RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy5002
(417 letters)
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus}
SCOP: b.12.1.2 c.69.1.19
Length = 449
Score = 247 bits (631), Expect = 8e-78
Identities = 82/266 (30%), Positives = 118/266 (44%), Gaps = 34/266 (12%)
Query: 135 KGHCKGSVEDMILMAYLELHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIE 194
+ S + ++ N ICVDW + + Y A ++ +G +A ++ ++
Sbjct: 79 IDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRT-AYSQASQNVRIVGAEVAYLVGVLQ 137
Query: 195 RTTGYDWCMFHLVGHSLGAHVCGIAGENIAHGKIGRITGLDPALPLFSSNITG-RLDSTD 253
+ Y H++GHSLG+H G AG +G +GRITGLDPA P F RLD +D
Sbjct: 138 SSFDYSPSNVHIIGHSLGSHAAGEAGRRT-NGAVGRITGLDPAEPCFQGTPELVRLDPSD 196
Query: 254 ATFVDIIHTCGGYL------GYYQPCGHVDFYPNGGTFIQPGCG---------------- 291
A FVD+IHT G Q GH+DF+PNGG PGC
Sbjct: 197 AQFVDVIHTDIAPFIPNLGFGMSQTAGHLDFFPNGGKE-MPGCQKNVLSQIVDIDGIWQG 255
Query: 292 -WDIGTCSHTRSYMFFTESIRTKIGFYARQCNSWSDYKKGHCKGSVEDMI-LMGEHVN-- 347
D C+H RSY ++T+SI GF C S+SD+ C + MG + +
Sbjct: 256 TRDFAACNHLRSYKYYTDSILNPDGFAGFSCASYSDFTANKCFPCSSEGCPQMGHYADRF 315
Query: 348 ----TSARGKYYLMTASSKPYALGRY 369
+YL T + +A RY
Sbjct: 316 PGRTKGVGQLFYLNTGDASNFARWRY 341
Score = 93.9 bits (233), Expect = 5e-21
Identities = 39/130 (30%), Positives = 53/130 (40%), Gaps = 15/130 (11%)
Query: 16 LDPALPLFSSNITG-RLDSTDATFVDIIHTCGGYL------GYYQPCGHVDFYPNGGTFI 68
LDPA P F RLD +DA FVD+IHT G Q GH+DF+PNGG
Sbjct: 176 LDPAEPCFQGTPELVRLDPSDAQFVDVIHTDIAPFIPNLGFGMSQTAGHLDFFPNGGKE- 234
Query: 69 QPGCGWDIVHAYTTQQPGNKEAKNDGQCRTEEKIYLVLTGFVLSVHIYQTKIGFYARQCN 128
PGC +++ + ++ C + S+ GF C
Sbjct: 235 MPGCQKNVLSQIVDIDGIWQGTRDFAACNHLRSYKY----YTDSI---LNPDGFAGFSCA 287
Query: 129 SWSDYKKGHC 138
S+SD+ C
Sbjct: 288 SYSDFTANKC 297
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET:
DDQ; 2.99A {Equus caballus}
Length = 452
Score = 245 bits (627), Expect = 3e-77
Identities = 81/266 (30%), Positives = 122/266 (45%), Gaps = 34/266 (12%)
Query: 135 KGHCKGSVEDMILMAYLELHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIE 194
+ + S + L++ N I VDWS+ A Y A I+ +G A ++ +
Sbjct: 80 RDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKA-EYTQAVQNIRIVGAETAYLIQQLL 138
Query: 195 RTTGYDWCMFHLVGHSLGAHVCGIAGENIAHGKIGRITGLDPALPLFSS-NITGRLDSTD 253
Y+ H++GHSLGAH G AG + G++GR+TGLDPA P F + RLD +D
Sbjct: 139 TELSYNPENVHIIGHSLGAHTAGEAGRRL-EGRVGRVTGLDPAEPCFQDASEEVRLDPSD 197
Query: 254 ATFVDIIHTCGGYL------GYYQPCGHVDFYPNGGTFIQPGCG---------------- 291
A FVD+IHT + G Q GH+DF+PNGG PGC
Sbjct: 198 AQFVDVIHTDASPMLPSLGFGMSQKVGHMDFFPNGGKQ-MPGCKRSSFSTFIDINGIWQG 256
Query: 292 -WDIGTCSHTRSYMFFTESIRTKIGFYARQCNSWSDYKKGHCKGSVED-MILMGEHVN-- 347
D C+H +S+ +++ SI GF A C+S+ +++ C MG + +
Sbjct: 257 AQDYLACNHLKSFEYYSSSILNPDGFLAYPCDSYDKFQENGCFPCPAGGCPKMGHYADQY 316
Query: 348 ----TSARGKYYLMTASSKPYALGRY 369
++ ++L T S Y RY
Sbjct: 317 KEKTSAVEQTFFLNTGESGDYTSWRY 342
Score = 99.7 bits (248), Expect = 5e-23
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 15/131 (11%)
Query: 15 RLDPALPLFSS-NITGRLDSTDATFVDIIHTCGGYL------GYYQPCGHVDFYPNGGTF 67
LDPA P F + RLD +DA FVD+IHT + G Q GH+DF+PNGG
Sbjct: 176 GLDPAEPCFQDASEEVRLDPSDAQFVDVIHTDASPMLPSLGFGMSQKVGHMDFFPNGGKQ 235
Query: 68 IQPGCGWDIVHAYTTQQPGNKEAKNDGQCRTEEKIYLVLTGFVLSVHIYQTKIGFYARQC 127
PGC + + A++ C + + S+ GF A C
Sbjct: 236 -MPGCKRSSFSTFIDINGIWQGAQDYLACNHLKSFEY----YSSSIL---NPDGFLAYPC 287
Query: 128 NSWSDYKKGHC 138
+S+ +++ C
Sbjct: 288 DSYDKFQENGC 298
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation,
pancreas, glycoprotein, chimeric; 2.01A {Cavia
porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B*
1n8s_A
Length = 432
Score = 244 bits (625), Expect = 4e-77
Identities = 79/249 (31%), Positives = 116/249 (46%), Gaps = 18/249 (7%)
Query: 135 KGHCKGSVEDMILMAYLELHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIE 194
+ S + ++ N ICVDW + Y A I+ +G +A ++ +
Sbjct: 80 TDSGENSWLSDMCKNMFQVEKVNCICVDWKGGS-KAQYSQASQNIRVVGAEVAYLVQVLS 138
Query: 195 RTTGYDWCMFHLVGHSLGAHVCGIAGENIAHGKIGRITGLDPALPLFSSNITG-RLDSTD 253
+ Y H++GHSLGAH G AG+ + +G +GRITGLDPA P F RLD +D
Sbjct: 139 TSLNYAPENVHIIGHSLGAHTAGEAGKRL-NGLVGRITGLDPAEPYFQDTPEEVRLDPSD 197
Query: 254 ATFVDIIHTCGGY------LGYYQPCGHVDFYPNGGTFIQPGCGWDIGTCSHTRSYMFFT 307
A FVD+IHT G Q GH+DF+PNGG PGC I +C+H RS ++
Sbjct: 198 AKFVDVIHTDISPILPSLGFGMSQKVGHMDFFPNGGKD-MPGCKTGI-SCNHHRSIEYYH 255
Query: 308 ESIRTKIGFYARQCNSWSDYKKGHCKGSVEDMI-LMGEHVN------TSARGKYYLMTAS 360
SI GF C S+ ++++ C MG + + ++L T +
Sbjct: 256 SSILNPEGFLGYPCASYDEFQESGCFPCPAKGCPKMGHFADQYPGKTNAVEQTFFLNTGA 315
Query: 361 SKPYALGRY 369
S + RY
Sbjct: 316 SDNFTRWRY 324
Score = 90.1 bits (223), Expect = 7e-20
Identities = 36/131 (27%), Positives = 46/131 (35%), Gaps = 33/131 (25%)
Query: 15 RLDPALPLFSSNITG-RLDSTDATFVDIIHTCGGY------LGYYQPCGHVDFYPNGGTF 67
LDPA P F RLD +DA FVD+IHT G Q GH+DF+PNGG
Sbjct: 176 GLDPAEPYFQDTPEEVRLDPSDAKFVDVIHTDISPILPSLGFGMSQKVGHMDFFPNGGKD 235
Query: 68 IQPGCGWDIVHAYTTQQPGNKEAKNDGQCRTEEKIYLVLTGFVLSVHIYQTKIGFYARQC 127
PGC I + GF C
Sbjct: 236 -MPGCKTGISCNH-------------------------HRSIEYYHSSILNPEGFLGYPC 269
Query: 128 NSWSDYKKGHC 138
S+ ++++ C
Sbjct: 270 ASYDEFQESGC 280
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid
degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP:
b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Length = 452
Score = 238 bits (608), Expect = 2e-74
Identities = 83/282 (29%), Positives = 118/282 (41%), Gaps = 34/282 (12%)
Query: 135 KGHCKGSVEDMILMAYLELHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIE 194
+ + ++ N ICVDW + Y A + + +G +A ++ +
Sbjct: 80 IDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRT-EYTQASYNTRVVGAEIAFLVQVLS 138
Query: 195 RTTGYDWCMFHLVGHSLGAHVCGIAGENIAHGKIGRITGLDPALPLFSSNITG-RLDSTD 253
GY HL+GHSLGAHV G AG + G +GRITGLDPA P F RLD +D
Sbjct: 139 TEMGYSPENVHLIGHSLGAHVVGEAGRRL-EGHVGRITGLDPAEPCFQGLPEEVRLDPSD 197
Query: 254 ATFVDIIHTCGGYL------GYYQPCGHVDFYPNGGTFIQPGCG---------------- 291
A FVD+IHT + G Q GH+DF+PNGG PGC
Sbjct: 198 AMFVDVIHTDSAPIIPYLGFGMSQKVGHLDFFPNGGKE-MPGCQKNILSTIVDINGIWEG 256
Query: 292 -WDIGTCSHTRSYMFFTESIRTKIGFYARQCNSWSDYKKGHCKGSVEDMI-LMGEHVN-- 347
+ C+H RSY ++ SI GF C+S+ +++ C E+ MG + +
Sbjct: 257 TQNFVACNHLRSYKYYASSILNPDGFLGYPCSSYEKFQQNDCFPCPEEGCPKMGHYADQF 316
Query: 348 ----TSARGKYYLMTASSKPYALGRYFPQPKHDTFPSSRGQL 385
+ YL T S + RY G +
Sbjct: 317 EGKTATVEQTVYLNTGDSGNFTRWRYKVSVTLSGAKKLSGYI 358
Score = 96.3 bits (239), Expect = 6e-22
Identities = 38/131 (29%), Positives = 52/131 (39%), Gaps = 15/131 (11%)
Query: 15 RLDPALPLFSSNITG-RLDSTDATFVDIIHTCGGYL------GYYQPCGHVDFYPNGGTF 67
LDPA P F RLD +DA FVD+IHT + G Q GH+DF+PNGG
Sbjct: 176 GLDPAEPCFQGLPEEVRLDPSDAMFVDVIHTDSAPIIPYLGFGMSQKVGHLDFFPNGGKE 235
Query: 68 IQPGCGWDIVHAYTTQQPGNKEAKNDGQCRTEEKIYLVLTGFVLSVHIYQTKIGFYARQC 127
PGC +I+ + +N C GF C
Sbjct: 236 -MPGCQKNILSTIVDINGIWEGTQNFVACNHLRSYKYY-------ASSILNPDGFLGYPC 287
Query: 128 NSWSDYKKGHC 138
+S+ +++ C
Sbjct: 288 SSYEKFQQNDC 298
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation;
HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2
c.69.1.19 PDB: 2ppl_A
Length = 450
Score = 227 bits (580), Expect = 3e-70
Identities = 84/266 (31%), Positives = 116/266 (43%), Gaps = 35/266 (13%)
Query: 135 KGHCKGSVEDMILMAYLELHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIE 194
+ + + ++ + N ICVDW + Y A ++ +G +A ML+ +
Sbjct: 80 IDKGEENWLLDMCKNMFKVEEVNCICVDWKKGS-QTSYTQAANNVRVVGAQVAQMLSMLS 138
Query: 195 RTTGYDWCMFHLVGHSLGAHVCGIAGENIAHGKIGRITGLDPALPLFSSNITG-RLDSTD 253
Y L+GHSLGAHV G AG +GRITGLDP F RLD TD
Sbjct: 139 ANYSYSPSQVQLIGHSLGAHVAGEAGSRT--PGLGRITGLDPVEASFQGTPEEVRLDPTD 196
Query: 254 ATFVDIIHTCGGYL------GYYQPCGHVDFYPNGGTFIQPGCG---------------- 291
A FVD+IHT L G Q GH+DF+PNGG PGC
Sbjct: 197 ADFVDVIHTDAAPLIPFLGFGTSQQMGHLDFFPNGGEE-MPGCKKNALSQIVDLDGIWEG 255
Query: 292 -WDIGTCSHTRSYMFFTESIRTKIGFYARQCNSWSDYKKGHCKGSVEDMI-LMGEHVN-- 347
D C+H RSY +++ESI GF + C S+ ++ C + MG + +
Sbjct: 256 TRDFVACNHLRSYKYYSESILNPDGFASYPCASYRAFESNKCFPCPDQGCPQMGHYADKF 315
Query: 348 ----TSARGKYYLMTASSKPYALGRY 369
+ KY+L T S +A RY
Sbjct: 316 AVKTSDETQKYFLNTGDSSNFARWRY 341
Score = 94.0 bits (233), Expect = 4e-21
Identities = 36/131 (27%), Positives = 48/131 (36%), Gaps = 15/131 (11%)
Query: 15 RLDPALPLFSSNITG-RLDSTDATFVDIIHTCGGYL------GYYQPCGHVDFYPNGGTF 67
LDP F RLD TDA FVD+IHT L G Q GH+DF+PNGG
Sbjct: 175 GLDPVEASFQGTPEEVRLDPTDADFVDVIHTDAAPLIPFLGFGTSQQMGHLDFFPNGGEE 234
Query: 68 IQPGCGWDIVHAYTTQQPGNKEAKNDGQCRTEEKIYLVLTGFVLSVHIYQTKIGFYARQC 127
PGC + + + ++ C GF + C
Sbjct: 235 -MPGCKKNALSQIVDLDGIWEGTRDFVACNHLRSYKYY-------SESILNPDGFASYPC 286
Query: 128 NSWSDYKKGHC 138
S+ ++ C
Sbjct: 287 ASYRAFESNKC 297
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 50.8 bits (121), Expect = 6e-07
Identities = 65/398 (16%), Positives = 120/398 (30%), Gaps = 127/398 (31%)
Query: 7 KPTLIQGGRLDPALPL--------------FSSNITGRLDST--DATFVDIIHTCGGYLG 50
+P + G L+ L + F+ + + D G +LG
Sbjct: 7 RPLTLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFLG 66
Query: 51 Y------YQPCGHVD---------FYPNGGTFIQPGCGWDIVHAYTTQQPGNKEAKNDGQ 95
Y G D F +++ G DI HA + +
Sbjct: 67 YVSSLVEPSKVGQFDQVLNLCLTEF---ENCYLE---GNDI-HALAAKLLQENDT----- 114
Query: 96 CRTEEKIYLVLTGFVLSVHIYQTKIGFYARQCNS--WSDYKKGHCK--------GSVEDM 145
T K ++ ++ + + + ++ NS + +G+ + G+ +D
Sbjct: 115 --TLVKTKELIKNYITARIMAKRPFD---KKSNSALFRAVGEGNAQLVAIFGGQGNTDD- 168
Query: 146 ILMAYL-EL----HDYNIICVDWSNLASNRLYPLARWTI---KYIGQ--HLADMLTTIER 195
Y EL Y+++ D ++ L L R T+ K Q ++ + L
Sbjct: 169 ----YFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSN 224
Query: 196 TTGYDW-----------CMFHLVGHSLGAHVCGIA-GE--NIAHGKIGRITGLDPALPLF 241
T D+ + L + + A + G GE + G G GL A+ +
Sbjct: 225 TPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIA 284
Query: 242 SSNITGRLDSTDATFVDIIHTCGGYL---GYYQPCGHVDFYPNGGTFIQP---------G 289
+ + +F + L G + + YPN T + P
Sbjct: 285 ET-------DSWESFFVSVRKAITVLFFIGV---RCY-EAYPN--TSLPPSILEDSLENN 331
Query: 290 CGWDIGTCSHTRSYMFFTESIR----TKIGFYARQCNS 323
G S M SI ++ Y + NS
Sbjct: 332 EG--------VPSPML---SISNLTQEQVQDYVNKTNS 358
Score = 32.7 bits (74), Expect = 0.25
Identities = 17/106 (16%), Positives = 27/106 (25%), Gaps = 27/106 (25%)
Query: 137 HCKGSVEDMILMAYLELHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIERT 196
H G I Y + + VD + + Y + +L+ + T
Sbjct: 1675 HFGGEKGKRIRENYSAM-IFET-IVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFT 1732
Query: 197 ------TGYDWCMFHLV-------------GHSLG---AHVCGIAG 220
F + GHSLG A +A
Sbjct: 1733 QPALTLMEK--AAFEDLKSKGLIPADATFAGHSLGEYAALAS-LAD 1775
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase,
decarboxylase, sulfate elimination, terminal alkene
production; 1.68A {Lyngbya majuscula 19L}
Length = 286
Score = 36.6 bits (85), Expect = 0.011
Identities = 16/76 (21%), Positives = 24/76 (31%), Gaps = 17/76 (22%)
Query: 147 LMAYLELHDYNIICVDW------SNLASNRLYPLARWTIKYIGQHLADMLTTIERTTGYD 200
+ L Y ++ D S+L Y LA + I+
Sbjct: 45 VALPLAAQGYRVVAPDLFGHGRSSHLEMVTSY--------SSLTFLAQIDRVIQE---LP 93
Query: 201 WCMFHLVGHSLGAHVC 216
LVGHS+GA +
Sbjct: 94 DQPLLLVGHSMGAMLA 109
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase,
catalysis, protonation state, AB initio calculations,
substrate bindin; 1.05A {Hevea brasiliensis} SCOP:
c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A
3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A
7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A
1dwp_A ...
Length = 257
Score = 36.2 bits (83), Expect = 0.014
Identities = 22/135 (16%), Positives = 36/135 (26%), Gaps = 7/135 (5%)
Query: 147 LMAYLELHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIERTTGYDWCMFHL 206
L LE + + +D + + + + L L + L
Sbjct: 22 LKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEK-----VIL 76
Query: 207 VGHSLGAHVCGIAGENIAHGKIGRITGLDPALPLFSSNITGRLDSTDATFVDIIHTC-GG 265
VG S G IA + KI + LP + +D F D T
Sbjct: 77 VGESCGGLNIAIAADKYCE-KIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFT 135
Query: 266 YLGYYQPCGHVDFYP 280
Y + +
Sbjct: 136 YTKDGKEITGLKLGF 150
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase,
hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F}
PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Length = 267
Score = 35.7 bits (82), Expect = 0.019
Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 6/93 (6%)
Query: 147 LMAYLELHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIERTTGYDWCMFHL 206
++A + +N+ +D L ++ + P I +L+ ++ + + + L
Sbjct: 31 IVALMRSSGHNVTALD---LGASGINPKQALQIPNFSDYLSPLMEFMASLPANEKII--L 85
Query: 207 VGHSLGAHVCGIAGENIAHGKIGRITGLDPALP 239
VGH+LG A E KI L +P
Sbjct: 86 VGHALGGLAISKAMETFPE-KISVAVFLSGLMP 117
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein,
structural genomics, protein structure initiative, PSI;
HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB:
1y7i_A* 1y7h_A*
Length = 273
Score = 35.3 bits (81), Expect = 0.028
Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
Query: 147 LMAYLELHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIERTTGYDWCMFHL 206
L LE + + +D LA++ ++ + + ++ +E + + + L
Sbjct: 23 LKPLLEAAGHKVTALD---LAASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVI--L 77
Query: 207 VGHSLGAHVCGIAGENIAHGKIGRITGLDPALP 239
VGHSLG G+A E KI L +P
Sbjct: 78 VGHSLGGMNLGLAMEKYPQ-KIYAAVFLAAFMP 109
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase
fold, carboxylesterase, Ser- hydrolase; 2.00A
{Streptococcus mutans}
Length = 292
Score = 35.0 bits (80), Expect = 0.031
Identities = 13/106 (12%), Positives = 33/106 (31%), Gaps = 19/106 (17%)
Query: 140 GSVEDMILMAYLELHDYNIICVD-----WSNLASNRLYPLARWTIKYIGQHLADMLTTIE 194
+ ++ + I+ +D +S +++ + + +L E
Sbjct: 54 STADNFANIIDKLPDSIGILTIDAPNSGYSPVSNQANVG--------LRDWVNAILMIFE 105
Query: 195 RTTGYDWCMFHLVGHSLGAHVC-GIAGENIAHGKIGRITGLDPALP 239
+ + + L HS+G I ++ GL+P
Sbjct: 106 H---FKFQSYLLCVHSIGGFAALQIMNQS--SKACLGFIGLEPTTV 146
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold,
cyanogenesis; 2.50A {Arabidopsis thaliana}
Length = 258
Score = 33.8 bits (77), Expect = 0.071
Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Query: 147 LMAYLELHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIERTTGYDWCMFHL 206
L LE + + V+ LA++ + P ++ + ++ ++ T++ + + L
Sbjct: 23 LKPLLESAGHRVTAVE---LAASGIDPRPIQAVETVDEYSKPLIETLKSLPENEEVI--L 77
Query: 207 VGHSLGAHVCGIAGENIAHGKIGRITGLDPALP 239
VG S G +A + KI + L+ LP
Sbjct: 78 VGFSFGGINIALAADIFPA-KIKVLVFLNAFLP 109
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus
subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A*
2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A
3qmm_A
Length = 181
Score = 32.8 bits (75), Expect = 0.098
Identities = 20/122 (16%), Positives = 38/122 (31%), Gaps = 28/122 (22%)
Query: 147 LMAYLELHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIERTTGYDWCMFHL 206
+ +YL ++ + + + T G L+ + + TG +
Sbjct: 22 IKSYLVSQGWSRDKLYAVD------FWDKTGTNYNNGPVLSRFVQKVLDETGAKKV--DI 73
Query: 207 VGHSLG-----------------AHVCGIAGENIAHG-KIGRITGLDPALPLFSSNITGR 248
V HS+G A+V + G N + G DP + ++I
Sbjct: 74 VAHSMGGANTLYYIKNLDGGNKVANVVTLGGAN--RLTTGKALPGTDPNQKILYTSIYSS 131
Query: 249 LD 250
D
Sbjct: 132 AD 133
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK;
1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A*
2wug_A* 2vf2_A
Length = 291
Score = 33.1 bits (76), Expect = 0.13
Identities = 8/40 (20%), Positives = 13/40 (32%), Gaps = 10/40 (25%)
Query: 178 TIKYIGQHLADMLTT--IERTTGYDWCMFHLVGHSLGAHV 215
+Y L + + R LVG++LG
Sbjct: 88 FNRYAAMALKGLFDQLGLGR--------VPLVGNALGGGT 119
>3e0x_A Lipase-esterase related protein; APC60309, clostridium
acetobutylicum ATCC 824, structural genomics, PSI-2;
HET: MSE; 1.45A {Clostridium acetobutylicum}
Length = 245
Score = 32.3 bits (74), Expect = 0.24
Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 14/68 (20%)
Query: 153 LHDYNIICVDW-----SNLASNRLYPLARWTIKYIGQHLADMLTTIERTTGYDWCMFHLV 207
L DYN I +D S T+ ++A+ +T E T L+
Sbjct: 39 LEDYNCILLDLKGHGESKGQCP-------STVYGYIDNVANFITNSEVTKHQK--NITLI 89
Query: 208 GHSLGAHV 215
G+S+G +
Sbjct: 90 GYSMGGAI 97
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural
genomics, joint center for structural genomics, JCSG;
HET: MSE PGE; 1.96A {Bacillus subtilis}
Length = 306
Score = 32.3 bits (74), Expect = 0.27
Identities = 13/68 (19%), Positives = 20/68 (29%), Gaps = 20/68 (29%)
Query: 155 DYNIICVDW-----SNLASNRLYPLARWTIKYIGQHLADMLTT--IERTTGYDWCMFHLV 207
Y VD ++ N + L D+ IE+ H++
Sbjct: 93 KYRTYAVDIIGDKNKSIPENVSGTRTDYA-----NWLLDVFDNLGIEK--------SHMI 139
Query: 208 GHSLGAHV 215
G SLG
Sbjct: 140 GLSLGGLH 147
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid
indole alkaloids, PNAE, hydrolase, serine esterase; HET:
CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Length = 264
Score = 32.2 bits (73), Expect = 0.27
Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 6/93 (6%)
Query: 147 LMAYLELHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIERTTGYDWCMFHL 206
L LE + + VD L++ + P I + ++ + + + L
Sbjct: 29 LKPLLESAGHKVTAVD---LSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVV--L 83
Query: 207 VGHSLGAHVCGIAGENIAHGKIGRITGLDPALP 239
+GHS G G+A E KI + +P
Sbjct: 84 LGHSFGGMSLGLAMETYPE-KISVAVFMSAMMP 115
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 32.5 bits (73), Expect = 0.32
Identities = 48/338 (14%), Positives = 90/338 (26%), Gaps = 100/338 (29%)
Query: 93 DGQCRTEEKIYLVLTGFVLSVHIYQTKIGFYARQCNSWSDYKKGHCKGSVEDMILMAYLE 152
+ C+ L+ T F V + S + V+ +L+ YL
Sbjct: 263 NLSCKI-----LLTTRFK-QV---TDFLSAATTTHISLDHHSMTLTPDEVKS-LLLKYL- 311
Query: 153 LHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIERTTGYD-WCMFHLVGHSL 211
+ D P + I + + D L T + + + ++ SL
Sbjct: 312 ----DCRPQDLPREVLTTN-PRR---LSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL 363
Query: 212 GAHVCGIAGENIAHGKIGRITGLDPA--------LPLF--SSNITGRL------DSTDAT 255
L+PA L +F S++I L D +
Sbjct: 364 NV--------------------LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSD 403
Query: 256 FVDIIHTCGGY-LGYYQPCGHVDFYPNGGTFIQPGCGWDIGTCSHTRSYMFFTESIRTK- 313
+ +++ Y L V+ P T P Y+ + +
Sbjct: 404 VMVVVNKLHKYSL--------VEKQPKESTISIPSI------------YLELKVKLENEY 443
Query: 314 ------IGFYARQCNSWSDYKKGHCKGSVEDMIL---MGEHVNTSARGKYYLMTASSKPY 364
+ Y N + D +G H+ + + +
Sbjct: 444 ALHRSIVDHY----NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF--RMVF 497
Query: 365 ALGRYFPQPK--HDTF----PSSRGQLRGHLRTYRKYV 396
L F + K HD+ S L+ Y+ Y+
Sbjct: 498 -LDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYI 534
Score = 30.6 bits (68), Expect = 1.3
Identities = 21/129 (16%), Positives = 42/129 (32%), Gaps = 35/129 (27%)
Query: 280 PNGGTFIQ--PGCG--W-DIGTCSHTRSYMFFTESIRTKIGF--YARQCNSWSDYKKGHC 332
P I G G W + C + ++ K+ F + W + +C
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCL--------SYKVQCKMDFKIF------WLNL--KNC 192
Query: 333 KGSVEDMILMGEHVNTSARGKYYLMTASSKPYALGRYFPQPKHDTFPSSRGQLRGHLRTY 392
S E ++ M + + + + S H + +LR L++
Sbjct: 193 N-SPETVLEMLQKLLYQIDPNWTSRSDHSSNI------KLRIHSI----QAELRRLLKS- 240
Query: 393 RKYVNSVLI 401
+ Y N +L+
Sbjct: 241 KPYENCLLV 249
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META
cleavage product hydrolase, histidine tagged protein,
alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP:
c.69.1.10
Length = 296
Score = 31.9 bits (73), Expect = 0.33
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Query: 173 PLARWTIKYIGQHLADMLTTIERTTGYDWCMFHLVGHSLGAHVC 216
P +T +HL D + + +D +VG+S+G
Sbjct: 82 PDIEYTQDRRIRHLHDFIKAM----NFD-GKVSIVGNSMGGATG 120
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond
hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia
xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A*
3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Length = 286
Score = 31.2 bits (71), Expect = 0.58
Identities = 11/76 (14%), Positives = 25/76 (32%), Gaps = 21/76 (27%)
Query: 147 LMAYLELHDYNIICVD-----WSNLASNRLYPLARWTIKYIGQHLADMLTT--IERTTGY 199
+ +++ Y +I D S+ + + ++ I+R
Sbjct: 56 VGPFVD-AGYRVILKDSPGFNKSDAVVMDEQRGLVNA-----RAVKGLMDALDIDR---- 105
Query: 200 DWCMFHLVGHSLGAHV 215
HLVG+++G
Sbjct: 106 ----AHLVGNAMGGAT 117
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene,
isopropylbenzene, META-cleavage compound hydrolase;
1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB:
1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A
2d0d_A
Length = 282
Score = 31.2 bits (71), Expect = 0.59
Identities = 9/47 (19%), Positives = 17/47 (36%), Gaps = 15/47 (31%)
Query: 172 YPLARWTIKYIGQHLADMLTT--IERTTGYDWCMFHLVGHSLGAHVC 216
Y W H+ ++ IE+ H+VG++ G +
Sbjct: 76 YSKDSWV-----DHIIGIMDALEIEK--------AHIVGNAFGGGLA 109
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase);
PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Length = 285
Score = 30.7 bits (70), Expect = 0.68
Identities = 8/40 (20%), Positives = 17/40 (42%), Gaps = 10/40 (25%)
Query: 178 TIKYIGQHLADMLTT--IERTTGYDWCMFHLVGHSLGAHV 215
+ + + ++ IE+ H+VG+S+G V
Sbjct: 85 WVGMRVEQILGLMNHFGIEK--------SHIVGNSMGGAV 116
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1
interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Length = 210
Score = 30.7 bits (69), Expect = 0.70
Identities = 11/76 (14%), Positives = 22/76 (28%), Gaps = 11/76 (14%)
Query: 143 EDMILMAYLELHDYNIICVDWSNL-ASNRLYPLARWTIKYIGQHLADMLTT--IERTTGY 199
+++ + L Y + +D L S A G LA ++ +
Sbjct: 49 QNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALELGP---- 104
Query: 200 DWCMFHLVGHSLGAHV 215
++ SL
Sbjct: 105 ----PVVISPSLSGMY 116
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 30.3 bits (67), Expect = 0.74
Identities = 7/24 (29%), Positives = 10/24 (41%), Gaps = 9/24 (37%)
Query: 357 MTASSKPYALGRYFPQPKHDTFPS 380
+ AS K YA D+ P+
Sbjct: 25 LQASLKLYA-----D----DSAPA 39
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta
hydrolase fold; 2.10A {Escherichia coli}
Length = 289
Score = 30.4 bits (69), Expect = 0.99
Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 10/34 (29%)
Query: 184 QHLADMLTT--IERTTGYDWCMFHLVGHSLGAHV 215
+ L ++ I + HL+G+S+G H
Sbjct: 95 RILKSVVDQLDIAK--------IHLLGNSMGGHS 120
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone
biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Length = 269
Score = 30.0 bits (68), Expect = 1.3
Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 20/68 (29%)
Query: 155 DYNIICVDW-----SNLASNRLYPLARWTIKYIGQHLADMLTT--IERTTGYDWCMFHLV 207
+Y++I +D + + + YI L +L + L
Sbjct: 42 NYHVITIDLPGHGEDQSSMDETW-----NFDYITTLLDRILDKYKDKS--------ITLF 88
Query: 208 GHSLGAHV 215
G+S+G V
Sbjct: 89 GYSMGGRV 96
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural
genomics, joint CEN structural genomics, JCSG; HET: PG4
UNL; 1.85A {Sulfolobus solfataricus P2}
Length = 354
Score = 29.9 bits (66), Expect = 1.6
Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 147 LMAYLELHDYNIICVDW------SNLASNRLYPLARWTIKYIGQHLADMLTTIERTTGYD 200
++ YL + +N+ +D+ L +L A W + ++++ I+R +G +
Sbjct: 85 IVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRDSGQE 144
Query: 201 WCMFHLVGHSLGAHV 215
+L G S G
Sbjct: 145 RI--YLAGESFGGIA 157
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.10A {Escherichia coli SE11}
Length = 268
Score = 29.5 bits (67), Expect = 1.7
Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 10/45 (22%)
Query: 173 PLARWTIKYIGQHLADMLTT--IERTTGYDWCMFHLVGHSLGAHV 215
++I + L L IE + +VGH+LGA V
Sbjct: 59 LAEDYSIAQMAAELHQALVAAGIEH--------YAVVGHALGALV 95
>1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A
{Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A
Length = 269
Score = 29.5 bits (66), Expect = 2.0
Identities = 19/126 (15%), Positives = 38/126 (30%), Gaps = 15/126 (11%)
Query: 188 DMLTTIERT-TGYDWCMFHLVGHSLGAHVCGIAGENIAHGKIGRITGLDPALPLFSSNIT 246
D ++ T + + GHSLG +AG ++ + R++ + ++
Sbjct: 122 DYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDLYQ-REPRLSPKNLSIFTVGGPRV 180
Query: 247 G------RLDSTDATFVDIIHTC-------GGYLGYYQPCGHVDFYPNGGTFIQPGCGWD 293
G ++ST F +H G+ P +
Sbjct: 181 GNPTFAYYVESTGIPFQRTVHKRDIVPHVPPQSFGFLHPGVESWIKSGTSNVQICTSEIE 240
Query: 294 IGTCSH 299
CS+
Sbjct: 241 TKDCSN 246
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural
genomic protein structure initiative, midwest center for
structural genomics, MCSG; HET: G1P; 2.00A {Escherichia
coli} SCOP: c.108.1.2
Length = 206
Score = 29.2 bits (66), Expect = 2.1
Identities = 5/18 (27%), Positives = 13/18 (72%)
Query: 400 LIKEAKRIGYKMALLSNT 417
++ + + G+++ +LSNT
Sbjct: 99 IMHKLREQGHRVVVLSNT 116
>1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A
{Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A*
3tgl_A
Length = 269
Score = 29.5 bits (66), Expect = 2.1
Identities = 19/129 (14%), Positives = 39/129 (30%), Gaps = 16/129 (12%)
Query: 187 ADMLTTIERT-TGYDWCMFHLVGHSLGAHVCGIAGENIAHGKIGRITGLDPALPLFSSNI 245
+++ T+ Y + GHSLG + ++ + ++ + L
Sbjct: 120 NELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDLYQ-REEGLSSSNLFLYTQGQPR 178
Query: 246 TG------RLDSTDATFV------DII-HTCGGYLGYYQPCGHVDFYPNGGTFIQPGCG- 291
G + ST + DI+ H G+ N +Q
Sbjct: 179 VGNPAFANYVVSTGIPYRRTVNERDIVPHLPPAAFGFLHAGSEYWITDNSPETVQVCTSD 238
Query: 292 WDIGTCSHT 300
+ CS++
Sbjct: 239 LETSDCSNS 247
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2,
structural genomics, protein structure initiative,
midwest for structural genomics; 2.00A {Oenococcus oeni}
Length = 272
Score = 29.3 bits (66), Expect = 2.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 204 FHLVGHSLGAHV 215
F L GHS G ++
Sbjct: 91 FILYGHSYGGYL 102
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase,
alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter
nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Length = 276
Score = 29.0 bits (65), Expect = 2.4
Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 13/64 (20%)
Query: 155 DYNIICVDWSNL-ASNRLYPLARWTIKYIGQHLADMLTT--IERTTGYDWCMFHLVGHSL 211
D+ +I +W S + + + + ++L +E F V HS
Sbjct: 53 DFRVIVPNWRGHGLSPS--EVPDFGYQEQVKDALEILDQLGVET--------FLPVSHSH 102
Query: 212 GAHV 215
G V
Sbjct: 103 GGWV 106
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic
acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET:
2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D
1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A
2es4_A 1tah_B 1qge_D 1qge_E
Length = 320
Score = 29.3 bits (65), Expect = 2.7
Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 9/70 (12%)
Query: 147 LMAYLELHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIERTTGYDWCMFHL 206
+ L+ + + S S+ G+ L + T+ TG +L
Sbjct: 33 IQEDLQQRGATVYVANLSGFQSDD-------GPNGRGEQLLAYVKTVLAATGAT--KVNL 83
Query: 207 VGHSLGAHVC 216
VGHS G
Sbjct: 84 VGHSQGGLTS 93
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1,
uncharacterized protein, structural genomics; 1.44A
{Corynebacterium glutamicum atcc 13032}
Length = 137
Score = 28.2 bits (63), Expect = 2.7
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 382 RGQLRGHLRTYRKYVNSVLIKEAKRIGYKMALLSNT 417
G L G R++ N L+ AK+ G +LSN
Sbjct: 10 AGVLDGTDEDQRRWRN--LLAAAKKNGVGTVILSND 43
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR
family, developmental protei differentiation,
neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus
musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Length = 286
Score = 28.6 bits (63), Expect = 3.8
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Query: 184 QHLADMLTTIERTTGYDWCMFHLVGHSLGAHV 215
LADM+ I + + VG GA++
Sbjct: 95 DQLADMIPCILQYLNFSTI--IGVGVGAGAYI 124
>1r3d_A Conserved hypothetical protein VC1974; structural genomics,
hydrolase, NYSGXRC, NEW YORK SGX research center for
structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP:
c.69.1.35
Length = 264
Score = 28.4 bits (64), Expect = 3.8
Identities = 9/75 (12%), Positives = 20/75 (26%), Gaps = 18/75 (24%)
Query: 147 LMAYLELHDYNIICVDWSN------LASNRLYPLARWTIKYIGQHLADMLTTIERTTGYD 200
++++L + +D + + + H
Sbjct: 35 VLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQAH------------VTS 82
Query: 201 WCMFHLVGHSLGAHV 215
LVG+SLG +
Sbjct: 83 EVPVILVGYSLGGRL 97
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein
structure in midwest center for structural genomics,
MCSG; 2.01A {Staphylococcus epidermidis}
Length = 249
Score = 28.2 bits (62), Expect = 4.6
Identities = 9/36 (25%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 178 TIKYIGQHLADMLTTIERTTGYDWCMFHLVGHSLGA 213
K + ++L+ ++ G F+ VGHS+G
Sbjct: 75 NFKENAYWIKEVLSQLKSQFGIQQ--FNFVGHSMGN 108
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural
genomics, protein structure initiative, PSI-2; HET: MSE;
1.50A {Novosphingobium aromaticivorans}
Length = 285
Score = 28.1 bits (63), Expect = 4.7
Identities = 11/67 (16%), Positives = 21/67 (31%), Gaps = 17/67 (25%)
Query: 155 DYNIICVDWSN------LASNRLYPLARWTIKYIGQHLADMLTTIERTTGYDWCMFHLVG 208
D+ ++C + Y Q+L D+ + + F +G
Sbjct: 55 DWRVLCPEMRGRGDSDYAKDPMTYQPM--------QYLQDLEALLAQ---EGIERFVAIG 103
Query: 209 HSLGAHV 215
SLG +
Sbjct: 104 TSLGGLL 110
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein
structure initiative, MCSG, midwest center for
structural genomics; 1.8A {Bacillus subtilis} SCOP:
c.69.1.31
Length = 192
Score = 27.8 bits (61), Expect = 4.8
Identities = 15/94 (15%), Positives = 23/94 (24%), Gaps = 16/94 (17%)
Query: 147 LMAYLELHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIERTTGYDWCMFHL 206
L L ++ N + L D L T+ +L
Sbjct: 25 LKKRLLADGVQADILNMPN-----------P----LQPRLEDWLDTLSLYQHTLHENTYL 69
Query: 207 VGHSLGAH-VCGIAGENIAHGKIGRITGLDPALP 239
V HSLG + +G I +
Sbjct: 70 VAHSLGCPAILRFLEHLQLRAALGGIILVSGFAK 103
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI,
protei structure initiative; HET: MSE 3OH; 1.70A
{Escherichia coli} SCOP: c.69.1.26
Length = 258
Score = 28.0 bits (63), Expect = 5.7
Identities = 5/12 (41%), Positives = 6/12 (50%)
Query: 204 FHLVGHSLGAHV 215
+G SLG V
Sbjct: 76 AIWLGWSLGGLV 87
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A,
alternative splicing, hydrolase, phosphoprotein, serine
esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Length = 316
Score = 27.9 bits (62), Expect = 5.9
Identities = 9/51 (17%), Positives = 18/51 (35%)
Query: 187 ADMLTTIERTTGYDWCMFHLVGHSLGAHVCGIAGENIAHGKIGRITGLDPA 237
D+ +E G L+GHS+G + + + + +D
Sbjct: 95 KDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPSLLGLCMIDVV 145
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta
hydrolase fold, mutant M99T; 1.50A {Streptomyces
aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Length = 277
Score = 28.0 bits (63), Expect = 6.2
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 6/41 (14%)
Query: 204 FHLVGHSLGAHVCGIAGENIA-HG--KIGRITGLDPALPLF 241
LVG S G G ++ +G +I ++ L P
Sbjct: 92 AVLVGFSTGT---GEVARYVSSYGTARIAKVAFLASLEPFL 129
>2wj9_A ARDB, intergenic-region protein; antirestriction, hydrolase
inhibitor; 1.62A {Escherichia coli}
Length = 181
Score = 27.5 bits (60), Expect = 6.9
Identities = 17/86 (19%), Positives = 24/86 (27%), Gaps = 6/86 (6%)
Query: 54 PCGHVDFY--PNGGTFIQPGCGWDIVHAYTTQQPGNKEAKNDGQCRTEEKIYLVLTGFVL 111
G + Y NGG F+ P D + N N + E +
Sbjct: 89 CGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMN---GNRAEMSPEA-AGIAACLMTY 144
Query: 112 SVHIYQTKIGFYARQCNSWSDYKKGH 137
S H +T+ DY H
Sbjct: 145 SHHACRTECYAMTVHYYRLRDYALQH 170
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold,
structural genomics, joint cente structural genomics,
JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Length = 262
Score = 27.6 bits (61), Expect = 7.3
Identities = 11/81 (13%), Positives = 19/81 (23%), Gaps = 10/81 (12%)
Query: 140 GSVEDMILMAYLELHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIERTTGY 199
+A + + S L P R + + + +
Sbjct: 77 FDKSSWSHLA-VGALSKGWAVA----MPSYELCPEVRIS-----EITQQISQAVTAAAKE 126
Query: 200 DWCMFHLVGHSLGAHVCGIAG 220
L GHS G H+
Sbjct: 127 IDGPIVLAGHSAGGHLVARML 147
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida
antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A*
1tcc_A*
Length = 317
Score = 27.8 bits (61), Expect = 7.3
Identities = 8/74 (10%), Positives = 21/74 (28%), Gaps = 10/74 (13%)
Query: 140 GSVEDMILMAYLELHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIERTTGY 199
D + Y W + L + +++ + +T + +G
Sbjct: 45 PQSFDSNWIPLSTQLGY---TPCWISPPPFMLND-----TQVNTEYMVNAITALYAGSGN 96
Query: 200 DWCMFHLVGHSLGA 213
+ ++ S G
Sbjct: 97 N--KLPVLTWSQGG 108
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic
residues, glycoprotein, hydrolase, lipid degradation,
zymogen, disulf; HET: NAG BTB; 1.49A {Candida
antarctica} PDB: 3icw_A*
Length = 316
Score = 27.8 bits (61), Expect = 7.6
Identities = 9/74 (12%), Positives = 22/74 (29%), Gaps = 10/74 (13%)
Query: 140 GSVEDMILMAYLELHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIERTTGY 199
D + Y W + L + +++ + +TT+ +G
Sbjct: 79 PQSFDSNWIPLSAQLGY---TPCWISPPPFMLND-----TQVNTEYMVNAITTLYAGSGN 130
Query: 200 DWCMFHLVGHSLGA 213
+ ++ S G
Sbjct: 131 N--KLPVLTWSQGG 142
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog,
hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas
fluorescens} PDB: 1va4_A 3hi4_A 3hea_A
Length = 271
Score = 27.6 bits (62), Expect = 7.8
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 6/41 (14%)
Query: 204 FHLVGHSLGAHVCGIAGENIAHGKIGRITGL---DPALPLF 241
LVG S+G G IA R+ GL PLF
Sbjct: 88 VTLVGFSMG---GGDVARYIARHGSARVAGLVLLGAVTPLF 125
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta
hydrolase, PLP degradation, E-2-
(acetamidomethylene)succinate; 2.26A {Mesorhizobium
loti}
Length = 314
Score = 27.8 bits (62), Expect = 7.9
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 204 FHLVGHSLGAHVC 216
LVGHSLGA
Sbjct: 136 AILVGHSLGARNS 148
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase
BPO-A2 and matrix...; protein design, bionanotechnology;
3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Length = 456
Score = 27.9 bits (62), Expect = 8.1
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 6/41 (14%)
Query: 204 FHLVGHSLGAHVCGIAGENIA-HG--KIGRITGLDPALPLF 241
LVG S+G G ++ +G +I + L P
Sbjct: 93 AVLVGFSMGT---GEVARYVSSYGTARIAAVAFLASLEPFL 130
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase,
cinnamoyl/Fe esterase, hydroxycinammates, extracellular;
HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A*
3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Length = 270
Score = 27.5 bits (61), Expect = 8.6
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 206 LVGHSLGAHVCGIAGENIAHGKIGRITGLDPALPL 240
LVGH+ G V + I ++ L PA L
Sbjct: 123 LVGHAQGGVVASMLAGLY-PDLIKKVVLLAPAATL 156
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Length = 305
Score = 27.3 bits (60), Expect = 9.1
Identities = 14/106 (13%), Positives = 33/106 (31%), Gaps = 8/106 (7%)
Query: 137 HC-KGSVEDMILMA-YLELHDYNIICVDWSNLASNRLYPLARWTIKYIGQHLADMLTTIE 194
++ +A YL + +++ D + + +T+ + T
Sbjct: 42 SGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTT---GKNSLCTVYH 98
Query: 195 RTTGYDWCMFHLVGHSLGAHVCGIAGENIAHGKIGRITGLDPALPL 240
L+ SL A +A E I+ ++ + + L
Sbjct: 99 WLQTKGTQNIGLIAASLSA---RVAYEVISDLELSFLITAVGVVNL 141
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo
sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Length = 254
Score = 27.2 bits (61), Expect = 9.3
Identities = 10/78 (12%), Positives = 21/78 (26%), Gaps = 24/78 (30%)
Query: 148 MAYLELHDYNIICVDWSNLASNRLY-----PLARWTIKYIGQHLADMLT-----TIERTT 197
+ L + ++ D R Y P + + + D + ++
Sbjct: 44 LKNLNKKLFTVVAWD------PRGYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKK-- 95
Query: 198 GYDWCMFHLVGHSLGAHV 215
L+G S G
Sbjct: 96 ------VSLLGWSDGGIT 107
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.140 0.458
Gapped
Lambda K H
0.267 0.0634 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 6,795,381
Number of extensions: 410131
Number of successful extensions: 1098
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1044
Number of HSP's successfully gapped: 74
Length of query: 417
Length of database: 6,701,793
Length adjustment: 96
Effective length of query: 321
Effective length of database: 4,021,377
Effective search space: 1290862017
Effective search space used: 1290862017
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.3 bits)