Query psy5004
Match_columns 173
No_of_seqs 55 out of 57
Neff 3.3
Searched_HMMs 29240
Date Fri Aug 16 23:23:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5004.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5004hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j8b_A CD59 glycoprotein; lipi 97.0 0.00059 2E-08 48.0 4.1 41 20-72 2-42 (79)
2 3neq_A Muscarinic M1-toxin1, m 96.9 0.00075 2.6E-08 45.6 3.8 45 20-74 1-46 (66)
3 2l03_A LY-6/neurotoxin-like pr 96.9 0.00074 2.5E-08 45.8 3.8 48 19-74 1-49 (74)
4 1mr6_A Neurotoxin; venom; NMR 96.7 0.001 3.6E-08 45.1 2.9 46 20-75 1-50 (68)
5 2jqp_A WEAK toxin 1; protein; 96.4 0.0029 9.8E-08 43.1 3.8 45 20-74 1-46 (65)
6 1kba_A Kappa-bungarotoxin; 2.3 96.4 0.0023 8E-08 43.7 3.2 43 20-75 1-47 (66)
7 3laq_U UPAR, U-PAR, urokinase 96.3 0.0028 9.5E-08 54.3 3.9 57 12-72 86-147 (277)
8 1ff4_A Muscarinic toxin/acetyl 96.3 0.0026 8.8E-08 43.2 2.9 46 20-75 1-47 (65)
9 1jgk_A Candoxin; beta sheet, s 96.3 0.0033 1.1E-07 43.1 3.4 48 20-75 1-48 (66)
10 1hc9_A Alpha-bungarotoxin; tox 96.2 0.0035 1.2E-07 43.6 3.4 44 20-74 1-48 (74)
11 2fd6_U Urokinase plasminogen a 96.2 0.0026 9E-08 54.5 3.0 58 11-72 85-150 (276)
12 1vyc_A Bucain, neurotoxin; sna 96.1 0.0028 9.5E-08 43.2 2.5 46 20-75 1-47 (65)
13 2h7z_B Irditoxin subunit B; th 96.1 0.0075 2.6E-07 42.3 4.6 49 17-74 6-57 (77)
14 1ywh_A Urokinase plasminogen a 96.0 0.0026 9E-08 55.6 2.3 58 11-72 84-149 (313)
15 2h5f_A Denmotoxin; three-finge 95.8 0.004 1.4E-07 43.7 2.2 49 17-74 6-57 (77)
16 3hh7_A Muscarinic toxin-like p 95.6 0.016 5.3E-07 39.6 4.5 45 21-75 2-46 (65)
17 1cvo_A Cardiotoxin V; cytotoxi 95.6 0.011 3.6E-07 39.8 3.5 44 20-75 1-45 (62)
18 3era_A Erabutoxin A; snake neu 95.4 0.022 7.6E-07 38.7 4.6 41 20-70 1-41 (62)
19 1ntn_A Neurotoxin I; postsynap 95.3 0.012 4E-07 40.8 3.2 42 20-74 1-46 (72)
20 1f94_A Bucandin; three-finger 95.3 0.0027 9.3E-08 43.3 -0.2 42 20-75 1-44 (63)
21 2l5s_A TGF-beta receptor type- 95.3 0.029 9.9E-07 40.4 5.2 62 16-94 2-63 (88)
22 2pjy_C TGF-beta receptor type- 95.2 0.013 4.5E-07 41.5 3.1 59 19-94 1-59 (79)
23 1vb0_A Cobrotoxin B; short-cha 95.2 0.027 9.1E-07 38.2 4.5 41 20-71 1-41 (61)
24 1lsi_A LSIII; venom, multigene 94.9 0.012 4E-07 40.1 2.2 33 43-75 10-46 (66)
25 3vts_A Cytotoxin 1; three fing 94.9 0.023 7.8E-07 39.4 3.4 32 43-74 12-43 (61)
26 2h7z_A Irditoxin subunit A; th 93.1 0.082 2.8E-06 37.2 3.6 46 20-75 8-56 (75)
27 2h62_C Bone morphogenetic prot 93.0 0.077 2.6E-06 40.7 3.5 45 18-72 34-79 (129)
28 3plc_A Beta-cardiotoxin OH-27; 92.7 0.056 1.9E-06 36.2 2.2 33 43-75 12-45 (63)
29 1ug4_A Cytotoxin 6, cardiotoxi 91.7 0.12 4.2E-06 34.5 2.9 33 43-75 11-43 (60)
30 1ntx_A Alpha-neurotoxin; NMR { 90.6 0.39 1.3E-05 32.3 4.5 40 20-71 1-40 (60)
31 3evs_C Bone morphogenetic prot 90.2 0.25 8.5E-06 37.3 3.7 48 15-73 18-67 (119)
32 1tfs_A Toxin FS2; NMR {Dendroa 88.7 0.39 1.3E-05 32.2 3.4 39 20-70 1-39 (60)
33 1fas_A Fasciculin 1; toxin; 1. 88.4 0.57 2E-05 31.7 4.1 39 20-70 1-39 (61)
34 1ywh_A Urokinase plasminogen a 88.4 0.2 6.8E-06 43.8 2.2 51 18-72 190-243 (313)
35 4aea_A Long neurotoxin 1; thre 88.0 0.39 1.3E-05 33.3 3.1 31 43-74 11-45 (71)
36 3laq_U UPAR, U-PAR, urokinase 87.2 0.35 1.2E-05 41.3 3.0 52 17-72 187-241 (277)
37 4fao_C Serine/threonine-protei 79.2 1.4 4.7E-05 32.7 3.0 44 16-73 9-53 (106)
38 2fd6_U Urokinase plasminogen a 78.8 1.3 4.6E-05 37.8 3.2 51 18-72 191-244 (276)
39 1drs_A Dendroaspin; cell adhes 77.3 1.1 3.7E-05 30.2 1.8 37 20-70 1-37 (59)
No 1
>2j8b_A CD59 glycoprotein; lipid-binding protein, lipid-binding protein MAC, membrane, GPI-anchor, complement, lipoprotein; 1.15A {Homo sapiens} SCOP: g.7.1.3 PDB: 2ux2_A 2uwr_A 1cdq_A 1cdr_A* 1cds_A* 2ofs_A 1erg_A 1erh_A
Probab=97.04 E-value=0.00059 Score=47.95 Aligned_cols=41 Identities=24% Similarity=0.656 Sum_probs=33.5
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechhh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLS 72 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdClS 72 (173)
|+||.|......|.++ ++||.++|.|+.+... ..++|+|++
T Consensus 2 L~Cy~C~~~~~~C~~~--------~~C~~~~d~C~t~~~~----~~~~k~C~~ 42 (79)
T 2j8b_A 2 LQCYNCPNPTADCKTA--------VNCSSDFDACLITKAG----LQVYNKCWK 42 (79)
T ss_dssp CEEECCSSCCTTCCCE--------EECCTTCCEEEEEEET----TEEEEEEEC
T ss_pred cCCcCCCCCCCCCccc--------eecCCCCCEeEEEEeC----CeeEecccC
Confidence 8999998765579886 7999999999877762 356799997
No 2
>3neq_A Muscarinic M1-toxin1, muscarinic toxin 1; chimeric muscarinic toxin, HM1-muscarinic receptor, snake to green mamba; 1.25A {Dendroaspis angusticeps} PDB: 2vlw_A* 3fev_A 4do8_A
Probab=96.94 E-value=0.00075 Score=45.60 Aligned_cols=45 Identities=29% Similarity=0.433 Sum_probs=35.9
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEec-CcceeEeechhhhh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERK-GAEEIITRDCLSTV 74 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~-g~~~~itRdClS~~ 74 (173)
|+||.|.+.+ |.. .++||+.+++|.|...+. +....|+|+|.++.
T Consensus 1 l~C~~~~~~~--~~~--------~~tC~~g~~~C~~~~~~~~~~~~~i~rGCa~~C 46 (66)
T 3neq_A 1 LTCVKSNSIW--FPT--------SEDCPDGQNLCFKRWQYISPRMYDFTRGCAATC 46 (66)
T ss_dssp CEEEEBCSSS--CCE--------EEECCTTCCEEEEEEEEEETTEEEEEEEEESSC
T ss_pred CCCccCCCCC--CCc--------ceEcCCCCCEEeEEEEecCCCCCEEeCCCcCcC
Confidence 6899998764 443 489999999999998887 44577899998755
No 3
>2l03_A LY-6/neurotoxin-like protein 1; LYNX1, acetylcholine receptor, endogenic neuromodulator, Thr toxins, signaling protein; NMR {Homo sapiens}
Probab=96.93 E-value=0.00074 Score=45.81 Aligned_cols=48 Identities=19% Similarity=0.478 Sum_probs=34.4
Q ss_pred ceeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEec-CcceeEeechhhhh
Q psy5004 19 ALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERK-GAEEIITRDCLSTV 74 (173)
Q Consensus 19 AL~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~-g~~~~itRdClS~~ 74 (173)
+|+||.|.+..+.|..+ ++||..+++|.++.... .....|.|+|.++.
T Consensus 1 ~L~C~~C~~~~~~c~~~--------~~C~~~~~~C~t~~~~~~~~~~~v~rgC~~~C 49 (74)
T 2l03_A 1 MLDCHVCAYNGDNCFNP--------MRCPAMVAYCMTTRTYYTPTRMKVSKSCVPRC 49 (74)
T ss_dssp CCEEECEEESSSCCCCE--------EECCTTCCEEEEEEEEEETTEEEEEEEEESCC
T ss_pred CCEeeECCCCCCcCCCC--------eEcCCCCCEEEEEEEEccCCCceEeccccCcC
Confidence 58999998522347654 79999999998876532 23367889997644
No 4
>1mr6_A Neurotoxin; venom; NMR {Bungarus multicinctus} SCOP: g.7.1.1
Probab=96.67 E-value=0.001 Score=45.11 Aligned_cols=46 Identities=30% Similarity=0.595 Sum_probs=33.8
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcc----eeEeechhhhhh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAE----EIITRDCLSTVK 75 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~----~~itRdClS~~~ 75 (173)
|+||.|.|.. |.. .++||+.+++|.|.....+.- ..|.|+|.++..
T Consensus 1 l~C~~~~~~~--~~~--------~~tCp~g~~~C~~~~~~~~~g~~~~~~i~rGCa~tCp 50 (68)
T 1mr6_A 1 MQCKTCSFYT--CPN--------SETCPDGKNICVKRSWTAVRGDGPKREIRRECAATCP 50 (68)
T ss_dssp CBCCCCSSSC--CCS--------CCBCCTTCCCEEEECCBCCSSSCCSBCCEEEECSSSS
T ss_pred CCCcCCCCCC--Ccc--------ccEeCCCCCEEEEEEEecccCccccceEeCCccCcCc
Confidence 6899998753 443 489999999999987655321 577899987663
No 5
>2jqp_A WEAK toxin 1; protein; NMR {Bungarus candidus}
Probab=96.42 E-value=0.0029 Score=43.09 Aligned_cols=45 Identities=27% Similarity=0.598 Sum_probs=34.9
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEE-EEecCcceeEeechhhhh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKI-IERKGAEEIITRDCLSTV 74 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKV-ier~g~~~~itRdClS~~ 74 (173)
|.||.|.|.. |.. .++||+.+++|.|. .........|.|+|.++.
T Consensus 1 l~C~~~~s~~--~~~--------~~tC~~g~~~Cyk~~~~~~~~g~~i~rGCa~tC 46 (65)
T 2jqp_A 1 LTCLICPEKD--CQK--------VHTCRNEEKICVKRFYDKNQLGWRAQRGCAVSC 46 (65)
T ss_dssp CEEEECSSSS--CCE--------EEECCSSCCEEEEEEEEETTTEEEEEEEEESCC
T ss_pred CCCccCCCCC--Ccc--------ceEcCCCcCEEEeeEEEccCCCCEEECCccCcC
Confidence 6899998654 433 58999999999998 665544578999999866
No 6
>1kba_A Kappa-bungarotoxin; 2.30A {Bungarus multicinctus} SCOP: g.7.1.1 PDB: 2nbt_A
Probab=96.38 E-value=0.0023 Score=43.66 Aligned_cols=43 Identities=23% Similarity=0.509 Sum_probs=33.6
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecC----cceeEeechhhhhh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKG----AEEIITRDCLSTVK 75 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g----~~~~itRdClS~~~ 75 (173)
|+||.|.+ .+ .+|||+.+++|.|.....+ ...+|+|+|.++..
T Consensus 1 l~C~~~~~------~~-------~~tC~~g~~~Cyk~~~~~~~~~~~g~~i~rGCa~tCP 47 (66)
T 1kba_A 1 RTCLISPS------ST-------PQTCPNGQDICFLKAQCDKFCSIRGPVIEQGCVATCP 47 (66)
T ss_dssp CEEEETTT------TE-------EEECCTTCCEEEEEEECCTTHHHHCCEEEEEEESSCC
T ss_pred CCCccCCC------CC-------ccCCCCCcCeEEEEEEeCccccccCCEEeCCccCcCc
Confidence 68998876 11 5899999999999987654 24678999998664
No 7
>3laq_U UPAR, U-PAR, urokinase plasminogen activator surface receptor; ATF, supar, smupar, MATF, disulfide bond, EGF-LIK hydrolase, kringle; HET: NAG; 3.20A {Mus musculus}
Probab=96.30 E-value=0.0028 Score=54.31 Aligned_cols=57 Identities=23% Similarity=0.448 Sum_probs=34.8
Q ss_pred HHHhccCceeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEec---Cc--ceeEeechhh
Q psy5004 12 SFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERK---GA--EEIITRDCLS 72 (173)
Q Consensus 12 ~~i~~geAL~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~---g~--~~~itRdClS 72 (173)
..+..|.+|.||+|.+.+..|... +...++||.+++.|+.++... ++ ...+.|+|++
T Consensus 86 ~~f~~G~sL~CysC~~~~~sC~~G----~~~~~tC~~~~d~C~~~vt~~t~~g~~~~~~~~K~C~~ 147 (277)
T 3laq_U 86 RAFPQGRYLECASCTSLDQSCERG----REQSLQCRYPTEHCIEVVTLQSTERSLKDEDYTRGCGS 147 (277)
T ss_dssp -------CCEEECEETTTTCSSSS----CCCEEECSSTTCCEEEEEEEECTTCSCCCCSEEEEEEE
T ss_pred CCcCCccceEeEeCCCCCCCccCC----CcceeECCCCCCeeeEEEEEEeecCCcccceEEecCCC
Confidence 455668999999999966589631 001589999999998555432 22 2456699964
No 8
>1ff4_A Muscarinic toxin/acetylcholine receptor binding P; three fingers motif; 1.50A {Dendroaspis angusticeps} SCOP: g.7.1.1
Probab=96.27 E-value=0.0026 Score=43.24 Aligned_cols=46 Identities=24% Similarity=0.364 Sum_probs=35.0
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEE-EEecCcceeEeechhhhhh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKI-IERKGAEEIITRDCLSTVK 75 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKV-ier~g~~~~itRdClS~~~ 75 (173)
|.||.|.|.. |.. .++||+.+++|.|. .........|+|+|.++..
T Consensus 1 l~C~~~~s~~--~~~--------~~tC~~g~~~Cyk~~~~~~~~g~~i~rGCa~tCp 47 (65)
T 1ff4_A 1 LTCVTTKSIG--GVT--------TEDCPAGQNVCFKRWHYVTPKNYDIIKGCAATCP 47 (65)
T ss_dssp CEEEEECTTS--SEE--------EEECCTTCCEEEEEEEESSSSCEEEEEEEESSCC
T ss_pred CCCccCCCCC--Ccc--------CeEcCCCcCEEeeeEEEecCCCCEEECCccCcCc
Confidence 6899997653 332 58999999999998 6655435789999998663
No 9
>1jgk_A Candoxin; beta sheet, snake venom protein, toxin; NMR {Bungarus candidus} SCOP: g.7.1.1
Probab=96.26 E-value=0.0033 Score=43.10 Aligned_cols=48 Identities=21% Similarity=0.290 Sum_probs=35.4
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechhhhhh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTVK 75 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdClS~~~ 75 (173)
|.||.|.|..| . ++..++||+.+++|.|..........|+|+|.++..
T Consensus 1 l~C~~~~s~~~--~------~~~~~tC~~g~~~Cyk~~~~~~~g~~i~rGCaatCP 48 (66)
T 1jgk_A 1 MKCKICNFDTC--R------AGELKVCASGEKYCFKESWREARGTRIERGCAATCP 48 (66)
T ss_dssp CEEEECCTTSC--S------CCEEEECCSSSCEEEEEEECCSSCCEEECCEESCCC
T ss_pred CCCccCCCCCC--c------CCCeeECCCCcCEEeeeEEeCCCCCEEECCccCcCc
Confidence 67998876642 2 112589999999999987665434789999998663
No 10
>1hc9_A Alpha-bungarotoxin; toxin/peptide, complex (toxin/peptide), acetylcholine receptor mimitope, alpha-bungarotoxin, 3- finger; 1.8A {Bungarus multicinctus} SCOP: g.7.1.1 PDB: 2qc1_A* 1abt_A 1bxp_A 1haa_A 1haj_A 1hc9_B 1hoy_A 1idg_A 1idh_A 1idi_A 1idl_A 1ik8_A 1ikc_A 1jbd_A 1kc4_A 1kfh_A 1kl8_A 1l4w_A 1ljz_A 1rgj_A ...
Probab=96.21 E-value=0.0035 Score=43.62 Aligned_cols=44 Identities=14% Similarity=0.459 Sum_probs=33.5
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCc----ceeEeechhhhh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGA----EEIITRDCLSTV 74 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~----~~~itRdClS~~ 74 (173)
|+||.|.+ . |.. .++||+.+++|.|.....+. ...|+|+|.++.
T Consensus 1 l~C~~~~~-~--~~~--------~~tCp~g~~~Cyk~~~~~~~~~~~g~~i~rGCa~tC 48 (74)
T 1hc9_A 1 IVCHTTAT-S--PIS--------AVTCPPGENLCYRKMWCDVFCSSRGKVVELGCAATC 48 (74)
T ss_dssp CEEEETTS-S--SCE--------EEECCTTCCEEEEEEECCTTHHHHCCEEEEEEESSC
T ss_pred CCCccCCC-C--Ccc--------ceEeCCCcCEEEeEEEECccccccCCEEeCCccCcC
Confidence 68999976 2 322 58999999999999876542 367889998865
No 11
>2fd6_U Urokinase plasminogen activator surface receptor; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3 PDB: 3bt2_U* 3bt1_U* 2i9b_E* 3u74_U* 3u73_U*
Probab=96.15 E-value=0.0026 Score=54.54 Aligned_cols=58 Identities=22% Similarity=0.488 Sum_probs=33.8
Q ss_pred HHHHhccCceeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEE---ec---C--cceeEeechhh
Q psy5004 11 ISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIE---RK---G--AEEIITRDCLS 72 (173)
Q Consensus 11 l~~i~~geAL~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVie---r~---g--~~~~itRdClS 72 (173)
+.++..|.+|.||+|.+.+..|-.. +....+||..++.|+.+.. .. + ....+.|+|++
T Consensus 85 ~v~~~~g~sLsC~sC~~~~~scc~g----~~~s~tCp~~~d~Cvt~~~~~s~a~~~g~~~~~~~~KgC~~ 150 (276)
T 2fd6_U 85 AVTYSRSRYLECISCGSSDMSCERG----RHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGY 150 (276)
T ss_dssp --------CCEEEEEETTTTTTTTT----CCEEEECSSTTCEEEEEEEEC----------CCSEEEEEEE
T ss_pred ceeecccCCcCCccCCCCCCccccC----CCcccCCCCCCCEEEEEEEeeeeecccCccceeeEecCCCC
Confidence 4566679999999999987655332 0115899998889998876 32 2 22346799954
No 12
>1vyc_A Bucain, neurotoxin; snake neurotoxin; NMR {Bungarus candidus} SCOP: g.7.1.1 PDB: 2h8u_A
Probab=96.13 E-value=0.0028 Score=43.17 Aligned_cols=46 Identities=22% Similarity=0.381 Sum_probs=34.4
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEE-EEecCcceeEeechhhhhh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKI-IERKGAEEIITRDCLSTVK 75 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKV-ier~g~~~~itRdClS~~~ 75 (173)
|.||.|.|.. |.. .++||+.+++|.|. .........|.|+|.++..
T Consensus 1 l~C~~~~s~~--~~~--------~~tC~~g~~~Cyk~~~~~~~~g~~i~rGCa~tCP 47 (65)
T 1vyc_A 1 RKCLIKYSQA--NES--------SKTCPSGQLLCLKKWEIGNPSGKEVKRGCVATCP 47 (65)
T ss_dssp CEEEECCTTS--CCE--------EEECCTTCCEEEEEECCSSSSCCCEEEEEESSCC
T ss_pred CCCccCCCCC--Ccc--------ceEcCCCcCEEEeeEEEecCCCCEEECCccCcCc
Confidence 6899998654 333 58999999999998 5544334778999998663
No 13
>2h7z_B Irditoxin subunit B; three-finger toxin, neurotoxin, snake venom; 1.50A {Boiga irregularis} SCOP: g.7.1.1
Probab=96.10 E-value=0.0075 Score=42.32 Aligned_cols=49 Identities=22% Similarity=0.529 Sum_probs=36.1
Q ss_pred cCceeeecccCCCC-CCCCCCCCCccccccCCCCCCceEEEEEecC-ccee-Eeechhhhh
Q psy5004 17 CSALLCYQCVSTQP-GCGTPFKWLWYPSISCPEEDDICVKIIERKG-AEEI-ITRDCLSTV 74 (173)
Q Consensus 17 geAL~CY~C~S~~P-gC~dpfn~~~~~~etCp~~~d~CvKVier~g-~~~~-itRdClS~~ 74 (173)
+-| .||+|++... .|.. .++||+.+++|.|...... ...+ |.|+|.++.
T Consensus 6 ~~~-~C~~C~~~~s~~c~~--------~~tCp~g~~~Cyk~~~~~~~~g~~~i~rGCa~tC 57 (77)
T 2h7z_B 6 PYT-LCFECNRETCSNCFK--------DNRCPPYHRTCYTLYRPDGNGEMKWAVKGCAKTC 57 (77)
T ss_dssp SCC-EECCEETTTCCSCSS--------CEECCTTCCEEEEEEEECSSSCEEEEEEEEESSC
T ss_pred CCC-ccccCCCCccCCCcc--------CcCcCCCcCEEeEEEEecCCCCceeEeCCcCCcC
Confidence 345 9999998643 4653 4899999999999877663 2234 889997765
No 14
>1ywh_A Urokinase plasminogen activator surface receptor; UPAR, three-finger fold, protein-peptide complex, hydrolase; HET: ALC NAG FUC NDG BMA MAN; 2.70A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3
Probab=95.99 E-value=0.0026 Score=55.57 Aligned_cols=58 Identities=22% Similarity=0.428 Sum_probs=36.7
Q ss_pred HHHHhccCceeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEec------Ccce--eEeechhh
Q psy5004 11 ISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERK------GAEE--IITRDCLS 72 (173)
Q Consensus 11 l~~i~~geAL~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~------g~~~--~itRdClS 72 (173)
+.++..|.+|.||+|.+.+..|... +....+||..++.|+.+.... |... .+.|+|++
T Consensus 84 ~~~~a~g~sLsCysC~~~~~sC~~g----~~~s~tCp~~~d~Cvt~~~~~s~~~~~g~~~~~~~~KgC~~ 149 (313)
T 1ywh_A 84 AVTYSRSRYLECISCGSSDMSCERG----RHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGY 149 (313)
T ss_dssp ------CCCSEEECBCSSSSCHHHH----TTCEEECSSTTCEEEEEEEEECC-----CCSCCEEEEEEEE
T ss_pred ceeeccccccCCccCCCCCCCcccC----CCcccCCCCCCCEEEEEEEeeeeeccCCccccceEecCCCC
Confidence 4566779999999999987766331 001589999999998887622 2122 67899954
No 15
>2h5f_A Denmotoxin; three-finger toxin, neurotoxin, snake venom; 1.90A {Boiga dendrophila} SCOP: g.7.1.1
Probab=95.82 E-value=0.004 Score=43.75 Aligned_cols=49 Identities=14% Similarity=0.346 Sum_probs=36.7
Q ss_pred cCceeeecccCCCC-CCCCCCCCCccccccCCCCCCceEEEEEecCc--ceeEeechhhhh
Q psy5004 17 CSALLCYQCVSTQP-GCGTPFKWLWYPSISCPEEDDICVKIIERKGA--EEIITRDCLSTV 74 (173)
Q Consensus 17 geAL~CY~C~S~~P-gC~dpfn~~~~~~etCp~~~d~CvKVier~g~--~~~itRdClS~~ 74 (173)
+-| .||+|+.... .|.. .++||+.+++|.|....... ...|.|+|.++.
T Consensus 6 ~~~-~C~~C~~~~s~~c~~--------~~tCp~g~~~Cyk~~~~~~~~g~~~i~rGCa~tC 57 (77)
T 2h5f_A 6 PHG-FCIQCNRKTWSNCSI--------GHRCLPYHMTCYTLYKPDENGEMKWAVKGCARMC 57 (77)
T ss_dssp CEE-EEECEESSSSSCTTS--------EEEEEETCCEEEEEEECCSSSCCEEEEEEEESSC
T ss_pred CCC-ccccCCCCcCCCCcc--------ccEeCCCcCEEeeEEEeCCCCCccEEECCccCcC
Confidence 345 9999998653 4543 48999999999998776542 267899997765
No 16
>3hh7_A Muscarinic toxin-like protein 3 homolog; haditoxin, three finger toxin, snake venom, neurotoxin, nicotinic acetylcholine receptors; 1.55A {Ophiophagus hannah} SCOP: g.7.1.0
Probab=95.61 E-value=0.016 Score=39.57 Aligned_cols=45 Identities=33% Similarity=0.536 Sum_probs=34.7
Q ss_pred eeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechhhhhh
Q psy5004 21 LCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTVK 75 (173)
Q Consensus 21 ~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdClS~~~ 75 (173)
.||.+.|.+| . + .++||+.+++|.|...+.+....|+|+|.++..
T Consensus 2 ~C~~~~~~~~--~-t-------~~tC~~g~~~Cyk~~~~~~~g~~i~rGCaatCp 46 (65)
T 3hh7_A 2 KCYNHQSTTP--E-T-------TEICPDSGYFCYKSSWIDGREGRIERGCTFTCP 46 (65)
T ss_dssp EEECCCTTSC--C-C-------EEECSSTTCEEEEEEEEETTEEEEEEEEESSCC
T ss_pred CcccCCcCCC--C-c-------ceECCCCCCeEeEEEEecCCCCEEeCcccCcCc
Confidence 5777765543 1 1 589999999999999888666788999987653
No 17
>1cvo_A Cardiotoxin V; cytotoxin; NMR {Naja atra} SCOP: g.7.1.1 PDB: 1kxi_A
Probab=95.59 E-value=0.011 Score=39.84 Aligned_cols=44 Identities=23% Similarity=0.342 Sum_probs=32.4
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecC-cceeEeechhhhhh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKG-AEEIITRDCLSTVK 75 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g-~~~~itRdClS~~~ 75 (173)
|.||.|. .|.. .++||+.+++|.|.....+ ....|.|+|.++..
T Consensus 1 l~C~~~~----~~~~--------~~tC~~g~~~Cyk~~~~~~~~g~~i~rGCa~tCp 45 (62)
T 1cvo_A 1 LKCHNTQ----LPFI--------YKTCPEGKNLCFKATLKKFPLKFPVKRGCADNCP 45 (62)
T ss_dssp CEECSCC----SSSC--------CEECCTTCCEEEEEEETTSSSCCCEEEEEESSCC
T ss_pred CCccCCC----CCCc--------CeEcCCCcCEEeeeEEeCCCCCcEEeCCccCcCc
Confidence 5788775 2322 4899999999999876644 34678999988663
No 18
>3era_A Erabutoxin A; snake neurotoxin, venom, postsynaptic neurotoxin; 1.70A {Laticauda semifasciata} SCOP: g.7.1.1 PDB: 2era_A
Probab=95.40 E-value=0.022 Score=38.66 Aligned_cols=41 Identities=22% Similarity=0.430 Sum_probs=31.5
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeech
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDC 70 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdC 70 (173)
|.||.+.|.+ +.. +++||+.+++|.|..........|.|+|
T Consensus 1 l~C~~~~~~~--~~~--------t~tC~~g~~~Cyk~~~~~~~g~~i~rGC 41 (62)
T 3era_A 1 RICFNHQTSQ--PQT--------TKTCSPGESSCYNKQWSDFRGTIIERGC 41 (62)
T ss_dssp CEEECCCTTS--CCC--------EEECCTTCCCEEEEEEEETTEEEEEEEE
T ss_pred CCccCCCCCC--CCC--------ceECCCCcCeeeeeEEeCCCCCEEeeeC
Confidence 6788887654 332 4899999999999877765455788999
No 19
>1ntn_A Neurotoxin I; postsynaptic neurotoxin; 1.90A {Naja oxiana} SCOP: g.7.1.1 PDB: 1w6b_A
Probab=95.34 E-value=0.012 Score=40.83 Aligned_cols=42 Identities=19% Similarity=0.440 Sum_probs=31.9
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCc----ceeEeechhhhh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGA----EEIITRDCLSTV 74 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~----~~~itRdClS~~ 74 (173)
|+||.|. + +. .++||+.+++|.|.....+. ...|+|+|.++.
T Consensus 1 l~C~~~~-----~---~~-----~~tC~~g~~~Cyk~~~~~~~~~~~g~~i~rGCaatC 46 (72)
T 1ntn_A 1 ITCYKTP-----I---IT-----SETCAPGQNLCYTKTWCDAWCGSRGKVIELGCAATC 46 (72)
T ss_dssp CEEEETT-----T---TE-----EEECCTTCCEEEEEEECCTTHHHHCCEEEEEEESSC
T ss_pred CCCccCC-----C---CC-----CeEeCCCcCeEEeEEEecccccccCCeEeCCccCcC
Confidence 6899885 2 11 58999999999999876542 367889999865
No 20
>1f94_A Bucandin; three-finger snake presynaptic neurotoxin; 0.97A {Bungarus candidus} SCOP: g.7.1.1 PDB: 1ijc_A
Probab=95.31 E-value=0.0027 Score=43.29 Aligned_cols=42 Identities=29% Similarity=0.720 Sum_probs=32.3
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEee--chhhhhh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITR--DCLSTVK 75 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itR--dClS~~~ 75 (173)
|.||.|.|.+ |.. .++||+.+++|.|...+ .+|+| +|.++..
T Consensus 1 l~C~~~~~~~--~~~--------~~tC~~g~~~Cyk~~~~----~~i~r~~GCaatCp 44 (63)
T 1f94_A 1 MECYRCGVSG--CHL--------KITCSAEETFCYKWLNK----ISNERWLGCAKTCT 44 (63)
T ss_dssp CEEEEEETTE--EEE--------EEECCTTCCEEEEEEET----TTCCEEEEEESCCC
T ss_pred CCCccCCCCC--Ccc--------ccCcCCCcCEEeeeEEE----eEEEEcCCccCcCc
Confidence 6799998654 322 58999999999998765 66789 9987653
No 21
>2l5s_A TGF-beta receptor type-1; ALK5, transforming growth factor beta, type I receptor, SIGN protein; NMR {Homo sapiens}
Probab=95.28 E-value=0.029 Score=40.41 Aligned_cols=62 Identities=26% Similarity=0.553 Sum_probs=45.8
Q ss_pred ccCceeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechhhhhhhhhhcCCcccccccccCcC
Q psy5004 16 RCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTVKAFRTDIPADRYEGCRAAAK 94 (173)
Q Consensus 16 ~geAL~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdClS~~~~~r~dipad~yegcr~~a~ 94 (173)
|+.+|+|| |. .|.++ | .||.. +-.|.+.+++..+.+.++|+||+. ..-+|...---|+.+..
T Consensus 2 ~~~~l~C~-C~----~C~~~-n------~tC~t-~g~Cf~sv~~~~g~~~~~~gC~~~----~e~~p~~~~~~C~~~~~ 63 (88)
T 2l5s_A 2 SATALQCF-CH----LCTKD-N------FTCVT-DGLCFVSVTETTDKVIHNSMCIAE----IDLIPRDRPFVCAPSSK 63 (88)
T ss_dssp CTTSEEEE-CS----SCTTT-T------TEEEE-SSEEEEEEEECSSCEEEEEEEECG----GGCSSSSSCGGGCSCCC
T ss_pred CceeEEEE-CC----CCCCC-C------CEEec-CCEEeEEEEECCCCEEEEECCCCh----hhcCCCCCceEecCCCC
Confidence 67899999 94 38765 3 58854 589999888888888999999983 23466655556876554
No 22
>2pjy_C TGF-beta receptor type-1; ternary complex, three finger toxin, cytokine-cytokine recep complex; 3.00A {Homo sapiens} PDB: 3kfd_I
Probab=95.21 E-value=0.013 Score=41.53 Aligned_cols=59 Identities=27% Similarity=0.622 Sum_probs=43.7
Q ss_pred ceeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechhhhhhhhhhcCCcccccccccCcC
Q psy5004 19 ALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTVKAFRTDIPADRYEGCRAAAK 94 (173)
Q Consensus 19 AL~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdClS~~~~~r~dipad~yegcr~~a~ 94 (173)
||+|| |. .|.++ | .||.. +..|.+.+++..+.+.++|+||+.- .-+|...--.|+.+..
T Consensus 1 ~LkC~-C~----~C~~~-n------~tC~t-~g~Cf~sv~~~~g~~~~~~gC~~~~----e~~p~~~~~~C~~~~~ 59 (79)
T 2pjy_C 1 ALQCF-CH----LCTKD-N------FTCVT-DGLCFVSVTETTDKVIHNSSCIAEI----DLIPRDRPFVCAPSSK 59 (79)
T ss_dssp CEEEE-CT----TCTTT-T------TEEEE-SSEEEEEEECSSSCCEEEEEEECTT----TSSSSSSCGGGCCHHH
T ss_pred CcEEE-CC----CCCCC-C------CEEcC-CCEEeEEEEECCCCEEEEECCCChh----HcCCCCCCcEeCCCCC
Confidence 69999 95 38776 3 68844 6999999988888999999999832 2456555556876543
No 23
>1vb0_A Cobrotoxin B; short-chain neurotoxin, three-finger toxin; HET: SO4; 0.92A {Naja atra} SCOP: g.7.1.1 PDB: 1onj_A* 1je9_A 1nor_A 1iq9_A 1nea_A 3nds_A 1cod_A 1coe_A 1v6p_A 1g6m_A 1qkd_A 1qke_A 5ebx_A 1era_A 1fra_A 3ebx_A 6ebx_A 1nxb_A
Probab=95.18 E-value=0.027 Score=38.17 Aligned_cols=41 Identities=29% Similarity=0.401 Sum_probs=31.0
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCL 71 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdCl 71 (173)
|.||.+.|..| .. ++|||+ +++|-|..........|.|+|.
T Consensus 1 l~C~~~~~~~~--~~--------~~tC~~-~~~Cyk~~~~~~~g~~i~rGCa 41 (61)
T 1vb0_A 1 LECHNQQSSQT--PT--------TKTCSG-ETNCYKKWWSDHRGTIIERGCG 41 (61)
T ss_dssp CEEECCCTTSC--CC--------EEECSS-CSCEEEEEEEETTEEEEEEEES
T ss_pred CEeeCCCCCCC--cc--------ccCCCC-cCeeEeeEEcCCCCCEEeeeCc
Confidence 57888876653 22 589999 9999998776543477889996
No 24
>1lsi_A LSIII; venom, multigene family, neurotoxin; NMR {Laticauda semifasciata} SCOP: g.7.1.1
Probab=94.95 E-value=0.012 Score=40.14 Aligned_cols=33 Identities=18% Similarity=0.401 Sum_probs=25.9
Q ss_pred cccCCCCCCceEEEEEecCc----ceeEeechhhhhh
Q psy5004 43 SISCPEEDDICVKIIERKGA----EEIITRDCLSTVK 75 (173)
Q Consensus 43 ~etCp~~~d~CvKVier~g~----~~~itRdClS~~~ 75 (173)
.++||+.+++|.|.....+. ...|+|+|.++..
T Consensus 10 ~~tC~~g~~~Cyk~~~~~~~~~~rg~~i~rGCa~tCP 46 (66)
T 1lsi_A 10 TQTCPSGQEICYVKSWCNAWCSSRGKVLEFGCAATCP 46 (66)
T ss_dssp CCCCCSSCCEEEEEECCCTTCTTSCCCCEEEEESSCC
T ss_pred ccCCCCCcCEEEEEEEECccccccCcEEeCCccCcCc
Confidence 58999999999998776542 3678899987653
No 25
>3vts_A Cytotoxin 1; three finger toxin, venom toxin; 2.43A {Hemachatus haemachatus}
Probab=94.86 E-value=0.023 Score=39.44 Aligned_cols=32 Identities=31% Similarity=0.585 Sum_probs=28.3
Q ss_pred cccCCCCCCceEEEEEecCcceeEeechhhhh
Q psy5004 43 SISCPEEDDICVKIIERKGAEEIITRDCLSTV 74 (173)
Q Consensus 43 ~etCp~~~d~CvKVier~g~~~~itRdClS~~ 74 (173)
.+|||+.+++|.|..........|+|+|..+.
T Consensus 12 ~~tCp~GqnlCykk~~~~~~g~~i~rGCaatC 43 (61)
T 3vts_A 12 SKTCPEGKNLCYKMTLMKMPKIPIKRGCTDAC 43 (61)
T ss_dssp EEECCTTCCEEEEEEETTEEEEEEEEEEESSC
T ss_pred ceeCCCCCceEEeEEEecCCCCeEEeceeCcC
Confidence 59999999999999988777788999998765
No 26
>2h7z_A Irditoxin subunit A; three-finger toxin, neurotoxin, snake venom; 1.50A {Boiga irregularis} SCOP: g.7.1.1
Probab=93.14 E-value=0.082 Score=37.19 Aligned_cols=46 Identities=22% Similarity=0.582 Sum_probs=34.4
Q ss_pred eeeecccCCCC-CCCCCCCCCccccccCCCCCCceEEEEEecC-ccee-Eeechhhhhh
Q psy5004 20 LLCYQCVSTQP-GCGTPFKWLWYPSISCPEEDDICVKIIERKG-AEEI-ITRDCLSTVK 75 (173)
Q Consensus 20 L~CY~C~S~~P-gC~dpfn~~~~~~etCp~~~d~CvKVier~g-~~~~-itRdClS~~~ 75 (173)
-.||+|+.... .|.. .++| .+++|.|.....+ ...+ |+|+|.++..
T Consensus 8 ~~C~~C~~~~s~~~~~--------~~tC--ge~~Cyk~~~~~~~~g~~~i~rGCaatCP 56 (75)
T 2h7z_A 8 TLCFECNRMTSSDCST--------ALRC--YRGSCYTLYRPDENCELKWAVKGCAETCP 56 (75)
T ss_dssp EEEECEETTTCCCTTC--------EEEE--CSSEEEEEEEECTTSCEEEEEEEEESSCC
T ss_pred CcccCCCCcccCCCCc--------cCCc--CCCEeEeEEEeCCCCCceeEeCCccCcCc
Confidence 48999988754 3443 4899 9999999887663 3455 8999998663
No 27
>2h62_C Bone morphogenetic protein receptor type IA; TGF-beta superfamily, ligand-receptor complex, hormone/growth factor complex; 1.85A {Homo sapiens} SCOP: g.7.1.3 PDB: 2h64_B 3nh7_A 1rew_C 3qb4_B 2goo_B* 2qj9_D 2qja_C 2qjb_C 2k3g_A 1es7_B
Probab=92.95 E-value=0.077 Score=40.66 Aligned_cols=45 Identities=27% Similarity=0.645 Sum_probs=32.4
Q ss_pred CceeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecC-cceeEeechhh
Q psy5004 18 SALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKG-AEEIITRDCLS 72 (173)
Q Consensus 18 eAL~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g-~~~~itRdClS 72 (173)
.+|+|| |.. .|.++.. ..||-. +-.|.+.+++.. +.+.++|+|++
T Consensus 34 ~~l~C~-C~~---~C~~~~~-----n~tC~t-~g~Cf~sv~~~~~G~~~~~~GCl~ 79 (129)
T 2h62_C 34 PFLKCY-CSG---HCPDDAI-----NNTCIT-NGHCFAIIEEDDQGETTLASGCMK 79 (129)
T ss_dssp CCEEEE-CBB---SCCTTCB-----TTEEEE-SSEEEEEEEECSSSCEEEEEEEEC
T ss_pred ccEEEE-eCC---CcCCCcc-----Ccceec-CCeEeEEEEEcCCCCEEEEeCCcC
Confidence 379999 953 3765311 258843 689988887554 78899999998
No 28
>3plc_A Beta-cardiotoxin OH-27; beta-sheet, novel cardiotoxin; 2.41A {Ophiophagus hannah} SCOP: g.7.1.1
Probab=92.69 E-value=0.056 Score=36.25 Aligned_cols=33 Identities=27% Similarity=0.524 Sum_probs=22.4
Q ss_pred cccCCCCCCceEEEEEecCcc-eeEeechhhhhh
Q psy5004 43 SISCPEEDDICVKIIERKGAE-EIITRDCLSTVK 75 (173)
Q Consensus 43 ~etCp~~~d~CvKVier~g~~-~~itRdClS~~~ 75 (173)
.++||+.+++|.|...+.+.. ..|+|+|.++..
T Consensus 12 ~~tC~~g~~~Cyk~~~~~~~~~~~i~rGCa~tCp 45 (63)
T 3plc_A 12 YTTCPIGQDKCVKMTIKKLPSKYDVIRGCIDICP 45 (63)
T ss_dssp EEECCTTCCEEEEEC--------CCEEEEESSCC
T ss_pred eeECCCCcCeEeEEEEecCCCCEEEeCCccCcCC
Confidence 589999999999998876543 358899987653
No 29
>1ug4_A Cytotoxin 6, cardiotoxin VI; cobra, venom; 1.60A {Naja atra} PDB: 1h0j_A* 1i02_A 1xt3_A* 2bhi_A* 2crs_A 2crt_A 1cxn_A 1cxo_A 1tgx_A 1cb9_A 1ccq_A 1ffj_A 1chv_S 2ccx_A 1cre_A 1crf_A 1kbs_A 1kbt_A 1rl5_A 1zad_A ...
Probab=91.65 E-value=0.12 Score=34.51 Aligned_cols=33 Identities=15% Similarity=0.470 Sum_probs=26.6
Q ss_pred cccCCCCCCceEEEEEecCcceeEeechhhhhh
Q psy5004 43 SISCPEEDDICVKIIERKGAEEIITRDCLSTVK 75 (173)
Q Consensus 43 ~etCp~~~d~CvKVier~g~~~~itRdClS~~~ 75 (173)
.++||+.+++|.|..........|.|+|.++..
T Consensus 11 ~~tC~~g~~~Cyk~~~~~~~g~~i~rGCa~tCP 43 (60)
T 1ug4_A 11 YKTCAAGKNLCYKMFMVAAPKVPVKRGCIDVCP 43 (60)
T ss_dssp EEECCTTCCEEEEEEETTEEEEEEEEEEESSCC
T ss_pred CEEcCCCcCeEeeeEEecCCCCEEECCccCcCc
Confidence 589999999999987655434789999988663
No 30
>1ntx_A Alpha-neurotoxin; NMR {Dendroaspis polylepis polylepis} SCOP: g.7.1.1
Probab=90.59 E-value=0.39 Score=32.32 Aligned_cols=40 Identities=38% Similarity=0.609 Sum_probs=29.8
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCL 71 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdCl 71 (173)
|.||.+.|..| .. +++| .+++|-|..........|.|+|.
T Consensus 1 l~C~~~~~~~~--~~--------~~tC--g~~~Cyk~~~~~~~g~~i~rGCa 40 (60)
T 1ntx_A 1 RICYNHQSTTR--AT--------TKSC--EENSCYKKYWRDHRGTIIERGCG 40 (60)
T ss_dssp CEEECCCTTSC--CC--------EEEC--SCSCEEEEEEECSSSEEEEEEES
T ss_pred CEeeCCCCCCC--Cc--------cCCC--CCcEeEeeEEcCCCCCEEeeECc
Confidence 57888876653 22 5899 99999998776543477889996
No 31
>3evs_C Bone morphogenetic protein receptor type-1B; ligand-receptor complex, cystin-knot ligand, three-finger to (receptor); 2.10A {Mus musculus}
Probab=90.18 E-value=0.25 Score=37.32 Aligned_cols=48 Identities=27% Similarity=0.598 Sum_probs=31.9
Q ss_pred hccCceeeecccCCCCCCCCC-CCCCccccccCCCCCCceEEEEEe-cCcceeEeechhhh
Q psy5004 15 SRCSALLCYQCVSTQPGCGTP-FKWLWYPSISCPEEDDICVKIIER-KGAEEIITRDCLST 73 (173)
Q Consensus 15 ~~geAL~CY~C~S~~PgC~dp-fn~~~~~~etCp~~~d~CvKVier-~g~~~~itRdClS~ 73 (173)
....+|+|| |.. .|.++ +| .||- .+..|.+.++. ..+++.++|+|++.
T Consensus 18 ~~~~~L~C~-C~~---~C~~~~~n------~tC~-t~g~Cf~sv~~~~~G~~~~~~GCl~~ 67 (119)
T 3evs_C 18 PRPKILRCK-CHH---HCPEDSVN------NICS-TDGYCFTMIEEDDSGMPVVTSGCLGL 67 (119)
T ss_dssp ----CEEEE-CSS---SCCTTSCT------TEEE-ESSEEEEEEEECTTCSEEEEEEEECS
T ss_pred ccCCCEEee-eCC---CcCCCCcC------Ceec-cCCEEEEEEEEcCCCcEEEEEcCCcc
Confidence 345779999 943 48764 22 4783 36899887765 45678889999983
No 32
>1tfs_A Toxin FS2; NMR {Dendroaspis polylepis polylepis} SCOP: g.7.1.1
Probab=88.71 E-value=0.39 Score=32.23 Aligned_cols=39 Identities=28% Similarity=0.655 Sum_probs=28.7
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeech
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDC 70 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdC 70 (173)
|.||.+.|..| .. .++| .+++|-|..........|.|+|
T Consensus 1 l~C~~~~~~~~--~~--------~~tC--g~~~Cyk~~~~~~~g~~i~rGC 39 (60)
T 1tfs_A 1 RICYSHKASLP--RA--------TKTC--VENTCYKMFIRTHREYISERGC 39 (60)
T ss_dssp CEEECCSSSSS--CC--------EEEC--SCSEEEEEEETTEEEEEEEEEE
T ss_pred CEeeCCCCCCC--Cc--------cCCc--CCcEeeeeEEcCCCCCEEeeec
Confidence 57888876653 22 5899 9999999876543237789999
No 33
>1fas_A Fasciculin 1; toxin; 1.80A {Dendroaspis angusticeps} SCOP: g.7.1.1 PDB: 1fsc_A 1f8u_B* 1b41_B 1fss_B* 1ku6_B* 1mah_F* 2x8b_B* 1qm7_A
Probab=88.37 E-value=0.57 Score=31.73 Aligned_cols=39 Identities=21% Similarity=0.589 Sum_probs=29.2
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeech
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDC 70 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdC 70 (173)
|.||.+.|..| .. +++| .+++|-|..........|.|+|
T Consensus 1 l~C~~~~~~~~--~~--------~~tC--G~~~Cyk~~~~~~~g~~i~RGC 39 (61)
T 1fas_A 1 TMCYSHTTTSR--AI--------LTNC--GENSCYRKSRRHPPKMVLGRGC 39 (61)
T ss_dssp CEEECSSSSCS--SC--------EEEC--TTSCEEEEEESSSSCCEEEEEE
T ss_pred CEeeCCCCCCC--Cc--------cCCC--CCcCCeeeEEcCCCCCEEeeeC
Confidence 57888876653 22 5899 9999999877654347889999
No 34
>1ywh_A Urokinase plasminogen activator surface receptor; UPAR, three-finger fold, protein-peptide complex, hydrolase; HET: ALC NAG FUC NDG BMA MAN; 2.70A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3
Probab=88.36 E-value=0.2 Score=43.76 Aligned_cols=51 Identities=20% Similarity=0.492 Sum_probs=38.7
Q ss_pred CceeeecccCCCC-CCCCCCCCCccccccCCCCCCceEEEEEec--CcceeEeechhh
Q psy5004 18 SALLCYQCVSTQP-GCGTPFKWLWYPSISCPEEDDICVKIIERK--GAEEIITRDCLS 72 (173)
Q Consensus 18 eAL~CY~C~S~~P-gC~dpfn~~~~~~etCp~~~d~CvKVier~--g~~~~itRdClS 72 (173)
.+|+||.|.+... .|...- .....|.++++.|+.++... +....+.|+|.+
T Consensus 190 NGL~CysC~~~~s~~Cs~e~----~~~v~CtG~En~Clt~~g~~g~~~~~~~~KGCas 243 (313)
T 1ywh_A 190 NGRQCYSCKGQSTHGCSSEE----TFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCAT 243 (313)
T ss_dssp EEEEEEEEEEBTTTBSSGGG----CEEEEEETTCCEEEEEEECCSSSSCCEEEEEEEC
T ss_pred CCCCCCCcccCCCCCCCCCC----ccceecCCCCCcceeeEeeeccCCceEEeccCCC
Confidence 6899999998765 487431 00379999999999998864 334567899997
No 35
>4aea_A Long neurotoxin 1; three-finger toxin, nicotinic acetylcholine receptor; 1.94A {Naja kaouthia} SCOP: g.7.1.1 PDB: 1lxg_A 1lxh_A 1yi5_F 1ctx_A 2ctx_A 1txa_A 1txb_A
Probab=87.96 E-value=0.39 Score=33.28 Aligned_cols=31 Identities=19% Similarity=0.409 Sum_probs=24.1
Q ss_pred cccCCCCCCceEEEEEecC----cceeEeechhhhh
Q psy5004 43 SISCPEEDDICVKIIERKG----AEEIITRDCLSTV 74 (173)
Q Consensus 43 ~etCp~~~d~CvKVier~g----~~~~itRdClS~~ 74 (173)
.++||+. ++|.|.....+ ....|+|+|.++.
T Consensus 11 ~~tC~~g-~~Cyk~~~~~~~~~~~g~~i~rGCaatC 45 (71)
T 4aea_A 11 SKDCPNG-HVCYTKTWCDAFCSIRGKRVDLGCAATC 45 (71)
T ss_dssp CBCCTTC-CEEEEEEECCTTHHHHCCEEEEEEESSC
T ss_pred eeECCCC-CeEeEEEEecccccCCCcEEeCcccCcC
Confidence 5899999 99999877653 2356789998755
No 36
>3laq_U UPAR, U-PAR, urokinase plasminogen activator surface receptor; ATF, supar, smupar, MATF, disulfide bond, EGF-LIK hydrolase, kringle; HET: NAG; 3.20A {Mus musculus}
Probab=87.22 E-value=0.35 Score=41.32 Aligned_cols=52 Identities=21% Similarity=0.537 Sum_probs=36.5
Q ss_pred cCceeeecccCCCC-CCCCCCCCCccccccCCCCCCceEEEE--EecCcceeEeechhh
Q psy5004 17 CSALLCYQCVSTQP-GCGTPFKWLWYPSISCPEEDDICVKII--ERKGAEEIITRDCLS 72 (173)
Q Consensus 17 geAL~CY~C~S~~P-gC~dpfn~~~~~~etCp~~~d~CvKVi--er~g~~~~itRdClS 72 (173)
...|+||.|.+..+ .|...- .....|+++++.|+..+ ...+....+.|+|.+
T Consensus 187 pNGl~C~sC~~~~~~~C~~~~----~~~~~C~G~et~C~~~~g~~~~g~~~~~~kGCat 241 (277)
T 3laq_U 187 PNGFQCYSCEGNNTLGCSSEE----ASLINCRGPMNQCLVATGLDVLGNRSYTVRGCAT 241 (277)
T ss_dssp CCSCEEEEBCSSSSSSSSSSS----CEEEECCTTCCEEEEECCC-----CCCCEEEEEC
T ss_pred CcccCCCCcccCCCCCCCCCC----CcceEcCCCCCcceEEEeEEecCceeEEecCCCC
Confidence 46899999999866 698641 01379999999998765 223455677899996
No 37
>4fao_C Serine/threonine-protein kinase receptor R3; TGF-beta, CTK, cystine knot, extracellular domain, signaling protein-signaling protein complex; HET: NAG; 3.36A {Homo sapiens} PDB: 2lcr_A
Probab=79.22 E-value=1.4 Score=32.72 Aligned_cols=44 Identities=25% Similarity=0.551 Sum_probs=29.3
Q ss_pred ccCceeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCc-ceeEeechhhh
Q psy5004 16 RCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGA-EEIITRDCLST 73 (173)
Q Consensus 16 ~geAL~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~-~~~itRdClS~ 73 (173)
....|+|| |.. +.|.+ .||. ...|.+.+++..+ .+.++|+|++.
T Consensus 9 ~~~~l~C~-Ce~--~~C~n---------~tC~--~g~Cf~sv~~~~g~~~~~~~GCl~~ 53 (106)
T 4fao_C 9 RGPLVTCT-CES--PHCKG---------PTCR--GAWCTVVLVREEGRHPQEHRGCGNL 53 (106)
T ss_dssp --CCEEEE-CBS--TTCSS---------SEEE--ESSEEEEEECCTTSCCEEEEECCCS
T ss_pred CCCCeEEE-cCC--CCCCC---------Ceee--CCEeEEEEEEcCCceEEEEeCCCCC
Confidence 35789997 854 35842 3793 7889776655544 45588999884
No 38
>2fd6_U Urokinase plasminogen activator surface receptor; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3 PDB: 3bt2_U* 3bt1_U* 2i9b_E* 3u74_U* 3u73_U*
Probab=78.81 E-value=1.3 Score=37.79 Aligned_cols=51 Identities=20% Similarity=0.511 Sum_probs=38.7
Q ss_pred CceeeecccCCCC-CCCCCCCCCccccccCCCCCCceEEEEEecCcc--eeEeechhh
Q psy5004 18 SALLCYQCVSTQP-GCGTPFKWLWYPSISCPEEDDICVKIIERKGAE--EIITRDCLS 72 (173)
Q Consensus 18 eAL~CY~C~S~~P-gC~dpfn~~~~~~etCp~~~d~CvKVier~g~~--~~itRdClS 72 (173)
..++||.|.+..+ .|..+-. -...|.++++.|+.++-..+.. ..+.|+|.+
T Consensus 191 NG~~CpaC~~~~s~~Cs~~~t----~~v~CtG~En~Cv~~~g~~g~~~~s~~vkGCaT 244 (276)
T 2fd6_U 191 NGRQCYSCKGNSTHGCSSEET----FLIDCRGPMNQCLVATGTHEPKNQSYMVRGCAT 244 (276)
T ss_dssp EEEEEEEEEEBTTTBSSTTTC----EEEEEETTCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred CCCCCcccccCCCCCCCCCCc----ccceeecCcccceeeeeeeccCCceEEEecCCC
Confidence 5699999999866 5986520 0268999999999998766433 456799997
No 39
>1drs_A Dendroaspin; cell adhesion protein; NMR {Dendroaspis jamesoni kaimosae} SCOP: g.7.1.2 PDB: 2la1_A
Probab=77.26 E-value=1.1 Score=30.24 Aligned_cols=37 Identities=38% Similarity=0.777 Sum_probs=26.6
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeech
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDC 70 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdC 70 (173)
|.||.+.|.+| .. ++|| .+++|-|... .. ...|.|+|
T Consensus 1 l~C~~~~~~~~--~~--------~~tC--G~~~Cyk~~~-~~-g~~i~RGC 37 (59)
T 1drs_A 1 RICYNHLGTKP--PT--------TETC--QEDSCYKNIW-TF-DNIIRRGC 37 (59)
T ss_dssp CEEECCCTTCC--CC--------EEEC--CCSCEEECCC-TT-TTCCCCEE
T ss_pred CEeeCCCCCCC--Cc--------cCCC--CCcEeEeEEe-cC-CCEEeeec
Confidence 57888876653 22 5899 9999998765 22 36688999
Done!