RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy501
(962 letters)
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 215 bits (549), Expect = 5e-63
Identities = 52/131 (39%), Positives = 78/131 (59%), Gaps = 2/131 (1%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+ LK+L H NLV L EV R L+ VFEY + + + +PE +++++ +Q LQ
Sbjct: 54 RMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQ 113
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS--RPYTDYVSTRWYRAPEV 473
+ F H+H HRD+KPEN+L ++K+ DFG AR + Y D V+TRWYR+PE+
Sbjct: 114 AVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPEL 173
Query: 474 LLHSTAYSAPI 484
L+ T Y P+
Sbjct: 174 LVGDTQYGPPV 184
Score = 61.0 bits (149), Expect = 5e-10
Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 748 TLPLYTCYTLASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSL 806
+++ S + P+ P P+ S A+ L++ L +P++R T +Q L
Sbjct: 226 HQQVFSTNQYFSGVKIPDPE-DMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLL 283
Score = 46.8 bits (112), Expect = 2e-05
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVI 77
+ + + LRE++ LK+L H NLV L EV
Sbjct: 36 FLES-EDDPVIKKIALREIRMLKQLKHPNLVNLLEVF 71
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 206 bits (527), Expect = 9e-60
Identities = 49/131 (37%), Positives = 75/131 (57%), Gaps = 2/131 (1%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
K LK+L H NLV L EV ++ Y VFE++ + + L +++ ++Q++
Sbjct: 76 KLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIIN 135
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS--RPYTDYVSTRWYRAPEV 473
G+ F H H HRD+KPEN+L + +VK+ DFG AR + + Y D V+TRWYRAPE+
Sbjct: 136 GIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPEL 195
Query: 474 LLHSTAYSAPI 484
L+ Y +
Sbjct: 196 LVGDVKYGKAV 206
Score = 59.2 bits (144), Expect = 2e-09
Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Query: 755 YTLASNMNFKFPQFR-RVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSL 806
+ P+ + R P P S I L + L +P KRP + L
Sbjct: 253 NKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL 305
Score = 44.1 bits (105), Expect = 2e-04
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVI 77
+ + +RE+K LK+L H NLV L EV
Sbjct: 58 FLES-DDDKMVKKIAMREIKLLKQLRHENLVNLLEVC 93
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 179 bits (455), Expect = 3e-49
Identities = 48/140 (34%), Positives = 79/140 (56%), Gaps = 11/140 (7%)
Query: 356 KSLKKLSHANLVKLKEVIRENDT------LYFVFEYMKENLYQLIRDRDK---FLPESII 406
+ ++ + H N+V LK N L V EY+ E +Y+ R K +P +I
Sbjct: 84 QIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLI 143
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG-TELVKIADFGLAREIRS-RPYTDYVS 464
+ MYQ+L+ LA++H G HRD+KP+NLL + ++K+ DFG A+ + + P Y+
Sbjct: 144 KLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYIC 203
Query: 465 TRWYRAPEVLLHSTAYSAPI 484
+R+YRAPE++ +T Y+ I
Sbjct: 204 SRYYRAPELIFGATNYTTNI 223
Score = 63.9 bits (156), Expect = 1e-10
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 757 LASNMNFKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
+ M KFPQ R PF+ + P PDAI L+ +L Y PS R TA ++L
Sbjct: 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321
Score = 36.5 bits (85), Expect = 0.034
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 51 EEAMNLREVKSLKKLSHANLVKLKEVILDP 80
++ RE++ ++ + H N+V LK
Sbjct: 75 DKRFKNRELQIMRIVKHPNVVDLKAFFYSN 104
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 174 bits (444), Expect = 6e-49
Identities = 55/131 (41%), Positives = 78/131 (59%), Gaps = 2/131 (1%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
LK+L H+N+VKL +VI L VFE++ ++L +L+ + L ++ + Q+L
Sbjct: 52 SILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLN 111
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
G+A+ H HRD+KP+NLL +KIADFGLAR I R YT + T WYRAP+V
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDV 171
Query: 474 LLHSTAYSAPI 484
L+ S YS I
Sbjct: 172 LMGSKKYSTTI 182
Score = 59.4 bits (145), Expect = 1e-09
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 9/60 (15%)
Query: 748 TLPLYTCYTLASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
LP Y + F + +P+ S + I L+ ML +P++R TA+Q+L
Sbjct: 230 ELPKY---------DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280
Score = 38.6 bits (91), Expect = 0.006
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 56 LREVKSLKKLSHANLVKLKEVI 77
+RE+ LK+L H+N+VKL +VI
Sbjct: 48 IREISILKELKHSNIVKLYDVI 69
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 174 bits (443), Expect = 2e-48
Identities = 55/131 (41%), Positives = 80/131 (61%), Gaps = 2/131 (1%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
LK L HAN+V L ++I +L VFEY+ ++L Q + D + ++ ++Q+L+
Sbjct: 52 SLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLR 111
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GLA+ HR HRD+KP+NLL +K+ADFGLAR I ++ Y + V T WYR P++
Sbjct: 112 GLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDI 171
Query: 474 LLHSTAYSAPI 484
LL ST YS I
Sbjct: 172 LLGSTDYSTQI 182
Score = 60.7 bits (148), Expect = 6e-10
Identities = 9/46 (19%), Positives = 20/46 (43%)
Query: 762 NFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
+ +P++R S P D L+ +L + R +A+ ++
Sbjct: 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281
Score = 39.1 bits (92), Expect = 0.005
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 56 LREVKSLKKLSHANLVKLKEVI 77
+REV LK L HAN+V L ++I
Sbjct: 48 IREVSLLKDLKHANIVTLHDII 69
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 173 bits (442), Expect = 2e-48
Identities = 57/131 (43%), Positives = 82/131 (62%), Gaps = 2/131 (1%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
LK+L H N+V L +VI L VFE+M+++L +++ + L +S I+ +YQ+L+
Sbjct: 71 SLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLR 130
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
G+A H+H HRD+KP+NLL +K+ADFGLAR I R YT V T WYRAP+V
Sbjct: 131 GVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDV 190
Query: 474 LLHSTAYSAPI 484
L+ S YS +
Sbjct: 191 LMGSKKYSTSV 201
Score = 61.8 bits (151), Expect = 3e-10
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 748 TLPLYTCYTLASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
LPL+ F F + P++SIIP + I L+ +ML ++P+KR +A+ +++
Sbjct: 249 ELPLWK--------QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300
Score = 38.7 bits (91), Expect = 0.007
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 56 LREVKSLKKLSHANLVKLKEVI 77
+RE+ LK+L H N+V L +VI
Sbjct: 67 IREISLLKELHHPNIVSLIDVI 88
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 173 bits (440), Expect = 2e-48
Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 2/131 (1%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
LK+L H N+V+L +V+ + L VFE+ ++L + + L I+++ ++Q+L+
Sbjct: 53 CLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLK 112
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GL F H HRD+KP+NLL +K+A+FGLAR I R Y+ V T WYR P+V
Sbjct: 113 GLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDV 172
Query: 474 LLHSTAYSAPI 484
L + YS I
Sbjct: 173 LFGAKLYSTSI 183
Score = 54.4 bits (132), Expect = 6e-08
Identities = 9/45 (20%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 764 KFPQF-RRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
+P + +++P + L++++L NP +R +A+++L
Sbjct: 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282
Score = 38.7 bits (91), Expect = 0.006
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 56 LREVKSLKKLSHANLVKLKEVI 77
LRE+ LK+L H N+V+L +V+
Sbjct: 49 LREICLLKELKHKNIVRLHDVL 70
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 176 bits (448), Expect = 4e-48
Identities = 46/140 (32%), Positives = 81/140 (57%), Gaps = 11/140 (7%)
Query: 356 KSLKKLSHANLVKLKEVIRENDT------LYFVFEYMKENLYQLIRDRDK---FLPESII 406
+ ++KL H N+V+L+ + L V +Y+ E +Y++ R + LP +
Sbjct: 99 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 158
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRS-RPYTDYVS 464
+ MYQ+ + LA++H G HRD+KP+NLL T ++K+ DFG A+++ P Y+
Sbjct: 159 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 218
Query: 465 TRWYRAPEVLLHSTAYSAPI 484
+R+YRAPE++ +T Y++ I
Sbjct: 219 SRYYRAPELIFGATDYTSSI 238
Score = 64.7 bits (158), Expect = 6e-11
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 758 ASNMNFKFPQFRRVPFTSII-PHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
+ FKFPQ + P+T + P P+AI L +L Y P+ R T ++ +
Sbjct: 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336
Score = 36.2 bits (84), Expect = 0.049
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 51 EEAMNLREVKSLKKLSHANLVKLKEVILDP 80
++ RE++ ++KL H N+V+L+
Sbjct: 90 DKRFKNRELQIMRKLDHCNIVRLRYFFYSS 119
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 173 bits (440), Expect = 9e-48
Identities = 52/131 (39%), Positives = 77/131 (58%), Gaps = 2/131 (1%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
K L++LSH N++ L + + VF++M+ +L +I+D L S I+ M LQ
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQ 123
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPEV 473
GL ++H+H HRD+KP NLL ++K+ADFGLA+ +R YT V TRWYRAPE+
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPEL 183
Query: 474 LLHSTAYSAPI 484
L + Y +
Sbjct: 184 LFGARMYGVGV 194
Score = 59.1 bits (144), Expect = 2e-09
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSL 806
F F +P I A D + L++ + +NP R TA Q+L
Sbjct: 249 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQAL 290
Score = 39.1 bits (92), Expect = 0.005
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 56 LREVKSLKKLSHANLVKLKEVI 77
LRE+K L++LSH N++ L +
Sbjct: 60 LREIKLLQELSHPNIIGLLDAF 81
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 171 bits (435), Expect = 1e-47
Identities = 58/132 (43%), Positives = 84/132 (63%), Gaps = 3/132 (2%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDR-DKFLPESIIRNMMYQVL 414
LK+L+H N+VKL +VI + LY VFE++ ++L + + +P +I++ ++Q+L
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWYRAPE 472
QGLAF H H HRD+KP+NLL +K+ADFGLAR + R YT V T WYRAPE
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 473 VLLHSTAYSAPI 484
+LL + YS +
Sbjct: 174 ILLGAKYYSTAV 185
Score = 60.2 bits (147), Expect = 8e-10
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 9/60 (15%)
Query: 748 TLPLYTCYTLASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
++P Y FP++ R F+ ++P D L+ ML Y+P+KR +A+ +L+
Sbjct: 233 SMPDY---------KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Score = 38.3 bits (90), Expect = 0.008
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 56 LREVKSLKKLSHANLVKLKEVI 77
+RE+ LK+L+H N+VKL +VI
Sbjct: 50 IREISLLKELNHPNIVKLLDVI 71
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 168 bits (428), Expect = 2e-46
Identities = 53/136 (38%), Positives = 79/136 (58%), Gaps = 7/136 (5%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDR-----DKFLPESIIRNMM 410
+K+L H N+V+L +VI + L VFE+M +L + + R + L ++++
Sbjct: 55 SLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQ 114
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE--IRSRPYTDYVSTRWY 468
+Q+LQGLAF H + HRD+KP+NLL +K+ DFGLAR I ++ V T WY
Sbjct: 115 WQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWY 174
Query: 469 RAPEVLLHSTAYSAPI 484
RAP+VL+ S YS I
Sbjct: 175 RAPDVLMGSRTYSTSI 190
Score = 50.3 bits (121), Expect = 2e-06
Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 14/65 (21%)
Query: 748 TLPLYTCYTLASNMNFKFPQFRRVPFTSIIPHA-----SPDAIHLMESMLAYNPSKRPTA 802
LP Y N Q ++ + + + +L NP R +A
Sbjct: 238 KLPKY---------NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSA 288
Query: 803 QQSLS 807
+Q+L
Sbjct: 289 KQALH 293
Score = 38.7 bits (91), Expect = 0.006
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 56 LREVKSLKKLSHANLVKLKEVI 77
+RE+ +K+L H N+V+L +VI
Sbjct: 51 IREISLMKELKHENIVRLYDVI 72
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 167 bits (424), Expect = 6e-46
Identities = 53/136 (38%), Positives = 81/136 (59%), Gaps = 8/136 (5%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
LK+L H N+++LK VI N L+ +FEY + +L + + D++ + +I++ +YQ++
Sbjct: 85 SLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYM-DKNPDVSMRVIKSFLYQLIN 143
Query: 416 GLAFMHRHGFFHRDMKPENLL-----CMGTELVKIADFGLARE--IRSRPYTDYVSTRWY 468
G+ F H HRD+KP+NLL T ++KI DFGLAR I R +T + T WY
Sbjct: 144 GVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWY 203
Query: 469 RAPEVLLHSTAYSAPI 484
R PE+LL S YS +
Sbjct: 204 RPPEILLGSRHYSTSV 219
Score = 52.6 bits (127), Expect = 3e-07
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 765 FPQFRRVPFTSIIPHA-SPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP+FR ++ + + L+ +ML +P KR +A+ +L
Sbjct: 275 FPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318
Score = 38.8 bits (91), Expect = 0.007
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 56 LREVKSLKKLSHANLVKLKEVI 77
+REV LK+L H N+++LK VI
Sbjct: 81 IREVSLLKELQHRNIIELKSVI 102
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 157 bits (400), Expect = 6e-43
Identities = 54/136 (39%), Positives = 77/136 (56%), Gaps = 8/136 (5%)
Query: 356 KSLKKLSHANLVKLKEVIRENDT-----LYFVFEYMKENLYQLIRDR-DKFLPESIIRNM 409
+ L+ H N+V+L +V + T + VFE++ ++L + LP I+++
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 125
Query: 410 MYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS-RPYTDYVSTRWY 468
M Q L+GL F+H + HRD+KPEN+L VK+ADFGLAR T V T WY
Sbjct: 126 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWY 185
Query: 469 RAPEVLLHSTAYSAPI 484
RAPEVLL ST Y+ P+
Sbjct: 186 RAPEVLLQST-YATPV 200
Score = 62.2 bits (152), Expect = 2e-10
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 762 NFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP P S++P L+ ML +NP KR +A ++L
Sbjct: 251 RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296
Score = 33.7 bits (78), Expect = 0.24
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Query: 56 LREVKSLKKLS---HANLVKLKEVILDPPLHAYFQV 88
+REV L++L H N+V+L +V +V
Sbjct: 59 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKV 94
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 158 bits (401), Expect = 8e-43
Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 8/136 (5%)
Query: 356 KSLKKLSHANLVKLKEVI-----RENDTLYFVFEYMKENLYQLIRD-RDKFLPESIIRNM 409
+ L+ H N+V+L +V L VFE++ ++L + + +P I++M
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 410 MYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS-RPYTDYVSTRWY 468
M+Q+L+GL F+H H HRD+KP+N+L + +K+ADFGLAR T V T WY
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWY 185
Query: 469 RAPEVLLHSTAYSAPI 484
RAPEVLL S+ Y+ P+
Sbjct: 186 RAPEVLLQSS-YATPV 200
Score = 60.3 bits (147), Expect = 1e-09
Identities = 11/46 (23%), Positives = 17/46 (36%)
Query: 762 NFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
F P + L+ L +NP+KR +A +LS
Sbjct: 251 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296
Score = 33.3 bits (77), Expect = 0.32
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Query: 56 LREVKSLKKLS---HANLVKLKEVILDPPLHAYFQV 88
+REV L+ L H N+V+L +V ++
Sbjct: 59 IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL 94
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 158 bits (401), Expect = 1e-42
Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 14/143 (9%)
Query: 356 KSLKKLSHANLVKLKEVIREN--------DTLYFVFEYMKENLYQLIRDRDKFLPESIIR 407
K L+ L H N+V L E+ R ++Y VF++ + +L L+ + S I+
Sbjct: 68 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK 127
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI------RSRPYTD 461
+M +L GL ++HR+ HRDMK N+L ++K+ADFGLAR + YT+
Sbjct: 128 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTN 187
Query: 462 YVSTRWYRAPEVLLHSTAYSAPI 484
V T WYR PE+LL Y PI
Sbjct: 188 RVVTLWYRPPELLLGERDYGPPI 210
Score = 50.3 bits (121), Expect = 2e-06
Identities = 9/60 (15%), Positives = 23/60 (38%), Gaps = 10/60 (16%)
Query: 749 LPLYTCYTLASNMNFKFPQFRRVPFTSIIPH--ASPDAIHLMESMLAYNPSKRPTAQQSL 806
LY + + ++ + P A+ L++ +L +P++R + +L
Sbjct: 259 YELYE--------KLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 310
Score = 38.4 bits (90), Expect = 0.010
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 54 MNLREVKSLKKLSHANLVKLKEVILDPPL 82
LRE+K L+ L H N+V L E+
Sbjct: 62 TALREIKILQLLKHENVVNLIEICRTKAS 90
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 155 bits (394), Expect = 3e-41
Identities = 49/146 (33%), Positives = 83/146 (56%), Gaps = 19/146 (13%)
Query: 358 LKKLSHANLVKLKEVIRE--NDTLYFVFEYMKENLYQLIR--------DRDKFLPESIIR 407
L++L H N++ L++V + ++ +F+Y + +L+ +I+ + LP +++
Sbjct: 72 LRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVK 131
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE----LVKIADFGLAREIRS--RPYTD 461
+++YQ+L G+ ++H + HRD+KP N+L MG VKIAD G AR S +P D
Sbjct: 132 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 191
Query: 462 Y---VSTRWYRAPEVLLHSTAYSAPI 484
V T WYRAPE+LL + Y+ I
Sbjct: 192 LDPVVVTFWYRAPELLLGARHYTKAI 217
Score = 45.6 bits (108), Expect = 5e-05
Identities = 11/62 (17%), Positives = 23/62 (37%)
Query: 746 LHTLPLYTCYTLASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQS 805
+ +P ++ N A HL++ +L +P KR T++Q+
Sbjct: 272 IKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA 331
Query: 806 LS 807
+
Sbjct: 332 MQ 333
Score = 37.5 bits (87), Expect = 0.017
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 55 NLREVKSLKKLSHANLVKLKEVILDPPLHAYFQV 88
RE+ L++L H N++ L++V L + +
Sbjct: 65 ACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 146 bits (371), Expect = 2e-38
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 8/139 (5%)
Query: 354 YR--KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESII 406
R + L H N++ L+++ LY V E M+ +L Q+I D+ + I
Sbjct: 77 LREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHI 136
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-TDYVST 465
+ MY +L GL +H G HRD+ P N+L + I DF LARE + T YV+
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH 196
Query: 466 RWYRAPEVLLHSTAYSAPI 484
RWYRAPE+++ ++ +
Sbjct: 197 RWYRAPELVMQFKGFTKLV 215
Score = 61.6 bits (150), Expect = 4e-10
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 765 FPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
+T+++P A P A+ L+ ML +NP +R + +Q+L
Sbjct: 274 LSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316
Score = 31.9 bits (73), Expect = 1.1
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDPPLHAY 85
LRE++ L H N++ L+++ + A
Sbjct: 77 LREIRLLNHFHHPNILGLRDIFVHFEEPAM 106
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 144 bits (366), Expect = 7e-38
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 14/143 (9%)
Query: 356 KSLKKLSHANLVKLKEVIRENDT-------LYFVFEYMKENLYQLIRDRDKF---LPESI 405
+ L L H N+V+L+ L V EY+ + L++ R+ + P +
Sbjct: 71 QDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPIL 130
Query: 406 IRNMMYQVLQGLAFMHR--HGFFHRDMKPENLLC-MGTELVKIADFGLAREI-RSRPYTD 461
I+ ++Q+++ + +H HRD+KP N+L +K+ DFG A+++ S P
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA 190
Query: 462 YVSTRWYRAPEVLLHSTAYSAPI 484
Y+ +R+YRAPE++ + Y+ +
Sbjct: 191 YICSRYYRAPELIFGNQHYTTAV 213
Score = 57.3 bits (139), Expect = 1e-08
Identities = 9/52 (17%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Query: 760 NMNFKFPQFRRVP----FTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
+ + + +P F+ + +A L+ ++L Y P +R ++L
Sbjct: 263 HTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314
Score = 30.3 bits (69), Expect = 3.4
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDP 80
L+ ++ L L H N+V+L+
Sbjct: 67 LQIMQDLAVLHHPNIVQLQSYFYTL 91
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 137 bits (347), Expect = 2e-35
Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 14/143 (9%)
Query: 354 YR--KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESII 406
R K L + H N++ + ++IR + +Y V + M+ +LY+L++ + L I
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHI 130
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-----TD 461
+YQ+L+GL ++H HRD+KP NLL T +KI DFGLAR T+
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 462 YVSTRWYRAPEVLLHSTAYSAPI 484
YV+TRWYRAPE++L+S Y+ I
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSI 213
Score = 61.9 bits (151), Expect = 3e-10
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P +VP+ + P+A A+ L++ ML +NP KR +Q+L+
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
Score = 31.9 bits (73), Expect = 0.95
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDPPLHAY 85
LRE+K L + H N++ + ++I P +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQM 102
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 139 bits (352), Expect = 2e-35
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 35/161 (21%)
Query: 358 LKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQ 412
L +L+H ++VK+ +++ + D LY V E + +L R L E I+ ++Y
Sbjct: 106 LNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVY-LTELHIKTLLYN 164
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI------------------ 454
+L G+ ++H G HRD+KP N L VK+ DFGLAR +
Sbjct: 165 LLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 455 -----------RSRPYTDYVSTRWYRAPEVLLHSTAYSAPI 484
R T +V TRWYRAPE++L Y+ I
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAI 265
Score = 65.2 bits (159), Expect = 4e-11
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A FP+ P +S DAIHL++ ML +NP+KR T + L+
Sbjct: 347 AKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLA 396
Score = 33.6 bits (77), Expect = 0.31
Identities = 8/30 (26%), Positives = 20/30 (66%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDPPLHAY 85
LRE+ L +L+H ++VK+ ++++ + +
Sbjct: 100 LREIAILNRLNHDHVVKVLDIVIPKDVEKF 129
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 136 bits (345), Expect = 4e-35
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 21/150 (14%)
Query: 354 YR--KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESII 406
R K LK H N++ + + R + +Y + E M+ +L+++I + L + I
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM--LSDDHI 114
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY------- 459
+ +YQ L+ + +H HRD+KP NLL +K+ DFGLAR I
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 460 -----TDYVSTRWYRAPEVLLHSTAYSAPI 484
++V+TRWYRAPEV+L S YS +
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAM 204
Score = 63.8 bits (156), Expect = 7e-11
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A P + P + P +P I L++ ML ++P+KR TA+++L
Sbjct: 256 AREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Score = 31.8 bits (73), Expect = 1.1
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDPPLHAY 85
LRE+K LK H N++ + + +
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENF 86
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 136 bits (344), Expect = 4e-35
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 12/139 (8%)
Query: 354 YR--KSLKKLSHANLVKLKEVIR------ENDTLYFVFEYMKENLYQLIRDRDKFLPESI 405
YR LK + H N++ L +V Y V +M+ +L +++ + E
Sbjct: 71 YRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK---FSEEK 127
Query: 406 IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST 465
I+ ++YQ+L+GL ++H G HRD+KP NL +KI DFGLAR T YV T
Sbjct: 128 IQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA-DAEMTGYVVT 186
Query: 466 RWYRAPEVLLHSTAYSAPI 484
RWYRAPEV+L Y+ +
Sbjct: 187 RWYRAPEVILSWMHYNQTV 205
Score = 62.3 bits (152), Expect = 3e-10
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A + PQ R FT + P ASP A L+E ML + KR TA Q+L+
Sbjct: 256 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305
Score = 32.3 bits (74), Expect = 0.86
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDPPLHAYFQ 87
RE+ LK + H N++ L +V F
Sbjct: 71 YRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 136 bits (344), Expect = 6e-35
Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 11/139 (7%)
Query: 354 YR--KSLKKLSHANLVKLKEVIR------ENDTLYFVFEYMKENLYQLIRDRDKFLPESI 405
YR + LK + H N++ L +V E + +Y V M +L +++ + L +
Sbjct: 76 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDH 133
Query: 406 IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST 465
++ ++YQ+L+GL ++H HRD+KP NL +KI DFGLAR + T YV+T
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-ADEMTGYVAT 192
Query: 466 RWYRAPEVLLHSTAYSAPI 484
RWYRAPE++L+ Y+ +
Sbjct: 193 RWYRAPEIMLNWMHYNQTV 211
Score = 61.2 bits (149), Expect = 7e-10
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N Q ++ F ++ A+P A+ L+E ML + KR TA Q+L+
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311
Score = 31.9 bits (73), Expect = 1.0
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDPPLHAYFQ 87
RE++ LK + H N++ L +V F
Sbjct: 76 YRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 135 bits (343), Expect = 9e-35
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 11/139 (7%)
Query: 354 YR--KSLKKLSHANLVKLKEVIRENDT------LYFVFEYMKENLYQLIRDRDKFLPESI 405
YR + LK + H N++ L +V ++T Y V +M +L +L++ L E
Sbjct: 72 YRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK--LGEDR 129
Query: 406 IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST 465
I+ ++YQ+L+GL ++H G HRD+KP NL +KI DFGLAR+ S T YV T
Sbjct: 130 IQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-MTGYVVT 188
Query: 466 RWYRAPEVLLHSTAYSAPI 484
RWYRAPEV+L+ Y+ +
Sbjct: 189 RWYRAPEVILNWMRYTQTV 207
Score = 62.0 bits (151), Expect = 3e-10
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
A N P+ + F SI+ +ASP A++L+E ML + +R TA ++L+
Sbjct: 258 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307
Score = 32.7 bits (75), Expect = 0.59
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDPPLHAYFQ 87
RE++ LK + H N++ L +V F
Sbjct: 72 YRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 134 bits (339), Expect = 1e-34
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 32/157 (20%)
Query: 354 YR--KSLKKLSHANLVKLKEVIR--------------ENDTLYFVFEYMKENLYQLIRDR 397
R K +++L H N+VK+ E++ E +++Y V EYM+ +L ++
Sbjct: 56 LREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG 115
Query: 398 DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLL-----CMGTELVKIADFGLAR 452
L E R MYQ+L+GL ++H HRD+KP NL + +KI DFGLAR
Sbjct: 116 P--LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLV----LKIGDFGLAR 169
Query: 453 EIRSRPY-----TDYVSTRWYRAPEVLLHSTAYSAPI 484
+ ++ + T+WYR+P +LL Y+ I
Sbjct: 170 IMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAI 206
Score = 61.5 bits (150), Expect = 3e-10
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 766 PQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
P T ++P S +A+ +E +L ++P R TA+++LS
Sbjct: 264 MTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305
Score = 31.5 bits (72), Expect = 1.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDP 80
LRE+K +++L H N+VK+ E++
Sbjct: 56 LREIKIIRRLDHDNIVKVFEILGPS 80
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 135 bits (342), Expect = 1e-34
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 43/170 (25%)
Query: 358 LKKLSHANLVKLKEVIRENDT--------------------------------------L 379
+K L H N++KL + L
Sbjct: 54 MKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYL 113
Query: 380 YFVFEYMKENLYQLIRDRDKF---LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLL 436
+ EY+ + L+++++ + +P ++I +YQ+ + + F+H G HRD+KP+NLL
Sbjct: 114 NVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLL 173
Query: 437 C-MGTELVKIADFGLAREI-RSRPYTDYVSTRWYRAPEVLLHSTAYSAPI 484
+K+ DFG A+++ S P Y+ +R+YRAPE++L +T Y+ I
Sbjct: 174 VNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSI 223
Score = 59.7 bits (145), Expect = 2e-09
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 760 NMNFKFPQFRRVPFTSIIPHASP-DAIHLMESMLAYNPSKRPTAQQSLS 807
+FP + + I+P +P AI L+E +L Y P R ++++
Sbjct: 273 YTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA 321
Score = 31.6 bits (72), Expect = 1.2
Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDPPLHAYFQVGGPTTRVTSLKREAASEHISARSIYPT 115
RE+ +K L H N++KL + + P L + + +S+
Sbjct: 48 NRELDIMKVLDHVNIIKLVDYF-YTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVN 106
Query: 116 VKNTLTLNV 124
LNV
Sbjct: 107 PSQNKYLNV 115
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 131 bits (331), Expect = 1e-33
Identities = 37/135 (27%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 356 KSLKKLS-HANLVKLKEVIR--ENDTLYFVFEY-MKENLYQLIRDRDKFLPESIIRNMMY 411
K L+ L N++ L ++++ + T VFE+ + QL + L + IR MY
Sbjct: 82 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMY 137
Query: 412 QVLQGLAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAR-EIRSRPYTDYVSTRWYR 469
++L+ L + H G HRD+KP N++ +++ D+GLA + Y V++R+++
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 197
Query: 470 APEVLLHSTAYSAPI 484
PE+L+ Y +
Sbjct: 198 GPELLVDYQMYDYSL 212
Score = 52.7 bits (127), Expect = 3e-07
Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 756 TLASNMNFKFPQFRRVPFTSIIPH-----ASPDAIHLMESMLAYNPSKRPTAQQSLS 807
L N + R + + SP+A+ ++ +L Y+ R TA++++
Sbjct: 263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319
Score = 30.7 bits (70), Expect = 2.2
Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 56 LREVKSLKKLS-HANLVKLKEVILDPP 81
RE+K L+ L N++ L +++ DP
Sbjct: 78 KREIKILENLRGGPNIITLADIVKDPV 104
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 132 bits (334), Expect = 2e-33
Identities = 57/159 (35%), Positives = 84/159 (52%), Gaps = 30/159 (18%)
Query: 354 YR--KSLKKLS-HANLVKLKEVIR--ENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRN 408
+R L +LS H N+V L V+R + +Y VF+YM+ +L+ +IR L +
Sbjct: 56 FREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANI--LEPVHKQY 113
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY--------- 459
++YQ+++ + ++H G HRDMKP N+L VK+ADFGL+R +
Sbjct: 114 VVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSI 173
Query: 460 --------------TDYVSTRWYRAPEVLLHSTAYSAPI 484
TDYV+TRWYRAPE+LL ST Y+ I
Sbjct: 174 NENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGI 212
Score = 47.4 bits (113), Expect = 2e-05
Identities = 10/62 (16%), Positives = 27/62 (43%)
Query: 746 LHTLPLYTCYTLASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQS 805
+ +L ++ + + + + +A+ L++ +L +NP+KR +A +
Sbjct: 267 IESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDA 326
Query: 806 LS 807
L
Sbjct: 327 LK 328
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 129 bits (326), Expect = 2e-32
Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 13/140 (9%)
Query: 354 YR--KSLKKLSHANLVKLKEVIRENDT------LYFVFEYMKENLYQLIRDRDKFLPESI 405
YR +K ++H N++ L V + +Y V E M NL Q+I+ L
Sbjct: 72 YRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHER 128
Query: 406 IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-TDYVS 464
+ ++YQ+L G+ +H G HRD+KP N++ +KI DFGLAR + T YV
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 188
Query: 465 TRWYRAPEVLLHSTAYSAPI 484
TR+YRAPEV+L Y +
Sbjct: 189 TRYYRAPEVIL-GMGYKENV 207
Score = 48.5 bits (116), Expect = 6e-06
Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 12/62 (19%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHA------------SPDAIHLMESMLAYNPSKRPTAQQS 805
P++ F + P + A L+ ML + SKR + ++
Sbjct: 257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 316
Query: 806 LS 807
L
Sbjct: 317 LQ 318
Score = 32.4 bits (74), Expect = 0.82
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDPPLHAYFQ 87
RE+ +K ++H N++ L V FQ
Sbjct: 72 YRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 130 bits (329), Expect = 2e-32
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 32/162 (19%)
Query: 354 YR--KSLKKLSHANLVKLKEVIR-----ENDTLYFVFEYMKENLYQLIRDRDKFLPESII 406
R L +L +++L ++I + D LY V E +L +L + L E I
Sbjct: 73 LREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF-LTEEHI 131
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY------- 459
+ ++Y +L G F+H G HRD+KP N L VK+ DFGLAR I S
Sbjct: 132 KTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDL 191
Query: 460 -----------------TDYVSTRWYRAPEVLLHSTAYSAPI 484
T +V TRWYRAPE++L Y+ I
Sbjct: 192 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSI 233
Score = 63.6 bits (155), Expect = 1e-10
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
FP + + P S D I+L+ESML +NP+KR T Q+L
Sbjct: 312 VIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALD 361
Score = 32.0 bits (73), Expect = 1.0
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDPPLHAY 85
LRE+ L +L +++L ++I+ L +
Sbjct: 73 LREITILNRLKSDYIIRLYDLIIPDDLLKF 102
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 129 bits (327), Expect = 4e-32
Identities = 50/140 (35%), Positives = 72/140 (51%), Gaps = 13/140 (9%)
Query: 354 YR--KSLKKLSHANLVKLKEVIR------ENDTLYFVFEYMKENLYQLIRDRDKFLPESI 405
YR +K ++H N++ L V E +Y V E M NL Q+I+ L
Sbjct: 109 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHER 165
Query: 406 IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY-TDYVS 464
+ ++YQ+L G+ +H G HRD+KP N++ +KI DFGLAR + T YV
Sbjct: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 225
Query: 465 TRWYRAPEVLLHSTAYSAPI 484
TR+YRAPEV+L Y +
Sbjct: 226 TRYYRAPEVIL-GMGYKENV 244
Score = 49.8 bits (119), Expect = 3e-06
Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 12/62 (19%)
Query: 758 ASNMNFKFPQFRRVPFTSIIPHA------------SPDAIHLMESMLAYNPSKRPTAQQS 805
N P++ + F + P + + A L+ ML +P+KR + +
Sbjct: 294 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 353
Query: 806 LS 807
L
Sbjct: 354 LQ 355
Score = 32.5 bits (74), Expect = 0.78
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDPPLHAYFQ 87
RE+ +K ++H N++ L V FQ
Sbjct: 109 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 120 bits (304), Expect = 4e-30
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
L H N++ L E + L +FE++ + +++ I L E I + ++QV +
Sbjct: 55 LNIARHRNILHLHESFESMEELVMIFEFISGLD-IFERINTSAFELNEREIVSYVHQVCE 113
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTE--LVKIADFGLAREIR-SRPYTDYVSTRWYRAPE 472
L F+H H H D++PEN++ +KI +FG AR+++ + + Y APE
Sbjct: 114 ALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPE 173
Query: 473 VLLH 476
V H
Sbjct: 174 VHQH 177
Score = 41.1 bits (97), Expect = 0.001
Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 768 FRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVS-LSFVLLKKLN 823
F F I S +A+ ++ +L R TA ++L +K+++ +S +++ L
Sbjct: 222 FDEEAFKEI----SIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLK 277
Query: 824 RLEKYR 829
Y
Sbjct: 278 HRRYYH 283
Score = 34.1 bits (79), Expect = 0.20
Identities = 8/41 (19%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Query: 40 SIKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
+K+K ++ + +E+ L H N++ L E
Sbjct: 37 FVKVKGT----DQVLVKKEISILNIARHRNILHLHESFESM 73
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 117 bits (295), Expect = 3e-29
Identities = 48/133 (36%), Positives = 75/133 (56%), Gaps = 9/133 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+KL H N+V+L + I+E Y VF+ + E L++ I R+ + E+ + + Q+L+
Sbjct: 59 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE-LFEDIVAREFY-SEADASHCIQQILE 116
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
+A+ H +G HR++KPENLL VK+ADFGLA E+ S + + T Y +P
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSP 176
Query: 472 EVLLHSTAYSAPI 484
EVL YS P+
Sbjct: 177 EVLKKD-PYSKPV 188
Score = 38.3 bits (90), Expect = 0.009
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 44 KRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
+K + + RE + +KL H N+V+L + I +
Sbjct: 41 TKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE 77
Score = 37.9 bits (89), Expect = 0.011
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
+P+A L++SML NP KR TA Q+L
Sbjct: 232 DTVTPEAKSLIDSMLTVNPKKRITADQALK 261
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 116 bits (294), Expect = 4e-29
Identities = 28/124 (22%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
L+++ H N++ L ++ + + E + E L+ + +++ E + Q+L
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGE-LFDFLAEKESL-TEDEATQFLKQILD 119
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTE----LVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
G+ ++H H D+KPEN++ + +K+ DFG+A +I + + T + A
Sbjct: 120 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 179
Query: 471 PEVL 474
PE++
Sbjct: 180 PEIV 183
Score = 39.1 bits (92), Expect = 0.004
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 4/40 (10%)
Query: 768 FRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
F F++ S A + +L +P +R T QSL
Sbjct: 230 FDEEYFSNT----SELAKDFIRRLLVKDPKRRMTIAQSLE 265
Score = 35.6 bits (83), Expect = 0.053
Identities = 7/39 (17%), Positives = 17/39 (43%)
Query: 42 KMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
++ REV L+++ H N++ L ++ +
Sbjct: 42 RLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENK 80
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 116 bits (294), Expect = 5e-29
Identities = 47/123 (38%), Positives = 69/123 (56%), Gaps = 8/123 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
LKKL H N++KL E++ ++ + Y V E E L+ I R +F E ++ QV
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE-LFDEIIKRKRF-SEHDAARIIKQVFS 132
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
G+ +MH+H HRD+KPEN+L E +KI DFGL+ + + D + T +Y AP
Sbjct: 133 GITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
Query: 472 EVL 474
EVL
Sbjct: 193 EVL 195
Score = 39.5 bits (93), Expect = 0.003
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
S DA L+ ML ++PS R TA Q L
Sbjct: 247 RTISDDAKDLIRKMLTFHPSLRITATQCLE 276
Score = 38.8 bits (91), Expect = 0.006
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 44 KRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
K + + + LREV+ LKKL H N++KL E++ D
Sbjct: 57 KASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS 93
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 119 bits (299), Expect = 6e-29
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+ +L H L+ L + + + + E++ E L+ I D + E+ + N M Q +
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGE-LFDRIAAEDYKMSEAEVINYMRQACE 160
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTE--LVKIADFGLAREIR-SRPYTDYVSTRWYRAPE 472
GL MH H H D+KPEN++C + VKI DFGLA ++ +T + APE
Sbjct: 161 GLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPE 220
Query: 473 VL 474
++
Sbjct: 221 IV 222
Score = 46.6 bits (111), Expect = 2e-05
Identities = 24/137 (17%), Positives = 50/137 (36%), Gaps = 24/137 (17%)
Query: 768 FRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKKLNR 824
F F+S+ SP+A ++++L P KR T +L +K + S +R
Sbjct: 269 FDEDAFSSV----SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS------NLTSR 318
Query: 825 LEKYRLKNARETLQAKKSKVDSFNLQLQNLKYEIFHLKKEVVKCLQFKSKDEDIDLVDEE 884
+ R R+ ++ K + + + + + K + ++ + D
Sbjct: 319 IPSSRYNKIRQKIKEKYADWPAPQPAIGRIA----NFSS------LRKHRPQEYQIYDSY 368
Query: 885 TFFKD-APESISRPEVT 900
K+ P RP +
Sbjct: 369 FDRKEAVPRFKLRPSLI 385
Score = 35.1 bits (81), Expect = 0.10
Identities = 8/40 (20%), Positives = 15/40 (37%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
K Y ++ E+ + +L H L+ L + D
Sbjct: 81 AKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK 120
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 116 bits (292), Expect = 8e-29
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K L H N+++L E +N +Y V E E L++ + + F ES +M VL
Sbjct: 60 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGE-LFERVVHKRVF-RESDAARIMKDVLS 117
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
+A+ H+ HRD+KPEN L + +K+ DFGLA + + V T +Y +P
Sbjct: 118 AVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSP 177
Query: 472 EVL 474
+VL
Sbjct: 178 QVL 180
Score = 39.9 bits (94), Expect = 0.002
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
+ SP A L+ +L +P +R T+ Q+L
Sbjct: 232 LNVSPQAESLIRRLLTKSPKQRITSLQALE 261
Score = 35.3 bits (82), Expect = 0.067
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 57 REVKSLKKLSHANLVKLKEVILDP 80
+E++ +K L H N+++L E D
Sbjct: 55 QEIEIMKSLDHPNIIRLYETFEDN 78
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 116 bits (294), Expect = 9e-29
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
L+++ H N++ L +V + + E + E L+ + ++ E + + Q+L
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGE-LFDFLAQKESL-SEEEATSFIKQILD 126
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTE----LVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
G+ ++H H D+KPEN++ + +K+ DFGLA EI + + T + A
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 471 PEVL 474
PE++
Sbjct: 187 PEIV 190
Score = 42.6 bits (101), Expect = 4e-04
Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 8/77 (10%)
Query: 768 FRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS----IKREVSLSFVLLKKLN 823
F F+ S A + +L KR T Q++L + + V + +
Sbjct: 237 FDEEFFSHT----SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVV 292
Query: 824 RLEKYRLKNARETLQAK 840
LE +R + R +
Sbjct: 293 NLENFRKQYVRRRWKLS 309
Score = 35.7 bits (83), Expect = 0.058
Identities = 8/39 (20%), Positives = 17/39 (43%)
Query: 42 KMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
+ + REV L+++ H N++ L +V +
Sbjct: 49 QSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR 87
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 117 bits (295), Expect = 1e-28
Identities = 48/133 (36%), Positives = 75/133 (56%), Gaps = 9/133 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+KL H N+V+L + I+E Y VF+ + E L++ I R+ + E+ + + Q+L+
Sbjct: 82 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE-LFEDIVAREFY-SEADASHCIQQILE 139
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
+A+ H +G HR++KPENLL VK+ADFGLA E+ S + + T Y +P
Sbjct: 140 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSP 199
Query: 472 EVLLHSTAYSAPI 484
EVL YS P+
Sbjct: 200 EVLKKD-PYSKPV 211
Score = 43.5 bits (103), Expect = 2e-04
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS----IKREVSLSFVLLKK-LNRLEKYRLKN 832
+P+A L++SML NP KR TA Q+L RE S + + ++ L+K+ N
Sbjct: 255 DTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKF---N 311
Query: 833 ARETLQAKKSKVDSFNLQLQNLKYEIFHLKKE 864
AR L+ L NL + + K++
Sbjct: 312 ARRKLKGAILTTMIATRNLSNLGRNLLNKKEQ 343
Score = 37.7 bits (88), Expect = 0.016
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 44 KRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
+K + + RE + +KL H N+V+L + I +
Sbjct: 64 TKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE 100
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 115 bits (291), Expect = 2e-28
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 14/144 (9%)
Query: 346 RDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPE 403
+E+ V LKK+ H N+V L+++ Y V + + E L+ I +R + E
Sbjct: 54 ENEIAV------LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGE-LFDRILERGVY-TE 105
Query: 404 SIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIRSRPYT 460
++ QVL + ++H +G HRD+KPENLL + E + I DFGL++ ++ +
Sbjct: 106 KDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS 165
Query: 461 DYVSTRWYRAPEVLLHSTAYSAPI 484
T Y APEVL YS +
Sbjct: 166 TACGTPGYVAPEVLAQ-KPYSKAV 188
Score = 38.3 bits (90), Expect = 0.010
Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKK-LNRLEKYRLKN 832
S A + +L +P++R T +++LS I +L + +++K K+
Sbjct: 232 DDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTALHRDIYPSVSLQIQKNFAKS 290
Score = 36.0 bits (84), Expect = 0.048
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
+K +K ++ ++ E+ LKK+ H N+V L+++
Sbjct: 39 LKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYEST 78
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 116 bits (292), Expect = 2e-28
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LKKL+H ++K+K + + Y V E M+ L+ + + E+ + YQ+L
Sbjct: 69 LKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRL-KEATCKLYFYQMLLA 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIR-SRPYTDYVSTRWYRAPE 472
+ ++H +G HRD+KPEN+L E L+KI DFG ++ + + T Y APE
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 186
Query: 473 VLLHS 477
VL+
Sbjct: 187 VLVSV 191
Score = 39.2 bits (92), Expect = 0.005
Identities = 11/69 (15%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKKLNRLEKYRLKNAR 834
S A+ L++ +L +P R T +++L ++ E E L
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTALPQVL 304
Query: 835 ETLQAKKSK 843
+ +
Sbjct: 305 AQPSTSRKR 313
Score = 35.7 bits (83), Expect = 0.056
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 57 REVKSLKKLSHANLVKLKEVILDPPLH 83
E++ LKKL+H ++K+K +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDYY 90
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 118 bits (297), Expect = 2e-28
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
LKKL+H ++K+K + + Y V E M+ L+ + K L E+ + YQ+L
Sbjct: 194 LKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLA 251
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIR-SRPYTDYVSTRWYRAPE 472
+ ++H +G HRD+KPEN+L E L+KI DFG ++ + + T Y APE
Sbjct: 252 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 311
Query: 473 VL 474
VL
Sbjct: 312 VL 313
Score = 38.1 bits (89), Expect = 0.011
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSL 806
S A+ L++ +L +P R T +++L
Sbjct: 370 AEVSEKALDLVKKLLVVDPKARFTTEEAL 398
Score = 35.4 bits (82), Expect = 0.079
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 57 REVKSLKKLSHANLVKLKEVILDPPLH 83
E++ LKKL+H ++K+K +
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDYY 215
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 117 bits (294), Expect = 2e-28
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+ +L HANL++L + + + V EY+ E L+ I D L E M Q+ +
Sbjct: 140 MNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE-LFDRIIDESYNLTELDTILFMKQICE 198
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTE--LVKIADFGLAREIRSR-PYTDYVSTRWYRAPE 472
G+ MH+ H D+KPEN+LC+ + +KI DFGLAR + R T + APE
Sbjct: 199 GIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPE 258
Query: 473 VL 474
V+
Sbjct: 259 VV 260
Score = 41.6 bits (98), Expect = 0.001
Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 8/71 (11%)
Query: 768 FRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKKL-N 823
F I S +A + +L S R +A ++L + S + +K N
Sbjct: 307 LEDEEFQDI----SEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHSRLSAQKKKN 362
Query: 824 RLEKYRLKNAR 834
R + +
Sbjct: 363 RGSDAQDFVTK 373
Score = 33.5 bits (77), Expect = 0.31
Identities = 8/40 (20%), Positives = 18/40 (45%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
K+ + ++ E+ + +L HANL++L +
Sbjct: 119 AKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESK 158
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 115 bits (290), Expect = 2e-28
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 358 LKKLS-HANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVL 414
L+K+S H N+++LK+ N + VF+ MK E L+ + ++ E R +M +L
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGE-LFDYLTEKVTL-SEKETRKIMRALL 134
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS-RPYTDYVSTRWYRAPEV 473
+ + +H+ HRD+KPEN+L +K+ DFG + ++ + T Y APE+
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEI 194
Query: 474 L 474
+
Sbjct: 195 I 195
Score = 36.1 bits (84), Expect = 0.044
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
S L+ L P KR TA+++L+
Sbjct: 254 DDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283
Score = 31.5 bits (72), Expect = 1.3
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 52 EAMNLREVKSLKKLS-HANLVKLKEVILDP 80
L+EV L+K+S H N+++LK+
Sbjct: 67 REATLKEVDILRKVSGHPNIIQLKDTYETN 96
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 115 bits (291), Expect = 2e-28
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
LK++ H N++ L EV + + E + E L+ + +++ E + Q+L
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGE-LFDFLAEKESL-TEEEATEFLKQILN 125
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTE----LVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
G+ ++H H D+KPEN++ + +KI DFGLA +I + + T + A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 471 PEVL 474
PE++
Sbjct: 186 PEIV 189
Score = 43.0 bits (102), Expect = 3e-04
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 11/71 (15%)
Query: 768 FRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKK--- 821
F F++ S A + +L +P KR T Q SL IK + + + K
Sbjct: 236 FEDEYFSNT----SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAV 291
Query: 822 -LNRLEKYRLK 831
+ + +K+ +
Sbjct: 292 NMEKFKKFAAR 302
Score = 36.1 bits (84), Expect = 0.047
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 42 KMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
+ K REV LK++ H N++ L EV +
Sbjct: 48 RTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK 86
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 114 bits (288), Expect = 3e-28
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDR---DKFLPESIIRNMMYQ 412
LK L H N++K+ EV + +Y V E + E L + I K L E + +M Q
Sbjct: 74 LKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGE-LLERIVSAQARGKALSEGYVAELMKQ 132
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIRS-RPYTDYVSTRWY 468
++ LA+ H H+D+KPEN+L T +KI DFGLA +S T+ T Y
Sbjct: 133 MMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALY 192
Query: 469 RAPEVL 474
APEV
Sbjct: 193 MAPEVF 198
Score = 38.8 bits (91), Expect = 0.006
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 773 FTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
+ +P A+ L++ ML +P +RP+A Q L
Sbjct: 244 YAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278
Score = 38.0 bits (89), Expect = 0.011
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 35 NGPSISIKM--KRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
+G IK K + E + E++ LK L H N++K+ EV D
Sbjct: 46 SGLERVIKTINKDRSQVPMEQI-EAEIEVLKSLDHPNIIKIFEVFEDY 92
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 116 bits (292), Expect = 3e-28
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
L+++ H N++ L +V + + E + E L+ + ++ E + + Q+L
Sbjct: 69 LRQVLHPNIITLHDVYENRTDVVLILELVSGGE-LFDFLAQKESL-SEEEATSFIKQILD 126
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTE----LVKIADFGLAREIRSR-PYTDYVSTRWYRA 470
G+ ++H H D+KPEN++ + +K+ DFGLA EI + + T + A
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 471 PEVL 474
PE++
Sbjct: 187 PEIV 190
Score = 45.0 bits (107), Expect = 9e-05
Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 20/124 (16%)
Query: 768 FRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS----IKREVSLSFVLLKKLN 823
F F+ S A + +L KR T Q++L + + V + +
Sbjct: 237 FDEEFFSQT----SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVV 292
Query: 824 RLEKYRLKNARETLQAKKSKVDSFNLQLQNLKYEIFHLKKEVVKCLQFK-SKDEDIDLVD 882
LE ++ + R + S V N HL + ++K + + S+D D
Sbjct: 293 NLENFKKQYVRRRWKLSFSIVSLCN-----------HLTRSLMKKVHLRTSEDLRNCESD 341
Query: 883 EETF 886
E
Sbjct: 342 TEEN 345
Score = 35.0 bits (81), Expect = 0.10
Identities = 8/39 (20%), Positives = 17/39 (43%)
Query: 42 KMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
+ + REV L+++ H N++ L +V +
Sbjct: 49 QSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENR 87
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 117 bits (296), Expect = 4e-28
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 14/156 (8%)
Query: 338 ILSRHVSSRDEMVVCFYR--KSLKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQL 393
I ++ +S+RD + R + + L H N+V+L + I E Y +F+ + E L++
Sbjct: 44 INTKKLSARDHQKL--EREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGE-LFED 100
Query: 394 IRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGL 450
I R+ + E+ + + Q+L+ + H+ G HR++KPENLL VK+ADFGL
Sbjct: 101 IVAREYY-SEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGL 159
Query: 451 AREIRS--RPYTDYVSTRWYRAPEVLLHSTAYSAPI 484
A E+ + + + T Y +PEVL Y P+
Sbjct: 160 AIEVEGEQQAWFGFAGTPGYLSPEVLRKD-PYGKPV 194
Score = 45.0 bits (107), Expect = 1e-04
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 22/135 (16%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS----IKREVSLSFVLLKK-LNRLEKYRLKN 832
+P+A L+ ML NPSKR TA ++L R S + ++ ++ L+K+ N
Sbjct: 238 DTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKF---N 294
Query: 833 ARETLQAKKSKVDSFNLQLQNLKYEIFHLKKEVVKCLQFKSKDEDIDLVDEETFFKDAPE 892
AR L K + + L +N + K + + + D E++ K
Sbjct: 295 ARRKL---KGAILTVMLATRNFSVRKQEIIKV-----TEQLIEAISN-GDFESYTK---- 341
Query: 893 SISRPEVTKEDPHQL 907
+ P +T +P L
Sbjct: 342 -MCDPGMTAFEPEAL 355
Score = 38.1 bits (89), Expect = 0.015
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
I +K + + RE + + L H N+V+L + I +
Sbjct: 43 IINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEE 82
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 114 bits (288), Expect = 5e-28
Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 355 RKSLKKL-SHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQV 413
S +K+ H V+L++ E LY E +L Q LPE+ + +
Sbjct: 107 VGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDT 166
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD-YVSTRWYRAPE 472
L LA +H G H D+KP N+ K+ DFGL E+ + + Y APE
Sbjct: 167 LLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPE 226
Query: 473 VL 474
+L
Sbjct: 227 LL 228
Score = 36.9 bits (86), Expect = 0.023
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 776 IIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
S + ++ ML +P R TA+ L+
Sbjct: 273 FTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 115 bits (289), Expect = 9e-28
Identities = 31/121 (25%), Positives = 66/121 (54%), Gaps = 6/121 (4%)
Query: 358 LKKLS-HANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVL 414
L++++ H +++ L + + ++ VF+ M+ E L+ + ++ E R++M +L
Sbjct: 153 LRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGE-LFDYLTEKVAL-SEKETRSIMRSLL 210
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR-SRPYTDYVSTRWYRAPEV 473
+ ++F+H + HRD+KPEN+L ++++DFG + + + T Y APE+
Sbjct: 211 EAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEI 270
Query: 474 L 474
L
Sbjct: 271 L 271
Score = 35.5 bits (82), Expect = 0.085
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
S L+ +L +P R TA+Q+L
Sbjct: 330 DDRSSTVKDLISRLLQVDPEARLTAEQALQ 359
Score = 32.4 bits (74), Expect = 0.70
Identities = 5/41 (12%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLS-HANLVKLKEVILDP 80
++ + RE L++++ H +++ L +
Sbjct: 132 ERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS 172
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 113 bits (286), Expect = 1e-27
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 7/124 (5%)
Query: 358 LKKLSHA-NLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVL 414
L+ ++ L EV + + EY E + + + + E+ + ++ Q+L
Sbjct: 82 LELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQIL 141
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIR-SRPYTDYVSTRWYRA 470
+G+ ++H++ H D+KP+N+L +KI DFG++R+I + + + T Y A
Sbjct: 142 EGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLA 201
Query: 471 PEVL 474
PE+L
Sbjct: 202 PEIL 205
Score = 42.2 bits (100), Expect = 6e-04
Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 768 FRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKKLNR 824
+ F+S+ S A ++S+L NP KRPTA+ LS +++ + ++ +
Sbjct: 252 YSEETFSSV----SQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSS 307
Query: 825 LEKYRLKNARETLQAK 840
+ + + R +
Sbjct: 308 SSQTQDHSVRSSEDKT 323
Score = 32.6 bits (75), Expect = 0.59
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 40 SIKMKRKYYSWEEAMNLREVKSLKKLSHA-NLVKLKEVILDP 80
+K KR+ A L E+ L+ ++ L EV +
Sbjct: 61 FLK-KRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENT 101
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 116 bits (292), Expect = 2e-27
Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK+L H N++KL E + Y V E L+ I R +F E ++ QVL G
Sbjct: 80 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF-SEVDAARIIRQVLSG 138
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIR-SRPYTDYVSTRWYRAPE 472
+ +MH++ HRD+KPENLL ++I DFGL+ S+ D + T +Y APE
Sbjct: 139 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 198
Query: 473 VL 474
VL
Sbjct: 199 VL 200
Score = 50.5 bits (121), Expect = 2e-06
Identities = 28/166 (16%), Positives = 48/166 (28%), Gaps = 24/166 (14%)
Query: 766 PQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKKL 822
F + + S A L+ ML Y PS R +A+ +L I+ +
Sbjct: 244 YTFELPQWKKV----SESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPS 299
Query: 823 NRLEKYRLK--NARETLQAKKSKVDSFNLQLQNLKYEIFHLKKEVVKCLQFKSKDEDID- 879
++ + L L Q+ E L F D++ D
Sbjct: 300 LDNAILNIRQFQGTQKLAQAALLYMGSKLTSQD---ETKELTA------IFHKMDKNGDG 350
Query: 880 -LVDEETFFKDAPESISRPEVTKEDPHQLKLARLEWELKQRKELAD 924
L E + + + R + E E+ Q + D
Sbjct: 351 QLDRAE--LIEGYKELMRMKGQDASMLDASAV--EHEVDQVLDAVD 392
Score = 36.6 bits (85), Expect = 0.043
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 44 KRKYYSWEEAMNL-REVKSLKKLSHANLVKLKEVILDP 80
KR+ + +L REV+ LK+L H N++KL E D
Sbjct: 61 KRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK 98
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 116 bits (292), Expect = 2e-27
Identities = 47/123 (38%), Positives = 69/123 (56%), Gaps = 8/123 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
LKKL H N++KL E++ ++ + Y V E E L+ I R +F E ++ QV
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE-LFDEIIKRKRF-SEHDAARIIKQVFS 132
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
G+ +MH+H HRD+KPEN+L E +KI DFGL+ + + D + T +Y AP
Sbjct: 133 GITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
Query: 472 EVL 474
EVL
Sbjct: 193 EVL 195
Score = 48.1 bits (115), Expect = 1e-05
Identities = 32/169 (18%), Positives = 61/169 (36%), Gaps = 26/169 (15%)
Query: 766 PQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKK- 821
F + +I S DA L+ ML ++PS R TA Q L I++ S + +
Sbjct: 239 YAFDLPQWRTI----SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLP 294
Query: 822 -----LNRLEKYRLKNARETLQAKKSKVDSFNLQLQNLKYEIFHLKKEVVKCLQFKSKDE 876
+ + ++ A + L + L + E L + F+ D
Sbjct: 295 SLESAMTNIRQF---QAEKKLAQAALLYMASKLTTLD---ETKQLTE------IFRKLDT 342
Query: 877 DID-LVDEETFFKDAPESISRPEVTKEDPHQLKLARLEWELKQRKELAD 924
+ D ++D + + E + V Q + + +E ++ L D
Sbjct: 343 NNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLD 391
Score = 38.1 bits (89), Expect = 0.013
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 44 KRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
K + + + LREV+ LKKL H N++KL E++ D
Sbjct: 57 KASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS 93
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 115 bits (289), Expect = 2e-27
Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 11/128 (8%)
Query: 358 LKKLS-HANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
L++ H N+++ ++ Y E L + + +D ++ Q G
Sbjct: 71 LRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSG 130
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL-----VKIADFGLAREIRSRPY-----TDYVSTR 466
LA +H HRD+KP N+L I+DFGL +++ + + T
Sbjct: 131 LAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 467 WYRAPEVL 474
+ APE+L
Sbjct: 191 GWIAPEML 198
Score = 48.2 bits (115), Expect = 8e-06
Identities = 23/97 (23%), Positives = 35/97 (36%), Gaps = 6/97 (6%)
Query: 772 PFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS----IKREVSLSFVLLKKLNRLEK 827
H A L+E M+A +P KRP+A+ L E L F +R+EK
Sbjct: 248 DCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQF-FQDVSDRIEK 306
Query: 828 YRLKNA-RETLQAKKSKVDSFNLQLQNLKYEIFHLKK 863
L + L+ V + + L+K
Sbjct: 307 ESLDGPIVKQLERGGRAVVKMDWRENITVPLQTDLRK 343
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 116 bits (292), Expect = 2e-27
Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK L H N++KL + + Y V E K L+ I R KF E ++ QVL G
Sbjct: 90 LKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKF-NEVDAAVIIKQVLSG 148
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIR-SRPYTDYVSTRWYRAPE 472
+ ++H+H HRD+KPENLL E L+KI DFGL+ + + + T +Y APE
Sbjct: 149 VTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPE 208
Query: 473 VL 474
VL
Sbjct: 209 VL 210
Score = 48.9 bits (117), Expect = 6e-06
Identities = 29/152 (19%), Positives = 51/152 (33%), Gaps = 38/152 (25%)
Query: 743 YILLHTLPLYTCYT--------LASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAY 794
+ILL P + T F P+++ V S A L++ ML +
Sbjct: 228 FILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNV---------SEGAKDLIKQMLQF 278
Query: 795 NPSKRPTAQQSLS--------IKREVSLSFVLLKK-LNRLEKYRLKNARETLQAKKSKVD 845
+ +R +AQQ+L K+E + L + + K+ + L
Sbjct: 279 DSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKF---QNSQKLAQAALLYM 335
Query: 846 SFNLQLQNLKYEIFHLKKEVVKCLQFKSKDED 877
+ L Q E L F+ D++
Sbjct: 336 ASKLTSQE---ETKELTD------IFRHIDKN 358
Score = 38.5 bits (90), Expect = 0.010
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 44 KRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
K + + L EV LK L H N++KL + D
Sbjct: 72 KTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDK 108
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 113 bits (284), Expect = 3e-27
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
L+ H N++ LK+V + +Y V E MK E L I + F E +++ + +
Sbjct: 70 LRYGQHPNIITLKDVYDDGKYVYVVTELMKGGE-LLDKILRQKFF-SEREASAVLFTITK 127
Query: 416 GLAFMHRHGFFHRDMKPENLLCM----GTELVKIADFGLAREIRS--RPYTDYVSTRWYR 469
+ ++H G HRD+KP N+L + E ++I DFG A+++R+ T +
Sbjct: 128 TVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFV 187
Query: 470 APEVLLHSTAYSAPI 484
APEVL Y A
Sbjct: 188 APEVLER-QGYDAAC 201
Score = 38.4 bits (90), Expect = 0.008
Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 5/76 (6%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKKLNRLEKYRLKNAR 834
S A L+ ML +P +R TA L I L L + + +K A
Sbjct: 248 NSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHL--VKGAM 305
Query: 835 ETLQAKKSKVDSFNLQ 850
+ ++ S L+
Sbjct: 306 AATYSALNRNQSPVLE 321
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 112 bits (282), Expect = 3e-27
Identities = 26/123 (21%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 358 LKKLSHANL--VKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
L KL + ++L + + +Y V E +L ++ + ++ +L+
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI-DPWERKSYWKNMLE 138
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTR----WYRAP 471
+ +H+HG H D+KP N L + ++K+ DFG+A +++ + ++ Y P
Sbjct: 139 AVHTIHQHGIVHSDLKPANFL-IVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 197
Query: 472 EVL 474
E +
Sbjct: 198 EAI 200
Score = 40.4 bits (95), Expect = 0.002
Identities = 5/30 (16%), Positives = 13/30 (43%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
D +++ L +P +R + + L+
Sbjct: 263 DIPEKDLQDVLKCCLKRDPKQRISIPELLA 292
Score = 30.0 bits (68), Expect = 3.3
Identities = 7/44 (15%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 41 IKMKRKYYSWEEAMN--LREVKSLKKLSHANL--VKLKEVILDP 80
IK + + ++ E+ L KL + ++L + +
Sbjct: 57 IKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD 100
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 112 bits (282), Expect = 3e-27
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 358 LKKLSHANLVKLKEVI--RENDTLYFVFEYMKE-NLYQLIRDRDK--FLPESIIRNMMYQ 412
LKKL+H N+VKL + + E+ +LY ++ + LPES ++
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRD 120
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTE----LVKIADFGLAREIR-SRPYTDYVSTRW 467
V+ G+ + +G HR++KP N++ + E + K+ DFG ARE+ + T
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEE 180
Query: 468 YRAPEVL 474
Y P++
Sbjct: 181 YLHPDMY 187
Score = 37.8 bits (88), Expect = 0.014
Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 41 IKM--KRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDPPLHAYFQV 88
IK+ + + +RE + LKKL+H N+VKL + + +
Sbjct: 39 IKVFNNISFLRPVDVQ-MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87
Score = 31.3 bits (71), Expect = 1.5
Identities = 8/98 (8%), Positives = 24/98 (24%), Gaps = 10/98 (10%)
Query: 711 YILLH-TLPLYTYHVPPIQTTCLLAGTERLKSSYILLHTLPLYTCYTLASNMNFKFPQFR 769
Y +LP + P + ++ + + + + P
Sbjct: 214 YHAATGSLPFRPFEGPRRNKEVM----YKIITGKPSGAISGVQKAENGPIDWSGDMPVSC 269
Query: 770 RVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
+ ++ ++L + K Q +
Sbjct: 270 SLS-----RGLQVLLTPVLANILEADQEKCWGFDQFFA 302
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 112 bits (283), Expect = 4e-27
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 12/137 (8%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDK---FLPESIIRNMMYQ 412
L H ++V+L E + LY VFE+M + L I R E++ + M Q
Sbjct: 80 CHMLKHPHIVELLETYSSDGMLYMVFEFMDGAD-LCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIR--SRPYTDYVSTRW 467
+L+ L + H + HRD+KP +L E VK+ FG+A ++ V T
Sbjct: 139 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 198
Query: 468 YRAPEVLLHSTAYSAPI 484
+ APEV+ Y P+
Sbjct: 199 FMAPEVVKRE-PYGKPV 214
Score = 40.7 bits (96), Expect = 0.002
Identities = 22/105 (20%), Positives = 39/105 (37%), Gaps = 18/105 (17%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS----IKREVSLSFVLLKK-LNRLEKYRLKN 832
H S A L+ ML +P++R T ++L+ +R+ + L + + +L K+ N
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKF---N 313
Query: 833 ARETLQAKKSKVDSFNLQLQNLKYEIFHLKKEVVKCLQFKSKDED 877
AR L+ S + +E ED
Sbjct: 314 ARRKLKGAVLAAVSSHK----FNSFYGDPPEE------LPDFSED 348
Score = 35.4 bits (82), Expect = 0.072
Identities = 9/39 (23%), Positives = 13/39 (33%), Gaps = 1/39 (2%)
Query: 42 KMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
K E + RE L H ++V+L E
Sbjct: 61 KFTSSPGLSTEDL-KREASICHMLKHPHIVELLETYSSD 98
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 116 bits (291), Expect = 5e-27
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+ L H LV L + +++ + ++E+M E L++ + D + E M QV +
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE-LFEKVADEHNKMSEDEAVEYMRQVCK 266
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTE--LVKIADFGLAREIR-SRPYTDYVSTRWYRAPE 472
GL MH + + H D+KPEN++ +K+ DFGL + + T + APE
Sbjct: 267 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE 326
Query: 473 VL 474
V
Sbjct: 327 VA 328
Score = 44.4 bits (105), Expect = 2e-04
Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 12/91 (13%)
Query: 768 FRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKKLNR 824
F+ I S D + +L +P+ R T Q+L + + + ++
Sbjct: 375 MDDSAFSGI----SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPG-----RDSQ 425
Query: 825 LEKYRLKNARETLQAKKSKVDSFNLQLQNLK 855
+ R R++++ K L +
Sbjct: 426 IPSSRYTKIRDSIKTKYDAWPEPLPPLGRIS 456
Score = 34.4 bits (79), Expect = 0.20
Identities = 8/40 (20%), Positives = 17/40 (42%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
K + ++ +E++++ L H LV L + D
Sbjct: 187 AKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD 226
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 111 bits (280), Expect = 6e-27
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 358 LKKLS-HANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVL 414
LK H N+VKL EV + + V E + E L++ I+ + F E+ +M +++
Sbjct: 59 LKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE-LFERIKKKKHF-SETEASYIMRKLV 116
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIR--SRPYTDYVSTRWYR 469
++ MH G HRD+KPENLL +KI DFG AR ++P T Y
Sbjct: 117 SAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYA 176
Query: 470 APEVLLHSTAYSAPI 484
APE+L Y
Sbjct: 177 APELLNQ-NGYDESC 190
Score = 37.3 bits (87), Expect = 0.021
Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 11/88 (12%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKKLNRLEKYRLKNAR 834
+ S +A L++ +L +P+KR ++ LS L + L +
Sbjct: 241 KNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILG----SSGA 296
Query: 835 ETLQAKKSKVDSFNLQLQNLKYEIFHLK 862
K+ +FN K E F L+
Sbjct: 297 AVHTCVKATFHAFN----KYKREGFCLQ 320
Score = 29.2 bits (66), Expect = 6.0
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Query: 44 KRKYYSWEEAMNLREVKSLKKLS-HANLVKLKEVILDP 80
KR EA +E+ +LK H N+VKL EV D
Sbjct: 46 KRM-----EANTQKEITALKLCEGHPNIVKLHEVFHDQ 78
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 110 bits (278), Expect = 7e-27
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
L+K H N++ L V ++ + +LY + + + ++ Q +G
Sbjct: 74 LRKTRHVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 132
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTR--WYR--APE 472
+ ++H HRD+K N+ VKI DFGLA E + APE
Sbjct: 133 MDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
Query: 473 VLLH 476
V+
Sbjct: 193 VIRM 196
Score = 35.0 bits (81), Expect = 0.094
Identities = 10/44 (22%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Query: 41 IKMKRKYYSWEEAMN--LREVKSLKKLSHANLVKLKEVILDPPL 82
+KM + + EV L+K H N++ P L
Sbjct: 51 VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL 94
Score = 29.6 bits (67), Expect = 5.3
Identities = 5/35 (14%), Positives = 10/35 (28%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPT 801
+ + + LM L +RP+
Sbjct: 241 GSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPS 275
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 110 bits (277), Expect = 1e-26
Identities = 40/153 (26%), Positives = 58/153 (37%), Gaps = 30/153 (19%)
Query: 358 LKKLSHANLVKLKEVIREND-------------TLYFVFEYM-KENLYQLIRDRDKFLPE 403
L L+H +V+ E TL+ EY LY LI +
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR 115
Query: 404 SIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPY---- 459
+ Q+L+ L+++H G HRD+KP N+ + VKI DFGLA+ +
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 460 ------------TDYVSTRWYRAPEVLLHSTAY 480
T + T Y A EVL + Y
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY 208
Score = 40.0 bits (94), Expect = 0.002
Identities = 13/89 (14%), Positives = 32/89 (35%), Gaps = 13/89 (14%)
Query: 743 YILLHTLPLYTCYTLASNMNFKFPQFRRVPFT---SIIPHASPDAIHLMESMLAYNPSKR 799
+ +++ P T + R V + ++ ++ ++P+KR
Sbjct: 222 FEMIY--PFST----GMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKR 275
Query: 800 PTAQQSLS---IKREVSLSFVLLKKLNRL 825
P A+ L+ + + V+ + L L
Sbjct: 276 PGARTLLNSGWLPVKHQ-DEVIKEALKSL 303
Score = 33.1 bits (76), Expect = 0.35
Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILD 79
I+ + + + L EV L L+H +V+ L+
Sbjct: 39 IRHTEE----KLSTILSEVMLLASLNHQYVVRYYAAWLE 73
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 114 bits (286), Expect = 1e-26
Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK L H N++KL +V + Y V E+ + L++ I +R KF E N+M Q+L G
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF-DECDAANIMKQILSG 158
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIR-SRPYTDYVSTRWYRAPE 472
+ ++H+H HRD+KPEN+L +KI DFGL+ D + T +Y APE
Sbjct: 159 ICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPE 218
Query: 473 VL 474
VL
Sbjct: 219 VL 220
Score = 50.1 bits (120), Expect = 2e-06
Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 18/117 (15%)
Query: 766 PQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKKL 822
F + +I S +A L++ ML Y+ +KR TA+++L+ IK+ + +K
Sbjct: 264 YYFDFNDWKNI----SDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKT 319
Query: 823 NRLEKYRLK--NARETLQAKKSKVDSFNLQLQNLKYEIFHLKKEVVKCLQFKSKDED 877
++ + L L E L FK D++
Sbjct: 320 LCGALSNMRKFEGSQKLAQAAILFIGSKL---TTLEERKELTD------IFKKLDKN 367
Score = 34.3 bits (79), Expect = 0.18
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 51 EEAMNLREVKSLKKLSHANLVKLKEVILDP 80
E+ LK L H N++KL +V D
Sbjct: 89 FHEEIYNEISLLKSLDHPNIIKLFDVFEDK 118
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 110 bits (276), Expect = 2e-26
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 17/136 (12%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
++ L H N++K V+ ++ L F+ EY+K L +I+ D P S + + G
Sbjct: 61 MRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASG 120
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYR------- 469
+A++H HRD+ N L + V +ADFGLAR + +
Sbjct: 121 MAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRY 180
Query: 470 ---------APEVLLH 476
APE++
Sbjct: 181 TVVGNPYWMAPEMING 196
Score = 35.0 bits (81), Expect = 0.099
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Query: 35 NGPSISIKMKRKYYSWEEAMN--LREVKSLKKLSHANLVKLKEVILDPP 81
+ MK EE L+EVK ++ L H N++K V+
Sbjct: 32 RETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK 80
Score = 29.2 bits (66), Expect = 7.3
Identities = 10/50 (20%), Positives = 15/50 (30%), Gaps = 7/50 (14%)
Query: 755 YTLASNMNF--KFPQFRRVPFTSIIPHASPDAIH-LMESMLAYNPSKRPT 801
L M+F F P P + + +P KRP+
Sbjct: 224 DYLPRTMDFGLNVRGFLDRY----CPPNCPPSFFPITVRCCDLDPEKRPS 269
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 110 bits (277), Expect = 3e-26
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 9/133 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
L +LSH N++KLKE+ + V E + E L+ I ++ + E + + Q+L+
Sbjct: 102 LLRLSHPNIIKLKEIFETPTEISLVLELVTGGE-LFDRIVEKGYY-SERDAADAVKQILE 159
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIR-SRPYTDYVSTRWYRAP 471
+A++H +G HRD+KPENLL +KIADFGL++ + T Y AP
Sbjct: 160 AVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAP 219
Query: 472 EVLLHSTAYSAPI 484
E+ L AY +
Sbjct: 220 EI-LRGCAYGPEV 231
Score = 41.5 bits (98), Expect = 0.001
Identities = 10/58 (17%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKKLNRLEKYRLKN 832
S +A L+ ++ +P KR T Q+L + + + + +L+++ +
Sbjct: 276 DEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANFVHMDTAQKKLQEFNARR 333
Score = 34.2 bits (79), Expect = 0.16
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 44 KRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
K ++ + E+ L +LSH N++KLKE+ P
Sbjct: 88 KTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETP 120
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 109 bits (275), Expect = 3e-26
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 358 LKKLSHA--NLVKLKEVIRENDTLYFVFEYMKEN--LYQLIRDRDKFLPESIIRNMMYQV 413
LKK+S +++L + D+ + E + L+ I +R L E + R+ +QV
Sbjct: 100 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQV 158
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTEL-VKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
L+ + H G HRD+K EN+L +K+ DFG ++ YTD+ TR Y PE
Sbjct: 159 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 218
Query: 473 VLLHSTAYSAP 483
+ + Y
Sbjct: 219 WIRYH-RYHGR 228
Score = 36.9 bits (86), Expect = 0.027
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQ 804
S + HL+ LA PS RPT ++
Sbjct: 264 QRVSSECQHLIRWCLALRPSDRPTFEE 290
Score = 30.8 bits (70), Expect = 2.1
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 8/53 (15%)
Query: 33 VPNGPSISIKM--KRKYYSWEEAMNL----REVKSLKKLSHA--NLVKLKEVI 77
V + ++IK K + W E N EV LKK+S +++L +
Sbjct: 65 VSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 117
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 110 bits (276), Expect = 6e-26
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 358 LKKLSHANLVKLKEVI--RENDTLYFVFEYMKE-NLYQLI--RDRDKFLPESIIRNMMYQ 412
LKKL+H N+VKL + + E+ +LY ++ LPES ++
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRD 120
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTE----LVKIADFGLAREIR-SRPYTDYVSTRW 467
V+ G+ + +G HR++KP N++ + E + K+ DFG ARE+ + T
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEE 180
Query: 468 YRAPEVL 474
Y P++
Sbjct: 181 YLHPDMY 187
Score = 37.1 bits (86), Expect = 0.027
Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 41 IKM--KRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDPPLHAYFQV 88
IK+ + + +RE + LKKL+H N+VKL + + +
Sbjct: 39 IKVFNNISFLRPVDVQ-MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87
Score = 29.0 bits (65), Expect = 7.3
Identities = 20/183 (10%), Positives = 50/183 (27%), Gaps = 18/183 (9%)
Query: 711 YILLH-TLPLYTYHVPPIQTTCLLAGTERLKSSYILLHTLPLYTCYTLASNMNFKFPQFR 769
Y +LP + P + ++ + + + + P
Sbjct: 214 YHAATGSLPFRPFEGPRRNKEVM----YKIITGKPSGAISGVQKAENGPIDWSGDMPVSC 269
Query: 770 RVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS-IKREVSLSFVLLKKLNRLEKY 828
+ ++ ++L + K Q + + + + L ++ +
Sbjct: 270 SLS-----RGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRMVIHVFSLQQMTAH 324
Query: 829 RL----KNARETLQAKKSKVDSFNLQLQNLKYEIFHLKKE---VVKCLQFKSKDEDIDLV 881
++ N K Q L YE L E + + +++ I +V
Sbjct: 325 KIYIHSYNTATIFHELVYKQTKIISSNQELIYEGRRLVLEPGRLAQHFPKTTEENPIFVV 384
Query: 882 DEE 884
E
Sbjct: 385 SRE 387
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 108 bits (272), Expect = 9e-26
Identities = 27/123 (21%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 358 LKKLSHANL--VKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
L KL + ++L + + +Y V E +L ++ + K + ++ +L+
Sbjct: 61 LNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK-KSIDPWERKSYWKNMLE 119
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTR----WYRAP 471
+ +H+HG H D+KP N L + ++K+ DFG+A +++ + ++ Y P
Sbjct: 120 AVHTIHQHGIVHSDLKPANFL-IVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 178
Query: 472 EVL 474
E +
Sbjct: 179 EAI 181
Score = 43.5 bits (103), Expect = 2e-04
Identities = 10/79 (12%), Positives = 23/79 (29%), Gaps = 3/79 (3%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKKLNRLEKYRLKNAR 834
D +++ L +P +R + + L+ ++ + + K KY L
Sbjct: 244 DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLV 303
Query: 835 ETLQAKKSKVDSFNLQLQN 853
+ L
Sbjct: 304 GLNSPNSILKAAKTLYEHY 322
Score = 29.3 bits (66), Expect = 6.6
Identities = 7/44 (15%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 41 IKMKRKYYSWEEAMN--LREVKSLKKLSHANL--VKLKEVILDP 80
IK + + ++ E+ L KL + ++L + +
Sbjct: 38 IKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD 81
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 107 bits (269), Expect = 1e-25
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLI---RDRDKFLPESIIRNMMYQV 413
LK+L+H N++K E++ L V E +L ++I + + + +PE + Q+
Sbjct: 86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS---RPYTDYVSTRWYRA 470
L MH HRD+KP N+ T +VK+ D GL R S ++ V T +Y +
Sbjct: 146 CSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS-LVGTPYYMS 204
Query: 471 PEVL 474
PE +
Sbjct: 205 PERI 208
Score = 33.4 bits (77), Expect = 0.32
Identities = 7/35 (20%), Positives = 14/35 (40%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLSIKREV 812
H S + L+ + +P KRP + + +
Sbjct: 261 DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRM 295
Score = 28.8 bits (65), Expect = 7.8
Identities = 8/39 (20%), Positives = 21/39 (53%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILD 79
+++ + A ++E+ LK+L+H N++K ++
Sbjct: 65 VQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE 103
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 107 bits (270), Expect = 2e-25
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 358 LKKLS-HANLVKLKEV----IRENDTLYFVFEYMK--ENLYQLIRDR-DKFLPESIIRNM 409
+ S ++V + +V L + E M+ E L+ I++R D+ E +
Sbjct: 75 HWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGE-LFSRIQERGDQAFTEREAAEI 133
Query: 410 MYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIRSRPYTDYVSTR 466
M + + F+H H HRD+KPENLL E ++K+ DFG A+E T
Sbjct: 134 MRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTP 193
Query: 467 WYRAPEVL 474
+Y APEVL
Sbjct: 194 YYVAPEVL 201
Score = 39.2 bits (92), Expect = 0.004
Identities = 13/70 (18%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKKLNRLEKYRLKNAR 834
S DA L+ +L +P++R T Q ++ I + + + L L+ K+
Sbjct: 258 SEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQ--EDKDHW 315
Query: 835 ETLQAKKSKV 844
+ ++ + +
Sbjct: 316 DEVKEEMTSA 325
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 107 bits (270), Expect = 2e-25
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDK-FLPESIIRNMMYQVLQ 415
L + H N+V+ +E EN +LY V +Y + +L++ I + E I + Q+
Sbjct: 77 LANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICL 136
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTR----WYRAP 471
L +H HRD+K +N+ V++ DFG+AR + S + +Y +P
Sbjct: 137 ALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST--VELARACIGTPYYLSP 194
Query: 472 EVL 474
E+
Sbjct: 195 EIC 197
Score = 35.8 bits (83), Expect = 0.054
Identities = 16/62 (25%), Positives = 22/62 (35%), Gaps = 5/62 (8%)
Query: 751 LYTCYTL-----ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQS 805
LY TL A +M + F + H S D L+ + NP RP+
Sbjct: 215 LYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSI 274
Query: 806 LS 807
L
Sbjct: 275 LE 276
Score = 29.7 bits (67), Expect = 5.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 56 LREVKSLKKLSHANLVKLKEVILD 79
REV L + H N+V+ +E +
Sbjct: 71 RREVAVLANMKHPNIVQYRESFEE 94
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 107 bits (268), Expect = 2e-25
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 5/128 (3%)
Query: 359 KKLSHANLVKLKEVIRENDTLYFVFEYMKEN--LYQLIRDRDKFLPESIIRNMMYQVLQG 416
H +++L + + V E L+ I ++ L E R QV+
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP-LGEGPSRCFFGQVVAA 151
Query: 417 LAFMHRHGFFHRDMKPENLLC-MGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLL 475
+ H G HRD+K EN+L + K+ DFG + PYTD+ TR Y PE +
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWIS 211
Query: 476 HSTAYSAP 483
Y A
Sbjct: 212 RH-QYHAL 218
Score = 36.9 bits (86), Expect = 0.027
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQ 804
H SPD L+ LA PS RP+ ++
Sbjct: 254 AHVSPDCCALIRRCLAPKPSSRPSLEE 280
Score = 29.2 bits (66), Expect = 6.7
Identities = 9/58 (15%), Positives = 22/58 (37%), Gaps = 10/58 (17%)
Query: 33 VPNGPSISIKM--KRKYYSWEEAMNL----REVKSLKKLS----HANLVKLKEVILDP 80
+ + ++IK+ + + W + EV L K+ H +++L +
Sbjct: 53 LTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ 110
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 108 bits (272), Expect = 2e-25
Identities = 26/123 (21%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 358 LKKLSHANL--VKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
L KL + ++L + + +Y V E +L ++ + ++ +L+
Sbjct: 108 LNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI-DPWERKSYWKNMLE 166
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTR----WYRAP 471
+ +H+HG H D+KP N L + ++K+ DFG+A +++ + ++ Y P
Sbjct: 167 AVHTIHQHGIVHSDLKPANFL-IVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPP 225
Query: 472 EVL 474
E +
Sbjct: 226 EAI 228
Score = 43.6 bits (103), Expect = 2e-04
Identities = 10/79 (12%), Positives = 23/79 (29%), Gaps = 3/79 (3%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKKLNRLEKYRLKNAR 834
D +++ L +P +R + + L+ ++ + + K KY L
Sbjct: 291 DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLV 350
Query: 835 ETLQAKKSKVDSFNLQLQN 853
+ L
Sbjct: 351 GLNSPNSILKAAKTLYEHY 369
Score = 29.0 bits (65), Expect = 8.8
Identities = 7/44 (15%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 41 IKMKRKYYSWEEAMN--LREVKSLKKLSHANL--VKLKEVILDP 80
IK + + ++ E+ L KL + ++L + +
Sbjct: 85 IKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD 128
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 105 bits (265), Expect = 2e-25
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
L H N++ L+ V + L V E+ + L +++ + +P I+ N Q+ +G
Sbjct: 60 FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR--IPPDILVNWAVQIARG 117
Query: 417 LAFMHRHGFF---HRDMKPENLL--------CMGTELVKIADFGLAREIRSRPYTDYVST 465
+ ++H HRD+K N+L + +++KI DFGLARE
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGA 177
Query: 466 RWYRAPEVLLHSTAYS 481
+ APEV+ S +S
Sbjct: 178 YAWMAPEVIRASM-FS 192
Score = 34.2 bits (79), Expect = 0.17
Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 35 NGPSISIKMKRKYYSWEEAMNL----REVKSLKKLSHANLVKLKEVILDPP 81
G +++K R + + + +E K L H N++ L+ V L P
Sbjct: 29 IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP 79
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 106 bits (266), Expect = 4e-25
Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 9/142 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
++ H N+V L + K LY ++RD L + R + ++++G
Sbjct: 83 YRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKG 142
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY-----VSTRWYR-- 469
+ ++H G H+D+K +N+ V I DFGL + W
Sbjct: 143 MGYLHAKGILHKDLKSKNVF-YDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHL 201
Query: 470 APEVLLHSTAYSAPIHLSRSQQ 491
APE++ + + L S+
Sbjct: 202 APEIIRQLSPDTEEDKLPFSKH 223
Score = 31.9 bits (73), Expect = 0.93
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 41 IKMKRKYYSWEEAMN--LREVKSLKKLSHANLVKLKEVILDPP 81
I++ E+ + REV + ++ H N+V + PP
Sbjct: 60 IRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 106 bits (266), Expect = 4e-25
Identities = 44/132 (33%), Positives = 58/132 (43%), Gaps = 17/132 (12%)
Query: 358 LKKLS-HANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVL 414
L + H N+++L E E D Y VFE M+ + I R F E ++ V
Sbjct: 64 LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS-ILSHIHKRRHF-NELEASVVVQDVA 121
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIRSRPYTDYVSTRW---- 467
L F+H G HRD+KPEN+LC VKI DF L I+ +ST
Sbjct: 122 SALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTP 181
Query: 468 -----YRAPEVL 474
Y APEV+
Sbjct: 182 CGSAEYMAPEVV 193
Score = 34.2 bits (79), Expect = 0.18
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSL 806
H S A L+ +L + +R +A Q L
Sbjct: 266 AHISCAAKDLISKLLVRDAKQRLSAAQVL 294
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 104 bits (262), Expect = 6e-25
Identities = 35/126 (27%), Positives = 67/126 (53%), Gaps = 15/126 (11%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+L H ++++L +++ +Y V E + + +++R K E+ R+ M+Q++ G
Sbjct: 65 HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITG 124
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR---SRPYT-----DYVSTRWY 468
+ ++H HG HRD+ NLL +KIADFGLA +++ + YT +Y+
Sbjct: 125 MLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYI----- 179
Query: 469 RAPEVL 474
+PE+
Sbjct: 180 -SPEIA 184
Score = 34.8 bits (81), Expect = 0.12
Identities = 8/43 (18%), Positives = 16/43 (37%), Gaps = 11/43 (25%)
Query: 762 NFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQ 804
+++ P S +A L+ +L NP+ R +
Sbjct: 228 DYEMP-----------SFLSIEAKDLIHQLLRRNPADRLSLSS 259
Score = 29.8 bits (68), Expect = 4.4
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 57 REVKSLKKLSHANLVKLKEVILDP 80
EVK +L H ++++L D
Sbjct: 60 NEVKIHCQLKHPSILELYNYFEDS 83
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 105 bits (263), Expect = 8e-25
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
L+K H N++ + +++ L V ++ + +LY+ + ++ + ++ Q QG
Sbjct: 86 LRKTRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQG 144
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR--SRPYTDYVSTRWYR--APE 472
+ ++H HRDMK N+ VKI DFGLA S T APE
Sbjct: 145 MDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPE 204
Query: 473 VL 474
V+
Sbjct: 205 VI 206
Score = 34.2 bits (79), Expect = 0.18
Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Query: 41 IKMKRKYYSWEEAMN--LREVKSLKKLSHANLVKLKEVILDPPL 82
+K+ + E EV L+K H N++ + L
Sbjct: 63 VKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNL 106
Score = 29.6 bits (67), Expect = 5.2
Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLSIKREVSLSFVLLKKLNR 824
+ + + + L+ + +RP Q LS + S L K+NR
Sbjct: 253 GYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS---LPKINR 307
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 105 bits (263), Expect = 8e-25
Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 19/136 (13%)
Query: 358 LKKLSHANLVKLKEVIRE----NDTLYFVFEYMKE-NLYQLIRDR---DKFLPESIIRNM 409
+ +H N+++L + + + K L+ I FL E I +
Sbjct: 80 HRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWL 139
Query: 410 MYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD-------- 461
+ + +GL +H G+ HRD+KP N+L + D G +
Sbjct: 140 LLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQD 199
Query: 462 ---YVSTRWYRAPEVL 474
T YRAPE+
Sbjct: 200 WAAQRCTISYRAPELF 215
Score = 37.3 bits (87), Expect = 0.019
Identities = 14/54 (25%), Positives = 18/54 (33%), Gaps = 9/54 (16%)
Query: 754 CYTLASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
LA PQ P S L+ SM+ +P +RP LS
Sbjct: 255 SVALAVQNQLSIPQS---------PRHSSALWQLLNSMMTVDPHQRPHIPLLLS 299
Score = 30.4 bits (69), Expect = 2.5
Identities = 8/40 (20%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 43 MKRKYYSWEEAMN--LREVKSLKKLSHANLVKLKEVILDP 80
+KR ++ RE + +H N+++L L
Sbjct: 59 LKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRE 98
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 106 bits (266), Expect = 1e-24
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Query: 358 LKKLS-HANLVKLKEV----IRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMM 410
+ S ++V++ +V L V E + E ++ D+ E +M
Sbjct: 108 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 167
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIRS-RPYTDYVSTR 466
+ + + ++H HRD+KPENLL ++K+ DFG A+E S T T
Sbjct: 168 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 227
Query: 467 WYRAPEVL 474
+Y APEVL
Sbjct: 228 YYVAPEVL 235
Score = 42.4 bits (100), Expect = 6e-04
Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 9/89 (10%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKKLNRLEKYRLKNAR 834
S + L+ ++L P++R T + ++ I + + L+ + R
Sbjct: 292 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP---QTPLHTSRVLKEDKER 348
Query: 835 ETLQAKKSKVDSFNLQLQNLKYEIFHLKK 863
+ K ++ S L + YE +KK
Sbjct: 349 --WEDVKEEMTSA-LATMRVDYEQIKIKK 374
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 106 bits (266), Expect = 2e-24
Identities = 36/158 (22%), Positives = 63/158 (39%), Gaps = 26/158 (16%)
Query: 358 LKKLS-HANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF------LPESIIRNMM 410
L + H N+++ + LY E NL L+ ++ E +++
Sbjct: 62 LTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 121
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTEL-------------VKIADFGLAREIR-- 455
Q+ G+A +H HRD+KP+N+L + + I+DFGL +++
Sbjct: 122 RQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 456 ----SRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRS 489
+ T +RAPE+L S L+RS
Sbjct: 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRS 219
Score = 49.8 bits (119), Expect = 3e-06
Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 14/106 (13%)
Query: 743 YILLHT--LPLYTCYTLASNM---NFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPS 797
Y +L P Y+ SN+ F + + + +A L+ M+ ++P
Sbjct: 230 YYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHD----RSLIAEATDLISQMIDHDPL 285
Query: 798 KRPTAQQSLS----IKREVSLSFVLLKKLNRLEKYRLKNARETLQA 839
KRPTA + L + L F LLK +RLE L
Sbjct: 286 KRPTAMKVLRHPLFWPKSKKLEF-LLKVSDRLEIENRDPPSALLMK 330
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 102 bits (256), Expect = 5e-24
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 19/136 (13%)
Query: 358 LKKLSHANLVKLKEVIREND----------------TLYFVFEYM-KENLYQLIRDR-DK 399
L KL H N+V D L+ E+ K L Q I R +
Sbjct: 58 LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 117
Query: 400 FLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS-RP 458
L + + + Q+ +G+ ++H +RD+KP N+ + T+ VKI DFGL +++
Sbjct: 118 KLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 177
Query: 459 YTDYVSTRWYRAPEVL 474
T T Y +PE +
Sbjct: 178 RTRSKGTLRYMSPEQI 193
Score = 38.4 bits (90), Expect = 0.008
Identities = 10/57 (17%), Positives = 18/57 (31%), Gaps = 6/57 (10%)
Query: 751 LYTCYTL---ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQ 804
L + A + F R + I L++ +L+ P RP +
Sbjct: 211 LAELLHVCDTAFETSKFFTDLRDGIISDIF---DKKEKTLLQKLLSKKPEDRPNTSE 264
Score = 30.7 bits (70), Expect = 1.9
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 56 LREVKSLKKLSHANLVKLKEVILD 79
REVK+L KL H N+V
Sbjct: 52 EREVKALAKLDHVNIVHYNGCWDG 75
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 104 bits (261), Expect = 8e-24
Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYF------VFEYMKENLYQLIRD-RDKFLPESIIRNMM 410
L+ L + VI + F FE + NLY+LI+ + + ++R
Sbjct: 147 LEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFA 206
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCM--GTELVKIADFGLAREIRSRPYTDYVSTRWY 468
+ +LQ L +H++ H D+KPEN+L G +K+ DFG + R YT Y+ +R+Y
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYT-YIQSRFY 265
Query: 469 RAPEVLLHSTAYSAPI 484
RAPEV+L Y PI
Sbjct: 266 RAPEVILG-ARYGMPI 280
Score = 34.3 bits (79), Expect = 0.19
Identities = 8/39 (20%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 785 IHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLK 820
+ ++ L ++P+ R T Q+L ++R + K
Sbjct: 386 LDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKPPTGEK 424
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 106 bits (266), Expect = 8e-24
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 13/130 (10%)
Query: 358 LKKLSHANLVKLKEVIRE------NDTLYFVFEYMKE-NLYQLI--RDRDKFLPESIIRN 408
+KKL+H N+V +EV ND EY + +L + + + L E IR
Sbjct: 66 MKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT 125
Query: 409 MMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIRSRPYTD-YVS 464
++ + L ++H + HRD+KPEN++ + KI D G A+E+ +V
Sbjct: 126 LLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVG 185
Query: 465 TRWYRAPEVL 474
T Y APE+L
Sbjct: 186 TLQYLAPELL 195
Score = 34.3 bits (78), Expect = 0.26
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 41 IKMKRKYYSWEEAMNL-REVKSLKKLSHANLVKLKEVILDP 80
IK R+ S + E++ +KKL+H N+V +EV
Sbjct: 44 IKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGL 84
Score = 33.5 bits (76), Expect = 0.36
Identities = 30/216 (13%), Positives = 66/216 (30%), Gaps = 20/216 (9%)
Query: 762 NFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLSIK--------REVS 813
KF P + + ++ ML ++ +R T Q+ ++ +
Sbjct: 253 AVKFSSVLPTP-NHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311
Query: 814 LSFVLLKKLNRLEKYRLK--NARETLQAKKSKVDSFNLQLQNLKYEIFHLKKEVVKCLQF 871
L V+ R+ Y + + L++ + + Q L Q+
Sbjct: 312 LLSVMNMVSGRVHTYPVTENENLQNLKSWLQQDTGIPEEEQELLQASGLALNSAQPLTQY 371
Query: 872 KSKDEDIDLVDEET---FFKDAPESISRPEVT-KEDPHQLKLARLEWELK-----QRKEL 922
ID E F D +++ P+++ P + + + + R+
Sbjct: 372 VIDCTVIDGRQGEGDLIFLFDNRKTVYEPQISLPAHPESVSIVLQDPKRPLTYTHLRRVW 431
Query: 923 ADECSLVERENESVAANINKKRGQLDNLAPLLKQLL 958
+ E A + +R + NL +L
Sbjct: 432 GQIWQTIRALKEDCARLLQGQRTSMVNLLRYNTELS 467
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 101 bits (253), Expect = 9e-24
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
K L+H N+VK RE + Y EY E L+ I +PE + +Q++
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE-LFDRIEPDIG-MPEPDAQRFFHQLMA 116
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTR----WYRAP 471
G+ ++H G HRD+KPENLL + +KI+DFGLA R ++ Y AP
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 472 EVL 474
E+L
Sbjct: 177 ELL 179
Score = 34.1 bits (79), Expect = 0.17
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 57 REVKSLKKLSHANLVKLKEVILDP 80
+E+ K L+H N+VK +
Sbjct: 54 KEICINKMLNHENVVKFYGHRREG 77
Score = 31.8 bits (73), Expect = 0.83
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 4/38 (10%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQ 804
+ P+ I + L+ +L NPS R T
Sbjct: 225 KTYLNPWKKI----DSAPLALLHKILVENPSARITIPD 258
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 101 bits (254), Expect = 1e-23
Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 25/134 (18%)
Query: 358 LKKLSHANLVKLKEVIR--ENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQV 413
LKKL H N+VKL EV+ D LY VFE + + L E R +
Sbjct: 90 LKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP---LSEDQARFYFQDL 146
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEV 473
++G+ ++H HRD+KP NLL +KIADFG++ E ++ +
Sbjct: 147 IKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNE--------------FKGSDA 192
Query: 474 LLHST----AYSAP 483
LL +T A+ AP
Sbjct: 193 LLSNTVGTPAFMAP 206
Score = 41.1 bits (97), Expect = 0.001
Identities = 18/64 (28%), Positives = 26/64 (40%)
Query: 17 IVPKSKEEDRIGGKPAVPNGPSISIKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEV 76
++ K K + G P + +E+ LKKL H N+VKL EV
Sbjct: 45 VLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEV 104
Query: 77 ILDP 80
+ DP
Sbjct: 105 LDDP 108
Score = 32.2 bits (74), Expect = 0.67
Identities = 13/79 (16%), Positives = 22/79 (27%), Gaps = 26/79 (32%)
Query: 731 CLLAGTERLKSSYILLHTLP-----LYTCYTLASNMNFKFPQFRRVPFTSIIPHASPDAI 785
C + G P + ++ + +FP P + D
Sbjct: 232 CFVFGQ------------CPFMDERIMCLHSKIKSQALEFPDQ---------PDIAEDLK 270
Query: 786 HLMESMLAYNPSKRPTAQQ 804
L+ ML NP R +
Sbjct: 271 DLITRMLDKNPESRIVVPE 289
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 101 bits (254), Expect = 1e-23
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ L+H ++V +ND ++ V E + L +L + R L E R + Q++ G
Sbjct: 69 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLG 127
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR---SRPYT-----DYVSTRWY 468
++HR+ HRD+K NL VKI DFGLA ++ R +Y+
Sbjct: 128 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYI----- 182
Query: 469 RAPEVL 474
APEVL
Sbjct: 183 -APEVL 187
Score = 35.2 bits (82), Expect = 0.089
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQ 804
H +P A L++ ML +P+ RPT +
Sbjct: 236 KHINPVAASLIQKMLQTDPTARPTINE 262
Score = 31.4 bits (72), Expect = 1.2
Identities = 5/24 (20%), Positives = 10/24 (41%)
Query: 57 REVKSLKKLSHANLVKLKEVILDP 80
E+ + L+H ++V D
Sbjct: 64 MEISIHRSLAHQHVVGFHGFFEDN 87
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 100 bits (252), Expect = 1e-23
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
L H N+++L + +Y + EY +Y+ ++ KF E + ++
Sbjct: 63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANA 121
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS-RPYT-----DYVSTRWYRA 470
L++ H HRD+KPENLL +KIADFG + S R DY+
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYL------P 175
Query: 471 PEVL 474
PE++
Sbjct: 176 PEMI 179
Score = 34.1 bits (79), Expect = 0.18
Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 11/50 (22%)
Query: 755 YTLASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQ 804
Y S + F FP + A L+ +L +NPS+RP ++
Sbjct: 216 YKRISRVEFTFP-----------DFVTEGARDLISRLLKHNPSQRPMLRE 254
Score = 28.7 bits (65), Expect = 8.5
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 57 REVKSLKKLSHANLVKLKEVILDP 80
REV+ L H N+++L D
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDA 81
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 99 bits (250), Expect = 3e-23
Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 10/143 (6%)
Query: 338 ILSRHVSSRDEMVVCFYR--KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIR 395
I+++ V ++ +M R L+ L H +++KL +VI+ D + V EY L+ I
Sbjct: 45 IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV 104
Query: 396 DRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR 455
RDK + E R Q++ + + HRH HRD+KPENLL VKIADFGL+ +
Sbjct: 105 QRDK-MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163
Query: 456 SRPYTDYVSTR----WYRAPEVL 474
+++ T Y APEV+
Sbjct: 164 D---GNFLKTSCGSPNYAAPEVI 183
Score = 33.0 bits (76), Expect = 0.44
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 57 REVKSLKKLSHANLVKLKEVI 77
RE+ L+ L H +++KL +VI
Sbjct: 62 REISYLRLLRHPHIIKLYDVI 82
Score = 31.4 bits (72), Expect = 1.1
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQ 804
SP A L++ ML NP R + +
Sbjct: 233 KFLSPGAAGLIKRMLIVNPLNRISIHE 259
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 101 bits (252), Expect = 4e-23
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 48/165 (29%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDR------------------- 397
+KKL H N+ +L EV + + V E +L +
Sbjct: 82 MKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 398 --------------------DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLC 437
D E +I N+M Q+ L ++H G HRD+KPEN L
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF 201
Query: 438 MGTE--LVKIADFGLAREIRS------RPYTDYVSTRWYRAPEVL 474
+ +K+ DFGL++E T T ++ APEVL
Sbjct: 202 STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL 246
Score = 40.6 bits (95), Expect = 0.002
Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 9/51 (17%)
Query: 757 LASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLS 807
L + F+ P + + SP A L+ ++L N +R A ++L
Sbjct: 289 LNKKLCFENPNYNVL---------SPLARDLLSNLLNRNVDERFDAMRALQ 330
Score = 35.6 bits (82), Expect = 0.071
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 38 SISIKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
++ R+ + EV+ +KKL H N+ +L EV D
Sbjct: 58 IMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 100 bits (251), Expect = 4e-23
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
K L+H N+VK RE + Y EY E L+ I +PE + +Q++
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE-LFDRIEPDIG-MPEPDAQRFFHQLMA 116
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTR----WYRAP 471
G+ ++H G HRD+KPENLL + +KI+DFGLA R ++ Y AP
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 472 EVL 474
E+L
Sbjct: 177 ELL 179
Score = 34.2 bits (79), Expect = 0.20
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 57 REVKSLKKLSHANLVKLKEVILDP 80
+E+ K L+H N+VK +
Sbjct: 54 KEICINKMLNHENVVKFYGHRREG 77
Score = 32.3 bits (74), Expect = 0.67
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 4/38 (10%)
Query: 767 QFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQ 804
+ P+ I + L+ +L NPS R T
Sbjct: 225 KTYLNPWKKI----DSAPLALLHKILVENPSARITIPD 258
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 100 bits (252), Expect = 4e-23
Identities = 27/135 (20%), Positives = 60/135 (44%), Gaps = 9/135 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKF-------LPESIIRNM 409
+ + + + + +I D +Y ++EYM +++ + +P +I+ +
Sbjct: 97 ITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCI 156
Query: 410 MYQVLQGLAFMHRH-GFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWY 468
+ VL +++H HRD+KP N+L VK++DFG + + + T +
Sbjct: 157 IKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEF 216
Query: 469 RAPEVLLHSTAYSAP 483
PE + ++Y+
Sbjct: 217 MPPEFFSNESSYNGA 231
Score = 35.9 bits (83), Expect = 0.064
Identities = 9/50 (18%), Positives = 17/50 (34%)
Query: 755 YTLASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQ 804
+ N T S + I ++ L NP++R T++
Sbjct: 270 IEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSED 319
Score = 33.2 bits (76), Expect = 0.44
Identities = 2/24 (8%), Positives = 11/24 (45%)
Query: 57 REVKSLKKLSHANLVKLKEVILDP 80
E++ + + + + + +I +
Sbjct: 92 NELQIITDIKNEYCLTCEGIITNY 115
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 100 bits (251), Expect = 5e-23
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE--NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
L ++ HAN++K+ ++ V E +L+ I + L E + + Q++
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR-LDEPLASYIFRQLVS 141
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD-YVSTRWYRAPEVL 474
+ ++ HRD+K EN++ +K+ DFG A + + T Y APEVL
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVL 201
Score = 33.9 bits (78), Expect = 0.24
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 42 KMKRKYYSWEEAMNL----REVKSLKKLSHANLVKLKEVI 77
K K W E L E+ L ++ HAN++K+ ++
Sbjct: 59 KEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF 98
Score = 33.5 bits (77), Expect = 0.27
Identities = 7/35 (20%), Positives = 15/35 (42%), Gaps = 5/35 (14%)
Query: 770 RVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQ 804
P+ S + + L+ +L P +R T ++
Sbjct: 242 HPPY-----LVSKELMSLVSGLLQPVPERRTTLEK 271
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 100 bits (250), Expect = 7e-23
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKEN-LYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ L+H ++V +ND ++ V E + L +L + R K L E R + Q++ G
Sbjct: 95 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLG 153
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI---RSRPYT-----DYVSTRWY 468
++HR+ HRD+K NL VKI DFGLA ++ R +Y+
Sbjct: 154 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYI----- 208
Query: 469 RAPEVL 474
APEVL
Sbjct: 209 -APEVL 213
Score = 35.0 bits (81), Expect = 0.11
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQ 804
H +P A L++ ML +P+ RPT +
Sbjct: 262 KHINPVAASLIQKMLQTDPTARPTINE 288
Score = 30.7 bits (70), Expect = 2.1
Identities = 5/24 (20%), Positives = 10/24 (41%)
Query: 57 REVKSLKKLSHANLVKLKEVILDP 80
E+ + L+H ++V D
Sbjct: 90 MEISIHRSLAHQHVVGFHGFFEDN 113
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 98.8 bits (247), Expect = 7e-23
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
L H N++++ + +Y + E+ LY+ ++ +F E M ++
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADA 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS-RPYT-----DYVSTRWYRA 470
L + H HRD+KPENLL +KIADFG + S R T DY+
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYL------P 180
Query: 471 PEVL 474
PE++
Sbjct: 181 PEMI 184
Score = 33.7 bits (78), Expect = 0.23
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 11/45 (24%)
Query: 760 NMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQ 804
N++ KFP P S + L+ +L Y+P +R +
Sbjct: 226 NVDLKFP-----------PFLSDGSKDLISKLLRYHPPQRLPLKG 259
Score = 29.5 bits (67), Expect = 4.7
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 57 REVKSLKKLSHANLVKLKEVILDP 80
RE++ L H N++++ D
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDR 86
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 99.3 bits (248), Expect = 8e-23
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 358 LKKLSHANLVKLKEVIR--ENDTLYFVFEYMKENLYQLIRDR--DKFLPESIIRNMMYQV 413
L++L H N+++L +V+ E +Y V EY + +++ D +K P Q+
Sbjct: 60 LRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML-DSVPEKRFPVCQAHGYFCQL 118
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTR----WYR 469
+ GL ++H G H+D+KP NLL +KI+ G+A + D T ++
Sbjct: 119 IDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQ 178
Query: 470 APEVLLHSTAYSAP 483
PE+ +S
Sbjct: 179 PPEIANGLDTFSGF 192
Score = 34.2 bits (79), Expect = 0.16
Identities = 7/23 (30%), Positives = 18/23 (78%)
Query: 57 REVKSLKKLSHANLVKLKEVILD 79
+E++ L++L H N+++L +V+ +
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYN 77
Score = 31.9 bits (73), Expect = 1.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQ 804
P L++ ML Y P+KR + +Q
Sbjct: 234 GDCGPPLSDLLKGMLEYEPAKRFSIRQ 260
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 98.9 bits (247), Expect = 9e-23
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 9/128 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRD--KFLPESIIRNMMYQVL 414
+K+L H N+V + + L V EY+ +LY+L+ + L E +M Y V
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVA 147
Query: 415 QGLAFMHRHG--FFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST---RWYR 469
+G+ ++H HR++K NLL VK+ DFGL+R S + + W
Sbjct: 148 KGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEW-M 206
Query: 470 APEVLLHS 477
APEVL
Sbjct: 207 APEVLRDE 214
Score = 31.1 bits (71), Expect = 1.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDPP 81
LREV +K+L H N+V + PP
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPP 107
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 98.5 bits (246), Expect = 1e-22
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 16/151 (10%)
Query: 337 HILSRHVS--------SRDEMVVC-FYR--KSLKKLSHANLVKLKEVIRENDTLYFVFEY 385
IL+ V+ E + F R + +LSH N+V + +V E+D Y V EY
Sbjct: 33 TILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEY 92
Query: 386 MK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVK 444
++ L + I ++ I Q+L G+ H HRD+KP+N+L + +K
Sbjct: 93 IEGPTLSEYIESHGPLSVDTAIN-FTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLK 151
Query: 445 IADFGLAREIRSRPYTD---YVSTRWYRAPE 472
I DFG+A+ + T + T Y +PE
Sbjct: 152 IFDFGIAKALSETSLTQTNHVLGTVQYFSPE 182
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 97.3 bits (243), Expect = 2e-22
Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 13/130 (10%)
Query: 358 LKKLSHANLVKLKEVI--RENDTLYFVFEYMKE-NLYQLIRD---RDKFLPESIIRNMMY 411
L++L H N+V+ + I R N TLY V EY + +L +I ++L E + +M
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 412 QVLQGLAFMHRHGFF-----HRDMKPENLLCMGTELVKIADFGLAREIRSRPY--TDYVS 464
Q+ L HR HRD+KP N+ G + VK+ DFGLAR + +V
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVG 178
Query: 465 TRWYRAPEVL 474
T +Y +PE +
Sbjct: 179 TPYYMSPEQM 188
Score = 38.0 bits (89), Expect = 0.011
Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 5/62 (8%)
Query: 751 LYTCYTL-----ASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQS 805
LY L A + + R F I S + ++ ML RP+ ++
Sbjct: 206 LYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
Query: 806 LS 807
L
Sbjct: 266 LE 267
Score = 31.1 bits (71), Expect = 1.5
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 42 KMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
M E+ M + EV L++L H N+V+ + I+D
Sbjct: 43 SMTEA----EKQMLVSEVNLLRELKHPNIVRYYDRIIDR 77
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 97.7 bits (244), Expect = 2e-22
Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 10/112 (8%)
Query: 358 LKKLS-HANLVKLKEV----IRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMM 410
+ S ++V++ +V L V E + E ++ D+ E +M
Sbjct: 64 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 123
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIRSRPY 459
+ + + ++H HRD+KPENLL ++K+ DFG A+E Y
Sbjct: 124 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKY 175
Score = 39.2 bits (92), Expect = 0.004
Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKKLNRLEKYRLKNAR 834
S + L+ ++L P++R T + ++ I + + L L++ K
Sbjct: 227 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKED--KERW 284
Query: 835 ETLQAKKSKV 844
E ++ + +
Sbjct: 285 EDVKEEMTSA 294
Score = 28.8 bits (65), Expect = 8.9
Identities = 6/21 (28%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Query: 57 REVKSLKKLS-HANLVKLKEV 76
REV+ + S ++V++ +V
Sbjct: 59 REVELHWRASQCPHIVRIVDV 79
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 98.1 bits (245), Expect = 3e-22
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ V EYM+ +L +R D + M+ V G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST------RWYRA 470
+ ++ G+ HRD+ N+L + K++DFGL+R + P Y +T RW A
Sbjct: 164 MRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWT-A 222
Query: 471 PEVLLH 476
PE +
Sbjct: 223 PEAIAF 228
Score = 30.7 bits (70), Expect = 2.1
Identities = 9/40 (22%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 41 IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKLKEVILD 79
IK + Y+ + + L E + + H N+++L+ V+
Sbjct: 82 IKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR 121
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 98.1 bits (245), Expect = 3e-22
Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Query: 338 ILSRHVSSRDEMVVCFYR--KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIR 395
+SR + + +M + R LK L H +++KL +VI + V EY L+ I
Sbjct: 41 FISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIV 100
Query: 396 DRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIR 455
++ + + E R Q++ + + HRH HRD+KPENLL VKIADFGL+ +
Sbjct: 101 EKKR-MTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159
Query: 456 SRPYTDYVSTR----WYRAPEVL 474
+++ T Y APEV+
Sbjct: 160 D---GNFLKTSCGSPNYAAPEVI 179
Score = 32.6 bits (75), Expect = 0.59
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 57 REVKSLKKLSHANLVKLKEVI 77
RE+ LK L H +++KL +VI
Sbjct: 58 REISYLKLLRHPHIIKLYDVI 78
Score = 31.5 bits (72), Expect = 1.2
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQ 804
SP A L+ M+ +P +R T Q+
Sbjct: 229 DFLSPGAQSLIRRMIVADPMQRITIQE 255
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 96.1 bits (240), Expect = 5e-22
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 338 ILSRHVSSRDEMVVCFYR--KSLKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQL 393
IL+R ++V R ++LK H +++KL +VI + V EY+ E L+
Sbjct: 43 ILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGE-LFDY 101
Query: 394 IRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE 453
I + + E R + Q+L + + HRH HRD+KPEN+L KIADFGL+
Sbjct: 102 ICKHGR-VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNM 160
Query: 454 IRSRPYTDYVSTR----WYRAPEVL 474
+ +++ T Y APEV+
Sbjct: 161 MSDG---EFLRTSCGSPNYAAPEVI 182
Score = 32.9 bits (76), Expect = 0.43
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 57 REVKSLKKLSHANLVKLKEVI 77
RE+++LK H +++KL +VI
Sbjct: 60 REIQNLKLFRHPHIIKLYQVI 80
Score = 31.8 bits (73), Expect = 0.94
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQ 804
+ + L+ ML +P KR T +
Sbjct: 232 EYLNRSVATLLMHMLQVDPLKRATIKD 258
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 98.2 bits (245), Expect = 5e-22
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + H N+++L+ V+ ++ + V EYM+ +L +R D + M+ + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST------RWYRA 470
+ ++ G+ HRD+ N+L + K++DFGL R + P Y + RW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWT-S 218
Query: 471 PEVLLH 476
PE + +
Sbjct: 219 PEAIAY 224
Score = 31.2 bits (71), Expect = 1.7
Identities = 9/40 (22%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 41 IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKLKEVILD 79
IK + Y+ ++ + L E + + H N+++L+ V+
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 97.5 bits (243), Expect = 5e-22
Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 18/140 (12%)
Query: 344 SSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKEN--LYQLIRDRDKFL 401
+E+V LS +V L +RE + E + E L QLI+
Sbjct: 96 FRVEELVA------CAGLSSPRIVPLYGAVREGPWVNIFMELL-EGGSLGQLIKQMGCL- 147
Query: 402 PESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGT-ELVKIADFGLAREIRSRPYT 460
PE + Q L+GL ++H H D+K +N+L + DFG A ++
Sbjct: 148 PEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207
Query: 461 DYVSTR-------WYRAPEV 473
+ T + APEV
Sbjct: 208 KSLLTGDYIPGTETHMAPEV 227
Score = 33.6 bits (77), Expect = 0.27
Identities = 11/67 (16%), Positives = 21/67 (31%), Gaps = 6/67 (8%)
Query: 772 PFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQSLSIKREVSLSFVLLKKLNRLEKYRLK 831
P I P +P ++ L P R +A + L+++ L+
Sbjct: 274 PIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKV------GKALQEVGGLKSPWKG 327
Query: 832 NARETLQ 838
+E
Sbjct: 328 EYKEPRG 334
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 97.4 bits (243), Expect = 5e-22
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + SH N+++L+ VI + + + EYM+ L + +R++D + M+ + G
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 159
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST------RWYRA 470
+ ++ + HRD+ N+L + K++DFGL+R + P Y ++ RW A
Sbjct: 160 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT-A 218
Query: 471 PEVLLH 476
PE + +
Sbjct: 219 PEAISY 224
Score = 31.5 bits (72), Expect = 1.4
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 41 IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKLKEVILD 79
IK + Y+ ++ ++ L E + + SH N+++L+ VI
Sbjct: 78 IKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK 117
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 96.3 bits (240), Expect = 6e-22
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 358 LKKLSHANLVKL----KEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQ 412
LK L H N+V+ + ++ + V E M L ++ R K + ++R+ Q
Sbjct: 79 LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-RFKVMKIKVLRSWCRQ 137
Query: 413 VLQGLAFMHRHGFF--HRDMKPENLLCMGTE-LVKIADFGLAREIRSRPYTDYVSTRWYR 469
+L+GL F+H HRD+K +N+ G VKI D GLA R+ + T +
Sbjct: 138 ILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFM 197
Query: 470 APEV 473
APE+
Sbjct: 198 APEM 201
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 95.7 bits (239), Expect = 6e-22
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ KLSH LVK V + +Y V EY+ L +R K L S + M Y V +G
Sbjct: 57 MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEG 116
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST----RWYRAPE 472
+AF+ H F HRD+ N L VK++DFG+ R + Y V T +W APE
Sbjct: 117 MAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWS-APE 175
Query: 473 VLLHS 477
V +
Sbjct: 176 VFHYF 180
Score = 31.0 bits (71), Expect = 1.4
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILD 79
+KM ++ E+ +E +++ KLSH LVK V
Sbjct: 37 VKMIKEGSMSEDEF-FQEAQTMMKLSHPKLVKFYGVCSK 74
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 96.3 bits (240), Expect = 7e-22
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 29/148 (19%)
Query: 356 KSLKKLSHANLVKLKEVIREND------------TLYFVFEYM-KENLYQLIRDRD--KF 400
K+L KL H +V+ E + LY + KENL + R +
Sbjct: 55 KALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEE 114
Query: 401 LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS---- 456
S+ ++ Q+ + + F+H G HRD+KP N+ ++VK+ DFGL +
Sbjct: 115 RERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
Query: 457 ----------RPYTDYVSTRWYRAPEVL 474
+T V T+ Y +PE +
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQI 202
Score = 40.4 bits (95), Expect = 0.002
Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 6/62 (9%)
Query: 743 YILLHTLPLYTCYTLASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTA 802
+ LL+ P T R + F + P +++ ML+ +P +RP A
Sbjct: 221 FELLY--PFST----QMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEA 274
Query: 803 QQ 804
Sbjct: 275 IN 276
Score = 32.3 bits (74), Expect = 0.72
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILD 79
I++ + +REVK+L KL H +V+ L+
Sbjct: 38 IRLPNR--ELAREKVMREVKALAKLEHPGIVRYFNAWLE 74
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 95.3 bits (238), Expect = 7e-22
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ KLSH LV+L V E + V E+M+ L +R + + M V +G
Sbjct: 57 MMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 116
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST----RWYRAPE 472
+A++ HRD+ N L +++K++DFG+ R + YT T +W +PE
Sbjct: 117 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA-SPE 175
Query: 473 VLLHS 477
V S
Sbjct: 176 VFSFS 180
Score = 31.4 bits (72), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILD 79
IK R+ EE + E + + KLSH LV+L V L+
Sbjct: 37 IKTIREGAMSEEDF-IEEAEVMMKLSHPKLVQLYGVCLE 74
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 97.4 bits (243), Expect = 9e-22
Identities = 43/122 (35%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ L H N+V+ KEVI L + EY LY+ I + + E R Q+L G
Sbjct: 70 HRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR-FSEDEARFFFQQLLSG 128
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTEL--VKIADFGLAREIR--SRPYTDYVSTRWYRAPE 472
+++ H HRD+K EN L G+ +KI DFG ++ S+P + V T Y APE
Sbjct: 129 VSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYIAPE 187
Query: 473 VL 474
VL
Sbjct: 188 VL 189
Score = 35.8 bits (83), Expect = 0.062
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 57 REVKSLKKLSHANLVKLKEVILDP 80
RE+ + + L H N+V+ KEVIL P
Sbjct: 65 REIINHRSLRHPNIVRFKEVILTP 88
Score = 31.6 bits (72), Expect = 1.4
Identities = 6/26 (23%), Positives = 13/26 (50%)
Query: 779 HASPDAIHLMESMLAYNPSKRPTAQQ 804
SP+ HL+ + +P+ R + +
Sbjct: 246 RISPECCHLISRIFVADPATRISIPE 271
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 96.6 bits (241), Expect = 9e-22
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+K L+H N+VKL EVI TLY + EY ++ + + + E R+ Q++
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR-MKEKEARSKFRQIVSA 126
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD-YVSTRWYRAPEVLL 475
+ + H+ HRD+K ENLL +KIADFG + E D + Y APE+
Sbjct: 127 VQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQ 186
Score = 35.0 bits (81), Expect = 0.11
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQ 804
+ S D +L++ L NP KR T +Q
Sbjct: 235 FYMSTDCENLLKRFLVLNPIKRGTLEQ 261
Score = 33.8 bits (78), Expect = 0.27
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 33 VPNGPSISIKM--KRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVI 77
+ G ++IK+ K + REV+ +K L+H N+VKL EVI
Sbjct: 37 ILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI 83
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 97.3 bits (243), Expect = 1e-21
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK+ SH N+V+L V + +Y V E ++ + +R L + M+ G
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAG 225
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST-----RWYRAP 471
+ ++ HRD+ N L ++KI+DFG++RE Y +W AP
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT-AP 284
Query: 472 EVLLH 476
E L +
Sbjct: 285 EALNY 289
Score = 29.9 bits (68), Expect = 3.9
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 41 IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKLKEVILD 79
+K R+ + L+E + LK+ SH N+V+L V
Sbjct: 144 VKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ 183
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 95.4 bits (238), Expect = 1e-21
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLP--ESIIRNMMYQVL 414
K L H N+V+ EN + E + +L L+R + L E I Q+L
Sbjct: 73 HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL 132
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTE-LVKIADFGLAR---EIRSRPYTDYVSTRWYRA 470
+GL ++H + HRD+K +N+L ++KI+DFG ++ I T + T Y A
Sbjct: 133 EGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMA 191
Query: 471 PEVLLHS-TAYSAP 483
PE++ Y
Sbjct: 192 PEIIDKGPRGYGKA 205
Score = 31.1 bits (71), Expect = 1.5
Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 4/43 (9%)
Query: 763 FKFPQFRRVPFTSIIP-HASPDAIHLMESMLAYNPSKRPTAQQ 804
FK F+ P IP S +A + +P KR A
Sbjct: 236 FKVGMFKVHP---EIPESMSAEAKAFILKCFEPDPDKRACAND 275
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 97.1 bits (242), Expect = 2e-21
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYF------VFEYMKENLYQLIRDRDKF-LPESIIRNMM 410
L+ ++ + ++ F VFE + NLY L+R+ + + ++ R
Sbjct: 104 LELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFA 163
Query: 411 YQVLQGLAFMHRH--GFFHRDMKPEN-LLC-MGTELVKIADFGLAREIRSRPYTDYVSTR 466
Q+ L F+ H D+KPEN LLC +KI DFG + ++ R Y Y+ +R
Sbjct: 164 QQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ-YIQSR 222
Query: 467 WYRAPEVLLHSTAYSAPI 484
+YR+PEVLL Y I
Sbjct: 223 FYRSPEVLLG-MPYDLAI 239
Score = 33.5 bits (77), Expect = 0.31
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 785 IHLMESMLAYNPSKRPTAQQSL 806
L+ ML Y+P R +L
Sbjct: 350 KDLILRMLDYDPKTRIQPYYAL 371
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 96.7 bits (240), Expect = 2e-21
Identities = 20/150 (13%), Positives = 42/150 (28%), Gaps = 7/150 (4%)
Query: 337 HILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRD 396
R +++ +++ + + + +L L
Sbjct: 121 GESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFST 180
Query: 397 RDKF------LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGL 450
D + + Q+++ A + G H P+NL M + + D
Sbjct: 181 LDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSA 240
Query: 451 AREIRSRPYTDYVSTRWYRAPEVLLHSTAY 480
++ +R Y E L STA
Sbjct: 241 LWKVGTRGPA-SSVPVTYAPREFLNASTAT 269
Score = 37.7 bits (87), Expect = 0.015
Identities = 9/69 (13%), Positives = 21/69 (30%), Gaps = 4/69 (5%)
Query: 743 YILLHTLPLYTCYTLASNMNFKFPQFRRVPFTSII----PHASPDAIHLMESMLAYNPSK 798
Y + + T ++K P R S+ L+ L ++ +
Sbjct: 284 YRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRR 343
Query: 799 RPTAQQSLS 807
R +++
Sbjct: 344 RLLPLEAME 352
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 95.8 bits (238), Expect = 2e-21
Identities = 22/142 (15%), Positives = 50/142 (35%), Gaps = 20/142 (14%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDR----DKFLPESIIRNM 409
+ LK +K + V E L I +K +P+ ++ +
Sbjct: 118 MERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISF 177
Query: 410 MYQVLQGLAFMHRHGFFHRDMKPENLLCMGTEL-----------VKIADFGLAREIRSRP 458
++L + +H H D+KP+N + L + + D G + +++ P
Sbjct: 178 AMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFP 237
Query: 459 YTDYVSTRW----YRAPEVLLH 476
+ + ++ E+L +
Sbjct: 238 KGTIFTAKCETSGFQCVEMLSN 259
Score = 34.2 bits (78), Expect = 0.22
Identities = 8/52 (15%), Positives = 17/52 (32%)
Query: 29 GKPAVPNGPSISIKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
N +K+++ WE + + ++ LK +K L
Sbjct: 88 DLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 94.2 bits (235), Expect = 3e-21
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ LSH LV+L V + ++ + EYM L +R+ + M V +
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 132
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST----RWYRAPE 472
+ ++ F HRD+ N L +VK++DFGL+R + YT V + RW PE
Sbjct: 133 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS-PPE 191
Query: 473 VLLHS 477
VL++S
Sbjct: 192 VLMYS 196
Score = 31.4 bits (72), Expect = 1.3
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILD 79
IKM ++ E+ + E K + LSH LV+L V
Sbjct: 53 IKMIKEGSMSEDEF-IEEAKVMMNLSHEKLVQLYGVCTK 90
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 95.5 bits (238), Expect = 4e-21
Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 382 VFEYMKENLYQLIRD-RDKFLPESIIRNMMYQVLQGLAFMHRH-GFFHRDMKPENLL--- 436
VFE + ENL LI+ + +P ++ + Q+L GL +MHR G H D+KPEN+L
Sbjct: 108 VFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI 167
Query: 437 ---CMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAYSAPI 484
+KIAD G A YT+ + TR YR+PEVLL +
Sbjct: 168 VDSPENLIQIKIADLGNACWYDEH-YTNSIQTREYRSPEVLL-GAPWGCGA 216
Score = 35.8 bits (83), Expect = 0.068
Identities = 6/22 (27%), Positives = 9/22 (40%)
Query: 785 IHLMESMLAYNPSKRPTAQQSL 806
+ ML +P KR A +
Sbjct: 311 SDFLSPMLQLDPRKRADAGGLV 332
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 93.9 bits (234), Expect = 4e-21
Identities = 31/148 (20%), Positives = 56/148 (37%), Gaps = 26/148 (17%)
Query: 358 LKKLS-HANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDK---FLPESIIRNMMYQ 412
L H+++V+ E+D + EY +L I + + + E+ +++++ Q
Sbjct: 64 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 123
Query: 413 VLQGLAFMHRHGFFHRDMKPENLL-------------------CMGTELVKIADFGLARE 453
V +GL ++H H D+KP N+ + KI D G
Sbjct: 124 VGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 183
Query: 454 IRSRPYTDYVSTRWYRAPEVLLHSTAYS 481
I S P + A EVL + +
Sbjct: 184 I-SSPQV-EEGDSRFLANEVLQENYTHL 209
Score = 36.1 bits (84), Expect = 0.044
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 769 RRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQ 804
R+ I S + L++ M+ +P +RP+A
Sbjct: 241 RQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMA 276
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 93.1 bits (232), Expect = 1e-20
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 5/117 (4%)
Query: 360 KLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLA 418
+L ++V + + + LY + +L ++R + P + ++ Q+ L
Sbjct: 90 RLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVA-IVRQIGSALD 148
Query: 419 FMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT---DYVSTRWYRAPE 472
H G HRD+KPEN+L + + DFG+A T + V T +Y APE
Sbjct: 149 AAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPE 205
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 91.9 bits (229), Expect = 2e-20
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRD-KFLPESIIRNMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ + + + ++ M Q+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST----RWYRAP 471
+ ++ + F HRD+ N L LVK+ADFGL+R + YT + +W AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT-AP 181
Query: 472 EVLLHS 477
E L ++
Sbjct: 182 ESLAYN 187
Score = 29.9 bits (68), Expect = 3.6
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVIL-DPPL 82
+K ++ E L+E +K++ H NLV+L V +PP
Sbjct: 43 VKTLKEDTMEVEEF-LKEAAVMKEIKHPNLVQLLGVCTREPPF 84
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 92.0 bits (229), Expect = 2e-20
Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 12/133 (9%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ L+H N+VKL ++ V E++ +LY + D+ + S+ +M + G
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 417 LAFMHRHGFF--HRDMKPENLL-----CMGTELVKIADFGLAREIRSRPYTDYVSTRWYR 469
+ +M HRD++ N+ K+ADFGL+++ + + +
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ-SVHSVSGLLGNFQWM 193
Query: 470 APEVLLH-STAYS 481
APE + +Y+
Sbjct: 194 APETIGAEEESYT 206
Score = 31.9 bits (73), Expect = 0.82
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDPP 81
REV + L+H N+VKL ++ +PP
Sbjct: 71 QREVFIMSNLNHPNIVKLYGLMHNPP 96
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 93.0 bits (231), Expect = 2e-20
Identities = 37/171 (21%), Positives = 61/171 (35%), Gaps = 18/171 (10%)
Query: 328 YTCNLDQDNHILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEYM- 386
+D S + + S N V + LY +
Sbjct: 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCR 144
Query: 387 KENLYQLIRDR--DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVK 444
KENL + R + + ++ Q+ + + F+H G HRD+KP N+ ++VK
Sbjct: 145 KENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVK 204
Query: 445 IADFGLAREI--------------RSRPYTDYVSTRWYRAPEVLLHSTAYS 481
+ DFGL + +T V T+ Y +PE +H YS
Sbjct: 205 VGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQ-IHGNNYS 254
Score = 40.3 bits (94), Expect = 0.002
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 744 ILLHTLPLYTCYTLASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQ 803
++L L LY+ T R + F + P +++ ML+ +P++RP A
Sbjct: 264 LILFEL-LYSFST-QMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEAT 321
Query: 804 Q 804
Sbjct: 322 D 322
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 92.0 bits (229), Expect = 2e-20
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 10/127 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDK--FLPESIIRNMMYQVL 414
L +++H N+VKL + V EY + +LY ++ + + + + Q
Sbjct: 55 LSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 112
Query: 415 QGLAFMHRH---GFFHRDMKPEN-LLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRA 470
QG+A++H HRD+KP N LL G ++KI DFG A +I++ T+ + + A
Sbjct: 113 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-MTNNKGSAAWMA 171
Query: 471 PEVLLHS 477
PEV S
Sbjct: 172 PEVFEGS 178
Score = 28.8 bits (65), Expect = 7.6
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 51 EEAMNLREVKSLKKLSHANLVKLKEVILDP 80
E + E++ L +++H N+VKL L+P
Sbjct: 44 ERKAFIVELRQLSRVNHPNIVKLYGACLNP 73
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 92.3 bits (230), Expect = 2e-20
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 337 HILSRHVS--------SRDEMVVC-FYR--KSLKKLSHANLVKL----KEVIRENDTLYF 381
R V+ +RD F R ++ L+H +V + + Y
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 382 VFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGT 440
V EY+ L ++ P+ I ++ Q L F H++G HRD+KP N++ T
Sbjct: 94 VMEYVDGVTLRDIVHTEGPMTPKRAIE-VIADACQALNFSHQNGIIHRDVKPANIMISAT 152
Query: 441 ELVKIADFGLAR 452
VK+ DFG+AR
Sbjct: 153 NAVKVMDFGIAR 164
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 91.6 bits (228), Expect = 5e-20
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYF------VFEYMKENLYQLIRDRDKF-LPESIIRNMM 410
L+ L+ + ++ + VFE + + Y I++ IR M
Sbjct: 65 LEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTEL-------------------VKIADFGLA 451
YQ+ + + F+H + H D+KPEN+L + ++ +K+ DFG A
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184
Query: 452 REIRSRPYTDYVSTRWYRAPEVLLHSTAYSAPI 484
T VSTR YRAPEV+L + +S P
Sbjct: 185 TYDDEHHST-LVSTRHYRAPEVIL-ALGWSQPC 215
Score = 31.9 bits (73), Expect = 1.1
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 785 IHLMESMLAYNPSKRPTAQQSL 806
L++ ML Y+P+KR T +++L
Sbjct: 306 FDLIQKMLEYDPAKRITLREAL 327
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 91.6 bits (228), Expect = 6e-20
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 28/153 (18%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYF------VFEYMKENLYQLIRDRDKF-LPESIIRNMM 410
LKK+ + + +D F FE + +N ++ +++ + P +R+M
Sbjct: 70 LKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMA 129
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLL-------------------CMGTELVKIADFGLA 451
YQ+ L F+H + H D+KPEN+L + +++ADFG A
Sbjct: 130 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 189
Query: 452 REIRSRPYTDYVSTRWYRAPEVLLHSTAYSAPI 484
T V+TR YR PEV+L ++ P
Sbjct: 190 TFDHEHHTT-IVATRHYRPPEVIL-ELGWAQPC 220
Score = 33.8 bits (78), Expect = 0.22
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 772 PFTSIIPHASPD---AIHLMESMLAYNPSKRPTAQQSL 806
P S + S + LM ML ++P++R T ++L
Sbjct: 295 PLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEAL 332
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 92.9 bits (231), Expect = 7e-20
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 15/146 (10%)
Query: 338 ILSRHVSSRDEMVVCFYR--KSLKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQL 393
IL+R ++V R ++LK H +++KL +VI ++ V EY+ E L+
Sbjct: 48 ILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGE-LFDY 106
Query: 394 IRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE 453
I + L E R + Q+L G+ + HRH HRD+KPEN+L KIADFGL+
Sbjct: 107 ICKNGR-LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNM 165
Query: 454 IRSRPYTDYVSTRW-----YRAPEVL 474
+ +++ T Y APEV+
Sbjct: 166 MSD---GEFLRT-SCGSPNYAAPEVI 187
Score = 32.5 bits (74), Expect = 0.70
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 57 REVKSLKKLSHANLVKLKEVI 77
RE+++LK H +++KL +VI
Sbjct: 65 REIQNLKLFRHPHIIKLYQVI 85
Score = 31.3 bits (71), Expect = 1.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQ 804
+ +P I L++ ML +P KR T +
Sbjct: 237 QYLNPSVISLLKHMLQVDPMKRATIKD 263
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 90.0 bits (224), Expect = 8e-20
Identities = 22/133 (16%), Positives = 49/133 (36%), Gaps = 11/133 (8%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ KLSH +LV V D V E++K +L ++ + + Q+
Sbjct: 66 MSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA 125
Query: 417 LAFMHRHGFFHRDM--------KPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWY 468
+ F+ + H ++ + E+ +K++D G++ + + W
Sbjct: 126 MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL-QERIPWV 184
Query: 469 RAPEVLLHSTAYS 481
PE + + +
Sbjct: 185 -PPECIENPKNLN 196
Score = 28.8 bits (65), Expect = 7.8
Identities = 9/39 (23%), Positives = 15/39 (38%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILD 79
+K+ K + + KLSH +LV V +
Sbjct: 45 LKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 91.6 bits (227), Expect = 9e-20
Identities = 23/132 (17%), Positives = 49/132 (37%), Gaps = 10/132 (7%)
Query: 358 LKKLSHANLVKLKEVIREND--TLYFVFEYMKENLYQLIRD------RDKFLPESIIRNM 409
+K +++++ R+ + +F++ M+ NL K L +
Sbjct: 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQL 211
Query: 410 MYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYR 469
QV++ LA +H +G H ++P +++ V + F R +R +
Sbjct: 212 TLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLV--RDGARVVSSVSRGFE 269
Query: 470 APEVLLHSTAYS 481
PE+ S
Sbjct: 270 PPELEARRATIS 281
Score = 35.4 bits (81), Expect = 0.092
Identities = 6/27 (22%), Positives = 8/27 (29%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQ 804
+ L+E L Y R Q
Sbjct: 330 KNIPQPVRALLEGFLRYPKEDRLLPLQ 356
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 89.2 bits (222), Expect = 1e-19
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 358 LKKLSHANLVKLKEVI-RENDTLYFVFEYMKE-NLYQLIRDRD-KFLPESIIRNMMYQVL 414
+ +L H+NLV+L VI E LY V EYM + +L +R R L + V
Sbjct: 68 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 127
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
+ + ++ + F HRD+ N+L + K++DFGL +E S T + +W APE L
Sbjct: 128 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT-APEAL 186
Query: 475 LHS 477
Sbjct: 187 REK 189
Score = 32.2 bits (74), Expect = 0.69
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 35 NGPSISIKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILD--PPL 82
G +++K + + + L E + +L H+NLV+L VI++ L
Sbjct: 43 RGNKVAVKCIKNDATAQAF--LAEASVMTQLRHSNLVQLLGVIVEEKGGL 90
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 90.4 bits (225), Expect = 1e-19
Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 10/126 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + + ++ +L + T+ + + M L +R+ + + N Q+ +G
Sbjct: 71 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST------RWYRA 470
+ ++ HRD+ N+L + VKI DFGLA+ + + Y + +W A
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHAEGGKVPIKWM-A 187
Query: 471 PEVLLH 476
E +LH
Sbjct: 188 LESILH 193
Score = 34.9 bits (81), Expect = 0.10
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 41 IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKLKEVILDPPL 82
IK R+ S + L E + + + ++ +L + L +
Sbjct: 49 IKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV 91
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 89.7 bits (223), Expect = 1e-19
Identities = 35/135 (25%), Positives = 55/135 (40%), Gaps = 12/135 (8%)
Query: 358 LKKLSHANLVKLKEVIRENDT--LYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVL 414
LK L H N+VK K V L + EY+ +L ++ + + + Q+
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST-------RW 467
+G+ ++ + HRD+ N+L VKI DFGL + + + W
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF-FKVKEPGESPIFW 183
Query: 468 YRAPEVLLHSTAYSA 482
Y APE L S A
Sbjct: 184 Y-APESLTESKFSVA 197
Score = 32.3 bits (74), Expect = 0.69
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDP 80
RE++ LK L H N+VK K V
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSA 83
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 90.2 bits (224), Expect = 1e-19
Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 27/144 (18%)
Query: 358 LKKLS-HANLVKL-------KEVIRENDTLYFVFEYMKEN--LYQLIRDRDK-FLPESII 406
+KKLS H N+V+ KE + + + + + L + + L +
Sbjct: 79 MKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTV 138
Query: 407 RNMMYQVLQGLAFMHRHG--FFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVS 464
+ YQ + + MHR HRD+K ENLL +K+ DFG A I P + +
Sbjct: 139 LKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSA 198
Query: 465 TRW--------------YRAPEVL 474
R YR PE++
Sbjct: 199 QRRALVEEEITRNTTPMYRTPEII 222
Score = 34.7 bits (80), Expect = 0.12
Identities = 8/45 (17%), Positives = 14/45 (31%), Gaps = 9/45 (20%)
Query: 760 NMNFKFPQFRRVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQ 804
N + P L+ +ML NP +R + +
Sbjct: 263 NGKYSIPPH---------DTQYTVFHSLIRAMLQVNPEERLSIAE 298
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 93.4 bits (232), Expect = 1e-19
Identities = 34/157 (21%), Positives = 67/157 (42%), Gaps = 27/157 (17%)
Query: 335 DNHILSRHV------SSRDEMVVC-FYR--KSLKKLSHANLVKLKEVIREND-----TLY 380
D ++ R V S D + L ++ H ++V++ + D Y
Sbjct: 101 DRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGY 160
Query: 381 FVFEYMK-ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG 439
V EY+ ++L + + LP + + ++L L+++H G + D+KPEN++ +
Sbjct: 161 IVMEYVGGQSLKRSKGQK---LPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIM-LT 216
Query: 440 TELVKIADFGLAREIRSRPYTDY---VSTRWYRAPEV 473
E +K+ D G I + T ++APE+
Sbjct: 217 EEQLKLIDLGAVSRI-----NSFGYLYGTPGFQAPEI 248
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 88.8 bits (221), Expect = 2e-19
Identities = 36/127 (28%), Positives = 51/127 (40%), Gaps = 11/127 (8%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ L H NL++L V+ + V E +L +R + QV +G
Sbjct: 75 MHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST-------RWYR 469
+ ++ F HRD+ NLL +LVKI DFGL R + YV W
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND-DHYVMQEHRKVPFAWC- 191
Query: 470 APEVLLH 476
APE L
Sbjct: 192 APESLKT 198
Score = 36.5 bits (85), Expect = 0.029
Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 17/83 (20%)
Query: 33 VPNGPSIS--IKMKRKYYSWEEAMN---LREVKSLKKLSHANLVKLKEVILDPP------ 81
P+G ++S +K + + +REV ++ L H NL++L V+L PP
Sbjct: 41 APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTE 100
Query: 82 ------LHAYFQVGGPTTRVTSL 98
L + + +L
Sbjct: 101 LAPLGSLLDRLRKHQGHFLLGTL 123
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 88.1 bits (219), Expect = 3e-19
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 13/127 (10%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+++ H ++VKL VI E + ++ + E L ++ R L + + YQ+
Sbjct: 70 MRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 128
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST-------RWYR 469
LA++ F HRD+ N+L + VK+ DFGL+R + + Y +W
Sbjct: 129 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED---STYYKASKGKLPIKWM- 184
Query: 470 APEVLLH 476
APE +
Sbjct: 185 APESINF 191
Score = 35.3 bits (82), Expect = 0.085
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 15/80 (18%)
Query: 34 PNGPSIS--IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKLKEVILDPP--------- 81
P P+++ IK + S L+E ++++ H ++VKL VI + P
Sbjct: 39 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCT 98
Query: 82 ---LHAYFQVGGPTTRVTSL 98
L ++ QV + + SL
Sbjct: 99 LGELRSFLQVRKYSLDLASL 118
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 87.7 bits (218), Expect = 3e-19
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 8/127 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRD-KFLPESIIRNMMYQVLQ 415
+K+L H LV+L V+ + + +Y + EYM+ +L ++ L + + +M Q+ +
Sbjct: 62 MKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST----RWYRAP 471
G+AF+ + HRD++ N+L T KIADFGLAR I YT +W AP
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT-AP 179
Query: 472 EVLLHST 478
E + + T
Sbjct: 180 EAINYGT 186
Score = 33.3 bits (77), Expect = 0.26
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDPPL 82
+K ++ +A L E +K+L H LV+L V+ P+
Sbjct: 42 VKSLKQGSMSPDAF-LAEANLMKQLQHQRLVRLYAVVTQEPI 82
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 91.0 bits (226), Expect = 4e-19
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDK-FLPESIIRNMMYQVLQ 415
+K++ H NLV+L V Y + E+M NL +R+ ++ + ++ M Q+
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST----RWYRAP 471
+ ++ + F HR++ N L LVK+ADFGL+R + YT + +W AP
Sbjct: 330 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT-AP 388
Query: 472 EVLLHST 478
E L ++
Sbjct: 389 ESLAYNK 395
Score = 30.9 bits (70), Expect = 2.3
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVIL-DPPL 82
+K ++ E L+E +K++ H NLV+L V +PP
Sbjct: 250 VKTLKEDTMEVEEF-LKEAAVMKEIKHPNLVQLLGVCTREPPF 291
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 88.1 bits (219), Expect = 4e-19
Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 10/134 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDT--LYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVL 414
L+ L H N+VK K + E+ + + E++ +L + + + Q+
Sbjct: 77 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 136
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST------RWY 468
+G+ ++ + HRD+ N+L VKI DFGL + I + V WY
Sbjct: 137 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWY 196
Query: 469 RAPEVLLHSTAYSA 482
APE L+ S Y A
Sbjct: 197 -APECLMQSKFYIA 209
Score = 31.5 bits (72), Expect = 1.1
Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 41 IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKLKEVILDPP 81
+K + + +E++ L+ L H N+VK K + +
Sbjct: 55 VKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 87.3 bits (217), Expect = 4e-19
Identities = 19/127 (14%), Positives = 46/127 (36%), Gaps = 11/127 (8%)
Query: 358 LKKLSHANLVKLKEVIRE--NDTLYFVFEYMKE-NLYQLIRD-RDKFLPESIIRNMMYQV 413
L+ SH N++ + + + +M +LY ++ + + + +S +
Sbjct: 61 LRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDM 120
Query: 414 LQGLAFMHRHGFF--HRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST-RWYRA 470
+G+AF+H + +++ +I+ + +S + W A
Sbjct: 121 ARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS---PGRMYAPAWV-A 176
Query: 471 PEVLLHS 477
PE L
Sbjct: 177 PEALQKK 183
Score = 31.8 bits (73), Expect = 0.80
Identities = 7/32 (21%), Positives = 12/32 (37%)
Query: 57 REVKSLKKLSHANLVKLKEVILDPPLHAYFQV 88
E L+ SH N++ + PP +
Sbjct: 56 EECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 87.7 bits (218), Expect = 5e-19
Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 11/127 (8%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ +L + +V+L V + + L V E L++ + + + +P S + +++QV G
Sbjct: 64 MHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 122
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST-------RWYR 469
+ ++ F HRD+ N+L + KI+DFGL++ + + Y + +WY
Sbjct: 123 MKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY-YTARSAGKWPLKWY- 180
Query: 470 APEVLLH 476
APE +
Sbjct: 181 APECINF 187
Score = 33.4 bits (77), Expect = 0.27
Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 41 IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKLKEVILDPPL 82
IK+ ++ + +RE + + +L + +V+L V L
Sbjct: 42 IKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL 84
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 90.1 bits (224), Expect = 5e-19
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 358 LKKLSHANLVKLKEVI-RENDTLYFVFEYMKE-NLYQLIRDRD-KFLPESIIRNMMYQVL 414
+ +L H+NLV+L VI E LY V EYM + +L +R R L + V
Sbjct: 240 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 299
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVL 474
+ + ++ + F HRD+ N+L + K++DFGL +E S T + +W APE L
Sbjct: 300 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT-APEAL 358
Query: 475 LH 476
Sbjct: 359 RE 360
Score = 31.2 bits (71), Expect = 1.6
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 35 NGPSISIKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILD--PPL 82
G +++K + + + L E + +L H+NLV+L VI++ L
Sbjct: 215 RGNKVAVKCIKNDATAQAF--LAEASVMTQLRHSNLVQLLGVIVEEKGGL 262
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 87.3 bits (217), Expect = 6e-19
Identities = 30/126 (23%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+++L + +V++ + E ++ V E + L + ++ ++II +++QV G
Sbjct: 72 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMG 129
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST------RWYRA 470
+ ++ F HRD+ N+L + KI+DFGL++ +R+ T +WY A
Sbjct: 130 MKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-A 188
Query: 471 PEVLLH 476
PE + +
Sbjct: 189 PECINY 194
Score = 33.4 bits (77), Expect = 0.33
Identities = 5/44 (11%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 41 IKMKRKYYSWEEAMN--LREVKSLKKLSHANLVKLKEVILDPPL 82
+K+ + + + L E +++L + +V++ +
Sbjct: 49 VKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW 92
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 87.8 bits (218), Expect = 7e-19
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 12/135 (8%)
Query: 358 LKKLSHANLVKLKEVIRENDT--LYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVL 414
LK L H N+VK K V L + EY+ +L ++ + + + Q+
Sbjct: 96 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 155
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST-------RW 467
+G+ ++ + HRD+ N+L VKI DFGL + + Y W
Sbjct: 156 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEY-YKVKEPGESPIFW 214
Query: 468 YRAPEVLLHSTAYSA 482
Y APE L S A
Sbjct: 215 Y-APESLTESKFSVA 228
Score = 31.6 bits (72), Expect = 1.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDP 80
RE++ LK L H N+VK K V
Sbjct: 90 EREIEILKSLQHDNIVKYKGVCYSA 114
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 86.9 bits (216), Expect = 9e-19
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 13/127 (10%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+K L H ++VKL +I E + + + E L + L + Q+ +
Sbjct: 67 MKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKA 125
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST-------RWYR 469
+A++ HRD+ N+L E VK+ DFGL+R I DY +W
Sbjct: 126 MAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIED---EDYYKASVTRLPIKWM- 181
Query: 470 APEVLLH 476
+PE +
Sbjct: 182 SPESINF 188
Score = 34.5 bits (80), Expect = 0.15
Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 15/80 (18%)
Query: 34 PNGPSIS--IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKLKEVILDPP--------- 81
G I+ +K +K + + + E +K L H ++VKL +I + P
Sbjct: 36 HKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYP 95
Query: 82 ---LHAYFQVGGPTTRVTSL 98
L Y + + +V +L
Sbjct: 96 YGELGHYLERNKNSLKVLTL 115
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 88.1 bits (219), Expect = 9e-19
Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 28/129 (21%)
Query: 382 VFEYMKENLYQLIRDRDKF-LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLL---- 436
+FE + +LY++I + I+ ++L+ L ++ + H D+KPEN+L
Sbjct: 114 IFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDP 173
Query: 437 ---------------------CMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLL 475
+ +K+ DFG A + ++TR YRAPEV+L
Sbjct: 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGS-IINTRQYRAPEVIL 232
Query: 476 HSTAYSAPI 484
+ +
Sbjct: 233 -NLGWDVSS 240
Score = 35.8 bits (83), Expect = 0.062
Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Query: 732 LLAGTERLKSSYILLHTLPLYTCYTLASNMNFKFPQFRRVPFTSIIPHASPDAIHLMESM 791
+L + S + AS++N + +P II H + S+
Sbjct: 282 MLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH--ELFCDFLYSI 339
Query: 792 LAYNPSKRPTAQQSL 806
L +P+ RP+ + L
Sbjct: 340 LQIDPTLRPSPAELL 354
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 87.4 bits (217), Expect = 9e-19
Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 12/129 (9%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ L HA++V+L + +L V +Y+ +L +R L ++ N Q+ +G
Sbjct: 69 IGSLDHAHIVRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKG 127
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST-------RWYR 469
+ ++ HG HR++ N+L V++ADFG+A + + +W
Sbjct: 128 MYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK--QLLYSEAKTPIKWM- 184
Query: 470 APEVLLHST 478
A E +
Sbjct: 185 ALESIHFGK 193
Score = 33.8 bits (78), Expect = 0.20
Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 41 IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKLKEVILDPPL 82
IK+ + + ++ L HA++V+L + L
Sbjct: 47 IKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSL 89
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 89.4 bits (222), Expect = 1e-18
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD-KFLPESIIRNMMYQVLQ 415
+K L H LVKL V+ + + +Y + E+M K +L ++ + P + + Q+ +
Sbjct: 237 MKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAE 295
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST----RWYRAP 471
G+AF+ + + HRD++ N+L + + KIADFGLAR I YT +W AP
Sbjct: 296 GMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT-AP 354
Query: 472 EVLLHST 478
E + +
Sbjct: 355 EAINFGS 361
Score = 33.5 bits (77), Expect = 0.31
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDPPL 82
+K + EA L E +K L H LVKL V+ P+
Sbjct: 217 VKTMKPGSMSVEAF-LAEANVMKTLQHDKLVKLHAVVTKEPI 257
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 86.6 bits (215), Expect = 2e-18
Identities = 37/135 (27%), Positives = 53/135 (39%), Gaps = 12/135 (8%)
Query: 358 LKKLSHANLVKLKEVIRENDT--LYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVL 414
LK L +VK + V L V EY+ L ++ L S + Q+
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 137
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST-------RW 467
+G+ ++ HRD+ N+L VKIADFGLA+ + YV W
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY-YVVREPGQSPIFW 196
Query: 468 YRAPEVLLHSTAYSA 482
Y APE L +
Sbjct: 197 Y-APESLSDNIFSRQ 210
Score = 31.9 bits (73), Expect = 1.0
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDP 80
+K + ++ RE++ LK L +VK + V P
Sbjct: 57 VKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP 96
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 87.1 bits (216), Expect = 2e-18
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGL 417
L+KL H N ++ + T + V EY + L+ K L E I + + LQGL
Sbjct: 108 LQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 418 AFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHS 477
A++H H HRD+K N+L LVK+ DFG A + +V T ++ APEV+L
Sbjct: 168 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--NSFVGTPYWMAPEVILAM 225
Query: 478 T 478
Sbjct: 226 D 226
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 88.3 bits (219), Expect = 2e-18
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 8/127 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD-KFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM K +L ++ K+L + +M Q+
Sbjct: 233 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST----RWYRAP 471
G+A++ R + HRD++ N+L + K+ADFGLAR I YT +W AP
Sbjct: 292 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT-AP 350
Query: 472 EVLLHST 478
E L+
Sbjct: 351 EAALYGR 357
Score = 34.3 bits (79), Expect = 0.16
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDPPL 82
IK + EA L+E + +KKL H LV+L V+ + P+
Sbjct: 213 IKTLKPGTMSPEAF-LQEAQVMKKLRHEKLVQLYAVVSEEPI 253
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 85.8 bits (213), Expect = 3e-18
Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 10/126 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ + + ++ +L + T+ + + M L +R+ + + N Q+ +G
Sbjct: 71 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST------RWYRA 470
+ ++ HRD+ N+L + VKI DFGLA+ + + Y + +W A
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHAEGGKVPIKWM-A 187
Query: 471 PEVLLH 476
E +LH
Sbjct: 188 LESILH 193
Score = 33.5 bits (77), Expect = 0.29
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 41 IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKLKEVILDPPL 82
IK R+ S + L E + + + ++ +L + L +
Sbjct: 49 IKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV 91
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 87.0 bits (215), Expect = 4e-18
Identities = 23/148 (15%), Positives = 49/148 (33%), Gaps = 13/148 (8%)
Query: 338 ILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIREND-----TLYFVFEYMKENLYQ 392
+L + + V + + K+ V + + +F++ M+ NL
Sbjct: 134 LLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQT 193
Query: 393 LIR------DRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIA 446
K L + QV++ LA +H +G H ++P +++ V +
Sbjct: 194 FGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLT 253
Query: 447 DFGLAREIRSRPYTDYVSTRWYRAPEVL 474
F + + R + PE
Sbjct: 254 GFEHLVRDGASAVSP--IGRGFAPPETT 279
Score = 31.9 bits (72), Expect = 1.0
Identities = 6/29 (20%), Positives = 10/29 (34%)
Query: 778 PHASPDAIHLMESMLAYNPSKRPTAQQSL 806
+ L+E L Y R Q++
Sbjct: 334 KNIPQPVRALLEGFLRYPKEDRLLPLQAM 362
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 84.6 bits (210), Expect = 5e-18
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 14/130 (10%)
Query: 358 LKKLSHANLVKLKEV-IRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
++ L+H N++ L + + + + YM +L Q IR + + + QV +
Sbjct: 76 MRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVAR 135
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTE--LVKIADFGLAREIRSRPYTDYVST-------R 466
G+ ++ F HRD+ N CM E VK+ADFGLAR+I R Y +
Sbjct: 136 GMEYLAEQKFVHRDLAARN--CMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK 193
Query: 467 WYRAPEVLLH 476
W A E L
Sbjct: 194 WT-ALESLQT 202
Score = 28.8 bits (65), Expect = 9.2
Identities = 10/45 (22%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 41 IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKLKEVIL--DPPL 82
IK + ++ LRE ++ L+H N++ L ++L +
Sbjct: 54 IKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLP 98
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 84.7 bits (210), Expect = 8e-18
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Query: 357 SLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQG 416
LK +V+ N ++ E M +L + +PE I+ M +++
Sbjct: 77 VLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKA 136
Query: 417 LAFMH-RHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTDYVSTRWYRAPEVL 474
L ++ +HG HRD+KP N+L +K+ DFG++ + + Y APE +
Sbjct: 137 LYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERI 196
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 83.8 bits (208), Expect = 9e-18
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 357 SLKKLSHANLVKLKEVIRENDTLYFVFEYM---KENLYQLIRDRDKFLPESIIRNMMYQV 413
S++ + V + ++ E M + Y+ + D+ + +PE I+ + +
Sbjct: 59 SMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 118
Query: 414 LQGLAFMH-RHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTDYVSTRWYRAP 471
++ L +H + HRD+KP N+L VK+ DFG++ + + Y AP
Sbjct: 119 VKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAP 178
Query: 472 EV 473
E
Sbjct: 179 ER 180
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 86.9 bits (215), Expect = 9e-18
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 8/127 (6%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRD-KFLPESIIRNMMYQVLQ 415
+KKL H LV+L V+ E + +Y V EYM K +L ++ K+L + +M Q+
Sbjct: 316 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 374
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST----RWYRAP 471
G+A++ R + HRD++ N+L + K+ADFGLAR I YT +W AP
Sbjct: 375 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT-AP 433
Query: 472 EVLLHST 478
E L+
Sbjct: 434 EAALYGR 440
Score = 34.1 bits (78), Expect = 0.22
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 41 IKMKRKYYSWEEAMNLREVKSLKKLSHANLVKLKEVILDPPL 82
IK + EA L+E + +KKL H LV+L V+ + P+
Sbjct: 296 IKTLKPGTMSPEAF-LQEAQVMKKLRHEKLVQLYAVVSEEPI 336
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 83.5 bits (207), Expect = 3e-17
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQ 412
++ L+ ++ LVKL+ ++N LY V EY+ E ++ +R +F E R Q
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE-MFSHLRRIGRF-SEPHARFYAAQ 149
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPE 472
++ ++H +RD+KPENLL +++ DFG A+ ++ R +T T APE
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-LCGTPEALAPE 208
Query: 473 VLL 475
++L
Sbjct: 209 IIL 211
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 83.2 bits (206), Expect = 3e-17
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Query: 357 SLKKLSHANLVKLKEVIRENDTLYFVFEYM---KENLYQLIRDRDKFLPESIIRNMMYQV 413
S++ + V + ++ E M + Y+ + D+ + +PE I+ + +
Sbjct: 103 SMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 162
Query: 414 LQGLAFMH-RHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTDYVSTRWYRAP 471
++ L +H + HRD+KP N+L VK+ DFG++ + S T + Y AP
Sbjct: 163 VKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAP 222
Query: 472 EV 473
E
Sbjct: 223 ER 224
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 82.4 bits (204), Expect = 4e-17
Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
L H +VKL + L+ + E+ + ++ + D+ L E I+ + Q+L+
Sbjct: 70 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA 129
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA---REIRSRPYTDYVSTRWYRAPEV 473
L F+H HRD+K N+L +++ADFG++ + + + ++ T ++ APEV
Sbjct: 130 LNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS-FIGTPYWMAPEV 188
Query: 474 LLHSTAYSAP 483
++ T P
Sbjct: 189 VMCETMKDTP 198
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 83.4 bits (206), Expect = 4e-17
Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 11/128 (8%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDR-DKFLPESIIRNMMYQVLQ 415
K +H N+V + ++ L+ V +M + LI + E I ++ VL+
Sbjct: 80 SKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLK 139
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLA---------REIRSRPYTDYVSTR 466
L ++H G+ HR +K ++L V ++ + + V
Sbjct: 140 ALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVL 199
Query: 467 WYRAPEVL 474
+ +PEVL
Sbjct: 200 PWLSPEVL 207
Score = 31.8 bits (72), Expect = 1.1
Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 4/74 (5%)
Query: 781 SPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKKL-NRLEKYRLKNARET 836
SP H +E L NP RP+A L+ K+ + L +L + ++
Sbjct: 307 SPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQS 366
Query: 837 LQAKKSKVDSFNLQ 850
NL+
Sbjct: 367 QDHSGIFGLVTNLE 380
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 82.4 bits (204), Expect = 5e-17
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 16/136 (11%)
Query: 358 LKKLSHANLVKLKEVIRENDT--LYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVL 414
L+ L H +++K K + L V EY+ +L + L + + Q+
Sbjct: 87 LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQ--LLLFAQQIC 144
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY--VST------R 466
+G+A++H + HRD+ N+L LVKI DFGLA+ + +Y V
Sbjct: 145 EGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH--EYYRVREDGDSPVF 202
Query: 467 WYRAPEVLLHSTAYSA 482
WY APE L Y A
Sbjct: 203 WY-APECLKEYKFYYA 217
Score = 30.8 bits (70), Expect = 2.4
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 56 LREVKSLKKLSHANLVKLKEVILDP 80
+E+ L+ L H +++K K D
Sbjct: 81 KQEIDILRTLYHEHIIKYKGCCEDA 105
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 81.9 bits (203), Expect = 5e-17
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 30/144 (20%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDR---------------DKFL 401
L L H ++VK V + D L VFEYMK +L + +R L
Sbjct: 71 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130
Query: 402 PESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE--LVKIADFGLAREIRSRPY 459
S + ++ Q+ G+ ++ F HRD+ N C+ LVKI DFG++R++ S Y
Sbjct: 131 GLSQMLHIASQIASGMVYLASQHFVHRDLATRN--CLVGANLLVKIGDFGMSRDVYSTDY 188
Query: 460 TDYVST-------RWYRAPEVLLH 476
Y RW PE +++
Sbjct: 189 --YRVGGHTMLPIRWM-PPESIMY 209
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 82.9 bits (205), Expect = 7e-17
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Query: 358 LKKLSHANLVKLKEVIRENDT-LYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + ++ V YMK +L IR+ + QV +
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 203
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST-------RWY 468
G+ F+ F HRD+ N + VK+ADFGLAR++ + + + +W
Sbjct: 204 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 263
Query: 469 RAPEVLLH 476
A E L
Sbjct: 264 -ALESLQT 270
Score = 29.3 bits (66), Expect = 6.8
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 6/55 (10%)
Query: 34 PNGPSIS--IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKLKEVILD---PPL 82
+G I +K + E L E +K SH N++ L + L PL
Sbjct: 113 NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 84.1 bits (208), Expect = 8e-17
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 13/127 (10%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+++ H ++VKL VI + ++ + E L ++ R L + + YQ+
Sbjct: 445 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 503
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST-------RWYR 469
LA++ F HRD+ N+L + VK+ DFGL+R + + Y +W
Sbjct: 504 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED---STYYKASKGKLPIKWM- 559
Query: 470 APEVLLH 476
APE +
Sbjct: 560 APESINF 566
Score = 32.1 bits (73), Expect = 0.95
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 34 PNGPSIS--IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKLKEVILDPPL 82
P P+++ IK + S L+E ++++ H ++VKL VI + P+
Sbjct: 414 PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV 465
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 84.1 bits (208), Expect = 9e-17
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQ 412
++ L+K++ +V L D L V M + + + PE+ +
Sbjct: 235 KQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAE 294
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD-YVSTRWYRAP 471
+ GL +HR +RD+KPEN+L ++I+D GLA + V T Y AP
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP 354
Query: 472 EVLL 475
EV+
Sbjct: 355 EVVK 358
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 83.8 bits (207), Expect = 9e-17
Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 11/127 (8%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+ +L + +V+L V + + L V E L++ + + + +P S + +++QV G
Sbjct: 390 MHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 448
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVST-------RWYR 469
+ ++ F HR++ N+L + KI+DFGL++ + + Y + +WY
Sbjct: 449 MKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY-YTARSAGKWPLKWY- 506
Query: 470 APEVLLH 476
APE +
Sbjct: 507 APECINF 513
Score = 31.8 bits (72), Expect = 1.3
Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 41 IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKLKEVILDPPL 82
IK+ ++ + +RE + + +L + +V+L V L
Sbjct: 368 IKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL 410
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 81.3 bits (201), Expect = 1e-16
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+++ ++VK +N L+ V EY ++ +IR R+K L E I ++ L+G
Sbjct: 78 MQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKG 137
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI---RSRPYTDYVSTRWYRAPEV 473
L ++H HRD+K N+L K+ADFG+A ++ ++ T + T ++ APEV
Sbjct: 138 LEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT-VIGTPFWMAPEV 196
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 80.4 bits (199), Expect = 2e-16
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 358 LKKLSHANLVKLKEVIREND-TLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQ 415
+K SH N++ L + ++ + V YMK +L IR+ + QV +
Sbjct: 80 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 139
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTE--LVKIADFGLAREIRSR-PYTDYVST------R 466
G+ ++ F HRD+ N CM E VK+ADFGLAR++ + Y+ + T +
Sbjct: 140 GMKYLASKKFVHRDLAARN--CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 197
Query: 467 WYRAPEVLLH 476
W A E L
Sbjct: 198 WM-ALESLQT 206
Score = 29.9 bits (68), Expect = 3.4
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 6/55 (10%)
Query: 34 PNGPSIS--IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKLKEVILD---PPL 82
+G I +K + E L E +K SH N++ L + L PL
Sbjct: 49 NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 80.7 bits (200), Expect = 2e-16
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQ 412
R + +L H VKL ++++ LYF Y K E L + + F E+ R +
Sbjct: 81 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SF-DETCTRFYTAE 138
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD----YVSTRWY 468
++ L ++H G HRD+KPEN+L ++I DFG A+ + +V T Y
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 198
Query: 469 RAPEVLL 475
+PE+L
Sbjct: 199 VSPELLT 205
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 81.0 bits (200), Expect = 2e-16
Identities = 32/137 (23%), Positives = 51/137 (37%), Gaps = 21/137 (15%)
Query: 357 SLKKLSHANLVKL----KEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMY 411
L H N++ + L+ V +Y +L+ + + + +
Sbjct: 89 QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLAL 146
Query: 412 QVLQGLAFMH--------RHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYV 463
GLA +H + HRD+K +N+L IAD GLA S T +
Sbjct: 147 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 206
Query: 464 S------TRWYRAPEVL 474
+ T+ Y APEVL
Sbjct: 207 APNHRVGTKRYMAPEVL 223
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 80.1 bits (198), Expect = 2e-16
Identities = 34/152 (22%), Positives = 53/152 (34%), Gaps = 21/152 (13%)
Query: 357 SLKKLSHANLVKL----KEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMY 411
+ L H N++ + L+ + Y + +LY ++ L ++
Sbjct: 55 NTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVL 112
Query: 412 QVLQGLAFMHRHGFF--------HRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYV 463
+ GLA +H F HRD+K +N+L IAD GLA V
Sbjct: 113 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV 172
Query: 464 S------TRWYRAPEVLLHSTAYSAPIHLSRS 489
T+ Y APEVL + R
Sbjct: 173 GNNPRVGTKRYMAPEVLDETIQVDCFDSYKRV 204
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 80.1 bits (198), Expect = 2e-16
Identities = 32/137 (23%), Positives = 51/137 (37%), Gaps = 21/137 (15%)
Query: 357 SLKKLSHANLVKL----KEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMY 411
L H N++ + L+ V +Y + +L+ + + + +
Sbjct: 50 QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLAL 107
Query: 412 QVLQGLAFMHRHGFF--------HRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYV 463
GLA +H HRD+K +N+L IAD GLA S T +
Sbjct: 108 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 167
Query: 464 S------TRWYRAPEVL 474
+ T+ Y APEVL
Sbjct: 168 APNHRVGTKRYMAPEVL 184
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 80.5 bits (199), Expect = 2e-16
Identities = 32/137 (23%), Positives = 52/137 (37%), Gaps = 21/137 (15%)
Query: 357 SLKKLSHANLVKL----KEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMY 411
+ H N++ + LY + +Y + +LY ++ L + + Y
Sbjct: 84 QTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAY 141
Query: 412 QVLQGLAFMHRHGFF--------HRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYV 463
+ GL +H F HRD+K +N+L IAD GLA + S +
Sbjct: 142 SSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDI 201
Query: 464 S------TRWYRAPEVL 474
T+ Y PEVL
Sbjct: 202 PPNTRVGTKRYMPPEVL 218
Score = 29.3 bits (66), Expect = 5.9
Identities = 9/35 (25%), Positives = 12/35 (34%)
Query: 770 RVPFTSIIPHASPDAIHLMESMLAYNPSKRPTAQQ 804
P LM A+NP+ R TA +
Sbjct: 287 SFPNRWSSDECLRQMGKLMTECWAHNPASRLTALR 321
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 80.1 bits (198), Expect = 2e-16
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 17/139 (12%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--------ENLYQLIRDRDKFLPESIIRNM 409
+ + H N+V D L+ V + + +++ + L ES I +
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 410 MYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTR--- 466
+ +VL+GL ++H++G HRD+K N+L V+IADFG++ + + R
Sbjct: 127 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 467 -----WYRAPEVLLHSTAY 480
W APEV+ Y
Sbjct: 187 VGTPCWM-APEVMEQVRGY 204
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 80.5 bits (199), Expect = 5e-16
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 338 ILSRHVSSRDEMVVCFY--RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQL 393
I+++ + V CF R L + +L ++ + LY V EY + L L
Sbjct: 93 IMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLL 152
Query: 394 IRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE 453
+ ++ P + R + +++ + +HR G+ HRD+KP+N+L +++ADFG +
Sbjct: 153 SKFGERI-PAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211
Query: 454 IRSRPYTD---YVSTRWYRAPEVLL 475
+R+ V T Y +PE+L
Sbjct: 212 LRADGTVRSLVAVGTPDYLSPEILQ 236
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 80.2 bits (198), Expect = 7e-16
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 338 ILSRHVSSRDEMVVCFY--RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQL 393
IL++ + CF R L + L ++++ LY V +Y + L L
Sbjct: 106 ILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLL 165
Query: 394 IRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE 453
+ D+ PE + R + +++ + +H+ + HRD+KP+N+L +++ADFG +
Sbjct: 166 SKFEDRL-PEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLK 224
Query: 454 IRS----RPYTDYVSTRWYRAPEVLL 475
+ + V T Y +PE+L
Sbjct: 225 LMEDGTVQSSV-AVGTPDYISPEILQ 249
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 80.6 bits (199), Expect = 8e-16
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYM-----KENLYQLIRDRDKFLPESIIRNM 409
+K L K+ +V L L V M + ++Y + D F E
Sbjct: 236 KKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF-QEPRAIFY 294
Query: 410 MYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI---RSRPYTDYVSTR 466
Q++ GL +H+ +RD+KPEN+L V+I+D GLA E+ +++ Y T
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTP 353
Query: 467 WYRAPEVLL 475
+ APE+LL
Sbjct: 354 GFMAPELLL 362
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 78.3 bits (194), Expect = 9e-16
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 19/130 (14%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMY- 411
R L ++H ++++ ++ ++ + +Y++ E L+ L+R +F P + + Y
Sbjct: 57 RLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGE-LFSLLRKSQRF-PNPVAK--FYA 112
Query: 412 -QVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT-----DYVST 465
+V L ++H +RD+KPEN+L +KI DFG A+ + YT DY+
Sbjct: 113 AEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYI-- 170
Query: 466 RWYRAPEVLL 475
APEV+
Sbjct: 171 ----APEVVS 176
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 78.7 bits (194), Expect = 1e-15
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 12/130 (9%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK----ENLYQLIRDRDKFLPESIIRNMMYQV 413
L + + +V + + E+M + + + + +PE I+ + V
Sbjct: 85 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAV 140
Query: 414 LQGLAFMH-RHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTDYVSTRWYRAP 471
++GL ++ +H HRD+KP N+L +K+ DFG++ + I S + +V TR Y +P
Sbjct: 141 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSP 199
Query: 472 EVLLHSTAYS 481
E L T YS
Sbjct: 200 ER-LQGTHYS 208
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 77.5 bits (191), Expect = 1e-15
Identities = 18/128 (14%), Positives = 40/128 (31%), Gaps = 8/128 (6%)
Query: 337 HILSRHVSSRDEMVVCFYR--KSLKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQL 393
+ D+++ L ++ + ++ +V+ V E+++ +L ++
Sbjct: 62 TFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEV 121
Query: 394 IRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE 453
P IR M + HR G P + V +A +
Sbjct: 122 ADTS--PSPVGAIR-AMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATMPD 178
Query: 454 IRSRPYTD 461
+ P D
Sbjct: 179 --ANPQDD 184
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 78.6 bits (194), Expect = 2e-15
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 338 ILSRHVSSRDEMVVCFY--RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMK-ENLYQLI 394
+LS+ + F+ R + + +V+L +++ LY V EYM +L L+
Sbjct: 101 LLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM 160
Query: 395 RDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI 454
+ D +PE R +V+ L +H GF HRD+KP+N+L + +K+ADFG ++
Sbjct: 161 SNYD--VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 218
Query: 455 RSRPYTD---YVSTRWYRAPEVLL 475
V T Y +PEVL
Sbjct: 219 NKEGMVRCDTAVGTPDYISPEVLK 242
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 79.5 bits (196), Expect = 2e-15
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 7/132 (5%)
Query: 355 RKSLKKLSHAN---LVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNM 409
R L +S + +V + D L F+ + M + Y L + F E+ +R
Sbjct: 240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-VF-SEADMRFY 297
Query: 410 MYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYR 469
+++ GL MH +RD+KP N+L V+I+D GLA + + V T Y
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYM 357
Query: 470 APEVLLHSTAYS 481
APEVL AY
Sbjct: 358 APEVLQKGVAYD 369
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 77.3 bits (191), Expect = 2e-15
Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 20/136 (14%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDR------DKFLPESIIRNMM 410
+ K +H N+V+ V ++ + + E M +L +R+ L + ++
Sbjct: 87 ISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 146
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLL--CMGTEL-VKIADFGLAREIRSRPYTDYVST-- 465
+ G ++ + F HRD+ N L C G KI DFG+AR+I Y Y
Sbjct: 147 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY--YRKGGC 204
Query: 466 -----RWYRAPEVLLH 476
+W PE +
Sbjct: 205 AMLPVKWM-PPEAFME 219
Score = 30.4 bits (69), Expect = 3.0
Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 41 IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKL 73
+K + S ++ ++ L E + K +H N+V+
Sbjct: 65 VKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 98
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 77.3 bits (191), Expect = 3e-15
Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 29/143 (20%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRN-------- 408
L L H ++V+ V E L VFEYM+ +L + +R
Sbjct: 97 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 156
Query: 409 ------MMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE--LVKIADFGLAREIRSRPYT 460
+ QV G+ ++ F HRD+ N C+ + +VKI DFG++R+I S Y
Sbjct: 157 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRN--CLVGQGLVVKIGDFGMSRDIYSTDY- 213
Query: 461 DYVST-------RWYRAPEVLLH 476
Y RW PE +L+
Sbjct: 214 -YRVGGRTMLPIRWM-PPESILY 234
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 77.4 bits (191), Expect = 3e-15
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 6/124 (4%)
Query: 357 SLKKLSHANLVKLKEVIRENDTLYFVFEYMK---ENLY-QLIRDRDKFLPESIIRNMMYQ 412
++ +V+ + + E M + Y + D +PE I+ +
Sbjct: 74 VMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLA 133
Query: 413 VLQGLAFMHR-HGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTDYVSTRWYRA 470
++ L + HRD+KP N+L + +K+ DFG++ + + S T R Y A
Sbjct: 134 TVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMA 193
Query: 471 PEVL 474
PE +
Sbjct: 194 PERI 197
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 76.1 bits (188), Expect = 4e-15
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 26/142 (18%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDR---------------DKFL 401
+L H N+V L V+ ++ L +F Y +L++ + R L
Sbjct: 66 RARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSAL 125
Query: 402 PESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD 461
+++ Q+ G+ ++ H H+D+ N+L VKI+D GL RE+ + Y
Sbjct: 126 EPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADY-- 183
Query: 462 YVST-------RWYRAPEVLLH 476
Y RW APE +++
Sbjct: 184 YKLLGNSLLPIRWM-APEAIMY 204
Score = 29.5 bits (67), Expect = 5.0
Identities = 8/34 (23%), Positives = 11/34 (32%), Gaps = 1/34 (2%)
Query: 41 IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKL 73
IK + E +L H N+V L
Sbjct: 44 IKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCL 77
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 76.2 bits (188), Expect = 5e-15
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 24/138 (17%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRN-------- 408
+K+ + ++V+L V+ + + E M +L +R + + +
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 409 -MMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE--LVKIADFGLAREIRSRPYTDYVST 465
M ++ G+A+++ + F HRD+ N CM E VKI DFG+ R+I Y Y
Sbjct: 142 QMAGEIADGMAYLNANKFVHRDLAARN--CMVAEDFTVKIGDFGMTRDIYETDY--YRKG 197
Query: 466 -------RWYRAPEVLLH 476
RW +PE L
Sbjct: 198 GKGLLPVRWM-SPESLKD 214
Score = 29.6 bits (67), Expect = 5.7
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 41 IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKL 73
IK + S E + L E +K+ + ++V+L
Sbjct: 60 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 93
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 76.7 bits (189), Expect = 5e-15
Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 20/136 (14%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDR------DKFLPESIIRNMM 410
+ K +H N+V+ V ++ + + E M +L +R+ L + ++
Sbjct: 128 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 187
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLL--CMGTEL-VKIADFGLAREIRSRPYTDYVST-- 465
+ G ++ + F HRD+ N L C G KI DFG+AR+I Y Y
Sbjct: 188 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY--YRKGGC 245
Query: 466 -----RWYRAPEVLLH 476
+W PE +
Sbjct: 246 AMLPVKWM-PPEAFME 260
Score = 29.7 bits (67), Expect = 5.5
Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 41 IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKL 73
+K + S ++ ++ L E + K +H N+V+
Sbjct: 106 VKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 139
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 77.0 bits (190), Expect = 6e-15
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQ 412
+ ++ L H LV L ++ + ++ V + + + Y L ++ F E ++ + +
Sbjct: 66 LQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNV-HF-KEETVKLFICE 123
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVS-TRWYRAP 471
++ L ++ HRDMKP+N+L V I DF +A + ++ T+ Y AP
Sbjct: 124 LVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAP 183
Query: 472 EVLLH 476
E+
Sbjct: 184 EMFSS 188
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 75.8 bits (187), Expect = 7e-15
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 25/139 (17%)
Query: 358 LKKLSHANLVKL-----KEVIRENDTLYFVFEYMKE-NLYQLIRDR-----DKFLPESII 406
+K SH N+++L + + + +MK +L+ + K +P +
Sbjct: 90 MKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL 149
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE--LVKIADFGLAREIRSRPYTDYVS 464
M + G+ ++ F HRD+ N CM + V +ADFGL+++I S Y Y
Sbjct: 150 LKFMVDIALGMEYLSNRNFLHRDLAARN--CMLRDDMTVCVADFGLSKKIYSGDY--YRQ 205
Query: 465 T-------RWYRAPEVLLH 476
+W A E L
Sbjct: 206 GRIAKMPVKWI-AIESLAD 223
Score = 29.2 bits (66), Expect = 6.1
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 41 IKM-KRKYYSWEEAMN-LREVKSLKKLSHANLVKLKEVILD 79
+K K S E L E +K SH N+++L V ++
Sbjct: 67 VKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 75.0 bits (185), Expect = 8e-15
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
+++ + N+V + D L+ V EY+ +L ++ + + E I + + LQ
Sbjct: 71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQA 128
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI---RSRPYTDYVSTRWYRAPEV 473
L F+H + HRD+K +N+L VK+ DFG +I +S+ T V T ++ APEV
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEV 187
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 75.0 bits (185), Expect = 9e-15
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
L + + K ++ L+ + EY+ + L+ L E+ I ++ ++L+G
Sbjct: 74 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKG 131
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI---RSRPYTDYVSTRWYRAPEV 473
L ++H HRD+K N+L VK+ADFG+A ++ + + T +V T ++ APEV
Sbjct: 132 LDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEV 190
Query: 474 LLHS 477
+ S
Sbjct: 191 IKQS 194
Score = 30.0 bits (68), Expect = 4.1
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 781 SPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKKLNRLEKYRLKNARE 835
S +E+ L PS RPTA++ L I R + L + ++R ++++ + + +
Sbjct: 244 SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKAEQSHD 301
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 75.1 bits (185), Expect = 1e-14
Identities = 34/140 (24%), Positives = 53/140 (37%), Gaps = 26/140 (18%)
Query: 358 LKKLSHANLVKL------KEVIRENDTLYFVFEYMKE-NLYQLIRDR-----DKFLPESI 405
+K+ H ++ KL + +MK +L+ + LP
Sbjct: 79 MKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQT 138
Query: 406 IRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE--LVKIADFGLAREIRSRPYTDYV 463
+ M + G+ ++ F HRD+ N CM E V +ADFGL+R+I S Y Y
Sbjct: 139 LVRFMVDIACGMEYLSSRNFIHRDLAARN--CMLAEDMTVCVADFGLSRKIYSGDY--YR 194
Query: 464 ST-------RWYRAPEVLLH 476
+W A E L
Sbjct: 195 QGCASKLPVKWL-ALESLAD 213
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 75.1 bits (185), Expect = 1e-14
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 21/146 (14%)
Query: 357 SLKKLSHANLVKL----KEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPESIIRNMMY 411
SL + H N+++ K + L+ + + K +L ++ + + + ++
Sbjct: 71 SLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAE 128
Query: 412 QVLQGLAFMHRHGFF----------HRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD 461
+ +GLA++H HRD+K +N+L IADFGLA + +
Sbjct: 129 TMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAG 188
Query: 462 Y----VSTRWYRAPEVLLHSTAYSAP 483
V TR Y APEVL + +
Sbjct: 189 DTHGQVGTRRYMAPEVLEGAINFQRD 214
Score = 28.9 bits (65), Expect = 8.8
Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 32 AVPNGPSISIKM--KRKYYSWEEAMNLREVKSLKKLSHANLVKL 73
A +++K+ + SW+ N EV SL + H N+++
Sbjct: 43 AQLLNEYVAVKIFPIQDKQSWQ---NEYEVYSLPGMKHENILQF 83
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 74.3 bits (183), Expect = 2e-14
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 358 LKKLS-HANLVKL------KEVIRENDTLYFVFEYMK----ENLYQLIRDRDKFLPESII 406
LKK S H N+ K +D L+ V E+ +L + + L E I
Sbjct: 74 LKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG--NTLKEEWI 131
Query: 407 RNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI---RSRPYTDYV 463
+ ++L+GL+ +H+H HRD+K +N+L VK+ DFG++ ++ R T ++
Sbjct: 132 AYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT-FI 190
Query: 464 STRWYRAPEVLLHSTAYSAP 483
T ++ APEV+ A
Sbjct: 191 GTPYWMAPEVIACDENPDAT 210
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 74.2 bits (183), Expect = 2e-14
Identities = 35/141 (24%), Positives = 53/141 (37%), Gaps = 25/141 (17%)
Query: 358 LKKL-SHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRN------- 408
+ L H N+V L + + EY +L +R + + L
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 409 ------MMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDY 462
QV QG+AF+ HRD+ N+L + KI DFGLAR+I + Y
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--Y 220
Query: 463 VST-------RWYRAPEVLLH 476
+ +W APE +
Sbjct: 221 IVKGNARLPVKWM-APESIFD 240
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 73.6 bits (181), Expect = 4e-14
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQVLQG 416
++ H N+V++ + + L+ + E+++ L ++ L E I + VLQ
Sbjct: 96 MRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR--LNEEQIATVCEAVLQA 153
Query: 417 LAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREI---RSRPYTDYVSTRWYRAPEV 473
LA++H G HRD+K +++L VK++DFG +I + + V T ++ APEV
Sbjct: 154 LAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS-LVGTPYWMAPEV 212
Query: 474 L 474
+
Sbjct: 213 I 213
Score = 29.3 bits (66), Expect = 5.5
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Query: 781 SPDAIHLMESMLAYNPSKRPTAQQSLS---IKREVSLSFVLLKKLNRLEKYRLKNA 833
SP +E ML +P +R TAQ+ L + + L L ++ YR + +
Sbjct: 268 SPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPEC--LVPL--IQLYRKQTS 319
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 73.0 bits (179), Expect = 6e-14
Identities = 29/143 (20%), Positives = 48/143 (33%), Gaps = 27/143 (18%)
Query: 357 SLKKLSHANLVKL-----KEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMM 410
+ + H N+ + + V EY +L + + +
Sbjct: 60 RVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLA 117
Query: 411 YQVLQGLAFMH---------RHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD 461
+ V +GLA++H + HRD+ N+L I+DFGL+ +
Sbjct: 118 HSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVR 177
Query: 462 Y----------VSTRWYRAPEVL 474
V T Y APEVL
Sbjct: 178 PGEEDNAAISEVGTIRYMAPEVL 200
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 73.1 bits (180), Expect = 8e-14
Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 38/152 (25%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDR------------------- 397
+ + + N+VKL V + +FEYM +L + +R
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 398 ----DKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE--LVKIADFGLA 451
L + + QV G+A++ F HRD+ N C+ E +VKIADFGL+
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRN--CLVGENMVVKIADFGLS 221
Query: 452 REIRSRPYTDYVST-------RWYRAPEVLLH 476
R I S Y Y + RW PE + +
Sbjct: 222 RNIYSADY--YKADGNDAIPIRWM-PPESIFY 250
Score = 30.4 bits (69), Expect = 3.0
Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 41 IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKL 73
+KM ++ S + + RE + + + N+VKL
Sbjct: 82 VKMLKEEASADMQADFQREAALMAEFDNPNIVKL 115
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 71.9 bits (177), Expect = 1e-13
Identities = 33/152 (21%), Positives = 59/152 (38%), Gaps = 38/152 (25%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK------------------------ENLYQL 393
LK+++H +++KL ++ L + EY K N L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 394 IRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE--LVKIADFGLA 451
++ L + + +Q+ QG+ ++ HRD+ N + E +KI+DFGL+
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARN--ILVAEGRKMKISDFGLS 197
Query: 452 REIRSRPYTDYVST-------RWYRAPEVLLH 476
R++ YV +W A E L
Sbjct: 198 RDVYEEDS--YVKRSQGRIPVKWM-AIESLFD 226
Score = 29.1 bits (66), Expect = 6.4
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 41 IKMKRKYYSWEEAMN-LREVKSLKKLSHANLVKL 73
+KM ++ S E + L E LK+++H +++KL
Sbjct: 58 VKMLKENASPSELRDLLSEFNVLKQVNHPHVIKL 91
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 69.2 bits (170), Expect = 9e-13
Identities = 38/152 (25%), Positives = 59/152 (38%), Gaps = 31/152 (20%)
Query: 358 LKKL-SHANLVKLKEVIRENDTLYFVFEYMK------------------ENLYQLIRDRD 398
L L +H N+V L + EY + ++ D +
Sbjct: 80 LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139
Query: 399 KFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRP 458
L + + YQV +G+AF+ HRD+ N+L + KI DFGLAR+I++
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 459 YTDYVST-------RWYRAPEVLLHS--TAYS 481
YV +W APE + + T S
Sbjct: 200 N--YVVKGNARLPVKWM-APESIFNCVYTFES 228
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 70.1 bits (172), Expect = 9e-13
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 27/143 (18%)
Query: 358 LKKL-SHANLVKLKEVIRENDTLYFVFEYMK----------------ENLYQLIRDRDKF 400
+K + H N++ L ++ LY + EY E Y + ++
Sbjct: 128 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 187
Query: 401 LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT 460
L + + YQV +G+ ++ HRD+ N+L ++KIADFGLAR+I Y
Sbjct: 188 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY- 246
Query: 461 DYVST-------RWYRAPEVLLH 476
Y T +W APE L
Sbjct: 247 -YKKTTNGRLPVKWM-APEALFD 267
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 69.6 bits (171), Expect = 1e-12
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQ 412
+ L+ H L LK + +D L FV EY E + L R+R F E R +
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VF-TEERARFYGAE 113
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTD-YVSTRWYRA 470
++ L ++H +RD+K ENL+ +KI DFGL +E I + T Y A
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 173
Query: 471 PEVLL 475
PEVL
Sbjct: 174 PEVLE 178
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 68.9 bits (169), Expect = 2e-12
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 31/145 (21%)
Query: 358 LKKL-SHANLVKLKEVIRENDTLYFVFEYMK----------------ENLYQLIRDRDKF 400
+K + H N++ L ++ LY + EY E Y + R ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 401 LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE--LVKIADFGLAREIRSRP 458
+ + + YQ+ +G+ ++ HRD+ N + TE ++KIADFGLAR+I +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN--VLVTENNVMKIADFGLARDINNID 211
Query: 459 YTDYVST-------RWYRAPEVLLH 476
Y Y T +W APE L
Sbjct: 212 Y--YKKTTNGRLPVKWM-APEALFD 233
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 69.2 bits (169), Expect = 2e-12
Identities = 40/155 (25%), Positives = 59/155 (38%), Gaps = 53/155 (34%)
Query: 381 FVFEYMKENLYQLIRD-RDKFLPESIIRNMMYQVLQGLAFMHRH-GFFHRDMKPENLLCM 438
VFE + +L + I + LP ++ ++ QVLQGL ++H H D+KPEN+L
Sbjct: 122 MVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLS 181
Query: 439 GTE-------------------------------------------------LVKIADFG 449
E VKIAD G
Sbjct: 182 VNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLG 241
Query: 450 LAREIRSRPYTDYVSTRWYRAPEVLLHSTAYSAPI 484
A + +T+ + TR YR+ EVL+ S Y+ P
Sbjct: 242 NAC-WVHKHFTEDIQTRQYRSLEVLIGS-GYNTPA 274
Score = 32.6 bits (74), Expect = 0.64
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 785 IHLMESMLAYNPSKRPTAQQSL 806
+ ML P KR TA + L
Sbjct: 369 TDFLLPMLELIPEKRATAAECL 390
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 68.4 bits (168), Expect = 2e-12
Identities = 36/146 (24%), Positives = 53/146 (36%), Gaps = 32/146 (21%)
Query: 358 LKKL-SHANLVKLKEV-IRENDTLYFVFEYMK----------------ENLYQLIRDRDK 399
L + H N+V L + L + E+ K
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 400 FLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE--LVKIADFGLAREIRSR 457
FL + +QV +G+ F+ HRD+ N + +E +VKI DFGLAR+I
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN--ILLSEKNVVKICDFGLARDIYKD 201
Query: 458 PYTDYVST-------RWYRAPEVLLH 476
P YV +W APE +
Sbjct: 202 PD--YVRKGDARLPLKWM-APETIFD 224
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 68.2 bits (167), Expect = 4e-12
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 31/145 (21%)
Query: 358 LKKL-SHANLVKLKEVIRENDTLYFVFEYMK----------------ENLYQLIRDRDKF 400
+K + H N++ L ++ LY + EY E Y + R ++
Sbjct: 140 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 401 LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE--LVKIADFGLAREIRSRP 458
+ + + YQ+ +G+ ++ HRD+ N + TE ++KIADFGLAR+I +
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN--VLVTENNVMKIADFGLARDINNID 257
Query: 459 YTDYVST-------RWYRAPEVLLH 476
Y Y T +W APE L
Sbjct: 258 Y--YKKTTNGRLPVKWM-APEALFD 279
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 68.6 bits (168), Expect = 4e-12
Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQ 412
+ L+ H L LK + +D L FV EY E + L R+R F E R +
Sbjct: 199 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VF-SEDRARFYGAE 256
Query: 413 VLQGLAFMH-RHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTD-YVSTRWYR 469
++ L ++H +RD+K ENL+ +KI DFGL +E I+ + T Y
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 316
Query: 470 APEVLL 475
APEVL
Sbjct: 317 APEVLE 322
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 67.2 bits (165), Expect = 5e-12
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQ 412
R L+++ H +V L + LY + EY+ E QL R+ F E + +
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG-IF-MEDTACFYLAE 129
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTD-YVSTRWYRA 470
+ L +H+ G +RD+KPEN++ VK+ DFGL +E I T + T Y A
Sbjct: 130 ISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMA 189
Query: 471 PEVLL 475
PE+L+
Sbjct: 190 PEILM 194
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 66.0 bits (162), Expect = 1e-11
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Query: 355 RKSLKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQ 412
R L +++H +VKL + LY + ++++ + +L ++ F E ++ + +
Sbjct: 77 RDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MF-TEEDVKFYLAE 134
Query: 413 VLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTD-YVSTRWYRA 470
+ L +H G +RD+KPEN+L +K+ DFGL++E I + T Y A
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 471 PEVLL 475
PEV+
Sbjct: 195 PEVVN 199
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 65.0 bits (159), Expect = 4e-11
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 18/146 (12%)
Query: 342 HVSSRDEMVVCFY--RKSLKKLSHAN-LVKLKEVIRENDTLYFVFEYMK--ENLYQLIRD 396
+ + + R+ L+ + + LV L + L+ + +Y+ E L +
Sbjct: 94 TIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR 153
Query: 397 RDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRS 456
+F E ++ + +++ L +H+ G +RD+K EN+L V + DFGL++E
Sbjct: 154 E-RF-TEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE--- 208
Query: 457 RPYTDYVSTRW-------YRAPEVLL 475
D + Y AP+++
Sbjct: 209 -FVADETERAYDFCGTIEYMAPDIVR 233
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 64.6 bits (158), Expect = 4e-11
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 362 SHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
+H LV L + L+FV EY+ + ++ + R R K PE R ++ L +
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR-KL-PEEHARFYSAEISLALNY 125
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTD-YVSTRWYRAPEVLL 475
+H G +RD+K +N+L +K+ D+G+ +E +R T + T Y APE+L
Sbjct: 126 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILR 183
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 65.4 bits (159), Expect = 5e-11
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Query: 362 SHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L +L + D LYFV EY+ + +Y + + +F E ++ GL F
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-RF-KEPHAVFYAAEIAIGLFF 457
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLARE---IRSRPYTDYVSTRWYRAPEVLL 475
+ G +RD+K +N++ +KIADFG+ +E T + T Y APE++
Sbjct: 458 LQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT-FCGTPDYIAPEIIA 515
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 64.2 bits (157), Expect = 5e-11
Identities = 44/159 (27%), Positives = 62/159 (38%), Gaps = 40/159 (25%)
Query: 358 LKKL-SHANLVKLKEVIRENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIR-------- 407
+ +L SH N+V L + +Y +FEY +L +R + + E I
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 161
Query: 408 --------------NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE--LVKIADFGLA 451
YQV +G+ F+ HRD+ N + T +VKI DFGLA
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN--VLVTHGKVVKICDFGLA 219
Query: 452 REIRSRPYTDYVST-------RWYRAPEVLLHS--TAYS 481
R+I S YV +W APE L T S
Sbjct: 220 RDIMSDSN--YVVRGNARLPVKWM-APESLFEGIYTIKS 255
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 64.2 bits (157), Expect = 6e-11
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMY--QV 413
LK + H LV L + D LYFV +Y+ E Y L R+R F E R Y ++
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER-CF-LEP--RARFYAAEI 148
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE---IRSRPYTDYVSTRWYRA 470
L ++H +RD+KPEN+L + + DFGL +E S T + T Y A
Sbjct: 149 ASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST-FCGTPEYLA 207
Query: 471 PEVLL 475
PEVL
Sbjct: 208 PEVLH 212
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 64.2 bits (157), Expect = 7e-11
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 362 SHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
+H L +L + D L+FV E++ + ++ + + R +F E+ R +++ L F
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR-RF-DEARARFYAAEIISALMF 139
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTD-YVSTRWYRAPEVLL 475
+H G +RD+K +N+L K+ADFG+ +E I + T + T Y APE+L
Sbjct: 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQ 197
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 63.8 bits (156), Expect = 9e-11
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 362 SHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
L +L + D LYFV EY+ + +Y + + +F E ++ GL F
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-RF-KEPHAVFYAAEIAIGLFF 136
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTD-YVSTRWYRAPEVLL 475
+ G +RD+K +N++ +KIADFG+ +E I T + T Y APE++
Sbjct: 137 LQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIA 194
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 63.9 bits (156), Expect = 9e-11
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 362 SHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQGLAF 419
+H LV L + L+FV EY+ + ++ + R R K PE R ++ L +
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR-KL-PEEHARFYSAEISLALNY 168
Query: 420 MHRHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTD-YVSTRWYRAPEVLL 475
+H G +RD+K +N+L +K+ D+G+ +E +R T + T Y APE+L
Sbjct: 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILR 226
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 63.4 bits (155), Expect = 1e-10
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYMK--ENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
H L + + + L+FV EY+ + +Y + KF S +++
Sbjct: 72 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-KF-DLSRATFYAAEIIL 129
Query: 416 GLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLARE-IRSRPYTD-YVSTRWYRAPEV 473
GL F+H G +RD+K +N+L +KIADFG+ +E + T+ + T Y APE+
Sbjct: 130 GLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEI 189
Query: 474 LL 475
LL
Sbjct: 190 LL 191
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 63.1 bits (154), Expect = 1e-10
Identities = 35/145 (24%), Positives = 53/145 (36%), Gaps = 32/145 (22%)
Query: 358 LKKL-SHANLVKLKEVIRENDTLYFVFEYMK----------------ENLYQLIRDRDKF 400
L KL H N++ L LY EY + + +
Sbjct: 79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 401 LPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYT 460
L + + V +G+ ++ + F HRD+ N+L + KIADFGL+R
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG------Q 192
Query: 461 D-YVST-------RWYRAPEVLLHS 477
+ YV RW A E L +S
Sbjct: 193 EVYVKKTMGRLPVRWM-AIESLNYS 216
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 61.0 bits (149), Expect = 4e-10
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 19/128 (14%)
Query: 358 LKKLSHANLVKLKEVIRENDTLYFVFEYM-KENLYQLIRDRDKFLPES------IIRNMM 410
+ K H NLV+L + D L V+ YM +L + D P S I +
Sbjct: 84 MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQG-- 141
Query: 411 YQVLQGLAFMHRHGFFHRDMKPENLLCMGTELV-KIADFGLAREIRSRPYTDYVSTRW-- 467
G+ F+H + HRD+K N+L + KI+DFGLAR T +++R
Sbjct: 142 --AANGINFLHENHHIHRDIKSANIL-LDEAFTAKISDFGLARASEKFAQT-VMTSRIVG 197
Query: 468 ---YRAPE 472
Y APE
Sbjct: 198 TTAYMAPE 205
Score = 29.1 bits (66), Expect = 6.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 56 LREVKSLKKLSHANLVKL 73
+E+K + K H NLV+L
Sbjct: 78 DQEIKVMAKCQHENLVEL 95
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 60.5 bits (147), Expect = 6e-10
Identities = 39/148 (26%), Positives = 59/148 (39%), Gaps = 24/148 (16%)
Query: 356 KSLKKLSHANLV-KLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVL 414
K K + + ++ E D V E + +L L + + + Q++
Sbjct: 56 KIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMI 115
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTE----LVKIADFGLAREIRS------RPYTDYVS 464
+ ++H F HRD+KP+N L MG LV I DFGLA++ R PY + +
Sbjct: 116 SRIEYIHSKNFIHRDVKPDNFL-MGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKN 174
Query: 465 TRWYRAPEVLLHSTAYSAPI--HLSRSQ 490
L TA A I HL Q
Sbjct: 175 ----------LTGTARYASINTHLGIEQ 192
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 60.5 bits (147), Expect = 9e-10
Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 374 RENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPE 433
+ + V E + +L ++ F ++++ + ++L L ++H + + H D+K
Sbjct: 122 KGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQ-LGIRMLDVLEYIHENEYVHGDIKAA 180
Query: 434 NLLCMGTE---LVKIADFGLAREIR 455
NLL +G + V +AD+GL+
Sbjct: 181 NLL-LGYKNPDQVYLADYGLSYRYC 204
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 59.9 bits (145), Expect = 2e-09
Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 12/106 (11%)
Query: 385 YMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVK 444
E FL + +QV +G+ F+ HRD+ N+L +VK
Sbjct: 174 SDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVK 233
Query: 445 IADFGLAREIRSRPYTDYVST-------RWYRAPEVLLHS--TAYS 481
I DFGLAR+I P YV +W APE + T S
Sbjct: 234 ICDFGLARDIYKDPD--YVRKGDARLPLKWM-APETIFDRVYTIQS 276
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 59.8 bits (145), Expect = 2e-09
Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 380 YFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMG 439
+ + + +L ++ K + + ++L L ++H H + H D+K NLL +
Sbjct: 128 FMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLL-LN 186
Query: 440 TE---LVKIADFGLAREIR 455
+ V + D+GLA
Sbjct: 187 YKNPDQVYLVDYGLAYRYC 205
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 58.5 bits (142), Expect = 3e-09
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 374 RENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPE 433
V E + +L L D+ + + Q++ + ++H +RD+KPE
Sbjct: 75 PCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPE 134
Query: 434 NLLCMGTE------LVKIADFGLAREIR 455
N L +G ++ I DF LA+E
Sbjct: 135 NFL-IGRPGNKTQQVIHIIDFALAKEYI 161
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 58.2 bits (141), Expect = 5e-09
Identities = 21/119 (17%), Positives = 45/119 (37%), Gaps = 17/119 (14%)
Query: 353 FYRKSLKKLSHANLVKLKEV------------IRENDTLYFVFEYMKENLYQLIRDRD-K 399
F++++ K L KL + ++ + V + +L +
Sbjct: 95 FFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKH 154
Query: 400 FLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTE---LVKIADFGLAREIR 455
L E + + ++L L F+H + + H ++ EN+ + E V +A +G A
Sbjct: 155 VLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIF-VDPEDQSQVTLAGYGFAFRYC 212
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 57.8 bits (140), Expect = 5e-09
Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 374 RENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHGFFHRDMKPE 433
+E V + + +L L+ + + Q+L + +H +RD+KP+
Sbjct: 76 QEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPD 135
Query: 434 NLLCMGTE------LVKIADFGLAREIR 455
N L +G ++ + DFG+ + R
Sbjct: 136 NFL-IGRPNSKNANMIYVVDFGMVKFYR 162
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 58.0 bits (139), Expect = 6e-09
Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 2/109 (1%)
Query: 373 IRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMH-RHGFFHRDMK 431
++D L+ V E+ L + R K + +++++Q+ LA F HRD+
Sbjct: 131 FFKDDQLFIVLEFE-FGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLH 189
Query: 432 PENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAY 480
N+L T L K+ + VS Y +
Sbjct: 190 WGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVV 238
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 57.2 bits (139), Expect = 8e-09
Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 38/138 (27%)
Query: 358 LKKLSHANLVKLKEVI---RENDTLYFVFEYMKE-NLYQLIRDRDKFLPESIIRNMMYQV 413
L H +LV L I E + + +++YM+ NL + + D
Sbjct: 89 LSFCRHPHLVSL---IGFCDERNEMILIYKYMENGNLKRHLYGSDL----------PTMS 135
Query: 414 L-------------QGLAFMHRHGFFHRDMKPENLLCMGTELV-KIADFGLAREIRSRPY 459
+ +GL ++H HRD+K N+L + V KI DFG++++
Sbjct: 136 MSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINIL-LDENFVPKITDFGISKKGTELDQ 194
Query: 460 TDYVSTRW-----YRAPE 472
T ++ST Y PE
Sbjct: 195 T-HLSTVVKGTLGYIDPE 211
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 53.7 bits (130), Expect = 1e-07
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 28/129 (21%)
Query: 363 HANLVKLKEVIRENDTLYFVFEYMKEN--LYQLIRDRDKFLPE-------SIIRNMMYQV 413
H NL++L+ V+ YM N + +R+R + P I
Sbjct: 86 HRNLLRLRGFCMTPTERLLVYPYM-ANGSVASCLRERPESQPPLDWPKRQRIALG----S 140
Query: 414 LQGLAFMHRHG---FFHRDMKPENLLCMGTEL-VKIADFGLAREIRSRPYTD-YVSTRW- 467
+GLA++H H HRD+K N+L + E + DFGLA+ + Y D +V+T
Sbjct: 141 ARGLAYLHDHCDPKIIHRDVKAANIL-LDEEFEAVVGDFGLAKLM---DYKDTHVTTAVR 196
Query: 468 ----YRAPE 472
+ APE
Sbjct: 197 GTIGHIAPE 205
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 54.2 bits (130), Expect = 1e-07
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 24/148 (16%)
Query: 356 KSLKKLSHANLV-KLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVL 414
K + L + ++ E D V + + +L L + L + + Q++
Sbjct: 54 KIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMI 113
Query: 415 QGLAFMHRHGFFHRDMKPENLLCMGTE----LVKIADFGLAREIRS------RPYTDYVS 464
+ F+H F HRD+KP+N L MG V I DFGLA++ R PY + +
Sbjct: 114 NRVEFVHSKSFLHRDIKPDNFL-MGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKN 172
Query: 465 TRWYRAPEVLLHSTAYSAPI--HLSRSQ 490
L TA A + HL Q
Sbjct: 173 ----------LTGTARYASVNTHLGIEQ 190
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 54.9 bits (131), Expect = 1e-07
Identities = 109/681 (16%), Positives = 203/681 (29%), Gaps = 198/681 (29%)
Query: 312 TERLKFSY--ILPHTLPLYTCNLD----QD-----------NHIL-SRHVSSR------- 346
T ++ Y IL + N D QD +HI+ S+ S
Sbjct: 11 TGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWT 70
Query: 347 -----DEMVVCFYRKSLKKLSHANLV-KLKEVIRENDTLYFVFEYMKENLYQLIRDRDKF 400
+EMV F + L+ ++ L+ +K R+ + ++ ++ LY D F
Sbjct: 71 LLSKQEEMVQKFVEEVLRI-NYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY---NDNQVF 126
Query: 401 LPESIIRNMMYQVLQ-GLAFMHRHGFFHRDMKPENLLC---MG----TELVKIA--DFGL 450
++ R Y L+ L +++P + + T + + +
Sbjct: 127 AKYNVSRLQPYLKLRQAL----------LELRPAKNVLIDGVLGSGKTWVALDVCLSYKV 176
Query: 451 AREIRSRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQQFLFYSIDHVPPIQTTCLLA 510
++ + + +++ + +PE +L Q L Y ID P + +
Sbjct: 177 QCKMDFKIF--WLNLKNCNSPETVL------------EMLQKLLYQID--PNWTSRSDHS 220
Query: 511 GTERLKSSYILLHTLPLYTYHVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQT- 569
+L+ I L CLL +LL+ +
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYE---NCLL----------VLLNV-----QNAKAWNAF 262
Query: 570 --TC--LLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLLAGTERLK--SSYILL--HTL 621
+C LL T R K + T H+ + L E Y+ L
Sbjct: 263 NLSCKILL--TTRFKQ--VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL 318
Query: 622 PLYTYHVPPIQTTCLLAGTERLKSSYILLHTLPLYTY-HVPPIQTTCL--LAGTERLKSS 678
P P + ++A E ++ + I + L L E +
Sbjct: 319 PREVLTTNP-RRLSIIA--ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE-YRKM 374
Query: 679 YILLHTLPLYTYHVP-PIQTTCLL-AGTERLKSSYIL--LHTLPL-------YTYHVPPI 727
+ L P P L+ + ++ LH L T +P I
Sbjct: 375 FDRLSVFP---PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI 431
Query: 728 QTTCLLAGTERLKSSYILLHTLPLYTCYTLASNMNFKFPQFRRVP------FTSIIPHAS 781
L E + LH + Y N+ F +P F S I H
Sbjct: 432 YLE-LKVKLENEYA----LHRS-IVDHY----NIPKTFDSDDLIPPYLDQYFYSHIGH-- 479
Query: 782 PDAIHLMESMLAYNPSKRPTAQQSLSIKREVSLSFVLLKK------------------LN 823
HL + +++ R V L F L++ L
Sbjct: 480 ----HLKNIEHP----------ERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQ 525
Query: 824 RLEKYRLKNARETLQAKKSKVDSFNLQLQNLKYE--IFHLKKEVVKCLQFKSKDEDIDLV 881
+L+ Y+ + + + KYE + + + K + + DL+
Sbjct: 526 QLKFYK----------------PY-ICDNDPKYERLVNAILDFLPKIEENLICSKYTDLL 568
Query: 882 ------DEETFFKDAPESISR 896
++E F++A + + R
Sbjct: 569 RIALMAEDEAIFEEAHKQVQR 589
Score = 49.1 bits (116), Expect = 8e-06
Identities = 90/585 (15%), Positives = 160/585 (27%), Gaps = 160/585 (27%)
Query: 218 PNNISQNANNTQNNPNNSHYN--PNNIQNNPNNFSQNNISQNNTNNTQINKTTQYNPPPY 275
+ Q N Y + I+ S Q ++ N
Sbjct: 75 QEEMVQKFVEEVLRIN---YKFLMSPIKTEQRQPSMMTRMYI----EQRDRLYNDNQVFA 127
Query: 276 PININKENTPAWLTNSATDGDTTWFPTGHTTCLLAGTERLK-FSYILPH--------TLP 326
N+++ L LL L+ +L +
Sbjct: 128 KYNVSRLQPYLKLRQ----------------ALL----ELRPAKNVLIDGVLGSGKTWVA 167
Query: 327 LYTCN-----LDQDNHI--LS-RHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDT 378
L C D I L+ ++ +S + ++ + L+KL + +
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL-----EMLQKLLYQIDPNWTSRSDHSSN 222
Query: 379 LYFVFEYMKENLYQLIRDRDKFLPES--IIRNMMY-QVLQGLAFMHRHGFFHRDMKPENL 435
+ ++ L +L++ + ++ N+ + AF NL
Sbjct: 223 IKLRIHSIQAELRRLLKSKP--YENCLLVLLNVQNAKAWN--AF--------------NL 264
Query: 436 LC---MGTELVKIADFGLAR-------EIRSRPYTD---------YVSTRWYRAP-EVLL 475
C + T ++ DF A + S T Y+ R P EVL
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT 324
Query: 476 HSTAYSAPIHLS-----------RSQQFLFYSIDHVPPIQTTCL--LAGTERLKSSYILL 522
+ P LS + + D + I + L L E + + L
Sbjct: 325 TN-----PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE-YRKMFDRL 378
Query: 523 HTLPLYTYHVP-PIQTTCLL-AGTERLKSSYIL--LHTLPL-------YTYHVPPIQTTC 571
P P L+ + ++ LH L T +P I
Sbjct: 379 SVFP---PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLE- 434
Query: 572 LLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPI 631
L E + LH + Y++P +T Y H +H
Sbjct: 435 LKVKLENEYA----LHRSIVDHYNIP--KTFDSDDLIPPYLDQYFYSH----IGHH---- 480
Query: 632 QTTCLLAGTERLKSSYILLHTLPL-YTYHVPPIQTTCLLAGTERLKSSYIL--LHTLPLY 688
L E + L + L + + ++ T S IL L L Y
Sbjct: 481 -----LKNIEHPE-RMTLFRMVFLDFRF----LEQKIRHDSTAWNASGSILNTLQQLKFY 530
Query: 689 TYHVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLL 733
++ ERL ++ +L LP ++ + T LL
Sbjct: 531 KPYICDNDPK-----YERLVNA--ILDFLPKIEENLICSKYTDLL 568
Score = 34.4 bits (78), Expect = 0.21
Identities = 22/159 (13%), Positives = 45/159 (28%), Gaps = 36/159 (22%)
Query: 53 AMNLREVKS-LKKLSHANLVKLKEVI------LDPPLH-AYFQ--------VGGPTTRVT 96
A ++R+ + H N KL +I L+P + F PT ++
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLS 393
Query: 97 SLKREAASEHISARSIYPTVKNTLTLNVLPQPVTLYSHDYDILLSNPANSMLANNSMVST 156
+ + + + + P+ T+ + L + A + +
Sbjct: 394 LIWFDVIKS--DVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSI-- 449
Query: 157 NNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQY 195
+ YN P +D + QY
Sbjct: 450 ----------------VDHYNIPKTFDSDDLIPPYLDQY 472
Score = 32.1 bits (72), Expect = 1.1
Identities = 17/84 (20%), Positives = 35/84 (41%), Gaps = 20/84 (23%)
Query: 860 HLKKEVVKCLQFKSKDEDIDLVDEETFFKDAP----ESISRPEVTKED-------PHQL- 907
H+ E + Q++ KD I V E+ F + + + + ++KE+ +
Sbjct: 6 HMDFETGE-HQYQYKD--ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVS 62
Query: 908 KLARLEWELKQRKELADECSLVER 931
RL W L ++E +V++
Sbjct: 63 GTLRLFWTLLSKQE-----EMVQK 81
Score = 29.4 bits (65), Expect = 7.2
Identities = 37/239 (15%), Positives = 72/239 (30%), Gaps = 79/239 (33%)
Query: 788 MESMLAYN------PSKRPTAQQSLSIKREVSLSFVL------LKKLN--RLEKYRLKNA 833
+E +L N P K Q S+ + + L K N RL+ Y
Sbjct: 83 VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY--LKL 140
Query: 834 RETLQAKKSKVDSFNLQLQNLKYEIFH--------------LKKEVVKC--------LQF 871
R+ L +L+ K + V+C L
Sbjct: 141 RQALL-----------ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNL 189
Query: 872 KSKDEDIDLVD--EETFFKDAPESISRPEVTKEDPHQL-----KLARLEWELKQRKE--- 921
K+ + +++ ++ ++ P SR + + ++ +L RL + K +
Sbjct: 190 KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL-LKSKPYENCLL 248
Query: 922 -LAD------------EC-SLVERENESVA---ANINKKRGQLDNLAPLL--KQLLSFL 961
L + C L+ + V + LD+ + L ++ S L
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL 307
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET:
NAG BMA MAN; 1.67A {Botrytis aclada}
Length = 580
Score = 51.3 bits (123), Expect = 1e-06
Identities = 26/163 (15%), Positives = 55/163 (33%), Gaps = 16/163 (9%)
Query: 136 YDILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQY 195
YD+++ AN+ N + N N I +Y++ + +PT+
Sbjct: 311 YDVIVE--ANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTT----- 363
Query: 196 MPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNI--QNNPNNFSQNN 253
P T ++ P+ + ++ + + N + N+ + ++ +
Sbjct: 364 -PRGTCEDEPVASLVPHLALDVGGYSLVDEQVSSAFTNYFTWTINSSSLLLDWSSPTTLK 422
Query: 254 ISQNNTNNTQINKTTQYNP-PPYPININKENTPAWLTNSATDG 295
I N T T+YN N N+E + + G
Sbjct: 423 IFNNETIF-----PTEYNVVALEQTNANEEWVVYVIEDLTGFG 460
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 47.4 bits (112), Expect = 3e-05
Identities = 49/302 (16%), Positives = 77/302 (25%), Gaps = 139/302 (46%)
Query: 293 TDGD--TTWF-PTGHTTCLLAGTERLK--FSYILPHTLPLYTCNLDQDN------HILSR 341
+ G PT +L+ F+ LP T D+ ++ +
Sbjct: 12 SHGSLEHVLLVPTA----SFFIASQLQEQFN----KILPEPTEGFAADDEPTTPAELVGK 63
Query: 342 ---HVSSRDE-------------MVVCFYRK------------SLKKLSHANLVKLKEVI 373
+VSS E + F L + + LVK KE+I
Sbjct: 64 FLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELI 123
Query: 374 R---------------------------ENDTLYFVF-------EYMKE--NLYQLIRDR 397
+ N L +F +Y +E +LY
Sbjct: 124 KNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLY----QT 179
Query: 398 DKFLPESIIRNMMYQVLQGLA-------FMHRHGFFHRDMKPENLLCMGTELVKIADFGL 450
L +I+ + L L + G N+L E ++
Sbjct: 180 YHVLVGDLIKFSA-ETLSELIRTTLDAEKVFTQGL--------NIL----EWLENPS--- 223
Query: 451 AREIRSRPYTDYVSTRWYRAPEVLLHSTAYSAP-IHLSRSQQFLFYSIDHVPPIQTTCLL 509
+ P DY L S S P I + Q Y + T L
Sbjct: 224 -----NTPDKDY------------LLSIPISCPLIGVI---QLAHYVV--------TAKL 255
Query: 510 AG 511
G
Sbjct: 256 LG 257
Score = 37.3 bits (86), Expect = 0.028
Identities = 31/173 (17%), Positives = 54/173 (31%), Gaps = 54/173 (31%)
Query: 379 LYFVFEYMKENLYQLIRDR-DKFLPES-------IIRNMMYQVLQGLAFMHRHGFFHRDM 430
LY + ++ + +R D ++ I+ N L H G + +
Sbjct: 1635 LYKTSKAAQD-----VWNRADNHFKDTYGFSILDIVINNP----VNLTI-HFGGEKGKRI 1684
Query: 431 KPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRWYRAPEVLLHSTAYSAPIHLSRSQ 490
+ EN M E I D L E + ++ ++ +R+ + LL +T +
Sbjct: 1685 R-ENYSAMIFE--TIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQF---------T 1732
Query: 491 QFLFYSIDHVPPIQTTCLLAGTERLKSSYILLHTLPLYTYHVPPIQTTCLLAG 543
Q P + A E LKS + I AG
Sbjct: 1733 Q---------PALTLME-KAAFEDLKSKGL--------------IPADATFAG 1761
Score = 34.6 bits (79), Expect = 0.19
Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 30/105 (28%)
Query: 275 YPININKENTPAWLTNSATDGDTTWFPTGHTTCLLA--GTERLKFSYILPHTLPLYTCNL 332
YP N P+ L +S + + P+ +L+ + + + + +
Sbjct: 314 YP---NTSLPPSILEDSLENNEGV--PS----PMLSISNLTQEQ---VQDY--------V 353
Query: 333 DQDNHIL--SRHVS-----SRDEMVVCFYRKSLKKLSHANLVKLK 370
++ N L + V +VV +SL L+ L K K
Sbjct: 354 NKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLT-LRKAK 397
Score = 31.2 bits (70), Expect = 2.2
Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 28/116 (24%)
Query: 262 TQINKTTQYNPPPYPININKENTPAWLTNSATD-----------GDTTWF-----PTGHT 305
+NKT + P + I+ L N A + G P+G
Sbjct: 351 DYVNKTNSHLPAGKQVEIS-------LVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLD 403
Query: 306 TCLLAGTER-LKFSYI-LPHTLPLYTCNLDQDNHILSRHVSSRDEMVVCFYRKSLK 359
+ +ER LKFS LP P ++ L + ++++ + + V F K ++
Sbjct: 404 QSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNN---VSFNAKDIQ 456
Score = 29.2 bits (65), Expect = 7.8
Identities = 32/148 (21%), Positives = 55/148 (37%), Gaps = 40/148 (27%)
Query: 62 LKKLSHANLVKLKEVILDPP-LHAYFQVGGPTTR----VTSLKREAASEHISARSIYPTV 116
+ +L+H +V K + P L +Y + G T VT++ A +E S S + +V
Sbjct: 243 VIQLAHY-VVTAKLLGFTPGELRSYLK--GATGHSQGLVTAV---AIAETDSWESFFVSV 296
Query: 117 KNTLTL--------------NVLPQPVTLYSHDYDILLSNPANSMLANNSMVS--TNNAV 160
+ +T+ LP + S + + + +P ML+ +S T V
Sbjct: 297 RKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSP---MLS----ISNLTQEQV 349
Query: 161 -----YVNQN-PHNNNPNISQYNNPNNY 182
N + P IS N N
Sbjct: 350 QDYVNKTNSHLPAGKQVEISLVNGAKNL 377
Score = 29.2 bits (65), Expect = 8.2
Identities = 13/125 (10%), Positives = 33/125 (26%), Gaps = 35/125 (28%)
Query: 43 MKRKYYS--------WEEAMNLREVKSLKKLSHANLVKLKEVILDPPLHAYFQVGGPTTR 94
M Y W A + +++++ P++ GG +
Sbjct: 1631 MGMDLYKTSKAAQDVWNRA--------DNHFKDTYGFSILDIVINNPVNLTIHFGGEKGK 1682
Query: 95 -----VTSLKREAASE-HISARSIYPTVKNTLTLNVLPQPVTLYSHDYDILL--SN--PA 144
+++ E + + I+ + T + + +L PA
Sbjct: 1683 RIRENYSAMIFETIVDGKLKTEKIFKEINEHSTS-------YTFRSEKGLLSATQFTQPA 1735
Query: 145 NSMLA 149
+
Sbjct: 1736 --LTL 1738
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 42.8 bits (100), Expect = 1e-04
Identities = 10/58 (17%), Positives = 21/58 (36%), Gaps = 11/58 (18%)
Query: 894 ISRPEVTKEDPHQLKLARLEWELKQRKELA--DECSLVERENESVAANINKKRGQLDN 949
I++ + ++P ++ +W +QRK L D K + L+
Sbjct: 74 IAQADRLTQEPESIR----KWREEQRKRLQELD-----AASKVMEQEWREKAKKDLEE 122
Score = 33.2 bits (75), Expect = 0.24
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 38/102 (37%)
Query: 802 AQQSLSIK--REVSLSFVLLKKLNRLEKYRLKNARET-------LQAKKSKVDSFNLQLQ 852
Q+ SI+ RE ++ RL++ +A +AKK ++ +
Sbjct: 81 TQEPESIRKWRE--------EQRKRLQE---LDAASKVMEQEWREKAKKD-LEEW----- 123
Query: 853 NLKYEIFHLKKEVVKCLQFKSKDEDIDLVDEETFFKDAPESI 894
+ + E K+K + + ++ F++ I
Sbjct: 124 ---NQRQSEQVE-------KNKINN--RIADKAFYQQPDADI 153
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia
chrysanthemi} SCOP: b.80.1.9
Length = 400
Score = 43.6 bits (102), Expect = 2e-04
Identities = 25/200 (12%), Positives = 57/200 (28%), Gaps = 21/200 (10%)
Query: 106 HISARSIYPTVKNTLTLNVLPQPVTLYSHDYDILLSNPANSMLANNSMVSTNNAVYVNQN 165
I+ Y TV N+ +YD + N +
Sbjct: 155 EINNGGSYNTVINSDAYR-----------NYDPKKNGSMADGFGPKQKQGPGNRFVGCRA 203
Query: 166 PHNNNPNISQYNNPNN--YDPTTSQNNNISQYMPNNTSQNNNNTQ---YNPNSSQNMPNN 220
N++ +++P + + + N I+ + + + N N + + + +
Sbjct: 204 WENSDDGFDLFDSPQKVVIENSWAFRNGINYWNDSAFAGNGNGFKLGGNQAVGNHRITRS 263
Query: 221 ISQNANNT----QNNPNNSHYNPNNIQNNPNNFSQNNISQNNTNNTQINKTTQYNPPPYP 276
++ + NN N N N+ + Q+ + N +
Sbjct: 264 VAFGNVSKGFDQNNNAGGVTVINNTSYKNGINYGFGSNVQSGQKHYFRNNVSLSASVTVS 323
Query: 277 ININKENTPAWLTNSATDGD 296
K N+ +A+ D
Sbjct: 324 NADAKSNS-WDTGPAASASD 342
Score = 36.7 bits (84), Expect = 0.035
Identities = 20/148 (13%), Positives = 45/148 (30%), Gaps = 16/148 (10%)
Query: 135 DYDILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNI-- 192
D L + ++ NS N Y N + N N + +
Sbjct: 208 DDGFDLFDSPQKVVIENSWAFRNGINYWNDSAFAGNGNGFKLGGNQAVGNHRITRSVAFG 267
Query: 193 -------------SQYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYN- 238
+ NNTS N ++ Q+ + +N + + S+ +
Sbjct: 268 NVSKGFDQNNNAGGVTVINNTSYKNGINYGFGSNVQSGQKHYFRNNVSLSASVTVSNADA 327
Query: 239 PNNIQNNPNNFSQNNISQNNTNNTQINK 266
+N + S ++ +T+ +++
Sbjct: 328 KSNSWDTGPAASASDFVSLDTSLATVSR 355
Score = 34.4 bits (78), Expect = 0.18
Identities = 23/176 (13%), Positives = 49/176 (27%), Gaps = 19/176 (10%)
Query: 145 NSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNN 204
+ ++ V + YV + + + +N N +N
Sbjct: 95 DFSFPDSQWVQASYGFYVTGD-YWYFKGVEVTRAGYQGAYVIGSHNTFE----NTAFHHN 149
Query: 205 NNT---QYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNTNN 261
NT N S + N+ + + + N + + + P N + N+++
Sbjct: 150 RNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDD 209
Query: 262 -----TQINKTTQYNPPPYPININKENTPAWLTNSATDGDTTWFPTGHTTCLLAGT 312
K N + N + +SA G+ F G +
Sbjct: 210 GFDLFDSPQKVVIEN------SWAFRNGINYWNDSAFAGNGNGFKLGGNQAVGNHR 259
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment
2, heavy meromyosin, essential light chain, motor
protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1
PDB: 3j04_A 3dtp_B 3dtp_A
Length = 1184
Score = 43.7 bits (103), Expect = 3e-04
Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 6/140 (4%)
Query: 818 LLKKLNRLEKYRLKNARETLQAKKSKVDSFNLQLQNLKYEIFHLKKEVVKCLQFKSKDED 877
L ++L E R K E K+ + ++ + L KE K L+ + D
Sbjct: 960 LEEQLEEEEAARQKLQLE-KVTADGKIKKMEDDILIMEDQNNKLTKER-KLLEERVSDLT 1017
Query: 878 IDLVDEETFFKDAPESISRPEVTKEDPHQLKLARLEWELKQRKELADECSLVERENESVA 937
+L +EE K+ + ++ E + L+ RL+ E K R+EL +E E+ +
Sbjct: 1018 TNLAEEEEKAKNLTKLKNKHESMISE---LE-VRLKKEEKSRQELEKIKRKLEGESSDLH 1073
Query: 938 ANINKKRGQLDNLAPLLKQL 957
I + + Q+ L L +
Sbjct: 1074 EQIAELQAQIAELKAQLAKK 1093
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG
MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3
b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A*
2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Length = 559
Score = 42.7 bits (101), Expect = 6e-04
Identities = 20/156 (12%), Positives = 38/156 (24%), Gaps = 9/156 (5%)
Query: 136 YDILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPNIS---QYNNPNNYDPTTSQNNNI 192
YD+++ A+ N + NP+ + Y PT +
Sbjct: 273 YDVVID--ASRAPDNYWFNV--TFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPV 328
Query: 193 SQYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNN--PNNFS 250
+ + P +S + + + N N
Sbjct: 329 DHQCLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPI 388
Query: 251 QNNISQNNTNNTQINKTTQYNPPPYPININKENTPA 286
+ I NT+ + Q + EN P
Sbjct: 389 IDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPE 424
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper
depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A
{Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB:
1a65_A*
Length = 503
Score = 41.9 bits (99), Expect = 0.001
Identities = 23/150 (15%), Positives = 42/150 (28%), Gaps = 22/150 (14%)
Query: 136 YDILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPNIS---QYNNPNNYDPTTSQNNNI 192
Y +L AN + N + + N N S +Y N DPTTS N N
Sbjct: 243 YSFVLD--ANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP 300
Query: 193 SQYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNI----QNNP-- 246
+Q + + + N+ Q + + N + P
Sbjct: 301 AQLNEADLHALIDPAAPGIPTPGAADVNL-----RFQLGFSGGRFTINGTAYESPSVPTL 355
Query: 247 ------NNFSQNNISQNNTNNTQINKTTQY 270
+ + + + N+ +
Sbjct: 356 LQIMSGAQSANDLLPAGSVYELPRNQVVEL 385
>4f7a_A Putative uncharacterized protein; TPR-like protein, mucin O-glycan
binding, structural genomic center for structural
genomics, JCSG; HET: PGE; 1.85A {Bacteroides vulgatus}
Length = 511
Score = 41.0 bits (95), Expect = 0.002
Identities = 14/104 (13%), Positives = 27/104 (25%), Gaps = 22/104 (21%)
Query: 156 TNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNN-----------ISQYMPNNTSQ-N 203
+ + + N Q NYD S Y + S+ +
Sbjct: 10 DDTVKEYDFQKYTTNFETIQKGIYFNYDWGEGTTWPWQTFQNLNHDMFSGYFHDFASKFS 69
Query: 204 NNNTQYNPNSS----------QNMPNNISQNANNTQNNPNNSHY 237
+ NT Y + + ++ TQ+ H+
Sbjct: 70 DKNTVYALEAGWTASAWNYTYNYIFPVAHKSTLITQDEAKYKHF 113
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease,
alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas
SP} PDB: 3nqy_B 3nqz_B
Length = 306
Score = 40.1 bits (93), Expect = 0.002
Identities = 23/146 (15%), Positives = 42/146 (28%), Gaps = 20/146 (13%)
Query: 169 NNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQN---NNNTQYNPNSSQNMPNNISQNA 225
N +Y ++D + + M N + N T + S P N +
Sbjct: 8 GNLKTGKYLYGTDFDSLDVSQSGNTCSMNNANVRTINLNGGTSGSSAYSFTCPENTFKEI 67
Query: 226 NNTQNNPNNSHYNPNNIQN-NPNNFSQNNISQNNTNNTQINKTTQYNPPPYPININKENT 284
N + N++H+ N I N + +S +
Sbjct: 68 NGAYSPLNDAHFFGNVIFNMYNDWLGTAPLSFQLQMRVHYSSNY--------------EN 113
Query: 285 PAWLTNSAT--DGDTTWFPTGHTTCL 308
W ++ T DG T++P
Sbjct: 114 AFWDGSAMTFGDGQNTFYPLVSLDVS 139
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan
sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter
heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Length = 506
Score = 40.1 bits (92), Expect = 0.003
Identities = 23/223 (10%), Positives = 49/223 (21%), Gaps = 12/223 (5%)
Query: 102 AASEHISARSIYPTVKNTLTLNVLPQPVTLYSHDYDI----LLSNPANSMLANNSMVSTN 157
+ +E I+++S LN + + N + +
Sbjct: 242 SEAEIITSKSQENVYYGNTYLNCQGTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWGSR 301
Query: 158 NAVYVN----QNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPNS 213
+ + N + N + Y NP + ++ + NN N N + N
Sbjct: 302 HVIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDM--LIANNAFINVNGYAIHFNP 359
Query: 214 SQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFS--QNNISQNNTNNTQINKTTQYN 271
P+ N + + N+
Sbjct: 360 LDERRKEYCAANRLKFETPHQLMLKGNLFFKDKPYVYPFFKDDYFIAGKNSWTGNVALGV 419
Query: 272 PPPYPININKENTPAWLTNSATDGDTTWFPTGHTTCLLAGTER 314
P+NI+ + + G
Sbjct: 420 EKGIPVNISANRSAYKPVKIKDIQPIEGIALDLNALISKGITG 462
Score = 35.1 bits (79), Expect = 0.12
Identities = 20/126 (15%), Positives = 38/126 (30%), Gaps = 4/126 (3%)
Query: 138 ILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMP 197
+ ANS S+ + H + + ++ N + T + S P
Sbjct: 135 FDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFTDKITFDQVINLNNTARAIKDGSVGGP 194
Query: 198 NNTSQNNNNTQYNPNSSQNMPNNI----SQNANNTQNNPNNSHYNPNNIQNNPNNFSQNN 253
+ ++ NP N I +N +N ++ + SQ N
Sbjct: 195 GMYHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQDSEAEIITSKSQEN 254
Query: 254 ISQNNT 259
+ NT
Sbjct: 255 VYYGNT 260
Score = 34.7 bits (78), Expect = 0.17
Identities = 19/151 (12%), Positives = 36/151 (23%), Gaps = 11/151 (7%)
Query: 150 NNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNN-----NISQYMPNNTSQNN 204
+ Q P N I N+ +N + + + SQ N
Sbjct: 195 GMYHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQDSEAEIITSKSQEN 254
Query: 205 ---NNTQYNPNSS--QNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNT 259
NT N + ++ N N Y + + + N + +
Sbjct: 255 VYYGNTYLNCQGTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWGS-RHVIACNYFELSE 313
Query: 260 NNTQINKTTQYNPPPYPININKENTPAWLTN 290
Y P + + + N
Sbjct: 314 TIKSRGNAALYLNPGAMASEHALAFDMLIAN 344
Score = 30.4 bits (67), Expect = 3.3
Identities = 18/157 (11%), Positives = 37/157 (23%), Gaps = 13/157 (8%)
Query: 145 NSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNN 204
+ ++ANN+ ++ N N P + N +
Sbjct: 339 DMLIANNAFINVNGYAIHFNPLDERRKEYCAANRLKFETPHQLM-------LKGNLFFKD 391
Query: 205 NN---TQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNTNN 261
+ + N+ + N + + N P + +
Sbjct: 392 KPYVYPFFKDDYFIAGKNSWTGNVALGVEKGIPVNISANRSAYKPVKIKDIQPIEGIALD 451
Query: 262 TQINKTTQYNPPPYPININKENTPAWLTNSATDGDTT 298
N P++ + E P WL T
Sbjct: 452 L--NALISKGITGKPLSWD-EVRPYWLKEMPGTYALT 485
Score = 29.7 bits (65), Expect = 6.2
Identities = 15/123 (12%), Positives = 37/123 (30%), Gaps = 7/123 (5%)
Query: 142 NPANSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTS 201
+ ++ A S A+Y + N ++ N+ + + +P +
Sbjct: 105 DGNRAIQAWKSHGPGLVAIYGSYNRITAC-VFDCFDEANSA--YITTSLTEDGKVPQHCR 161
Query: 202 QNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNTNN 261
++ + Q + N + A + Y + + + FS N
Sbjct: 162 IDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMY--HRVDH--CFFSNPQKPGNAGGG 217
Query: 262 TQI 264
+I
Sbjct: 218 IRI 220
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase;
1.80A {Bacillus SP} PDB: 2inv_A*
Length = 410
Score = 39.5 bits (91), Expect = 0.004
Identities = 16/136 (11%), Positives = 33/136 (24%), Gaps = 14/136 (10%)
Query: 133 SHDYDILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNP----NISQYNNPNNYDPTTSQ 188
I + + +N + + N N +I + N P +
Sbjct: 252 RGRSLIEFTGCNRCSVTSNRLQGFYPGMLRLLNGCKENLITANHIRRTNEGYP--PFIGR 309
Query: 189 NNNISQYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNN 248
N + +NN + N + N P + I N
Sbjct: 310 GNGLDDLYGVVHIAGDNNLISD--------NLFAYNVPPANIAPAGAQPTQILIAGGDAN 361
Query: 249 FSQNNISQNNTNNTQI 264
N ++ + +
Sbjct: 362 VVALNHVVSDVASQHV 377
Score = 28.8 bits (63), Expect = 9.7
Identities = 13/100 (13%), Positives = 30/100 (30%), Gaps = 12/100 (12%)
Query: 141 SNPANSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTT-----SQNNNISQY 195
N + + + NN + N +N P PT N ++
Sbjct: 310 GNGLDDLYGVVHIAGDNNLISDNLFAYNV---PPANIAPAGAQPTQILIAGGDANVVAL- 365
Query: 196 MPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNS 235
N+ + + ++S + + + +Q +S
Sbjct: 366 --NHVVSDVASQHVVLDASTTH-SKVLDSGTASQITSYSS 402
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1
PDB: 2tma_A 2w49_A 2w4u_A
Length = 284
Score = 38.1 bits (88), Expect = 0.008
Identities = 20/145 (13%), Positives = 59/145 (40%), Gaps = 9/145 (6%)
Query: 820 KKLNRLEKYRLKNARETLQAKKSKVDSFNLQLQNLKYEIFHLKKEV-VKCLQFKSKDEDI 878
+K+ E +LK A+ + K + +L ++ ++ ++ + + +E+I
Sbjct: 139 EKMEIQEI-QLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEI 197
Query: 879 DLVDEETFFKDAPESISRPEVTKEDPHQLKLARLEWELK----QRKELADECSLVERENE 934
V + E+ + KED ++ ++ L +LK + + + +E+ +
Sbjct: 198 KTVTNN---LKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSID 254
Query: 935 SVAANINKKRGQLDNLAPLLKQLLS 959
+ + ++ + ++ L L+
Sbjct: 255 DLEDELYAQKLKYKAISEELDHALN 279
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2
Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB:
3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A*
2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A*
4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Length = 499
Score = 38.0 bits (89), Expect = 0.015
Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 14/142 (9%)
Query: 136 YDILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPN--ISQYNNPNNYDPTTSQNNNIS 193
Y +L AN + N + + + N I +Y+ +PTT+Q ++
Sbjct: 244 YSFVLD--ANQAVDNYWIRAN---PNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSVK 298
Query: 194 QYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQ-NNPNNFS-Q 251
+ + SS + I N N N S++ N P
Sbjct: 299 PLNEVDLHPLVSTPVPGAPSSGGVDKAI-----NMAFNFNGSNFFINGASFVPPTVPVLL 353
Query: 252 NNISQNNTNNTQINKTTQYNPP 273
+S T + + Y P
Sbjct: 354 QILSGAQTAQDLLPSGSVYVLP 375
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets,
alpha helices, AMY amyloidosis, blood coagulation,
disease mutation, glycoprot phosphoprotein; HET: NAG NDG
BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A*
2a45_G*
Length = 562
Score = 37.2 bits (85), Expect = 0.027
Identities = 19/171 (11%), Positives = 46/171 (26%), Gaps = 3/171 (1%)
Query: 143 PANSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQ 202
+ + + N + + N ++ P + NP + + P +T
Sbjct: 255 STSYGTGSETESPRNPSSAGSWNSGSSGPGSTGNRNPGSSGTGGTATWKPGSSGPGSTGS 314
Query: 203 NNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNTNNT 262
N+ + ++ P S +T S + + + Q ++ +
Sbjct: 315 WNSGSSGTGSTGNQNPG--SPRPGSTGTWNPGSSERGSAGHWTSESSVSGSTGQWHSESG 372
Query: 263 QINKTTQYNPPPYPININKENTPAWLTNSATDGDTTWFPTGHTTCLLAGTE 313
+ + P N + N + G + T E
Sbjct: 373 SFRPDSPGSGNARPNNPDWGTFEEVSGNVSP-GTRREYHTEKLVTSKGDKE 422
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase;
2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Length = 377
Score = 36.7 bits (84), Expect = 0.028
Identities = 15/133 (11%), Positives = 34/133 (25%), Gaps = 15/133 (11%)
Query: 142 NPANSMLANNSMVSTNNAVYVNQNPHNN--NPNISQYNNPNNYDPTTSQNNNISQYMPNN 199
P+N ++ + + + + N + +Q+ I +N
Sbjct: 233 LPSNILIDGGAYYDNAREGVLLKMTSDITLQNADIHGNGSSGVRVYGAQDVQIL----DN 288
Query: 200 TSQNNNNTQYNPNSSQNM-------PNNISQNANNTQ--NNPNNSHYNPNNIQNNPNNFS 250
+N P N N + S + IQ +
Sbjct: 289 QIHDNAQAAAVPEVLLQSFDDTAGASGTYYTTLNTRIEGNTISGSANSTYGIQERNDGTD 348
Query: 251 QNNISQNNTNNTQ 263
+++ N+ Q
Sbjct: 349 YSSLIDNDIAGVQ 361
Score = 32.1 bits (72), Expect = 0.81
Identities = 14/132 (10%), Positives = 34/132 (25%)
Query: 128 PVTLYSHDYDILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTS 187
+ +N + + ++ + + N +
Sbjct: 82 DQKITGMVRSAYGEETSNFGMRDLTLDGNRDNTSGKVDGWFNGYIPGGDGADRDVTIERV 141
Query: 188 QNNNISQYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPN 247
+ +S Y + Q N T + + N + + NN Y + N
Sbjct: 142 EVREMSGYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYANDRHGFNVV 201
Query: 248 NFSQNNISQNNT 259
+ + + NN
Sbjct: 202 TSTHDFVMTNNV 213
Score = 32.1 bits (72), Expect = 0.89
Identities = 11/109 (10%), Positives = 35/109 (32%), Gaps = 7/109 (6%)
Query: 156 TNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNN---NNTQYNPN 212
N + V+ + P + + + + + P+ + N ++ ++
Sbjct: 112 DNTSGKVDGWFNGYIPGGDGADRDVTIERVEVREMSGYGFDPHEQTINLTIRDSVAHDNG 171
Query: 213 SSQNMPNNISQNA--NNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNT 259
+ + + + NN + +N ++ NN++ N
Sbjct: 172 LDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHD--FVMTNNVAYGNG 218
>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta
helix, heme uptake, spate, hydrolase; 2.20A {Escherichia
coli} PDB: 3ak5_A
Length = 1048
Score = 37.3 bits (85), Expect = 0.029
Identities = 14/161 (8%), Positives = 46/161 (28%), Gaps = 7/161 (4%)
Query: 115 TVKNTLTLNVLPQPVTLYSHDYDILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPNIS 174
+ + +N+ ++L S ++ + A + + ++A + NI+
Sbjct: 777 SFVSDGPVNISDATLSLNSRPDEVSHTLLPVYDYAGSWNLKGDDARLNVGPYSMLSGNIN 836
Query: 175 QYN----NPNNYDPTTSQNNNISQYMPNNTSQNNNNTQ---YNPNSSQNMPNNISQNANN 227
+ + +Q + + + N P+++ +M + N
Sbjct: 837 VQDKGTVTLGGEGELSPDLTLQNQMLYSLFNGYRNIWSGSLNAPDATVSMTDTQWSMNGN 896
Query: 228 TQNNPNNSHYNPNNIQNNPNNFSQNNISQNNTNNTQINKTT 268
+ + + F+ + + T
Sbjct: 897 STAGNMKLNRTIVGFNGGTSPFTTLTTDNLDAVQSAFVMRT 937
>1k3v_A Capsid protein VP2; icosahadral, beta sheet, icosahedral virus;
3.50A {Porcine parvovirus} SCOP: b.121.5.2
Length = 579
Score = 36.7 bits (84), Expect = 0.037
Identities = 15/117 (12%), Positives = 30/117 (25%), Gaps = 3/117 (2%)
Query: 161 YVNQNPHNNNPNIS--QYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQNMP 218
P+ N + + P T N++ T + +
Sbjct: 335 VGYNTPYMNFEYSNGGPFLTPIVPTADTQYNDDEPNGAIRFTMDYQHGHLTTSSQELERY 394
Query: 219 NNISQNANNTQNNPNNSHYNPNNIQNNPNNFS-QNNISQNNTNNTQINKTTQYNPPP 274
Q+ + P N++N N ++ +N +N Y P
Sbjct: 395 TFNPQSKCGRAPKQQFNQQAPLNLENTNNGTLLPSDPIGGKSNMHFMNTLNTYGPLT 451
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum
ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Length = 495
Score = 36.5 bits (85), Expect = 0.043
Identities = 27/156 (17%), Positives = 48/156 (30%), Gaps = 26/156 (16%)
Query: 136 YDILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQY 195
Y +L+ AN + N + + N+ + N I +Y+ DP T
Sbjct: 247 YSFVLN--ANQPVGNYWIRANPNSGGEGFDG-GINSAILRYDGATTADPVTVA------- 296
Query: 196 MPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNIS 255
++ T +P S +P N Q + N ++ NF N +S
Sbjct: 297 -STVHTKCLIETDLHPLSRNGVPGNPHQGGADCNLN--------LSLGFACGNFVINGVS 347
Query: 256 QNN-------TNNTQINKTTQYNPPPYPININKENT 284
+ N P I++ +T
Sbjct: 348 FTPPTVPVLLQICSGANTAADLLPSGSVISLPSNST 383
>2kzw_A Uncharacterized protein; structural genomics, northeast structural
genomics consortiu PSI-2, protein structure initiative;
NMR {Methanosarcina mazei}
Length = 145
Score = 34.9 bits (80), Expect = 0.044
Identities = 12/87 (13%), Positives = 27/87 (31%), Gaps = 3/87 (3%)
Query: 212 NSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNTNNTQINKTTQYN 271
N+ N N + + N ++ S N + I ++ ++ N + + +
Sbjct: 2 NARDNKFNTWNDSRGNYWSDYEGSDENGDGIGDSA--YAVNPEAGSMDYMPLMEYLHSSP 59
Query: 272 PPPYP-ININKENTPAWLTNSATDGDT 297
P + A L+ D
Sbjct: 60 VLPTARFTSDITEGFAPLSVRFKDFSE 86
>3h09_A IGA1 protease, immunoglobulin A1 protease; serine protease, beta
helix, hydrolase, M protease, secreted, transmembrane,
virulence; 1.75A {Haemophilus influenzae}
Length = 989
Score = 36.6 bits (83), Expect = 0.046
Identities = 15/126 (11%), Positives = 38/126 (30%), Gaps = 1/126 (0%)
Query: 170 NPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQ 229
+ + YN+ N Y P + + SQ++ + + N+
Sbjct: 161 SSDAGTYNDQNKY-PAFVRLGSGSQFIYKKGDNYSLILNNHEVGGNNLKLVGDAYTYGIA 219
Query: 230 NNPNNSHYNPNNIQNNPNNFSQNNISQNNTNNTQINKTTQYNPPPYPININKENTPAWLT 289
P ++ N + N+ +++ + + + P+ + WL
Sbjct: 220 GTPYKVNHENNGLIGFGNSKEEHSDPKGILSQDPLTNYAVLGDSGSPLFVYDREKGKWLF 279
Query: 290 NSATDG 295
+ D
Sbjct: 280 LGSYDF 285
Score = 28.9 bits (63), Expect = 9.2
Identities = 17/146 (11%), Positives = 38/146 (26%), Gaps = 19/146 (13%)
Query: 158 NAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQNM 217
Y +N + T + S +NTQYN N +
Sbjct: 280 LGSYDFWAGYNKKSWQEWNIYKPEFAKTVLDKDT-------AGSLTGSNTQYNWNPTGK- 331
Query: 218 PNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNTNNTQINKTTQYNPPPYPI 277
+ + + + + ++ Q+ + + + S + + + +
Sbjct: 332 ------TSVISNGSESLNVDLFDSSQDTDSKKNNHGKSVTLRGSGTLTLNNNIDQGAGGL 385
Query: 278 NINKENTPAWLTNSATDGDTTWFPTG 303
+ T TTW G
Sbjct: 386 FFEGDY-----EVKGTSDSTTWKGAG 406
>1s58_A B19 parvovirus capsid; icosahedral capsid, beta-barrel, icosahedral
virus; 3.50A {Human parvovirus B19} SCOP: b.121.5.2
Length = 554
Score = 36.3 bits (83), Expect = 0.049
Identities = 16/119 (13%), Positives = 32/119 (26%), Gaps = 11/119 (9%)
Query: 114 PTVKNTLTLNVLPQPVTLYSHDYDILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPNI 173
+++ P PV+ H +D + +++ N Q PN
Sbjct: 318 TGTSQNTRISLRPGPVSQPYHHWDTDKYVTGINAISHGQTTYGNAEDKEYQQGVGRFPNE 377
Query: 174 SQYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNP 232
+ N+ Y PN +Q + P M ++ +
Sbjct: 378 KEQLKQLQ-------GLNMHTYFPNKGTQQYTDQIERPL----MVGSVWNRRALHYESQ 425
Score = 30.5 bits (68), Expect = 3.4
Identities = 20/146 (13%), Positives = 39/146 (26%), Gaps = 10/146 (6%)
Query: 157 NNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQN 216
N NP Y + T + + + N + P N
Sbjct: 241 NLEGCSQHFYEMYNP---LYGSRLGVPDTLGGDPKFRSLTHEDHAIQPQN--FMPGPLVN 295
Query: 217 MPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNTNNTQINKTTQYNPPPYP 276
+ +++NT + + QN + +SQ + T +Y
Sbjct: 296 SVSTKEGDSSNTGAGKALTGLSTGTSQNTRISLRPGPVSQPYHHWD----TDKYVTGINA 351
Query: 277 ININKENTPAWLTNSATDGDTTWFPT 302
I+ + + T + FP
Sbjct: 352 IS-HGQTTYGNAEDKEYQQGVGRFPN 376
>3n7l_A Neurotoxin; HCR/D-SA, ganglioside binding loop; 2.00A {Clostridium
botulinum} PDB: 3azw_A 3azv_A 3n7m_A 3n7k_A 3r4s_A*
3r4u_A
Length = 424
Score = 35.3 bits (80), Expect = 0.086
Identities = 32/173 (18%), Positives = 55/173 (31%), Gaps = 18/173 (10%)
Query: 98 LKREAASEHISARSIYPTVKNTLTLNVLPQPVTLYSHDYDILLSNPANSMLANNSMVSTN 157
+E + I+ ++ +++ T + Y +Y ++ N N M
Sbjct: 211 FAKELDDKDIN--ILFNSLQYTNVVKDYWGNDLRYDKEYYMI-----NVNYMNRYMSKKG 263
Query: 158 NAVYVNQNPHNNNPN-----ISQYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPN 212
N + N +NN+ N I + N D N + N T N +
Sbjct: 264 NGIVFNTRKNNNDFNEGYKIIIKRIRGNTNDTRVRGENVL---YFNTTIDNKQYSLGMYK 320
Query: 213 SSQNMPNNISQNANNTQNNPNNSHYNPNNIQNN---PNNFSQNNISQNNTNNT 262
S+N+ ++ Q Y IQ SQ +S N T N
Sbjct: 321 PSRNLGTDLVPLGALDQPMDEIRKYGSFIIQPCNTFDYYASQLFLSSNATTNR 373
>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription,
mRNA, multiprotein complex; HET: UTP; 2.30A
{Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A
1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A*
1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A*
1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ...
Length = 1733
Score = 35.8 bits (82), Expect = 0.092
Identities = 21/120 (17%), Positives = 46/120 (38%), Gaps = 1/120 (0%)
Query: 155 STNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNIS-QYMPNNTSQNNNNTQYNPNS 213
S + Y +P + + S +Y PT+ + S Y P + + + + Y+P S
Sbjct: 1613 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTS 1672
Query: 214 SQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNTNNTQINKTTQYNPP 273
P + S + + +P + +Y+P + +P + + S + K +
Sbjct: 1673 PSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENS 1732
Score = 34.7 bits (79), Expect = 0.17
Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 174 SQYNNPN--NYDPTTSQNNNISQ-YMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQN 230
S +P Y PT+ + S Y P + S + + Y+P S P + S + +
Sbjct: 1546 SPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1605
Query: 231 NPNNSHYNPNNIQNNPNNFSQNNISQN 257
+P + Y+P + +P + S + S +
Sbjct: 1606 SPTSPSYSPTSPSYSPTSPSYSPTSPS 1632
Score = 34.7 bits (79), Expect = 0.22
Identities = 19/97 (19%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 181 NYDPTTSQNNNIS-QYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNP 239
+ PT+ + S Y P + S + + Y+P S P + S + + +P + Y+P
Sbjct: 1541 GFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1600
Query: 240 NNIQNNPNNFSQNNISQNNTNNTQINKTTQYNPPPYP 276
+ +P + S + S + + + T + P
Sbjct: 1601 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1637
Score = 34.3 bits (78), Expect = 0.28
Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Query: 164 QNPHNNNPNISQYNNPNNYDPTTSQNNNIS-QYMPNNTSQNNNNTQYNPNSSQNMPNNIS 222
+ +P+ S + Y PT+ + S Y P + S + + Y+P S P + S
Sbjct: 1568 PSYSPTSPSYSPTSPS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1625
Query: 223 QNANNTQNNPNNSHYNPNNIQNNP--NNFSQNNISQNNTNNTQINKTTQYNP--PPY 275
+ + +P + Y+P + +P ++S + + + T+ + + Y+P P Y
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1682
Score = 33.9 bits (77), Expect = 0.34
Identities = 25/124 (20%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
Query: 155 STNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNIS-QYMPNNTSQNNNNTQYNPNS 213
S + Y +P + + S +Y PT+ + S Y P + S + + Y+P S
Sbjct: 1571 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1630
Query: 214 SQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNT-NNTQINKTTQYNP 272
P + S + + +P + Y+P + +P + S + S + + + + T+
Sbjct: 1631 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1690
Query: 273 PPYP 276
P P
Sbjct: 1691 PTSP 1694
Score = 29.3 bits (65), Expect = 7.8
Identities = 22/138 (15%), Positives = 48/138 (34%), Gaps = 9/138 (6%)
Query: 141 SNPANSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQ-YMPNN 199
S L ++ + + S + PT+ S + P +
Sbjct: 1488 DELMFSPLVDSGSNDAMAGGFTAYGGADYGEATSPFGAYG-EAPTSPGFGVSSPGFSPTS 1546
Query: 200 TSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNT 259
+ + + Y+P S P + S + + +P + Y+P + +P + S + S + +
Sbjct: 1547 PTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1606
Query: 260 NNTQINKTTQYNP--PPY 275
+ Y+P P Y
Sbjct: 1607 PTSP-----SYSPTSPSY 1619
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for
structural genomics of infec diseases, csgid; HET: MSE
ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A*
4dca_A* 3hav_A* 3ham_A*
Length = 320
Score = 34.7 bits (79), Expect = 0.11
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 4/101 (3%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
LK+L + + + + L I ++++ L + ++ ++
Sbjct: 136 TFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYEN 195
Query: 416 GLA----FMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
L+ F + H D N++ L + DFG
Sbjct: 196 ILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFN 236
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus
lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Length = 521
Score = 35.0 bits (81), Expect = 0.11
Identities = 27/142 (19%), Positives = 42/142 (29%), Gaps = 10/142 (7%)
Query: 136 YDILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQY 195
Y +++ AN + N + + + N I +Y +PTTSQN+ +
Sbjct: 270 YSVVVE--ANQAVGNYWIRANPSNGRNGFTG-GINSAIFRYQGAAVAEPTTSQNSGTALN 326
Query: 196 MPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQ-NNPNNSHYNPNNI-QNNPNNFSQNN 253
N N NP +P N N N + + N P
Sbjct: 327 EANLIPLINPGAPGNP-----VPGGADINLNLRIGRNATTADFTINGAPFIPPTVPVLLQ 381
Query: 254 ISQNNTNNTQINKTTQYNPPPY 275
I TN + P
Sbjct: 382 ILSGVTNPNDLLPGGAVISLPA 403
>2xqh_A Immunoglobulin-binding protein EIBD; cell adhesion, virulence,
beta-helix; 1.99A {Escherichia coli}
Length = 281
Score = 34.7 bits (79), Expect = 0.13
Identities = 17/183 (9%), Positives = 33/183 (18%), Gaps = 30/183 (16%)
Query: 141 SNPANSM-LANNSMVSTNNAV-----------------YVNQNPHNNNPNISQYNN---- 178
+ L + V+ N+V Y +
Sbjct: 101 KDATEGTALGAKATVTNKNSVALGANSVTTRDNEVYIGYKTGTESDKTYGTRVLGGLSDG 160
Query: 179 PNNYDPTT-SQNNNISQYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHY 237
N D T Q N + ++ + + +
Sbjct: 161 TRNSDAATVGQLNRKVGGVYDDVKARITVESEKQKKYTDQKTSEVNEKVEARTTVGVDSD 220
Query: 238 NPNNIQNNPNNFSQNN--ISQNNTNNTQINKTTQYNPPPYPININKENTPAWLTNSATDG 295
N + + +I+ NT + NS
Sbjct: 221 GKLTRAEGATKTIAVNDGLVALSGRTDRIDYAVGAI-----DGRVTRNTQSIEKNSKAIA 275
Query: 296 DTT 298
T
Sbjct: 276 ANT 278
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE;
2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Length = 609
Score = 34.8 bits (79), Expect = 0.15
Identities = 28/226 (12%), Positives = 59/226 (26%), Gaps = 25/226 (11%)
Query: 136 YDILLSNPANSMLANNSMVSTN---NAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNI 192
+I+ SN + N N + V+ ++ Y + N T
Sbjct: 297 KNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETVV---S 353
Query: 193 SQYMPNNTSQNNNNTQYNPNSSQ--------NMPNNISQNANNTQNNPNNSHYNPNNIQN 244
Q+ N S N NS + ++ + N+ + I+N
Sbjct: 354 VQFRARNCSLNGVVLTGFSNSENGIYVIGGSRGGDAVNISNVTLNNSGRYGVSIGSGIEN 413
Query: 245 -NPNNFSQNNISQNN------TNNTQIN----KTTQYNPPPYPININKENTPAWLTNSAT 293
+ N S N+ T N+ + Y + + +
Sbjct: 414 VSITNISGIGDGINSPVALVSTINSNPEISGLSSIGYPTVARVAGTDYNDGLTLFNGAFR 473
Query: 294 DGDTTWFPTGHTTCLLAGTERLKFSYILPHTLPLYTCNLDQDNHIL 339
T+ ++ T + S L + + ++
Sbjct: 474 ASTTSSGKIHSEGFIMGSTSGCEASVSKSGVLTSSSSKTSSERSLI 519
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA;
1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A
2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Length = 399
Score = 34.5 bits (78), Expect = 0.16
Identities = 21/170 (12%), Positives = 50/170 (29%), Gaps = 26/170 (15%)
Query: 131 LYSHDYDILL-SNPANSMLANNSMVSTNNAVYVNQ---NPHNNNPNISQYNNPNNYDPTT 186
+ HD + S+ + + ++ ++ Y N P + YNN
Sbjct: 242 YHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQAAPRVRFGQVHVYNN-------- 293
Query: 187 SQNNNISQYMPNNTSQNNNNTQYNPNSSQN----MPNNISQNANNTQNNPNNSHYNPNNI 242
Y +TS ++ Y ++ NN+ + + +
Sbjct: 294 --------YYEGSTSSSSYPFSYAWGIGKSSKIYAQNNVIDVPGLSAAKTISVFSGGTAL 345
Query: 243 QNNPNNFSQNNISQNNTNNTQINKTTQYNPPPYPININKENTPAWLTNSA 292
++ N N + ++ + + P + N + + N A
Sbjct: 346 YDSGTLL--NGTQINASAANGLSSSVGWTPSLHGSIDASANVKSNVINQA 393
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding,
viral protein; HET: ATP; 2.15A {Bacillus phage PHI29}
PDB: 3suc_A*
Length = 772
Score = 34.9 bits (79), Expect = 0.16
Identities = 28/170 (16%), Positives = 48/170 (28%), Gaps = 7/170 (4%)
Query: 136 YDILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQY 195
+I+ SN + N N V I+ + ++ Q+
Sbjct: 297 KNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETVVSVQF 356
Query: 196 MPNNTSQNNNNTQYNPNSSQNMP----NNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQ 251
N S N NS + + N + NNS +I + N S
Sbjct: 357 RARNCSLNGVVLTGFSNSENGIYVIGGSRGGDAVNISNVTLNNSGRYGVSIGSGIENVSI 416
Query: 252 NN---ISQNNTNNTQINKTTQYNPPPYPININKENTPAWLTNSATDGDTT 298
N I + + T NP ++ T A + + + T
Sbjct: 417 TNISGIGDGINSPVALVSTINSNPEISGLSSIGYPTVARVAGTDYNDGLT 466
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription,
multi-protein complex, DNA- binding, magnesium; 3.65A
{Schizosaccharomyces pombe}
Length = 1752
Score = 34.7 bits (79), Expect = 0.19
Identities = 27/166 (16%), Positives = 65/166 (39%), Gaps = 11/166 (6%)
Query: 142 NPANSMLANNSMVSTNNAVYVNQNPHNNN--PNISQYNNPNNYDPTTSQNNNIS-QYMPN 198
+ + +S + + Y+ +P + P+ S + +Y PT+ + S Y
Sbjct: 1552 GLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSP--SYSPTSPSYSPTSPSYSAT 1609
Query: 199 NTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNN 258
+ S + + Y+P S P + S + + +P + Y+P + +P + S + S +
Sbjct: 1610 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1669
Query: 259 TNNTQINKTTQYNPPPYPININ------KENTPAWLTNSATDGDTT 298
+ + T + P + + +P++ S + T+
Sbjct: 1670 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1715
Score = 33.1 bits (75), Expect = 0.63
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 181 NYDPTTSQNNNIS-QYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNP 239
+Y PT+ + S Y P + S + + Y+P S P + S + + +P + Y+P
Sbjct: 1654 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1713
Query: 240 NNIQNNPN--NFSQNNISQNNTNNTQINKTTQYNP 272
+ +P ++S + S + T+ + + Y+P
Sbjct: 1714 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1748
Score = 32.4 bits (73), Expect = 1.0
Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Query: 141 SNPANSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNIS-QYMPNN 199
++P+ S + S + Y +P + + S +Y PT+ + S Y P +
Sbjct: 1651 TSPSYS--PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1708
Query: 200 TSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNN 241
S + + Y+P S P + S + + +P + Y+P +
Sbjct: 1709 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1750
>4dlo_A Brain-specific angiogenesis inhibitor 3; GAIN domain, includes GPS
motif, autoproteolytic fold, extra signaling protein;
HET: NAG FUL; 2.30A {Homo sapiens}
Length = 382
Score = 33.7 bits (75), Expect = 0.27
Identities = 18/165 (10%), Positives = 40/165 (24%), Gaps = 20/165 (12%)
Query: 164 QNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQNMPNNISQ 223
N + N + + + P + + N +P +I
Sbjct: 194 GMMDFQNSYLMTGNVVASIQKLPAASVLTDINFPMKGRKGMVDWARNSEDRVVIPKSIFT 253
Query: 224 NANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNTNN----TQINKTTQYNPPPYPINI 279
++ + + ++ + N + + N+ I + I +
Sbjct: 254 PVSSKELDESSVFVLGAVLYKNLDLILPTLRNYTVINSKIIVVTIRPEPKTTDSFLEIEL 313
Query: 280 NKENTP-------AWLTNSATDGDTTWFPTG---------HTTCL 308
W + + TW G HT CL
Sbjct: 314 AHLANGTLNPYCVLWDDSKTNESLGTWSTQGCKTVLTDASHTKCL 358
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase,
phosphorylation, transferase-antibiotic COMP; HET: ANP
B31; 2.10A {Enterococcus faecalis} PDB: 2b0q_A* 1l8t_A*
3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Length = 263
Score = 33.1 bits (75), Expect = 0.38
Identities = 9/54 (16%), Positives = 17/54 (31%), Gaps = 2/54 (3%)
Query: 414 LQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTDYVSTRW 467
L+ F H D+ N+ ++ D G + R+ + D
Sbjct: 174 LKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG--RADKWYDIAFCVR 225
>1i5p_A Pesticidial crystal protein CRY2AA; helical bundle, beta prism,
lectin-like beta sandwich, jelly roll, toxin; 2.20A
{Bacillus thuringiensis serovarkurstaki} SCOP: b.18.1.3
b.77.2.1 f.1.3.1
Length = 633
Score = 33.4 bits (75), Expect = 0.39
Identities = 23/173 (13%), Positives = 56/173 (32%), Gaps = 7/173 (4%)
Query: 113 YPTVKNTLTLNVLPQPVTLYSHDYDILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPN 172
+ + LNV V+++S + ++ S +
Sbjct: 241 MLEFRTYMFLNVFEY-VSIWSL-FKYQSLMVSSGANLYASGSGPQQTQSFTAQNWPFLYS 298
Query: 173 ISQYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQ-NMPNNISQNANNTQNN 231
+ Q N +NY + +S PN + T ++ NS++ N +S N
Sbjct: 299 LFQVN--SNYILSGISGTRLSITFPNIGGLPGSTTTHSLNSARVNYSGGVSSGLIGATN- 355
Query: 232 PNNSHYNPNNIQNNPNNFSQNNISQNNTNNTQINKTTQYNPPPYPININKENT 284
N ++N + + + + + T+ + +T + + ++
Sbjct: 356 -LNHNFNCSTVLPPLSTPFVRSWLDSGTDREGVATSTNWQTESFQTTLSLRCG 407
>1nmb_N N9 neuraminidase; complex (hydrolase-immunoglobulin), complex
(hydrolase- immunoglobulin) complex; HET: NAG BMA MAN;
2.20A {Influenza a virus} SCOP: b.68.1.1
Length = 470
Score = 32.7 bits (74), Expect = 0.62
Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Query: 233 NNSHYNPNNIQNNPNNFSQNNISQNNTNNTQINKTT---QYNPPPYPININK 281
+ + + + + + + N N TN TQI+ T + N+ K
Sbjct: 39 PSCNCSRSQPEATNASQTIINNYYNETNITQISNTNIQVEERASREFNNLTK 90
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase,
kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP:
d.144.1.6
Length = 264
Score = 32.3 bits (73), Expect = 0.63
Identities = 8/56 (14%), Positives = 11/56 (19%), Gaps = 6/56 (10%)
Query: 421 HRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD----YVSTRWYRAPE 472
H D N++ D G + Y D E
Sbjct: 182 EDLVVTHGDACLPNIMVENGRFSGFIDCGRLG--VADRYQDIALATRDIAEELGGE 235
>3syj_A Adhesion and penetration protein autotransporter; bacterial
aggregation and biofilm formation, SELF-associatin
autotransporter (SAAT); 2.20A {Haemophilus influenzae}
Length = 1011
Score = 32.8 bits (73), Expect = 0.76
Identities = 23/161 (14%), Positives = 48/161 (29%), Gaps = 16/161 (9%)
Query: 150 NNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQY 209
N + + Y ++ + S Y N T S N+N + + +
Sbjct: 249 NGFQLVRKS--YFDEIFERDLHT-SLYTRAGNGVYTISGNDNGQGSITQKSGIPSEIKIT 305
Query: 210 NPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFS-------QNNISQNN---- 258
N S + + N + PN NN + ++I+Q
Sbjct: 306 LANMSLPLKEKDKVH-NPRYDGPNIYSPRLNNGETLYFMDQKQGSLIFASDINQGAGGLY 364
Query: 259 -TNNTQINKTTQYNPPPYPININKENTPAWLTNSATDGDTT 298
N ++ + I++++ +T W N +
Sbjct: 365 FEGNFTVSPNSNQTWQGAGIHVSENSTVTWKVNGVEHDRLS 405
Score = 30.9 bits (68), Expect = 2.5
Identities = 17/172 (9%), Positives = 42/172 (24%), Gaps = 5/172 (2%)
Query: 145 NSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNN 204
S + + ++ N + + N + + + +
Sbjct: 295 KSGIPSEIKITLANMSLPLKEKDKVHNPRYDGPNIYSPRLNNGETLYFMDQKQGSLIFAS 354
Query: 205 NNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNTNNTQI 264
+ Q +S N+N T + + N + +S+ +
Sbjct: 355 DINQGAGGLYFEGNFTVSPNSNQTWQGAGIHVSENSTVTWKVNGVEHDRLSKIGKGTLHV 414
Query: 265 NKTTQYNPPPYPININKENTPAWLTNSATDGDTTWFPTGHTTCLLAGTERLK 316
+ +I+ + L A D + GT +L
Sbjct: 415 QAKGENK-----GSISVGDGKVILEQQADDQGNKQAFSEIGLVSGRGTVQLN 461
Score = 29.3 bits (64), Expect = 7.7
Identities = 16/151 (10%), Positives = 36/151 (23%), Gaps = 2/151 (1%)
Query: 115 TVKNTLTLNVLPQPVTLYSHDYDILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPNIS 174
+ ++ ++ + N+ S + N N N+ +
Sbjct: 767 HLTDSAQFSLKNSHFSHQIQGDKGTTVTLENATWTMPSDTTLQNLTLNNSTITLNSAYSA 826
Query: 175 QYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQN--MPNNISQNANNTQNNP 232
NN ++ S NT N + S + +
Sbjct: 827 SSNNTPRRRSLETETTPTSAEHRFNTLTVNGKLSGQGTFQFTSSLFGYKSDKLKLSNDAE 886
Query: 233 NNSHYNPNNIQNNPNNFSQNNISQNNTNNTQ 263
+ + N P Q + ++ N
Sbjct: 887 GDYILSVRNTGKEPETLEQLTLVESKDNQPL 917
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 31.5 bits (70), Expect = 0.78
Identities = 7/30 (23%), Positives = 14/30 (46%), Gaps = 5/30 (16%)
Query: 784 AIHLMESMLA-YNPSKRPTAQQSLSIKREV 812
A+ +++ L Y P +L+IK +
Sbjct: 21 ALKKLQASLKLYADDSAP----ALAIKATM 46
>3p1u_A SUSD homolog; structural genomics, joint center for structural
genomics, J protein structure initiative, PSI-biology;
2.05A {Parabacteroides distasonis atcc 8503}
Length = 529
Score = 32.6 bits (73), Expect = 0.79
Identities = 17/102 (16%), Positives = 33/102 (32%), Gaps = 9/102 (8%)
Query: 178 NPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPN--SSQNMPNNISQNANNTQNNPNNS 235
NP+ PT N N+++ +T + + N + SQ +
Sbjct: 4 NPDK--PTDDVNYNMNEPRLASTLRGGLIIEGNVEQRLKPLQIDFYSQMTVDGGGW-GTK 60
Query: 236 HYNPNNIQNNPNNFSQNNISQN-NTNNTQINKTTQYNPPPYP 276
+Y + + NN + + N I T+ + Y
Sbjct: 61 NYIQD---DEWNNLVWEEYLKQIASINIVIRSLTEKDKDAYA 99
>3bqz_B HTH-type transcriptional regulator QACR; multidrug resistance,
TETR, malachite green, DNA- binding, plasmid, repressor;
HET: MGR; 2.17A {Staphylococcus aureus} PDB: 3br1_B*
3br3_B* 3pm1_B* 1rkw_B* 1jt0_A* 1jty_B* 1jum_B* 1jup_B*
1jtx_B* 1jus_B* 2dtz_B 2gby_B* 2hq5_B 3br2_B* 3br5_B*
1qvt_B* 1qvu_B* 3br0_B* 3br6_B* 1jt6_B* ...
Length = 194
Score = 31.6 bits (72), Expect = 0.88
Identities = 7/55 (12%), Positives = 16/55 (29%), Gaps = 2/55 (3%)
Query: 372 VIRENDT--LYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFMHRHG 424
ND + + + +++ ++ L GL+ H H
Sbjct: 139 EWSINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLSKHHHHH 193
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin,
peptidoglycan-anchor secreted, virulence, cell adhesion;
1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A
3is0_X 3is1_X
Length = 429
Score = 32.0 bits (71), Expect = 0.91
Identities = 21/177 (11%), Positives = 62/177 (35%), Gaps = 7/177 (3%)
Query: 110 RSIYPTVKNTLTLNVLPQPVTLYSHDYDILLSNPANSMLANNSMVSTNNA---VYVNQNP 166
+ + T K ++ + + Y+ + N ++++ + ++ + A Y+NQN
Sbjct: 124 KELVTTDKQSVPVGITVAGED-YTQNVIFNYGNRTVPVISDINYLTKDFAEFTTYINQNR 182
Query: 167 HNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQNMPNNISQNAN 226
N + + T+ + + + N+ +++ + Y + P I +
Sbjct: 183 AFNT-GSKVRLSGQGFKFTSPDEIEVYKVLNNSQFRDSFSPDYANLTQVRNPKIIINSDG 241
Query: 227 NTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNTNNTQINKTTQYNPPPYPININKEN 283
+ + + I++ PN + + S ++ T N + +
Sbjct: 242 SATVDLGDIGTLGYIIRSKPN--TLPDFSGIGVLKSEYTFTNNKNQRDTRAHASSIQ 296
>2iny_A Hexon protein, late protein 2; avian adenovirus, CELO, major coat
protein, crystal P nanotechnology, viral jelly roll,
viral protein; 3.90A {Fowl adenovirus 1}
Length = 942
Score = 32.2 bits (73), Expect = 0.93
Identities = 15/115 (13%), Positives = 25/115 (21%), Gaps = 14/115 (12%)
Query: 197 PNNT--SQNNNNTQYN---PNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQ 251
NT T N N N N+ + N N S+
Sbjct: 135 IFNTWVESTGPQTNVVGQMTNVYTNQTRNDKTATLQQVNSISGVVPNVNLGPGLSQLASR 194
Query: 252 NNISQNNTNNTQINKTTQYNPPPY-----PININ----KENTPAWLTNSATDGDT 297
++ + Y P+ + T WL ++
Sbjct: 195 ADVDNIGVVGRFAKVDSAGVKQAYGAYVKPVKDDGSQSLNQTAYWLMDNGGTNYL 249
>2qih_A Protein USPA1; trimeric, parallel alpha-helical coiled-coil, cell
adhesion; 1.90A {Moraxella catarrhalis}
Length = 157
Score = 31.1 bits (69), Expect = 1.0
Identities = 19/131 (14%), Positives = 42/131 (32%), Gaps = 12/131 (9%)
Query: 139 LLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMPN 198
+ ++ AN ++T + + I++ N D +I
Sbjct: 6 HHHHHGSATSANTDRIATAEL---GIAENKKDAQIAKAQANENKDGIAKNQADIQ----L 58
Query: 199 NTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNN 258
+ + N + ++ + NN A N + N +I NN N Q +
Sbjct: 59 HDKKITNLGILHSMVARAVGNNTQGVATNKADIAKNQ----ADIANNIKNI-YELAQQQD 113
Query: 259 TNNTQINKTTQ 269
+++ I +
Sbjct: 114 QHSSDIKTLAK 124
Score = 30.3 bits (67), Expect = 1.5
Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 11/129 (8%)
Query: 148 LANNSMVSTNNAVYVNQNPHN---NNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNN 204
+A N + N+N N +I + ++ +++ + NNT
Sbjct: 28 IAENKKDAQIAKAQANENKDGIAKNQADIQ--LHDKKITNLGILHSMVARAVGNNTQGVA 85
Query: 205 NNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQN--NISQNNTNNT 262
N + ++N +I+ N N + ++I+ + N I++N
Sbjct: 86 TNKA---DIAKNQ-ADIANNIKNIYELAQQQDQHSSDIKTLAKVSAANTDRIAKNKAEAD 141
Query: 263 QINKTTQYN 271
+T N
Sbjct: 142 ASFETLTKN 150
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase;
endopeptidase activity, protein kinase activity; HET:
TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A*
2vwb_A*
Length = 540
Score = 31.9 bits (73), Expect = 1.1
Identities = 11/45 (24%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 408 NMMYQVLQGLAFMHRHGFFHRDMKPENLLCMGTELVKIADFGLAR 452
++ Y++ + + +H++ H D+ N + +L I DFGL +
Sbjct: 435 DIAYKIGEIVGKLHKNDVIHNDLTTSNFIF-DKDLYII-DFGLGK 477
>4fev_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine,
PP1, protein kinase inhibitor; HET: KAN PP1; 1.89A
{Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A*
4ej7_A* 3r78_A*
Length = 272
Score = 31.5 bits (71), Expect = 1.1
Identities = 9/41 (21%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 421 HRHGFFHRDMKPENLLCMGTELVKIADFGLAREIRSRPYTD 461
H D +NL+ +L+ D G + Y D
Sbjct: 191 PDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG--IADRYQD 229
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi}
SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Length = 361
Score = 31.7 bits (71), Expect = 1.3
Identities = 18/147 (12%), Positives = 38/147 (25%), Gaps = 23/147 (15%)
Query: 145 NSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQ-------------NNN 191
NS++ + N + +++ +NN ++ NN
Sbjct: 200 NSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNN---VFNRVTERAPRVRYGSIHSFNNV 256
Query: 192 ISQYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQ 251
+ + + + S N AN + + N + FS
Sbjct: 257 FKGDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIANLSASKACKVVKK-----FNGSIFSD 311
Query: 252 NNISQNNTNNTQINK--TTQYNPPPYP 276
N N + + + PY
Sbjct: 312 NGSVLNGSAVDLSGCGFSAYTSKIPYI 338
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP:
d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
Length = 939
Score = 31.7 bits (71), Expect = 1.4
Identities = 24/275 (8%), Positives = 65/275 (23%), Gaps = 33/275 (12%)
Query: 175 QYNNPNNYDPTTSQNNNISQYMP--NNTSQNNNNTQYNPNSSQNMPNNISQN-------A 225
+Y + + +P + N +Y+ + + ++ +
Sbjct: 378 RYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYIS 437
Query: 226 NNTQNNPNNSHYN-PNNIQNNPNNFSQNNISQNNTNNTQINKTTQYNPPPYPININKENT 284
+N + P + + + + + Y P + + +++
Sbjct: 438 PKEPHNKTAYFVDAPYQVDKISAQTFADWQKKAADIALSLPELNPYIPDDFSLIKSEKKY 497
Query: 285 PAWLTNSATDGDTTWF---------PTGHTTCLLAGTERLK----------FSYILPHTL 325
+ P + +L + + Y+ L
Sbjct: 498 DHPELIVDESNLRVVYAPSRYFASEPKADVSLILRNPKAMDSARNQVMFALNDYLAGLAL 557
Query: 326 PLYTCNLDQDNHILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTLYFVFEY 385
+ S + ++ + Y + L +L L E E
Sbjct: 558 DQLSNQASVGGISFSTNANNGLMVNANGYTQRLPQL----FQALLEGYFSYTATEDQLEQ 613
Query: 386 MKENLYQLIRDRDKFLPESIIRNMMYQVLQGLAFM 420
K Q++ +K + Q F
Sbjct: 614 AKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFS 648
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics,
center for structural genomics, JCSG; HET: MSE EPE;
1.35A {Bacteroides fragilis nctc 9343}
Length = 528
Score = 31.3 bits (71), Expect = 1.6
Identities = 14/147 (9%), Positives = 43/147 (29%), Gaps = 29/147 (19%)
Query: 180 NNYDPTTSQNNNIS----QYMPNNTSQNNNNTQYNPNSSQNMPNNISQN-------ANNT 228
+ P+T +N + QY+ N + N + + + T
Sbjct: 238 ELFYPSTGTSNKENIFYIQYLENYLGTGLPQHALSAKDGGWSLVNPAADLYESYEFKDGT 297
Query: 229 QNNPNNSHYNPNNIQNN----------------PNNFSQNNISQNNTNNTQINKTTQYNP 272
+ ++ Y+P+N+ + + + + +++ T++ +
Sbjct: 298 PFSYDDPRYDPSNLGKDRDPRLDYTIYYNGAIFMGTEYKMSPDYSAAKKEKLDYTSEASR 357
Query: 273 PPYPININKENTPAWLTNSATDGDTTW 299
+ + K + N +
Sbjct: 358 TGF--MMRKYFEESTPINDVQSANGLT 382
>2gqb_A Conserved hypothetical protein; hypothetical protein conserved
unknown protein, structural genomics, PSI; NMR
{Rhodopseudomonas palustris} SCOP: a.282.1.1
Length = 130
Score = 29.7 bits (66), Expect = 1.8
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 907 LKLARLEWELKQRKELADECSLVERENESVAANINKKRGQLDNLA 951
+K ++ L RKELA E N+S + NI + + L
Sbjct: 74 MKALDIDSSLSARKELAKELGYSGDMNDSASMNIWLHKQVMSKLV 118
>3mx3_A SUSD homolog; structural genomics, joint center for structural
genomics, J protein structure initiative, PSI-2, unknown
function; HET: MSE EPE; 2.00A {Bacteroides fragilis}
Length = 490
Score = 31.3 bits (70), Expect = 1.8
Identities = 11/119 (9%), Positives = 31/119 (26%), Gaps = 21/119 (17%)
Query: 168 NNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANN 227
N +P+ + + ++ S++ + ++ M ++ +
Sbjct: 11 NTDPD-----ATTKVTSSLLATGLLLDITSSSASKSFIYDEL---LAKQMAWG--ESMED 60
Query: 228 TQNNP-NNSHYNPNNIQNNPNNFSQNNISQNNTNNTQINK----------TTQYNPPPY 275
Q N S + N ++ N + + + PY
Sbjct: 61 YQYNVFGRSGFGGYTTLINAQKMVESVSDDNVNAYDGLAHFIKAYKIFYMSMEMGDLPY 119
>2g8g_A Capsid; adeno-associated virus serotype 4, gene therapy,
icosahedral virus; HET: D5M; 3.20A {Adeno-associated
virus - 4}
Length = 524
Score = 31.3 bits (70), Expect = 2.0
Identities = 14/137 (10%), Positives = 39/137 (28%), Gaps = 4/137 (2%)
Query: 100 REAASEHISARSIYPTVKNTLTLNVLPQPVTLYSHDYDILLSNPANSMLANNSMVSTNNA 159
++ + ++ + +L TL + P + +S S +
Sbjct: 269 KQQGFSKTANQNYKIPATGSDSLIKYETHSTLDGRWSALTPGPPMATAGPADSKFSNSQL 328
Query: 160 VY-VNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMP---NNTSQNNNNTQYNPNSSQ 215
++ + N + + + + + + S +N T +
Sbjct: 329 IFAGPKQNGNTATVPGTLIFTSEEELAATNATDTDMWGNLPGGDQSNSNLPTVDRLTALG 388
Query: 216 NMPNNISQNANNTQNNP 232
+P + QN + P
Sbjct: 389 AVPGMVWQNRDIYYQGP 405
>2nyy_A Botulinum neurotoxin type A; neurotoxin, FAB, protein antibody
complex, toxin- system complex; 2.61A {Clostridium
botulinum} PDB: 2nz9_A 3bta_A 3v0a_A* 3v0b_A 3v0c_A
3zus_A 3zur_A
Length = 1295
Score = 31.4 bits (70), Expect = 2.0
Identities = 27/178 (15%), Positives = 57/178 (32%), Gaps = 25/178 (14%)
Query: 130 TLYSHDYDILLSNPANSMLAN-----NSMVSTNNAVYVNQNPHNNNPNISQYNNPNNY-- 182
T + D + N + N + A + QN NN N ++ N
Sbjct: 364 TYLNFDKAVFKINIVPKVNYTIYDGFNLRNTNLAANFNGQNTEINNMNFTKLKNFTGLFE 423
Query: 183 ------------DPTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQNMPNNISQN---ANN 227
T S + ++ + + + NN + S N N++++ ++
Sbjct: 424 FYKLLCVRGIITSKTKSLDKGYNKALNDLCIKVNNWDLFFSPSEDNFTNDLNKGEEITSD 483
Query: 228 TQNNPNNSHYNPNNIQNNPNNFSQNNISQN---NTNNTQINKTTQYNPPPYPININKE 282
T + + + IQ F+ +N +N ++ I + P K+
Sbjct: 484 TNIEAAEENISLDLIQQYYLTFNFDNEPENISIENLSSDIIGQLELMPNIERFPNGKK 541
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A
{Staphylococcus aureus} SCOP: b.47.1.1
Length = 268
Score = 30.8 bits (69), Expect = 2.0
Identities = 24/119 (20%), Positives = 38/119 (31%), Gaps = 15/119 (12%)
Query: 133 SHDYDILLSNPANS---ML-ANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQ 188
+D NS + N ++ + N+ N + N +
Sbjct: 159 QYDLST---TGGNSGSPVFNEKNEVIGIHWGGVPNEFNGAVFINENVRNFLKQNIEDINF 215
Query: 189 NNNISQYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPN 247
N+ P+N NN N N P+N NNP+N NN +NP+
Sbjct: 216 ANDDQPNNPDNPDNPNNPDNPNNPDEPNNPDN--------PNNPDNPDNGDNNNSDNPD 266
>2w2d_B Bontoxilysin-A, botulinum neurotoxin A heavy chain;
metalloprotease, membrane domain, protein engineering,
neuro metal-binding; 2.59A {Clostridium botulinum}
Length = 431
Score = 30.6 bits (68), Expect = 2.6
Identities = 18/147 (12%), Positives = 44/147 (29%), Gaps = 8/147 (5%)
Query: 138 ILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMP 197
I ++N + + N + + ++ + N + P
Sbjct: 9 IKVNNWDLFFSPSED--NFTNDLNKGEEITSDTNIEAAEENISLDLIQQYYLTFNFDNEP 66
Query: 198 NNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQN 257
N S N ++ + MPN + ++ Q + ++ I+
Sbjct: 67 ENISIENLSSDII-GQLELMPNIERFPNGKKYELDKYTMFHYLRAQEFEHG--KSRIALT 123
Query: 258 NTNNTQI---NKTTQYNPPPYPININK 281
N+ N + ++ + Y +NK
Sbjct: 124 NSVNEALLNPSRVYTFFSSDYVKKVNK 150
>3gzs_A Uncharacterized SUSD superfamily protein; structural genomics,
joint center for structural genomics, J protein
structure initiative, PSI-2; 2.09A {Bacteroides
fragilis}
Length = 515
Score = 30.7 bits (68), Expect = 2.6
Identities = 13/112 (11%), Positives = 30/112 (26%), Gaps = 3/112 (2%)
Query: 123 NVLPQPVTLYSHDYDILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPNI-SQYNNPNN 181
+ + Y L N S++ + + V Q N + + Y +P +
Sbjct: 11 LPTKEDEKMDGVIYGAYLPNLEKSVIPIGTASESTEPVNRYQIGVNLAGDAWAGYMSPRD 70
Query: 182 YDPTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPN 233
+ + N + Y N + + + + N
Sbjct: 71 N--KFNGSKNFTNYFMYENWVNYVYSFMVTDVYSPWMQIKRISQDEGTRNDE 120
>3cgh_A SUSD homolog; structural genomics, joint center for structural
genomics, J protein structure initiative, PSI-2; 1.70A
{Bacteroides thetaiotaomicron vpi-5482} SCOP: a.118.8.6
Length = 516
Score = 30.6 bits (68), Expect = 2.6
Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 5/108 (4%)
Query: 178 NPNNYDPTTSQN----NNISQYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPN 233
NP ++ + ++ S + N Q+ ++N
Sbjct: 9 NPYEAPDLSADGYALGSAMNNLAGCVVSPDVNTAQFTDCLLGGPLGGYFADSNAGFTE-T 67
Query: 234 NSHYNPNNIQNNPNNFSQNNISQNNTNNTQINKTTQYNPPPYPININK 281
S++NP + + S I +N TQ+ +Q P P I +
Sbjct: 68 ISNFNPKDDWSRVFLKSDKIIPTLYSNLTQVKLVSQNTNDPVPYAIAQ 115
>3sgh_A SUSD homolog; alpha-alpha superhelix, structural genomics, joint
center FO structural genomics, JCSG, protein structure
initiative; HET: MSE; 1.70A {Bacteroides
thetaiotaomicron}
Length = 499
Score = 30.6 bits (68), Expect = 2.7
Identities = 12/98 (12%), Positives = 26/98 (26%), Gaps = 4/98 (4%)
Query: 178 NPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHY 237
NP P+ +N+ M N + N N + Q + + +
Sbjct: 8 NPYQ--PSKVPASNLLSTMFNVYACPQQNACQEIN--CMWASFSGQVTATANWSFGKNIF 63
Query: 238 NPNNIQNNPNNFSQNNISQNNTNNTQINKTTQYNPPPY 275
N N+ S + + + + +
Sbjct: 64 AYYNASEGHNDSSWGRLYGYIYPSFFLVENSTEKKGVI 101
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding
mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli}
SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Length = 758
Score = 30.7 bits (70), Expect = 3.0
Identities = 20/102 (19%), Positives = 31/102 (30%), Gaps = 33/102 (32%)
Query: 851 LQNLK--YEIFH---LKKEVVK-CLQFKSK--------DEDIDLVDEET-FFKDAPESIS 895
+ LK YE H + V+ ++ K D+ ID++DE + P S
Sbjct: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417
Query: 896 RPEVTKED------------PHQL------KLARLEWELKQR 919
+ V D + L L LK
Sbjct: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML 459
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain,
protein lysine methyltransferase, transferase; HET: SAM;
2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB:
2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Length = 440
Score = 30.6 bits (68), Expect = 3.1
Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 1/80 (1%)
Query: 320 ILPHTLPLYTCNLDQDNHILSRHVSSRDEMVVCFYRKSLKKLSHANLVKLKEVIRENDTL 379
L Y ++QD + ++ SR + V R+ K + ++ E D L
Sbjct: 355 ACKSALAGYHTTIEQDRELKEGNLDSRLAIAVG-IREGEKMVLQQIDGIFEQKELELDQL 413
Query: 380 YFVFEYMKENLYQLIRDRDK 399
+ E ++L + D
Sbjct: 414 EYYQERRLKDLGLCGENGDI 433
>3fdh_A SUSD homolog; structural genomics, joint center for structural
genomics, J protein structure initiative, PSI-2; HET:
PG4; 1.75A {Bacteroides thetaiotaomicron vpi-5482}
Length = 499
Score = 30.2 bits (67), Expect = 3.3
Identities = 19/115 (16%), Positives = 36/115 (31%), Gaps = 6/115 (5%)
Query: 135 DYDILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQ 194
DY+ +L + S + + + A + + +N NP YN+ + +TS +
Sbjct: 219 DYEKVLDYVSKSFTSAD-----DQAAFDIYDSNNINPFYGFYNSRAGFGASTSLGTKLLA 273
Query: 195 YM-PNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNN 248
Y P S + A N + + S Y +
Sbjct: 274 YNDPRANRAFFTPIVDKKRSQVAANDPSLVPAPNGSPDQSTSKYGISAFVYAKTA 328
>2c9k_A Pesticidal crystal protein CRY4AA; toxin, insect toxin,
bioinsecticicide, pore formation, receptor recognition,
sporulation; 2.8A {Bacillus thuringiensis}
Length = 612
Score = 30.2 bits (67), Expect = 3.4
Identities = 17/135 (12%), Positives = 41/135 (30%), Gaps = 7/135 (5%)
Query: 141 SNPANSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNT 200
++ S+ ++ V N + N+ N + + T ++
Sbjct: 340 TDKLKSLGLATNIYIFLLNVISLDNKYLNDYNNISKMDFFITNGTRLLEKELTAG-SGQI 398
Query: 201 SQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNN--SH----YNPNNIQNNPNNFSQNNI 254
+ + N + + + T +N ++ S P + F+ +
Sbjct: 399 TYDVNKNIFGLPILKRREEQGNPTLFPTYDNYSHILSFIKSLSIPATYKTQVYTFAWTHS 458
Query: 255 SQNNTNNTQINKTTQ 269
S + N + TTQ
Sbjct: 459 SVDPKNTIYTHLTTQ 473
>3fip_A Outer membrane usher protein PAPC; beta barrel, protein
translocase, cell membrane, cell outer fimbrium,
transmembrane, transport; 3.15A {Escherichia coli} PDB:
2vqi_A*
Length = 493
Score = 30.3 bits (68), Expect = 3.5
Identities = 11/109 (10%), Positives = 30/109 (27%), Gaps = 7/109 (6%)
Query: 164 QNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQNMP-NNIS 222
+ +S N ++ Q + + +N S +P +
Sbjct: 354 DIRKTDYYTVS-VNR--YFNVFGLQGVAVGLSASRSKYLGRDNDSAYLRIS--VPLGTGT 408
Query: 223 QNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNTNNTQINKTTQYN 271
+ + + +N + N S +++ + + Q N
Sbjct: 409 ASYSGSMSNDRYVNMAGYTDTFNDGLDS-YSLNAGLNSGGGLTSQRQIN 456
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center
for structural genomics, JCSG, protein structure INI
PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Length = 495
Score = 30.2 bits (68), Expect = 3.6
Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 11/70 (15%)
Query: 189 NNNISQYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHY----------- 237
N P + + N Q + + + + + PN+ +Y
Sbjct: 420 VRNAYPEGPIDYIYTDENGQTHTLKKKTQGHRFFNFPDKSAFCPNSKYYLYRITDSEELA 479
Query: 238 NPNNIQNNPN 247
N N +++P
Sbjct: 480 NKNLYKDHPK 489
>4dpv_Z Protein (parvovirus coat protein); complex (virus/DNA), FULL
capsid, single-stranded DNA, icosahedral virus; HET:
DNA; 2.90A {Canine parvovirus} SCOP: b.121.5.2 PDB:
1c8h_A* 1c8d_A 1ijs_P* 1fpv_A 2cas_A 1p5w_A* 1p5y_A
1c8e_A 1c8f_A 1c8g_A
Length = 584
Score = 29.9 bits (66), Expect = 5.2
Identities = 8/132 (6%), Positives = 16/132 (12%), Gaps = 19/132 (14%)
Query: 193 SQYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNF--- 249
+ N N + N
Sbjct: 275 LTHTWQTNRALGLPPFLNSLPQSEGATNFGDIGVQQDKRRGVTQMGNTNYITEATIMRPA 334
Query: 250 ------SQNNISQNNTNN----------TQINKTTQYNPPPYPININKENTPAWLTNSAT 293
+ + Q +++ T T
Sbjct: 335 EVGYSAPYYSFEASTQGPFKTPIAAGRGGAQTDENQAADGNPRYAFGRQHGQKTTTTGET 394
Query: 294 DGDTTWFPTGHT 305
T+ T
Sbjct: 395 PERFTYIAHQDT 406
>3ffz_A Botulinum neurotoxin type E; botulinum neurotoxin serotype E,
botulism, domain organization, endopeptidase,
translocation, hydrolase; 2.65A {Clostridium botulinum}
Length = 1252
Score = 29.8 bits (66), Expect = 5.3
Identities = 17/117 (14%), Positives = 39/117 (33%), Gaps = 7/117 (5%)
Query: 158 NAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQNM 217
N + N + NN + ++ + + + ++ N + Q
Sbjct: 1090 NVLKPNNFIDRRKDSTLSINNIRSTILLANRLYSGIKVKIQRVNNSSTNDNLVRKNDQVY 1149
Query: 218 PNNISQNANNTQNNPNNSHYNPNN---IQNNPNNFSQ----NNISQNNTNNTQINKT 267
N ++ + + + N I ++ N F+Q N++ N T N + N
Sbjct: 1150 INFVASKTHLFPLYADTATTNKEKTIKISSSGNRFNQVVVMNSVGNNCTMNFKNNNG 1206
>3lat_A Bifunctional autolysin; amidase, ATLE, peptidoglycan hydrolase,
cell WALL biogenesis/degradation, multifunctional
enzyme, secreted; 1.70A {Staphylococcus epidermidis}
Length = 213
Score = 29.0 bits (64), Expect = 5.5
Identities = 15/91 (16%), Positives = 26/91 (28%), Gaps = 11/91 (12%)
Query: 154 VSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPN- 212
VS+ + + N +I+ Y N + + + Y P N P
Sbjct: 1 VSSQKTSSLPKYTPKVNSSINNYIRKKNMKAPRIE-EDYTSYFPKY---GYRNGVGRPEG 56
Query: 213 ----SSQNMPNNISQNANNTQNNPNN--SHY 237
+ N + I + N N H
Sbjct: 57 IVVHDTANDNSTIDGEIAFMKRNYTNAFVHA 87
>2cki_A Ulilysin; metalloprotease, hydrolase; HET: ARG; 1.7A
{Methanosarcina acetivorans} PDB: 2j83_A* 3lum_A*
3lun_A*
Length = 262
Score = 29.2 bits (64), Expect = 5.6
Identities = 17/152 (11%), Positives = 35/152 (23%), Gaps = 11/152 (7%)
Query: 158 NAVYVNQNP--HNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQ 215
N + N S + + + T + T + +
Sbjct: 35 NKDFRKLNSDVSQVPSVWSNLIADLGIEFFLATKDPNGNQTTGITRTQTSVTFFTTSDEV 94
Query: 216 NMPNNISQNA--NNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNTNNTQINKTTQYNPP 273
++ ++A + N H + I + ++Q T+ I
Sbjct: 95 KFASSGGEDAWPADRYLNIWVCHVLKSEIGQDILGYAQFPGGPAETDGVVIVDAAFGTTG 154
Query: 274 PYPININKENTPAWLTNSATDGDTTWFPTGHT 305
P +AT W H
Sbjct: 155 TA-------LPPFDKGRTATHEIGHWLNLYHI 179
>3rqi_A Response regulator protein; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET: PHD
CIT; 1.70A {Burkholderia pseudomallei}
Length = 184
Score = 28.8 bits (65), Expect = 5.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 895 SRPEVTKEDPHQLKLARLEWELKQR 919
+ E E+P L + RLEWE QR
Sbjct: 126 VQAEEALENPVVLSVDRLEWEHIQR 150
>3ult_A ICE recrystallization inhibition protein-like Pro; beta-solenoid,
beta-roll, ICE-binding, antifreeze, extracellular,
antifreeze protein; HET: EDO; 1.40A {Lolium perenne}
Length = 133
Score = 28.5 bits (63), Expect = 5.8
Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 11/125 (8%)
Query: 150 NNSMVSTNNAV---YVNQNPHNNNPNISQYNN--PNNYDPTTSQNNNI---SQYMP---N 198
N++ +NN V N N+N IS NN + + S N+N S ++ N
Sbjct: 5 PNTISGSNNTVRSGSKNVLAGNDNTVISGDNNSVSGSNNTVVSGNDNTVTGSNHVVSGTN 64
Query: 199 NTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNN 258
+ +NNN +++ + + +NT + NN+ N++ + N +
Sbjct: 65 HIVTDNNNNVSGNDNNVSGSFHTVSGGHNTVSGSNNTVSGSNHVVSGSNKVVTDAAKLAA 124
Query: 259 TNNTQ 263
Sbjct: 125 ALEHH 129
>3aj6_A Main hemagglutinin component; toxin, beta-trefoil; HET: NGA; 1.48A
{Clostridium botulinum} PDB: 1qxm_A 3aj5_A* 2ehm_A*
2ehi_A* 2ehn_A* 3ah1_A* 3ah2_A* 3ah4_A* 2e4m_A
Length = 286
Score = 29.0 bits (64), Expect = 6.5
Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 10/110 (9%)
Query: 130 TLYSHDYDILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNNPNNYDPTTSQN 189
+ + + + P +S+ N Y+ QN + N I Y NPN +
Sbjct: 63 VMDNTSLILTWNAPLSSVSVKTDTNGDNQYWYLLQNYISRNVIIRNYMNPNLVLQYNIDD 122
Query: 190 NNISQYMPNNTSQ----------NNNNTQYNPNSSQNMPNNISQNANNTQ 229
+ ++++Q NN + N +S+N N+
Sbjct: 123 TLMVSTQTSSSNQFFKFSNCIYEALNNRNCKLQTQLNSDRFLSKNLNSQI 172
>3rsj_A BONT/F; clostridium botulinum type F, ganglioside binding site,
GD1A; HET: NGA GAL SIA; 2.00A {Clostridium botulinum}
PDB: 3fuq_A
Length = 413
Score = 29.1 bits (64), Expect = 6.9
Identities = 25/176 (14%), Positives = 53/176 (30%), Gaps = 11/176 (6%)
Query: 98 LKREAASEHISARSIYPTVKNTLTLNVLPQPVTLYSHDYDILLSNPANSMLANNSMVSTN 157
E I ++Y + L LY+ Y +L N + + S+ +
Sbjct: 203 FDTELGKTEIE--TLYSDEPDPSILKDFWGNYLLYNKRYYLL-----NLLRTDKSITQNS 255
Query: 158 NAVYVNQNPHNNNPNISQYNNPNNYD--PTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQ 215
N + +N + ++N Y + N + + N+ Y +
Sbjct: 256 NFLNIN-QQRGVYQKPNIFSNTRLYTGVEVIIRKNGSTDISNTDNFVRKNDLAYINVVDR 314
Query: 216 NMPNNISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNN-TNNTQINKTTQY 270
++ + + + + +N N+ + NN T N Q N
Sbjct: 315 DVEYRLYADISIAKPEKIIKLIRTSNSNNSLGQIIVMDSIGNNCTMNFQNNNGGNI 370
>3ehm_A SUSD homolog; glycan binding, mucin O-glycan binding,
tetratrico-peptide repeat, sugar binding protein; 2.00A
{Bacteroides thetaiotaomicron} PDB: 3ehn_A*
Length = 532
Score = 29.1 bits (64), Expect = 7.3
Identities = 18/114 (15%), Positives = 28/114 (24%)
Query: 162 VNQNPHNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQNMPNNI 221
VN NP+ + Q T N+ + SS N
Sbjct: 8 VNTNPYGVSDGELGPLKYGARFMNMQQRVIPIGSPSLTTGPGNDLQNTDLISSGNYIGYF 67
Query: 222 SQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNTNNTQINKTTQYNPPPY 275
N N NN N ++ + + NF N + +
Sbjct: 68 GNNNNWGFNNEANWNFTDSRMNYAYQNFYSQIFLPWNEIYEIAKDSDSPSEQAI 121
>2ve7_A Kinetochore protein HEC1, kinetochore protein SPC; mitosis,
centromere, cell cycle, microtubule, C division,
calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_C*
Length = 315
Score = 29.0 bits (64), Expect = 7.4
Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 6/147 (4%)
Query: 786 HLMESMLAYNPSKRPTAQQSLSIKREVSLSFVLLKKLNRLEKYRLKNARETLQAKKSKVD 845
E A + S++ + + +L + K E L+ + D
Sbjct: 168 MNAELQSKLKDLFNVDAFKLESLEAKNRALNEQIARLEQERSTANKANAERLKRLQKSAD 227
Query: 846 SFNLQLQNLKYEIFHLKKEVVKCLQFKSKDEDIDLVDEETFFKDAPESISRPEVTKEDPH 905
+ ++K + LQF + D + F EV+ PH
Sbjct: 228 LYK------DRLGLEIRKIYGEKLQFIFTNIDPKNPESPFMFSLHLNEARDYEVSDSAPH 281
Query: 906 QLKLARLEWELKQRKELADECSLVERE 932
LA + +++ + + V +
Sbjct: 282 LEGLAEFQENVRKTNNFSAFLANVRKA 308
>2qkg_A Insecticidal delta-endotoxin CRY8EA1; 2.30A {Bacillus
thuringiensis} PDB: 3eb7_A
Length = 589
Score = 29.0 bits (64), Expect = 8.1
Identities = 18/164 (10%), Positives = 43/164 (26%), Gaps = 13/164 (7%)
Query: 119 TLTLNVLPQPVTLYSHDYDILLSNPANSMLANNSMVSTNNAVYVNQNPHNNNPNISQYNN 178
T + + I S+ ++ ++V Q ++ + +
Sbjct: 287 TGRSSFSASNYLKKWIGHQISSQPIGGSIQTQTYGTTSGSSVIATQQIGFTGFDVYKTLS 346
Query: 179 PNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPNSSQNMPNNISQNANNTQNNPNNSHYN 238
+ + + +N + + +Q ++ P +
Sbjct: 347 TAGVLFAYTSKYYGVSKVVFDAIYPDNKYKTTFTYNPGSEGIGAQEKDSEVELPPETLDQ 406
Query: 239 PNNIQ-------------NNPNNFSQNNISQNNTNNTQINKTTQ 269
PN + FS + S + TN +K TQ
Sbjct: 407 PNYEAYSHRLNYVTFIRNPDVPVFSWTHRSADRTNTVYSDKITQ 450
>4a15_A XPD helicase, ATP-dependent DNA helicase TA0057; hydrolase,
nucleotide excision repair,; 2.20A {Thermoplasma
acidophilum} PDB: 2vsf_A*
Length = 620
Score = 29.3 bits (66), Expect = 8.1
Identities = 9/44 (20%), Positives = 15/44 (34%), Gaps = 7/44 (15%)
Query: 331 NLDQDNHILSRHVSSRDEMV-------VCFYRKSLKKLSHANLV 367
D+ L + + +E VC Y L A++V
Sbjct: 136 RSDETKRFLFDELPTAEEFYDYGERNNVCPYESMKAALPDADIV 179
>3ckc_A SUSD; TPR repeat, carbohydrate binding, starch binding, sugar BIND
protein; HET: MES; 1.50A {Bacteroides thetaiotaomicron}
SCOP: a.118.8.6 PDB: 3ck8_A* 3ck9_A* 3ckb_A* 3ck7_A*
Length = 527
Score = 29.0 bits (65), Expect = 8.4
Identities = 16/141 (11%), Positives = 28/141 (19%), Gaps = 10/141 (7%)
Query: 167 HNNNPNISQYNNPNNYDPTTSQNNNISQYMPNNTSQNNNNTQYNPN------SSQNMPNN 220
N + + P D ++N S Y+ T N + M
Sbjct: 249 DENENAMQEIILPIRQDGVKTRNYGGSTYLVCGTRVAGMPRMGTTNGWSCIFARAAMVQK 308
Query: 221 ISQNANNTQNNPNNSHYNPNNIQNNPNNFSQNNISQNNTNNTQINKTTQYNPPPYPININ 280
N + P + + + + I Y
Sbjct: 309 FFSNLEDVPMLPADVEIPTKGLDTDE-QIDAFDAEHGIRTEDMIKAAGDDRALLYS---G 364
Query: 281 KENTPAWLTNSATDGDTTWFP 301
+ A G T
Sbjct: 365 VGGGRRKIQTDAISGFTDGLS 385
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP,
manganese, transferase; HET: ADP; 1.89A {Archaeoglobus
fulgidus} PDB: 1zp9_A* 1ztf_A*
Length = 258
Score = 28.9 bits (64), Expect = 8.4
Identities = 15/100 (15%), Positives = 37/100 (37%), Gaps = 3/100 (3%)
Query: 356 KSLKKLSHANLVKLKEVIRENDTLYFVFEYMKENLYQLIRDRDKFLPESIIRNMMYQVLQ 415
++L++ A + + + L F E + + + L E + + V++
Sbjct: 122 RNLERAKEAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVE 181
Query: 416 GLAFMH-RHGFFHRDMKPENLLCMGTELVKIADFGLAREI 454
+ ++ H D+ N++ + V D G A +
Sbjct: 182 NVKRLYQEAELVHADLSEYNIMY--IDKVYFIDMGQAVTL 219
>3fy3_A Hemolysin; beta helix, solenoid, two partner secretion, cell
membrane, cell outer membrane, cytolysis, hemolysis,
membra; 1.80A {Proteus mirabilis}
Length = 236
Score = 28.4 bits (63), Expect = 8.8
Identities = 9/49 (18%), Positives = 14/49 (28%), Gaps = 1/49 (2%)
Query: 232 PNNSHYNPNNIQNNPNNFSQNNISQNNTNNTQINKTTQYNPPPYPININ 280
P+ H P+ + NI N N+ +N N
Sbjct: 5 PDAGHQGPD-VSAVNGGTQVINIVTPNNEGISHNQYQDFNVGKPGAVFN 52
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.133 0.393
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 13,918,845
Number of extensions: 815229
Number of successful extensions: 2890
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2296
Number of HSP's successfully gapped: 681
Length of query: 962
Length of database: 6,701,793
Length adjustment: 103
Effective length of query: 859
Effective length of database: 3,825,930
Effective search space: 3286473870
Effective search space used: 3286473870
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (27.8 bits)