BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy501
(962 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 85/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 114
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R YT V T WYRAPE+
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 175 LLGXKYYSTAVDI 187
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 85/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 115
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R YT V T WYRAPE+
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 175
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 176 LLGCKYYSTAVDI 188
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 85/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 63 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 121
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R YT V T WYRAPE+
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 181
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 182 LLGXKYYSTAVDI 194
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 248 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 85/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 63 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 121
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R YT V T WYRAPE+
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 181
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 182 LLGCKYYSTAVDI 194
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 248 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 85/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 114
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R YT V T WYRAPE+
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 175 LLGCKYYSTAVDI 187
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 85/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 114
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R YT V T WYRAPE+
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 175 LLGCKYYSTAVDI 187
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 85/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 113
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R YT V T WYRAPE+
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 174 LLGCKYYSTAVDI 186
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 85/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 113
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R YT V T WYRAPE+
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 174 LLGCKYYSTAVDI 186
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 85/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 114
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R YT V T WYRAPE+
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 175 LLGCKYYSTAVDI 187
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 85/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 113
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R YT V T WYRAPE+
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 174 LLGCKYYSTAVDI 186
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 85/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 118
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R YT V T WYRAPE+
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 178
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 179 LLGCKYYSTAVDI 191
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 245 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 116
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KPENLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 117 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 177 LLGCKYYSTAVDI 189
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 115
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KPENLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 176 LLGCKYYSTAVDI 188
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 83/133 (62%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + D +P +I++ ++Q+LQ
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFM-DASALTGIPLPLIKSYLFQLLQ 114
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KPENLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 115 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 175 LLGCKYYSTAVDI 187
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 85/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 114
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GL+F H H HRD+KP+NLL +K+ADFGLAR + R YT V T WYRAPE+
Sbjct: 115 GLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 175 LLGCKYYSTAVDI 187
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 79/131 (60%), Gaps = 2/131 (1%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+ LK+L H NLV L EV R L+ VFEY + + + +PE +++++ +Q LQ
Sbjct: 54 RMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQ 113
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR--SRPYTDYVSTRWYRAPEV 473
+ F H+H HRD+KPEN+L ++K+ DFG AR + S Y D V+TRWYR+PE+
Sbjct: 114 AVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPEL 173
Query: 474 LLHSTAYSAPI 484
L+ T Y P+
Sbjct: 174 LVGDTQYGPPV 184
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 83/133 (62%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ +L + + D +P +I++ ++Q+LQ
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFM-DASALTGIPLPLIKSYLFQLLQ 117
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KPENLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 118 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 178 LLGCKYYSTAVDI 190
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 83/133 (62%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ +L + + D +P +I++ ++Q+LQ
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFM-DASALTGIPLPLIKSYLFQLLQ 115
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KPENLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 176 LLGCKYYSTAVDI 188
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 117
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 178 LLGCKYYSTAVDI 190
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 116
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 177 LLGCKYYSTAVDI 189
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 117
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 178 LLGCKYYSTAVDI 190
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 114
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 175 LLGCKYYSTAVDI 187
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 115
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 176 LLGCKYYSTAVDI 188
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 118
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 178
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 179 LLGCKYYSTAVDI 191
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 245 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + D +P +I++ ++Q+LQ
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFM-DASALTGIPLPLIKSYLFQLLQ 113
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R YT V T WYRAPE+
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 174 LLGCKYYSTAVDI 186
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 114
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 175 LLGCKYYSTAVDI 187
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 113
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 173
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 174 LLGCKYYSTAVDI 186
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 116
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 177 LLGCKYYSTAVDI 189
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 114
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 175 LLGCKYYSTAVDI 187
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 115
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 176 LLGCKYYSTAVDI 188
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 113
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 173
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 174 LLGCKYYSTAVDI 186
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 114
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 175 LLGCKYYSTAVDI 187
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + + D +P +I++ ++Q+LQ
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFM-DASALTGIPLPLIKSYLFQLLQ 117
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 178 LLGCKYYSTAVDI 190
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 83/133 (62%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ ++L + D +P +I++ ++Q+LQ
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFM-DASALTGIPLPLIKSYLFQLLQ 117
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 178 LLGCKYYSTAVDI 190
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 83/131 (63%), Gaps = 2/131 (1%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
LK+L H N+V L +VI L VFE+M+++L +++ + L +S I+ +YQ+L+G+
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGV 132
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEVLL 475
A H+H HRD+KP+NLL +K+ADFGLAR I R YT V T WYRAP+VL+
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLM 192
Query: 476 HSTAYSAPIHL 486
S YS + +
Sbjct: 193 GSKKYSTSVDI 203
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
F F + P++SIIP + I L+ +ML ++P+KR +A+ +++
Sbjct: 258 FQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 83/131 (63%), Gaps = 2/131 (1%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
LK+L H N+V L +VI L VFE+M+++L +++ + L +S I+ +YQ+L+G+
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGV 132
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEVLL 475
A H+H HRD+KP+NLL +K+ADFGLAR I R YT V T WYRAP+VL+
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLM 192
Query: 476 HSTAYSAPIHL 486
S YS + +
Sbjct: 193 GSKKYSTSVDI 203
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
F F + P++SIIP + I L+ +ML ++P+KR +A+ +++
Sbjct: 258 FQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 82/133 (61%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ +L + D +P +I++ ++Q+LQ
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFM-DASALTGIPLPLIKSYLFQLLQ 116
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 177 LLGCKYYSTAVDI 189
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 82/133 (61%), Gaps = 5/133 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF--LPESIIRNMMYQVLQ 415
LK+L+H N+VKL +VI + LY VFE++ +L + D +P +I++ ++Q+LQ
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFM-DASALTGIPLPLIKSYLFQLLQ 117
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLAF H H HRD+KP+NLL +K+ADFGLAR + R Y V T WYRAPE+
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 474 LLHSTAYSAPIHL 486
LL YS + +
Sbjct: 178 LLGCKYYSTAVDI 190
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 81/131 (61%), Gaps = 2/131 (1%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
LK L HAN+V L ++I +L VFEY+ ++L Q + D + ++ ++Q+L+GL
Sbjct: 54 LKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGL 113
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR--EIRSRPYTDYVSTRWYRAPEVLL 475
A+ HR HRD+KP+NLL +K+ADFGLAR I ++ Y + V T WYR P++LL
Sbjct: 114 AYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILL 173
Query: 476 HSTAYSAPIHL 486
ST YS I +
Sbjct: 174 GSTDYSTQIDM 184
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
K L++LSH N++ L + + VF++M+ +L +I+D L S I+ M LQ
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQ 123
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS--RPYTDYVSTRWYRAPEV 473
GL ++H+H HRD+KP NLL ++K+ADFGLA+ S R Y V TRWYRAPE+
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPEL 183
Query: 474 LLHSTAYSAPIHL 486
L + Y + +
Sbjct: 184 LFGARMYGVGVDM 196
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 2/133 (1%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
K LK+L H NLV L EV ++ Y VFE++ + + L +++ ++Q++
Sbjct: 76 KLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIIN 135
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS--RPYTDYVSTRWYRAPEV 473
G+ F H H HRD+KPEN+L + +VK+ DFG AR + + Y D V+TRWYRAPE+
Sbjct: 136 GIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPEL 195
Query: 474 LLHSTAYSAPIHL 486
L+ Y + +
Sbjct: 196 LVGDVKYGKAVDV 208
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 79/131 (60%), Gaps = 2/131 (1%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
LK+L H+N+VKL +VI L VFE++ ++L +L+ + L ++ + Q+L G+
Sbjct: 54 LKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEVLL 475
A+ H HRD+KP+NLL +KIADFGLAR I R YT V T WYRAP+VL+
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLM 173
Query: 476 HSTAYSAPIHL 486
S YS I +
Sbjct: 174 GSKKYSTTIDI 184
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 79/131 (60%), Gaps = 2/131 (1%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
LK+L H+N+VKL +VI L VFE++ ++L +L+ + L ++ + Q+L G+
Sbjct: 54 LKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEVLL 475
A+ H HRD+KP+NLL +KIADFGLAR I R YT V T WYRAP+VL+
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLM 173
Query: 476 HSTAYSAPIHL 486
S YS I +
Sbjct: 174 GSKKYSTTIDI 184
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 79/131 (60%), Gaps = 2/131 (1%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
LK+L H+N+VKL +VI L VFE++ ++L +L+ + L ++ + Q+L G+
Sbjct: 54 LKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEVLL 475
A+ H HRD+KP+NLL +KIADFGLAR I R YT + T WYRAP+VL+
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLM 173
Query: 476 HSTAYSAPIHL 486
S YS I +
Sbjct: 174 GSKKYSTTIDI 184
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 7/136 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRD-----KFLPESIIRNMMYQ 412
+K+L H N+V+L +VI + L VFE+M +L + + R + L ++++ +Q
Sbjct: 57 MKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRA 470
+LQGLAF H + HRD+KP+NLL +K+ DFGLAR I ++ V T WYRA
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRA 176
Query: 471 PEVLLHSTAYSAPIHL 486
P+VL+ S YS I +
Sbjct: 177 PDVLMGSRTYSTSIDI 192
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 77/131 (58%), Gaps = 2/131 (1%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
LK+L H N+V+L +V+ + L VFE+ ++L + + L I+++ ++Q+L+GL
Sbjct: 55 LKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGL 114
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEVLL 475
F H HRD+KP+NLL +K+ADFGLAR I R Y+ V T WYR P+VL
Sbjct: 115 GFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLF 174
Query: 476 HSTAYSAPIHL 486
+ YS I +
Sbjct: 175 GAKLYSTSIDM 185
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 82/136 (60%), Gaps = 8/136 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
LK+L H N+++LK VI N L+ +FEY + +L + + D++ + +I++ +YQ++ G+
Sbjct: 87 LKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYM-DKNPDVSMRVIKSFLYQLINGV 145
Query: 418 AFMHRHGFFHRDMKPENLL-----CMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRA 470
F H HRD+KP+NLL T ++KI DFGLAR I R +T + T WYR
Sbjct: 146 NFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRP 205
Query: 471 PEVLLHSTAYSAPIHL 486
PE+LL S YS + +
Sbjct: 206 PEILLGSRHYSTSVDI 221
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 2/131 (1%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
LK+L H N+V+L +V+ + L VFE+ ++L + + L I+++ ++Q+L+GL
Sbjct: 55 LKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGL 114
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEVLL 475
F H HRD+KP+NLL +K+A+FGLAR I R Y+ V T WYR P+VL
Sbjct: 115 GFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLF 174
Query: 476 HSTAYSAPIHL 486
+ YS I +
Sbjct: 175 GAKLYSTSIDM 185
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 26/180 (14%)
Query: 356 KSLKKLSHANLVKLKEVIR------ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNM 409
K LK H N++ +K+++R E ++Y V + M+ +L+Q+I E + R
Sbjct: 105 KILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHV-RYF 163
Query: 410 MYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRP------YTDYV 463
+YQ+L+GL +MH HRD+KP NLL +KI DFG+AR + + P T+YV
Sbjct: 164 LYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV 223
Query: 464 STRWYRAPEVLLHSTAYSAPIH-----------LSRSQQFLFYSIDHVPPIQTTCLLAGT 512
+TRWYRAPE++L Y+ I L+R Q LF ++V +Q ++ GT
Sbjct: 224 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ--LFPGKNYVHQLQLIMMVLGT 281
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 82/143 (57%), Gaps = 13/143 (9%)
Query: 356 KSLKKLSHANLVKLKEVIR------ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNM 409
K LK H N++ +K+++R E ++Y V + M+ +L+Q+I E + R
Sbjct: 106 KILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHV-RYF 164
Query: 410 MYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRP------YTDYV 463
+YQ+L+GL +MH HRD+KP NLL +KI DFG+AR + + P T+YV
Sbjct: 165 LYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV 224
Query: 464 STRWYRAPEVLLHSTAYSAPIHL 486
+TRWYRAPE++L Y+ I L
Sbjct: 225 ATRWYRAPELMLSLHEYTQAIDL 247
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 84/138 (60%), Gaps = 8/138 (5%)
Query: 356 KSLKKLSHANLVKLKEVIRENDT-----LYFVFEYMKENLYQ-LIRDRDKFLPESIIRNM 409
+ L+ H N+V+L +V + T L VFE++ ++L L + + +P I++M
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 410 MYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSR-PYTDYVSTRWY 468
M+Q+L+GL F+H H HRD+KP+N+L + +K+ADFGLAR + T V T WY
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWY 185
Query: 469 RAPEVLLHSTAYSAPIHL 486
RAPEVLL S+ Y+ P+ L
Sbjct: 186 RAPEVLLQSS-YATPVDL 202
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 84/141 (59%), Gaps = 14/141 (9%)
Query: 356 KSLKKLSHANLVKLKEVIRENDT-----LYFVFEYMKENLYQLIRDRDKF----LPESII 406
+ L+ H N+V+L +V + T L VFE++ ++L + DK +P I
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL---DKVPEPGVPTETI 122
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSR-PYTDYVST 465
++MM+Q+L+GL F+H H HRD+KP+N+L + +K+ADFGLAR + T V T
Sbjct: 123 KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVT 182
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
WYRAPEVLL S+ Y+ P+ L
Sbjct: 183 LWYRAPEVLLQSS-YATPVDL 202
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 77 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 134
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDI 215
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 73 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 130
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDI 211
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 260 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 27/150 (18%)
Query: 362 SHANLVKLKEVIR-END-TLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
H N+V L V+R +ND +Y VF+YM+ +L+ +IR L + ++YQ+++ + +
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRA--NILEPVHKQYVVYQLIKVIKY 124
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAR---EIR-------------------SR 457
+H G HRDMKP N+L VK+ADFGL+R IR +
Sbjct: 125 LHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 458 PY-TDYVSTRWYRAPEVLLHSTAYSAPIHL 486
P TDYV+TRWYRAPE+LL ST Y+ I +
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDM 214
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 84/141 (59%), Gaps = 14/141 (9%)
Query: 356 KSLKKLSHANLVKLKEVIRENDT-----LYFVFEYMKENLYQLIRDRDKF----LPESII 406
+ L+ H N+V+L +V + T L VFE++ ++L + DK +P I
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL---DKVPEPGVPTETI 122
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSR-PYTDYVST 465
++MM+Q+L+GL F+H H HRD+KP+N+L + +K+ADFGLAR + T V T
Sbjct: 123 KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVT 182
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
WYRAPEVLL S+ Y+ P+ L
Sbjct: 183 LWYRAPEVLLQSS-YATPVDL 202
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 77 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 134
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDI 215
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 73 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 130
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDI 211
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 260 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 73 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 130
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVAT 190
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDI 211
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 260 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 81/141 (57%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 75 KILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 132
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDI 213
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 262 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 311
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 71 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 128
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDI 209
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 258 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 307
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 73 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 130
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDI 211
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 260 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 75 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 132
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDI 213
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 262 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 311
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 71 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 128
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDI 209
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 258 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 307
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 78 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 135
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 195
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDI 216
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 265 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 314
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 79 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 136
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 137 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 196
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDI 217
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 266 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 315
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 70 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 127
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 128 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 187
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDI 208
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 257 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 306
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 77 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 134
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDI 215
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V M +LY+L++ + L I +
Sbjct: 93 KILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT--QHLSNDHICYFL 150
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDI 231
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 280 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 329
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 77 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 134
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDI 215
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 81 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 138
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 139 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 198
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDI 219
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 268 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 317
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 73 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 130
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDI 211
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 260 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 93 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 150
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDI 231
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 280 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 329
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 77 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKC--QHLSNDHICYFL 134
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDI 215
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 81/141 (57%), Gaps = 12/141 (8%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 75 KILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 132
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVST 465
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+YV+T
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 466 RWYRAPEVLLHSTAYSAPIHL 486
RWYRAPE++L+S Y+ I +
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDI 213
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 262 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 311
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 80/138 (57%), Gaps = 8/138 (5%)
Query: 356 KSLKKLSHANLVKLKEVIRENDT-----LYFVFEYMKENLYQ-LIRDRDKFLPESIIRNM 409
+ L+ H N+V+L +V + T + VFE++ ++L L + LP I+++
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 125
Query: 410 MYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSR-PYTDYVSTRWY 468
M Q L+GL F+H + HRD+KPEN+L VK+ADFGLAR + T V T WY
Sbjct: 126 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWY 185
Query: 469 RAPEVLLHSTAYSAPIHL 486
RAPEVLL ST Y+ P+ +
Sbjct: 186 RAPEVLLQST-YATPVDM 202
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 84/140 (60%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 95 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 154
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P Y+ +R
Sbjct: 155 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 214
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 215 YYRAPELIFGATDYTSSIDV 234
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKR 799
FKFPQ + P+T + P P+AI L +L Y P+ R
Sbjct: 285 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 322
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 84/140 (60%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 105 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 164
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P Y+ +R
Sbjct: 165 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 224
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 225 YYRAPELIFGATDYTSSIDV 244
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKR 799
FKFPQ + P+T + P P+AI L +L Y P+ R
Sbjct: 295 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 332
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 84/140 (60%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 72 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 131
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P Y+ +R
Sbjct: 132 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 191
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 192 YYRAPELIFGATDYTSSIDV 211
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKR 799
FKFPQ + P+T + P P+AI L +L Y P+ R
Sbjct: 262 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 299
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 84/140 (60%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 160
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P Y+ +R
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 220
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 221 YYRAPELIFGATDYTSSIDV 240
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKR 799
FKFPQ + P+T + P P+AI L +L Y P+ R
Sbjct: 291 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 328
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 84/140 (60%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 103 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 162
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P Y+ +R
Sbjct: 163 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 222
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 223 YYRAPELIFGATDYTSSIDV 242
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKR 799
FKFPQ + P+T + P P+AI L +L Y P+ R
Sbjct: 293 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 330
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 84/140 (60%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 146 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 205
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P Y+ +R
Sbjct: 206 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 265
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 266 YYRAPELIFGATDYTSSIDV 285
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKR 799
FKFPQ + P+T + P P+AI L +L Y P+ R
Sbjct: 336 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 373
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 84/140 (60%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P Y+ +R
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 187 YYRAPELIFGATDYTSSIDV 206
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
F FPQ + P+T + P P+AI L +L Y P+ R T ++ +
Sbjct: 257 FAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 84/140 (60%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 80 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 139
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P Y+ +R
Sbjct: 140 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 199
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 200 YYRAPELIFGATDYTSSIDV 219
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKR 799
FKFPQ + P+T + P P+AI L +L Y P+ R
Sbjct: 270 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 307
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 84/140 (60%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P Y+ +R
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 187 YYRAPELIFGATDYTSSIDV 206
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FKFPQ + P+T + P P+AI L +L Y P+ R T ++ +
Sbjct: 257 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 84/140 (60%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P Y+ +R
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 187 YYRAPELIFGATDYTSSIDV 206
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FKFPQ + P+T + P P+AI L +L Y P+ R T ++ +
Sbjct: 257 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 89/170 (52%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEVIRENDTL------YFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V ++TL Y V +M +L +L++ L E I+ ++Y
Sbjct: 78 LKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK--LGEDRIQFLVY 135
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H G HRD+KP NL +KI DFGLAR+ S V TRWYRAP
Sbjct: 136 QMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-MXGXVVTRWYRAP 194
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
EV+L+ Y+ + + + + LF DH+ ++ + GT
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGT 244
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P+ + F SI+ +ASP A++L+E ML + +R TA ++L+
Sbjct: 258 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 55/138 (39%), Positives = 80/138 (57%), Gaps = 8/138 (5%)
Query: 356 KSLKKLSHANLVKLKEVIRENDT-----LYFVFEYMKENLYQ-LIRDRDKFLPESIIRNM 409
+ L+ H N+V+L +V + T + VFE++ ++L L + LP I+++
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 410 MYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD-YVSTRWY 468
M Q L+GL F+H + HRD+KPEN+L VK+ADFGLAR + D V T WY
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWY 177
Query: 469 RAPEVLLHSTAYSAPIHL 486
RAPEVLL ST Y+ P+ +
Sbjct: 178 RAPEVLLQST-YATPVDM 194
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-MTGYVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 12/139 (8%)
Query: 358 LKKLSHANLVKLKEVIREND-----TLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQ 412
L + H N++ +++++R + +Y V + M+ +LY+L++ + L I +YQ
Sbjct: 95 LLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ--LSNDHICYFLYQ 152
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR-----EIRSRPYTDYVSTRW 467
+L+GL ++H HRD+KP NLL T +KI DFGLAR + T+ V+TRW
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 468 YRAPEVLLHSTAYSAPIHL 486
YRAPE++L+S Y+ I +
Sbjct: 213 YRAPEIMLNSKGYTKSIDI 231
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +V + + P + A+ L++ ML +NP+KR T +++L+
Sbjct: 280 ARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALA 329
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 16/143 (11%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 77 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 134
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY-------V 463
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + P D+ V
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR--VADPDHDHTGFLXEXV 192
Query: 464 STRWYRAPEVLLHSTAYSAPIHL 486
+TRWYRAPE++L+S Y+ I +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDI 215
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 16/143 (11%)
Query: 356 KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I +
Sbjct: 78 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 135
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY-------V 463
YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR + P D+ V
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR--VADPDHDHTGFLXEXV 193
Query: 464 STRWYRAPEVLLHSTAYSAPIHL 486
+TRWYRAPE++L+S Y+ I +
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDI 216
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 265 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 314
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 89/170 (52%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L++ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 134
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-MTGYVATRWYRAP 193
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 266 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 306
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 161
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 162 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 220
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ +Q L GT
Sbjct: 221 EIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGT 270
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N PQ + F + A+P A+ L+E ML + KR TA ++L+
Sbjct: 284 ARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALA 333
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 138
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-MTGYVATRWYRAP 197
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 270 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 310
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 137
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-MTGYVATRWYRAP 196
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 309
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 137
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-MTGYVATRWYRAP 196
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 309
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 143
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-MTGYVATRWYRAP 202
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 252
Score = 32.7 bits (73), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 275 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 315
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 86/157 (54%), Gaps = 19/157 (12%)
Query: 349 MVVCFYRKSLKKLSHANLVKLKEVI--RENDTLYFVFEYMKENLYQLIR--------DRD 398
M C L++L H N++ L++V + ++ +F+Y + +L+ +I+ +
Sbjct: 63 MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKP 122
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGT----ELVKIADFGLAREI 454
LP ++++++YQ+L G+ ++H + HRD+KP N+L MG VKIAD G AR
Sbjct: 123 VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
Query: 455 RS--RPYTD---YVSTRWYRAPEVLLHSTAYSAPIHL 486
S +P D V T WYRAPE+LL + Y+ I +
Sbjct: 183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDI 219
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGL R T YV+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE-MTGYVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 83/140 (59%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P + +R
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 187 YYRAPELIFGATDYTSSIDV 206
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FKFPQ + P+T + P P+AI L +L Y P+ R T ++ +
Sbjct: 257 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 87.4 bits (215), Expect = 4e-17, Method: Composition-based stats.
Identities = 54/138 (39%), Positives = 79/138 (57%), Gaps = 8/138 (5%)
Query: 356 KSLKKLSHANLVKLKEVIRENDT-----LYFVFEYMKENLYQ-LIRDRDKFLPESIIRNM 409
+ L+ H N+V+L +V + T + VFE++ ++L L + LP I+++
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 410 MYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSR-PYTDYVSTRWY 468
M Q L+GL F+H + HRD+KPEN+L VK+ADFGLAR + V T WY
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWY 177
Query: 469 RAPEVLLHSTAYSAPIHL 486
RAPEVLL ST Y+ P+ +
Sbjct: 178 RAPEVLLQST-YATPVDM 194
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 83/140 (59%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 160
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P + +R
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 220
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 221 YYRAPELIFGATDYTSSIDV 240
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKR 799
FKFPQ + P+T + P P+AI L +L Y P+ R
Sbjct: 291 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 328
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 87.0 bits (214), Expect = 4e-17, Method: Composition-based stats.
Identities = 56/139 (40%), Positives = 81/139 (58%), Gaps = 10/139 (7%)
Query: 356 KSLKKLSHANLVKLKEVIRENDT-----LYFVFEYMKENLYQ-LIRDRDKFLPESIIRNM 409
+ L+ H N+V+L +V + T + VFE++ ++L L + LP I+++
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 410 MYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY--VSTRW 467
M Q L+GL F+H + HRD+KPEN+L VK+ADFGLAR I S + V T W
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQMALFPVVVTLW 176
Query: 468 YRAPEVLLHSTAYSAPIHL 486
YRAPEVLL ST Y+ P+ +
Sbjct: 177 YRAPEVLLQST-YATPVDM 194
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 83/140 (59%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 79 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 138
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P + +R
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 198
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 199 YYRAPELIFGATDYTSSIDV 218
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKRPT 801
FKFPQ + P+T + P P+AI L +L Y P+ R T
Sbjct: 269 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 308
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 83/140 (59%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 75 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 134
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P + +R
Sbjct: 135 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 194
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 195 YYRAPELIFGATDYTSSIDV 214
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKR 799
FKFPQ + P+T + P P+AI L +L Y P+ R
Sbjct: 265 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 302
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 83/140 (59%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 79 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 138
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P + +R
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 198
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 199 YYRAPELIFGATDYTSSIDV 218
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKR 799
FKFPQ + P+T + P P+AI L +L Y P+ R
Sbjct: 269 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 306
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 83/140 (59%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P + +R
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 187 YYRAPELIFGATDYTSSIDV 206
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FKFPQ + P+T + P P+AI L +L Y P+ R T ++ +
Sbjct: 257 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 83/140 (59%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 86 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 145
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P + +R
Sbjct: 146 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 205
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 206 YYRAPELIFGATDYTSSIDV 225
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKR 799
FKFPQ + P+T + P P+AI L +L Y P+ R
Sbjct: 276 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 313
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 83/140 (59%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P + +R
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 187 YYRAPELIFGATDYTSSIDV 206
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FKFPQ + P+T + P P+AI L +L Y P+ R T ++ +
Sbjct: 257 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 83/140 (59%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 71 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 130
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P + +R
Sbjct: 131 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 190
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 191 YYRAPELIFGATDYTSSIDV 210
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FKFPQ + P+T + P P+AI L +L Y P+ R T ++ +
Sbjct: 261 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 306
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 83/140 (59%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ E +Y++ R + LP ++
Sbjct: 68 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 127
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P + +R
Sbjct: 128 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 187
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 188 YYRAPELIFGATDYTSSIDV 207
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FKFPQ + P+T + P P+AI L +L Y P+ R T ++ +
Sbjct: 258 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 303
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 89/170 (52%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 139
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR + T YV+TRWYRAP
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-ADEMTGYVATRWYRAP 198
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 89/170 (52%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 139
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR + T YV+TRWYRAP
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-ADEMTGYVATRWYRAP 198
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 73 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 130
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 131 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 189
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 239
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 262 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 302
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 155
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 214
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 264
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 278 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 327
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 139
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 198
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
Score = 32.7 bits (73), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 89/170 (52%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 139
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR + T YV+TRWYRAP
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-ADEMTGYVATRWYRAP 198
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 271 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 137
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 196
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 269 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 309
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 74 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 131
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 132 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 190
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 191 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 240
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 263 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 303
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 134
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 193
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 257 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 306
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 134
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 193
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 266 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 306
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 128
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 187
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 260 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 300
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 129
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 188
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 238
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 261 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 301
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 151
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 210
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 260
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 274 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 323
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 138
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 197
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 261 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 310
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 134
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 193
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 257 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 306
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 152
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 211
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 261
Score = 32.7 bits (73), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 275 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 324
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 137
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 196
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 309
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 144
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 203
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 276 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 316
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 144
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 203
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 267 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 316
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 85 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 142
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 143 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 201
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 202 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 251
Score = 33.1 bits (74), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 265 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 314
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 144
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 203
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 267 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 316
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 151
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 210
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 260
Score = 33.1 bits (74), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 274 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 323
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 128
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 187
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 251 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 300
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 138
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 197
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 261 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 310
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 143
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 202
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 252
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 275 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 315
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 129
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 188
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 238
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 252 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 301
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 138
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 197
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 261 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 310
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 33.1 bits (74), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 255 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 152
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 211
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 261
Score = 33.1 bits (74), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 275 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 324
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK L H N++ L +V I + +Y V M +L +++ + L + ++ ++Y
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS--QALSDEHVQFLVY 138
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H G HRD+KP N+ ++I DFGLAR+ T YV+TRWYRAP
Sbjct: 139 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA-DEEMTGYVATRWYRAP 197
Query: 472 EVLLHSTAYSAPIHL 486
E++L+ Y+ + +
Sbjct: 198 EIMLNWMHYNQTVDI 212
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ L + ++ ++Y
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK--LTDDHVQFLIY 128
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T YV+TRWYRAP
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGYVATRWYRAP 187
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Score = 33.1 bits (74), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 251 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 300
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI D+GLAR T YV+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE-MTGYVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK L H N++ L +V I + +Y V M +L +++ + L + ++ ++Y
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC--QALSDEHVQFLVY 138
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H G HRD+KP N+ ++I DFGLAR+ T YV+TRWYRAP
Sbjct: 139 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA-DEEMTGYVATRWYRAP 197
Query: 472 EVLLHSTAYSAPIHL 486
E++L+ Y+ + +
Sbjct: 198 EIMLNWMHYNQTVDI 212
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 82/140 (58%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYF--VFEYMKENLYQLIRDRDKF---LPESIIRN 408
++KL H N+V+L+ + D +Y V +Y+ +Y++ R + LP ++
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL 126
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A++ +R P + +R
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y++ I +
Sbjct: 187 YYRAPELIFGATDYTSSIDV 206
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 763 FKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
F FPQ + P+T + P P+AI L +L Y P+ R T ++ +
Sbjct: 257 FAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 356 KSLKKLSHANLVKLKEVIREN--------DTLYFVFEYMKENLYQLIRDRDKFLPESIIR 407
K L+ L H N+V L E+ R ++Y VF++ + +L L+ + S I+
Sbjct: 69 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK 128
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRP--YTD 461
+M +L GL ++HR+ HRDMK N+L ++K+ADFGLAR S+P Y +
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 462 YVSTRWYRAPEVLLHSTAYSAPIHL 486
V T WYR PE+LL Y PI L
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDL 213
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 155
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR YV+TRWYRAP
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MXGYVATRWYRAP 214
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 264
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 287 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 327
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 356 KSLKKLSHANLVKLKEVIREN--------DTLYFVFEYMKENLYQLIRDRDKFLPESIIR 407
K L+ L H N+V L E+ R ++Y VF++ + +L L+ + S I+
Sbjct: 69 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK 128
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRP--YTD 461
+M +L GL ++HR+ HRDMK N+L ++K+ADFGLAR S+P Y +
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 462 YVSTRWYRAPEVLLHSTAYSAPIHL 486
V T WYR PE+LL Y PI L
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDL 213
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 75/135 (55%), Gaps = 10/135 (7%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V +R Y V +M+ +L +++ + E I+ ++Y
Sbjct: 77 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK---FSEEKIQYLVY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H G HRD+KP NL +KI DFGLAR + T YV TRWYRAP
Sbjct: 134 QMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-MTGYVVTRWYRAP 192
Query: 472 EVLLHSTAYSAPIHL 486
EV+L Y+ + +
Sbjct: 193 EVILSWMHYNQTVDI 207
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 766 PQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
PQ R FT + P ASP A L+E ML + KR TA Q+L+
Sbjct: 264 PQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 356 KSLKKLSHANLVKLKEVIREN--------DTLYFVFEYMKENLYQLIRDRDKFLPESIIR 407
K L+ L H N+V L E+ R ++Y VF++ + +L L+ + S I+
Sbjct: 68 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK 127
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRP--YTD 461
+M +L GL ++HR+ HRDMK N+L ++K+ADFGLAR S+P Y +
Sbjct: 128 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 187
Query: 462 YVSTRWYRAPEVLLHSTAYSAPIHL 486
V T WYR PE+LL Y PI L
Sbjct: 188 RVVTLWYRPPELLLGERDYGPPIDL 212
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 356 KSLKKLSHANLVKLKEVIRENDT--------LYFVFEYMKENLYQLIRDRDKFLPESIIR 407
K L+ L H N+V L E+ R + +Y VF++ + +L L+ + S I+
Sbjct: 69 KILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK 128
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRP--YTD 461
+M +L GL ++HR+ HRDMK N+L ++K+ADFGLAR S+P Y +
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 462 YVSTRWYRAPEVLLHSTAYSAPIHL 486
V T WYR PE+LL Y PI L
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDL 213
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 74/135 (54%), Gaps = 10/135 (7%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V +R Y V +M+ +L +++ E I+ ++Y
Sbjct: 95 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGME---FSEEKIQYLVY 151
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H G HRD+KP NL +KI DFGLAR + T YV TRWYRAP
Sbjct: 152 QMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-MTGYVVTRWYRAP 210
Query: 472 EVLLHSTAYSAPIHL 486
EV+L Y+ + +
Sbjct: 211 EVILSWMHYNQTVDI 225
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 766 PQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
PQ R FT + P ASP A L+E ML + KR TA Q+L+
Sbjct: 282 PQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI FGLAR T YV+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE-MTGYVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR T V+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MTGXVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 128
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR +V+TRWYRAP
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MAGFVATRWYRAP 187
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 251 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 300
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR +V+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MAGFVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI D GLAR T YV+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE-MTGYVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK L H N++ L +V I + +Y V M +L +++ + L + ++ ++Y
Sbjct: 73 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC--QALSDEHVQFLVY 130
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H G HRD+KP N+ ++I DFGLAR+ T YV+TRWYRAP
Sbjct: 131 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA-DEEMTGYVATRWYRAP 189
Query: 472 EVLLHSTAYSAPIHL 486
E++L+ Y+ + +
Sbjct: 190 EIMLNWMHYNQTVDI 204
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR +V+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MAGFVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 255 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI D GLAR T YV+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE-MTGYVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 78/143 (54%), Gaps = 19/143 (13%)
Query: 356 KSLKKLSHANLVKLKEVIR----EN-DTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K LK H N++ + + R EN + +Y + E M+ +L+++I + L + I+ +
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QMLSDDHIQYFI 118
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI------RSRP------ 458
YQ L+ + +H HRD+KP NLL +K+ DFGLAR I S P
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 459 YTDYVSTRWYRAPEVLLHSTAYS 481
T+YV+TRWYRAPEV+L S YS
Sbjct: 179 MTEYVATRWYRAPEVMLTSAKYS 201
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 766 PQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSL 806
P + P + P +P I L++ ML ++P+KR TA+++L
Sbjct: 264 PMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI D GLAR T YV+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE-MTGYVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DF LAR T YV+TRWYRAP
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE-MTGYVATRWYRAP 191
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 18/170 (10%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK + H N++ L +V + E + +Y V M +L +++ + L + ++ ++Y
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIY 152
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAP 471
Q+L+GL ++H HRD+KP NL +KI DFGLAR V+TRWYRAP
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-MXGXVATRWYRAP 211
Query: 472 EVLLHSTAYSAPIHLSR---------SQQFLFYSIDHVPPIQTTCLLAGT 512
E++L+ Y+ + + + + LF DH+ ++ L GT
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 261
Score = 33.1 bits (74), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 275 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 324
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 28/192 (14%)
Query: 356 KSLKKLSHANLVKLKEVIR--------------ENDTLYFVFEYMKENLYQLIRDRDKFL 401
K +++L H N+VK+ E++ E +++Y V EYM+ +L ++ L
Sbjct: 60 KIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP--L 117
Query: 402 PESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELV-KIADFGLAREI-----R 455
E R MYQ+L+GL ++H HRD+KP NL +LV KI DFGLAR +
Sbjct: 118 LEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH 177
Query: 456 SRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPIQTTCLLAGTERL 515
++ + T+WYR+P +LL Y+ I + + +F + + L AG L
Sbjct: 178 KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDM-WAAGCIFAEM-----LTGKTLFAGAHEL 231
Query: 516 KSSYILLHTLPL 527
+ ++L ++P+
Sbjct: 232 EQMQLILESIPV 243
Score = 33.5 bits (75), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 772 PFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
P T ++P S +A+ +E +L ++P R TA+++LS
Sbjct: 270 PLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 7/171 (4%)
Query: 338 ILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRD 396
I ++ +S+RD + + +KL H N+V+L + I+E Y VF+ + L++ I
Sbjct: 62 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA 121
Query: 397 RDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG---TELVKIADFGLARE 453
R+ F E+ + + Q+L+ +A+ H +G HR++KPENLL VK+ADFGLA E
Sbjct: 122 RE-FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180
Query: 454 IR-SRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
+ S + + T Y +PEV L YS P+ + L+ + PP
Sbjct: 181 VNDSEAWHGFAGTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPPF 230
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 781 SPDAIHLMESMLAYNPSKRPTAQQSLSI-----KREVSLSFVLLKKLNRLEKYRLKNARE 835
+P+A L++SML NP KR TA Q+L + + V+ + ++ L+K+ NAR
Sbjct: 258 TPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKF---NARR 314
Query: 836 TLQA 839
L+
Sbjct: 315 KLKG 318
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 19/143 (13%)
Query: 356 KSLKKLSHANLVKLKEVIR----EN-DTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K LK H N++ + + R EN + +Y + E M+ +L+++I + L + I+ +
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QMLSDDHIQYFI 118
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI------RSRP------ 458
YQ L+ + +H HRD+KP NLL +K+ DFGLAR I S P
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 459 YTDYVSTRWYRAPEVLLHSTAYS 481
T+ V+TRWYRAPEV+L S YS
Sbjct: 179 MTEXVATRWYRAPEVMLTSAKYS 201
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 766 PQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSL 806
P + P + P +P I L++ ML ++P+KR TA+++L
Sbjct: 264 PMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 7/171 (4%)
Query: 338 ILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRD 396
I ++ +S+RD + + +KL H N+V+L + I+E Y VF+ + L++ I
Sbjct: 39 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA 98
Query: 397 RDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG---TELVKIADFGLARE 453
R+ F E+ + + Q+L+ +A+ H +G HR++KPENLL VK+ADFGLA E
Sbjct: 99 RE-FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157
Query: 454 IR-SRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
+ S + + T Y +PEV L YS P+ + L+ + PP
Sbjct: 158 VNDSEAWHGFAGTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPPF 207
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 781 SPDAIHLMESMLAYNPSKRPTAQQSLSI 808
+P+A L++SML NP KR TA Q+L +
Sbjct: 235 TPEAKSLIDSMLTVNPKKRITADQALKV 262
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 77/143 (53%), Gaps = 19/143 (13%)
Query: 356 KSLKKLSHANLVKLKEVIR----EN-DTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMM 410
K LK H N++ + + R EN + +Y + E M+ +L+++I + L + I+ +
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QMLSDDHIQYFI 118
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI------RSRP------ 458
YQ L+ + +H HRD+KP NLL +K+ DFGLAR I S P
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 459 YTDYVSTRWYRAPEVLLHSTAYS 481
++V+TRWYRAPEV+L S YS
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYS 201
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 766 PQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSL 806
P + P + P +P I L++ ML ++P+KR TA+++L
Sbjct: 264 PMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFE-YMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LKKL H N++KL E++ ++ + Y V E Y L+ I R +F R ++ QV G
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR-IIKQVFSG 133
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL---VKIADFGLAREIRSR-PYTDYVSTRWYRAPE 472
+ +MH+H HRD+KPEN+L E +KI DFGL+ + D + T +Y APE
Sbjct: 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPE 193
Query: 473 VLLHSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
VL Y + + L+ + PP
Sbjct: 194 VL--RGTYDEKCDVWSAGVILYILLSGTPPF 222
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDPPLHAYFQVG----GPTTRVTSLKREAASEHISARS 111
LREV+ LKKL H N++KL E++ D +++ VG G +KR+ SEH +AR
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSS--SFYIVGELYTGGELFDEIIKRKRFSEHDAARI 126
Query: 112 I--------YPTVKNTLTLNVLPQPVTLYSHDYD 137
I Y N + ++ P+ + L S + D
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEKD 160
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKL------KEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L ++ + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLLY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 471 PEVLL 475
PEV+L
Sbjct: 194 PEVIL 198
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 79.7 bits (195), Expect = 6e-15, Method: Composition-based stats.
Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Query: 338 ILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRD 396
I ++ +S+RD + + +KL H N+V+L + I+E Y VF+ + L++ I
Sbjct: 38 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA 97
Query: 397 RDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGT---ELVKIADFGLARE 453
R+ F E+ + + Q+L+ +A+ H +G HR++KPENLL VK+ADFGLA E
Sbjct: 98 RE-FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 156
Query: 454 IR-SRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPP 502
+ S + + T Y +PEV L YS P+ + L+ + PP
Sbjct: 157 VNDSEAWHGFAGTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPP 205
Score = 33.5 bits (75), Expect = 0.55, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 781 SPDAIHLMESMLAYNPSKRPTAQQSLSI 808
+P+A L++SML NP KR TA Q+L +
Sbjct: 234 TPEAKSLIDSMLTVNPKKRITADQALKV 261
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFE-YMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LKKL H N++KL E++ ++ + Y V E Y L+ I R +F R ++ QV G
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR-IIKQVFSG 133
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL---VKIADFGLAREIRSR-PYTDYVSTRWYRAPE 472
+ +MH+H HRD+KPEN+L E +KI DFGL+ + D + T +Y APE
Sbjct: 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPE 193
Query: 473 VLLHSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
VL Y + + L+ + PP
Sbjct: 194 VL--RGTYDEKCDVWSAGVILYILLSGTPPF 222
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDPPLHAYFQVG----GPTTRVTSLKREAASEHISARS 111
LREV+ LKKL H N++KL E++ D +++ VG G +KR+ SEH +AR
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSS--SFYIVGELYTGGELFDEIIKRKRFSEHDAARI 126
Query: 112 I--------YPTVKNTLTLNVLPQPVTLYSHDYD 137
I Y N + ++ P+ + L S + D
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEKD 160
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 79.7 bits (195), Expect = 8e-15, Method: Composition-based stats.
Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Query: 338 ILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRD 396
I ++ +S+RD + + +KL H N+V+L + I+E Y VF+ + L++ I
Sbjct: 39 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA 98
Query: 397 RDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGT---ELVKIADFGLARE 453
R+ F E+ + + Q+L+ +A+ H +G HR++KPENLL VK+ADFGLA E
Sbjct: 99 RE-FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157
Query: 454 IR-SRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPP 502
+ S + + T Y +PEV L YS P+ + L+ + PP
Sbjct: 158 VNDSEAWHGFAGTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPP 206
Score = 33.5 bits (75), Expect = 0.59, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 781 SPDAIHLMESMLAYNPSKRPTAQQSLSI 808
+P+A L++SML NP KR TA Q+L +
Sbjct: 235 TPEAKSLIDSMLTVNPKKRITADQALKV 262
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFE-YMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LKKL H N++KL E++ ++ + Y V E Y L+ I R +F R ++ QV G
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR-IIKQVFSG 133
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL---VKIADFGLAREIRSR-PYTDYVSTRWYRAPE 472
+ +MH+H HRD+KPEN+L E +KI DFGL+ + D + T +Y APE
Sbjct: 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPE 193
Query: 473 VL 474
VL
Sbjct: 194 VL 195
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDPPLHAYFQVG----GPTTRVTSLKREAASEHISARS 111
LREV+ LKKL H N++KL E++ D +++ VG G +KR+ SEH +AR
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSS--SFYIVGELYTGGELFDEIIKRKRFSEHDAARI 126
Query: 112 I--------YPTVKNTLTLNVLPQPVTLYSHDYD 137
I Y N + ++ P+ + L S + D
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEKD 160
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDT-----LYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQ 412
L H N++ L+++ + LY V E M+ +L Q+I D+ + I+ MY
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYH 142
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-TDYVSTRWYRAP 471
+L GL +H G HRD+ P N+L + I DF LARE + T YV+ RWYRAP
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAP 202
Query: 472 EVLLHSTAYS 481
E+++ ++
Sbjct: 203 ELVMQFKGFT 212
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 773 FTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSL 806
+T+++P A P A+ L+ ML +NP +R + +Q+L
Sbjct: 282 WTAVVPTADPVALDLIAKMLEFNPQRRISTEQAL 315
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDT-----LYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQ 412
L H N++ L+++ + LY V E M+ +L Q+I D+ + I+ MY
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYH 142
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-TDYVSTRWYRAP 471
+L GL +H G HRD+ P N+L + I DF LARE + T YV+ RWYRAP
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAP 202
Query: 472 EVLLHSTAYS 481
E+++ ++
Sbjct: 203 ELVMQFKGFT 212
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 773 FTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSL 806
+T+++P A P A+ L+ ML +NP +R + +Q+L
Sbjct: 282 WTAVVPTADPVALDLIAKMLEFNPQRRISTEQAL 315
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKL------KEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L ++ + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLLY 126
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 127 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRA 186
Query: 471 PEVLL 475
PEV+L
Sbjct: 187 PEVIL 191
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKL------KEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L ++ + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLLY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 471 PEVLL 475
PEV+L
Sbjct: 194 PEVIL 198
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKL------KEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L ++ + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLLY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 471 PEVLL 475
PEV+L
Sbjct: 194 PEVIL 198
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKL------KEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L ++ + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 471 PEVLL 475
PEV+L
Sbjct: 194 PEVIL 198
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L V + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 471 PEVLL 475
PEV+L
Sbjct: 194 PEVIL 198
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L V + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 471 PEVLL 475
PEV+L
Sbjct: 194 PEVIL 198
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L V + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 471 PEVLL 475
PEV+L
Sbjct: 194 PEVIL 198
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKL------KEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L ++ + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLY 171
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 231
Query: 471 PEVLL 475
PEV+L
Sbjct: 232 PEVIL 236
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L V + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 471 PEVLL 475
PEV+L
Sbjct: 194 PEVIL 198
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 11/136 (8%)
Query: 358 LKKLSHANLVKL------KEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK ++H N++ L ++ + E +Y V E M NL Q+I L + ++Y
Sbjct: 77 LKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LDHERMSYLLY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSR-PYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR + T YV TR+YRA
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRA 193
Query: 471 PEVLLHSTAYSAPIHL 486
PEV+L Y+A + +
Sbjct: 194 PEVIL-GMGYAANVDI 208
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 11/140 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDT------LYFVFEYMKENLYQLIRDRDKF---LPESIIRN 408
++ + H N+V LK N L V EY+ E +Y+ R K +P +I+
Sbjct: 86 MRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKL 145
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELVKIADFGLARE-IRSRPYTDYVSTR 466
MYQ+L+ LA++H G HRD+KP+NLL + ++K+ DFG A+ I P + +R
Sbjct: 146 YMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR 205
Query: 467 WYRAPEVLLHSTAYSAPIHL 486
+YRAPE++ +T Y+ I +
Sbjct: 206 YYRAPELIFGATNYTTNIDI 225
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 15/102 (14%)
Query: 720 YTYHVPPIQTTCLLA-------------GTERLKSSYILLHTLPLYTCYTLASN-MNFKF 765
YT ++ T C++A G ++L +L T T+ N M KF
Sbjct: 219 YTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKF 278
Query: 766 PQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKRPTAQQSL 806
PQ R PF+ + P PDAI L+ +L Y PS R TA ++L
Sbjct: 279 PQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEAL 320
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L V + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 471 PEVLL 475
PEV+L
Sbjct: 194 PEVIL 198
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 69/123 (56%), Gaps = 8/123 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFE-YMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK L H N++KL +V + Y V E Y L++ I +R KF E N+M Q+L G
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF-DECDAANIMKQILSG 158
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL---VKIADFGLAREIRSRPYT--DYVSTRWYRAP 471
+ ++H+H HRD+KPEN+L +KI DFGL+ S+ Y D + T +Y AP
Sbjct: 159 ICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS-FFSKDYKLRDRLGTAYYIAP 217
Query: 472 EVL 474
EVL
Sbjct: 218 EVL 220
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 10/173 (5%)
Query: 338 ILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRD 396
I ++ +S+RD + + + L H+N+V+L + I E Y VF+ + L++ I
Sbjct: 37 INTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA 96
Query: 397 RDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLL----CMGTELVKIADFGLAR 452
R+ + E+ + + Q+L+ + H+ G HRD+KPENLL C G VK+ADFGLA
Sbjct: 97 RE-YYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGA-AVKLADFGLAI 154
Query: 453 EIRS--RPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
E++ + + + T Y +PEV L AY P+ + L+ + PP
Sbjct: 155 EVQGDQQAWFGFAGTPGYLSPEV-LRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKL------KEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L ++ + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLY 171
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 231
Query: 471 PEVLL 475
PEV+L
Sbjct: 232 PEVIL 236
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 15/169 (8%)
Query: 338 ILSRHVSSRDEMVVCFYRK--SLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIR 395
I+++ V ++ +M R+ L+ L H +++KL +VI+ D + V EY L+ I
Sbjct: 36 IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV 95
Query: 396 DRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR 455
RDK + E R Q++ + + HRH HRD+KPENLL VKIADFGL+ +
Sbjct: 96 QRDK-MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 154
Query: 456 SRPYT------------DYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQF 492
+ + +S + Y PEV + S + L R F
Sbjct: 155 DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 203
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKL------KEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
LK ++H N++ L ++ + E +Y V E M NL Q+I L + ++Y
Sbjct: 75 LKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LDHERMSYLLY 131
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSR-PYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR + T YV TR+YRA
Sbjct: 132 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRA 191
Query: 471 PEVLL 475
PEV+L
Sbjct: 192 PEVIL 196
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKL------KEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L ++ + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 471 PEVLL 475
PEV+L
Sbjct: 194 PEVIL 198
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 15/169 (8%)
Query: 338 ILSRHVSSRDEMVVCFYRK--SLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIR 395
I+++ V ++ +M R+ L+ L H +++KL +VI+ D + V EY L+ I
Sbjct: 40 IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV 99
Query: 396 DRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR 455
RDK + E R Q++ + + HRH HRD+KPENLL VKIADFGL+ +
Sbjct: 100 QRDK-MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 158
Query: 456 SRPYT------------DYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQF 492
+ + +S + Y PEV + S + L R F
Sbjct: 159 DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 207
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKL------KEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L ++ + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 76 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLY 132
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 133 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 192
Query: 471 PEVLL 475
PEV+L
Sbjct: 193 PEVIL 197
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKL------KEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L ++ + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLY 134
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 194
Query: 471 PEVLL 475
PEV+L
Sbjct: 195 PEVIL 199
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 15/169 (8%)
Query: 338 ILSRHVSSRDEMVVCFYRK--SLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIR 395
I+++ V ++ +M R+ L+ L H +++KL +VI+ D + V EY L+ I
Sbjct: 45 IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV 104
Query: 396 DRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR 455
RDK + E R Q++ + + HRH HRD+KPENLL VKIADFGL+ +
Sbjct: 105 QRDK-MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163
Query: 456 SRPYT------------DYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQF 492
+ + +S + Y PEV + S + L R F
Sbjct: 164 DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 212
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKL------KEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L ++ + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 471 PEVLL 475
PEV+L
Sbjct: 194 PEVIL 198
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 15/169 (8%)
Query: 338 ILSRHVSSRDEMVVCFYRK--SLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIR 395
I+++ V ++ +M R+ L+ L H +++KL +VI+ D + V EY L+ I
Sbjct: 46 IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV 105
Query: 396 DRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR 455
RDK + E R Q++ + + HRH HRD+KPENLL VKIADFGL+ +
Sbjct: 106 QRDK-MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 164
Query: 456 SRPYT------------DYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQF 492
+ + +S + Y PEV + S + L R F
Sbjct: 165 DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 213
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKL------KEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L ++ + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLY 134
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 194
Query: 471 PEVLL 475
PEV+L
Sbjct: 195 PEVIL 199
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKL------KEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L ++ + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLY 127
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 187
Query: 471 PEVLL 475
PEV+L
Sbjct: 188 PEVIL 192
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKL------KEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L ++ + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLY 126
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 186
Query: 471 PEVLL 475
PEV+L
Sbjct: 187 PEVIL 191
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKL------KEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L ++ + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLY 127
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 187
Query: 471 PEVLL 475
PEV+L
Sbjct: 188 PEVIL 192
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 10/173 (5%)
Query: 338 ILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRD 396
I ++ +S+RD + + + L H N+V+L + I E Y VF+ + L++ I
Sbjct: 64 INTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA 123
Query: 397 RDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLL----CMGTELVKIADFGLAR 452
R+ + E+ + ++Q+L+ + +H+H HRD+KPENLL C G VK+ADFGLA
Sbjct: 124 RE-YYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAA-VKLADFGLAI 181
Query: 453 EIRS--RPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
E++ + + + T Y +PEV L Y P+ + L+ + PP
Sbjct: 182 EVQGEQQAWFGFAGTPGYLSPEV-LRKDPYGKPVDIWACGVILYILLVGYPPF 233
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 781 SPDAIHLMESMLAYNPSKRPTAQQSLSIKREVSLSFV--LLKKLNRLEKYRLKNARETLQ 838
+P+A +L+ ML NP+KR TA Q+L S V ++ + +E R NAR L+
Sbjct: 261 TPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLK 320
Query: 839 A 839
Sbjct: 321 G 321
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 118/271 (43%), Gaps = 39/271 (14%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFE-YMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK+L H N++KL E + Y V E Y L+ I R +F R ++ QVL G
Sbjct: 104 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-IIRQVLSG 162
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL---VKIADFGLAREIR-SRPYTDYVSTRWYRAPE 472
+ +MH++ HRD+KPENLL ++I DFGL+ S+ D + T +Y APE
Sbjct: 163 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 222
Query: 473 VLLHSTAYSAPIHLSRSQQFLFYSIDHVPPIQTTCLLAGTERLKSSYILLHTL--PLYTY 530
V LH T Y + + L+ + PP + Y +L + YT+
Sbjct: 223 V-LHGT-YDEKCDVWSTGVILYILLSGCPPFNGA----------NEYDILKKVEKGKYTF 270
Query: 531 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLLAGTERLKSSYILLHTLP 590
+P + +S+ L+ + Y VP ++ ++ + L +I +T
Sbjct: 271 ELPQWKKVS--------ESAKDLIRKMLTY---VPSMR----ISARDALDHEWIQTYTKE 315
Query: 591 LYTYHVPPIQTTCL----LAGTERLKSSYIL 617
+ VP + L GT++L + +L
Sbjct: 316 QISVDVPSLDNAILNIRQFQGTQKLAQAALL 346
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 118/271 (43%), Gaps = 39/271 (14%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFE-YMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK+L H N++KL E + Y V E Y L+ I R +F R ++ QVL G
Sbjct: 103 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-IIRQVLSG 161
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL---VKIADFGLAREIR-SRPYTDYVSTRWYRAPE 472
+ +MH++ HRD+KPENLL ++I DFGL+ S+ D + T +Y APE
Sbjct: 162 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 221
Query: 473 VLLHSTAYSAPIHLSRSQQFLFYSIDHVPPIQTTCLLAGTERLKSSYILLHTL--PLYTY 530
V LH T Y + + L+ + PP + Y +L + YT+
Sbjct: 222 V-LHGT-YDEKCDVWSTGVILYILLSGCPPFNGA----------NEYDILKKVEKGKYTF 269
Query: 531 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLLAGTERLKSSYILLHTLP 590
+P + +S+ L+ + Y VP ++ ++ + L +I +T
Sbjct: 270 ELPQWKKVS--------ESAKDLIRKMLTY---VPSMR----ISARDALDHEWIQTYTKE 314
Query: 591 LYTYHVPPIQTTCL----LAGTERLKSSYIL 617
+ VP + L GT++L + +L
Sbjct: 315 QISVDVPSLDNAILNIRQFQGTQKLAQAALL 345
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 118/272 (43%), Gaps = 41/272 (15%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFE-YMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK+L H N++KL E + Y V E Y L+ I R +F R ++ QVL G
Sbjct: 80 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-IIRQVLSG 138
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL---VKIADFGLAREIR-SRPYTDYVSTRWYRAPE 472
+ +MH++ HRD+KPENLL ++I DFGL+ S+ D + T +Y APE
Sbjct: 139 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 198
Query: 473 VLLHSTAYSAPIHLSRSQQFLFYSIDHVPPIQTTC---LLAGTERLKSSYILLHTLPLYT 529
V LH T Y + + L+ + PP +L E+ K YT
Sbjct: 199 V-LHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGK-----------YT 245
Query: 530 YHVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLLAGTERLKSSYILLHTL 589
+ +P + +S+ L+ + Y VP ++ ++ + L +I +T
Sbjct: 246 FELPQWKKVS--------ESAKDLIRKMLTY---VPSMR----ISARDALDHEWIQTYTK 290
Query: 590 PLYTYHVPPIQTTCL----LAGTERLKSSYIL 617
+ VP + L GT++L + +L
Sbjct: 291 EQISVDVPSLDNAILNIRQFQGTQKLAQAALL 322
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L V + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 471 PEVLL 475
PEV+L
Sbjct: 194 PEVIL 198
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L V + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 71 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLY 127
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 187
Query: 471 PEVLL 475
PEV+L
Sbjct: 188 PEVIL 192
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L V + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 471 PEVLL 475
PEV+L
Sbjct: 194 PEVIL 198
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L V + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 82 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLY 138
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 139 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 198
Query: 471 PEVLL 475
PEV+L
Sbjct: 199 PEVIL 203
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L V + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 78 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLY 134
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 194
Query: 471 PEVLL 475
PEV+L
Sbjct: 195 PEVIL 199
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L V + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T YV TR+YRA
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 471 PEVLL 475
PEV+L
Sbjct: 194 PEVIL 198
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 63/134 (47%), Gaps = 25/134 (18%)
Query: 377 DTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLL 436
D LY V E +L +L + FL E I+ ++Y +L G F+H G HRD+KP N L
Sbjct: 103 DELYIVLEIADSDLKKLFK-TPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCL 161
Query: 437 CMGTELVKIADFGLAREIRS------------------------RPYTDYVSTRWYRAPE 472
VK+ DFGLAR I S + T +V TRWYRAPE
Sbjct: 162 LNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPE 221
Query: 473 VLLHSTAYSAPIHL 486
++L Y+ I +
Sbjct: 222 LILLQENYTKSIDI 235
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP + + P S D I+L+ESML +NP+KR T Q+L
Sbjct: 319 FPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALD 361
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/150 (34%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFE-YMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK+L H N++KL E + Y V E Y L+ I R +F R ++ QVL G
Sbjct: 86 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-IIRQVLSG 144
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL---VKIADFGLAREIR-SRPYTDYVSTRWYRAPE 472
+ +MH++ HRD+KPENLL ++I DFGL+ S+ D + T +Y APE
Sbjct: 145 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 204
Query: 473 VLLHSTAYSAPIHLSRSQQFLFYSIDHVPP 502
V LH T Y + + L+ + PP
Sbjct: 205 V-LHGT-YDEKCDVWSTGVILYILLSGCPP 232
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 63/137 (45%), Gaps = 28/137 (20%)
Query: 377 DTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLL 436
D LY V E +L +L + FL E ++ ++Y +L G F+H G HRD+KP N L
Sbjct: 105 DELYIVLEIADSDLKKLFK-TPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCL 163
Query: 437 CMGTELVKIADFGLAREIRS---------------------------RPYTDYVSTRWYR 469
VKI DFGLAR I S + T +V TRWYR
Sbjct: 164 LNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYR 223
Query: 470 APEVLLHSTAYSAPIHL 486
APE++L Y+ I +
Sbjct: 224 APELILLQENYTNSIDI 240
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 35/163 (21%)
Query: 358 LKKLSHANLVKLKEVI-----RENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQ 412
L +L+H ++VK+ +++ + D LY V E + +L R +L E I+ ++Y
Sbjct: 106 LNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFR-TPVYLTELHIKTLLYN 164
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR----------------- 455
+L G+ ++H G HRD+KP N L VK+ DFGLAR +
Sbjct: 165 LLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 456 ------------SRPYTDYVSTRWYRAPEVLLHSTAYSAPIHL 486
R T +V TRWYRAPE++L Y+ I +
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDV 267
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS--IKREVSLSFVLLKKL 822
FP+ P +S DAIHL++ ML +NP+KR T + L+ +EV ++ V +
Sbjct: 354 FPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEV---ET 410
Query: 823 NRLEKYRL 830
N EK RL
Sbjct: 411 NATEKVRL 418
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 71/117 (60%), Gaps = 5/117 (4%)
Query: 375 ENDTLYFVFEYMKENLYQLIRD---RDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMK 431
+N L + EY+ + L+++++ + +P ++I +YQ+ + + F+H G HRD+K
Sbjct: 109 QNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIK 168
Query: 432 PENLLCMGTE-LVKIADFGLARE-IRSRPYTDYVSTRWYRAPEVLLHSTAYSAPIHL 486
P+NLL + +K+ DFG A++ I S P + +R+YRAPE++L +T Y+ I L
Sbjct: 169 PQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDL 225
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVL 414
+++ KLSH LVK V + +Y V EY+ L +R K L S + M Y V
Sbjct: 55 QTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVC 114
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAP 471
+G+AF+ H F HRD+ N L VK++DFG+ R + Y V T++ + AP
Sbjct: 115 EGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAP 174
Query: 472 EVLLHSTAYSA 482
EV H YS+
Sbjct: 175 EV-FHYFKYSS 184
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L V + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 79 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLY 135
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S +V TR+YRA
Sbjct: 136 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRA 195
Query: 471 PEVLL 475
PEV+L
Sbjct: 196 PEVIL 200
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L V + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR S T V TR+YRA
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRA 193
Query: 471 PEVLL 475
PEV+L
Sbjct: 194 PEVIL 198
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFE-YMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK+L H N++KL E + Y V E Y L+ I R KF E +M QVL G
Sbjct: 75 LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKF-SEVDAAVIMKQVLSG 133
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIR-SRPYTDYVSTRWYRAPE 472
++H+H HRD+KPENLL L+KI DFGL+ + + T +Y APE
Sbjct: 134 TTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPE 193
Query: 473 VL 474
VL
Sbjct: 194 VL 195
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFE-YMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK+L H N++KL E + Y V E Y L+ I R KF E +M QVL G
Sbjct: 58 LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKF-SEVDAAVIMKQVLSG 116
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIR-SRPYTDYVSTRWYRAPE 472
++H+H HRD+KPENLL L+KI DFGL+ + + T +Y APE
Sbjct: 117 TTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPE 176
Query: 473 VL 474
VL
Sbjct: 177 VL 178
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLI--RDRDKFLPESIIRNMMYQV 413
LK L H N++K+ EV + +Y V E + E L +++ + R K L E + +M Q+
Sbjct: 74 LKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGT---ELVKIADFGLAREIRSRPY-TDYVSTRWYR 469
+ LA+ H H+D+KPEN+L T +KI DFGLA +S + T+ T Y
Sbjct: 134 MNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYM 193
Query: 470 APEVLLHSTAYSAPI 484
APEV + I
Sbjct: 194 APEVFKRDVTFKCDI 208
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFE-YMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK+L H N+ KL E + Y V E Y L+ I R +F R ++ QVL G
Sbjct: 80 LKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-IIRQVLSG 138
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL---VKIADFGLAREIR-SRPYTDYVSTRWYRAPE 472
+ + H++ HRD+KPENLL ++I DFGL+ S+ D + T +Y APE
Sbjct: 139 ITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPE 198
Query: 473 VLLHSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
V LH T Y + + L+ + PP
Sbjct: 199 V-LHGT-YDEKCDVWSTGVILYILLSGCPPF 227
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L V + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD-YVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR + + V TR+YRA
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRA 193
Query: 471 PEVLL 475
PEV+L
Sbjct: 194 PEVIL 198
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 358 LKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+K ++H N++ L V + E +Y V E M NL Q+I+ L + ++Y
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLY 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD-YVSTRWYRA 470
Q+L G+ +H G HRD+KP N++ +KI DFGLAR + + V TR+YRA
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRA 193
Query: 471 PEVLL 475
PEV+L
Sbjct: 194 PEVIL 198
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 8/172 (4%)
Query: 338 ILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRD 396
I ++ +S+RD + + + L H N+V+L + I E Y VF+ + L++ I
Sbjct: 37 INTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA 96
Query: 397 RDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLARE 453
R+ + E+ + + Q+L+ + H +G HRD+KPENLL VK+ADFGLA E
Sbjct: 97 RE-YYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE 155
Query: 454 IRS--RPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
++ + + + T Y +PEV L Y P+ + L+ + PP
Sbjct: 156 VQGDQQAWFGFAGTPGYLSPEV-LRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 8/172 (4%)
Query: 338 ILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRD 396
I ++ +S+RD + + + L H N+V+L + I E Y +F+ + L++ I
Sbjct: 55 INTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA 114
Query: 397 RDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLC---MGTELVKIADFGLARE 453
R+ + E+ + + Q+L+ + H+ G HRD+KPENLL + VK+ADFGLA E
Sbjct: 115 RE-YYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIE 173
Query: 454 IRS--RPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
+ + + + T Y +PEV L Y P+ L L+ + PP
Sbjct: 174 VEGEQQAWFGFAGTPGYLSPEV-LRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 8/172 (4%)
Query: 338 ILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRD 396
I ++ +S+RD + + + L H N+V+L + I E Y VF+ + L++ I
Sbjct: 37 INTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA 96
Query: 397 RDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLARE 453
R+ + E+ + + Q+L+ + H +G HRD+KPENLL VK+ADFGLA E
Sbjct: 97 RE-YYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE 155
Query: 454 IRS--RPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
++ + + + T Y +PEV L Y P+ + L+ + PP
Sbjct: 156 VQGDQQAWFGFAGTPGYLSPEV-LRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFE-YMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK L H N++KL + + Y V E Y L+ I R KF E ++ QVL G
Sbjct: 90 LKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKF-NEVDAAVIIKQVLSG 148
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIRS-RPYTDYVSTRWYRAPE 472
+ ++H+H HRD+KPENLL E L+KI DFGL+ + + + + T +Y APE
Sbjct: 149 VTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPE 208
Query: 473 VL 474
VL
Sbjct: 209 VL 210
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 6/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM K +L ++ + K+L + +M Q+
Sbjct: 316 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 374
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + K+ADFGLAR I YT ++ + APE
Sbjct: 375 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 434
Query: 473 VLLHS 477
L+
Sbjct: 435 AALYG 439
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 6/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM K +L ++ + K+L + +M Q+
Sbjct: 233 MKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + K+ADFGLAR I YT ++ + APE
Sbjct: 292 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 473 VLLHS 477
L+
Sbjct: 352 AALYG 356
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 6/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM K +L ++ + K+L + +M Q+
Sbjct: 233 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + K+ADFGLAR I YT ++ + APE
Sbjct: 292 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 473 VLLHS 477
L+
Sbjct: 352 AALYG 356
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 6/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM K +L ++ + K+L + +M Q+
Sbjct: 233 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + K+ADFGLAR I YT ++ + APE
Sbjct: 292 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 473 VLLHS 477
L+
Sbjct: 352 AALYG 356
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
L+KL H N ++ + T + V EY + L+ K L E I + + LQGL
Sbjct: 108 LQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLL 475
A++H H HRD+K N+L LVK+ DFG A + P +V T ++ APEV+L
Sbjct: 168 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM--APANXFVGTPYWMAPEVIL 223
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
L+KL H N ++ + T + V EY + L+ K L E I + + LQGL
Sbjct: 69 LQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 128
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLL 475
A++H H HRD+K N+L LVK+ DFG A + P +V T ++ APEV+L
Sbjct: 129 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM--APANXFVGTPYWMAPEVIL 184
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM K +L ++ + K+L + +M Q+
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + K+ADFGLAR I YT ++ + APE
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 473 VLLH 476
L+
Sbjct: 186 AALY 189
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 8/172 (4%)
Query: 338 ILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRD 396
I ++ +S+RD + + + L H N+V+L + I E Y +F+ + L++ I
Sbjct: 44 INTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA 103
Query: 397 RDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLC---MGTELVKIADFGLARE 453
R+ + E+ + + Q+L+ + H+ G HR++KPENLL + VK+ADFGLA E
Sbjct: 104 RE-YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162
Query: 454 IRS--RPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
+ + + + T Y +PEV L Y P+ L L+ + PP
Sbjct: 163 VEGEQQAWFGFAGTPGYLSPEV-LRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 14/221 (6%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
K L + ++V ++D +Y V E + + R K + E R M Q +QG+
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 156
Query: 419 FMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR--SRPYTDYVSTRWYRAPEVLLH 476
++H + HRD+K NL VKI DFGLA +I D T Y APEVL
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC- 215
Query: 477 STAYSAPIHLSRSQQFLFYSIDHVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQ 536
+S + + L+ + PP +T+CL R+K + +++P H+ P+
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNE---YSVP---RHINPVA 269
Query: 537 TTC---LLAGTERLKSSYILLHTLPLYTYHVPPIQ--TTCL 572
+ +L L+ S L T +T P++ T+CL
Sbjct: 270 SALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCL 310
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 14/221 (6%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
K L + ++V ++D +Y V E + + R K + E R M Q +QG+
Sbjct: 81 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 140
Query: 419 FMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR--SRPYTDYVSTRWYRAPEVLLH 476
++H + HRD+K NL VKI DFGLA +I D T Y APEVL
Sbjct: 141 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC- 199
Query: 477 STAYSAPIHLSRSQQFLFYSIDHVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQ 536
+S + + L+ + PP +T+CL R+K + +++P H+ P+
Sbjct: 200 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNE---YSVP---RHINPVA 253
Query: 537 TTC---LLAGTERLKSSYILLHTLPLYTYHVPPIQ--TTCL 572
+ +L L+ S L T +T P++ T+CL
Sbjct: 254 SALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCL 294
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM K +L ++ + K+L + +M Q+
Sbjct: 234 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 292
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + K+ADFGL R I YT ++ + APE
Sbjct: 293 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPE 352
Query: 473 VLLHS 477
L+
Sbjct: 353 AALYG 357
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM K +L ++ + K+L + +M Q+
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + K+ADFGLAR I YT ++ + APE
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 473 VLLH 476
L+
Sbjct: 186 AALY 189
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
Query: 342 HVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFL 401
H + +E+ + + + K + N++ + E + + FE + NLY+LI+ ++KF
Sbjct: 137 HRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIK-KNKFQ 195
Query: 402 PESI--IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLC--MGTELVKIADFGLAREIRSR 457
S+ +R + +LQ L +H++ H D+KPEN+L G +K+ DFG + R
Sbjct: 196 GFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR 255
Query: 458 PYTDYVSTRWYRAPEVLLHSTAYSAPIHL 486
YT + +R+YRAPEV+L Y PI +
Sbjct: 256 VYT-XIQSRFYRAPEVIL-GARYGMPIDM 282
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 9/124 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDK---FLPESIIRNMMYQV 413
+K L H LV+L V+ + +Y + EYM K +L ++ + LP+ I + Q+
Sbjct: 62 MKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLI--DFSAQI 119
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRA 470
+G+A++ R + HRD++ N+L + + KIADFGLAR I YT ++ + A
Sbjct: 120 AEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA 179
Query: 471 PEVL 474
PE +
Sbjct: 180 PEAI 183
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN--LYQLIRDRDKFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM + L L + K+L + +M Q+
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + K+ADFGLAR I YT ++ + APE
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 473 VLLH 476
L+
Sbjct: 186 AALY 189
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD-KFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM K +L ++D + + L + +M QV
Sbjct: 58 MKKLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAA 116
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + KIADFGLAR I T ++ + APE
Sbjct: 117 GMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPE 176
Query: 473 VLLHS 477
L+
Sbjct: 177 AALYG 181
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM K +L ++ + K+L + +M Q+
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + K+ADFGLAR I YT ++ + APE
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 473 VLLH 476
L+
Sbjct: 186 AALY 189
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
Query: 342 HVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFL 401
H + +E+ + + + K + N++ + E + + FE + NLY+LI+ ++KF
Sbjct: 137 HRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIK-KNKFQ 195
Query: 402 PESI--IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLC--MGTELVKIADFGLAREIRSR 457
S+ +R + +LQ L +H++ H D+KPEN+L G +K+ DFG + R
Sbjct: 196 GFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR 255
Query: 458 PYTDYVSTRWYRAPEVLLHSTAYSAPIHL 486
YT + +R+YRAPEV+L Y PI +
Sbjct: 256 VYT-XIQSRFYRAPEVIL-GARYGMPIDM 282
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 118
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 474 LLHSTAYSAPI 484
L ++ P+
Sbjct: 179 LKRREFHAEPV 189
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 118
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 474 LLHSTAYSAPI 484
L ++ P+
Sbjct: 179 LKRREFHAEPV 189
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 118
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 474 LLHSTAYSAPI 484
L ++ P+
Sbjct: 179 LKRREFHAEPV 189
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM K +L ++ + K+L + +M Q+
Sbjct: 58 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 116
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + K+ADFGLAR I YT ++ + APE
Sbjct: 117 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 176
Query: 473 VLLH 476
L+
Sbjct: 177 AALY 180
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 117
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 474 LLHSTAYSAPI 484
L ++ P+
Sbjct: 178 LKRREFHAEPV 188
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM K +L ++ + K+L + +M Q+
Sbjct: 60 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 118
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + K+ADFGLAR I YT ++ + APE
Sbjct: 119 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 178
Query: 473 VLLH 476
L+
Sbjct: 179 AALY 182
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM K +L ++ + K+L + +M Q+
Sbjct: 56 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 114
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + K+ADFGLAR I YT ++ + APE
Sbjct: 115 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 174
Query: 473 VLLH 476
L+
Sbjct: 175 AALY 178
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM K +L ++ + K+L + +M Q+
Sbjct: 64 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIAS 122
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + K+ADFGLAR I YT ++ + APE
Sbjct: 123 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 182
Query: 473 VLLH 476
L+
Sbjct: 183 AALY 186
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 117
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 474 LLHSTAYSAPI 484
L ++ P+
Sbjct: 178 LKRREFHAEPV 188
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 117
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 474 LLHSTAYSAPIHL 486
L ++ P+ +
Sbjct: 178 LKRREFHAEPVDV 190
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 117
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 474 LLHSTAYSAPI 484
L ++ P+
Sbjct: 178 LKRREFHAEPV 188
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 118
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 474 LLHSTAYSAPIHL 486
L ++ P+ +
Sbjct: 179 LKRREFHAEPVDV 191
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 118
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 474 LLHSTAYSAPI 484
L ++ P+
Sbjct: 179 LKRREFHAEPV 189
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 117
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 474 LLHSTAYSAPI 484
L ++ P+
Sbjct: 178 LKRREFHAEPV 188
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 117
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 474 LLHSTAYSAPI 484
L ++ P+
Sbjct: 178 LKRREFHAEPV 188
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 118
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 474 LLHSTAYSAPI 484
L ++ P+
Sbjct: 179 LKRREFHAEPV 189
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 117
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 474 LLHSTAYSAPI 484
L ++ P+
Sbjct: 178 LKRREFHAEPV 188
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 117
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 474 LLHSTAYSAPI 484
L ++ P+
Sbjct: 178 LKRREFHAEPV 188
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 117
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 474 LLHSTAYSAPI 484
L ++ P+
Sbjct: 178 LKRREFHAEPV 188
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 58 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 116
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 117 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
Query: 474 LLHSTAYSAPI 484
L ++ P+
Sbjct: 177 LKRREFHAEPV 187
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 117
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 474 LLHSTAYSAPI 484
L ++ P+
Sbjct: 178 LKRREFHAEPV 188
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 118
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 178
Query: 474 LLHSTAYSAPI 484
L ++ P+
Sbjct: 179 LKRREFHAEPV 189
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 19/128 (14%)
Query: 358 LKKLSHANLVKLKEVIRE--NDTLYFVFEYMKEN-------LYQLIRDRDKFLPESIIRN 408
LKKL H N+VKL EV+ + D LY VFE + + L L D+ +F + +I+
Sbjct: 90 LKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIK- 148
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRP--YTDYVSTR 466
G+ ++H HRD+KP NLL +KIADFG++ E + ++ V T
Sbjct: 149 -------GIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTP 201
Query: 467 WYRAPEVL 474
+ APE L
Sbjct: 202 AFMAPESL 209
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 57 REVKSLKKLSHANLVKLKEVILDPP---LHAYFQV--GGPTTRVTSLK 99
+E+ LKKL H N+VKL EV+ DP L+ F++ GP V +LK
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK 132
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 117
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 474 LLHSTAYSAPI 484
L ++ P+
Sbjct: 178 LKRREFHAEPV 188
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
K L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGV 117
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEV 473
++H G HRD+KPENLL + +KI+DFGLA R R T Y APE+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 474 LLHSTAYSAPI 484
L ++ P+
Sbjct: 178 LKRREFHAEPV 188
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+KK+ H LV+L V+ E + +Y V EYM K +L ++ + K+L + +M Q+
Sbjct: 67 MKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + K+ADFGLAR I YT ++ + APE
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 473 VLLH 476
L+
Sbjct: 186 AALY 189
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN--LYQLIRDRDKFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM + L L + K+L + +M Q+
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + K+ADFGLAR I YT ++ + APE
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 473 VLLH 476
L+
Sbjct: 186 AALY 189
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 9/124 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDK---FLPESIIRNMMYQV 413
+K L H LV+L V+ + + +Y + E+M K +L ++ + LP+ I + Q+
Sbjct: 61 MKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLI--DFSAQI 118
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRA 470
+G+A++ R + HRD++ N+L + + KIADFGLAR I YT ++ + A
Sbjct: 119 AEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA 178
Query: 471 PEVL 474
PE +
Sbjct: 179 PEAI 182
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM K +L ++ + K+L + +M Q+
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD+ N+L + K+ADFGLAR I YT ++ + APE
Sbjct: 126 GMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 473 VLLH 476
L+
Sbjct: 186 AALY 189
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L+H N+VK RE + Y EY L+ I + D +PE + +Q++ G+ +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI----RSRPYTDYVSTRWYRAPEVLL 475
+H G HRD+KPENLL + +KI+DFGLA R R T Y APE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 476 HSTAYSAPI 484
++ P+
Sbjct: 181 RREFHAEPV 189
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 68 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIG 127
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 128 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 187 KQARANSFVGTAQYVSPELLTEKSA 211
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 69 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 128
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 129 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 187
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 188 KQARANSFVGTAQYVSPELLTEKSA 212
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVL 414
++LK H +++KL +VI ++ V EY+ L+ I ++ L E R + Q+L
Sbjct: 68 QNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYIC-KNGRLDEKESRRLFQQIL 126
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT------------DY 462
G+ + HRH HRD+KPEN+L KIADFGL+ + + +
Sbjct: 127 SGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEV 186
Query: 463 VSTRWYRAPEVLLHSTA 479
+S R Y PEV + S+
Sbjct: 187 ISGRLYAGPEVDIWSSG 203
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 72/165 (43%), Gaps = 24/165 (14%)
Query: 339 LSRHVSSRDEMVVCFYRKS----------------LKKLSHANLVKLKEVIRENDTLYFV 382
L+RHV + E+ V K+ +K L+H N+VKL EVI TLY V
Sbjct: 33 LARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLV 92
Query: 383 FEYMKENL---YQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG 439
EY Y + R + E R Q++ + + H+ HRD+K ENLL G
Sbjct: 93 MEYASGGEVFDYLVAHGR---MKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDG 149
Query: 440 TELVKIADFGLAREIRSRPYTD-YVSTRWYRAPEVLLHSTAYSAP 483
+KIADFG + E D + + Y APE L Y P
Sbjct: 150 DMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPE-LFQGKKYDGP 193
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM K +L ++ + K+L + +M Q+
Sbjct: 64 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIAS 122
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + K+ADFGLAR I +T ++ + APE
Sbjct: 123 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPE 182
Query: 473 VLLH 476
L+
Sbjct: 183 AALY 186
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 342 HVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFL 401
H + +E+ + + + K + N++ + E + + FE + NLY+LI+ ++KF
Sbjct: 137 HRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIK-KNKFQ 195
Query: 402 PESI--IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLC--MGTELVKIADFGLAREIRSR 457
S+ +R + +LQ L +H++ H D+KPEN+L G +K+ DFG + R
Sbjct: 196 GFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR 255
Query: 458 PYTDYVSTRWYRAPEVLLHSTAYSAPIHL 486
Y + +R+YRAPEV+L Y PI +
Sbjct: 256 VYX-XIQSRFYRAPEVIL-GARYGMPIDM 282
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 71 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 130
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 131 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 189
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 190 KQARANXFVGTAQYVSPELLTEKSA 214
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 69 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 128
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 129 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 187
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 188 KQARANXFVGTAQYVSPELLTEKSA 212
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 68 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 127
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 128 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSA 211
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 66.2 bits (160), Expect = 8e-11, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM K +L ++ + K+L + +M Q+
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + K+ADFGLAR I T ++ + APE
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE 185
Query: 473 VLLH 476
L+
Sbjct: 186 AALY 189
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 68 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 127
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 128 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSA 211
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 66 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 125
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 126 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSA 209
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Query: 339 LSRHVSSRDEMVVCFYRK--SLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRD 396
+SR + + +M + R+ LK L H +++KL +VI + V EY L+ I +
Sbjct: 42 ISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVE 101
Query: 397 RDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS 456
+ K + E R Q++ + + HRH HRD+KPENLL VKIADFGL+ +
Sbjct: 102 K-KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160
Query: 457 RPY-TDYVSTRWYRAPEVLLHSTAYSAP 483
+ + Y APEV ++ Y+ P
Sbjct: 161 GNFLKTSCGSPNYAAPEV-INGKLYAGP 187
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 66 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 125
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 126 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSA 209
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 68 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 127
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 128 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSA 211
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 68 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 127
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 128 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSA 211
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 68 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 127
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 128 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSA 211
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 66 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 125
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 126 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 185 KQARANAFVGTAQYVSPELLTEKSA 209
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 14/221 (6%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
K L + ++V ++D +Y V E + + R K + E R M Q +QG+
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 156
Query: 419 FMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR--SRPYTDYVSTRWYRAPEVLLH 476
++H + HRD+K NL VKI DFGLA +I T Y APEVL
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLC- 215
Query: 477 STAYSAPIHLSRSQQFLFYSIDHVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQ 536
+S + + L+ + PP +T+CL R+K + +++P H+ P+
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNE---YSVP---RHINPVA 269
Query: 537 TTC---LLAGTERLKSSYILLHTLPLYTYHVPPIQ--TTCL 572
+ +L L+ S L T +T P++ T+CL
Sbjct: 270 SALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCL 310
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 66 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 125
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 126 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSA 209
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 99/222 (44%), Gaps = 16/222 (7%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
K L + ++V ++D +Y V E + + R K + E R M Q +QG+
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 156
Query: 419 FMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR---SRPYTDYVSTRWYRAPEVLL 475
++H + HRD+K NL VKI DFGLA +I R T T Y APEVL
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEVLC 215
Query: 476 HSTAYSAPIHLSRSQQFLFYSIDHVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPI 535
+S + + L+ + PP +T+CL R+K + +++P H+ P+
Sbjct: 216 -KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNE---YSVP---RHINPV 268
Query: 536 QTTC---LLAGTERLKSSYILLHTLPLYTYHVPPIQ--TTCL 572
+ +L L+ S L T +T P++ T+CL
Sbjct: 269 ASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCL 310
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 46 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 105
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 106 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 164
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 165 KQARANXFVGTAQYVSPELLTEKSA 189
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 73 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIG 132
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 133 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 191
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 192 KQARANXFVGTAQYVSPELLTEKSA 216
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 65 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 124
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 125 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 183
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 184 KQARANSFVGTAQYVSPELLTEKSA 208
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 50 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 109
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 110 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 168
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 169 KQARANXFVGTAQYVSPELLTEKSA 193
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 45 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 104
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 105 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 163
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 164 KQARANXFVGTAQYVSPELLTEKSA 188
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 26/164 (15%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
L +LSH N++KLKE+ + V E + L+ I ++ + E + + Q+L+
Sbjct: 102 LLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG-YYSERDAADAVKQILEA 160
Query: 417 LAFMHRHGFFHRDMKPENLLCMG---TELVKIADFGLAREIRSRPYTDYV-STRWYRAPE 472
+A++H +G HRD+KPENLL +KIADFGL++ + + V T Y APE
Sbjct: 161 VAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPE 220
Query: 473 VLLHSTAYS-------------------APIHLSRSQQFLFYSI 497
+ L AY P + R QF+F I
Sbjct: 221 I-LRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRI 263
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 43 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 102
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 103 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 161
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 162 KQARANXFVGTAQYVSPELLTEKSA 186
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 44 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 103
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 104 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 162
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 163 KQARANXFVGTAQYVSPELLTEKSA 187
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 341 RHVSSRDEM-VVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRD 398
RH+ +++ V R + +L H VKL ++++ LYF Y K L + IR
Sbjct: 65 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 124
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR----EI 454
F E+ R +++ L ++H G HRD+KPEN+L ++I DFG A+ E
Sbjct: 125 SF-DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 183
Query: 455 RSRPYTDYVSTRWYRAPEVLLHSTA 479
+ +V T Y +PE+L +A
Sbjct: 184 KQARANXFVGTAQYVSPELLTEKSA 208
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LKKL+H ++K+K D Y V E M+ L+ + +K L E+ + YQ+L
Sbjct: 75 LKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLA 132
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREI-RSRPYTDYVSTRWYRAPE 472
+ ++H +G HRD+KPEN+L E L+KI DFG ++ + + T Y APE
Sbjct: 133 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 192
Query: 473 VL--LHSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
VL + + Y+ + LF + PP
Sbjct: 193 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ +L HANL++L + + + V EY+ L+ I D L E M Q+ +G
Sbjct: 140 MNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEG 199
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL--VKIADFGLAREIRSRPYTDY-VSTRWYRAPEV 473
+ MH+ H D+KPEN+LC+ + +KI DFGLAR + R T + APEV
Sbjct: 200 IRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEV 259
Query: 474 L 474
+
Sbjct: 260 V 260
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LKKL+H ++K+K D Y V E M+ L+ + +K L E+ + YQ+L
Sbjct: 68 LKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLA 125
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREI-RSRPYTDYVSTRWYRAPE 472
+ ++H +G HRD+KPEN+L E L+KI DFG ++ + + T Y APE
Sbjct: 126 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 185
Query: 473 VL--LHSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
VL + + Y+ + LF + PP
Sbjct: 186 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LKKL+H ++K+K D Y V E M+ L+ + +K L E+ + YQ+L
Sbjct: 69 LKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLA 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREI-RSRPYTDYVSTRWYRAPE 472
+ ++H +G HRD+KPEN+L E L+KI DFG ++ + + T Y APE
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 186
Query: 473 VL--LHSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
VL + + Y+ + LF + PP
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LKKL+H ++K+K D Y V E M+ L+ + +K L E+ + YQ+L
Sbjct: 69 LKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLA 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREI-RSRPYTDYVSTRWYRAPE 472
+ ++H +G HRD+KPEN+L E L+KI DFG ++ + + T Y APE
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 186
Query: 473 VL--LHSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
VL + + Y+ + LF + PP
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LKKL+H ++K+K D Y V E M+ L+ + +K L E+ + YQ+L
Sbjct: 69 LKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLA 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREI-RSRPYTDYVSTRWYRAPE 472
+ ++H +G HRD+KPEN+L E L+KI DFG ++ + + T Y APE
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 186
Query: 473 VL--LHSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
VL + + Y+ + LF + PP
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+K L H LVKL V+ + + +Y + E+M K +L ++ D P + + Q+ +
Sbjct: 64 MKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAE 122
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+AF+ + + HRD++ N+L + + KIADFGLAR I YT ++ + APE
Sbjct: 123 GMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 182
Query: 473 VL 474
+
Sbjct: 183 AI 184
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+K L H LVKL V+ + + +Y + E+M K +L ++ D P + + Q+ +
Sbjct: 237 MKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAE 295
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+AF+ + + HRD++ N+L + + KIADFGLAR I YT ++ + APE
Sbjct: 296 GMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 355
Query: 473 VL 474
+
Sbjct: 356 AI 357
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENL---YQLIRDRDKFLPESIIRNMMYQVL 414
+K L+H N+VKL EVI TLY + EY Y + R + E R+ Q++
Sbjct: 65 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR---MKEKEARSKFRQIV 121
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD-YVSTRWYRAPEV 473
+ + H+ HRD+K ENLL +KIADFG + E D + + Y APE
Sbjct: 122 SAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPE- 180
Query: 474 LLHSTAYSAP 483
L Y P
Sbjct: 181 LFQGKKYDGP 190
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVL 414
++LK H +++KL +VI + V EY+ L+ I + + E R + Q+L
Sbjct: 63 QNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQIL 121
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-TDYVSTRWYRAPEV 473
+ + HRH HRD+KPEN+L KIADFGL+ + + D + Y APEV
Sbjct: 122 SAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEV 181
Query: 474 LLHSTAYSAP 483
+ Y+ P
Sbjct: 182 -ISGRLYAGP 190
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 7/183 (3%)
Query: 338 ILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDR 397
+L H + M + +R L+H ++V +ND ++ V E + + R
Sbjct: 79 LLKPHQREKMSMEISIHRS----LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR 134
Query: 398 DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSR 457
K L E R + Q++ G ++HR+ HRD+K NL VKI DFGLA ++
Sbjct: 135 RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194
Query: 458 PYTDYV--STRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPIQTTCLLAGTERL 515
V T Y APEV L +S + + ++ + PP +T+CL R+
Sbjct: 195 GERKKVLCGTPNYIAPEV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 253
Query: 516 KSS 518
K +
Sbjct: 254 KKN 256
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 71/165 (43%), Gaps = 24/165 (14%)
Query: 339 LSRHVSSRDEMVVCFYRKS----------------LKKLSHANLVKLKEVIRENDTLYFV 382
L+RH+ + E+ V K+ +K L+H N+VKL EVI TLY V
Sbjct: 32 LARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLV 91
Query: 383 FEYMKENL---YQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG 439
EY Y + R + E R Q++ + + H+ HRD+K ENLL
Sbjct: 92 MEYASGGEVFDYLVAHGR---MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 440 TELVKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLHSTAYSAP 483
+KIADFG + E ++ + Y APE L Y P
Sbjct: 149 DMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPE-LFQGKKYDGP 192
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 7/183 (3%)
Query: 338 ILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDR 397
+L H + M + +R L+H ++V +ND ++ V E + + R
Sbjct: 77 LLKPHQREKMSMEISIHRS----LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR 132
Query: 398 DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSR 457
K L E R + Q++ G ++HR+ HRD+K NL VKI DFGLA ++
Sbjct: 133 RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 192
Query: 458 PYTDYV--STRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPIQTTCLLAGTERL 515
V T Y APEV L +S + + ++ + PP +T+CL R+
Sbjct: 193 GERKKVLCGTPNYIAPEV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 251
Query: 516 KSS 518
K +
Sbjct: 252 KKN 254
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
L+K+ H N+V L+++ + LY V + + L+ I ++ F E ++ QVL
Sbjct: 74 LRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKG-FYTEKDASTLIRQVLDA 132
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAR-EIRSRPYTDYVSTRWYRAPE 472
+ ++HR G HRD+KPENLL + + I+DFGL++ E + + T Y APE
Sbjct: 133 VYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPE 192
Query: 473 VL 474
VL
Sbjct: 193 VL 194
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKF-LPESIIRNMMYQVLQ 415
+K+L H LV+L V+ + + +Y + EYM+ L ++ L + + +M Q+ +
Sbjct: 68 MKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+AF+ + HRD++ N+L T KIADFGLAR I YT ++ + APE
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 186
Query: 473 VLLHST 478
+ + T
Sbjct: 187 AINYGT 192
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 71/165 (43%), Gaps = 24/165 (14%)
Query: 339 LSRHVSSRDEMVVCFYRKS----------------LKKLSHANLVKLKEVIRENDTLYFV 382
L+RH+ + E+ V K+ +K L+H N+VKL EVI TLY V
Sbjct: 32 LARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLV 91
Query: 383 FEYMKENL---YQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG 439
EY Y + R + E R Q++ + + H+ HRD+K ENLL
Sbjct: 92 MEYASGGEVFDYLVAHGR---MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 440 TELVKIADFGLAREIRSRPYTD-YVSTRWYRAPEVLLHSTAYSAP 483
+KIADFG + E D + + Y APE L Y P
Sbjct: 149 DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE-LFQGKKYDGP 192
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKF-LPESIIRNMMYQVLQ 415
+K+L H LV+L V+ + + +Y + EYM+ L ++ L + + +M Q+ +
Sbjct: 72 MKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 130
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+AF+ + HRD++ N+L T KIADFGLAR I YT ++ + APE
Sbjct: 131 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 190
Query: 473 VLLHST 478
+ + T
Sbjct: 191 AINYGT 196
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENL---YQLIRDRDKFLPESIIRNMMYQVL 414
+K L+H N+VKL EVI TLY + EY Y + R + E R+ Q++
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR---MKEKEARSKFRQIV 124
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD-YVSTRWYRAPEV 473
+ + H+ HRD+K ENLL +KIADFG + E D + Y APE
Sbjct: 125 SAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPE- 183
Query: 474 LLHSTAYSAP 483
L Y P
Sbjct: 184 LFQGKKYDGP 193
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 71/165 (43%), Gaps = 24/165 (14%)
Query: 339 LSRHVSSRDEMVVCFYRKS----------------LKKLSHANLVKLKEVIRENDTLYFV 382
L+RH+ + E+ V K+ +K L+H N+VKL EVI TLY V
Sbjct: 32 LARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLV 91
Query: 383 FEYMKENL---YQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG 439
EY Y + R + E R Q++ + + H+ HRD+K ENLL
Sbjct: 92 MEYASGGEVFDYLVAHGR---MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 440 TELVKIADFGLAREIRSRPYTD-YVSTRWYRAPEVLLHSTAYSAP 483
+KIADFG + E D + + Y APE L Y P
Sbjct: 149 DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE-LFQGKKYDGP 192
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKF-LPESIIRNMMYQVLQ 415
+K+L H LV+L V+ + + +Y + EYM+ L ++ L + + +M Q+ +
Sbjct: 67 MKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 125
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+AF+ + HRD++ N+L T KIADFGLAR I YT ++ + APE
Sbjct: 126 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 185
Query: 473 VLLHST 478
+ + T
Sbjct: 186 AINYGT 191
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EYM +++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +K+ADFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 339 LSRHVSSRDEMVVCFYRKS----------------LKKLSHANLVKLKEVIRENDTLYFV 382
L+RH+ + E+ V K+ +K L+H N+VKL EVI TLY V
Sbjct: 25 LARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLV 84
Query: 383 FEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTEL 442
EY ++ E R Q++ + + H+ HRD+K ENLL
Sbjct: 85 MEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN 144
Query: 443 VKIADFGLAREIRSRPYTD-YVSTRWYRAPEVLLHSTAYSAP 483
+KIADFG + E D + + Y APE L Y P
Sbjct: 145 IKIADFGFSNEFTFGNKLDTFCGSPPYAAPE-LFQGKKYDGP 185
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKF-LPESIIRNMMYQVLQ 415
+K+L H LV+L V+ + + +Y + EYM+ L ++ L + + +M Q+ +
Sbjct: 62 MKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+AF+ + HRD++ N+L T KIADFGLAR I YT ++ + APE
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 180
Query: 473 VLLHST 478
+ + T
Sbjct: 181 AINYGT 186
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EYM +++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +K+ADFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 3/162 (1%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
+ L+H ++V +ND ++ V E + + R K L E R + Q++ G
Sbjct: 70 RSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 129
Query: 419 FMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYV--STRWYRAPEVLLH 476
++HR+ HRD+K NL VKI DFGLA ++ V T Y APEV L
Sbjct: 130 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV-LS 188
Query: 477 STAYSAPIHLSRSQQFLFYSIDHVPPIQTTCLLAGTERLKSS 518
+S + + ++ + PP +T+CL R+K +
Sbjct: 189 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 230
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 338 ILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDR 397
+L H + M + +R L+H ++V +ND ++ V E + + R
Sbjct: 55 LLKPHQREKMSMEISIHRS----LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR 110
Query: 398 DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-- 455
K L E R + Q++ G ++HR+ HRD+K NL VKI DFGLA ++
Sbjct: 111 RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 170
Query: 456 SRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPIQTTCLLAGTERL 515
T Y APEV L +S + + ++ + PP +T+CL R+
Sbjct: 171 GERKKTLCGTPNYIAPEV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 229
Query: 516 KSS 518
K +
Sbjct: 230 KKN 232
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 338 ILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDR 397
+L H + M + +R L+H ++V +ND ++ V E + + R
Sbjct: 55 LLKPHQREKMSMEISIHRS----LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR 110
Query: 398 DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-- 455
K L E R + Q++ G ++HR+ HRD+K NL VKI DFGLA ++
Sbjct: 111 RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 170
Query: 456 SRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPIQTTCLLAGTERL 515
T Y APEV L +S + + ++ + PP +T+CL R+
Sbjct: 171 GERKKTLCGTPNYIAPEV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 229
Query: 516 KSS 518
K +
Sbjct: 230 KKN 232
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 338 ILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDR 397
+L H + M + +R L+H ++V +ND ++ V E + + R
Sbjct: 59 LLKPHQREKMSMEISIHRS----LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR 114
Query: 398 DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-- 455
K L E R + Q++ G ++HR+ HRD+K NL VKI DFGLA ++
Sbjct: 115 RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 174
Query: 456 SRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPIQTTCLLAGTERL 515
T Y APEV L +S + + ++ + PP +T+CL R+
Sbjct: 175 GERKKTLCGTPNYIAPEV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 233
Query: 516 KSS 518
K +
Sbjct: 234 KKN 236
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKF-LPESIIRNMMYQVLQ 415
+K+L H LV+L V+ + + +Y + EYM+ L ++ L + + +M Q+ +
Sbjct: 57 MKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 115
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+AF+ + HRD++ N+L T KIADFGLAR I YT ++ + APE
Sbjct: 116 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 175
Query: 473 VLLHST 478
+ + T
Sbjct: 176 AINYGT 181
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ KLSH LV+L V E + VFE+M+ L +R + + M V +G
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 115
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPEV 473
+A++ HRD+ N L +++K++DFG+ R + YT T++ + +PEV
Sbjct: 116 MAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 175
Query: 474 LLHS 477
S
Sbjct: 176 FSFS 179
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFL--PESIIRNMMYQVLQG 416
L H ++V+L E + LY VFE+M + +++++ D E++ + M Q+L+
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL---VKIADFGLAREIRSRPYT--DYVSTRWYRAP 471
L + H + HRD+KPEN+L E VK+ DFG+A ++ V T + AP
Sbjct: 143 LRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 472 EVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPIQTT 506
EV + Y P+ + LF + P T
Sbjct: 203 EV-VKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 71/165 (43%), Gaps = 24/165 (14%)
Query: 339 LSRHVSSRDEMVVCFYRKS----------------LKKLSHANLVKLKEVIRENDTLYFV 382
L+RH+ + E+ V K+ +K L+H N+VKL EVI TLY V
Sbjct: 32 LARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLV 91
Query: 383 FEYMKENL---YQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG 439
EY Y + R + E R Q++ + + H+ HRD+K ENLL
Sbjct: 92 MEYASGGEVFDYLVAHGR---MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 440 TELVKIADFGLAREIRSRPYTD-YVSTRWYRAPEVLLHSTAYSAP 483
+KIADFG + E D + + Y APE L Y P
Sbjct: 149 DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE-LFQGKKYDGP 192
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LKKL+H ++K+K D Y V E M+ L+ + +K L E+ + YQ+L
Sbjct: 208 LKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLA 265
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREI-RSRPYTDYVSTRWYRAPE 472
+ ++H +G HRD+KPEN+L E L+KI DFG ++ + + T Y APE
Sbjct: 266 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 325
Query: 473 VL--LHSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
VL + + Y+ + LF + PP
Sbjct: 326 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 71/165 (43%), Gaps = 24/165 (14%)
Query: 339 LSRHVSSRDEMVVCFYRK------SLKKL----------SHANLVKLKEVIRENDTLYFV 382
L+RH+ + E+ V K SL+KL +H N+VKL EVI TLY V
Sbjct: 32 LARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLV 91
Query: 383 FEYMKENL---YQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG 439
EY Y + R K E R Q++ + + H+ HRD+K ENLL
Sbjct: 92 XEYASGGEVFDYLVAHGRXK---EKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 440 TELVKIADFGLAREIRSRPYTD-YVSTRWYRAPEVLLHSTAYSAP 483
+KIADFG + E D + Y APE L Y P
Sbjct: 149 DXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPE-LFQGKKYDGP 192
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 70/165 (42%), Gaps = 24/165 (14%)
Query: 339 LSRHVSSRDEMVVCFYRKS----------------LKKLSHANLVKLKEVIRENDTLYFV 382
L+RH+ + E+ V K+ +K L+H N+VKL EVI TLY V
Sbjct: 32 LARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLV 91
Query: 383 FEYMKENL---YQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG 439
EY Y + R + E R Q++ + + H+ HRD+K ENLL
Sbjct: 92 MEYASGGEVFDYLVAHGR---MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 440 TELVKIADFGLAREIRSRPYTD-YVSTRWYRAPEVLLHSTAYSAP 483
+KIADFG + E D + Y APE L Y P
Sbjct: 149 DMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPE-LFQGKKYDGP 192
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LKKL+H ++K+K D Y V E M+ L+ + +K L E+ + YQ+L
Sbjct: 194 LKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLA 251
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREI-RSRPYTDYVSTRWYRAPE 472
+ ++H +G HRD+KPEN+L E L+KI DFG ++ + + T Y APE
Sbjct: 252 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 311
Query: 473 VL--LHSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
VL + + Y+ + LF + PP
Sbjct: 312 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRD-RDKFLPESIIRNMMYQV 413
K + LSH LV+L V + ++ + EYM L +R+ R +F + ++ M V
Sbjct: 62 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE-MCKDV 120
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRA 470
+ + ++ F HRD+ N L +VK++DFGL+R + YT V +++ +
Sbjct: 121 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 180
Query: 471 PEVLLHS 477
PEVL++S
Sbjct: 181 PEVLMYS 187
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Query: 358 LKKLSHANLVKLKEVI-RENDTLYFVFEYM-KENLYQLIRDRDK-FLPESIIRNMMYQVL 414
+ +L H+NLV+L VI E LY V EYM K +L +R R + L + V
Sbjct: 240 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 299
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
+ + ++ + F HRD+ N+L + K++DFGL +E S T + +W APE L
Sbjct: 300 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW-TAPEAL 358
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 5/118 (4%)
Query: 360 KLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
+L H ++++L +++ +Y V E + + +++R K E+ R+ M+Q++ G+
Sbjct: 67 QLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGML 126
Query: 419 FMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR---SRPYTDYVSTRWYRAPEV 473
++H HG HRD+ NLL +KIADFGLA +++ + YT T Y +PE+
Sbjct: 127 YLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEI 183
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ KLSH LV+L V E + VFE+M+ L +R + + M V +G
Sbjct: 59 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 118
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPEV 473
+A++ HRD+ N L +++K++DFG+ R + YT T++ + +PEV
Sbjct: 119 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 178
Query: 474 LLHS 477
S
Sbjct: 179 FSFS 182
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ KLSH LV+L V E + VFE+M+ L +R + + M V +G
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 115
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPEV 473
+A++ HRD+ N L +++K++DFG+ R + YT T++ + +PEV
Sbjct: 116 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 175
Query: 474 LLHS 477
S
Sbjct: 176 FSFS 179
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ KLSH LV+L V E + VFE+M+ L +R + + M V +G
Sbjct: 54 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 113
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPEV 473
+A++ HRD+ N L +++K++DFG+ R + YT T++ + +PEV
Sbjct: 114 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 173
Query: 474 LLHS 477
S
Sbjct: 174 FSFS 177
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRD-RDKFLPESIIRNMMYQV 413
K + LSH LV+L V + ++ + EYM L +R+ R +F + ++ M V
Sbjct: 56 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE-MCKDV 114
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRA 470
+ + ++ F HRD+ N L +VK++DFGL+R + YT V +++ +
Sbjct: 115 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 174
Query: 471 PEVLLHS 477
PEVL++S
Sbjct: 175 PEVLMYS 181
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ KLSH LV+L V E + VFE+M+ L +R + + M V +G
Sbjct: 76 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 135
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPEV 473
+A++ HRD+ N L +++K++DFG+ R + YT T++ + +PEV
Sbjct: 136 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 195
Query: 474 LLHS 477
S
Sbjct: 196 FSFS 199
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRD-RDKFLPESIIRNMMYQV 413
K + LSH LV+L V + ++ + EYM L +R+ R +F + ++ M V
Sbjct: 55 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE-MCKDV 113
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRA 470
+ + ++ F HRD+ N L +VK++DFGL+R + YT V +++ +
Sbjct: 114 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 173
Query: 471 PEVLLHS 477
PEVL++S
Sbjct: 174 PEVLMYS 180
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + + V EYM K +L ++ + K+L + +M Q+
Sbjct: 57 MKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 115
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+A++ R + HRD++ N+L + K+ADFGLAR I T ++ + APE
Sbjct: 116 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE 175
Query: 473 VLLH 476
L+
Sbjct: 176 AALY 179
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E M+ ++L+ I +R L E + R+ +QV
Sbjct: 65 LKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGA-LQEELARSFFWQV 123
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 183
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKF-LPESIIRNMMYQVLQ 415
+K+L H LV+L V+ + + +Y + EYM+ L ++ L + + +M Q+ +
Sbjct: 58 MKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+AF+ + HR+++ N+L T KIADFGLAR I YT ++ + APE
Sbjct: 117 GMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 176
Query: 473 VLLHST 478
+ + T
Sbjct: 177 AINYGT 182
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Query: 358 LKKLSHANLVKLKEVI-RENDTLYFVFEYM-KENLYQLIRDRDK-FLPESIIRNMMYQVL 414
+ +L H+NLV+L VI E LY V EYM K +L +R R + L + V
Sbjct: 59 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 118
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
+ + ++ + F HRD+ N+L + K++DFGL +E S T + +W APE L
Sbjct: 119 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW-TAPEAL 177
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Query: 358 LKKLSHANLVKLKEVI-RENDTLYFVFEYM-KENLYQLIRDRDK-FLPESIIRNMMYQVL 414
+ +L H+NLV+L VI E LY V EYM K +L +R R + L + V
Sbjct: 68 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 127
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
+ + ++ + F HRD+ N+L + K++DFGL +E S T + +W APE L
Sbjct: 128 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW-TAPEAL 186
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LKK+ H N+V L+++ Y V + + L+ I +R + E ++ QVL
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVY-TEKDASLVIQQVLSA 118
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +G HRD+KPENLL + E + I DFGL++ ++ + T Y APEV
Sbjct: 119 VKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEV 178
Query: 474 L 474
L
Sbjct: 179 L 179
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKF-LPESIIRNMMYQVLQ 415
+K++ H NLV+L V Y V EYM NL +R+ ++ + ++ M Q+
Sbjct: 82 MKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISS 141
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L +VK+ADFGL+R + YT + ++ + APE
Sbjct: 142 AMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 201
Query: 473 VLLHST 478
L ++T
Sbjct: 202 SLAYNT 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Query: 358 LKKLSHANLVKLKEVI-RENDTLYFVFEYM-KENLYQLIRDRDK-FLPESIIRNMMYQVL 414
+ +L H+NLV+L VI E LY V EYM K +L +R R + L + V
Sbjct: 53 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 112
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
+ + ++ + F HRD+ N+L + K++DFGL +E S T + +W APE L
Sbjct: 113 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW-TAPEAL 171
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 360 KLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
+LSH N+V + +V E+D Y V EY++ L + I ++ I N Q+L G+
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAI-NFTNQILDGIK 125
Query: 419 FMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD---YVSTRWYRAPE 472
H HRD+KP+N+L + +KI DFG+A+ + T + T Y +PE
Sbjct: 126 HAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE 182
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKF-LPESIIRNMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ + ++ M Q+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + YT + ++ + APE
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 473 VLLHS 477
L ++
Sbjct: 183 SLAYN 187
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIR---DRDKFLPESIIRNMMYQV 413
LK+L+H N++K E++ L V E +L ++I+ + + +PE + Q+
Sbjct: 86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY--VSTRWYRAP 471
L MH HRD+KP N+ T +VK+ D GL R S+ + V T +Y +P
Sbjct: 146 CSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 205
Query: 472 EVLLHSTAYS 481
E +H Y+
Sbjct: 206 E-RIHENGYN 214
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 356 KSLKKLSHANLVKLK-------EVIRENDTLYFVFEYMKENLYQLIRD---RDKFLPESI 405
+ L L H N+V+L+ E R + L V EY+ + L++ R+ R P +
Sbjct: 71 QDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPIL 130
Query: 406 IRNMMYQVLQGLAFMH--RHGFFHRDMKPENLLCMGTE-LVKIADFGLAREIR-SRPYTD 461
I+ ++Q+++ + +H HRD+KP N+L + +K+ DFG A+++ S P
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA 190
Query: 462 YVSTRWYRAPEVLLHSTAYSAPIHL 486
Y+ +R+YRAPE++ + Y+ + +
Sbjct: 191 YICSRYYRAPELIFGNQHYTTAVDI 215
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 14/137 (10%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVL 414
++LK H +++KL +VI + V EY+ L+ I + + E R + Q+L
Sbjct: 63 QNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQIL 121
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT------------DY 462
+ + HRH HRD+KPEN+L KIADFGL+ + + +
Sbjct: 122 SAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEV 181
Query: 463 VSTRWYRAPEVLLHSTA 479
+S R Y PEV + S
Sbjct: 182 ISGRLYAGPEVDIWSCG 198
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 376 NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFM-HRHGFFHRDMKPEN 434
+ + E+M + K +PE I+ + VL+GLA++ +H HRD+KP N
Sbjct: 86 DGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSN 145
Query: 435 LLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAYS 481
+L +K+ DFG++ ++ +V TR Y APE L T YS
Sbjct: 146 ILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPE-RLQGTHYS 191
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ +L H L+ L + + + + E++ L+ I D + E+ + N M Q +G
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG 161
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL--VKIADFGLAREIRSRPYTDY-VSTRWYRAPEV 473
L MH H H D+KPEN++C + VKI DFGLA ++ +T + APE+
Sbjct: 162 LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEI 221
Query: 474 L 474
+
Sbjct: 222 V 222
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +K+ADFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKF-LPESIIRNMMYQVLQ 415
+K+L H LV+L V+ + + +Y + EYM+ L ++ L + + +M Q+ +
Sbjct: 70 MKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 128
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+AF+ + HRD++ N+L T KIADFGLAR I T ++ + APE
Sbjct: 129 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 188
Query: 473 VLLHST 478
+ + T
Sbjct: 189 AINYGT 194
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 9/125 (7%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQVL 414
++LK L H ++ +L V+ + ++ V EY L+ I +D+ L E R + Q++
Sbjct: 60 EALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR-LSEEETRVVFRQIV 118
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY-----VSTRWYR 469
+A++H G+ HRD+KPENLL +K+ DFGL + + DY + Y
Sbjct: 119 SAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN--KDYHLQTCCGSLAYA 176
Query: 470 APEVL 474
APE++
Sbjct: 177 APELI 181
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKF-LPESIIRNMMYQVLQ 415
+K+L H LV+L V+ + + +Y + EYM+ L ++ L + + +M Q+ +
Sbjct: 68 MKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+AF+ + HRD++ N+L T KIADFGLAR I T ++ + APE
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 186
Query: 473 VLLHST 478
+ + T
Sbjct: 187 AINYGT 192
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKF-LPESIIRNMMYQVLQ 415
+K+L H LV+L V+ + + +Y + EYM+ L ++ L + + +M Q+ +
Sbjct: 62 MKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+AF+ + HRD++ N+L T KIADFGLAR I T ++ + APE
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 473 VLLHST 478
+ + T
Sbjct: 181 AINYGT 186
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 358 LKKLSHANLVKLKEVI--RENDTLYFVFEYMKE-NLYQLIRDRDK---FLPESIIRNMMY 411
L++L H N+V+ + I R N TLY V EY + +L +I K +L E + +M
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 412 QVLQGLAFMHR-----HGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRP--YTDYVS 464
Q+ L HR H HRD+KP N+ G + VK+ DFGLAR + ++V
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVG 178
Query: 465 TRWYRAPEVL 474
T +Y +PE +
Sbjct: 179 TPYYMSPEQM 188
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKF-LPESIIRNMMYQVLQ 415
+K+L H LV+L V+ + + +Y + EYM+ +L ++ L + + +M Q+ +
Sbjct: 71 MKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 129
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+AF+ + HRD++ N+L T KIADFGLAR I T ++ + APE
Sbjct: 130 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 189
Query: 473 VLLHST 478
+ + T
Sbjct: 190 AINYGT 195
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKF-LPESIIRNMMYQVLQ 415
+K+L H LV+L V+ + + +Y + EYM+ L ++ L + + +M Q+ +
Sbjct: 62 MKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+AF+ + HRD++ N+L T KIADFGLAR I T ++ + APE
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPE 180
Query: 473 VLLHST 478
+ + T
Sbjct: 181 AINYGT 186
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKF-LPESIIRNMMYQVLQ 415
+K+L H LV+L V+ + + +Y + EYM+ L ++ L + + +M Q+ +
Sbjct: 64 MKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 122
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+AF+ + HRD++ N+L T KIADFGLAR I T ++ + APE
Sbjct: 123 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 182
Query: 473 VLLHST 478
+ + T
Sbjct: 183 AINYGT 188
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 348 EMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESII 406
+ VV +Y L++ N VK +++ TL+ EY + LY LI +
Sbjct: 62 QYVVRYYAAWLER---RNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY 118
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR----------- 455
+ Q+L+ L+++H G HRD+KP N+ + VKI DFGLA+ +
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 456 -----SRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPIQTTCLLA 510
S T + T Y A EVL + Y+ I + S +F+ + + P T
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMY-SLGIIFFEM--IYPFST----- 230
Query: 511 GTERLKSSYILLHTLPLYTYHVPP 534
G ER+ +L L + PP
Sbjct: 231 GMERVN----ILKKLRSVSIEFPP 250
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKF-LPESIIRNMMYQVLQ 415
+K+L H LV+L V+ + + +Y + EYM+ L ++ L + + +M Q+ +
Sbjct: 62 MKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+AF+ + HRD++ N+L T KIADFGLAR I T ++ + APE
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 473 VLLHST 478
+ + T
Sbjct: 181 AINYGT 186
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKF-LPESIIRNMMYQVLQ 415
+K+L H LV+L V+ + + +Y + EYM+ L ++ L + + +M Q+ +
Sbjct: 63 MKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 121
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
G+AF+ + HRD++ N+L T KIADFGLAR I T ++ + APE
Sbjct: 122 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 181
Query: 473 VLLHST 478
+ + T
Sbjct: 182 AINYGT 187
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIR-NMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ +++ M Q+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + YT + ++ + APE
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 184
Query: 473 VLLHS 477
L ++
Sbjct: 185 SLAYN 189
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + SH N+++L+ VI + + + EYM+ L + +R++D + M+ + G
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 159
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST------RWYRA 470
+ ++ + HRD+ N+L + K++DFGL+R + P Y ++ RW A
Sbjct: 160 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW-TA 218
Query: 471 PEVLLHSTAYSA 482
PE + + SA
Sbjct: 219 PEAISYRKFTSA 230
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
L K+ H N+V L ++ LY + + + L+ I ++ F E +++QVL
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDA 128
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAR-EIRSRPYTDYVSTRWYRAPE 472
+ ++H G HRD+KPENLL + + I+DFGL++ E + T Y APE
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 473 VL 474
VL
Sbjct: 189 VL 190
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIR-NMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ +++ M Q+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + YT + ++ + APE
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 187
Query: 473 VLLHS 477
L ++
Sbjct: 188 SLAYN 192
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 8/105 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
L+ H N++ LK+V + +Y V E MK E L +++R KF E +++ + +
Sbjct: 70 LRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ--KFFSEREASAVLFTITK 127
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGT----ELVKIADFGLAREIRS 456
+ ++H G HRD+KP N+L + E ++I DFG A+++R+
Sbjct: 128 TVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
L K+ H N+V L ++ LY + + + L+ I ++ F E +++QVL
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDA 128
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAR-EIRSRPYTDYVSTRWYRAPE 472
+ ++H G HRD+KPENLL + + I+DFGL++ E + T Y APE
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 473 VL 474
VL
Sbjct: 189 VL 190
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
L K+ H N+V L ++ LY + + + L+ I ++ F E +++QVL
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDA 128
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAR-EIRSRPYTDYVSTRWYRAPE 472
+ ++H G HRD+KPENLL + + I+DFGL++ E + T Y APE
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 473 VL 474
VL
Sbjct: 189 VL 190
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 27/128 (21%)
Query: 353 FYRKS--LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFL----PESII 406
F+R++ L L H ++VK V E D L VFEYMK D +KFL P++++
Sbjct: 62 FHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG------DLNKFLRAHGPDAVL 115
Query: 407 R---------------NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA 451
++ Q+ G+ ++ F HRD+ N L LVKI DFG++
Sbjct: 116 MAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175
Query: 452 REIRSRPY 459
R++ S Y
Sbjct: 176 RDVYSTDY 183
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIR-NMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ +++ M Q+
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + YT + ++ + APE
Sbjct: 136 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 195
Query: 473 VLLHS 477
L ++
Sbjct: 196 SLAYN 200
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 348 EMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESII 406
+ VV +Y L++ N VK +++ TL+ EY + LY LI +
Sbjct: 62 QYVVRYYAAWLER---RNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY 118
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR----------- 455
+ Q+L+ L+++H G HRD+KP N+ + VKI DFGLA+ +
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 456 -----SRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPIQTTCLLA 510
S T + T Y A EVL + Y+ I + S +F+ + + P T
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMY-SLGIIFFEM--IYPFST----- 230
Query: 511 GTERLKSSYILLHTLPLYTYHVPP 534
G ER+ +L L + PP
Sbjct: 231 GMERVN----ILKKLRSVSIEFPP 250
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ ++ + V EYM+ L +R D + M+ + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------VSTRWYRA 470
+ ++ GF HRD+ N+L + K++DFGL+R + P Y + RW +
Sbjct: 160 MKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 471 PEVLLHSTAYSA 482
PE + + SA
Sbjct: 219 PEAIAYRKFTSA 230
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRD-RDKFLPESIIRNMMYQV 413
K + LSH LV+L V + ++ + EYM L +R+ R +F + ++ M V
Sbjct: 71 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE-MCKDV 129
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRA 470
+ + ++ F HRD+ N L +VK++DFGL+R + YT V +++ +
Sbjct: 130 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 189
Query: 471 PEVLLHS 477
PEVL++S
Sbjct: 190 PEVLMYS 196
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRD-RDKFLPESIIRNMMYQV 413
K + LSH LV+L V + ++ + EYM L +R+ R +F + ++ M V
Sbjct: 56 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE-MCKDV 114
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRA 470
+ + ++ F HRD+ N L +VK++DFGL+R + YT +++ +
Sbjct: 115 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSP 174
Query: 471 PEVLLHS 477
PEVL++S
Sbjct: 175 PEVLMYS 181
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQGL 417
+ L H N+V+ KEVI L + EY LY+ I + +F E R Q+L G+
Sbjct: 71 RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRF-SEDEARFFFQQLLSGV 129
Query: 418 AFMHRHGFFHRDMKPENLLCMGTEL--VKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
++ H HRD+K EN L G+ +KI DFG ++ + S+P + V T Y APEV
Sbjct: 130 SYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEV 188
Query: 474 LL 475
LL
Sbjct: 189 LL 190
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 358 LKKLSHANLVKLKEVI--RENDTLYFVFEYMKE-NLYQLIRDRDK---FLPESIIRNMMY 411
L++L H N+V+ + I R N TLY V EY + +L +I K +L E + +M
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 412 QVLQGLAFMHR-----HGFFHRDMKPENLLCMGTELVKIADFGLAREIR--SRPYTDYVS 464
Q+ L HR H HRD+KP N+ G + VK+ DFGLAR + + +V
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVG 178
Query: 465 TRWYRAPE 472
T +Y +PE
Sbjct: 179 TPYYMSPE 186
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 366 LVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHG 424
LVKL+ ++N LY V EY ++ +R +F E R Q++ ++H
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLHSLD 162
Query: 425 FFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAYSAPI 484
+RD+KPENLL +K+ADFG A+ ++ R + T Y APE++L S Y+ +
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX-LCGTPEYLAPEIIL-SKGYNKAV 220
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 358 LKKLSHANLVKLKEVI--RENDTLYFVFEYMKE-NLYQLIRDRDK---FLPESIIRNMMY 411
L++L H N+V+ + I R N TLY V EY + +L +I K +L E + +M
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 412 QVLQGLAFMHR-----HGFFHRDMKPENLLCMGTELVKIADFGLAREIR--SRPYTDYVS 464
Q+ L HR H HRD+KP N+ G + VK+ DFGLAR + + +V
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVG 178
Query: 465 TRWYRAPE 472
T +Y +PE
Sbjct: 179 TPYYMSPE 186
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQI 151
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R +T T Y APE+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-LCGTPEYLAPEI 210
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 211 IL-SKGYNKAV 220
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 10/150 (6%)
Query: 334 QDNHILSRHVSSRDEMVVCFYRKSL---KKLSHANLVKLKEVIRENDTLYFVFEYMKEN- 389
Q N +++ R E + ++ + + L H N+V+ KEVI L V EY
Sbjct: 42 QSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTEL--VKIAD 447
L++ I + +F E R Q++ G+++ H HRD+K EN L G+ +KI D
Sbjct: 102 LFERICNAGRF-SEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICD 160
Query: 448 FGLARE--IRSRPYTDYVSTRWYRAPEVLL 475
FG ++ + S+P + V T Y APEVLL
Sbjct: 161 FGYSKSSVLHSQPKS-TVGTPAYIAPEVLL 189
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 78 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQI 136
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R +T T Y APE+
Sbjct: 137 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-LCGTPEYLAPEI 195
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 196 IL-SKGYNKAV 205
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 9/105 (8%)
Query: 381 FVFEYMKENLYQLIRDRD-KFLPESIIRNMMYQVLQGLAFMHRH-GFFHRDMKPENLLCM 438
VFE + ENL LI+ + + +P ++ + Q+L GL +MHR G H D+KPEN+L
Sbjct: 107 MVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME 166
Query: 439 GTE------LVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHS 477
+ +KIAD G A YT+ + TR YR+PEVLL +
Sbjct: 167 IVDSPENLIQIKIADLGNACWYDEH-YTNSIQTREYRSPEVLLGA 210
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ ++ + V EYM+ L +R D + M+ + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------VSTRWYRA 470
+ ++ G+ HRD+ N+L + K++DFGLAR + P Y + RW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 471 PEVLLHSTAYSA 482
PE + + SA
Sbjct: 219 PEAIAYRKFTSA 230
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 33/159 (20%)
Query: 355 RKSLKKLSHAN---------LVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESI 405
R ++ L H N V++ E + + VFE + + Y I++ + FLP +
Sbjct: 59 RSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKE-NGFLPFRL 117
Query: 406 --IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTEL-------------------VK 444
IR M YQ+ + + F+H + H D+KPEN+L + ++ +K
Sbjct: 118 DHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIK 177
Query: 445 IADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAYSAP 483
+ DFG A ++ VSTR YRAPEV+L + +S P
Sbjct: 178 VVDFGSA-TYDDEHHSTLVSTRHYRAPEVIL-ALGWSQP 214
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
Query: 382 VFEYMKENLYQLIRDRD-KFLPESIIRNMMYQVLQGLAFMHRH-GFFHRDMKPENLLCMG 439
VFE + ENL LI+ + + +P ++ + Q+L GL +MHR G H D+KPEN+L
Sbjct: 108 VFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI 167
Query: 440 TE------LVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHS 477
+ +KIAD G A YT+ + TR YR+PEVLL +
Sbjct: 168 VDSPENLIQIKIADLGNACWYDEH-YTNSIQTREYRSPEVLLGA 210
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
+ L H N+V+ KEVI L V EY L++ I + +F E R Q++ G+
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF-SEDEARFFFQQLISGV 128
Query: 418 AFMHRHGFFHRDMKPENLLCMGTEL--VKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
++ H HRD+K EN L G+ +KIADFG ++ + S+P + V T Y APEV
Sbjct: 129 SYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKS-AVGTPAYIAPEV 187
Query: 474 LL 475
LL
Sbjct: 188 LL 189
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIR-NMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ +++ M Q+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + YT + ++ + APE
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 187
Query: 473 VLLHS 477
L ++
Sbjct: 188 SLAYN 192
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRD-RDKFLPESIIRNMMYQV 413
K + LSH LV+L V + ++ + EYM L +R+ R +F + ++ M V
Sbjct: 51 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL-EMCKDV 109
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRA 470
+ + ++ F HRD+ N L +VK++DFGL+R + YT V +++ +
Sbjct: 110 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 169
Query: 471 PEVLLHS 477
PEVL++S
Sbjct: 170 PEVLMYS 176
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 119
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 120 LEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 179
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 59.3 bits (142), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKF-LPESIIRNMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ + ++ M Q+
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + +T + ++ + APE
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPE 180
Query: 473 VLLHS 477
L ++
Sbjct: 181 SLAYN 185
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 358 LKKLSHA--NLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 108 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 166
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 167 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 226
Query: 473 VL 474
+
Sbjct: 227 WI 228
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDK-FLPESIIRNMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ + ++ M Q+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + YT + ++ + APE
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 473 VLLHS 477
L ++
Sbjct: 183 SLAYN 187
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
Query: 358 LKKLSHA--NLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 108 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 166
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 167 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 226
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 358 LKKLSHA--NLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 113 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 171
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 172 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 231
Query: 473 VL 474
+
Sbjct: 232 WI 233
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ KLSH LV+L V E + V E+M+ L +R + + M V +G
Sbjct: 57 MMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 116
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPEV 473
+A++ HRD+ N L +++K++DFG+ R + YT T++ + +PEV
Sbjct: 117 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 176
Query: 474 LLHS 477
S
Sbjct: 177 FSFS 180
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 358 LKKLSHA--NLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 108 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 166
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 167 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 226
Query: 473 VL 474
+
Sbjct: 227 WI 228
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 119
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 120 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 179
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENL+ +K+ DFGLA+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 119
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 120 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 179
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIR-NMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ +++ M Q+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + YT + ++ + APE
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 187
Query: 473 VLLHS 477
L ++
Sbjct: 188 SLAYN 192
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDK-FLPESIIRNMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ + ++ M Q+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 127
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + YT + ++ + APE
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 187
Query: 473 VLLHS 477
L ++
Sbjct: 188 SLAYN 192
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 64 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 122
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 123 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 182
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIR-DRDKFLPESIIRNMMYQVLQ 415
+K L H LVKL V+ + + +Y + E+M K +L ++ D P + + Q+ +
Sbjct: 231 MKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAE 289
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
G+AF+ + + HRD++ N+L + + KIADFGLAR
Sbjct: 290 GMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 326
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 27/170 (15%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMK----ENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
N++KL + +++ + T VFEY+ + LYQ++ D D IR MY++L+ L
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFD-------IRFYMYELLKALD 146
Query: 419 FMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLH 476
+ H G HRD+KP N++ + +++ D+GLA ++ Y V++R+++ PE+L+
Sbjct: 147 YCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVD 206
Query: 477 STAYSAPIHLS-----------RSQQFLFYSIDHVPPIQTTCLLAGTERL 515
Y + + R + F F+ D+ + + GTE L
Sbjct: 207 YQMYDYSLDMWSLGCMLASMIFRREPF-FHGQDNYDQLVRIAKVLGTEEL 255
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ ++ + V EYM+ L +R D + M+ + G
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 147
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------VSTRWYRA 470
+ ++ G+ HRD+ N+L + K++DFGL+R + P Y + RW +
Sbjct: 148 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 206
Query: 471 PEVLLHSTAYSA 482
PE + + SA
Sbjct: 207 PEAIAYRKFTSA 218
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIR-NMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ +++ M Q+
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 126
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + YT + ++ + APE
Sbjct: 127 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 186
Query: 473 VLLHS 477
L ++
Sbjct: 187 SLAYN 191
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ ++ + V EYM+ L +R D + M+ + G
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 157
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------VSTRWYRA 470
+ ++ G+ HRD+ N+L + K++DFGL+R + P Y + RW +
Sbjct: 158 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 216
Query: 471 PEVLLHSTAYSA 482
PE + + SA
Sbjct: 217 PEAIAYRKFTSA 228
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 88 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 146
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 147 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 206
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ ++ + V EYM+ L +R D + M+ + G
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------VSTRWYRA 470
+ ++ G+ HRD+ N+L + K++DFGL+R + P Y + RW +
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 189
Query: 471 PEVLLHSTAYSA 482
PE + + SA
Sbjct: 190 PEAIAYRKFTSA 201
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
L K+ H N+V L ++ LY + + + L+ I ++ F E +++QVL
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-GFYTERDASRLIFQVLDA 128
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAR-EIRSRPYTDYVSTRWYRAPE 472
+ ++H G HRD+KPENLL + + I+DFGL++ E + T Y APE
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 473 VL 474
VL
Sbjct: 189 VL 190
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDK-FLPESIIRNMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ + ++ M Q+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + YT + ++ + APE
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 473 VLLHS 477
L ++
Sbjct: 183 SLAYN 187
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ ++ + V EYM+ L +R D + M+ + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------VSTRWYRA 470
+ ++ G+ HRD+ N+L + K++DFGL+R + P Y + RW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 471 PEVLLHSTAYSA 482
PE + + SA
Sbjct: 219 PEAIAYRKFTSA 230
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ ++ + V EYM+ L +R D + M+ + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------VSTRWYRA 470
+ ++ G+ HRD+ N+L + K++DFGL R + P Y + RW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 471 PEVLLHSTAYSA 482
PE + + SA
Sbjct: 219 PEAIAYRKFTSA 230
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDK-FLPESIIRNMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ + ++ M Q+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + YT + ++ + APE
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 473 VLLHS 477
L ++
Sbjct: 183 SLAYN 187
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIR-NMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ +++ M Q+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + YT + ++ + APE
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 473 VLLHS 477
L ++
Sbjct: 183 SLAYN 187
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 65 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 123
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 183
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 66 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 124
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 184
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ ++ + V EYM+ L +R D + M+ + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------VSTRWYRA 470
+ ++ G+ HRD+ N+L + K++DFGL+R + P Y + RW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 471 PEVLLHSTAYSA 482
PE + + SA
Sbjct: 219 PEAIAYRKFTSA 230
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ ++ + V EYM+ L +R D + M+ + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------VSTRWYRA 470
+ ++ G+ HRD+ N+L + K++DFGL+R + P Y + RW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 471 PEVLLHSTAYSA 482
PE + + SA
Sbjct: 219 PEAIAYRKFTSA 230
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 66 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 124
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 184
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 81 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 139
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 199
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 27/170 (15%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMK----ENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
N++KL + +++ + T VFEY+ + LYQ++ D D IR MY++L+ L
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFD-------IRFYMYELLKALD 151
Query: 419 FMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLH 476
+ H G HRD+KP N++ + +++ D+GLA ++ Y V++R+++ PE+L+
Sbjct: 152 YCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVD 211
Query: 477 STAYSAPIHLS-----------RSQQFLFYSIDHVPPIQTTCLLAGTERL 515
Y + + R + F F+ D+ + + GTE L
Sbjct: 212 YQMYDYSLDMWSLGCMLASMIFRREPF-FHGQDNYDQLVRIAKVLGTEEL 260
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ ++ + V EYM+ L +R D + M+ + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------VSTRWYRA 470
+ ++ G+ HRD+ N+L + K++DFGL+R + P Y + RW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 471 PEVLLHSTAYSA 482
PE + + SA
Sbjct: 219 PEAIAYRKFTSA 230
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 81 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 139
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 199
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 81 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 139
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 199
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIR-NMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ +++ M Q+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + YT + ++ + APE
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 473 VLLHS 477
L ++
Sbjct: 183 SLAYN 187
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 66 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 124
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 184
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIR-NMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ +++ M Q+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + YT + ++ + APE
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 184
Query: 473 VLLHS 477
L ++
Sbjct: 185 SLAYN 189
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 40/149 (26%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFL----PESII------- 406
L L H ++VK V + D L VFEYMK D +KFL P+++I
Sbjct: 71 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG------DLNKFLRAHGPDAMILVDGQPR 124
Query: 407 --------RNMMY---QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR 455
M++ Q+ G+ ++ F HRD+ N L LVKI DFG++R++
Sbjct: 125 QAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVY 184
Query: 456 SRPYTDY--------VSTRWYRAPEVLLH 476
S TDY + RW PE +++
Sbjct: 185 S---TDYYRVGGHTMLPIRWM-PPESIMY 209
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
L+ H N++ LK+V + +Y V E K E L +++R KF E +++ + +
Sbjct: 70 LRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQ--KFFSEREASAVLFTITK 127
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGT----ELVKIADFGLAREIRS 456
+ ++H G HRD+KP N+L + E ++I DFG A+++R+
Sbjct: 128 TVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ V EYM+ L +R D + M+ V G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST------RWYRA 470
+ ++ G+ HRD+ N+L + K++DFGL+R + P Y +T RW A
Sbjct: 164 MRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWT-A 222
Query: 471 PEVLLHSTAYSA 482
PE + T SA
Sbjct: 223 PEAIAFRTFSSA 234
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIR-NMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ +++ M Q+
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + YT ++ + APE
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE 183
Query: 473 VLLHS 477
L ++
Sbjct: 184 SLAYN 188
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 100 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 158
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 159 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 218
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LAGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 80 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 138
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 139 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 198
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 80 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 138
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 139 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 198
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 93 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 151
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 211
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 94 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 152
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 212
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 345 SRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFL-P 402
SR E+ V L + H N+V+ +E EN +LY V +Y + +L++ I + L
Sbjct: 70 SRREVAV------LANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQ 123
Query: 403 ESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS--RPYT 460
E I + Q+ L +H HRD+K +N+ V++ DFG+AR + S
Sbjct: 124 EDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR 183
Query: 461 DYVSTRWYRAPEV 473
+ T +Y +PE+
Sbjct: 184 ACIGTPYYLSPEI 196
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 94 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 152
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 212
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 94 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 152
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 212
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 94 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 152
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 212
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 93 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 151
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 211
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 93 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 151
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 211
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 358 LKKLSH--ANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S + +++L + D+ + E + ++L+ I +R L E + R+ +QV
Sbjct: 93 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 151
Query: 414 LQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L + +K+ DFG ++ YTD+ TR Y PE
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 211
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+V L+ V+ + V E+M+ L +R D + M+ + G
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAG 157
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST------RWYRA 470
+ ++ G+ HRD+ N+L + K++DFGL+R I P Y +T RW A
Sbjct: 158 MRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRW-TA 216
Query: 471 PEVLLHSTAYSA 482
PE + + SA
Sbjct: 217 PEAIQYRKFTSA 228
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 113 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX-EPHARFYAAQI 171
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 230
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 231 IL-SKGYNKAV 240
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX-EPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-AEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 20/154 (12%)
Query: 348 EMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESII 406
+ VV +Y L++ N VK +++ TL+ EY + LY LI +
Sbjct: 62 QYVVRYYAAWLER---RNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY 118
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR----------- 455
+ Q+L+ L+++H G HR++KP N+ + VKI DFGLA+ +
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 456 -----SRPYTDYVSTRWYRAPEVLLHSTAYSAPI 484
S T + T Y A EVL + Y+ I
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKI 212
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 85 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQI 143
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 202
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 203 IL-SKGYNKAV 212
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 79 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQI 137
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 138 VLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 196
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 197 IL-SKGYNKAV 206
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQI 151
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 210
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 211 IL-SKGYNKAV 220
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LXGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKF-LPESIIRNMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ + ++ M Q+
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + T + ++ + APE
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 180
Query: 473 VLLHS 477
L ++
Sbjct: 181 SLAYN 185
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 8/105 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
L+ H N++ LK+V + +Y V E M+ E L +++R KF E +++ + +
Sbjct: 75 LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ--KFFSEREASFVLHTIGK 132
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGT----ELVKIADFGLAREIRS 456
+ ++H G HRD+KP N+L + E ++I DFG A+++R+
Sbjct: 133 TVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA 177
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQI 151
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 210
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 211 IL-SKGYNKAV 220
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX-EPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 85 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX-EPHARFYAAQI 143
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 202
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 203 IL-SKGYNKAV 212
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 113 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQI 171
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 230
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 231 IL-SKGYNKAV 240
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 3/129 (2%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIR-DRDKFLPESIIRNMMYQVLQG 416
L H N+VKL + + L+ + E+ + + ++ L ES I+ + Q L
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 147
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGL-AREIRSRPYTD-YVSTRWYRAPEVL 474
L ++H + HRD+K N+L +K+ADFG+ A+ R+ D ++ T ++ APEV+
Sbjct: 148 LNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVV 207
Query: 475 LHSTAYSAP 483
+ T+ P
Sbjct: 208 MCETSKDRP 216
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQI 151
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 210
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 211 IL-SKGYNKAV 220
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQI 151
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 210
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 211 IL-SKGYNKAV 220
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX-EPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 61/128 (47%), Gaps = 7/128 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
LK + H LV L + D LYFV +Y+ E Y L R+R P + R ++
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRA--RFYAAEIAS 150
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTD-YVSTRWYRAPEV 473
L ++H +RD+KPEN+L + + DFGL +E I T + T Y APEV
Sbjct: 151 ALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEV 210
Query: 474 LLHSTAYS 481
LH Y
Sbjct: 211 -LHKQPYD 217
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIR-DRDKFLPESIIRNMMYQVLQG 416
L H N+VKL + + L+ + E+ + + ++ L ES I+ + Q L
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 147
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA----REIRSRPYTDYVSTRWYRAPE 472
L ++H + HRD+K N+L +K+ADFG++ R I+ R ++ T ++ APE
Sbjct: 148 LNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRR--DSFIGTPYWMAPE 205
Query: 473 VLLHSTAYSAP 483
V++ T+ P
Sbjct: 206 VVMCETSKDRP 216
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQI 151
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 210
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 211 IL-SKGYNKAV 220
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY ++ +R +F E R Q+
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRF-SEPHARFYAAQI 151
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENL+ +K+ DFG A+ ++ R + T Y APE+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 210
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 211 IL-SKGYNKAV 220
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENL+ +K+ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDK-FLPESIIRNMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ + ++ M Q+
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HR++ N L LVK+ADFGL+R + YT + ++ + APE
Sbjct: 330 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 389
Query: 473 VLLHS 477
L ++
Sbjct: 390 SLAYN 394
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIR-DRDKFLPESIIRNMMYQVLQG 416
L H N+VKL + + L+ + E+ + + ++ L ES I+ + Q L
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 147
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA----REIRSRPYTDYVSTRWYRAPE 472
L ++H + HRD+K N+L +K+ADFG++ R I+ R ++ T ++ APE
Sbjct: 148 LNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDX--FIGTPYWMAPE 205
Query: 473 VLLHSTAYSAP 483
V++ T+ P
Sbjct: 206 VVMCETSKDRP 216
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 8/106 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
L+ H N++ LK+V + +Y V E M+ E L +++R KF E +++ + +
Sbjct: 75 LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ--KFFSEREASFVLHTIGK 132
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGT----ELVKIADFGLAREIRSR 457
+ ++H G HRD+KP N+L + E ++I DFG A+++R+
Sbjct: 133 TVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE 178
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVL 414
R L+++ H +V L + LY + EY+ + +R+ E + ++
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEIS 131
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYT-DYVSTRWYRAPE 472
L +H+ G +RD+KPEN++ VK+ DFGL +E I T + T Y APE
Sbjct: 132 MALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPE 191
Query: 473 VLLHS 477
+L+ S
Sbjct: 192 ILMRS 196
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVL 414
R L+++ H +V L + LY + EY+ + +R+ E + ++
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEIS 131
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYT-DYVSTRWYRAPE 472
L +H+ G +RD+KPEN++ VK+ DFGL +E I T + T Y APE
Sbjct: 132 MALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPE 191
Query: 473 VLLHS 477
+L+ S
Sbjct: 192 ILMRS 196
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX-EPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 87 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX-EPHARFYAAQI 145
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 146 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 204
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 205 IL-SKGYNKAV 214
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENL+ +++ DFGLA+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFX-EPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENL+ +K+ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX-EPHARFYAAQI 151
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 210
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 211 IL-SKGYNKAV 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEY-MKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+K L H N+++L E +N +Y V E L++ + + F ES +M VL
Sbjct: 60 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFR-ESDAARIMKDVLSA 118
Query: 417 LAFMHRHGFFHRDMKPENLLCMG---TELVKIADFGLAREIR-SRPYTDYVSTRWYRAPE 472
+A+ H+ HRD+KPEN L + +K+ DFGLA + + V T +Y +P+
Sbjct: 119 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ 178
Query: 473 VL 474
VL
Sbjct: 179 VL 180
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIR-NMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ +++ M Q+
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 368
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HR++ N L LVK+ADFGL+R + YT + ++ + APE
Sbjct: 369 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 428
Query: 473 VLLHS 477
L ++
Sbjct: 429 SLAYN 433
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIR-NMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ +++ M Q+
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 326
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HR++ N L LVK+ADFGL+R + YT + ++ + APE
Sbjct: 327 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 386
Query: 473 VLLHS 477
L ++
Sbjct: 387 SLAYN 391
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX-EPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 113 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQI 171
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ +T T Y APE+
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT-LCGTPEYLAPEI 230
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 231 IL-SKGYNKAV 240
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEY-MKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+K L H N+++L E +N +Y V E L++ + + F ES +M VL
Sbjct: 77 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFR-ESDAARIMKDVLSA 135
Query: 417 LAFMHRHGFFHRDMKPENLLCMG---TELVKIADFGLAREIR-SRPYTDYVSTRWYRAPE 472
+A+ H+ HRD+KPEN L + +K+ DFGLA + + V T +Y +P+
Sbjct: 136 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ 195
Query: 473 VL 474
VL
Sbjct: 196 VL 197
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQGL 417
+ L H N+V+ KEVI L V EY L++ I + +F E R Q++ G+
Sbjct: 69 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF-SEDEARFFFQQLISGV 127
Query: 418 AFMHRHGFFHRDMKPENLLCMGTEL--VKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
++ H HRD+K EN L G+ +KI DFG ++ + S+P + V T Y APEV
Sbjct: 128 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEV 186
Query: 474 LL 475
LL
Sbjct: 187 LL 188
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 397 RDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI-- 454
+ L ES I ++ +VL+GL ++H++G HRD+K N+L V+IADFG++ +
Sbjct: 109 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 168
Query: 455 -----RSRPYTDYVSTRWYRAPEVLLHSTAYS 481
R++ +V T + APEV+ Y
Sbjct: 169 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYD 200
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 397 RDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI-- 454
+ L ES I ++ +VL+GL ++H++G HRD+K N+L V+IADFG++ +
Sbjct: 114 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 173
Query: 455 -----RSRPYTDYVSTRWYRAPEVLLHSTAYS 481
R++ +V T + APEV+ Y
Sbjct: 174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYD 205
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 4/163 (2%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
++ H N+V++ + + L+ + E+++ I + + L E I + VLQ L
Sbjct: 96 MRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR-LNEEQIATVCEAVLQAL 154
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSR--PYTDYVSTRWYRAPEVLL 475
A++H G HRD+K +++L VK++DFG +I V T ++ APEV+
Sbjct: 155 AYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVIS 214
Query: 476 HSTAYSAPIHLSRSQQFLFYSIDHVPPIQTTCLLAGTERLKSS 518
S Y+ + + + +D PP + + +RL+ S
Sbjct: 215 RSL-YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS 256
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
Query: 358 LKKLS-HANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQ 415
L+K+S H N+++LK+ N + VF+ MK+ L+ + ++ L E R +M +L+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT-LSEKETRKIMRALLE 135
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRAPEVL 474
+ +H+ HRD+KPEN+L +K+ DFG + ++ + T Y APE++
Sbjct: 136 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 195
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
Query: 358 LKKLS-HANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQ 415
L+K+S H N+++LK+ N + VF+ MK+ L+ + ++ L E R +M +L+
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT-LSEKETRKIMRALLE 122
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRAPEVL 474
+ +H+ HRD+KPEN+L +K+ DFG + ++ + T Y APE++
Sbjct: 123 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 182
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 376 NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFM-HRHGFFHRDMKPEN 434
+ + E+M + + +PE I+ + V++GL ++ +H HRD+KP N
Sbjct: 138 DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSN 197
Query: 435 LLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAYS 481
+L +K+ DFG++ ++ +V TR Y +PE L T YS
Sbjct: 198 ILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYS 243
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDK-FLPESIIRNMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ + ++ M Q+
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + T + ++ + APE
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 180
Query: 473 VLLHS 477
L ++
Sbjct: 181 SLAYN 185
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIR-NMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ +++ M Q+
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + T + ++ + APE
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 183
Query: 473 VLLHS 477
L ++
Sbjct: 184 SLAYN 188
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRD-RDKFLPESIIRNMMYQV 413
K + LSH LV+L V + ++ + EYM L +R+ R +F + ++ M V
Sbjct: 71 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE-MCKDV 129
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRA 470
+ + ++ F HRD+ N L +VK++DFGL+R + T V +++ +
Sbjct: 130 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSP 189
Query: 471 PEVLLHS 477
PEVL++S
Sbjct: 190 PEVLMYS 196
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIR-NMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ +++ M Q+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + YT ++ + APE
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE 184
Query: 473 VLLHS 477
L ++
Sbjct: 185 SLAYN 189
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIR-DRDKFLPESIIRNMMYQVLQG 416
L H N+VKL + + L+ + E+ + + ++ L ES I+ + Q L
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 120
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGL-AREIRS--RPYTDYVSTRWYRAPEV 473
L ++H + HRD+K N+L +K+ADFG+ A+ R+ + ++ T ++ APEV
Sbjct: 121 LNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEV 180
Query: 474 LLHSTAYSAP 483
++ T+ P
Sbjct: 181 VMCETSKDRP 190
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENL+ +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
++ S Y+ +
Sbjct: 210 II-SKGYNKAV 219
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENL+ +++ DFG A+ ++ R + T Y APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 362 SHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQGLAFM 420
H N+VKL EV + + V E + L++ I+ + F E+ +M +++ ++ M
Sbjct: 64 GHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHF-SETEASYIMRKLVSAVSHM 122
Query: 421 HRHGFFHRDMKPENLLCMGTE---LVKIADFGLAR--EIRSRPYTDYVSTRWYRAPEVLL 475
H G HRD+KPENLL +KI DFG AR ++P T Y APE LL
Sbjct: 123 HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPE-LL 181
Query: 476 HSTAYSAPIHLSRSQQFLFYSIDHVPPIQT 505
+ Y L L+ + P Q+
Sbjct: 182 NQNGYDESCDLWSLGVILYTMLSGQVPFQS 211
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 37/145 (25%)
Query: 366 LVKLKEVIRENDTL------YF--------VFEYMKENLYQLIRDRDKFLPESI--IRNM 409
L K+KE +EN L +F FE + +N ++ +++ + F P + +R+M
Sbjct: 102 LKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKE-NNFQPYPLPHVRHM 160
Query: 410 MYQVLQGLAFMHRHGFFHRDMKPENLLCMGTEL-------------------VKIADFGL 450
YQ+ L F+H + H D+KPEN+L + +E +++ADFG
Sbjct: 161 AYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 220
Query: 451 AREIRSRPYTDYVSTRWYRAPEVLL 475
A +T V+TR YR PEV+L
Sbjct: 221 AT-FDHEHHTTIVATRHYRPPEVIL 244
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 27/112 (24%)
Query: 383 FEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTEL 442
FE++KEN +Q P +R+M YQ+ L F+H + H D+KPEN+L + +E
Sbjct: 109 FEFLKENNFQP-------YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEF 161
Query: 443 -------------------VKIADFGLAREIRSRPYTDYVSTRWYRAPEVLL 475
+++ADFG A +T V+TR YR PEV+L
Sbjct: 162 ETLYNEHKSCEEKSVKNTSIRVADFGSAT-FDHEHHTTIVATRHYRPPEVIL 212
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 358 LKKLS-HANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQ 415
L+K+S H N+++LK+ N + VF+ MK+ L+ + ++ L E R +M +L+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT-LSEKETRKIMRALLE 135
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRAPEVL 474
+ +H+ HRD+KPEN+L +K+ DFG + ++ T Y APE++
Sbjct: 136 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEII 195
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQGL 417
+ L H N+V+ KEVI L V EY L++ I + +F E R Q++ G+
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF-SEDEARFFFQQLISGV 128
Query: 418 AFMHRHGFFHRDMKPENLLCMGTEL--VKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
++ H HRD+K EN L G+ +KI FG ++ + S+P D V T Y APEV
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP-KDTVGTPAYIAPEV 187
Query: 474 LL 475
LL
Sbjct: 188 LL 189
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 27/112 (24%)
Query: 383 FEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTEL 442
FE++KEN +Q P +R+M YQ+ L F+H + H D+KPEN+L + +E
Sbjct: 118 FEFLKENNFQP-------YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEF 170
Query: 443 -------------------VKIADFGLAREIRSRPYTDYVSTRWYRAPEVLL 475
+++ADFG A +T V+TR YR PEV+L
Sbjct: 171 ETLYNEHKSCEEKSVKNTSIRVADFGSAT-FDHEHHTTIVATRHYRPPEVIL 221
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 401 LPESIIRNMMYQVLQGLAFM-HRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
+PE I+ + V++GL ++ +H HRD+KP N+L +K+ DFG++ ++
Sbjct: 104 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMA 163
Query: 460 TDYVSTRWYRAPEVLLHSTAYS 481
++V TR Y +PE L T YS
Sbjct: 164 NEFVGTRSYMSPE-RLQGTHYS 184
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 376 NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFM-HRHGFFHRDMKPEN 434
+ + E+M + + +PE I+ + V++GL ++ +H HRD+KP N
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSN 135
Query: 435 LLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAYS 481
+L +K+ DFG++ ++ +V TR Y +PE L T YS
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYS 181
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 376 NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFM-HRHGFFHRDMKPEN 434
+ + E+M + + +PE I+ + V++GL ++ +H HRD+KP N
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSN 135
Query: 435 LLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAYS 481
+L +K+ DFG++ ++ +V TR Y +PE L T YS
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYS 181
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 376 NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFM-HRHGFFHRDMKPEN 434
+ + E+M + + +PE I+ + V++GL ++ +H HRD+KP N
Sbjct: 103 DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSN 162
Query: 435 LLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAYS 481
+L +K+ DFG++ ++ +V TR Y +PE L T YS
Sbjct: 163 ILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYS 208
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 33/159 (20%)
Query: 355 RKSLKKLSHAN---------LVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESI 405
R ++ L H N V++ E + + VFE + + Y I++ + FLP +
Sbjct: 59 RSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKE-NGFLPFRL 117
Query: 406 --IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTEL-------------------VK 444
IR M YQ+ + + F+H + H D+KPEN+L + ++ +K
Sbjct: 118 DHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIK 177
Query: 445 IADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAYSAP 483
+ DFG A ++ V R YRAPEV+L + +S P
Sbjct: 178 VVDFGSA-TYDDEHHSTLVXXRHYRAPEVIL-ALGWSQP 214
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ L KL+ ++N LY V EY ++ +R +F E R Q+
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRF-SEPHARFYAAQI 151
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENL+ +K+ DFG A+ ++ R + T Y APE+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 210
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 211 IL-SKGYNKAV 220
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ L KL+ ++N LY V EY ++ +R +F E R Q+
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRF-SEPHARFYAAQI 151
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENL+ +K+ DFG A+ ++ R + T Y APE+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 210
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 211 IL-SKGYNKAV 220
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFL--PESIIRNMMYQVLQG 416
L H ++V+L E + LY VFE+M + +++++ D E++ + M Q+L+
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL---VKIADFGLAREIRSRPYT--DYVSTRWYRAP 471
L + H + HRD+KP +L E VK+ FG+A ++ V T + AP
Sbjct: 145 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 204
Query: 472 EVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPIQTT 506
EV + Y P+ + LF + P T
Sbjct: 205 EV-VKREPYGKPVDVWGCGVILFILLSGCLPFYGT 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ L KL+ ++N LY V EY ++ +R +F E R Q+
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFX-EPHARFYAAQI 151
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENL+ +K+ DFG A+ ++ R + T Y APE+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-LCGTPEYLAPEI 210
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 211 IL-SKGYNKAV 220
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIR-NMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ +++ M Q+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW---YRAPE 472
+ ++ + F HRD+ N L LVK+ADFGL+R + T + ++ + APE
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 187
Query: 473 VLLHS 477
L ++
Sbjct: 188 SLAYN 192
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHR 422
N+VKL +++R+ + T +FEY+ ++++ L + IR +Y++L+ L + H
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 164
Query: 423 HGFFHRDMKPENLLCMGTEL--VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLHSTA 479
G HRD+KP N++ + EL +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 165 QGIMHRDVKPHNVM-IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 223
Query: 480 YSAPIHLS-----------RSQQFLFYSIDHVPPIQTTCLLAGTERLKS 517
Y + + R + F FY D+ + + GT+ L +
Sbjct: 224 YDYSLDMWSLGCMFAGMIFRKEPF-FYGHDNHDQLVKIAKVLGTDGLNA 271
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T Y AP +
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEYLAPAI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVL 414
K ++ L H N++K V+ ++ L F+ EY+K L +I+ D P S + +
Sbjct: 59 KVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIA 118
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
G+A++H HRD+ N L + V +ADFGLAR
Sbjct: 119 SGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLAR 156
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ ++ + V E M+ L +R D + M+ + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------VSTRWYRA 470
+ ++ G+ HRD+ N+L + K++DFGL+R + P Y + RW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 471 PEVLLHSTAYSA 482
PE + + SA
Sbjct: 219 PEAIAYRKFTSA 230
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ ++ + V E M+ L +R D + M+ + G
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------VSTRWYRA 470
+ ++ G+ HRD+ N+L + K++DFGL+R + P Y + RW +
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 189
Query: 471 PEVLLHSTAYSA 482
PE + + SA
Sbjct: 190 PEAIAYRKFTSA 201
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 376 NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFM-HRHGFFHRDMKPEN 434
+ + E+M + + +PE I+ + V++GL ++ +H HRD+KP N
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSN 135
Query: 435 LLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAYS 481
+L +K+ DFG++ ++ +V TR Y +PE L T YS
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYS 181
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 376 NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFM-HRHGFFHRDMKPEN 434
+ + E+M + + +PE I+ + V++GL ++ +H HRD+KP N
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSN 135
Query: 435 LLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAYS 481
+L +K+ DFG++ ++ +V TR Y +PE L T YS
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYS 181
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFL--PESIIRNMMYQVLQG 416
L H ++V+L E + LY VFE+M + +++++ D E++ + M Q+L+
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL---VKIADFGLAREIRSRPYT--DYVSTRWYRAP 471
L + H + HRD+KP +L E VK+ FG+A ++ V T + AP
Sbjct: 143 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 472 EVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPIQTT 506
EV + Y P+ + LF + P T
Sbjct: 203 EV-VKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHR 422
N+VKL +++R+ + T +FEY+ ++++ L + IR +Y++L+ L + H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 143
Query: 423 HGFFHRDMKPENLLCMGTEL--VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLHSTA 479
G HRD+KP N++ + EL +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 144 QGIMHRDVKPHNVM-IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 480 YSAPIHL 486
Y + +
Sbjct: 203 YDYSLDM 209
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 401 LPESIIRNMMYQVLQGLAFM-HRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
+PE I+ + V++GL ++ +H HRD+KP N+L +K+ DFG++ ++
Sbjct: 120 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 179
Query: 460 TDYVSTRWYRAPEVLLHSTAYS 481
+V TR Y +PE L T YS
Sbjct: 180 NSFVGTRSYMSPE-RLQGTHYS 200
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHR 422
N+VKL +++R+ + T +FEY+ ++++ L + IR +Y++L+ L + H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 143
Query: 423 HGFFHRDMKPENLLCMGTEL--VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLHSTA 479
G HRD+KP N++ + EL +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 144 QGIMHRDVKPHNVM-IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 480 YSAPIHL 486
Y + +
Sbjct: 203 YDYSLDM 209
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ V EYM+ L +R D + M+ V G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST------RWYRA 470
+ ++ G+ HRD+ N+L + K++DFGL+R + P +T RW A
Sbjct: 164 MRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWT-A 222
Query: 471 PEVLLHSTAYSA 482
PE + T SA
Sbjct: 223 PEAIAFRTFSSA 234
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHR 422
N+VKL +++R+ + T +FEY+ ++++ L + IR +Y++L+ L + H
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 144
Query: 423 HGFFHRDMKPENLLCMGTEL--VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLHSTA 479
G HRD+KP N++ + EL +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 145 QGIMHRDVKPHNVM-IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 203
Query: 480 YSAPIHL 486
Y + +
Sbjct: 204 YDYSLDM 210
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 341 RHVSSRDEMVVCFYRKSLKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLI 394
+ +S ++ C + +KKL+H N+V +EV + ND EY + L
Sbjct: 50 QELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGG--DLR 107
Query: 395 RDRDKF-----LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELV--KIA 446
+ ++F L E IR ++ + L ++H + HRD+KPEN++ G + + KI
Sbjct: 108 KYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKII 167
Query: 447 DFGLAREI-RSRPYTDYVSTRWYRAPEVLLHSTAYSAPI 484
D G A+E+ + T++V T Y APE LL Y+ +
Sbjct: 168 DLGYAKELDQGELCTEFVGTLQYLAPE-LLEQKKYTVTV 205
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 341 RHVSSRDEMVVCFYRKSLKKLSHANLVKLKEV------IRENDTLYFVFEYMKENLYQLI 394
+ +S ++ C + +KKL+H N+V +EV + ND EY + L
Sbjct: 49 QELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGG--DLR 106
Query: 395 RDRDKF-----LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCM-GTELV--KIA 446
+ ++F L E IR ++ + L ++H + HRD+KPEN++ G + + KI
Sbjct: 107 KYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKII 166
Query: 447 DFGLAREI-RSRPYTDYVSTRWYRAPEVLLHSTAYSAPI 484
D G A+E+ + T++V T Y APE LL Y+ +
Sbjct: 167 DLGYAKELDQGELCTEFVGTLQYLAPE-LLEQKKYTVTV 204
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 85/167 (50%), Gaps = 21/167 (12%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHR 422
N+VKL +++R+ + T +FEY+ ++++ L + IR +Y++L+ L + H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 143
Query: 423 HGFFHRDMKPENLLCMGTEL--VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLHSTA 479
G HRD+KP N++ + EL +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 144 QGIMHRDVKPHNVM-IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 480 YSAPIHLS-----------RSQQFLFYSIDHVPPIQTTCLLAGTERL 515
Y + + R + F FY D+ + + GT+ L
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPF-FYGHDNHDQLVKIAKVLGTDGL 248
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHR 422
N+VKL +++R+ + T +FEY+ ++++ L + IR +Y++L+ L + H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 143
Query: 423 HGFFHRDMKPENLLCMGTEL--VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLHSTA 479
G HRD+KP N++ + EL +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 144 QGIMHRDVKPHNVM-IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 480 YSAPIHL 486
Y + +
Sbjct: 203 YDYSLDM 209
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 346 RDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESI 405
RD + R L ++H +VKL + LY + ++++ ++ E
Sbjct: 72 RDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED 131
Query: 406 IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI---RSRPYTDY 462
++ + ++ GL +H G +RD+KPEN+L +K+ DFGL++E + Y+ +
Sbjct: 132 VKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-F 190
Query: 463 VSTRWYRAPEVL 474
T Y APEV+
Sbjct: 191 CGTVEYMAPEVV 202
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHR 422
N+VKL +++R+ + T +FEY+ ++++ L + IR +Y++L+ L + H
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 145
Query: 423 HGFFHRDMKPENLLCMGTEL--VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLHSTA 479
G HRD+KP N++ + EL +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 146 QGIMHRDVKPHNVM-IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 204
Query: 480 YSAPIHL 486
Y + +
Sbjct: 205 YDYSLDM 211
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 355 RKSLKKLS---HANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMM 410
RK ++ +S H LV L + +++ + ++E+M L++ + D + E M
Sbjct: 202 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYM 261
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLL--CMGTELVKIADFGLAREIRSRPYTDYVS-TRW 467
QV +GL MH + + H D+KPEN++ + +K+ DFGL + + + T
Sbjct: 262 RQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE 321
Query: 468 YRAPEV 473
+ APEV
Sbjct: 322 FAAPEV 327
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHR 422
N+VKL +++R+ + T +FEY+ ++++ L + IR +Y++L+ L + H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 143
Query: 423 HGFFHRDMKPENLLCMGTEL--VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLHSTA 479
G HRD+KP N++ + EL +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 144 QGIMHRDVKPHNVM-IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 480 YSAPIHL 486
Y + +
Sbjct: 203 YDYSLDM 209
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 85/167 (50%), Gaps = 21/167 (12%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHR 422
N+VKL +++R+ + T +FEY+ ++++ L + IR +Y++L+ L + H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 143
Query: 423 HGFFHRDMKPENLLCMGTEL--VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLHSTA 479
G HRD+KP N++ + EL +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 144 QGIMHRDVKPHNVM-IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 480 YSAPIHLS-----------RSQQFLFYSIDHVPPIQTTCLLAGTERL 515
Y + + R + F FY D+ + + GT+ L
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPF-FYGHDNHDQLVKIAKVLGTDGL 248
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHR 422
N+VKL +++R+ + T +FEY+ ++++ L + IR +Y++L+ L + H
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 144
Query: 423 HGFFHRDMKPENLLCMGTEL--VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLHSTA 479
G HRD+KP N++ + EL +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 145 QGIMHRDVKPHNVM-IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 203
Query: 480 YSAPIHL 486
Y + +
Sbjct: 204 YDYSLDM 210
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 379 LYFVFEYMKEN-LYQLIRDR-DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLL 436
L + E M+ L+ I++R D+ E +M + + F+H H HRD+KPENLL
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 141
Query: 437 CMGTE---LVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
E ++K+ DFG A+E T +Y APEVL
Sbjct: 142 YTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVL 182
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 379 LYFVFEYMKEN-LYQLIRDR-DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLL 436
L + E M+ L+ I++R D+ E +M + + F+H H HRD+KPENLL
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160
Query: 437 CMGTE---LVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
E ++K+ DFG A+E T +Y APEVL
Sbjct: 161 YTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVL 201
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 53/158 (33%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 334 QDNHILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQ 392
Q HI SR + + C H N+++L E E D Y VFE M+ ++
Sbjct: 49 QPGHIRSRVFREVEMLYQC--------QGHRNVLELIEFFEEEDRFYLVFEKMRGGSILS 100
Query: 393 LIRDRDKF--LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCM---GTELVKIAD 447
I R F L S++ + V L F+H G HRD+KPEN+LC VKI D
Sbjct: 101 HIHKRRHFNELEASVV---VQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICD 157
Query: 448 FGLAREIRSRPYTDYVSTRWYRAPEVLL--HSTAYSAP 483
FGL I+ +ST PE+L S Y AP
Sbjct: 158 FGLGSGIKLNGDCSPIST-----PELLTPCGSAEYMAP 190
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
++ L+ ++ LVKL+ ++N LY V EY+ ++ +R +F E R Q+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQI 150
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
+ ++H +RD+KPENLL +++ DFG A+ ++ R + T APE+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-LCGTPEALAPEI 209
Query: 474 LLHSTAYSAPI 484
+L S Y+ +
Sbjct: 210 IL-SKGYNKAV 219
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 355 RKSLKKLS---HANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMM 410
RK ++ +S H LV L + +++ + ++E+M L++ + D + E M
Sbjct: 96 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYM 155
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLL--CMGTELVKIADFGLAREIRSRPYTDYVS-TRW 467
QV +GL MH + + H D+KPEN++ + +K+ DFGL + + + T
Sbjct: 156 RQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE 215
Query: 468 YRAPEV 473
+ APEV
Sbjct: 216 FAAPEV 221
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N++ L+ V+ ++ + V EYM+ +L ++ D + M+ + G
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAG 136
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------VSTRWYRA 470
+ ++ G+ HRD+ N+L + K++DFGL+R + P Y + RW A
Sbjct: 137 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TA 195
Query: 471 PEVL 474
PE +
Sbjct: 196 PEAI 199
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 401 LPESIIRNMMYQVLQGLAFM-HRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
+PE I+ + V++GL ++ +H HRD+KP N+L +K+ DFG++ ++
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160
Query: 460 TDYVSTRWYRAPEVLLHSTAYS 481
+V TR Y +PE L T YS
Sbjct: 161 NSFVGTRSYMSPE-RLQGTHYS 181
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 403 ESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTEL--VKIADFGLAREIRSRPYT 460
E +I N+M Q+ L ++H G HRD+KPEN L + +K+ DFGL++E
Sbjct: 167 EKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG 226
Query: 461 DY------VSTRWYRAPEVL 474
+Y T ++ APEVL
Sbjct: 227 EYYGMTTKAGTPYFVAPEVL 246
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 352 CFYRKSLKKLSHAN---LVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIR 407
F+ + ++ AN +V+L +++ LY V EYM +L L+ + D +PE R
Sbjct: 114 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWAR 171
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG----LAREIRSRPYTDYV 463
+V+ L +H GF HRD+KP+N+L + +K+ADFG + +E R T V
Sbjct: 172 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AV 230
Query: 464 STRWYRAPEVL 474
T Y +PEVL
Sbjct: 231 GTPDYISPEVL 241
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 352 CFYRKSLKKLSHAN---LVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIR 407
F+ + ++ AN +V+L +++ LY V EYM +L L+ + D +PE R
Sbjct: 119 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWAR 176
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG----LAREIRSRPYTDYV 463
+V+ L +H GF HRD+KP+N+L + +K+ADFG + +E R T V
Sbjct: 177 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AV 235
Query: 464 STRWYRAPEVL 474
T Y +PEVL
Sbjct: 236 GTPDYISPEVL 246
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 358 LKKLSHANLVKLKEVI--RENDTLYFVFEYMKENLYQLIRDR-DKFLPESIIRNMMYQVL 414
L++L H N+++L +V+ E +Y V EY + +++ +K P Q++
Sbjct: 60 LRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLI 119
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI 454
GL ++H G H+D+KP NLL +KI+ G+A +
Sbjct: 120 DGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 8/149 (5%)
Query: 362 SHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQGLAFM 420
H +++ L + + ++ VF+ M++ L+ + ++ L E R++M +L+ ++F+
Sbjct: 158 GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA-LSEKETRSIMRSLLEAVSFL 216
Query: 421 HRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLHST- 478
H + HRD+KPEN+L ++++DFG + + + T Y APE+L S
Sbjct: 217 HANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMD 276
Query: 479 ----AYSAPIHLSRSQQFLFYSIDHVPPI 503
Y + L LF + PP
Sbjct: 277 ETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 352 CFYRKSLKKLSHAN---LVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIR 407
F+ + ++ AN +V+L +++ LY V EYM +L L+ + D +PE R
Sbjct: 119 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWAR 176
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG----LAREIRSRPYTDYV 463
+V+ L +H GF HRD+KP+N+L + +K+ADFG + +E R T V
Sbjct: 177 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AV 235
Query: 464 STRWYRAPEVL 474
T Y +PEVL
Sbjct: 236 GTPDYISPEVL 246
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 376 NDTLYFVFEYMKEN-LYQLIRD-RDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPE 433
+D L+ V E+ + LI++ + L E I + ++L+GL+ +H+H HRD+K +
Sbjct: 99 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQ 158
Query: 434 NLLCMGTELVKIADFGLAREIR---SRPYTDYVSTRWYRAPEVL 474
N+L VK+ DFG++ ++ R T ++ T ++ APEV+
Sbjct: 159 NVLLTENAEVKLVDFGVSAQLDRTVGRRNT-FIGTPYWMAPEVI 201
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQGL 417
+ L H N+V+ KEVI L V EY L++ I + +F E R Q++ G+
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF-SEDEARFFFQQLISGV 128
Query: 418 AFMHRHGFFHRDMKPENLLCMGTEL--VKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
++ H HRD+K EN L G+ +KI FG ++ + S+P + V T Y APEV
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKS-TVGTPAYIAPEV 187
Query: 474 LL 475
LL
Sbjct: 188 LL 189
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 15/130 (11%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMK----ENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
N++ L +++++ + T VFE++ + LYQ + D D IR MY++L+ L
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-------IRFYMYEILKALD 145
Query: 419 FMHRHGFFHRDMKPENLLCMGTEL-VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLH 476
+ H G HRD+KP N+L +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 146 YCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 477 STAYSAPIHL 486
Y + +
Sbjct: 206 YQMYDYSLDM 215
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 346 RDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESI 405
RD + R L +++H +VKL + LY + ++++ ++ E
Sbjct: 68 RDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED 127
Query: 406 IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI--RSRPYTDYV 463
++ + ++ L +H G +RD+KPEN+L +K+ DFGL++E + +
Sbjct: 128 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC 187
Query: 464 STRWYRAPEVL 474
T Y APEV+
Sbjct: 188 GTVEYMAPEVV 198
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 346 RDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESI 405
RD + R L +++H +VKL + LY + ++++ ++ E
Sbjct: 69 RDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED 128
Query: 406 IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI--RSRPYTDYV 463
++ + ++ L +H G +RD+KPEN+L +K+ DFGL++E + +
Sbjct: 129 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC 188
Query: 464 STRWYRAPEVL 474
T Y APEV+
Sbjct: 189 GTVEYMAPEVV 199
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 24/122 (19%)
Query: 383 FEYMKENLYQLIRDRDKFLPESI--IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGT 440
FE + + + ++D + +LP I +R+M +Q+ Q + F+H + H D+KPEN+L + +
Sbjct: 115 FELLGLSTFDFLKD-NNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNS 173
Query: 441 E-------------------LVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAYS 481
+ V++ DFG A ++ VSTR YRAPEV+L +S
Sbjct: 174 DYELTYNLEKKRDERSVKSTAVRVVDFGSA-TFDHEHHSTIVSTRHYRAPEVIL-ELGWS 231
Query: 482 AP 483
P
Sbjct: 232 QP 233
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 15/125 (12%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMK----ENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
N++ L +++++ + T VFE++ + LYQ + D D IR MY++L+ L
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-------IRFYMYEILKALD 145
Query: 419 FMHRHGFFHRDMKPENLLCMGTEL-VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLH 476
+ H G HRD+KP N++ +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 477 STAYS 481
Y
Sbjct: 206 YQMYD 210
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ ++ + V E M+ L +R D + M+ + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------VSTRWYRA 470
+ ++ G HRD+ N+L + K++DFGL+R + P Y + RW +
Sbjct: 160 MKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 471 PEVLLHSTAYSA 482
PE + + SA
Sbjct: 219 PEAIAYRKFTSA 230
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 15/125 (12%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMK----ENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
N++ L +++++ + T VFE++ + LYQ + D D IR MY++L+ L
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-------IRFYMYEILKALD 145
Query: 419 FMHRHGFFHRDMKPENLLCMGTEL-VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLH 476
+ H G HRD+KP N++ +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 477 STAYS 481
Y
Sbjct: 206 YQMYD 210
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 365 NLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHG 424
N+++L E ++ Y VFE ++ + K E ++ V L F+H G
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKG 131
Query: 425 FFHRDMKPENLLCMGTEL---VKIADFGLAR---------EIRSRPYTDYVSTRWYRAPE 472
HRD+KPEN+LC E VKI DF L I + T + Y APE
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 473 VLL----HSTAYSAPIHLSRSQQFLFYSIDHVPPIQTTC 507
V+ +T Y L L+ + PP C
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHC 230
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 375 ENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPE 433
+N L+ V EY + +IR R+K L E I ++ L+GL ++H HRD+K
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAG 154
Query: 434 NLLCMGTELVKIADFGLAREIRSR--PYTDYVSTRWYRAPEVL 474
N+L K+ADFG+A ++ + T ++ APEV+
Sbjct: 155 NILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVI 197
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIR-DRDKFLPESIIRNMMYQVLQG 416
L H +VKL + L+ + E+ I + D+ L E I+ + Q+L+
Sbjct: 70 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA 129
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGL-AREIRSRPYTD-YVSTRWYRAPEVL 474
L F+H HRD+K N+L +++ADFG+ A+ +++ D ++ T ++ APEV+
Sbjct: 130 LNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVV 189
Query: 475 LHSTAYSAP 483
+ T P
Sbjct: 190 MCETMKDTP 198
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 15/130 (11%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMK----ENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
N++ L +++++ + T VFE++ + LYQ + D D IR MY++L+ L
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-------IRFYMYEILKALD 144
Query: 419 FMHRHGFFHRDMKPENLLCMGTEL-VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLH 476
+ H G HRD+KP N++ +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 145 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 204
Query: 477 STAYSAPIHL 486
Y + +
Sbjct: 205 YQMYDYSLDM 214
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 15/125 (12%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMK----ENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
N++ L +++++ + T VFE++ + LYQ + D D IR MY++L+ L
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-------IRFYMYEILKALD 145
Query: 419 FMHRHGFFHRDMKPENLLCMGTEL-VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLH 476
+ H G HRD+KP N++ +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 477 STAYS 481
Y
Sbjct: 206 YQMYD 210
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 15/125 (12%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMK----ENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
N++ L +++++ + T VFE++ + LYQ + D D IR MY++L+ L
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-------IRFYMYEILKALD 145
Query: 419 FMHRHGFFHRDMKPENLLCMGTEL-VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLH 476
+ H G HRD+KP N++ +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 477 STAYS 481
Y
Sbjct: 206 YQMYD 210
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 15/125 (12%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMK----ENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
N++ L +++++ + T VFE++ + LYQ + D D IR MY++L+ L
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-------IRFYMYEILKALD 144
Query: 419 FMHRHGFFHRDMKPENLLCMGTEL-VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLH 476
+ H G HRD+KP N++ +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 145 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 204
Query: 477 STAYS 481
Y
Sbjct: 205 YQMYD 209
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 15/125 (12%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMK----ENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
N++ L +++++ + T VFE++ + LYQ + D D IR MY++L+ L
Sbjct: 98 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-------IRFYMYEILKALD 150
Query: 419 FMHRHGFFHRDMKPENLLCMGTEL-VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLH 476
+ H G HRD+KP N++ +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 151 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 210
Query: 477 STAYS 481
Y
Sbjct: 211 YQMYD 215
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 15/130 (11%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMK----ENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
N++ L +++++ + T VFE++ + LYQ + D D IR MY++L+ L
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-------IRFYMYEILKALD 145
Query: 419 FMHRHGFFHRDMKPENLLCMGTEL-VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLH 476
+ H G HRD+KP N++ +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 477 STAYSAPIHL 486
Y + +
Sbjct: 206 YQMYDYSLDM 215
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 15/130 (11%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMK----ENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
N++ L +++++ + T VFE++ + LYQ + D D IR MY++L+ L
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-------IRFYMYEILKALD 145
Query: 419 FMHRHGFFHRDMKPENLLCMGTEL-VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLH 476
+ H G HRD+KP N++ +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 477 STAYSAPIHL 486
Y + +
Sbjct: 206 YQMYDYSLDM 215
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 15/130 (11%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMK----ENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
N++ L +++++ + T VFE++ + LYQ + D D IR MY++L+ L
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-------IRFYMYEILKALD 145
Query: 419 FMHRHGFFHRDMKPENLLCMGTEL-VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLH 476
+ H G HRD+KP N++ +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 477 STAYSAPIHL 486
Y + +
Sbjct: 206 YQMYDYSLDM 215
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK++ H N++ L EV + + E + L+ + +++ L E + Q+L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNG 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +KI DFGLA +I + + T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 472 EVL 474
E++
Sbjct: 187 EIV 189
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 15/125 (12%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMK----ENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
N++ L +++++ + T VFE++ + LYQ + D D IR MY++L+ L
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-------IRFYMYEILKALD 145
Query: 419 FMHRHGFFHRDMKPENLLCMGTEL-VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLH 476
+ H G HRD+KP N++ +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 477 STAYS 481
Y
Sbjct: 206 YQMYD 210
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
++ H N+V + D L+ V E+++ I + + E I + VL+ L
Sbjct: 96 MRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIATVCLSVLRAL 154
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFG----LAREIRSRPYTDYVSTRWYRAPEV 473
+++H G HRD+K +++L +K++DFG +++E+ R V T ++ APEV
Sbjct: 155 SYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR--KXLVGTPYWMAPEV 212
Query: 474 LLHSTAYSAPIHLSRSQQFLFYSIDHVPPIQTTCLLAGTERLKSS 518
+ Y + + + ID PP L R++ S
Sbjct: 213 -ISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDS 256
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 15/125 (12%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMK----ENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
N++ L +++++ + T VFE++ + LYQ + D D IR MY++L+ L
Sbjct: 91 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-------IRFYMYEILKALD 143
Query: 419 FMHRHGFFHRDMKPENLLCMGTEL-VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLH 476
+ H G HRD+KP N++ +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 144 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 203
Query: 477 STAYS 481
Y
Sbjct: 204 YQMYD 208
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 15/125 (12%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMK----ENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
N++ L +++++ + T VFE++ + LYQ + D D IR MY++L+ L
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-------IRFYMYEILKALD 145
Query: 419 FMHRHGFFHRDMKPENLLCMGTEL-VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLH 476
+ H G HRD+KP N++ +++ D+GLA + Y V++R+++ PE+L+
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 477 STAYS 481
Y
Sbjct: 206 YQMYD 210
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 8/126 (6%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMH 421
H N++ L E + L +FE++ ++++ I L E I + ++QV + L F+H
Sbjct: 60 HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 422 RHGFFHRDMKPENLL--CMGTELVKIADFGLAREIRSRPYTDY---VSTRWYRAPEVLLH 476
H H D++PEN++ + +KI +FG AR++ +P ++ + Y APEV H
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL--KPGDNFRLLFTAPEYYAPEVHQH 177
Query: 477 STAYSA 482
+A
Sbjct: 178 DVVSTA 183
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 67/121 (55%), Gaps = 7/121 (5%)
Query: 365 NLVKLKEVIRE--NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHR 422
N++ L +++++ + T VFE++ ++ +R + L + IR MY++L+ L + H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLR---QTLTDYDIRFYMYEILKALDYCHS 149
Query: 423 HGFFHRDMKPENLLCMGTEL-VKIADFGLAREIR-SRPYTDYVSTRWYRAPEVLLHSTAY 480
G HRD+KP N++ +++ D+GLA + Y V++R+++ PE+L+ Y
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 209
Query: 481 S 481
Sbjct: 210 D 210
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 52.8 bits (125), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 12/133 (9%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
K L H N++ L+ V + L V E+ + + K +P I+ N Q+ +
Sbjct: 58 KLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIAR 116
Query: 416 GLAFMHRHGF---FHRDMKPENLLCM--------GTELVKIADFGLAREIRSRPYTDYVS 464
G+ ++H HRD+K N+L + +++KI DFGLARE
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAG 176
Query: 465 TRWYRAPEVLLHS 477
+ APEV+ S
Sbjct: 177 AYAWMAPEVIRAS 189
Score = 31.6 bits (70), Expect = 2.1, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 57 REVKSLKKLSHANLVKLKEVILDPP---LHAYFQVGGPTTRVTSLKR 100
+E K L H N++ L+ V L P L F GGP RV S KR
Sbjct: 55 QEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR 101
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 338 ILSRHVSSRDEMVVC--FYRKSLKKLSHAN-LVKLKEVIRENDTLYFVFEYMKE-NLYQL 393
IL + V +D+ V C ++ L L L +L + D LYFV EY+ +L
Sbjct: 51 ILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYH 110
Query: 394 IRDRDKFL-PESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
I+ KF P+++ ++ GL F+H+ G +RD+K +N++ +KIADFG+ +
Sbjct: 111 IQQVGKFKEPQAVF--YAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK 168
Query: 453 EIRSRPYT--DYVSTRWYRAPEVLLHS 477
E T ++ T Y APE++ +
Sbjct: 169 EHMMDGVTTREFCGTPDYIAPEIIAYQ 195
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+ L+ H L LK + +D L FV EY R++ E R +++
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVS 116
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT--DYVSTRWYRAPEV 473
L ++H +RD+K ENL+ +KI DFGL +E S T + T Y APEV
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 176
Query: 474 L 474
L
Sbjct: 177 L 177
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Query: 376 NDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPEN 434
D L+ V EY+ L ++ + + E I + + LQ L F+H + HRD+K +N
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 146
Query: 435 LLCMGTELVKIADFGLAREI--RSRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQF 492
+L VK+ DFG +I ++ V T ++ APEV+ AY + +
Sbjct: 147 ILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIM 205
Query: 493 LFYSIDHVPP 502
I+ PP
Sbjct: 206 AIEMIEGEPP 215
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N++ L+ V+ + + + EYM+ +L +R D + M+ + G
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 122
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------VSTRWYRA 470
+ ++ + HRD+ N+L + K++DFG++R + P Y + RW A
Sbjct: 123 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW-TA 181
Query: 471 PEVLLHSTAYSA 482
PE + + SA
Sbjct: 182 PEAIAYRKFTSA 193
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N++ L+ V+ + + + EYM+ +L +R D + M+ + G
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 128
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------VSTRWYRA 470
+ ++ + HRD+ N+L + K++DFG++R + P Y + RW A
Sbjct: 129 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW-TA 187
Query: 471 PEVLLHSTAYSA 482
PE + + SA
Sbjct: 188 PEAIAYRKFTSA 199
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 380 YFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCM 438
Y V EY+ L ++ P+ I ++ Q L F H++G HRD+KP N+L
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIE-VIADACQALNFSHQNGIIHRDVKPANILIS 150
Query: 439 GTELVKIADFGLAREI 454
T VK+ DFG+AR I
Sbjct: 151 ATNAVKVVDFGIARAI 166
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+ L+ H L LK + +D L FV EY R++ E R +++
Sbjct: 60 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVS 119
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT--DYVSTRWYRAPEV 473
L ++H +RD+K ENL+ +KI DFGL +E S T + T Y APEV
Sbjct: 120 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 179
Query: 474 L 474
L
Sbjct: 180 L 180
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+ L+ H L LK + +D L FV EY R++ E R +++
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVS 116
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT--DYVSTRWYRAPEV 473
L ++H +RD+K ENL+ +KI DFGL +E S T + T Y APEV
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 474 L 474
L
Sbjct: 177 L 177
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+ L+ H L LK + +D L FV EY R++ E R +++
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVS 116
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT--DYVSTRWYRAPEV 473
L ++H +RD+K ENL+ +KI DFGL +E S T + T Y APEV
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 176
Query: 474 L 474
L
Sbjct: 177 L 177
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+ L+ H L LK + +D L FV EY R++ E R +++
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVS 116
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT--DYVSTRWYRAPEV 473
L ++H +RD+K ENL+ +KI DFGL +E S T + T Y APEV
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 474 L 474
L
Sbjct: 177 L 177
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE--NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
L ++ HAN++K+ ++ V E +L+ I DR L E + + Q++
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFI-DRHPRLDEPLASYIFRQLVS 141
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI-RSRPYTDYVSTRWYRAPEVL 474
+ ++ HRD+K EN++ +K+ DFG A + R + + + T Y APEVL
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVL 201
Query: 475 LHSTAYSAP 483
+ Y P
Sbjct: 202 M-GNPYRGP 209
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK++ H N++ L EV + + E + L+ + +++ L E + Q+L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNG 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +KI DFGLA +I + + T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 472 EVL 474
E++
Sbjct: 187 EIV 189
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK++ H N++ L EV + + E + L+ + +++ L E + Q+L G
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNG 125
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +KI DFGLA +I + + T + AP
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185
Query: 472 EVL 474
E++
Sbjct: 186 EIV 188
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 30/160 (18%)
Query: 356 KSLKKLSHANLVKLKEVIRENDT------------LYFVFEYM-KENLYQLIRDRDKF-- 400
K+L KL H +V+ E +T LY + KENL + R
Sbjct: 55 KALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEE 114
Query: 401 LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRP-- 458
S+ ++ Q+ + + F+H G HRD+KP N+ ++VK+ DFGL +
Sbjct: 115 RERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
Query: 459 ------------YTDYVSTRWYRAPEVLLHSTAYSAPIHL 486
+T V T+ Y +PE +H +YS + +
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPE-QIHGNSYSHKVDI 213
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD----------KFLPESIIR---- 407
H N++ L ++ LY + EY K NL + +R R +PE +
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 408 -NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TD 461
+ YQ+ +G+ ++ HRD+ N+L ++KIADFGLAR+I + Y
Sbjct: 206 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 266 RLPVKWM-APEALF 278
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
L+++ H N++ L ++ + + E + L+ + +++ L E + Q+L G
Sbjct: 83 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDG 141
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIRS-RPYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +K+ DFG+A +I + + + T + AP
Sbjct: 142 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 201
Query: 472 EVL 474
E++
Sbjct: 202 EIV 204
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQV 413
R L ++H ++++ ++ ++ + +Y++ L+ L+R +F P + + +V
Sbjct: 57 RLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRF-PNPVAKFYAAEV 115
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
L ++H +RD+KPEN+L +KI DFG A+ + Y T Y APEV
Sbjct: 116 CLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYX-LCGTPDYIAPEV 174
Query: 474 L 474
+
Sbjct: 175 V 175
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK++ H N++ L EV + + E + L+ + +++ L E + Q+L G
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNG 125
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +KI DFGLA +I + + T + AP
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185
Query: 472 EVL 474
E++
Sbjct: 186 EIV 188
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK++ H N++ L EV + + E + L+ + +++ L E + Q+L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNG 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +KI DFGLA +I + + T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 472 EVL 474
E++
Sbjct: 187 EIV 189
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK++ H N++ L EV + + E + L+ + +++ L E + Q+L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNG 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +KI DFGLA +I + + T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 472 EVL 474
E++
Sbjct: 187 EIV 189
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK++ H N++ L EV + + E + L+ + +++ L E + Q+L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNG 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +KI DFGLA +I + + T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 472 EVL 474
E++
Sbjct: 187 EIV 189
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 366 LVKLKEVIRENDTLYFVFEYMKENLYQLIRDRD-KFLPESIIRNMMYQVLQGLAFMH--R 422
+V LK + L VFE + NLY L+R+ + + + ++ R Q+ L F+
Sbjct: 99 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPE 158
Query: 423 HGFFHRDMKPENLLCMGTE--LVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLL 475
H D+KPEN+L + +KI DFG + ++ R Y + +R+YR+PEVLL
Sbjct: 159 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ-XIQSRFYRSPEVLL 212
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK++ H N++ L EV + + E + L+ + +++ L E + Q+L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNG 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +KI DFGLA +I + + T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 472 EVL 474
E++
Sbjct: 187 EIV 189
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK++ H N++ L EV + + E + L+ + +++ L E + Q+L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNG 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +KI DFGLA +I + + T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAP 186
Query: 472 EVL 474
E++
Sbjct: 187 EIV 189
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK++ H N++ L EV + + E + L+ + +++ L E + Q+L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNG 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +KI DFGLA +I + + T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 472 EVL 474
E++
Sbjct: 187 EIV 189
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 366 LVKLKEVIRENDTLYFVFEYMKENLYQLIRDRD-KFLPESIIRNMMYQVLQGLAFMH--R 422
+V LK + L VFE + NLY L+R+ + + + ++ R Q+ L F+
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPE 177
Query: 423 HGFFHRDMKPENLLCMGTE--LVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLL 475
H D+KPEN+L + +KI DFG + ++ R Y + +R+YR+PEVLL
Sbjct: 178 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ-XIQSRFYRSPEVLL 231
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK++ H N++ L EV + + E + L+ + +++ L E + Q+L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNG 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +KI DFGLA +I + + T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 472 EVL 474
E++
Sbjct: 187 EIV 189
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK++ H N++ L EV + + E + L+ + +++ L E + Q+L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNG 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +KI DFGLA +I + + T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 472 EVL 474
E++
Sbjct: 187 EIV 189
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 124
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S TD T Y PE++
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI 179
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 366 LVKLKEVIRENDTLYFVFEYMKENLYQLIRDRD-KFLPESIIRNMMYQVLQGLAFMH--R 422
+V LK + L VFE + NLY L+R+ + + + ++ R Q+ L F+
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPE 177
Query: 423 HGFFHRDMKPENLLCMGTE--LVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLL 475
H D+KPEN+L + +KI DFG + ++ R Y + +R+YR+PEVLL
Sbjct: 178 LSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQ-XIQSRFYRSPEVLL 231
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
L+++ H N++ L ++ + + E + L+ + +++ L E + Q+L G
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDG 120
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIRS-RPYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +K+ DFG+A +I + + + T + AP
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 180
Query: 472 EVL 474
E++
Sbjct: 181 EIV 183
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIR-DRDKFLPESIIRNMMYQVLQG 416
L H +VKL + L+ + E+ I + D+ L E I+ + Q+L+
Sbjct: 62 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA 121
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGL-AREIRSRPYTD-YVSTRWYRAPEVL 474
L F+H HRD+K N+L +++ADFG+ A+ +++ D ++ T ++ APEV+
Sbjct: 122 LNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVV 181
Query: 475 LHSTAYSAP 483
+ T P
Sbjct: 182 MCETMKDTP 190
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 69/158 (43%), Gaps = 24/158 (15%)
Query: 334 QDNHILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQ 392
Q HI SR + + C H N+++L E E D Y VFE M+ ++
Sbjct: 49 QPGHIRSRVFREVEMLYQC--------QGHRNVLELIEFFEEEDRFYLVFEKMRGGSILS 100
Query: 393 LIRDRDKF--LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCM---GTELVKIAD 447
I R F L S++ + V L F+H G HRD+KPEN+LC VKI D
Sbjct: 101 HIHKRRHFNELEASVV---VQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICD 157
Query: 448 FGLAREIRSRPYTDYVSTRWYRAPEVLL--HSTAYSAP 483
F L I+ +ST PE+L S Y AP
Sbjct: 158 FDLGSGIKLNGDCSPIST-----PELLTPCGSAEYMAP 190
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
L+++ H N++ L ++ + + E + L+ + +++ L E + Q+L G
Sbjct: 69 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDG 127
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIRS-RPYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +K+ DFG+A +I + + + T + AP
Sbjct: 128 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 187
Query: 472 EVL 474
E++
Sbjct: 188 EIV 190
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 380 YFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCM 438
Y V EY+ L ++ P+ I ++ Q L F H++G HRD+KP N++
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGPMTPKRAIE-VIADACQALNFSHQNGIIHRDVKPANIMIS 167
Query: 439 GTELVKIADFGLAREI 454
T VK+ DFG+AR I
Sbjct: 168 ATNAVKVMDFGIARAI 183
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
++ H N+V++ D L+ V E+++ I + + E I + VLQ L
Sbjct: 71 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQAL 129
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFG----LAREIRSRPYTDYVSTRWYRAPEV 473
+ +H G HRD+K +++L VK++DFG +++E+ R V T ++ APE
Sbjct: 130 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPE- 186
Query: 474 LLHSTAYSAPIHLSRSQQFLFYSIDHVPP 502
L+ Y + + + +D PP
Sbjct: 187 LISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK++ H N++ L EV + + E + L+ + +++ L E + Q+L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNG 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +KI DFGLA +I + + T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 472 EVL 474
E++
Sbjct: 187 EIV 189
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+ L+ H L LK + +D L FV EY R++ E R +++
Sbjct: 62 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVS 121
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT--DYVSTRWYRAPEV 473
L ++H +RD+K ENL+ +KI DFGL +E S T + T Y APEV
Sbjct: 122 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 181
Query: 474 L 474
L
Sbjct: 182 L 182
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 401 LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY- 459
L E+ I ++ ++L+GL ++H HRD+K N+L VK+ADFG+A ++
Sbjct: 121 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 180
Query: 460 -TDYVSTRWYRAPEVLLHSTAYSA 482
+V T ++ APEV+ S AY +
Sbjct: 181 RNTFVGTPFWMAPEVIKQS-AYDS 203
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 128
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S TD T Y PE++
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI 183
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+ L+ H L LK + +D L FV EY R++ E R +++
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVS 116
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT--DYVSTRWYRAPEV 473
L ++H +RD+K ENL+ +KI DFGL +E S T + T Y APEV
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 474 L 474
L
Sbjct: 177 L 177
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 123
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S TD T Y PE++
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI 178
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Query: 350 VVCFY--RKSLKKLSHANLVKLKEVIRENDTLYFVFEY-MKENLYQLIRDRDKFLPESII 406
V CF R L + +L ++ + LY V EY + +L L+ + +P +
Sbjct: 105 VSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMA 164
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD---YV 463
R + +++ + +HR G+ HRD+KP+N+L +++ADFG ++R+ V
Sbjct: 165 RFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV 224
Query: 464 STRWYRAPEVL 474
T Y +PE+L
Sbjct: 225 GTPDYLSPEIL 235
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 123
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S TD T Y PE++
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI 178
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 348 EMVVCFYRKSL--KKLSHANLVKLKEVIRENDTL-YFVFEYM-KENLYQLIRDRDKFLPE 403
+ V F R+ L + L+H N++ L ++ + L + + YM +L Q IR +
Sbjct: 64 QQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV 123
Query: 404 SIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYV 463
+ + QV +G+ ++ F HRD+ N + + VK+ADFGLAR+I R Y
Sbjct: 124 KDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQ 183
Query: 464 STRWYRAP 471
R R P
Sbjct: 184 QHRHARLP 191
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD----------KFLPESIIR---- 407
H N++ L ++ LY + EY K NL + +R R +PE +
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 408 -NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVS-- 464
+ YQ+ +G+ ++ HRD+ N+L ++KIADFGLAR+I + Y +
Sbjct: 152 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 465 ---TRWYRAPEVLL 475
+W APE L
Sbjct: 212 RLPVKWM-APEALF 224
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 346 RDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESI 405
RD + R L +++H +VKL + LY + ++++ ++ E
Sbjct: 68 RDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED 127
Query: 406 IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI---RSRPYTDY 462
++ + ++ L +H G +RD+KPEN+L +K+ DFGL++E + Y+ +
Sbjct: 128 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-F 186
Query: 463 VSTRWYRAPEVL 474
T Y APEV+
Sbjct: 187 CGTVEYMAPEVV 198
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 401 LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY- 459
L E+ I ++ ++L+GL ++H HRD+K N+L VK+ADFG+A ++
Sbjct: 116 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175
Query: 460 -TDYVSTRWYRAPEVLLHSTAYSA 482
+V T ++ APEV+ S AY +
Sbjct: 176 RNXFVGTPFWMAPEVIKQS-AYDS 198
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 401 LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY- 459
L E+ I ++ ++L+GL ++H HRD+K N+L VK+ADFG+A ++
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 460 -TDYVSTRWYRAPEVLLHSTAYSA 482
+V T ++ APEV+ S AY +
Sbjct: 161 RNXFVGTPFWMAPEVIKQS-AYDS 183
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 380 YFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCM 438
Y V EY+ L ++ P+ I ++ Q L F H++G HRD+KP N++
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIE-VIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 439 GTELVKIADFGLAREI 454
T VK+ DFG+AR I
Sbjct: 151 ATNAVKVMDFGIARAI 166
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
++ H N+V++ D L+ V E+++ I + + E I + VLQ L
Sbjct: 202 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQAL 260
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFG----LAREIRSRPYTDYVSTRWYRAPEV 473
+ +H G HRD+K +++L VK++DFG +++E+ R V T ++ APE
Sbjct: 261 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPE- 317
Query: 474 LLHSTAYSAPIHLSRSQQFLFYSIDHVPP 502
L+ Y + + + +D PP
Sbjct: 318 LISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 380 YFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCM 438
Y V EY+ L ++ P+ I ++ Q L F H++G HRD+KP N++
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIE-VIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 439 GTELVKIADFGLAREI 454
T VK+ DFG+AR I
Sbjct: 151 ATNAVKVMDFGIARAI 166
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 401 LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY- 459
L E+ I ++ ++L+GL ++H HRD+K N+L VK+ADFG+A ++
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 460 -TDYVSTRWYRAPEVLLHSTAYSA 482
+V T ++ APEV+ S AY +
Sbjct: 161 RNTFVGTPFWMAPEVIKQS-AYDS 183
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 376 NDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPEN 434
D L+ V EY+ L ++ + + E I + + LQ L F+H + HRD+K +N
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 147
Query: 435 LLCMGTELVKIADFGLAREI--RSRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQF 492
+L VK+ DFG +I + V T ++ APEV+ AY + +
Sbjct: 148 ILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIM 206
Query: 493 LFYSIDHVPP 502
I+ PP
Sbjct: 207 AIEMIEGEPP 216
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 9/121 (7%)
Query: 372 VIRENDTLYFVFEYMK--------ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRH 423
+I D +Y ++EYM+ E + L ++ F+P +I+ ++ VL +++H
Sbjct: 111 IITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE 170
Query: 424 -GFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAYSA 482
HRD+KP N+L VK++DFG + + + T + PE + ++Y+
Sbjct: 171 KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNG 230
Query: 483 P 483
Sbjct: 231 A 231
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 376 NDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPEN 434
D L+ V EY+ L ++ + + E I + + LQ L F+H + HRD+K +N
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 146
Query: 435 LLCMGTELVKIADFGLAREI--RSRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQF 492
+L VK+ DFG +I + V T ++ APEV+ AY + +
Sbjct: 147 ILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIM 205
Query: 493 LFYSIDHVPP 502
I+ PP
Sbjct: 206 AIEMIEGEPP 215
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD----------KFLPESIIR---- 407
H N++ L ++ LY + EY K NL + +R R +PE +
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 408 -NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVS-- 464
+ YQ+ +G+ ++ HRD+ N+L ++KIADFGLAR+I + Y +
Sbjct: 149 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 465 ---TRWYRAPEVLL 475
+W APE L
Sbjct: 209 RLPVKWM-APEALF 221
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD----------KFLPES--IIRNM 409
H N++ L ++ LY + EY K NL + +R R +PE +++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 410 M---YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TD 461
+ YQ+ +G+ ++ HRD+ N+L ++KIADFGLAR+I + Y
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 220 RLPVKWM-APEALF 232
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
++ H N+V++ D L+ V E+++ I + + E I + VLQ L
Sbjct: 125 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQAL 183
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFG----LAREIRSRPYTDYVSTRWYRAPEV 473
+ +H G HRD+K +++L VK++DFG +++E+ R V T ++ APE
Sbjct: 184 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPE- 240
Query: 474 LLHSTAYSAPIHLSRSQQFLFYSIDHVPP 502
L+ Y + + + +D PP
Sbjct: 241 LISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 376 NDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPEN 434
D L+ V EY+ L ++ + + E I + + LQ L F+H + HRD+K +N
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 146
Query: 435 LLCMGTELVKIADFGLAREI--RSRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQF 492
+L VK+ DFG +I + V T ++ APEV+ AY + +
Sbjct: 147 ILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIM 205
Query: 493 LFYSIDHVPP 502
I+ PP
Sbjct: 206 AIEMIEGEPP 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 380 YFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCM 438
Y V EY+ L ++ P+ I ++ Q L F H++G HRD+KP N++
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIE-VIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 439 GTELVKIADFGLAREI 454
T VK+ DFG+AR I
Sbjct: 151 ATNAVKVMDFGIARAI 166
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 380 YFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCM 438
Y V EY+ L ++ P+ I ++ Q L F H++G HRD+KP N++
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIE-VIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 439 GTELVKIADFGLAREI 454
T VK+ DFG+AR I
Sbjct: 151 ATNAVKVMDFGIARAI 166
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK++ H N++ L EV + + E + L+ + +++ L E + Q+L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES-LTEEEATEFLKQILNG 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +KI DFGLA +I + + T + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 472 EVL 474
E++
Sbjct: 187 EIV 189
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD----------KFLPES--IIRNM 409
H N++ L ++ LY + EY K NL + +R R +PE +++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 410 M---YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TD 461
+ YQ+ +G+ ++ HRD+ N+L ++KIADFGLAR+I + Y
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 220 RLPVKWM-APEALF 232
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 27/144 (18%)
Query: 377 DTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMY--QVLQGLAFMHRHGFFHRDMKPE 433
+ L+FV EY+ +L I+ KF + R Y +++ GL F+H G +RD+K +
Sbjct: 92 ENLFFVMEYLNGGDLMYHIQSCHKF---DLSRATFYAAEIILGLQFLHSKGIVYRDLKLD 148
Query: 434 NLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEVLL-----HSTAY------ 480
N+L +KIADFG+ +E + ++ T Y APE+LL HS +
Sbjct: 149 NILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVL 208
Query: 481 -------SAPIHLSRSQQFLFYSI 497
+P H + ++ LF+SI
Sbjct: 209 LYEMLIGQSPFH-GQDEEELFHSI 231
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 406 IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY--TDYV 463
I M+ ++L+GL ++H HRD+K N+L VK+ADFG+A ++ +V
Sbjct: 122 IATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV 181
Query: 464 STRWYRAPEVLLHSTAYSA 482
T ++ APEV+ S AY +
Sbjct: 182 GTPFWMAPEVIQQS-AYDS 199
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDR---------------DKFLPESII 406
H N++ L ++ LY + EY K NL + ++ R ++ L +
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TD 461
+ YQV +G+ ++ HRD+ N+L ++KIADFGLAR+I Y
Sbjct: 145 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 205 RLPVKWM-APEALF 217
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDR---------------DKFLPESII 406
H N++ L ++ LY + EY K NL + ++ R ++ L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TD 461
+ YQV +G+ ++ HRD+ N+L ++KIADFGLAR+I Y
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 213 RLPVKWM-APEALF 225
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD----------KFLPESIIR---- 407
H N++ L ++ LY + EY K NL + +R R +PE +
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 408 -NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVS-- 464
+ YQ+ +G+ ++ HRD+ N+L ++KIADFGLAR+I + Y +
Sbjct: 147 VSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 465 ---TRWYRAPEVLL 475
+W APE L
Sbjct: 207 RLPVKWM-APEALF 219
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDR---------------DKFLPESII 406
H N++ L ++ LY + EY K NL + ++ R ++ L +
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TD 461
+ YQV +G+ ++ HRD+ N+L ++KIADFGLAR+I Y
Sbjct: 142 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 202 RLPVKWM-APEALF 214
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 401 LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY- 459
L E+ I ++ ++L+GL ++H HRD+K N+L VK+ADFG+A ++
Sbjct: 113 LEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 172
Query: 460 -TDYVSTRWYRAPEVLLHST 478
+V T ++ APEV+ S
Sbjct: 173 RNXFVGTPFWMAPEVIKQSA 192
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDR---------------DKFLPESII 406
H N++ L ++ LY + EY K NL + ++ R ++ L +
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TD 461
+ YQV +G+ ++ HRD+ N+L ++KIADFGLAR+I Y
Sbjct: 194 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 254 RLPVKWM-APEALF 266
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDR---------------DKFLPESII 406
H N++ L ++ LY + EY K NL + ++ R ++ L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TD 461
+ YQV +G+ ++ HRD+ N+L ++KIADFGLAR+I Y
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 213 RLPVKWM-APEALF 225
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%)
Query: 377 DTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLL 436
D L F+ + M + E+ +R +++ GL MH +RD+KP N+L
Sbjct: 264 DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANIL 323
Query: 437 CMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAYSA 482
V+I+D GLA + + V T Y APEVL AY +
Sbjct: 324 LDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDS 369
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDR---------------DKFLPESII 406
H N++ L ++ LY + EY K NL + ++ R ++ L +
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TD 461
+ YQV +G+ ++ HRD+ N+L ++KIADFGLAR+I Y
Sbjct: 146 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 206 RLPVKWM-APEALF 218
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%)
Query: 377 DTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLL 436
D L F+ + M + E+ +R +++ GL MH +RD+KP N+L
Sbjct: 265 DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANIL 324
Query: 437 CMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAYSA 482
V+I+D GLA + + V T Y APEVL AY +
Sbjct: 325 LDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDS 370
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%)
Query: 377 DTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLL 436
D L F+ + M + E+ +R +++ GL MH +RD+KP N+L
Sbjct: 265 DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANIL 324
Query: 437 CMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAYSA 482
V+I+D GLA + + V T Y APEVL AY +
Sbjct: 325 LDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDS 370
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%)
Query: 377 DTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLL 436
D L F+ + M + E+ +R +++ GL MH +RD+KP N+L
Sbjct: 265 DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANIL 324
Query: 437 CMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAYSA 482
V+I+D GLA + + V T Y APEVL AY +
Sbjct: 325 LDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDS 370
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD---------------KFLPESII 406
H N++ L ++ LY + EY K NL + ++ R+ + L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TD 461
+ YQV +G+ ++ HRD+ N+L ++KIADFGLAR+I Y
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 213 RLPVKWM-APEALF 225
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDR---------------DKFLPESII 406
H N++ L ++ LY + EY K NL + ++ R ++ L +
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TD 461
+ YQV +G+ ++ HRD+ N+L ++KIADFGLAR+I Y
Sbjct: 138 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 198 RLPVKWM-APEALF 210
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQVL 414
K + K H NLV+L + D L V+ YM +L + D P S +M ++
Sbjct: 82 KVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW--HMRCKIA 139
Query: 415 QGLA----FMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT----DYVSTR 466
QG A F+H + HRD+K N+L KI+DFGLAR T V T
Sbjct: 140 QGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTT 199
Query: 467 WYRAPEVL 474
Y APE L
Sbjct: 200 AYMAPEAL 207
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQVL 414
K + K H NLV+L + D L V+ YM +L + D P S +M ++
Sbjct: 82 KVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW--HMRCKIA 139
Query: 415 QGLA----FMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT----DYVSTR 466
QG A F+H + HRD+K N+L KI+DFGLAR T V T
Sbjct: 140 QGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTT 199
Query: 467 WYRAPEVL 474
Y APE L
Sbjct: 200 AYMAPEAL 207
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD----------KFLPES--IIRNM 409
H N++ L ++ LY + EY K NL + +R R +PE +++
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 410 M---YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TD 461
+ YQ+ +G+ ++ HRD+ N+L ++KIADFGLAR+I + Y
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 220 RLPVKWM-APEALF 232
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
L+++ H N++ L +V + + E + L+ + ++ L E + + Q+L G
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDG 127
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIRSR-PYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +K+ DFGLA EI + + T + AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 472 EVL 474
E++
Sbjct: 188 EIV 190
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 16/137 (11%)
Query: 358 LKKLSHANLVKLKEVIREN--DTLYFVFEYMKENLYQ--LIRDRDKFLPESIIRNMMY-- 411
L+ L H N+VK K + E+ + + + E++ + L ++++K ++ + + Y
Sbjct: 77 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI---NLKQQLKYAV 133
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTR----- 466
Q+ +G+ ++ + HRD+ N+L VKI DFGL + I + V
Sbjct: 134 QICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 193
Query: 467 -WYRAPEVLLHSTAYSA 482
WY APE L+ S Y A
Sbjct: 194 FWY-APECLMQSKFYIA 209
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD----------KFLPES--IIRNM 409
H N++ L ++ LY + EY K NL + +R R +PE +++
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 410 M---YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TD 461
+ YQ+ +G+ ++ HRD+ N+L ++KIADFGLAR+I + Y
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 220 RLPVKWM-APEALF 232
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 16/137 (11%)
Query: 358 LKKLSHANLVKLKEVIREN--DTLYFVFEYMKENLYQ--LIRDRDKFLPESIIRNMMY-- 411
L+ L H N+VK K + E+ + + + E++ + L ++++K ++ + + Y
Sbjct: 65 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI---NLKQQLKYAV 121
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTR----- 466
Q+ +G+ ++ + HRD+ N+L VKI DFGL + I + V
Sbjct: 122 QICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 181
Query: 467 -WYRAPEVLLHSTAYSA 482
WY APE L+ S Y A
Sbjct: 182 FWY-APECLMQSKFYIA 197
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY + +Y+ ++ KF E + ++ L++
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALSY 128
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S T T Y PE++
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 183
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N++ L+ V+ + + + EYM+ +L +R D + M+ + G
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 143
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------VSTRWYRA 470
+ ++ HRD+ N+L + K++DFG++R + P Y + RW A
Sbjct: 144 MKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW-TA 202
Query: 471 PEVLLHSTAYSA 482
PE + + SA
Sbjct: 203 PEAIAYRKFTSA 214
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD----------KFLPES--IIRNM 409
H N++ L ++ LY + EY K NL + +R R +PE +++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 410 M---YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TD 461
+ YQ+ +G+ ++ HRD+ N+L +++IADFGLAR+I + Y
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 220 RLPVKWM-APEALF 232
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 149
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S D T Y PE++
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMI 204
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Query: 356 KSLKKLSHANLVKL----KEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMY 411
+ LK L H N+V+ + ++ + V E + R K ++R+
Sbjct: 77 EXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCR 136
Query: 412 QVLQGLAFMHRHG--FFHRDMKPENLLCMG-TELVKIADFGLAREIRSRPYTDYVSTRWY 468
Q+L+GL F+H HRD+K +N+ G T VKI D GLA R+ + T +
Sbjct: 137 QILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEF 196
Query: 469 RAPE 472
APE
Sbjct: 197 XAPE 200
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK+ SH N+V+L V + +Y V E ++ + +R L + M+ G
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAG 225
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD-----YVSTRWYRAP 471
+ ++ HRD+ N L ++KI+DFG++RE Y V +W AP
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKW-TAP 284
Query: 472 EVL 474
E L
Sbjct: 285 EAL 287
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Query: 338 ILSRHVSSRDEMVVC-FYRKSLKKLS--HANLVKLKEVIRENDTLYFVFEYMKENLYQLI 394
+L + V +D+ V C K + L+ H L +L + D L+FV E++
Sbjct: 55 VLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFH 114
Query: 395 RDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI 454
+ + E+ R +++ L F+H G +RD+K +N+L K+ADFG+ +E
Sbjct: 115 IQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174
Query: 455 RSRPYT--DYVSTRWYRAPEVL 474
T + T Y APE+L
Sbjct: 175 ICNGVTTATFCGTPDYIAPEIL 196
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 358 LKKLSHANLVKLKEVIRENDTLY--FVFEYMK-ENLYQLIRDRDK--FLPESIIRNMMYQ 412
LKKL+H N+VKL + E T + + E+ +LY ++ + LPES ++
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRD 120
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCM----GTELVKIADFGLAREIR-SRPYTDYVSTRW 467
V+ G+ + +G HR++KP N++ + G + K+ DFG ARE+ + T
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEE 180
Query: 468 YRAPEVLL-------HSTAYSAPIHL 486
Y P++ H Y A + L
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDL 206
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 123
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S T+ T Y PE++
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMI 178
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMM---Y 411
+ L +++H N+VKL + + V EY + +LY ++ + LP + M
Sbjct: 54 RQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEP-LPYYTAAHAMSWCL 110
Query: 412 QVLQGLAFMHR---HGFFHRDMKPENLLCM-GTELVKIADFGLAREIRSRPYTDYVSTRW 467
Q QG+A++H HRD+KP NLL + G ++KI DFG A +I++ + S W
Sbjct: 111 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAW 170
Query: 468 YRAPEVL 474
APEV
Sbjct: 171 M-APEVF 176
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD----------KFLPES--IIRNM 409
H N++ L ++ LY + EY K NL + +R R +PE +++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 410 M---YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS-----RPYTD 461
+ YQ+ +G+ ++ HRD+ N+L ++KIADFGLAR+I + +
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 220 RLPVKWM-APEALF 232
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 390 LYQLIRDR-DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG---TELVKI 445
L+ I+DR D+ E +M + + + ++H HRD+KPENLL ++K+
Sbjct: 100 LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 159
Query: 446 ADFGLAREIRS-RPYTDYVSTRWYRAPEVL 474
DFG A+E S T+ T +Y APEVL
Sbjct: 160 TDFGFAKETTSHNSLTEPCYTPYYVAPEVL 189
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 27/144 (18%)
Query: 377 DTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMY--QVLQGLAFMHRHGFFHRDMKPE 433
+ L+FV EY+ +L I+ KF + R Y +++ GL F+H G +RD+K +
Sbjct: 91 ENLFFVMEYLNGGDLMYHIQSCHKF---DLSRATFYAAEIILGLQFLHSKGIVYRDLKLD 147
Query: 434 NLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEVLL-----HSTAY------ 480
N+L +KIADFG+ +E + + T Y APE+LL HS +
Sbjct: 148 NILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVL 207
Query: 481 -------SAPIHLSRSQQFLFYSI 497
+P H + ++ LF+SI
Sbjct: 208 LYEMLIGQSPFH-GQDEEELFHSI 230
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 362 SHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMH 421
+H LV L + L+FV EY+ R + LPE R ++ L ++H
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 422 RHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTD-YVSTRWYRAPEVL 474
G +RD+K +N+L +K+ D+G+ +E +R T + T Y APE+L
Sbjct: 171 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEIL 225
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
L+++ H N++ L +V + + E + L+ + ++ L E + + Q+L G
Sbjct: 69 LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDG 127
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIRSR-PYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +K+ DFGLA EI + + T + AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 472 EVL 474
E++
Sbjct: 188 EIV 190
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 358 LKKLSHANLVKLKEVIREND--TLYFVFEYMKENLYQLIRDRDKFLPE---SIIRNMMY- 411
L+ L H +++K K + +L V EY+ +RD +LP + + +++
Sbjct: 87 LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGS---LRD---YLPRHSIGLAQLLLFA 140
Query: 412 -QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS-----RPYTDYVST 465
Q+ +G+A++H + HRD+ N+L LVKI DFGLA+ + R D S
Sbjct: 141 QQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSP 200
Query: 466 RWYRAPEVLLHSTAYSA 482
++ APE L Y A
Sbjct: 201 VFWYAPECLKEYKFYYA 217
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMM---Y 411
+ L +++H N+VKL + + V EY + +LY ++ + LP + M
Sbjct: 53 RQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEP-LPYYTAAHAMSWCL 109
Query: 412 QVLQGLAFMHR---HGFFHRDMKPENLLCM-GTELVKIADFGLAREIRSRPYTDYVSTRW 467
Q QG+A++H HRD+KP NLL + G ++KI DFG A +I++ + S W
Sbjct: 110 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAW 169
Query: 468 YRAPEVL 474
APEV
Sbjct: 170 M-APEVF 175
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDR---------------DKFLPESII 406
H N++ L ++ LY + EY K NL + ++ R ++ L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-----SRPYTD 461
+ YQV +G+ ++ HRD+ N+L ++KIADFGLAR+I +
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 213 RLPVKWM-APEALF 225
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 33/146 (22%)
Query: 362 SHANLVKLKEVIRENDTLYFVFEYM--KENLYQLIRDRDKFLPESI-------------- 405
SH N+V L + +Y +FEY + L L R+KF + I
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 406 -------IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRP 458
+ YQV +G+ F+ HRD+ N+L ++VKI DFGLAR+I S
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD- 225
Query: 459 YTDYVS-------TRWYRAPEVLLHS 477
++YV +W APE L
Sbjct: 226 -SNYVVRGNARLPVKW-MAPESLFEG 249
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD----------KFLPES--IIRNM 409
H N++ L ++ LY + EY K NL + +R R +PE +++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 410 M---YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS-----RPYTD 461
+ YQ+ +G+ ++ HRD+ N+L ++KIADFGLAR+I + +
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 220 RLPVKWM-APEALF 232
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Query: 363 HANLVKLKEVIRENDTLYFVFE--YMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFM 420
H +++L + + V E ++L+ I ++ L E R QV+ +
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP-LGEGPSRCFFGQVVAAIQHC 155
Query: 421 HRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTA 479
H G HRD+K EN+L + K+ DFG + PYTD+ TR Y PE +
Sbjct: 156 HSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQY 215
Query: 480 YSAP 483
++ P
Sbjct: 216 HALP 219
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 358 LKKLSHANLVKLKEV-IRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + +R + V YMK +L IR+ + QV +
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 203
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
G+ F+ F HRD+ N + VK+ADFGLAR++ + +
Sbjct: 204 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 396 DRDKFLPESIIRNMM----YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA 451
D D F E I + +QV +G+ F+ HRD+ N+L +VKI DFGLA
Sbjct: 187 DSDGFYKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLA 246
Query: 452 REIRSRPYTDYVSTRWYRAP 471
R+I P DYV R P
Sbjct: 247 RDIYKNP--DYVRKGDTRLP 264
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
L+++ H N++ L +V + + E + L+ + ++ L E + + Q+L G
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDG 127
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIRSR-PYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +K+ DFGLA EI + + T + AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 472 EVL 474
E++
Sbjct: 188 EIV 190
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 9/125 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD--KFLPESIIRNMMYQVL 414
+K+L H N+V + + L V EY+ + +LY+L+ + L E +M Y V
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVA 147
Query: 415 QGLAFMHRHG--FFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY---TDYVSTRWYR 469
+G+ ++H HRD+K NLL VK+ DFGL+R +++ + T +
Sbjct: 148 KGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWM 206
Query: 470 APEVL 474
APEVL
Sbjct: 207 APEVL 211
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 59/130 (45%), Gaps = 15/130 (11%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQVL 414
K + K H NLV+L + D L V+ YM +L + D P S +M ++
Sbjct: 76 KVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW--HMRCKIA 133
Query: 415 QGLA----FMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------VS 464
QG A F+H + HRD+K N+L KI+DFGLAR S + V
Sbjct: 134 QGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARA--SEKFAQXVMXXRIVG 191
Query: 465 TRWYRAPEVL 474
T Y APE L
Sbjct: 192 TTAYMAPEAL 201
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 362 SHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMH 421
+H LV L + L+FV EY+ R + LPE R ++ L ++H
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 422 RHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTD-YVSTRWYRAPEVL 474
G +RD+K +N+L +K+ D+G+ +E +R T + T Y APE+L
Sbjct: 128 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 182
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 358 LKKLSHANLVKLKEVIRENDTLY--FVFEYMK-ENLYQLIRDRDK--FLPESIIRNMMYQ 412
LKKL+H N+VKL + E T + + E+ +LY ++ + LPES ++
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRD 120
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCM----GTELVKIADFGLAREIRS 456
V+ G+ + +G HR++KP N++ + G + K+ DFG ARE+
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 362 SHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMH 421
+H LV L + L+FV EY+ R + LPE R ++ L ++H
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 422 RHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTD-YVSTRWYRAPEVL 474
G +RD+K +N+L +K+ D+G+ +E +R T + T Y APE+L
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 178
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
L+++ H N++ L +V + + E + L+ + ++ L E + + Q+L G
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDG 127
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIRSR-PYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +K+ DFGLA EI + + T + AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 472 EVL 474
E++
Sbjct: 188 EIV 190
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
L+++ H N++ L +V + + E + L+ + ++ L E + + Q+L G
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDG 127
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIRSR-PYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +K+ DFGLA EI + + T + AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 472 EVL 474
E++
Sbjct: 188 EIV 190
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 126
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S D T Y PE++
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMI 181
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TDYVSTR 466
QV G+A++ F HRD+ N L +VKIADFGL+R I S Y D + R
Sbjct: 182 QVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIR 241
Query: 467 WYRAPEVLLHS 477
W PE + ++
Sbjct: 242 WM-PPESIFYN 251
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%)
Query: 357 SLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
++++ H ++VKL VI EN + L ++ R L + + YQ+
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
LA++ F HRD+ N+L T+ VK+ DFGL+R + Y
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTY 166
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 362 SHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMH 421
+H LV L + L+FV EY+ R + LPE R ++ L ++H
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 422 RHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTD-YVSTRWYRAPEVL 474
G +RD+K +N+L +K+ D+G+ +E +R T + T Y APE+L
Sbjct: 139 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 193
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 366 LVKLKEVIRENDTLYFVFEYMKEN-LYQL-IRDRDKFLPESIIRNMMYQVLQGLAFMHRH 423
++ L EV + + EY ++ L + + + + E+ + ++ Q+L+G+ ++H++
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN 150
Query: 424 GFFHRDMKPENLLC-----MGTELVKIADFGLAREI-RSRPYTDYVSTRWYRAPEVL 474
H D+KP+N+L +G +KI DFG++R+I + + + T Y APE+L
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGD--IKIVDFGMSRKIGHACELREIMGTPEYLAPEIL 205
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
L+++ H N++ L +V + + E + L+ + ++ L E + + Q+L G
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDG 127
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL----VKIADFGLAREIRSR-PYTDYVSTRWYRAP 471
+ ++H H D+KPEN++ + + +K+ DFGLA EI + + T + AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 472 EVL 474
E++
Sbjct: 188 EIV 190
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 376 NDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPEN 434
D L+ V EY+ L ++ + + E I + + LQ L F+H + HR++K +N
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDN 147
Query: 435 LLCMGTELVKIADFGLAREI--RSRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQF 492
+L VK+ DFG +I + V T ++ APEV+ AY + +
Sbjct: 148 ILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIM 206
Query: 493 LFYSIDHVPP 502
I+ PP
Sbjct: 207 AIEMIEGEPP 216
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK+ SH N+V+L V + +Y V E ++ + +R L + M+ G
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAG 225
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE 453
+ ++ HRD+ N L ++KI+DFG++RE
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSRE 262
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 149
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S T T Y PE++
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 204
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 358 LKKLSHANLVKLKEV-IRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + +R + V YMK +L IR+ + QV +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
G+ F+ F HRD+ N + VK+ADFGLAR++ + +
Sbjct: 145 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 358 LKKLSHANLVKLKEV-IRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + +R + V YMK +L IR+ + QV +
Sbjct: 104 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 163
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
G+ ++ F HRD+ N + VK+ADFGLAR++ + Y
Sbjct: 164 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 207
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
++ H N+V++ D L+ V E+++ I + + E I + VLQ L
Sbjct: 75 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQAL 133
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFG----LAREIRSRPYTDYVSTRWYRAPEV 473
+ +H G HRD+K +++L VK++DFG +++E+ R V T ++ APE
Sbjct: 134 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPE- 190
Query: 474 LLHSTAYSAPIHLSRSQQFLFYSIDHVPP 502
L+ Y + + + +D PP
Sbjct: 191 LISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 10/124 (8%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLP----ESIIRNMMYQV 413
K L H N+V+ EN + E + +L L+R K+ P E I Q+
Sbjct: 74 KHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRS--KWGPLKDNEQTIGFYTKQI 131
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMG-TELVKIADFGLAREIRS-RPYTD-YVSTRWYRA 470
L+GL ++H + HRD+K +N+L + ++KI+DFG ++ + P T+ + T Y A
Sbjct: 132 LEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMA 191
Query: 471 PEVL 474
PE++
Sbjct: 192 PEII 195
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
++ H N+V++ D L+ V E+++ I + + E I + VLQ L
Sbjct: 82 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQAL 140
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFG----LAREIRSRPYTDYVSTRWYRAPEV 473
+ +H G HRD+K +++L VK++DFG +++E+ R V T ++ APE
Sbjct: 141 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPE- 197
Query: 474 LLHSTAYSAPIHLSRSQQFLFYSIDHVPP 502
L+ Y + + + +D PP
Sbjct: 198 LISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 358 LKKLSHANLVKLKEV-IRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + +R + V YMK +L IR+ + QV +
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 142
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
G+ F+ F HRD+ N + VK+ADFGLAR++ + +
Sbjct: 143 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 186
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 363 HANLVKL-KEVIRENDTLYFVFEYMK-ENLYQLIRD-RDKFLP-----ESIIRNMM---- 410
H N+V L + L + E+ K NL +R R++F+P E + ++ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 411 -----YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST 465
+QV +G+ F+ HRD+ N+L +VKI DFGLAR+I P DYV
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP--DYVRK 207
Query: 466 RWYRAP 471
R P
Sbjct: 208 GDARLP 213
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 358 LKKLSHANLVKLKEV-IRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + +R + V YMK +L IR+ + QV +
Sbjct: 90 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 149
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
G+ F+ F HRD+ N + VK+ADFGLAR++ + +
Sbjct: 150 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 193
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 363 HANLVKL-KEVIRENDTLYFVFEYMK-ENLYQLIRD-RDKFLP-----ESIIRNMM---- 410
H N+V L + L + E+ K NL +R R++F+P E + ++ +
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 411 -----YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST 465
+QV +G+ F+ HRD+ N+L +VKI DFGLAR+I P DYV
Sbjct: 187 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP--DYVRK 244
Query: 466 RWYRAP 471
R P
Sbjct: 245 GDARLP 250
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 358 LKKLSHANLVKLKEV-IRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + +R + V YMK +L IR+ + QV +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
G+ F+ F HRD+ N + VK+ADFGLAR++ + +
Sbjct: 145 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 358 LKKLSHANLVKLKEV-IRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + +R + V YMK +L IR+ + QV +
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 145
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
G+ F+ F HRD+ N + VK+ADFGLAR++ + +
Sbjct: 146 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 189
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 363 HANLVKL-KEVIRENDTLYFVFEYMK-ENLYQLIRD-RDKFLP-----ESIIRNMM---- 410
H N+V L + L + E+ K NL +R R++F+P E + ++ +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 411 -----YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST 465
+QV +G+ F+ HRD+ N+L +VKI DFGLAR+I P DYV
Sbjct: 152 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP--DYVRK 209
Query: 466 RWYRAP 471
R P
Sbjct: 210 GDARLP 215
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 123
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S T T Y PE++
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 178
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 390 LYQLIRDR-DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG---TELVKI 445
L+ I+DR D+ E +M + + + ++H HRD+KPENLL ++K+
Sbjct: 146 LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 205
Query: 446 ADFGLAREIRS-RPYTDYVSTRWYRAPEVL 474
DFG A+E S T T +Y APEVL
Sbjct: 206 TDFGFAKETTSHNSLTTPCYTPYYVAPEVL 235
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD----------KFLPES--IIRNM 409
H N++ L ++ LY + Y K NL + +R R +PE +++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 410 M---YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TD 461
+ YQ+ +G+ ++ HRD+ N+L ++KIADFGLAR+I + Y
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 220 RLPVKWM-APEALF 232
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 358 LKKLSHANLVKLKEV-IRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + +R + V YMK +L IR+ + QV +
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 145
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
G+ F+ F HRD+ N + VK+ADFGLAR++ + +
Sbjct: 146 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEF 189
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 390 LYQLIRDR-DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG---TELVKI 445
L+ I+DR D+ E +M + + + ++H HRD+KPENLL ++K+
Sbjct: 152 LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 211
Query: 446 ADFGLAREIRS-RPYTDYVSTRWYRAPEVL 474
DFG A+E S T T +Y APEVL
Sbjct: 212 TDFGFAKETTSHNSLTTPCYTPYYVAPEVL 241
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
++ H N+V++ D L+ V E+++ I + + E I + VLQ L
Sbjct: 80 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQAL 138
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFG----LAREIRSRPYTDYVSTRWYRAPEV 473
+ +H G HRD+K +++L VK++DFG +++E+ R V T ++ APE
Sbjct: 139 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPE- 195
Query: 474 LLHSTAYSAPIHLSRSQQFLFYSIDHVPP 502
L+ Y + + + +D PP
Sbjct: 196 LISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 358 LKKLSHANLVKLKEV-IRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + +R + V YMK +L IR+ + QV +
Sbjct: 103 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 162
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
G+ ++ F HRD+ N + VK+ADFGLAR++ + Y
Sbjct: 163 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 206
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 390 LYQLIRDR-DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG---TELVKI 445
L+ I+DR D+ E +M + + + ++H HRD+KPENLL ++K+
Sbjct: 101 LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 160
Query: 446 ADFGLAREIRS-RPYTDYVSTRWYRAPEVL 474
DFG A+E S T T +Y APEVL
Sbjct: 161 TDFGFAKETTSHNSLTTPCYTPYYVAPEVL 190
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 390 LYQLIRDR-DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG---TELVKI 445
L+ I+DR D+ E +M + + + ++H HRD+KPENLL ++K+
Sbjct: 100 LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 159
Query: 446 ADFGLAREIRS-RPYTDYVSTRWYRAPEVL 474
DFG A+E S T T +Y APEVL
Sbjct: 160 TDFGFAKETTSHNSLTTPCYTPYYVAPEVL 189
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 358 LKKLSHANLVKLKEV-IRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + +R + V YMK +L IR+ + QV +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
G+ ++ F HRD+ N + VK+ADFGLAR++ + Y
Sbjct: 145 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 188
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 358 LKKLSHANLVKLKEV-IRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + +R + V YMK +L IR+ + QV +
Sbjct: 77 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 136
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
G+ ++ F HRD+ N + VK+ADFGLAR++ + Y
Sbjct: 137 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 180
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 390 LYQLIRDR-DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG---TELVKI 445
L+ I+DR D+ E +M + + + ++H HRD+KPENLL ++K+
Sbjct: 102 LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 161
Query: 446 ADFGLAREIRS-RPYTDYVSTRWYRAPEVL 474
DFG A+E S T T +Y APEVL
Sbjct: 162 TDFGFAKETTSHNSLTTPCYTPYYVAPEVL 191
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 358 LKKLSHANLVKLKEV-IRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + +R + V YMK +L IR+ + QV +
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 143
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
G+ ++ F HRD+ N + VK+ADFGLAR++ + Y
Sbjct: 144 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 187
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 22/134 (16%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD----------KFLPES--IIRNM 409
H N++ L ++ LY + Y K NL + +R R +PE +++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 410 M---YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TD 461
+ YQ+ +G+ ++ HRD+ N+L ++KIADFGLAR+I + Y
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 462 YVSTRWYRAPEVLL 475
+ +W APE L
Sbjct: 220 RLPVKWM-APEALF 232
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 390 LYQLIRDR-DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG---TELVKI 445
L+ I+DR D+ E +M + + + ++H HRD+KPENLL ++K+
Sbjct: 108 LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 167
Query: 446 ADFGLAREIRS-RPYTDYVSTRWYRAPEVL 474
DFG A+E S T T +Y APEVL
Sbjct: 168 TDFGFAKETTSHNSLTTPCYTPYYVAPEVL 197
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 358 LKKLSHANLVKLKEV-IRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + +R + V YMK +L IR+ + QV +
Sbjct: 80 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 139
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
G+ ++ F HRD+ N + VK+ADFGLAR++ + Y
Sbjct: 140 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 15/122 (12%)
Query: 363 HANLVKL-KEVIRENDTLYFVFEYMK-ENLYQLIRD-RDKFLP-ESIIRNMM-------- 410
H N+V L + L + E+ K NL +R R++F+P + + ++ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 411 -YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYR 469
+QV +G+ F+ HRD+ N+L +VKI DFGLAR+I P DYV R
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDP--DYVRKGDAR 207
Query: 470 AP 471
P
Sbjct: 208 LP 209
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 390 LYQLIRDR-DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG---TELVKI 445
L+ I+DR D+ E +M + + + ++H HRD+KPENLL ++K+
Sbjct: 106 LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 165
Query: 446 ADFGLAREIRS-RPYTDYVSTRWYRAPEVL 474
DFG A+E S T T +Y APEVL
Sbjct: 166 TDFGFAKETTSHNSLTTPCYTPYYVAPEVL 195
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 358 LKKLSHANLVKLKEV-IRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + +R + V YMK +L IR+ + QV +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
G+ ++ F HRD+ N + VK+ADFGLAR++ + Y
Sbjct: 145 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 188
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 390 LYQLIRDR-DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG---TELVKI 445
L+ I+DR D+ E +M + + + ++H HRD+KPENLL ++K+
Sbjct: 107 LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 166
Query: 446 ADFGLAREIRS-RPYTDYVSTRWYRAPEVL 474
DFG A+E S T T +Y APEVL
Sbjct: 167 TDFGFAKETTSHNSLTTPCYTPYYVAPEVL 196
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 390 LYQLIRDR-DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG---TELVKI 445
L+ I+DR D+ E +M + + + ++H HRD+KPENLL ++K+
Sbjct: 102 LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 161
Query: 446 ADFGLAREIRS-RPYTDYVSTRWYRAPEVL 474
DFG A+E S T T +Y APEVL
Sbjct: 162 TDFGFAKETTSHNSLTTPCYTPYYVAPEVL 191
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 390 LYQLIRDR-DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG---TELVKI 445
L+ I+DR D+ E +M + + + ++H HRD+KPENLL ++K+
Sbjct: 116 LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 175
Query: 446 ADFGLAREIRS-RPYTDYVSTRWYRAPEVL 474
DFG A+E S T T +Y APEVL
Sbjct: 176 TDFGFAKETTSHNSLTTPCYTPYYVAPEVL 205
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 358 LKKLSHANLVKLKEV-IRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + +R + V YMK +L IR+ + QV +
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 142
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
G+ ++ F HRD+ N + VK+ADFGLAR++ + Y
Sbjct: 143 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 186
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 358 LKKLSHANLVKLKEVIREND--TLYFVFEYMKENLYQLIRDRDKFLPE---SIIRNMMY- 411
L+ L H +++K K + +L V EY+ +RD +LP + + +++
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS---LRD---YLPRHSIGLAQLLLFA 123
Query: 412 -QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS-----RPYTDYVST 465
Q+ +G+A++H + HR++ N+L LVKI DFGLA+ + R D S
Sbjct: 124 QQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 466 RWYRAPEVLLHSTAYSA 482
++ APE L Y A
Sbjct: 184 VFWYAPECLKEYKFYYA 200
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 358 LKKLSHANLVKLKEV-IRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + +R + V YMK +L IR+ + QV +
Sbjct: 82 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 141
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
G+ ++ F HRD+ N + VK+ADFGLAR++ + Y
Sbjct: 142 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 185
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L++ + + + +P S + +++QV G+ ++ F HRD+ N+L + KI+DFG
Sbjct: 96 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFG 155
Query: 450 LAREIRSRP--YTDYVSTRW---YRAPEVL 474
L++ + + YT + +W + APE +
Sbjct: 156 LSKALGADDSYYTARSAGKWPLKWYAPECI 185
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 358 LKKLSHANLVKLKEVIREND--TLYFVFEYMKENLYQLIRDRDKFLPE---SIIRNMMY- 411
L+ L H +++K K + +L V EY+ +RD +LP + + +++
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS---LRD---YLPRHSIGLAQLLLFA 123
Query: 412 -QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS-----RPYTDYVST 465
Q+ +G+A++H + HR++ N+L LVKI DFGLA+ + R D S
Sbjct: 124 QQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 466 RWYRAPEVLLHSTAYSA 482
++ APE L Y A
Sbjct: 184 VFWYAPECLKEYKFYYA 200
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 126
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S T T Y PE++
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 181
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 128
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S T T Y PE++
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 183
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 372 VIRENDTLYFVFEYMKENL---YQLIRDRDKFLPESIIRNMMYQVLQGLAFMH-RHGFFH 427
+ RE D ++ E M +L Y+ + D+ + +PE I+ + +++ L +H + H
Sbjct: 119 LFREGD-VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIH 177
Query: 428 RDMKPENLLCMGTELVKIADFGLARE-IRSRPYTDYVSTRWYRAPEVL---LHSTAYS 481
RD+KP N+L VK+ DFG++ + S T + Y APE + L+ YS
Sbjct: 178 RDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYS 235
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 357 SLKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
++++ H ++VKL VI EN ++ + E L ++ R L + + YQ+
Sbjct: 444 TMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 502
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
LA++ F HRD+ N+L T+ VK+ DFGL+R + Y
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTY 546
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 82 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 140
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S T T Y PE++
Sbjct: 141 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 195
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 127
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S T T Y PE++
Sbjct: 128 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 182
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 64 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 122
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S T T Y PE++
Sbjct: 123 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 177
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY + +Y+ ++ KF E + ++ L++
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALSY 128
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLA 451
H HRD+KPENLL +KIADFG +
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 123
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S T T Y PE++
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMI 178
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 10/125 (8%)
Query: 355 RKSLKKLSHANLVKLKEVIREND-----TLYFVFEYMKENLYQLIRDRDKFLPESIIRNM 409
R+ L ++ H ++V++ + D Y V EY+ L R + + LP +
Sbjct: 130 RQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQ--SLKRSKGQKLPVAEAIAY 187
Query: 410 MYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYR 469
+ ++L L+++H G + D+KPEN++ + E +K+ D G I S Y T ++
Sbjct: 188 LLEILPALSYLHSIGLVYNDLKPENIM-LTEEQLKLIDLGAVSRINSFGY--LYGTPGFQ 244
Query: 470 APEVL 474
APE++
Sbjct: 245 APEIV 249
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 128
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S T T Y PE +
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXI 183
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 363 HANLVKL-KEVIRENDTLYFVFEYMK-ENLYQLIRD-RDKFLP-----ESIIRNMM---- 410
H N+V L + L + E+ K NL +R R++F+P E + ++ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 411 -----YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST 465
+QV +G+ F+ HRD+ N+L +VKI DFGLAR+I P DYV
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP--DYVRK 198
Query: 466 RWYRAP 471
R P
Sbjct: 199 GDARLP 204
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 15/122 (12%)
Query: 363 HANLVKL-KEVIRENDTLYFVFEYMK-ENLYQLIRD-RDKFLP-ESIIRNMM-------- 410
H N+V L + L + E+ K NL +R R++F+P + + ++ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 411 -YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYR 469
+QV +G+ F+ HRD+ N+L +VKI DFGLAR+I P DYV R
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDP--DYVRKGDAR 207
Query: 470 AP 471
P
Sbjct: 208 LP 209
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLP--ESIIRNMMYQVLQ 415
K L H N+V+ EN + E + +L L+R + L E I Q+L+
Sbjct: 60 KHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILE 119
Query: 416 GLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRS-RPYTD-YVSTRWYRAPE 472
GL ++H + HRD+K +N+L + ++KI+DFG ++ + P T+ + T Y APE
Sbjct: 120 GLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPE 179
Query: 473 VL 474
++
Sbjct: 180 II 181
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 9/125 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD--KFLPESIIRNMMYQVL 414
+K+L H N+V + + L V EY+ + +LY+L+ + L E +M Y V
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVA 147
Query: 415 QGLAFMHRHG--FFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY---TDYVSTRWYR 469
+G+ ++H HR++K NLL VK+ DFGL+R +++ + T +
Sbjct: 148 KGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR-LKASTFLSSKSAAGTPEWM 206
Query: 470 APEVL 474
APEVL
Sbjct: 207 APEVL 211
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 363 HANLVKL-KEVIRENDTLYFVFEYMK-ENLYQLIRD-RDKFLP-----ESIIRNMM---- 410
H N+V L + L + E+ K NL +R R++F+P E + ++ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 411 -----YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST 465
+QV +G+ F+ HRD+ N+L +VKI DFGLAR+I P DYV
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP--DYVRK 198
Query: 466 RWYRAP 471
R P
Sbjct: 199 GDARLP 204
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 352 CFYRKSLKKLSHAN---LVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIR 407
F+ + ++ AN +V+L +++ LY V EYM +L L+ + D +PE +
Sbjct: 120 AFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD--VPEKWAK 177
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT---DYVS 464
+V+ L +H G HRD+KP+N+L +K+ADFG ++ V
Sbjct: 178 FYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVG 237
Query: 465 TRWYRAPEVL 474
T Y +PEVL
Sbjct: 238 TPDYISPEVL 247
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 120
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S T T Y PE++
Sbjct: 121 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 175
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENL-YQLIRDRDKFLPESIIRNMMY--QVL 414
+K L H ++VKL +I E T + Y L + L R+++ ++ ++Y Q+
Sbjct: 67 MKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSL---KVLTLVLYSLQIC 123
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTR 466
+ +A++ HRD+ N+L E VK+ DFGL+R I Y TR
Sbjct: 124 KAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTR 175
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 126
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S T T Y PE++
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 181
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENL-YQLIRDRDKFLPESIIRNMMY--QVL 414
+K L H ++VKL +I E T + Y L + L R+++ ++ ++Y Q+
Sbjct: 79 MKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSL---KVLTLVLYSLQIC 135
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTR 466
+ +A++ HRD+ N+L E VK+ DFGL+R I Y TR
Sbjct: 136 KAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTR 187
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRA 470
YQV +G+AF+ HRD+ N+L + KI DFGLAR+I++ ++YV R
Sbjct: 168 YQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND--SNYVVKGNARL 225
Query: 471 P 471
P
Sbjct: 226 P 226
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS 456
YQV +G+AF+ HRD+ N+L + KI DFGLAR+I++
Sbjct: 170 YQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 215
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENL-YQLIRDRDKFLPESIIRNMMY--QVL 414
+K L H ++VKL +I E T + Y L + L R+++ ++ ++Y Q+
Sbjct: 63 MKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSL---KVLTLVLYSLQIC 119
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTR 466
+ +A++ HRD+ N+L E VK+ DFGL+R I Y TR
Sbjct: 120 KAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTR 171
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 363 HANLVKL-KEVIRENDTLYFVFEYMK-ENLYQLIRD-RDKFLP---ESIIRNMM------ 410
H N+V L + L + E+ K NL +R R++F+P E + ++ +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 411 ---YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRP 458
+QV +G+ F+ HRD+ N+L +VKI DFGLAR+I P
Sbjct: 152 XYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 29/149 (19%)
Query: 353 FYRKS--LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDR----------DK 399
F R++ L L H ++V+ V E L VFEYM+ +L + +R +
Sbjct: 61 FQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 120
Query: 400 FLPESI----IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR 455
P + + + QV G+ ++ F HRD+ N L +VKI DFG++R+I
Sbjct: 121 VAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 180
Query: 456 SRPYTDY--------VSTRWYRAPEVLLH 476
S TDY + RW PE +L+
Sbjct: 181 S---TDYYRVGGRTMLPIRWM-PPESILY 205
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRA 470
YQV +G+AF+ HRD+ N+L + KI DFGLAR+I++ ++YV R
Sbjct: 152 YQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND--SNYVVKGNARL 209
Query: 471 P 471
P
Sbjct: 210 P 210
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS 456
YQV +G+AF+ HRD+ N+L + KI DFGLAR+I++
Sbjct: 175 YQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 220
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%)
Query: 357 SLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
++++ H ++VKL VI EN + L ++ R L + + YQ+
Sbjct: 92 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 151
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
LA++ F HRD+ N+L + VK+ DFGL+R + Y
Sbjct: 152 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 194
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L ++ +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 65 LRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 123
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S T Y PE++
Sbjct: 124 CHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMI 178
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 29/149 (19%)
Query: 353 FYRKS--LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDR----------DK 399
F R++ L L H ++V+ V E L VFEYM+ +L + +R +
Sbjct: 67 FQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 126
Query: 400 FLPESI----IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR 455
P + + + QV G+ ++ F HRD+ N L +VKI DFG++R+I
Sbjct: 127 VAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 186
Query: 456 SRPYTDY--------VSTRWYRAPEVLLH 476
S TDY + RW PE +L+
Sbjct: 187 S---TDYYRVGGRTMLPIRWM-PPESILY 211
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%)
Query: 357 SLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
++++ H ++VKL VI EN + L ++ R L + + YQ+
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
LA++ F HRD+ N+L + VK+ DFGL+R + Y
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 166
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 124
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S T T Y PE++
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMI 179
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 339 LSRHVSSRDEMVVCFYRK--SLKKLSHANLVKLKEVIRENDTLYFVFEY--MKENLYQLI 394
L V S+ E + F R+ ++ L H NL++L V+ + V E + L +L
Sbjct: 54 LKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLR 112
Query: 395 RDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI 454
+ + FL ++ R + QV +G+ ++ F HRD+ NLL +LVKI DFGL +
Sbjct: 113 KHQGHFLLGTLSRYAV-QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL---M 168
Query: 455 RSRPYTD--YVSTRWYRAP 471
R+ P D YV + P
Sbjct: 169 RALPQNDDHYVMQEHRKVP 187
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 29 GKPAVPNGPSISIK---MKRKYYSWEEAMN--LREVKSLKKLSHANLVKLKEVILDPPL 82
G+ P+G ++S+ +K S EAM+ +REV ++ L H NL++L V+L PP+
Sbjct: 37 GEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM 95
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 16/112 (14%)
Query: 363 HANLVKL-KEVIRENDTLYFVFEYMK-ENLYQLIRD-RDKFLP----ESIIRNMM----- 410
H N+V L + L + E+ K NL +R R++F+P E + ++ +
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 411 ----YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRP 458
+QV +G+ F+ HRD+ N+L +VKI DFGLAR+I P
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 339 LSRHVSSRDEMVVCFYRK--SLKKLSHANLVKLKEVIRENDTLYFVFEY--MKENLYQLI 394
L V S+ E + F R+ ++ L H NL++L V+ + V E + L +L
Sbjct: 54 LKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLR 112
Query: 395 RDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI 454
+ + FL ++ R + QV +G+ ++ F HRD+ NLL +LVKI DFGL R +
Sbjct: 113 KHQGHFLLGTLSRYAV-QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 29 GKPAVPNGPSISIK---MKRKYYSWEEAMN--LREVKSLKKLSHANLVKLKEVILDPPL 82
G+ P+G ++S+ +K S EAM+ +REV ++ L H NL++L V+L PP+
Sbjct: 37 GEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM 95
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 339 LSRHVSSRDEMVVCFYRK--SLKKLSHANLVKLKEVIRENDTLYFVFEY--MKENLYQLI 394
L V S+ E + F R+ ++ L H NL++L V+ + V E + L +L
Sbjct: 48 LKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLR 106
Query: 395 RDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI 454
+ + FL ++ R + QV +G+ ++ F HRD+ NLL +LVKI DFGL +
Sbjct: 107 KHQGHFLLGTLSRYAV-QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL---M 162
Query: 455 RSRPYTD--YVSTRWYRAP 471
R+ P D YV + P
Sbjct: 163 RALPQNDDHYVMQEHRKVP 181
Score = 38.5 bits (88), Expect = 0.016, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 29 GKPAVPNGPSISIK---MKRKYYSWEEAMN--LREVKSLKKLSHANLVKLKEVILDPPL 82
G+ P+G ++S+ +K S EAM+ +REV ++ L H NL++L V+L PP+
Sbjct: 31 GEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM 89
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 18/137 (13%)
Query: 358 LKKLSHANLVKLKEVIREND--TLYFVFEYMKENLYQLIRDRDKFLPESII---RNMMY- 411
L+ L H ++VK K + ++ V EY+ +RD +LP + + +++
Sbjct: 65 LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS---LRD---YLPRHCVGLAQLLLFA 118
Query: 412 -QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS-----RPYTDYVST 465
Q+ +G+A++H + HR + N+L LVKI DFGLA+ + R D S
Sbjct: 119 QQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 178
Query: 466 RWYRAPEVLLHSTAYSA 482
++ APE L Y A
Sbjct: 179 VFWYAPECLKECKFYYA 195
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%)
Query: 357 SLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
++++ H ++VKL VI EN + L ++ R L + + YQ+
Sbjct: 69 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 128
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
LA++ F HRD+ N+L + VK+ DFGL+R + Y
Sbjct: 129 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%)
Query: 357 SLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
++++ H ++VKL VI EN + L ++ R L + + YQ+
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
LA++ F HRD+ N+L + VK+ DFGL+R + Y
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 166
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 18/137 (13%)
Query: 358 LKKLSHANLVKLKEVIREND--TLYFVFEYMKENLYQLIRDRDKFLPESII---RNMMY- 411
L+ L H ++VK K + ++ V EY+ +RD +LP + + +++
Sbjct: 64 LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS---LRD---YLPRHCVGLAQLLLFA 117
Query: 412 -QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS-----RPYTDYVST 465
Q+ +G+A++H + HR + N+L LVKI DFGLA+ + R D S
Sbjct: 118 QQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 177
Query: 466 RWYRAPEVLLHSTAYSA 482
++ APE L Y A
Sbjct: 178 VFWYAPECLKECKFYYA 194
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 407 RNMMY--QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSR--PYTDY 462
R + Y Q++ GL +H+ +RD+KPEN+L V+I+D GLA E+++ Y
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 463 VSTRWYRAPEVLL 475
T + APE+LL
Sbjct: 350 AGTPGFMAPELLL 362
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 339 LSRHVSSRDEMVVCFYRK--SLKKLSHANLVKLKEVIRENDTLYFVFEY--MKENLYQLI 394
L V S+ E + F R+ ++ L H NL++L V+ + V E + L +L
Sbjct: 44 LKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLR 102
Query: 395 RDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI 454
+ + FL ++ R + QV +G+ ++ F HRD+ NLL +LVKI DFGL +
Sbjct: 103 KHQGHFLLGTLSRYAV-QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL---M 158
Query: 455 RSRPYTD--YVSTRWYRAP 471
R+ P D YV + P
Sbjct: 159 RALPQNDDHYVMQEHRKVP 177
Score = 38.5 bits (88), Expect = 0.016, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 29 GKPAVPNGPSISIK---MKRKYYSWEEAMN--LREVKSLKKLSHANLVKLKEVILDPPL 82
G+ P+G ++S+ +K S EAM+ +REV ++ L H NL++L V+L PP+
Sbjct: 27 GEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM 85
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 407 RNMMY--QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSR--PYTDY 462
R + Y Q++ GL +H+ +RD+KPEN+L V+I+D GLA E+++ Y
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 463 VSTRWYRAPEVLL 475
T + APE+LL
Sbjct: 350 AGTPGFMAPELLL 362
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 407 RNMMY--QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSR--PYTDY 462
R + Y Q++ GL +H+ +RD+KPEN+L V+I+D GLA E+++ Y
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 463 VSTRWYRAPEVLL 475
T + APE+LL
Sbjct: 350 AGTPGFMAPELLL 362
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%)
Query: 357 SLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
++++ H ++VKL VI EN + L ++ R L + + YQ+
Sbjct: 67 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
LA++ F HRD+ N+L + VK+ DFGL+R + Y
Sbjct: 127 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 169
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%)
Query: 357 SLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
++++ H ++VKL VI EN + L ++ R L + + YQ+
Sbjct: 61 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 120
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
LA++ F HRD+ N+L + VK+ DFGL+R + Y
Sbjct: 121 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 163
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 407 RNMMY--QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSR--PYTDY 462
R + Y Q++ GL +H+ +RD+KPEN+L V+I+D GLA E+++ Y
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 463 VSTRWYRAPEVLL 475
T + APE+LL
Sbjct: 350 AGTPGFMAPELLL 362
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%)
Query: 357 SLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
++++ H ++VKL VI EN + L ++ R L + + YQ+
Sbjct: 66 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 125
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
LA++ F HRD+ N+L + VK+ DFGL+R + Y
Sbjct: 126 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 168
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 363 HANLVKL-KEVIRENDTLYFVFEYMK-ENLYQLIRD-RDKFLP-----ESIIRNMM---- 410
H N+V L + L + E+ K NL +R R++F+P E + ++ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 411 -----YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRP 458
+QV +G+ F+ HRD+ N+L +VKI DFGLAR+I P
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 339 LSRHVSSRDEMVVCFYRK--SLKKLSHANLVKLKEVIRENDTLYFVFEY--MKENLYQLI 394
L V S+ E + F R+ ++ L H NL++L V+ + V E + L +L
Sbjct: 44 LKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLR 102
Query: 395 RDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI 454
+ + FL ++ R + QV +G+ ++ F HRD+ NLL +LVKI DFGL R +
Sbjct: 103 KHQGHFLLGTLSRYAV-QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
Score = 38.5 bits (88), Expect = 0.018, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 29 GKPAVPNGPSISIK---MKRKYYSWEEAMN--LREVKSLKKLSHANLVKLKEVILDPPL 82
G+ P+G ++S+ +K S EAM+ +REV ++ L H NL++L V+L PP+
Sbjct: 27 GEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM 85
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 339 LSRHVSSRDEMVVCFYRK--SLKKLSHANLVKLKEVIRENDTLYFVFEY--MKENLYQLI 394
L V S+ E + F R+ ++ L H NL++L V+ + V E + L +L
Sbjct: 44 LKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLR 102
Query: 395 RDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI 454
+ + FL ++ R + QV +G+ ++ F HRD+ NLL +LVKI DFGL R +
Sbjct: 103 KHQGHFLLGTLSRYAV-QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
Score = 38.5 bits (88), Expect = 0.018, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 29 GKPAVPNGPSISIK---MKRKYYSWEEAMN--LREVKSLKKLSHANLVKLKEVILDPPL 82
G+ P+G ++S+ +K S EAM+ +REV ++ L H NL++L V+L PP+
Sbjct: 27 GEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM 85
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ +F E + ++ L++
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF-DEQRTATYITELANALSY 127
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S T T Y PE++
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 182
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 20/127 (15%)
Query: 353 FYRKS--LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRD---KFLP--ES 404
F R++ L L H ++V+ V E L VFEYM+ +L + +R K L E
Sbjct: 90 FQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 149
Query: 405 I---------IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR 455
+ + + QV G+ ++ F HRD+ N L +VKI DFG++R+I
Sbjct: 150 VAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 209
Query: 456 SRPYTDY 462
S TDY
Sbjct: 210 S---TDY 213
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ +L + +V+L V + + L V E L++ + + + +P S + +++QV G
Sbjct: 390 MHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 448
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRP--YTDYVSTRW---YRAP 471
+ ++ F HR++ N+L + KI+DFGL++ + + YT + +W + AP
Sbjct: 449 MKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP 508
Query: 472 EVL 474
E +
Sbjct: 509 ECI 511
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N++ L+ V+ ++ + + E+M+ +L +R D + M+ + G
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 147
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR---SRP-YTDY----VSTRWY 468
+ ++ + HRD+ N+L + K++DFGL+R + S P YT + RW
Sbjct: 148 MKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW- 206
Query: 469 RAPEVLLHSTAYSA 482
APE + + SA
Sbjct: 207 TAPEAIQYRKFTSA 220
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 363 HANLVKL-KEVIRENDTLYFVFEYMK-ENLYQLIRD-RDKFLP-----ESIIRNMM---- 410
H N+V L + L + E+ K NL +R R++F+P E + ++ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 411 -----YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRP 458
+QV +G+ F+ HRD+ N+L +VKI DFGLAR+I P
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 193
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 390 LYQLIRDR-DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG---TELVKI 445
L+ I+DR D+ E + + + + ++H HRD+KPENLL ++K+
Sbjct: 146 LFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 205
Query: 446 ADFGLAREIRS-RPYTDYVSTRWYRAPEVL 474
DFG A+E S T T +Y APEVL
Sbjct: 206 TDFGFAKETTSHNSLTTPCYTPYYVAPEVL 235
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N++++ + +Y + E+ + LY+ ++ +F E M ++ L +
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADALHY 129
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLA 451
H HRD+KPENLL +KIADFG +
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 387 KENLYQLI-RDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKI 445
K L Q I + R + L + + + Q+ +G+ ++H HRD+KP N+ + T+ VKI
Sbjct: 118 KGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKI 177
Query: 446 ADFGLAREIRSR-PYTDYVSTRWYRAPE 472
DFGL +++ T T Y +PE
Sbjct: 178 GDFGLVTSLKNDGKRTRSKGTLRYMSPE 205
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N++++ + +Y + E+ + LY+ ++ +F E M ++ L +
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADALHY 129
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLA 451
H HRD+KPENLL +KIADFG +
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRA 470
+QV +G+ F+ HRD+ N+L +VKI DFGLAR+I P DYV R
Sbjct: 205 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP--DYVRKGDARL 262
Query: 471 P 471
P
Sbjct: 263 P 263
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRA 470
+QV +G+ F+ HRD+ N+L +VKI DFGLAR+I P DYV R
Sbjct: 200 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP--DYVRKGDARL 257
Query: 471 P 471
P
Sbjct: 258 P 258
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 126
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S T Y PE++
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMI 181
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRA 470
+QV +G+ F+ HRD+ N+L +VKI DFGLAR+I P DYV R
Sbjct: 207 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP--DYVRKGDARL 264
Query: 471 P 471
P
Sbjct: 265 P 265
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N++++ + +Y + E+ + LY+ ++ +F E M ++ L +
Sbjct: 72 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADALHY 130
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLA 451
H HRD+KPENLL +KIADFG +
Sbjct: 131 CHERKVIHRDIKPENLLMGYKGELKIADFGWS 162
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRA 470
+QV +G+ F+ HRD+ N+L +VKI DFGLAR+I P DYV R
Sbjct: 198 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP--DYVRKGDARL 255
Query: 471 P 471
P
Sbjct: 256 P 256
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 356 KSLKKLSHANLVKLK----------EVIRENDT------LYFVFEYM-KENLYQLI-RDR 397
K+L KL H N+V E +N + L+ E+ K L Q I + R
Sbjct: 56 KALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 115
Query: 398 DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS 456
+ L + + + Q+ +G+ ++H +RD+KP N+ + T+ VKI DFGL +++
Sbjct: 116 GEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 174
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 343 VSSRDEMVVCFYRK--SLKKLSHANLVKLKEVIRENDTLYFVFEY--MKENLYQLIRDRD 398
V S+ E + F R+ ++ L H NL++L V+ + V E + L +L + +
Sbjct: 52 VLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQG 110
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI 454
FL ++ R + QV +G+ ++ F HRD+ NLL +LVKI DFGL R +
Sbjct: 111 HFLLGTLSRYAV-QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 29 GKPAVPNGPSISIK---MKRKYYSWEEAMN--LREVKSLKKLSHANLVKLKEVILDPPL 82
G+ P+G ++S+ +K S EAM+ +REV ++ L H NL++L V+L PP+
Sbjct: 31 GEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM 89
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS 456
YQV +G+AF+ HRD+ N+L + KI DFGLAR I++
Sbjct: 175 YQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKN 220
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 363 HANLVKL-KEVIRENDTLYFVFEYMK-ENLYQLIRD-RDKFLP-----ESIIRNMM---- 410
H N+V L + L + E+ K NL +R R++F+P E + ++ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 411 -----YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRP 458
+QV +G+ F+ HRD+ N+L +VKI DFGLAR+I P
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 202
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 124
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLA 451
H HRD+KPENLL +KIADFG +
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 358 LKKLSHANLVKLKEV-IRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + +R + V YMK +L IR+ + QV +
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 143
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSR 457
G+ ++ F HRD+ N + VK+ADFGLAR++ +
Sbjct: 144 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 185
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 357 SLKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
++ L HA++V+L + +L V +Y+ +L +R L ++ N Q+ +
Sbjct: 86 AIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAK 144
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA 451
G+ ++ HG HR++ N+L V++ADFG+A
Sbjct: 145 GMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 180
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 125
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLA 451
H HRD+KPENLL +KIADFG +
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 157
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 357 SLKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
++ L HA++V+L + +L V +Y+ +L +R L ++ N Q+ +
Sbjct: 68 AIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAK 126
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA 451
G+ ++ HG HR++ N+L V++ADFG+A
Sbjct: 127 GMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 162
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 125
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIA+FG + S T T Y PE++
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMI 180
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSR--------PYTDY- 462
Q+ + + F+H G HRD+KP N+ ++VK+ DFGL + P Y
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 463 -----VSTRWYRAPEVLLHSTAYSAPIHL 486
V T+ Y +PE +H YS + +
Sbjct: 232 THXGQVGTKLYMSPE-QIHGNNYSHKVDI 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 123
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIADFG + S T Y PE++
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMI 178
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 363 HANLVKL-KEVIRENDTLYFVFEYMK-ENLYQLIRD-RDKFLP-----ESIIRNMM---- 410
H N+V L + L + E+ K NL +R R++F+P E + ++ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 411 -----YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRP 458
+QV +G+ F+ HRD+ N+L +VKI DFGLAR+I P
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 193
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 357 SLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
++++ H ++VKL VI EN + L ++ R L + + YQ+
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
LA++ F HRD+ N+L + VK+ DFGL+R
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 13/148 (8%)
Query: 358 LKKLSHANLVKLKEVIRENDTL-----YFVFEYMKEN------LYQLIRDRDKFLPESII 406
+K SH N+++L V E + + +MK LY + K +P +
Sbjct: 90 MKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL 149
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTR 466
M + G+ ++ F HRD+ N + V +ADFGL+++I S Y Y R
Sbjct: 150 LKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY--YRQGR 207
Query: 467 WYRAPEVLLHSTAYSAPIHLSRSQQFLF 494
+ P + + + ++ S+S + F
Sbjct: 208 IAKMPVKWIAIESLADRVYTSKSDVWAF 235
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI 454
QV QG+AF+ HRD+ N+L + KI DFGLAR+I
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 214
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI 454
QV QG+AF+ HRD+ N+L + KI DFGLAR+I
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 214
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 123
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLA 451
H HRD+KPENLL +KIADFG +
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 357 SLKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
++++ H ++VKL VI EN ++ + E L ++ R L + + YQ+
Sbjct: 444 TMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 502
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY 459
LA++ F HRD+ N+L + VK+ DFGL+R + Y
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 126
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
H HRD+KPENLL +KIA+FG + S T T Y PE++
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMI 181
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI 454
QV QG+AF+ HRD+ N+L + KI DFGLAR+I
Sbjct: 174 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 216
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 46.2 bits (108), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHR 422
H V+L++ E LY E +L Q LPE+ + + L LA +H
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS 175
Query: 423 HGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVS-TRWYRAPEVLLHSTAYS 481
G H D+KP N+ K+ DFGL E+ + + Y APE+L S +
Sbjct: 176 QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTA 235
Query: 482 API 484
A +
Sbjct: 236 ADV 238
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 46.2 bits (108), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ + + + E+M+ L +R D + M+ + G
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 128
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR---EIRSRP-YTDY----VSTRWY 468
+ ++ + HRD+ N+L + K++DFGL+R E S P YT + RW
Sbjct: 129 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRW- 187
Query: 469 RAPEVL 474
APE +
Sbjct: 188 TAPEAI 193
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Query: 376 NDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFM-HRHGFFHRDMKPEN 434
N ++ E M +L + +PE I+ M +++ L ++ +HG HRD+KP N
Sbjct: 96 NTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSN 155
Query: 435 LLCMGTELVKIADFGLA-REIRSRPYTDYVSTRWYRAPE 472
+L +K+ DFG++ R + + Y APE
Sbjct: 156 ILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPE 194
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ KF E + ++ L++
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSY 126
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLA 451
H HRD+KPENLL +KIADFG +
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 22/138 (15%)
Query: 360 KLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLI-----------RDRDKFLPESI-- 405
+L H N+V L V+ ++ L +F Y +L++ + D D+ + ++
Sbjct: 68 RLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP 127
Query: 406 --IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY---- 459
+++ Q+ G+ ++ H H+D+ N+L VKI+D GL RE+ + Y
Sbjct: 128 PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 187
Query: 460 -TDYVSTRWYRAPEVLLH 476
+ RW APE +++
Sbjct: 188 GNSLLPIRWM-APEAIMY 204
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI 454
QV QG+AF+ HRD+ N+L + KI DFGLAR+I
Sbjct: 168 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 210
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 63/151 (41%), Gaps = 31/151 (20%)
Query: 351 VCFYRKSLKKLS-HANLVKLKEVI----RENDTLYFVF----EYMKENLYQLIRDRDKFL 401
VCF +KKLS H N+V+ E+DT F E K L + ++ +
Sbjct: 76 VCF----MKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG 131
Query: 402 PESI--IRNMMYQVLQGLAFMHRHG--FFHRDMKPENLLCMGTELVKIADFGLAREIRSR 457
P S + + YQ + + MHR HRD+K ENLL +K+ DFG A I
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHY 191
Query: 458 PYTDYVSTR--------------WYRAPEVL 474
P + + R YR PE++
Sbjct: 192 PDYSWSAQRRALVEEEITRNTTPMYRTPEII 222
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI 454
QV QG+AF+ HRD+ N+L + KI DFGLAR+I
Sbjct: 160 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 202
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+ L+ H L LK + +D L FV EY R++ E R +++
Sbjct: 60 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS 119
Query: 416 GLAFMH-RHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT--DYVSTRWYRAPE 472
L ++H +RD+K ENL+ +KI DFGL +E T + T Y APE
Sbjct: 120 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 179
Query: 473 VL 474
VL
Sbjct: 180 VL 181
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+ L+ H L LK + +D L FV EY R++ E R +++
Sbjct: 62 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS 121
Query: 416 GLAFMH-RHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT--DYVSTRWYRAPE 472
L ++H +RD+K ENL+ +KI DFGL +E T + T Y APE
Sbjct: 122 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 181
Query: 473 VL 474
VL
Sbjct: 182 VL 183
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+ L+ H L LK + +D L FV EY R++ E R +++
Sbjct: 61 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS 120
Query: 416 GLAFMH-RHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT--DYVSTRWYRAPE 472
L ++H +RD+K ENL+ +KI DFGL +E T + T Y APE
Sbjct: 121 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 180
Query: 473 VL 474
VL
Sbjct: 181 VL 182
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI 454
QV QG+AF+ HRD+ N+L + KI DFGLAR+I
Sbjct: 166 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 208
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 55/126 (43%), Gaps = 7/126 (5%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESI-IRNMMYQ- 412
K K H NLV+L + D L V+ Y +L + D P S R + Q
Sbjct: 73 KVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQG 132
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE----IRSRPYTDYVSTRWY 468
G+ F+H + HRD+K N+L KI+DFGLAR + + V T Y
Sbjct: 133 AANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAY 192
Query: 469 RAPEVL 474
APE L
Sbjct: 193 XAPEAL 198
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
Query: 384 EYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELV 443
+Y+++N + ++D++ I +++QV G+ ++ F HRD+ N+L +
Sbjct: 100 KYLQQNRH--VKDKN-------IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA 150
Query: 444 KIADFGLAREIRS--RPYTDYVSTRW---YRAPEVL 474
KI+DFGL++ +R+ Y +W + APE +
Sbjct: 151 KISDFGLSKALRADENXYKAQTHGKWPVKWYAPECI 186
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 22/138 (15%)
Query: 360 KLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLI-----------RDRDKFLPESI-- 405
+L H N+V L V+ ++ L +F Y +L++ + D D+ + ++
Sbjct: 85 RLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP 144
Query: 406 --IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY---- 459
+++ Q+ G+ ++ H H+D+ N+L VKI+D GL RE+ + Y
Sbjct: 145 PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 204
Query: 460 -TDYVSTRWYRAPEVLLH 476
+ RW APE +++
Sbjct: 205 GNSLLPIRWM-APEAIMY 221
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
Query: 384 EYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELV 443
+Y+++N + ++D++ I +++QV G+ ++ F HRD+ N+L +
Sbjct: 94 KYLQQNRH--VKDKN-------IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA 144
Query: 444 KIADFGLAREIRSRP--YTDYVSTRW---YRAPEVL 474
KI+DFGL++ +R+ Y +W + APE +
Sbjct: 145 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 180
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY +Y+ ++ +F E + ++ L++
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF-DEQRTATYITELANALSY 127
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLA 451
H HRD+KPENLL +KIADFG +
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFGWS 159
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
Query: 384 EYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELV 443
+Y+++N + ++D++ I +++QV G+ ++ F HRD+ N+L +
Sbjct: 106 KYLQQNRH--VKDKN-------IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA 156
Query: 444 KIADFGLAREIRSRP--YTDYVSTRW---YRAPEVL 474
KI+DFGL++ +R+ Y +W + APE +
Sbjct: 157 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 192
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+ L+ H L LK + +D L FV EY R++ E R +++
Sbjct: 200 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS 259
Query: 416 GLAFMH-RHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT--DYVSTRWYRAPE 472
L ++H +RD+K ENL+ +KI DFGL +E T + T Y APE
Sbjct: 260 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE 319
Query: 473 VL 474
VL
Sbjct: 320 VL 321
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
Query: 384 EYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELV 443
+Y+++N + ++D++ I +++QV G+ ++ F HRD+ N+L +
Sbjct: 96 KYLQQNRH--VKDKN-------IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA 146
Query: 444 KIADFGLAREIRSRP--YTDYVSTRW---YRAPEVL 474
KI+DFGL++ +R+ Y +W + APE +
Sbjct: 147 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 182
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
Query: 384 EYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELV 443
+Y+++N + ++D++ I +++QV G+ ++ F HRD+ N+L +
Sbjct: 100 KYLQQNRH--VKDKN-------IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA 150
Query: 444 KIADFGLAREIRSRP--YTDYVSTRW---YRAPEVL 474
KI+DFGL++ +R+ Y +W + APE +
Sbjct: 151 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 186
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+ L+ H L LK + +D L FV EY R++ E R +++
Sbjct: 203 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS 262
Query: 416 GLAFMH-RHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT--DYVSTRWYRAPE 472
L ++H +RD+K ENL+ +KI DFGL +E T + T Y APE
Sbjct: 263 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE 322
Query: 473 VL 474
VL
Sbjct: 323 VL 324
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 366 LVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFL-PESIIRNMMYQVLQGLAFMHRH 423
L +L + D LYFV EY+ +L I+ +F P ++ ++ GL F+
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF--YAAEIAIGLFFLQSK 461
Query: 424 GFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT--DYVSTRWYRAPEVLLH 476
G +RD+K +N++ +KIADFG+ +E T + T Y APE++ +
Sbjct: 462 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAY 516
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
Query: 384 EYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELV 443
+Y+++N + ++D++ I +++QV G+ ++ F HRD+ N+L +
Sbjct: 114 KYLQQNRH--VKDKN-------IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA 164
Query: 444 KIADFGLAREIRSRP--YTDYVSTRW---YRAPEVL 474
KI+DFGL++ +R+ Y +W + APE +
Sbjct: 165 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 200
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
Query: 384 EYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELV 443
+Y+++N + ++D++ I +++QV G+ ++ F HRD+ N+L +
Sbjct: 116 KYLQQNRH--VKDKN-------IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA 166
Query: 444 KIADFGLAREIRSRP--YTDYVSTRW---YRAPEVL 474
KI+DFGL++ +R+ Y +W + APE +
Sbjct: 167 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 202
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
Query: 384 EYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELV 443
+Y+++N + ++D++ I +++QV G+ ++ F HRD+ N+L +
Sbjct: 116 KYLQQNRH--VKDKN-------IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA 166
Query: 444 KIADFGLAREIRSRP--YTDYVSTRW---YRAPEVL 474
KI+DFGL++ +R+ Y +W + APE +
Sbjct: 167 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 202
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 372 VIRENDTLYFVFEYMKENL---YQLIRDRDKFLPESIIRNMMYQVLQGLAFMH-RHGFFH 427
+ RE D ++ E M +L Y+ + D+ + +PE I+ + +++ L +H + H
Sbjct: 75 LFREGD-VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIH 133
Query: 428 RDMKPENLLCMGTELVKIADFGLA 451
RD+KP N+L VK+ DFG++
Sbjct: 134 RDVKPSNVLINALGQVKMCDFGIS 157
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 338 ILSRHVSSRDEMVVC-FYRKSLKKLSHAN--LVKLKEVIRENDTLYFVFEYMKE-NLYQL 393
IL + V +D+ V C K + L L +L + D LYFV EY+ +L
Sbjct: 52 ILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYH 111
Query: 394 IRDRDKFL-PESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
I+ +F P ++ ++ GL F+ G +RD+K +N++ +KIADFG+ +
Sbjct: 112 IQQVGRFKEPHAVF--YAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 169
Query: 453 EIRSRPYT--DYVSTRWYRAPEVLLHS 477
E T + T Y APE++ +
Sbjct: 170 ENIWDGVTTKXFCGTPDYIAPEIIAYQ 196
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 366 LVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHG 424
LV L + L+ + +Y+ L+ + R++F E ++ + +++ L +H+ G
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQRERF-TEHEVQIYVGEIVLALEHLHKLG 179
Query: 425 FFHRDMKPENLLCMGTELVKIADFGLAREIRS----RPYTDYVSTRWYRAPEVL 474
+RD+K EN+L V + DFGL++E + R Y D+ T Y AP+++
Sbjct: 180 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY-DFCGTIEYMAPDIV 232
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 390 LYQLIRDR-DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG---TELVKI 445
L+ I+DR D+ E +M + + + ++H HRD+KPENLL ++K+
Sbjct: 102 LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 161
Query: 446 ADFGLAREIRSRPY 459
DFG A+E Y
Sbjct: 162 TDFGFAKETTGEKY 175
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ + + + E+M+ L +R D + M+ + G
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 130
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR---EIRSRPYTDY-----VSTRWY 468
+ ++ + HRD+ N+L + K++DFGL+R E S P + RW
Sbjct: 131 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRW- 189
Query: 469 RAPEVL 474
APE +
Sbjct: 190 TAPEAI 195
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 24/121 (19%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESI----------- 405
LK+++H +++KL ++ L + EY K +L +R+ K P +
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 406 ------------IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE 453
+ + +Q+ QG+ ++ HRD+ N+L +KI+DFGL+R+
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 454 I 454
+
Sbjct: 200 V 200
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 397 RDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS 456
+++ + + I +++QV G+ ++ F HRD+ N+L + KI+DFGL++ +R+
Sbjct: 463 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 522
Query: 457 RP--YTDYVSTRW---YRAPEVL 474
Y +W + APE +
Sbjct: 523 DENYYKAQTHGKWPVKWYAPECI 545
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYFVFEYMKENLYQLIRDRDKFLPESI--IRNMMY 411
LK L H N+VK K V R N L + EY+ Y +RD + E I I+ + Y
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLP---YGSLRDYLQAHAERIDHIKLLQY 122
Query: 412 --QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
Q+ +G+ ++ + HRD+ N+L VKI DFGL +
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK 165
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 397 RDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS 456
+++ + + I +++QV G+ ++ F HRD+ N+L + KI+DFGL++ +R+
Sbjct: 462 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 521
Query: 457 RP--YTDYVSTRW---YRAPEVL 474
Y +W + APE +
Sbjct: 522 DENYYKAQTHGKWPVKWYAPECI 544
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 366 LVKLKEVIRENDTLYFVFEY-MKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHG 424
+ L ++++ LY V +Y + +L L+ + LPE + R + +++ + +H+
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 425 FFHRDMKPENLLCMGTELVKIADFG 449
+ HRD+KP+N+L +++ADFG
Sbjct: 196 YVHRDIKPDNILMDMNGHIRLADFG 220
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N++ L+ V+ ++ + + E+M+ L +R D + M+ + G
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 121
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR---EIRSRP-YTDYVST----RWY 468
+ ++ + HR + N+L + K++DFGL+R + S P YT + RW
Sbjct: 122 MKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW- 180
Query: 469 RAPEVLLHSTAYSA 482
APE + + SA
Sbjct: 181 TAPEAIQYRKFTSA 194
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYFVFEYMKENLYQLIRDRDKFLPESI--IRNMMY 411
LK L H N+VK K V R N L + EY+ Y +RD + E I I+ + Y
Sbjct: 72 LKSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQY 126
Query: 412 --QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
Q+ +G+ ++ + HRD+ N+L VKI DFGL +
Sbjct: 127 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK 169
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYFVFEYMKENLYQLIRDRDKFLPESI--IRNMMY 411
LK L H N+VK K V R N L + EY+ Y +RD + E I I+ + Y
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQY 122
Query: 412 --QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
Q+ +G+ ++ + HRD+ N+L VKI DFGL +
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK 165
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYFVFEYMKENLYQLIRDRDKFLPESI--IRNMMY 411
LK L H N+VK K V R N L + EY+ Y +RD + E I I+ + Y
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQY 119
Query: 412 --QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
Q+ +G+ ++ + HRD+ N+L VKI DFGL +
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK 162
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYFVFEYMKENLYQLIRDRDKFLPESI--IRNMMY 411
LK L H N+VK K V R N L + EY+ Y +RD + E I I+ + Y
Sbjct: 64 LKSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQY 118
Query: 412 --QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
Q+ +G+ ++ + HRD+ N+L VKI DFGL +
Sbjct: 119 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK 161
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYFVFEYMKENLYQLIRDRDKFLPESI--IRNMMY 411
LK L H N+VK K V R N L + EY+ Y +RD + E I I+ + Y
Sbjct: 63 LKSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQY 117
Query: 412 --QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
Q+ +G+ ++ + HRD+ N+L VKI DFGL +
Sbjct: 118 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK 160
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYFVFEYMKENLYQLIRDRDKFLPESI--IRNMMY 411
LK L H N+VK K V R N L + EY+ Y +RD + E I I+ + Y
Sbjct: 96 LKSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQY 150
Query: 412 --QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
Q+ +G+ ++ + HRD+ N+L VKI DFGL +
Sbjct: 151 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK 193
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYFVFEYMKENLYQLIRDRDKFLPESI--IRNMMY 411
LK L H N+VK K V R N L + EY+ Y +RD + E I I+ + Y
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQY 119
Query: 412 --QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
Q+ +G+ ++ + HRD+ N+L VKI DFGL +
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK 162
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYFVFEYMKENLYQLIRDRDKFLPESI--IRNMMY 411
LK L H N+VK K V R N L + EY+ Y +RD + E I I+ + Y
Sbjct: 70 LKSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQY 124
Query: 412 --QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
Q+ +G+ ++ + HRD+ N+L VKI DFGL +
Sbjct: 125 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK 167
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 24/121 (19%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESI----------- 405
LK+++H +++KL ++ L + EY K +L +R+ K P +
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 406 ------------IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE 453
+ + +Q+ QG+ ++ HRD+ N+L +KI+DFGL+R+
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 454 I 454
+
Sbjct: 200 V 200
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYFVFEYMKENLYQLIRDRDKFLPESI--IRNMMY 411
LK L H N+VK K V R N L + EY+ Y +RD + E I I+ + Y
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQY 137
Query: 412 --QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
Q+ +G+ ++ + HRD+ N+L VKI DFGL +
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK 180
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYFVFEYMKENLYQLIRDRDKFLPESI--IRNMMY 411
LK L H N+VK K V R N L + EY+ Y +RD + E I I+ + Y
Sbjct: 71 LKSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQY 125
Query: 412 --QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
Q+ +G+ ++ + HRD+ N+L VKI DFGL +
Sbjct: 126 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK 168
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYFVFEYMKENLYQLIRDRDKFLPESI--IRNMMY 411
LK L H N+VK K V R N L + EY+ Y +RD + E I I+ + Y
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQY 137
Query: 412 --QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
Q+ +G+ ++ + HRD+ N+L VKI DFGL +
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK 180
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYFVFEYMKENLYQLIRDRDKFLPESI--IRNMMY 411
LK L H N+VK K V R N L + EY+ Y +RD + E I I+ + Y
Sbjct: 69 LKSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQY 123
Query: 412 --QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
Q+ +G+ ++ + HRD+ N+L VKI DFGL +
Sbjct: 124 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK 166
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYFVFEYMKENLYQLIRDRDKFLPESI--IRNMMY 411
LK L H N+VK K V R N L + EY+ Y +RD + E I I+ + Y
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQY 119
Query: 412 --QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
Q+ +G+ ++ + HRD+ N+L VKI DFGL +
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK 162
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 33/140 (23%)
Query: 379 LYFVFEYMKENLYQLIRDRD----------KFLPESIIRNMMYQVLQGLAFMHRHGFFHR 428
LY E NL L+ ++ ++ P S++R Q+ G+A +H HR
Sbjct: 84 LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR----QIASGVAHLHSLKIIHR 139
Query: 429 DMKPENLLC-----------MGTELVK--IADFGLAREIRSRPYT------DYVSTRWYR 469
D+KP+N+L G E ++ I+DFGL +++ S + + T +R
Sbjct: 140 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWR 199
Query: 470 APEVLLHSTAYSAPIHLSRS 489
APE+L S L+RS
Sbjct: 200 APELLEESNNLQTKRRLTRS 219
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 24/121 (19%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESI----------- 405
LK+++H +++KL ++ L + EY K +L +R+ K P +
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 406 ------------IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE 453
+ + +Q+ QG+ ++ HRD+ N+L +KI+DFGL+R+
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 454 I 454
+
Sbjct: 200 V 200
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 33/140 (23%)
Query: 379 LYFVFEYMKENLYQLIRDRD----------KFLPESIIRNMMYQVLQGLAFMHRHGFFHR 428
LY E NL L+ ++ ++ P S++R Q+ G+A +H HR
Sbjct: 84 LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR----QIASGVAHLHSLKIIHR 139
Query: 429 DMKPENLLC-----------MGTELVK--IADFGLAREIRSRPY------TDYVSTRWYR 469
D+KP+N+L G E ++ I+DFGL +++ S + T +R
Sbjct: 140 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWR 199
Query: 470 APEVLLHSTAYSAPIHLSRS 489
APE+L S L+RS
Sbjct: 200 APELLEESNNLQTKRRLTRS 219
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 100 LLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 159
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 160 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 219 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 254
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 128 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 187
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 188 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 247 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 282
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 24/157 (15%)
Query: 346 RDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRD-KFLPE 403
R+E+ V L+K H N++ + + D L V ++ + +LY+ + ++ KF
Sbjct: 80 RNEVAV------LRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMF 132
Query: 404 SIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYV 463
+I ++ Q QG+ ++H HRDMK N+ VKI DFGLA V
Sbjct: 133 QLI-DIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLAT----------V 181
Query: 464 STRWYRAPEVL--LHSTAYSAP--IHLSRSQQFLFYS 496
+RW + +V S + AP I + + F F S
Sbjct: 182 KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS 218
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 97 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 156
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 157 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 216 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 251
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 162
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 163 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 222 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 257
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 162
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 163 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 222 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 257
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 109 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 168
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 169 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 228 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 263
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 162
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 163 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 222 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 257
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 162
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 163 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 222 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 257
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 105 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 164
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 165 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 224 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 259
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 105 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 164
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 165 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 224 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 259
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 110 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 169
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 170 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 229 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 264
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 104 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 163
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 164 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 223 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 258
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 110 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 169
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 170 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 229 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 264
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 104 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 163
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 164 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 223 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 258
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 12/137 (8%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 162
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 163 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
Query: 499 HVPPIQTTCLLAGTERL 515
+P + + +L ERL
Sbjct: 222 GIPASEISSILEKGERL 238
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 106 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 165
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 166 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 225 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 260
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 12/137 (8%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 113 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 172
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 173 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
Query: 499 HVPPIQTTCLLAGTERL 515
+P + + +L ERL
Sbjct: 232 GIPASEISSILEKGERL 248
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 106 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 165
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 166 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 225 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 260
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 361 LSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L H N+++L + +Y + EY + LY+ ++ F E +M ++ L +
Sbjct: 80 LHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTF-DEQRTATIMEELADALMY 138
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLA 451
H HRD+KPENLL +KIADFG +
Sbjct: 139 CHGKKVIHRDIKPENLLLGLKGELKIADFGWS 170
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 107 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 166
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 167 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 226 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 261
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 137 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 196
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 197 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 256 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 291
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 17/162 (10%)
Query: 394 IRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR- 452
+R+ L + N Q+ +G++++ HRD+ N+L VKI DFGLAR
Sbjct: 109 VRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARL 168
Query: 453 -EIRSRPY---TDYVSTRWYRAPEVLL-----HSTAYSAPIHLSRSQQFLFYSIDHVPPI 503
+I Y V +W +L S +S + + F D +P
Sbjct: 169 LDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR 228
Query: 504 QTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLLAGTE 545
+ LL ERL P+ T V I C + +E
Sbjct: 229 EIPDLLEKGERLPQP-------PICTIDVYMIMVKCWMIDSE 263
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 106 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 165
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 166 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 225 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 260
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 19/163 (11%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 110 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 169
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 170 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
Query: 499 HVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 541
+P + + +L ERL P+ T V I C +
Sbjct: 229 GIPASEISSILEKGERLPQP-------PICTIDVYMIMVKCWM 264
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 12/137 (8%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
L +R+ + + N Q+ +G+ ++ HRD+ N+L + VKI DFG
Sbjct: 106 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 165
Query: 450 LAR-----EIRSRPYTDYVSTRWYRAPEVLLH------STAYSAPIHLSRSQQFLFYSID 498
LA+ E V +W A E +LH S +S + + F D
Sbjct: 166 LAKLLGAEEKEYHAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
Query: 499 HVPPIQTTCLLAGTERL 515
+P + + +L ERL
Sbjct: 225 GIPASEISSILEKGERL 241
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 390 LYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFG 449
LY ++RD L + R + ++++G+ ++H G H+D+K +N+ ++V I DFG
Sbjct: 116 LYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVV-ITDFG 174
Query: 450 L 450
L
Sbjct: 175 L 175
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA----REIRSRPYTDYV 463
++ Q QG+ ++H HRD+K N+ VKI DFGLA R S +
Sbjct: 113 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 172
Query: 464 STRWYRAPEVL 474
+ + APEV+
Sbjct: 173 GSILWMAPEVI 183
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA----REIRSRPYTDYV 463
++ Q QG+ ++H HRD+K N+ VKI DFGLA R S +
Sbjct: 110 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 169
Query: 464 STRWYRAPEVL 474
+ + APEV+
Sbjct: 170 GSILWMAPEVI 180
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN--LYQLIRDRDKFLPESIIRNMMYQ 412
++ L+K++ +V L D L V M + + PE+ +
Sbjct: 235 KQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAE 294
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI-RSRPYTDYVSTRWYRAP 471
+ GL +HR +RD+KPEN+L ++I+D GLA + + V T Y AP
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP 354
Query: 472 EVL 474
EV+
Sbjct: 355 EVV 357
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA----REIRSRPYTDYV 463
++ Q QG+ ++H HRD+K N+ VKI DFGLA R S +
Sbjct: 113 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 172
Query: 464 STRWYRAPEVL 474
+ + APEV+
Sbjct: 173 GSILWMAPEVI 183
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA----REIRSRPYTDYV 463
++ Q QG+ ++H HRD+K N+ VKI DFGLA R S +
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 167
Query: 464 STRWYRAPEVL 474
+ + APEV+
Sbjct: 168 GSILWMAPEVI 178
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA----REIRSRPYTDYV 463
++ Q QG+ ++H HRD+K N+ VKI DFGLA R S +
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 167
Query: 464 STRWYRAPEVL 474
+ + APEV+
Sbjct: 168 GSILWMAPEVI 178
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA----REIRSRPYTDYV 463
++ Q QG+ ++H HRD+K N+ VKI DFGLA R S +
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 167
Query: 464 STRWYRAPEVL 474
+ + APEV+
Sbjct: 168 GSILWMAPEVI 178
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 401 LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI-RSRPY 459
PE+ ++ GL +HR +RD+KPEN+L ++I+D GLA + +
Sbjct: 283 FPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI 342
Query: 460 TDYVSTRWYRAPEVL 474
V T Y APEV+
Sbjct: 343 KGRVGTVGYMAPEVV 357
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 51/163 (31%)
Query: 381 FVFEYMKENLYQ-LIRDRDKFLPESIIRNMMYQVLQGLAFMH-RHGFFHRDMKPEN-LLC 437
VFE + +L + +I+ + LP +++++ QVLQGL ++H + H D+KPEN L+C
Sbjct: 116 MVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMC 175
Query: 438 M-----------GTEL-----------------------------------VKIADFGLA 451
+ TE VKIAD G A
Sbjct: 176 VDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNA 235
Query: 452 REIRSRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQFLF 494
+ + +T+ + TR YR+ EVL+ YS P + + F
Sbjct: 236 CWVH-KHFTEDIQTRQYRSIEVLI-GAGYSTPADIWSTACMAF 276
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA----REIRSRPYTDYV 463
++ Q QG+ ++H HRD+K N+ VKI DFGLA R S +
Sbjct: 135 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 194
Query: 464 STRWYRAPEVL 474
+ + APEV+
Sbjct: 195 GSILWMAPEVI 205
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA----REIRSRPYTDYV 463
++ Q QG+ ++H HRD+K N+ VKI DFGLA R S +
Sbjct: 128 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 187
Query: 464 STRWYRAPEVL 474
+ + APEV+
Sbjct: 188 GSILWMAPEVI 198
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA----REIRSRPYTDYV 463
++ Q QG+ ++H HRD+K N+ VKI DFGLA R S +
Sbjct: 136 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 195
Query: 464 STRWYRAPEVL 474
+ + APEV+
Sbjct: 196 GSILWMAPEVI 206
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA----REIRSRPYTDYV 463
++ Q QG+ ++H HRD+K N+ VKI DFGLA R S +
Sbjct: 136 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 195
Query: 464 STRWYRAPEVL 474
+ + APEV+
Sbjct: 196 GSILWMAPEVI 206
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 16/138 (11%)
Query: 347 DEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESI 405
+E+V C LS +V L +RE + E ++ L QLI+ LPE
Sbjct: 99 EELVAC------AGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDR 151
Query: 406 IRNMMYQVLQGLAFMHRHGFFHRDMKPEN-LLCMGTELVKIADFGLAREI------RSRP 458
+ Q L+GL ++H H D+K +N LL + DFG A + +S
Sbjct: 152 ALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 211
Query: 459 YTDYV-STRWYRAPEVLL 475
DY+ T + APEV++
Sbjct: 212 TGDYIPGTETHMAPEVVM 229
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H +LV+L V + T+ V + M L + + + + ++ N Q+ +G
Sbjct: 94 MASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG 152
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
+ ++ HRD+ N+L VKI DFGLAR
Sbjct: 153 MMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLAR 188
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 33/129 (25%)
Query: 379 LYFVFEYMKENLYQLIRDRD----------KFLPESIIRNMMYQVLQGLAFMHRHGFFHR 428
LY E NL L+ ++ ++ P S++R Q+ G+A +H HR
Sbjct: 102 LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR----QIASGVAHLHSLKIIHR 157
Query: 429 DMKPENLLC-----------MGTELVK--IADFGLAREIRSRPY------TDYVSTRWYR 469
D+KP+N+L G E ++ I+DFGL +++ S + T +R
Sbjct: 158 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWR 217
Query: 470 APEVLLHST 478
APE+L ST
Sbjct: 218 APELLEEST 226
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 388 ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMH-RHGFFHRDMKPENLLCMGTELVKIA 446
+ Y+ + D+ + +PE I+ + +++ L +H + HRD+KP N+L VK
Sbjct: 120 DKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXC 179
Query: 447 DFGLAREIRSRPYTDY-VSTRWYRAPEVL---LHSTAYS 481
DFG++ + D + Y APE + L+ YS
Sbjct: 180 DFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYS 218
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 16/138 (11%)
Query: 347 DEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESI 405
+E+V C LS +V L +RE + E ++ L QLI+ LPE
Sbjct: 115 EELVAC------AGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDR 167
Query: 406 IRNMMYQVLQGLAFMHRHGFFHRDMKPEN-LLCMGTELVKIADFGLAREI------RSRP 458
+ Q L+GL ++H H D+K +N LL + DFG A + +S
Sbjct: 168 ALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 227
Query: 459 YTDYV-STRWYRAPEVLL 475
DY+ T + APEV++
Sbjct: 228 TGDYIPGTETHMAPEVVM 245
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA----REI 454
KF + +I ++ Q +G+ ++H HRD+K N+ VKI DFGLA R
Sbjct: 116 KFEMKKLI-DIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174
Query: 455 RSRPYTDYVSTRWYRAPEVL 474
S + + + APEV+
Sbjct: 175 GSHQFEQLSGSILWMAPEVI 194
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 33/129 (25%)
Query: 379 LYFVFEYMKENLYQLIRDRD----------KFLPESIIRNMMYQVLQGLAFMHRHGFFHR 428
LY E NL L+ ++ ++ P S++R Q+ G+A +H HR
Sbjct: 102 LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR----QIASGVAHLHSLKIIHR 157
Query: 429 DMKPENLLC-----------MGTELVK--IADFGLAREIRSRPY------TDYVSTRWYR 469
D+KP+N+L G E ++ I+DFGL +++ S + T +R
Sbjct: 158 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWR 217
Query: 470 APEVLLHST 478
APE+L ST
Sbjct: 218 APELLEEST 226
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 347 DEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESI 405
+E++ C L+ +V L +RE + E ++ L QL++++ LPE
Sbjct: 134 EELMAC------AGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQG-CLPEDR 186
Query: 406 IRNMMYQVLQGLAFMHRHGFFHRDMKPEN-LLCMGTELVKIADFGLAREI------RSRP 458
+ Q L+GL ++H H D+K +N LL + DFG A + +S
Sbjct: 187 ALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLL 246
Query: 459 YTDYV-STRWYRAPEVLL 475
DY+ T + APEV+L
Sbjct: 247 TGDYIPGTETHMAPEVVL 264
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA----REI 454
KF + +I ++ Q +G+ ++H HRD+K N+ VKI DFGLA R
Sbjct: 104 KFEMKKLI-DIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWS 162
Query: 455 RSRPYTDYVSTRWYRAPEVL 474
S + + + APEV+
Sbjct: 163 GSHQFEQLSGSILWMAPEVI 182
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 401 LPESIIRNMMY--QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRP 458
+ E++ R + Y + + GL H+ HRD+K +N+L IADFGLA + +
Sbjct: 126 IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGK 185
Query: 459 YT----DYVSTRWYRAPEVL 474
V TR Y APEVL
Sbjct: 186 SAGDTHGQVGTRRYMAPEVL 205
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 57/113 (50%), Gaps = 4/113 (3%)
Query: 366 LVKLKEVIRENDTLYFVFEY-MKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHG 424
+ L ++ + LY V +Y + +L L+ + LPE + R + +++ + +H+
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 211
Query: 425 FFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD---YVSTRWYRAPEVL 474
+ HRD+KP+N+L +++ADFG ++ V T Y +PE+L
Sbjct: 212 YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 264
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 57/113 (50%), Gaps = 4/113 (3%)
Query: 366 LVKLKEVIRENDTLYFVFEY-MKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHG 424
+ L ++ + LY V +Y + +L L+ + LPE + R + +++ + +H+
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 195
Query: 425 FFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD---YVSTRWYRAPEVL 474
+ HRD+KP+N+L +++ADFG ++ V T Y +PE+L
Sbjct: 196 YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 248
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 16/138 (11%)
Query: 347 DEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESI 405
+E+V C LS +V L +RE + E ++ L QLI+ LPE
Sbjct: 113 EELVAC------AGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDR 165
Query: 406 IRNMMYQVLQGLAFMHRHGFFHRDMKPEN-LLCMGTELVKIADFGLAREI------RSRP 458
+ Q L+GL ++H H D+K +N LL + DFG A + +S
Sbjct: 166 ALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 225
Query: 459 YTDYV-STRWYRAPEVLL 475
DY+ T + APEV++
Sbjct: 226 TGDYIPGTETHMAPEVVM 243
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA----REI 454
KF + +I ++ Q +G+ ++H HRD+K N+ VKI DFGLA R
Sbjct: 116 KFEMKKLI-DIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174
Query: 455 RSRPYTDYVSTRWYRAPEVL 474
S + + + APEV+
Sbjct: 175 GSHQFEQLSGSILWMAPEVI 194
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 379 LYFVFEYMKENLYQLIRDRDKFLP---ESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENL 435
+Y V E +L ++ + P +S +NM L+ + +H+HG H D+KP N
Sbjct: 84 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM----LEAVHTIHQHGIVHSDLKPANF 139
Query: 436 LCMGTELVKIADFGLAREIR----SRPYTDYVSTRWYRAPEVL 474
L + ++K+ DFG+A +++ S V T Y PE +
Sbjct: 140 LIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 379 LYFVFEYMKENLYQLIRDRDKFLP---ESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENL 435
+Y V E +L ++ + P +S +NM L+ + +H+HG H D+KP N
Sbjct: 131 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM----LEAVHTIHQHGIVHSDLKPANF 186
Query: 436 LCMGTELVKIADFGLAREIR----SRPYTDYVSTRWYRAPEVL 474
L + ++K+ DFG+A +++ S V T Y PE +
Sbjct: 187 LIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TDYV 463
M ++ G+A+++ F HRD+ N + VKI DFG+ R+I Y +
Sbjct: 135 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLL 194
Query: 464 STRWYRAPEVL 474
RW APE L
Sbjct: 195 PVRWM-APESL 204
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 12/74 (16%)
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------ 462
M ++ G+A+++ F HRD+ N + VKI DFG+ R+I TDY
Sbjct: 134 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE---TDYYRKGGK 190
Query: 463 --VSTRWYRAPEVL 474
+ RW APE L
Sbjct: 191 GLLPVRWM-APESL 203
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 358 LKKLSHANLVKLKEVI----RENDTLYFVFEYMKENLYQLIRDRDKFLPESI--IRNMMY 411
LK L H N+VK K V R N L + EY+ Y +RD + E I I+ + Y
Sbjct: 66 LKSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQY 120
Query: 412 --QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
Q+ +G+ ++ + HR++ N+L VKI DFGL +
Sbjct: 121 TSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTK 163
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY 462
M ++ G+A+++ + F HRD+ N + VKI DFG+ R+I TDY
Sbjct: 143 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE---TDY 193
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 12/74 (16%)
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY------ 462
M ++ G+A+++ F HRD+ N + VKI DFG+ R+I TDY
Sbjct: 135 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE---TDYYRKGGK 191
Query: 463 --VSTRWYRAPEVL 474
+ RW APE L
Sbjct: 192 GLLPVRWM-APESL 204
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 365 NLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHG 424
N++ +K R+ND + Y++ + I + F +R M + + L +H+ G
Sbjct: 81 NVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQE---VREYMLNLFKALKRIHQFG 137
Query: 425 FFHRDMKPENLLCMGTELVKIA--DFGLAR 452
HRD+KP N L L K A DFGLA+
Sbjct: 138 IVHRDVKPSNFL-YNRRLKKYALVDFGLAQ 166
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 379 LYFVFEYMKENLYQLIRDRDKFLP---ESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENL 435
+Y V E +L ++ + P +S +NM L+ + +H+HG H D+KP N
Sbjct: 131 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM----LEAVHTIHQHGIVHSDLKPANF 186
Query: 436 LCMGTELVKIADFGLAREIR----SRPYTDYVSTRWYRAPEVL 474
L + ++K+ DFG+A +++ S V T Y PE +
Sbjct: 187 LIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 379 LYFVFEYMKENLYQLIRDRDKFLP---ESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENL 435
+Y V E +L ++ + P +S +NM L+ + +H+HG H D+KP N
Sbjct: 131 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM----LEAVHTIHQHGIVHSDLKPANF 186
Query: 436 LCMGTELVKIADFGLAREIR 455
L + ++K+ DFG+A +++
Sbjct: 187 LIVDG-MLKLIDFGIANQMQ 205
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY 462
M ++ G+A+++ + F HRD+ N + VKI DFG+ R+I TDY
Sbjct: 143 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE---TDY 193
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY 462
M ++ G+A+++ + F HRD+ N + VKI DFG+ R+I TDY
Sbjct: 165 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE---TDY 215
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 22/135 (16%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-----KENLYQL---IRDRDKFLPESIIR-- 407
+K+ + ++V+L V+ + + E M K L L + + P S+ +
Sbjct: 73 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 132
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY----- 462
M ++ G+A+++ + F HRD+ N + VKI DFG+ R+I TDY
Sbjct: 133 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE---TDYYRKGG 189
Query: 463 ---VSTRWYRAPEVL 474
+ RW +PE L
Sbjct: 190 KGLLPVRWM-SPESL 203
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
++ L H LV L ++ + ++ V + + + ++ E ++ + +++ L
Sbjct: 69 MQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMAL 128
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI-RSRPYTDYVSTRWYRAPEVL 474
++ HRDMKP+N+L V I DF +A + R T T+ Y APE+
Sbjct: 129 DYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMF 186
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,330,152
Number of Sequences: 62578
Number of extensions: 946107
Number of successful extensions: 4192
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 1696
Number of HSP's gapped (non-prelim): 1776
length of query: 962
length of database: 14,973,337
effective HSP length: 108
effective length of query: 854
effective length of database: 8,214,913
effective search space: 7015535702
effective search space used: 7015535702
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)