106 DPSTYIGSGKAAELREIVVATGADT--VICDGELSPAQLNALEKVVKVKVIDRTALILDI 163
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------------LDS 241
F HA +RE + Q+++A++ Y+ R R ++ + +++
Sbjct: 164 FAQHATSREGKAQVSLAQMEYMLPRLRGWGESMSRQAGGRAGGAGGGVGTRGPGETKIET 223
Query: 242 KRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDS 301
R + ER KL++ + ++K R+ R ++ P+VA+VGYTN GK++L+ ALT
Sbjct: 224 DRRRIRERMSKLRREIREMKQVRDTQRGRRVANDVPSVAIVGYTNAGKSSLLNALTGAGV 283
Query: 302 LVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIII 361
LV N LFATL+ TT G LP+ + DT+GF+ ++PT L+E F+ TLE+ AD+++
Sbjct: 284 LV-ENALFATLEPTTRRGELPDGREFVLTDTVGFVRHLPTQLVEAFRSTLEEVADADLLV 342
Query: 362 HVVDVSNPDYLQQKQHVDETLQHL--ELEEKILEHVLVVGNKVDAVP-----------PG 408
HVVD S+ + L Q V + + + E + +LVV NK+DA PG
Sbjct: 343 HVVDGSDANPLAQINAVRQVVNDVVAETDAPAPPELLVV-NKIDAADGLTLAQLRRALPG 401
Query: 409 ERVTEEYDLLISATRGTGLAQLKEKVQDMI 438
+ +SA G GL +L+ ++ +MI
Sbjct: 402 A-------VFVSAHTGDGLERLQARMAEMI 424
>gi|83720345|ref|YP_442761.1| GTP-binding protein HflX [Burkholderia thailandensis E264]
gi|83654170|gb|ABC38233.1| GTP-binding protein HflX [Burkholderia thailandensis E264]
Length = 392
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 168/316 (53%), Gaps = 28/316 (8%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D F G G E L+ + +A + + L QQ+ L+ + V DR +++
Sbjct: 49 SPDAALFVGSGKAEELR--LACEANDVEIVIFNHALAPAQQRNLERVLNRRVVDRTSLIL 106
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMV 245
IF A++ E +LQ+ +A+L YL TR I T++ KG L++ R +
Sbjct: 107 DIFAQRARSHEGKLQVELAQLQYLATRL--IRAWTHLERQKGGIGLRGPGETQLETDRRL 164
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR 305
+ ER + LK L+KL+ Q R ++ R +V++VGYTN GK+TL ALT +
Sbjct: 165 IGERIKMLKSRLDKLRRQHHTQRRQRARSGTMSVSLVGYTNAGKSTLFNALTKAQAYAA- 223
Query: 306 NQLFATLDVTTHEGMLPNRL-RILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVV 364
+QLFATLD T+ L + + +I+ DT+GFI +P L+ F+ TLE+ + AD+++HVV
Sbjct: 224 DQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVV 283
Query: 365 DVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP-----GERVTEEYD--- 416
D S+ L+Q + V++ L+ E+ + +LV NK+DAVP G +EY
Sbjct: 284 DASSAVRLEQIEQVNDVLR--EIGADSIRQILVF-NKIDAVPELAARGGAVERDEYGNIS 340
Query: 417 -LLISATRGTGLAQLK 431
+ +SA G GL L+
Sbjct: 341 RVFLSARTGQGLDSLR 356
>gi|313201423|ref|YP_004040081.1| GTP-binding proten hflx [Methylovorus sp. MP688]
gi|312440739|gb|ADQ84845.1| GTP-binding proten HflX [Methylovorus sp. MP688]
Length = 379
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 192/372 (51%), Gaps = 37/372 (9%)
Query: 83 GTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSF 142
G D V V F G + R ++ + ++I+G R D K F
Sbjct: 7 GGDAAVLVSVDFGDSGYEESLQELRQLAISAGMDIRATIEGKRP---------KPDAKYF 57
Query: 143 FGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHA 202
G G + L ++ AVF + D L QQ+ L+ L + V DR +++ IF A
Sbjct: 58 VGSGKADELAESLKSHEAQVAVF-NHD-LSPSQQRNLERLLESRVVDRTGLILDIFAQRA 115
Query: 203 KTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF-----------LDSKRMVLMEREQ 251
++ E +LQ+ +A+L +L TR + T++ KG L+ R +L R +
Sbjct: 116 QSHEGKLQVELAQLEHLSTRL--VRGWTHLERQKGGIGVRGGPGETQLELDRRMLRIRVK 173
Query: 252 KLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFAT 311
+L++ L KLK QR M R ++R +V++VGYTN GK+TL LT + +QLFAT
Sbjct: 174 QLREKLAKLKQQRGMQRRSRKRSLVMSVSLVGYTNAGKSTLFNRLTQS-GVYAADQLFAT 232
Query: 312 LDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDY 371
LD T+ + +P+ ++ DT+GFI ++P L+E F TLE+A+ AD+++HVVD ++P
Sbjct: 233 LDTTSRKLYIPDGGPVVLSDTVGFIKHLPHALVEAFGATLEEAVQADLLLHVVDAASPVR 292
Query: 372 LQQKQHVDETLQHLELEEKILEHVLVVGNKVD--AVPPG-ERVTEEYD----LLISATRG 424
Q V++ L+ + E H ++V N++D + PG ER +EY + ISA G
Sbjct: 293 DDQIAQVNKVLEEIGAEHV---HQVLVLNQIDRAGLEPGLER--DEYGRICRIRISAKTG 347
Query: 425 TGLAQLKEKVQD 436
GL +++ +++
Sbjct: 348 EGLELVRQCLRE 359
>gi|227515337|ref|ZP_03945386.1| GTP-binding protein HflX [Lactobacillus fermentum ATCC 14931]
gi|227086251|gb|EEI21563.1| GTP-binding protein HflX [Lactobacillus fermentum ATCC 14931]
Length = 425
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 159/303 (52%), Gaps = 26/303 (8%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
V+D SL + ++FGKG +E L + + T ++ D L Q L + ++
Sbjct: 40 VIDRLDQSLDRPNAATYFGKGKVEELTQFATAEQATT--IIANDELTPSQLANLTEATKI 97
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITK------GF- 238
V DR ++++IF A++REA++Q+ IA+L Y R T A N ++ + GF
Sbjct: 98 RVIDRTALILEIFAQRAQSREAKIQVQIAQLQYRLPRLHT---AANQSLDQQTGGGAGFA 154
Query: 239 --------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKT 290
++ R V+ ++ L+ L ++ E R K+ R PT A+VGYTN GK+
Sbjct: 155 NRGSGETQIEMDRRVIQKQIAHLRNELKEIAKSEETKRAKRDRDTIPTAALVGYTNAGKS 214
Query: 291 TLIKAL------TDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
T++ L + + + ++ LFATLD + + LP++ R L DT+GF+S +PT L+
Sbjct: 215 TIMNQLVERFGVSSEKKVFEKDMLFATLDTSVRQLTLPDQKRFLLSDTVGFVSKLPTHLI 274
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA 404
E FK TL +A AD++I V+D S+P + + DETL+ + +E + +V +K +
Sbjct: 275 EAFKSTLAEAASADLLIQVIDYSDPHHEEMMATTDETLRQIGIENIPMVYVFNKADKTEV 334
Query: 405 VPP 407
P
Sbjct: 335 SFP 337
>gi|212555149|gb|ACJ27603.1| GTP-binding protein HflX [Shewanella piezotolerans WP3]
Length = 431
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 188/368 (51%), Gaps = 36/368 (9%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDV 170
L E K LV S G + + S + D+K F G G E L V +F
Sbjct: 27 LVELKLLVES-AGAQSIGVITGSRRAPDRKFFVGSGKAEELAAMVAATDANVVIFNHA-- 83
Query: 171 LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDAT 230
L Q++ ++ L + V DR +++ IF A+T E +LQ+ +A+L ++ TR I T
Sbjct: 84 LSPAQERNVEHLCECRVLDRTALILDIFAQRARTYEGKLQVELAQLRHMSTRL--IRGWT 141
Query: 231 NMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVA 280
++ KG L++ R +L R + + K L K+ QR+ R +QR TV+
Sbjct: 142 HLERQKGGIGLRGPGETQLETDRRLLRGRIRTINKRLAKVDKQRDQSRRARQRSDMSTVS 201
Query: 281 VVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIP 340
+VGYTN GK+TL ALT D + +QLFATLD T + LP+ I+ DT+GFI ++P
Sbjct: 202 LVGYTNAGKSTLFNALTASD-VYAADQLFATLDPTLRKLELPDG-HIVLADTVGFIRHLP 259
Query: 341 TTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGN 400
L+ FK TL++ AD+++HVVD ++ + + V L+ ++ +E L++ N
Sbjct: 260 HDLVAAFKATLQETRQADLLLHVVDSADENMADNFEQVQSVLKEIDADEI---PQLIICN 316
Query: 401 KV---DAVPPGERVTEEYD-------LLISATRGTGLAQLKEKVQDMILKATGRKNITMR 450
K+ D V P R+ +YD + +SA + GL ++E + D++ KA K + ++
Sbjct: 317 KIDLLDEVKP--RI--DYDDEGKPIRVWVSAQQQKGLELVQEAINDLVGKAV--KELALQ 370
Query: 451 VRSGGSEY 458
+ + Y
Sbjct: 371 IPASAGHY 378
>gi|184156130|ref|YP_001844470.1| GTPase [Lactobacillus fermentum IFO 3956]
gi|183227474|dbj|BAG27990.1| GTPase [Lactobacillus fermentum IFO 3956]
Length = 425
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 159/303 (52%), Gaps = 26/303 (8%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
V+D SL + ++FGKG +E L + + T ++ D L Q L + ++
Sbjct: 40 VIDRLDQSLDRPNAATYFGKGKVEELTQFTTAEQATT--IIANDELTPSQLANLTEATKI 97
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITK------GF- 238
V DR ++++IF A++REA++Q+ IA+L Y R T A N ++ + GF
Sbjct: 98 RVIDRTALILEIFAQRAQSREAKIQVQIAQLQYRLPRLHT---AANQSLDQQTGGGAGFA 154
Query: 239 --------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKT 290
++ R V+ ++ L+ L ++ E R K+ R PT A+VGYTN GK+
Sbjct: 155 NRGSGETQIEMDRRVIQKQIAHLRNELKEIAKSEETKRAKRDRDTIPTAALVGYTNAGKS 214
Query: 291 TLIKAL------TDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
T++ L + + + ++ LFATLD + + LP++ R L DT+GF+S +PT L+
Sbjct: 215 TIMNQLVERFGVSSEKKVFEKDMLFATLDTSVRQLTLPDQKRFLLSDTVGFVSKLPTHLI 274
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA 404
E FK TL +A AD++I V+D S+P + + DETL+ + +E + +V +K +
Sbjct: 275 EAFKSTLAEAASADLLIQVIDYSDPHHEEMMATTDETLRQIGIENIPMVYVFNKADKTEV 334
Query: 405 VPP 407
P
Sbjct: 335 SFP 337
>gi|254787455|ref|YP_003074884.1| GTP-binding proten HflX [Teredinibacter turnerae T7901]
gi|237686849|gb|ACR14113.1| GTP-binding proten HflX [Teredinibacter turnerae T7901]
Length = 444
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 18/274 (6%)
Query: 140 KSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFK 199
K F G G LE L+ V+ +F L Q++ L+ + V DR +++ IF
Sbjct: 56 KYFIGTGKLEELQALVQQHQAELVIFNHE--LSPSQERNLEKALECRVLDRTGLILDIFA 113
Query: 200 AHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLMER 249
A+T E +LQ+ +A+L ++ TR I T++ KG L++ R +L R
Sbjct: 114 QRARTHEGKLQVELAQLEHMSTRL--IRGWTHLERQKGGIGLRGPGETQLETDRRLLRAR 171
Query: 250 EQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLF 309
+ + K L K++ QRE R + R PTV++VGYTN GK+TL A+TD + ++QLF
Sbjct: 172 IKTIGKRLEKVRKQREQGRRARNRADIPTVSLVGYTNAGKSTLFNAITDA-GVFAQDQLF 230
Query: 310 ATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNP 369
ATLD T LP+ + DT+GFISN+P L+E F+ TLE+A +D+++HV+D ++
Sbjct: 231 ATLDPTMRRIGLPDVGPAVLADTVGFISNLPHRLVESFRATLEEASSSDLLLHVIDAADD 290
Query: 370 DYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+ + + V+ L+ ++ E L+V NK+D
Sbjct: 291 ERQRNIEQVNLVLEEIDAHEL---PCLMVYNKID 321
>gi|269127476|ref|YP_003300846.1| GTP-binding proten HflX [Thermomonospora curvata DSM 43183]
gi|268312434|gb|ACY98808.1| GTP-binding proten HflX [Thermomonospora curvata DSM 43183]
Length = 485
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 168/341 (49%), Gaps = 29/341 (8%)
Query: 116 ALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQ 175
A ++ G +V++ I D ++ G G L VR T + L Q
Sbjct: 89 AALAETAGSQVLEGLIQRRSKPDVATYIGSGKTAELAEIVRATGADT--VICDGELSPSQ 146
Query: 176 QKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYR----------- 224
+ L+++ +V V DR +++ IF HA++RE + Q+ +A+L YL R R
Sbjct: 147 LRHLEEIVKVKVIDRTALILDIFAQHARSREGKAQVELAQLEYLLPRLRGWGGNLSRQVG 206
Query: 225 ------TIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPT 278
TK LD +R + R KL++ + ++ RE MR+ ++R + P+
Sbjct: 207 GRAAGGVGIGGRGPGETKIELDRRR--IRARMAKLRRQIAEMAKTRETMRSNRRRNRIPS 264
Query: 279 VAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISN 338
VA+ GYTN GK++L+ LT LV + LFATLD T P+ DT+GF+ +
Sbjct: 265 VAIAGYTNAGKSSLLNRLTGAGVLV-EDALFATLDPTVRRAQTPSGRPFTLADTVGFVRH 323
Query: 339 IPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVV 398
+P L+E F+ TLE+ AD+I+HVVD S+ + Q V + L+ + +++ E LVV
Sbjct: 324 LPHQLVEAFRSTLEEVTQADLILHVVDGSDAEPEAQIDAVRQVLREIG-ADRVPE--LVV 380
Query: 399 GNKVDAVPPGE----RVTEEYDLLISATRGTGLAQLKEKVQ 435
NK DA P R E +++SA G G+ +L ++
Sbjct: 381 INKADAADPLTLARLRRREPGSVVVSARTGAGIEELMAAIE 421
>gi|417942388|ref|ZP_12585659.1| GTP-binding protein HflX [Bifidobacterium breve CECT 7263]
gi|376167037|gb|EHS85899.1| GTP-binding protein HflX [Bifidobacterium breve CECT 7263]
Length = 508
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 176/363 (48%), Gaps = 28/363 (7%)
Query: 97 WGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVR 156
W + + L E AL + G V D + D ++ G G + V
Sbjct: 95 WSSAVTTQAKAEESLRELAALAET-AGAVVCDGLLQHRSKPDAATYVGSGKAREIADIV- 152
Query: 157 GDARVTAVFVSVDV-LKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAE 215
AR A + VD L Q++ L+D +V V DR +++ IF HA +RE + Q+ +A+
Sbjct: 153 --AREEADTIVVDDDLAPSQRRALEDAAKVKVVDRTAVILDIFAQHATSREGKAQVELAQ 210
Query: 216 LPYLWTRYR------------TIEDATNMNITKGFLDSK----RMVLMEREQKLKKALNK 259
L Y+ R R A ++G ++K R V+ R +L++ + +
Sbjct: 211 LEYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRARIARLRRQIRE 270
Query: 260 LKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEG 319
+ RE+ R ++R PTVAVVGYTN GK++L LT LV N LFATLD
Sbjct: 271 MAPAREIKRGSRRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELV-ENALFATLDTAVRRA 329
Query: 320 MLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVD 379
+ YVDT+GF+ +PT L+E FK TLE+ AD+I+HVVD S+PD Q V+
Sbjct: 330 KTHDGRAFAYVDTVGFVRRLPTQLVEAFKSTLEEVGEADVIVHVVDGSHPDPFSQIDAVN 389
Query: 380 ETLQHLELEEKILEHVLVVGNKVDAVPPGER----VTEEYDLLISATRGTGLAQLKEKVQ 435
+ L +E I ++V NK D + +R + ++SA G GL L++ V+
Sbjct: 390 DVLADIEGTASIPR--ILVFNKADQIDDAKRERLAALQPDAFIVSAYSGKGLDALRDAVE 447
Query: 436 DMI 438
+++
Sbjct: 448 ELL 450
>gi|20807587|ref|NP_622758.1| GTPase [Thermoanaerobacter tengcongensis MB4]
gi|81481813|sp|Q8RAS5.1|HFLX_THETN RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|20516126|gb|AAM24362.1| GTPases [Thermoanaerobacter tengcongensis MB4]
Length = 428
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 170/318 (53%), Gaps = 21/318 (6%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
+K + GKG LE LK V + + V V+ D L Q K L+D V + DR +++
Sbjct: 67 GINKAHYIGKGKLEELKMFVE-NQQADLVIVN-DELTGTQIKNLEDALGVKIVDRTNLIL 124
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSKRMVLM 247
IF A+++E LQ+ +A+L Y R R + L+ R +
Sbjct: 125 DIFAKRARSKEGMLQVELAQLKYRLPRLVGLGGQLSRLGGGIGTRGPGETKLEVDRRHIR 184
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
R + +++ L +L+ R + R ++++ + P VA+VGYTN GK+TL+ ALT D+ V ++
Sbjct: 185 NRIKAIEEKLEELEKHRNLQRQRRKKNQIPVVAIVGYTNAGKSTLLNALTGADAYV-EDK 243
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T + +LP+ ++ DT+GFI +P L+E FK TLE+ AD+++HV+DV+
Sbjct: 244 LFATLDPTARKLVLPSGREVILTDTVGFIRKLPHDLVEAFKSTLEEVKYADLLLHVIDVT 303
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD---AVPPGERVTEEYDLLISATRG 424
+PD ++ + V++ L L I + V NK+D VP G D+ ISA
Sbjct: 304 SPDMDEKIKVVEKVLSDL---GAIETPRINVYNKIDLLEIVPSGNN----RDIYISAKNK 356
Query: 425 TGLAQLKEKVQDMILKAT 442
GL +L E ++ + K T
Sbjct: 357 IGLDRLLEAIERELFKET 374
>gi|385812716|ref|YP_005849107.1| GTP-binding protein HflX [Lactobacillus fermentum CECT 5716]
gi|299783613|gb|ADJ41611.1| GTP-binding protein HflX [Lactobacillus fermentum CECT 5716]
Length = 425
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 161/303 (53%), Gaps = 26/303 (8%)
Query: 126 VVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQV 185
V+D SL + ++FGKG +E L Q +VT + ++ D L Q L + ++
Sbjct: 40 VIDRLDQSLDRPNAATYFGKGKVEELT-QFATAEQVTTI-IANDELTPSQLANLTEATKI 97
Query: 186 PVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITK------GF- 238
V DR ++++IF A++REA++Q+ IA+L Y R T A N ++ + GF
Sbjct: 98 RVIDRTALILEIFAQRAQSREAKIQVQIAQLQYRLPRLHT---AANQSLDQQTGGGAGFA 154
Query: 239 --------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKT 290
++ R V+ ++ L+ L ++ E R K+ R PT A+VGYTN GK+
Sbjct: 155 NRGSGETQIEMDRRVIQKQIAHLRNELKEIAKSEETKRAKRDRDTIPTAALVGYTNAGKS 214
Query: 291 TLIKAL------TDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLL 344
T++ L + + + ++ LFATLD + + LP++ R L DT+GF+S +PT L+
Sbjct: 215 TIMNQLVERFGVSSEKKVFEKDMLFATLDTSVRQLTLPDQKRFLLSDTVGFVSKLPTHLI 274
Query: 345 EPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDA 404
E FK TL +A AD++I V+D S+P + + DETL+ + +E + +V +K +
Sbjct: 275 EAFKSTLAEAASADLLIQVIDYSDPHHEEMMATTDETLRQIGIENIPMVYVFNKADKTEV 334
Query: 405 VPP 407
P
Sbjct: 335 SFP 337
>gi|340787111|ref|YP_004752576.1| GTP-binding protein [Collimonas fungivorans Ter331]
gi|340552378|gb|AEK61753.1| GTP-binding protein [Collimonas fungivorans Ter331]
Length = 373
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 170/322 (52%), Gaps = 31/322 (9%)
Query: 136 SFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVI 195
S D F G G + + V D +F L QQ+ L+ + +V V DR +++
Sbjct: 43 SPDAALFVGSGKAQEIADAVFDDELEIVIFNHA--LSPAQQRNLERVLKVRVLDRTSLIL 100
Query: 196 QIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMV 245
IF AK+ E ++Q+ +A+L +L TR I T++ KG L++ R +
Sbjct: 101 DIFAQRAKSHEGKVQVELAQLQHLATRL--IRGWTHLERQKGGIGLRGPGETQLETDRRL 158
Query: 246 LMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPR 305
L +R + L+ L+KL Q R + R ++++VGYTN GK+TL AL +
Sbjct: 159 LGDRVKALRARLDKLHRQHATQRRARGRSATISISLVGYTNAGKSTLFNALAKA-GVYAA 217
Query: 306 NQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVD 365
+QLFATLD T+ L ++ DT+GFI +P L+ F+ TLE+ + AD+++HVVD
Sbjct: 218 DQLFATLDTTSRRVYLGEAGSVVISDTVGFIRELPHQLVAAFRATLEETIHADLLLHVVD 277
Query: 366 VSNPDYLQQKQHVDETLQHLELEEKILEHV--LVVGNKVDAV---PPGERVTEEYD---- 416
++P ++Q + V+ L L+E +H+ ++V NK+DA P ER +EYD
Sbjct: 278 AASPARMEQIEQVN-----LVLKEIGADHIPQILVWNKIDAAELEPAVER--DEYDKIQR 330
Query: 417 LLISATRGTGLAQLKEKVQDMI 438
+ +SA +G GL L++ + + +
Sbjct: 331 VFVSAQKGLGLDLLRQAIAEFV 352
>gi|338730414|ref|YP_004659806.1| GTP-binding proten HflX [Thermotoga thermarum DSM 5069]
gi|335364765|gb|AEH50710.1| GTP-binding proten HflX [Thermotoga thermarum DSM 5069]
Length = 420
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 184/341 (53%), Gaps = 25/341 (7%)
Query: 111 LAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVD- 169
L E K L+++++ V+ + + S L D ++ GKG LE LK V+ FV +D
Sbjct: 26 LEELKQLLANLE-VEVITTFVQSRLEPDPVTYLGKGKLEELKALVQA---YQPSFVVIDG 81
Query: 170 VLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA 229
+K Q K ++ + QVP+ DR +++ IF HA T E+ LQ+ +A+L Y R + +
Sbjct: 82 EVKPLQAKNIEKILQVPLKDRTQVILDIFAKHATTEESILQVELAKLSYELPRL--VGEG 139
Query: 230 TNMNITKGF----------LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTV 279
+++ T G ++ +R + R ++K L +++ RE+ R K+ P V
Sbjct: 140 KSLSRTGGGIGTRGPGEQKIEERRRYIKRRIAWIRKKLEEIRLNREIQRRKRLESDLPMV 199
Query: 280 AVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNI 339
+ VGYTN GK++L+K L+ D +V ++F++L LPN +L DT+GFI N+
Sbjct: 200 SFVGYTNAGKSSLLKVLSKSD-IVVSEKMFSSLSPVIRRVKLPNGRVVLMKDTVGFIRNV 258
Query: 340 PTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVG 399
P T++E FK TLE+ + +D++ VVDVS ++ ++ + L+ L E L+V
Sbjct: 259 PHTIIEAFKSTLEEILYSDLLALVVDVSEENFAEKMKTSIMVLKELSAESI---PRLIVF 315
Query: 400 NKVDAVPPG--ERVTEEYD--LLISATRGTGLAQLKEKVQD 436
NK+D V P E++T Y + +SA G G+ + +KV +
Sbjct: 316 NKIDLVSPEVLEKLTTIYPEAVFVSAKTGKGIDEFLQKVTE 356
>gi|90022311|ref|YP_528138.1| putative GTP-binding protein [Saccharophagus degradans 2-40]
gi|89951911|gb|ABD81926.1| Small GTP-binding protein domain [Saccharophagus degradans 2-40]
Length = 441
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 166/316 (52%), Gaps = 24/316 (7%)
Query: 139 KKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIF 198
K F G G LE L+ V+ +F L Q++ ++ V DR +++ IF
Sbjct: 55 SKYFVGTGKLEELQAMVKQHNAELVIFNHQ--LTPSQERNIEHALGCRVLDRTGLILDIF 112
Query: 199 KAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLME 248
A+T E +LQ+ +A+L ++ TR I T++ KG L++ R +L
Sbjct: 113 AQRARTHEGKLQVELAQLQHMSTRL--IRGWTHLERQKGGIGMRGPGETQLETDRRLLRA 170
Query: 249 REQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQL 308
R + + K L++++ QRE R + R + PT+++VGYTN GK+TL A+TD + ++L
Sbjct: 171 RIKSIHKRLDRVRKQREQGRRARNRAEIPTLSLVGYTNAGKSTLFNAITDA-GVYAEDKL 229
Query: 309 FATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSN 368
FATLD T L + + DT+GFISN+P L+E F+ TLE+A ADI++HVVD ++
Sbjct: 230 FATLDPTMRRIGLRDVGPAILADTVGFISNLPHRLVEAFRATLEEAASADILLHVVDAAD 289
Query: 369 PDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDL------LISAT 422
+ + + V L + + VL+V NK+D + + + DL +SA
Sbjct: 290 DERARNIEQVKLVLNEIGAGDL---PVLMVHNKIDLLSNVDARIDRDDLGKPVAVWLSAQ 346
Query: 423 RGTGLAQLKEKVQDMI 438
G G+ QL E + +++
Sbjct: 347 SGAGIEQLMEAITELL 362
>gi|338814528|ref|ZP_08626542.1| GTP-binding protein [Acetonema longum DSM 6540]
gi|337273464|gb|EGO62087.1| GTP-binding protein [Acetonema longum DSM 6540]
Length = 619
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 160/304 (52%), Gaps = 23/304 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D F GKG ++ ++ ++ V V D L QQ+ L+ ++ V DR +++ I
Sbjct: 239 DAAFFLGKGKVDEIQHLIQETE--ADVLVLDDELTPAQQRNLEQYLKIKVIDRTALILDI 296
Query: 198 FKAHAKTREARLQIAIAELPY----------LWTRYRTIEDATNMNITKGFLDSKRMVLM 247
F A++ E +LQ+ +A+L Y + +R TK +D +R +
Sbjct: 297 FAQRARSYEGKLQVELAQLRYNLPRLSGQGLVLSRLGGGIGTRGPGETKLEMDKRR--IR 354
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
R ++K + +K R + R ++++ P+V ++GYTN GK+TL+ +L++ ++ ++
Sbjct: 355 SRIHDVEKEIETVKANRALQRIRRKKSSIPSVVLIGYTNAGKSTLLNSLSEA-GVLAEDK 413
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD TT L N IL DT+GFI +P L+ F+ TLE+ AD+++HV+D+S
Sbjct: 414 LFATLDPTTRNVKLSNGQEILLTDTVGFIQKLPHHLVAAFRATLEEVKQADLLLHVLDIS 473
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTE-----EYDLLISAT 422
+P + Q V L+ LE + K ++ V NKVD + G+ + E E+ + ISA
Sbjct: 474 HPRFRAQSDAVFHVLRELESDSK---DIITVCNKVDRLESGDALREKLLKQEHAVAISAL 530
Query: 423 RGTG 426
G G
Sbjct: 531 TGEG 534
>gi|359786588|ref|ZP_09289708.1| GTP-binding protein HflX [Halomonas sp. GFAJ-1]
gi|359296119|gb|EHK60373.1| GTP-binding protein HflX [Halomonas sp. GFAJ-1]
Length = 436
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 168/316 (53%), Gaps = 23/316 (7%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQI 197
D ++F G G LE L+ + +F LK Q++ L+ + V DR +++ I
Sbjct: 54 DSRTFIGTGKLEELRAMLAAHEAELVIFNHT--LKPSQERNLERELKCRVLDRTGLILDI 111
Query: 198 FKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGF----------LDSKRMVLM 247
F A+T E +LQ+ +A+L Y+ TR I T++ KG L++ R +L
Sbjct: 112 FAQRARTHEGKLQVELAQLEYMSTRL--IRGWTHLERQKGGIGLRGPGETQLETDRRLLR 169
Query: 248 EREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQ 307
R + + K L+K++ QRE R + R + +V++VGYTN GK+TL ALT+ + + +Q
Sbjct: 170 VRIKSIHKRLDKVRSQREQNRRARSRAEIHSVSLVGYTNAGKSTLFNALTNAE-VYAADQ 228
Query: 308 LFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVS 367
LFATLD T + + ++ DT+GFI ++P L+E F+ TL++A A +++HV+D +
Sbjct: 229 LFATLDPTLRRLEIEDVGPVVLADTVGFIRHLPHKLVEAFRATLQEAAEASLLVHVIDAA 288
Query: 368 NPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYD-----LLISAT 422
+PD + V+ L+ + + VL V NK+D + R+ + + +SA
Sbjct: 289 DPDRDLNVEQVNRVLEEIGADSVP---VLKVMNKIDRLDSAPRIERDGHGSPEVVWLSAQ 345
Query: 423 RGTGLAQLKEKVQDMI 438
+G GL L E + + +
Sbjct: 346 QGQGLELLHEALTERL 361
>gi|309775905|ref|ZP_07670898.1| GTP-binding protein HflX [Erysipelotrichaceae bacterium 3_1_53]
gi|308916327|gb|EFP62074.1| GTP-binding protein HflX [Erysipelotrichaceae bacterium 3_1_53]
Length = 415
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 190/381 (49%), Gaps = 26/381 (6%)
Query: 131 IISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDR 190
I +L S K++ G G E ++ V+ VF + D+ L Q + L+D+ Q PV DR
Sbjct: 37 IQNLKSITLKTYIGIGKCEEIREYVQEQKPERIVF-NHDLSPL-QIRNLEDILQTPVMDR 94
Query: 191 YMIVIQIFKAHAKTREARLQIAIAELPYLWTRY--------RTIEDATNMNITKGFLDSK 242
+++ IF++ A TR ARLQI A+L L R R N + L+
Sbjct: 95 TELILAIFESRAVTRIARLQIECAQLKKLLPRLIGANTQLGRQSGSGKNRGAGEKQLELD 154
Query: 243 RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTD---- 298
R + R Q+L++ L K++ QR R +Q+ P V++VGYTN GK+T++ L +
Sbjct: 155 RRRINARIQELQRELKKVEAQRLTQRRSRQKSMLPLVSLVGYTNAGKSTIMNMLLEYSSP 214
Query: 299 ---DDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAM 355
D ++ ++ LFATLD + LP+ L DT+GF+S++P L++ F TLE+
Sbjct: 215 YEHDKRVLEKDMLFATLDTSIRHIDLPDGKSFLLSDTVGFVSDLPHDLVDAFHSTLEEVR 274
Query: 356 LADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEY 415
A +++ VVDVS+ +Q + +TLQ + + + + V NK D +
Sbjct: 275 YASLLVQVVDVSSEACARQMEITQDTLQQINAADIPM---ITVYNKCDQSHYPYPREHAH 331
Query: 416 DLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSE-YQWLMKHTAVSNIREDD 474
DL +SA GL +L E + + K++ M + + Y LMKH V R D+
Sbjct: 332 DLYMSAKDKVGLHELLELIHRHLYP--DEKHVIMHIPYQQTGIYSLLMKHARVIT-RTDE 388
Query: 475 TSAEHLLLDVVMTDVIMNKFK 495
H L+VV++D + K++
Sbjct: 389 EDGIH--LEVVISDHLYQKYQ 407
>gi|225075097|ref|ZP_03718296.1| hypothetical protein NEIFLAOT_00096 [Neisseria flavescens
NRL30031/H210]
gi|224953581|gb|EEG34790.1| hypothetical protein NEIFLAOT_00096 [Neisseria flavescens
NRL30031/H210]
Length = 398
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 138/244 (56%), Gaps = 12/244 (4%)
Query: 175 QQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTR----YRTIEDAT 230
Q++ L+ Q V DR +++ IF A+++E +LQ+ +A+L +L R Y ++
Sbjct: 118 QERNLEKELQCRVLDRVGLILAIFAKRAQSQEGKLQVELAQLNHLSGRLVRGYGHLQSQK 177
Query: 231 NMNITKGF----LDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTN 286
KG L++ R ++ ++ LKK L ++ QR R + + T A+VGYTN
Sbjct: 178 GGIGLKGPGETQLETDRRLIGQKITALKKQLADVRKQRATRRKSRMSGRLKTFAIVGYTN 237
Query: 287 CGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEP 346
GK++L LT D L ++QLFATLD T L + ++ DT+GF+ ++P L+
Sbjct: 238 AGKSSLFNRLTKADVLA-KDQLFATLDTTARRLFLSHEASVILTDTVGFVRDLPHKLVSA 296
Query: 347 FKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVP 406
F TLE+ +AD+++HVVD SNPD+ +Q V+E L+ + E I + LVV NK+D +P
Sbjct: 297 FSATLEETAMADVLLHVVDASNPDFERQMDDVNEVLEEIGAHE-IPQ--LVVYNKIDLLP 353
Query: 407 PGER 410
G R
Sbjct: 354 SGVR 357
>gi|290956958|ref|YP_003488140.1| GTP-ase [Streptomyces scabiei 87.22]
gi|260646484|emb|CBG69581.1| putative GTP-ase [Streptomyces scabiei 87.22]
Length = 498
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 172/325 (52%), Gaps = 23/325 (7%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V+D I D ++ G G L R V ++ V + L Q L+D+
Sbjct: 111 GALVLDGVIQRRDKPDAATYIGSGKANEL-RDVVLESGADTVICDGE-LSPGQLIHLEDV 168
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI-------- 234
+V V DR +++ IF HAK+RE + Q+A+A++ Y+ R R + + +
Sbjct: 169 VKVKVIDRTALILDIFAQHAKSREGKAQVALAQMQYMLPRLRGWGQSLSRQMGGGKGGGL 228
Query: 235 -TKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGK 289
T+G ++K R + E+ K+++ + ++K RE+ R +++R K P+VA+ GYTN GK
Sbjct: 229 ATRGPGETKIETDRRRIREKMAKMRREIAEMKTGREIKRQERRRNKVPSVAIAGYTNAGK 288
Query: 290 TTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKV 349
++L+ LT LV N LFATLD T P+ DT+GF+ ++P L+E F+
Sbjct: 289 SSLLNRLTGAGVLV-ENALFATLDPTVRRAETPSGRLYTLADTVGFVRHLPHHLVEAFRS 347
Query: 350 TLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP-- 407
T+E+ AD+I+HVVD S+P +Q V E ++ + K+ E +VV NK DA P
Sbjct: 348 TMEEVGDADLILHVVDGSHPAPEEQLAAVREVIRDVGA-TKVPE--IVVINKADAADPLT 404
Query: 408 GERV--TEEYDLLISATRGTGLAQL 430
+R+ E+ + +SA G G+ +L
Sbjct: 405 LQRLLRVEKRSIAVSARSGQGIQEL 429
>gi|429196012|ref|ZP_19188003.1| GTP-binding protein HflX [Streptomyces ipomoeae 91-03]
gi|428668276|gb|EKX67308.1| GTP-binding protein HflX [Streptomyces ipomoeae 91-03]
Length = 498
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 173/325 (53%), Gaps = 23/325 (7%)
Query: 123 GWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDL 182
G V+D I D ++ G G + L+ V T + L Q L+D+
Sbjct: 111 GALVLDGVIQRRDKPDAATYIGSGKADELRDIVLETGADT--VICDGELSPGQLIHLEDV 168
Query: 183 FQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNI-------- 234
+V V DR +++ IF HAK+RE + Q+A+A++ Y+ R R + + +
Sbjct: 169 VKVKVIDRTALILDIFAQHAKSREGKAQVALAQMQYMLPRLRGWGQSLSRQMGGGKGGGL 228
Query: 235 -TKGFLDSK----RMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGK 289
T+G ++K R + E+ K+++ + ++K RE+ R +++R K P+VA+ GYTN GK
Sbjct: 229 ATRGPGETKIETDRRRIREKMAKMRREIAEMKTGREIKRQERRRNKVPSVAIAGYTNAGK 288
Query: 290 TTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKV 349
++L+ LT LV N LFATLD T P+ L DT+GF+ ++P L+E F+
Sbjct: 289 SSLLNRLTGAGVLV-ENALFATLDPTVRRAESPSGLLYTLADTVGFVRHLPHHLVEAFRS 347
Query: 350 TLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPP-- 407
T+E+ +D+I+HVVD S+P+ +Q V E ++ + + + E +VV NK DA P
Sbjct: 348 TMEEVGESDLILHVVDGSHPNPEEQLAAVREVIRDVGATD-VPE--IVVINKADAADPLV 404
Query: 408 GERV--TEEYDLLISATRGTGLAQL 430
+R+ E+ + +SA G G+ +L
Sbjct: 405 LQRLLRNEKRSIAVSARTGQGIDEL 429
>gi|343520443|ref|ZP_08757412.1| GTP-binding protein HflX [Parvimonas sp. oral taxon 393 str. F0440]
gi|343397401|gb|EGV09935.1| GTP-binding protein HflX [Parvimonas sp. oral taxon 393 str. F0440]
Length = 424
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 156/283 (55%), Gaps = 23/283 (8%)
Query: 138 DKKSFFGKGNLELLKRQVRGDARVTAVFVSVD-VLKLHQQKMLQDLFQVPVFDRYMIVIQ 196
DK + GKG +E +K ++ A FV + L Q K L+++ + V DR +++
Sbjct: 49 DKAFYIGKGKVEEIKDYCE---KLEAEFVVFNNELTGSQVKNLEEIIGIRVIDRTNLILD 105
Query: 197 IFKAHAKTREARLQIAIAELPYLWTRYRTIEDA--------TNMNITKGFLDSKRMVLME 248
IF A+T+EA+LQ+ +A+L Y R + I + ++ R +
Sbjct: 106 IFSERARTKEAKLQVKLAKLKYTLPRLSALRSGFSRQQGGIGGKGIGEQQIELDRRTINR 165
Query: 249 REQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALT----DDDSLVP 304
+ L +++ R +R K+ K P +++VGYTN GK+TLI L D++S +
Sbjct: 166 EISSITSQLKEIEKNRNEIRKKRINSKEPIISLVGYTNAGKSTLINKLISYGKDENSEIK 225
Query: 305 ----RNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADII 360
++ LFATLD EG L N R++YVDT+GF+S+IP L+E FK TLE+ +D+I
Sbjct: 226 EVFVKDMLFATLDTFVREGSLLNGSRVMYVDTVGFVSDIPHNLVESFKGTLEEIKYSDLI 285
Query: 361 IHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVD 403
+HVVD+SN + +Q + ++ ++ LE E+K +V+ V NKVD
Sbjct: 286 LHVVDISNVNVDEQIKITNDMIKKLECEDK---NVIYVFNKVD 325
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.134 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,138,725,942
Number of Sequences: 23463169
Number of extensions: 282488243
Number of successful extensions: 1195023
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4089
Number of HSP's successfully gapped in prelim test: 3002
Number of HSP's that attempted gapping in prelim test: 1179114
Number of HSP's gapped (non-prelim): 8979
length of query: 505
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 358
effective length of database: 8,910,109,524
effective search space: 3189819209592
effective search space used: 3189819209592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)