Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>psy5004
MKLLVLTLSLISFVSRCSALLCYQCVSTQPGCGTPFKWLWYPSISCPEEDDICVKIIERK
GAEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQRPSELKTG
YTEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQR

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy5004
        (173 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0036198 - symbol:crim "crimpled" species:7227 "Dro...   330  7.9e-30   1


>FB|FBgn0036198 [details] [associations]
            symbol:crim "crimpled" species:7227 "Drosophila melanogaster"
            [GO:0019991 "septate junction assembly" evidence=IMP] [GO:0035151
            "regulation of tube size, open tracheal system" evidence=IMP]
            EMBL:AE014296 GO:GO:0035151 GO:GO:0019991 InterPro:IPR001526
            Pfam:PF00021 EMBL:AY060768 RefSeq:NP_648500.1 UniGene:Dm.935
            EnsemblMetazoa:FBtr0076123 GeneID:39321 KEGG:dme:Dmel_CG6038
            UCSC:CG6038-RA CTD:39321 FlyBase:FBgn0036198 eggNOG:NOG84412
            InParanoid:Q9VTM6 OMA:ADKYEGC OrthoDB:EOG4Q2BXZ GenomeRNAi:39321
            NextBio:813056 Uniprot:Q9VTM6
        Length = 158

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 63/112 (56%), Positives = 77/112 (68%)

Query:     4 LVLTLSLISFVSRCSALLCYQCVSTQPGCGTPFKW--LWYPSISCPEEDDICVKIIERKG 61
             L+  L L + +   SA+ CY+C S  PGC   F W  + +    CPE DDICVK+ ER+G
Sbjct:     7 LIAALLLAALIHEGSAIWCYRCTSATPGCAEKFNWRGIGFLGEHCPEPDDICVKVTERRG 66

Query:    62 AEEIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQR 113
             A E ITRDCLS + +FR DIPAD+YEGCR AA D KLANYVNH+I E DV+R
Sbjct:    67 ARETITRDCLSAL-SFRKDIPADKYEGCRPAAHDEKLANYVNHTIKEHDVRR 117

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 36/50 (72%), Positives = 41/50 (82%)

Query:   124 EIITRDCLSTVKAFRTDIPADRYEGCRAAAKDPKLANYVNHSIPELDVQR 173
             E ITRDCLS + +FR DIPAD+YEGCR AA D KLANYVNH+I E DV+R
Sbjct:    69 ETITRDCLSAL-SFRKDIPADKYEGCRPAAHDEKLANYVNHTIKEHDVRR 117


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.424    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      173       173   0.00097  108 3  11 22  0.39    32
                                                     31  0.48    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  161 KB (2094 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.57u 0.09s 15.66t   Elapsed:  00:00:16
  Total cpu time:  15.57u 0.09s 15.66t   Elapsed:  00:00:17
  Start:  Thu Aug 15 13:43:33 2013   End:  Thu Aug 15 13:43:50 2013

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