Query psy5004
Match_columns 173
No_of_seqs 55 out of 57
Neff 3.3
Searched_HMMs 13730
Date Fri Aug 16 23:23:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5004.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/5004hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ff4a_ g.7.1.1 (A:) Muscarini 94.7 0.011 7.8E-07 39.9 3.1 45 20-74 1-46 (65)
2 d1mr6a_ g.7.1.1 (A:) Bungaroto 94.5 0.013 9.2E-07 39.8 3.1 45 20-74 1-49 (68)
3 d2j8ba1 g.7.1.3 (A:1-77) CD59 93.0 0.05 3.6E-06 37.7 4.1 59 20-90 1-65 (77)
4 d1kxia_ g.7.1.1 (A:) Cardiotox 92.9 0.04 2.9E-06 36.8 3.4 32 43-74 12-44 (62)
5 d1jgka_ g.7.1.1 (A:) Candoxin 91.6 0.095 6.9E-06 35.3 4.0 47 20-74 1-47 (66)
6 d2h62c1 g.7.1.3 (C:34-117) BMP 90.0 0.13 9.2E-06 34.8 3.5 44 19-72 2-46 (84)
7 d2h8ua1 g.7.1.1 (A:1-65) Bucai 89.7 0.075 5.5E-06 35.6 2.1 44 21-74 2-46 (65)
8 d1tgxa_ g.7.1.1 (A:) gamma-Car 89.5 0.075 5.5E-06 35.1 1.9 32 43-74 11-42 (60)
9 d2fd6u3 g.7.1.3 (U:92-188) Uro 88.8 0.16 1.1E-05 36.3 3.4 49 20-72 2-58 (97)
10 d1hc9a_ g.7.1.1 (A:) Bungaroto 86.5 0.25 1.8E-05 33.7 3.1 32 43-74 13-48 (74)
11 d1ntna_ g.7.1.1 (A:) Neurotoxi 86.0 0.23 1.7E-05 33.8 2.7 32 43-74 11-46 (72)
12 d2fd6u2 g.7.1.3 (U:189-275) Ur 83.4 0.42 3E-05 33.6 3.2 51 19-73 3-56 (87)
13 d1v6pa_ g.7.1.1 (A:) Cobrotoxi 83.3 1.1 7.8E-05 29.6 5.1 29 43-71 14-42 (62)
14 d3ebxa_ g.7.1.1 (A:) Erabutoxi 75.9 1.8 0.00013 28.5 4.2 29 43-71 14-42 (62)
15 d2fd6u1 g.7.1.3 (U:1-80) Uroki 70.9 1.5 0.00011 30.2 3.0 46 20-75 1-50 (80)
16 d1lsia_ g.7.1.1 (A:) Long neur 62.2 2 0.00015 28.4 2.2 32 43-74 10-45 (66)
17 d1ntxa_ g.7.1.1 (A:) alpha-Tox 36.1 23 0.0017 22.7 4.1 27 43-71 14-40 (60)
18 d1kbaa_ g.7.1.1 (A:) Bungaroto 34.7 13 0.00095 24.4 2.7 32 43-74 11-46 (66)
19 d1tfsa_ g.7.1.1 (A:) FS2 toxin 31.5 23 0.0017 22.8 3.5 27 43-71 14-40 (60)
20 d1fasa_ g.7.1.1 (A:) Fasciculi 27.0 44 0.0032 21.4 4.3 27 43-71 14-40 (61)
21 d2exfa1 g.40.1.1 (A:12-53) HIV 21.5 31 0.0022 19.8 2.5 9 20-28 2-10 (42)
22 d1m9za_ g.7.1.3 (A:) TGF-beta 21.5 44 0.0032 23.5 3.7 38 43-89 26-63 (105)
23 d1ks6a_ g.7.1.3 (A:) TGF-beta 20.1 52 0.0038 23.1 3.9 38 43-89 29-66 (107)
No 1
>d1ff4a_ g.7.1.1 (A:) Muscarinic toxin {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]}
Probab=94.70 E-value=0.011 Score=39.87 Aligned_cols=45 Identities=24% Similarity=0.403 Sum_probs=34.1
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEe-cCcceeEeechhhhh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIER-KGAEEIITRDCLSTV 74 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier-~g~~~~itRdClS~~ 74 (173)
|.|+.|.|.+ |.. ++|||+.+++|.|.... .+.-..|+|+|.-+.
T Consensus 1 ltC~~~~s~~--~~t--------~~tCp~GqnlCykk~~~~~~~g~~i~rGCaaTC 46 (65)
T d1ff4a_ 1 LTCVTTKSIG--GVT--------TEDCPAGQNVCFKRWHYVTPKNYDIIKGCAATC 46 (65)
T ss_dssp CEEEEECTTS--SEE--------EEECCTTCCEEEEEEEESSSSCEEEEEEEESSC
T ss_pred CeeecCCCcc--CCc--------cccCCCccceeeEEEEecCCCCCEEEeeeeCcC
Confidence 5688888876 333 49999999999998744 445566999998654
No 2
>d1mr6a_ g.7.1.1 (A:) Bungarotoxin {Many-banded krait (Bungarus multicinctus), gamma-bungarotoxin [TaxId: 8616]}
Probab=94.46 E-value=0.013 Score=39.80 Aligned_cols=45 Identities=29% Similarity=0.620 Sum_probs=33.3
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecC----cceeEeechhhhh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKG----AEEIITRDCLSTV 74 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g----~~~~itRdClS~~ 74 (173)
|.|+.|.+.. |..+ +|||+.+++|.|..-... -...|+|+|..+.
T Consensus 1 l~C~tC~~~~--c~~~--------etCp~GqnlCykk~w~~~~~~~~g~~i~rGCaaTC 49 (68)
T d1mr6a_ 1 MQCKTCSFYT--CPNS--------ETCPDGKNICVKRSWTAVRGDGPKREIRRECAATC 49 (68)
T ss_dssp CBCCCCSSSC--CCSC--------CBCCTTCCCEEEECCBCCSSSCCSBCCEEEECSSS
T ss_pred CceEeCCCcc--CCCc--------ccCCCCCCeEEeEEeeccccccCCCcEecceeCcC
Confidence 6799998776 5553 899999999998864322 2346789998765
No 3
>d2j8ba1 g.7.1.3 (A:1-77) CD59 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.99 E-value=0.05 Score=37.72 Aligned_cols=59 Identities=24% Similarity=0.562 Sum_probs=40.5
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechhh------hhhhhhhcCCcccccccc
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLS------TVKAFRTDIPADRYEGCR 90 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdClS------~~~~~r~dipad~yegcr 90 (173)
|+||+|.-.+.+|... ++|+.+.|.|-.+ + +|++.. |+|.. +..+-+-.++.-+|.=|.
T Consensus 1 L~CY~C~d~t~~C~t~--------~~C~~~~DaCL~~-~-~g~~~y--~qCwk~sDC~~~~is~~f~~~~f~y~CC~ 65 (77)
T d2j8ba1 1 LQCYNCPNPTADCKTA--------VNCSSDFDACLIT-K-AGLQVY--NKCWKFEHCNFNDVTTRLRENELTYYCCK 65 (77)
T ss_dssp CEEECCSSCCTTCCCE--------EECCTTCCEEEEE-E-ETTEEE--EEEECGGGCSHHHHHHHHTCSSCEEEEEC
T ss_pred CcccccCCCCCccccc--------cccCCCCCeeEEE-e-eCCeEE--eeeEeccCCCHHHHHHHhcccCceeeccC
Confidence 7899997556689986 7999999999855 3 466544 67643 222334467777776554
No 4
>d1kxia_ g.7.1.1 (A:) Cardiotoxin V {Taiwan cobra (Naja naja atra) [TaxId: 8656]}
Probab=92.94 E-value=0.04 Score=36.77 Aligned_cols=32 Identities=25% Similarity=0.527 Sum_probs=26.0
Q ss_pred cccCCCCCCceEEEEEecCc-ceeEeechhhhh
Q psy5004 43 SISCPEEDDICVKIIERKGA-EEIITRDCLSTV 74 (173)
Q Consensus 43 ~etCp~~~d~CvKVier~g~-~~~itRdClS~~ 74 (173)
.+|||+.+++|.|....... ...|.|+|.-+.
T Consensus 12 ~~tCp~GqnlCyK~~~~~~~~~~~v~RGCaatC 44 (62)
T d1kxia_ 12 YKTCPEGKNLCFKATLKKFPLKFPVKRGCADNC 44 (62)
T ss_dssp EEECCTTCCEEEEEEESSSCCCSCSEEEEESSC
T ss_pred cccCCCCcceEEEEeeccCcCCceeeeeeeccC
Confidence 48999999999999887543 577789998654
No 5
>d1jgka_ g.7.1.1 (A:) Candoxin {Malayan krait (Bungarus candidus) [TaxId: 92438]}
Probab=91.56 E-value=0.095 Score=35.30 Aligned_cols=47 Identities=23% Similarity=0.426 Sum_probs=35.4
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEecCcceeEeechhhhh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERKGAEEIITRDCLSTV 74 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~g~~~~itRdClS~~ 74 (173)
|.|-.|+-.. |.+.- .+|||..+++|.|-....+--.+|+|+|.-+.
T Consensus 1 l~C~~C~~~t--~~~~~------~~tCp~Ge~~Cykk~w~d~rG~rierGCaATC 47 (66)
T d1jgka_ 1 MKCKICNFDT--CRAGE------LKVCASGEKYCFKESWREARGTRIERGCAATC 47 (66)
T ss_dssp CEEEECCTTS--CSCCE------EEECCSSSCEEEEEEECCSSCCEEECCEESCC
T ss_pred CeeEeCCCcc--CCCCc------cccCCCCCCeEeeeEeecCCCCEEEccEeccC
Confidence 4677775554 33221 58999999999988888777788999998765
No 6
>d2h62c1 g.7.1.3 (C:34-117) BMP receptor Ia ectodomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.00 E-value=0.13 Score=34.80 Aligned_cols=44 Identities=27% Similarity=0.622 Sum_probs=31.7
Q ss_pred ceeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEec-CcceeEeechhh
Q psy5004 19 ALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERK-GAEEIITRDCLS 72 (173)
Q Consensus 19 AL~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~-g~~~~itRdClS 72 (173)
-|+|| |...-|.+..+ .||- .+..|.+.+++. .+.+.++++||+
T Consensus 2 ~L~C~-C~~~C~~~~~N--------~TC~-t~g~Cf~s~~~~~~g~~~~~~GCl~ 46 (84)
T d2h62c1 2 FLKCY-CSGHCPDDAIN--------NTCI-TNGHCFAIIEEDDQGETTLASGCMK 46 (84)
T ss_dssp CEEEE-CBBSCCTTCBT--------TEEE-ESSEEEEEEEECSSSCEEEEEEEEC
T ss_pred CeEEE-eCCCCCCCCcC--------CeEe-CCCEEeEEEEEcCCCcEEEEEcCCC
Confidence 48999 95444444444 3783 478899888775 567889999986
No 7
>d2h8ua1 g.7.1.1 (A:1-65) Bucain {Malaysian krait (Bungarus candidus) [TaxId: 92438]}
Probab=89.73 E-value=0.075 Score=35.60 Aligned_cols=44 Identities=25% Similarity=0.449 Sum_probs=32.1
Q ss_pred eeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEec-CcceeEeechhhhh
Q psy5004 21 LCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERK-GAEEIITRDCLSTV 74 (173)
Q Consensus 21 ~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~-g~~~~itRdClS~~ 74 (173)
+|+.|.|.. +.. ++|||+.+++|.|.-... ..-..|+|+|.-+.
T Consensus 2 ~C~~~~s~~--~~t--------s~tCp~GqnlCyK~~~~~~~~g~~v~rGCaaTC 46 (65)
T d2h8ua1 2 KCLIKYSQA--NES--------SKTCPSGQLLCLKKWEIGNPSGKEVKRGCVATC 46 (65)
T ss_dssp EEEEEECSS--CEE--------EEECCTTCCEEEEEEESSCTTCCCCEEEEESSC
T ss_pred cceeCCCcC--CCc--------ceeCCCCcceeEEEEecCCCCCceEeeeeeCcC
Confidence 577777766 222 599999999999987643 34567789998654
No 8
>d1tgxa_ g.7.1.1 (A:) gamma-Cardiotoxin {Snake (Naja nigricollis) [TaxId: 8654]}
Probab=89.53 E-value=0.075 Score=35.11 Aligned_cols=32 Identities=22% Similarity=0.584 Sum_probs=27.2
Q ss_pred cccCCCCCCceEEEEEecCcceeEeechhhhh
Q psy5004 43 SISCPEEDDICVKIIERKGAEEIITRDCLSTV 74 (173)
Q Consensus 43 ~etCp~~~d~CvKVier~g~~~~itRdClS~~ 74 (173)
.+|||+.+++|.|..........|.|+|.-+.
T Consensus 11 ~~tCp~GqnlCykk~~~~~~g~~v~rGCaatC 42 (60)
T d1tgxa_ 11 WKTCPKGKNLCYKMTMRAAPMVPVKRGCIDVC 42 (60)
T ss_dssp EEECCTTCCEEEEEEETTBTTCCSEEEEESSC
T ss_pred cccCCCCcceeeeEEeeccCCCEEecceeccC
Confidence 58999999999999988766678889998654
No 9
>d2fd6u3 g.7.1.3 (U:92-188) Urokinase plasminogen activator surface receptor, UPAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.82 E-value=0.16 Score=36.35 Aligned_cols=49 Identities=22% Similarity=0.543 Sum_probs=37.9
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEE--------EecCcceeEeechhh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKII--------ERKGAEEIITRDCLS 72 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVi--------er~g~~~~itRdClS 72 (173)
|-|-.|.|.+-.|--- ++.+-+|....+.|+.|+ |..+..++.+|+|++
T Consensus 2 LEC~SC~SsD~SCERG----r~qsLQCr~p~eqClevVTh~~q~~~e~~~~de~~~rGCg~ 58 (97)
T d2fd6u3 2 LECISCGSSDMSCERG----RHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGY 58 (97)
T ss_dssp CEEEEEETTTTTTTTT----CCEEEECSSTTCEEEEEEEEC----------CCSEEEEEEE
T ss_pred ceeecccccccchhhc----hhhccccCCchhhHhHHhhhhhhccccCCcccccccccCCC
Confidence 5688999998888776 456789999999999888 566778899999998
No 10
>d1hc9a_ g.7.1.1 (A:) Bungarotoxin {Many-banded krait (Bungarus multicinctus), Alpha-bungarotoxin [TaxId: 8616]}
Probab=86.47 E-value=0.25 Score=33.74 Aligned_cols=32 Identities=16% Similarity=0.554 Sum_probs=24.6
Q ss_pred cccCCCCCCceEEEEEecC----cceeEeechhhhh
Q psy5004 43 SISCPEEDDICVKIIERKG----AEEIITRDCLSTV 74 (173)
Q Consensus 43 ~etCp~~~d~CvKVier~g----~~~~itRdClS~~ 74 (173)
.+|||+.+++|.|...... --..|+|+|.-+.
T Consensus 13 ~etCp~GqnlCykk~w~d~~~~~rG~~i~rGCaATC 48 (74)
T d1hc9a_ 13 AVTCPPGENLCYRKMWCDVFCSSRGKVVELGCAATC 48 (74)
T ss_dssp EEECCTTCCEEEEEEECCTTHHHHCCEEEEEEESSC
T ss_pred cccCCCCcCeEEEEEeeccccCCCCCEEEcceeCcC
Confidence 5999999999998876542 2456789998654
No 11
>d1ntna_ g.7.1.1 (A:) Neurotoxin I {Snake (Naja naja oxiana) [TaxId: 8657]}
Probab=86.04 E-value=0.23 Score=33.78 Aligned_cols=32 Identities=19% Similarity=0.399 Sum_probs=23.1
Q ss_pred cccCCCCCCceEEEEEec----CcceeEeechhhhh
Q psy5004 43 SISCPEEDDICVKIIERK----GAEEIITRDCLSTV 74 (173)
Q Consensus 43 ~etCp~~~d~CvKVier~----g~~~~itRdClS~~ 74 (173)
++|||+.+++|.+-.... .--..|+|+|.-+.
T Consensus 11 setCp~GqnlCy~K~W~d~~~~~rG~~i~rGCaATC 46 (72)
T d1ntna_ 11 SETCAPGQNLCYTKTWCDAWCGSRGKVIELGCAATC 46 (72)
T ss_dssp EEECCTTCCEEEEEEECCTTHHHHCCEEEEEEESSC
T ss_pred cccCCCCCceEEEEEeeccccCcCCCeEEcceECcC
Confidence 599999999998665432 12356789998655
No 12
>d2fd6u2 g.7.1.3 (U:189-275) Urokinase plasminogen activator surface receptor, UPAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.42 E-value=0.42 Score=33.59 Aligned_cols=51 Identities=20% Similarity=0.498 Sum_probs=37.6
Q ss_pred ceeeeccc-CCCCCCCCCCCCCccccccCCCCCCceEEE--EEecCcceeEeechhhh
Q psy5004 19 ALLCYQCV-STQPGCGTPFKWLWYPSISCPEEDDICVKI--IERKGAEEIITRDCLST 73 (173)
Q Consensus 19 AL~CY~C~-S~~PgC~dpfn~~~~~~etCp~~~d~CvKV--ier~g~~~~itRdClS~ 73 (173)
.|.||.|. +.+-+|.... +-+..|..+.+.|+.. ++..+..+..+|+|.+.
T Consensus 3 ~leC~SC~gss~~~Cs~~~----~~~l~Cr~p~~QClea~g~~~~~~~s~~vRGCat~ 56 (87)
T d2fd6u2 3 GRQCYSCKGNSTHGCSSEE----TFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATA 56 (87)
T ss_dssp EEEEEEEEEBTTTBSSTTT----CEEEEEETTCCEEEEEEEEETTTTEEEEEEEEECG
T ss_pred CceeeecCCCCCccccccc----ceeeecCCchhhheeccCcccCCCccceecccccC
Confidence 58999995 4455788663 4478999999999543 45556677788999883
No 13
>d1v6pa_ g.7.1.1 (A:) Cobrotoxin II (ct2) {Taiwan cobra (Naja naja atra) [TaxId: 8656]}
Probab=83.29 E-value=1.1 Score=29.58 Aligned_cols=29 Identities=21% Similarity=0.287 Sum_probs=26.0
Q ss_pred cccCCCCCCceEEEEEecCcceeEeechh
Q psy5004 43 SISCPEEDDICVKIIERKGAEEIITRDCL 71 (173)
Q Consensus 43 ~etCp~~~d~CvKVier~g~~~~itRdCl 71 (173)
+++||..++.|-|-.-+..--..|+|+|.
T Consensus 14 t~~C~~Gen~CYkk~w~d~rg~~ierGCg 42 (62)
T d1v6pa_ 14 TTGCSGGETNCYKKRWRDHRGYRTERGCG 42 (62)
T ss_dssp EEECCTTCCCEEEEEEEETTEEEEEEEES
T ss_pred cccCCCCcCeeEeeEeecCCCCEeeeeec
Confidence 58999999999988888888889999996
No 14
>d3ebxa_ g.7.1.1 (A:) Erabutoxin B (also neurotoxin B) {Sea snake (Laticauda semifasciata) [TaxId: 8631]}
Probab=75.91 E-value=1.8 Score=28.49 Aligned_cols=29 Identities=21% Similarity=0.335 Sum_probs=26.2
Q ss_pred cccCCCCCCceEEEEEecCcceeEeechh
Q psy5004 43 SISCPEEDDICVKIIERKGAEEIITRDCL 71 (173)
Q Consensus 43 ~etCp~~~d~CvKVier~g~~~~itRdCl 71 (173)
+++||+.++.|-|-.-...--..|+|+|.
T Consensus 14 t~tC~~Ge~~CYkk~w~d~rg~~ierGCg 42 (62)
T d3ebxa_ 14 TKTCSPGESSCYHKQWSDFRGTIIERGCG 42 (62)
T ss_dssp EEECCTTCCCEEEEEEEETTEEEEEEEES
T ss_pred cccCCCCCCeeeeeEeccCCCCEEeeeec
Confidence 68999999999998888888889999995
No 15
>d2fd6u1 g.7.1.3 (U:1-80) Urokinase plasminogen activator surface receptor, UPAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.90 E-value=1.5 Score=30.18 Aligned_cols=46 Identities=28% Similarity=0.616 Sum_probs=34.5
Q ss_pred eeeecccCCCCCCCCCCCCCccccccCCCCCCceEEEEEec----CcceeEeechhhhhh
Q psy5004 20 LLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERK----GAEEIITRDCLSTVK 75 (173)
Q Consensus 20 L~CY~C~S~~PgC~dpfn~~~~~~etCp~~~d~CvKVier~----g~~~~itRdClS~~~ 75 (173)
|+|-+|.+.+. |. ++.|+-.+|.|+..+.+. ...+.++|+|.-+=+
T Consensus 1 LrCmqCe~~~~-C~---------VeeCalgQdLCRTTv~r~We~g~Elevv~rgCth~eK 50 (80)
T d2fd6u1 1 LRCMQCKTNGD-CR---------VEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEK 50 (80)
T ss_dssp CEEEEECTTSC-EE---------EEECCTTCCEEEEEEEEEECC---EEEEEEEEECTTC
T ss_pred CcceeccCCCc-ee---------EEeccCccchhhHhhhhhhcCCceEEEEEcccccccc
Confidence 68999988763 42 689999999998887764 345789999976544
No 16
>d1lsia_ g.7.1.1 (A:) Long neurotoxin 1 (component LSIII) {Sea snake (Laticauda semifasciata) [TaxId: 8631]}
Probab=62.17 E-value=2 Score=28.44 Aligned_cols=32 Identities=19% Similarity=0.450 Sum_probs=23.1
Q ss_pred cccCCCCCCceEEEEEec----CcceeEeechhhhh
Q psy5004 43 SISCPEEDDICVKIIERK----GAEEIITRDCLSTV 74 (173)
Q Consensus 43 ~etCp~~~d~CvKVier~----g~~~~itRdClS~~ 74 (173)
++|||+.+++|.+-...- .--..|+|+|.-+.
T Consensus 10 ~etCp~GqnlCy~k~w~d~~~~~rG~~i~rGCaATC 45 (66)
T d1lsia_ 10 TQTCPSGQEICYVKSWCNAWCSSRGKVLEFGCAATC 45 (66)
T ss_dssp CCCCCSSCCEEEEEECCCTTCTTSCCCCEEEEESSC
T ss_pred CccCCCCCCeEEEEEeeccccCcCCCEEEcceECcC
Confidence 589999999998765322 23456789998654
No 17
>d1ntxa_ g.7.1.1 (A:) alpha-Toxin {Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]}
Probab=36.06 E-value=23 Score=22.73 Aligned_cols=27 Identities=33% Similarity=0.548 Sum_probs=23.4
Q ss_pred cccCCCCCCceEEEEEecCcceeEeechh
Q psy5004 43 SISCPEEDDICVKIIERKGAEEIITRDCL 71 (173)
Q Consensus 43 ~etCp~~~d~CvKVier~g~~~~itRdCl 71 (173)
+.+|+ ++.|-|-+-+-.--..|.|+|+
T Consensus 14 T~~c~--E~~CYkk~W~d~rg~~ieRGCg 40 (60)
T d1ntxa_ 14 TKSCE--ENSCYKKYWRDHRGTIIERGCG 40 (60)
T ss_dssp EEECS--CSCEEEEEEECSSSEEEEEEES
T ss_pred cccCC--CCCeEeeEEecCCCCEeeeccC
Confidence 47888 5789999999999999999996
No 18
>d1kbaa_ g.7.1.1 (A:) Bungarotoxin {Many-banded krait (Bungarus multicinctus), kappa-bungarotoxin [TaxId: 8616]}
Probab=34.67 E-value=13 Score=24.39 Aligned_cols=32 Identities=25% Similarity=0.604 Sum_probs=22.4
Q ss_pred cccCCCCCCceEEEEEecC----cceeEeechhhhh
Q psy5004 43 SISCPEEDDICVKIIERKG----AEEIITRDCLSTV 74 (173)
Q Consensus 43 ~etCp~~~d~CvKVier~g----~~~~itRdClS~~ 74 (173)
++|||..+++|.+-..--. --..|+|+|.-+.
T Consensus 11 setCp~GqniCy~K~wcd~~c~~rG~~ie~GCaATC 46 (66)
T d1kbaa_ 11 PQTCPNGQDICFLKAQCDKFCSIRGPVIEQGCVATC 46 (66)
T ss_dssp EEECCTTCCEEEEEEECCTTHHHHCCEEEEEEESSC
T ss_pred cccCCCCCCEEEEEEeeccccccCCCEEEeeeeeeC
Confidence 5999999999976654211 1346778987765
No 19
>d1tfsa_ g.7.1.1 (A:) FS2 toxin {Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]}
Probab=31.54 E-value=23 Score=22.76 Aligned_cols=27 Identities=30% Similarity=0.581 Sum_probs=23.6
Q ss_pred cccCCCCCCceEEEEEecCcceeEeechh
Q psy5004 43 SISCPEEDDICVKIIERKGAEEIITRDCL 71 (173)
Q Consensus 43 ~etCp~~~d~CvKVier~g~~~~itRdCl 71 (173)
+.+|+ ++.|-|.+-+-.--..|.|+|+
T Consensus 14 T~~C~--E~sCYkk~w~dhrg~~ieRGCG 40 (60)
T d1tfsa_ 14 TKTCV--ENTCYKMFIRTHREYISERGCG 40 (60)
T ss_dssp EEECS--CSEEEEEEETTEEEEEEEEEES
T ss_pred ceeCC--CCCeeeeEeccCCCcEeccccC
Confidence 58997 5789999999888999999995
No 20
>d1fasa_ g.7.1.1 (A:) Fasciculin {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]}
Probab=27.04 E-value=44 Score=21.37 Aligned_cols=27 Identities=19% Similarity=0.503 Sum_probs=23.2
Q ss_pred cccCCCCCCceEEEEEecCcceeEeechh
Q psy5004 43 SISCPEEDDICVKIIERKGAEEIITRDCL 71 (173)
Q Consensus 43 ~etCp~~~d~CvKVier~g~~~~itRdCl 71 (173)
+++|+ ++.|-|.+-+-.-...|.|+|+
T Consensus 14 T~tCg--E~sCYkk~w~dhrg~iieRGCG 40 (61)
T d1fasa_ 14 LTNCG--ENSCYRKSRRHPPKMVLGRGCG 40 (61)
T ss_dssp EEECT--TSCEEEEEESSSSCCEEEEEES
T ss_pred ccccC--CCCeeeeEEccCCCcEeccccC
Confidence 57894 4679999999999999999995
No 21
>d2exfa1 g.40.1.1 (A:12-53) HIV nucleocapsid {Human immunodeficiency virus type 1, different isolates [TaxId: 11676]}
Probab=21.50 E-value=31 Score=19.83 Aligned_cols=9 Identities=22% Similarity=0.933 Sum_probs=5.8
Q ss_pred eeeecccCC
Q psy5004 20 LLCYQCVST 28 (173)
Q Consensus 20 L~CY~C~S~ 28 (173)
++||+|-..
T Consensus 2 i~C~~Cg~~ 10 (42)
T d2exfa1 2 VKCFNCGKE 10 (42)
T ss_dssp CCCTTTCCS
T ss_pred CccccCCCc
Confidence 567777554
No 22
>d1m9za_ g.7.1.3 (A:) TGF-beta type II receptor extracellular domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.48 E-value=44 Score=23.48 Aligned_cols=38 Identities=16% Similarity=0.468 Sum_probs=31.9
Q ss_pred cccCCCCCCceEEEEEecCcceeEeechhhhhhhhhhcCCccccccc
Q psy5004 43 SISCPEEDDICVKIIERKGAEEIITRDCLSTVKAFRTDIPADRYEGC 89 (173)
Q Consensus 43 ~etCp~~~d~CvKVier~g~~~~itRdClS~~~~~r~dipad~yegc 89 (173)
+..|...+.+||.|-.+.+.+.++.--|-. |+..|+|=
T Consensus 26 tSiCe~p~EvCvaiWRkn~~nitleT~CHd---------P~~~l~g~ 63 (105)
T d1m9za_ 26 TSICEKPQEVCVAVWRKNDENITLETVCHD---------PKLPYHDF 63 (105)
T ss_dssp EEECSSTTCEEEEEEEECSSCEEEEEEEEC---------TTSCBTTB
T ss_pred eeeeCCchheEEEEEEEcCCCceEEEEEcC---------CCceeccc
Confidence 357888999999999999999998777765 88888874
No 23
>d1ks6a_ g.7.1.3 (A:) TGF-beta type II receptor extracellular domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=20.06 E-value=52 Score=23.14 Aligned_cols=38 Identities=18% Similarity=0.526 Sum_probs=31.7
Q ss_pred cccCCCCCCceEEEEEecCcceeEeechhhhhhhhhhcCCccccccc
Q psy5004 43 SISCPEEDDICVKIIERKGAEEIITRDCLSTVKAFRTDIPADRYEGC 89 (173)
Q Consensus 43 ~etCp~~~d~CvKVier~g~~~~itRdClS~~~~~r~dipad~yegc 89 (173)
+..|...+.+||.|-.+.+.+.++.--|-. |+..|||=
T Consensus 29 tSiCe~p~EvCVaiWRkn~~nitleT~CHd---------P~~~l~g~ 66 (107)
T d1ks6a_ 29 TSICEKNNEVCAAVWRRNDENVTLETICHD---------PQKRLYGH 66 (107)
T ss_dssp CEECCSSSCCEEEEEEEETTEEEEEEECCC---------TTSCBTTB
T ss_pred eeeeCCchHeEEEEEEEcCCCeeEEEEEcC---------CCceeccc
Confidence 357888999999999999999998777755 88888874
Done!