BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5016
(485 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|157130154|ref|XP_001661845.1| AMP dependent coa ligase [Aedes aegypti]
gi|108872001|gb|EAT36226.1| AAEL011676-PA [Aedes aegypti]
Length = 1017
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 167/586 (28%), Positives = 259/586 (44%), Gaps = 162/586 (27%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++AKVVD + VPFGT GEL +RG+ MLGYW DEQKTKETI D+WL+TG
Sbjct: 438 YEAKVVDQDGNTVPFGTSGELWVRGYGTMLGYWGDEQKTKETIDVDKWLKTG-------- 489
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
DQF LREDGYG++VGR+K+M+IRGGENIYPK
Sbjct: 490 -----------------------------DQFQLREDGYGKIVGRMKEMVIRGGENIYPK 520
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL--------------KENAKLNAYED 184
E+E+F+ THP +LE + GVPDERMGEE+ + + K K +
Sbjct: 521 ELEDFLCTHPKILETHCIGVPDERMGEEICAYVGINPAFQAPEAEYALNKAGVKALILAE 580
Query: 185 KSISSDYHEFET--------------------MYDSIMAHPNRTTPYYQWWSY------- 217
+ + +Y++ T ++++ N + SY
Sbjct: 581 QHFTQNYYDLTTQVVPELKNSLPGKLRSTRVPTLETVVVDTNNGSALPGTISYRDMLQLP 640
Query: 218 --------DPNQSYVTHDNGFPVDYNRALYSLKMSSLLPHNFSAEVEAHYNQKSDIDWEY 269
+P QS ++ D+G + + L ++L+ HN H +++ D +
Sbjct: 641 TEQNISAIEPLQSSISPDSGLNMQFTSGTTGLPKAALVTHNGFINNAIHLAHRNEFDVKQ 700
Query: 270 ADKCE-------------------------------KSMQGWAKTLSSEYNSYAGPVTLR 298
C K M+ + + + G T+
Sbjct: 701 HRICLQLPLFHAFAMVVGVLTAFTYGTTIVLPGARYKPMESIEAIIKEKCTAIYGTPTMY 760
Query: 299 RNLIDPLEIVQNRIDDVEYEF------QEKMFKDVKNYLITPALKGLYHFKKWMNPKFST 352
+L++ + ++ V+ ++F D+ L K +Y + F +
Sbjct: 761 VDLVNKVRETNQKLPPVDLAVTGGATCSPQLFSDILEVLNVRKAKTVYGLTEACGIVFQS 820
Query: 353 ----TTRKVALTWPNSMDSEARIYHYKKYLREEENITVP---------DSAGRSIF---- 395
+ ++ T + MD H++ + + + TVP S+G +
Sbjct: 821 LFDDSREEILETVGHIMD------HFEAKVVDGQGNTVPFGTPGELWVRSSGMMLGYWGD 874
Query: 396 -EKDQFVLREDG--------------YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
+K + L DG YG++VGRIK++IIRGGENI+P+EIE+++ THP V
Sbjct: 875 EKKTKETLDVDGWLRTGDQFVLREDGYGKIVGRIKEIIIRGGENIFPREIEDYLNTHPKV 934
Query: 441 LEAYAYGVPDERMGEEVGISIKLKEN-AKLNADDIRTFCKGKVSKF 485
LE + GVPD RMGEE+ ++LKE L D+I+ FCKGK++ F
Sbjct: 935 LETHCVGVPDSRMGEEICAFVRLKEEWQMLTFDEIKDFCKGKLAHF 980
>gi|189240709|ref|XP_001813711.1| PREDICTED: similar to CG12512 CG12512-PA [Tribolium castaneum]
gi|270013541|gb|EFA09989.1| hypothetical protein TcasGA2_TC012154 [Tribolium castaneum]
Length = 575
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 100/161 (62%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD + +VP GTPGEL IR +CNMLGYWEDE KTKE IGPD WL TG
Sbjct: 406 EVKIVDKDGVVVPCGTPGELCIRAYCNMLGYWEDEAKTKEMIGPDNWLMTG--------- 456
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
DQF+L EDGYG+VVGR+K+MIIRGGENI+PKE
Sbjct: 457 ----------------------------DQFILEEDGYGKVVGRLKEMIIRGGENIFPKE 488
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEEF+ +HPN+LE + G+P ER+GEEV I++K K+
Sbjct: 489 IEEFLNSHPNILETHVIGLPHERLGEEVCACIRVKPGTKVT 529
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 73/92 (79%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
+ DQF+L EDGYG+VVGR+K+MIIRGGENI+PKEIEEF+ +HPN+LE + G+P ER+
Sbjct: 453 LMTGDQFILEEDGYGKVVGRLKEMIIRGGENIFPKEIEEFLNSHPNILETHVIGLPHERL 512
Query: 454 GEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
GEEV I++K K+ DD+ +FCKGK++ F
Sbjct: 513 GEEVCACIRVKPGTKVTFDDMVSFCKGKMAHF 544
>gi|157130156|ref|XP_001661846.1| AMP dependent coa ligase [Aedes aegypti]
gi|108872002|gb|EAT36227.1| AAEL011677-PA [Aedes aegypti]
Length = 578
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 108/169 (63%), Gaps = 39/169 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++AKVVD N +VPFG PGEL +RG+ MLGYWEDEQKTKETIG D+WL+TG
Sbjct: 402 WEAKVVDQNGALVPFGMPGELCVRGYGTMLGYWEDEQKTKETIGMDKWLKTG-------- 453
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
DQFVLREDGYG++VGRIK+++IRGGENIYP+
Sbjct: 454 -----------------------------DQFVLREDGYGKIVGRIKEVVIRGGENIYPR 484
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSI 187
EIE+ + THP+VLE + GVPD+RMGEEV ++L N +N ++ +
Sbjct: 485 EIEDVLITHPDVLEVHCVGVPDDRMGEEVCAFVRL--NNGVNEFDRAQV 531
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVLREDGYG++VGRIK+++IRGGENIYP+EIE+ + THP+VLE + GVPD+RMGEEV
Sbjct: 454 DQFVLREDGYGKIVGRIKEVVIRGGENIYPREIEDVLITHPDVLEVHCVGVPDDRMGEEV 513
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
++L + + ++ FCKGK++ F
Sbjct: 514 CAFVRLNNGVNEFDRAQVKEFCKGKIAHF 542
>gi|157106378|ref|XP_001649296.1| AMP dependent coa ligase [Aedes aegypti]
gi|108868852|gb|EAT33077.1| AAEL014664-PA [Aedes aegypti]
Length = 586
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 110/186 (59%), Gaps = 46/186 (24%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++AKVVD + VPFGT GEL +RG+ MLGYW DEQKTKETI D+WL+TG
Sbjct: 407 YEAKVVDQDGNTVPFGTSGELWVRGYGTMLGYWGDEQKTKETIDVDKWLKTG-------- 458
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
DQF LREDGYG++VGR+K+M+IRGGENIYPK
Sbjct: 459 -----------------------------DQFQLREDGYGKIVGRMKEMVIRGGENIYPK 489
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDYHEFETMY 198
E+E+F+ THP +LE + GVPDERMGEE+ ++L +D S+S D+ E +
Sbjct: 490 ELEDFLCTHPKILETHCIGVPDERMGEEICAYVRL---------QDSSMSLDHAEMKAFC 540
Query: 199 DSIMAH 204
+AH
Sbjct: 541 KGKIAH 546
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 74/89 (83%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQF LREDGYG++VGR+K+M+IRGGENIYPKE+E+F+ THP +LE + GVPDERMGEE+
Sbjct: 459 DQFQLREDGYGKIVGRMKEMVIRGGENIYPKELEDFLCTHPKILETHCIGVPDERMGEEI 518
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
++L++++ L+ +++ FCKGK++ F
Sbjct: 519 CAYVRLQDSSMSLDHAEMKAFCKGKIAHF 547
>gi|157106382|ref|XP_001649298.1| AMP dependent coa ligase [Aedes aegypti]
gi|108868854|gb|EAT33079.1| AAEL014665-PA [Aedes aegypti]
Length = 546
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 81/155 (52%), Positives = 101/155 (65%), Gaps = 37/155 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++AKVVD N +VPFG PGEL +RG+ MLGYWEDEQKTKETI D+WL+TG
Sbjct: 370 WEAKVVDQNGDLVPFGMPGELCVRGYGTMLGYWEDEQKTKETIAIDKWLKTG-------- 421
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
DQFVLREDGYG++VGRIK+++IRGGENIYP+
Sbjct: 422 -----------------------------DQFVLREDGYGKIVGRIKEVVIRGGENIYPR 452
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
EIE+ + THP+VLE + GVPD+RMGEEV ++L
Sbjct: 453 EIEDVLITHPDVLEVHCVGVPDDRMGEEVCAFVRL 487
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVLREDGYG++VGRIK+++IRGGENIYP+EIE+ + THP+VLE + GVPD+RMGEEV
Sbjct: 422 DQFVLREDGYGKIVGRIKEVVIRGGENIYPREIEDVLITHPDVLEVHCVGVPDDRMGEEV 481
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
++L + + ++ FCKGK++ F
Sbjct: 482 CAFVRLNNGVNEFDRVQVKEFCKGKIAHF 510
>gi|157106384|ref|XP_001649299.1| AMP dependent coa ligase [Aedes aegypti]
gi|108868855|gb|EAT33080.1| AAEL014662-PA [Aedes aegypti]
Length = 597
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 103/165 (62%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
F+AKVVD+ VPFGTPGEL +RG+ MLGYWE+EQKTKE IG D WL+TG
Sbjct: 421 FEAKVVDNEGNAVPFGTPGELCLRGYGTMLGYWEEEQKTKEIIGADHWLKTG-------- 472
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
DQFVL ++GYG VVGRIK++IIRGGEN+YPK
Sbjct: 473 -----------------------------DQFVLSQNGYGTVVGRIKEVIIRGGENVYPK 503
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
EIE+ + THP++LEAY GVPDER+ EE+ +++KE A A +
Sbjct: 504 EIEDILNTHPHLLEAYCIGVPDERLVEEICAFVRVKETAPKGAID 548
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 73/91 (80%), Gaps = 3/91 (3%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVL ++GYG VVGRIK++IIRGGEN+YPKEIE+ + THP++LEAY GVPDER+ EE+
Sbjct: 473 DQFVLSQNGYGTVVGRIKEVIIRGGENVYPKEIEDILNTHPHLLEAYCIGVPDERLVEEI 532
Query: 458 GISIKLKENA---KLNADDIRTFCKGKVSKF 485
+++KE A ++ D+I+ FC+GK++ F
Sbjct: 533 CAFVRVKETAPKGAIDLDEIKQFCQGKLANF 563
>gi|403183212|gb|EJY57933.1| AAEL017299-PA [Aedes aegypti]
Length = 894
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 108/179 (60%), Gaps = 39/179 (21%)
Query: 7 TDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPD 64
T++ ST+ F+AKV+D VPFGTPGEL +RG+ MLGYWE+EQKTKE IG D
Sbjct: 703 TEVALSTVGKLMEHFEAKVIDLEGNTVPFGTPGELCLRGYGTMLGYWEEEQKTKEIIGAD 762
Query: 65 RWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRI 124
WL+TG DQFVL ++GYG VVGRI
Sbjct: 763 HWLKTG-------------------------------------DQFVLSQNGYGTVVGRI 785
Query: 125 KDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
K++IIRGGEN+YPKEIE+ + THP++LEAY GVPDER+ EE+ +++KE A A +
Sbjct: 786 KEVIIRGGENVYPKEIEDILNTHPHLLEAYCIGVPDERLVEEICAFVRVKETAPKGAID 844
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 73/91 (80%), Gaps = 3/91 (3%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVL ++GYG VVGRIK++IIRGGEN+YPKEIE+ + THP++LEAY GVPDER+ EE+
Sbjct: 769 DQFVLSQNGYGTVVGRIKEVIIRGGENVYPKEIEDILNTHPHLLEAYCIGVPDERLVEEI 828
Query: 458 GISIKLKENA---KLNADDIRTFCKGKVSKF 485
+++KE A ++ D+I+ FC+GK++ F
Sbjct: 829 CAFVRVKETAPKGAIDLDEIKQFCQGKLANF 859
>gi|170028425|ref|XP_001842096.1| acetyl-coenzyme A synthetase [Culex quinquefasciatus]
gi|167874251|gb|EDS37634.1| acetyl-coenzyme A synthetase [Culex quinquefasciatus]
Length = 853
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 109/189 (57%), Gaps = 40/189 (21%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++AKVVD VPFGTPGEL +RG+ MLGYW D +KTKETI D+WLRTG
Sbjct: 163 YEAKVVDSAGNTVPFGTPGELWVRGYGTMLGYWNDPKKTKETIDVDKWLRTG-------- 214
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
DQFVLR DGYG++VGRIK++IIRGGENI+PK
Sbjct: 215 -----------------------------DQFVLRADGYGKIVGRIKEVIIRGGENIFPK 245
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNAYEDKSISSDYHEFETM 197
EIE+F+ HP +LE + VPDERMGEEV ++LK+ +L+ E + YH E
Sbjct: 246 EIEDFLNAHPKILETHCIAVPDERMGEEVCAYVRLKDGKEQLDLSEIRDYCLSYHRCEGK 305
Query: 198 YDSIMAHPN 206
Y M H N
Sbjct: 306 YP--MVHRN 312
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 103/160 (64%), Gaps = 37/160 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++AKVVD +VP+GTPGEL +RG+ NMLGYW DE KTK+T D WL+TG
Sbjct: 679 WEAKVVDSEGNMVPYGTPGELWMRGYGNMLGYWGDEAKTKDTFAEDNWLKTG-------- 730
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
DQFVLREDGYG++VGRIK+M+IRGGENIYPK
Sbjct: 731 -----------------------------DQFVLREDGYGKIVGRIKEMVIRGGENIYPK 761
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
EIE+F+ +HP +LE + GVPDERMGEE+ ++L+++++
Sbjct: 762 EIEDFLNSHPKILETHCVGVPDERMGEEICAFVRLRDSSQ 801
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 76/89 (85%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVLREDGYG++VGRIK+M+IRGGENIYPKEIE+F+ +HP +LE + GVPDERMGEE+
Sbjct: 731 DQFVLREDGYGKIVGRIKEMVIRGGENIYPKEIEDFLNSHPKILETHCVGVPDERMGEEI 790
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSKF 485
++L+++++ ++ +++ FC+GK++ F
Sbjct: 791 CAFVRLRDSSQTMDRAELKDFCQGKIAHF 819
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 1/82 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVLR DGYG++VGRIK++IIRGGENI+PKEIE+F+ HP +LE + VPDERMGEEV
Sbjct: 215 DQFVLRADGYGKIVGRIKEVIIRGGENIFPKEIEDFLNAHPKILETHCIAVPDERMGEEV 274
Query: 458 GISIKLKENA-KLNADDIRTFC 478
++LK+ +L+ +IR +C
Sbjct: 275 CAYVRLKDGKEQLDLSEIRDYC 296
>gi|170028419|ref|XP_001842093.1| 2-succinylbenzoate-CoA ligase [Culex quinquefasciatus]
gi|167874248|gb|EDS37631.1| 2-succinylbenzoate-CoA ligase [Culex quinquefasciatus]
Length = 574
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 106/174 (60%), Gaps = 37/174 (21%)
Query: 3 DMNPTDLQFSTLSSSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
D T L+ + ++AKVVD IVPFGTPGEL +RG N+LGYW DE KTKE +G
Sbjct: 380 DSTQTALESVGRIADHYEAKVVDREGGIVPFGTPGELWVRGFGNLLGYWGDEDKTKEIMG 439
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
PD WL+TG DQFVLR DGYG++VG
Sbjct: 440 PDGWLKTG-------------------------------------DQFVLRPDGYGRIVG 462
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
RIK++IIRGGENIYP+EIE+ + THP +LE++ GVP+ER+GEEV I+LK++
Sbjct: 463 RIKELIIRGGENIYPREIEDVLNTHPAILESHCIGVPNERLGEEVCAYIRLKDS 516
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 74/89 (83%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVLR DGYG++VGRIK++IIRGGENIYP+EIE+ + THP +LE++ GVP+ER+GEEV
Sbjct: 448 DQFVLRPDGYGRIVGRIKELIIRGGENIYPREIEDVLNTHPAILESHCIGVPNERLGEEV 507
Query: 458 GISIKLKE-NAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++ ++IR+FCK K++ F
Sbjct: 508 CAYIRLKDSDGMIDMEEIRSFCKFKLAYF 536
>gi|158293300|ref|XP_314666.4| AGAP008557-PA [Anopheles gambiae str. PEST]
gi|157016639|gb|EAA10067.4| AGAP008557-PA [Anopheles gambiae str. PEST]
Length = 594
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 111/176 (63%), Gaps = 38/176 (21%)
Query: 1 MWDMNPTDLQFST-LSSSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKE 59
+++ +P D+Q + + ++AKV+D + IVPFGT GEL +RG+ MLGYW DE+KTKE
Sbjct: 402 LFEESPEDVQQTVGHVTDHYEAKVIDRDGHIVPFGTAGELCVRGYGTMLGYWGDEKKTKE 461
Query: 60 TIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQ 119
TI DRWLRTG DQF+LREDGYG+
Sbjct: 462 TIAADRWLRTG-------------------------------------DQFMLREDGYGK 484
Query: 120 VVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 175
+VGR+K+++IRGGENIYPKE+E+++ T+P +LE + GVPDER GEE+ ++LK+
Sbjct: 485 IVGRLKEVVIRGGENIYPKEVEDYLNTYPKILEVHCIGVPDERTGEELCAYVRLKD 540
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
Query: 389 SAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGV 448
+A R + DQF+LREDGYG++VGR+K+++IRGGENIYPKE+E+++ T+P +LE + GV
Sbjct: 464 AADRWLRTGDQFMLREDGYGKIVGRLKEVVIRGGENIYPKEVEDYLNTYPKILEVHCIGV 523
Query: 449 PDERMGEEVGISIKLKE-NAKLNADDIRTFCKGKVS 483
PDER GEE+ ++LK+ ++ ++I +C+GK++
Sbjct: 524 PDERTGEELCAYVRLKDPEETIDREEIMRYCEGKLA 559
>gi|24581924|ref|NP_608924.1| CG12512 [Drosophila melanogaster]
gi|7296974|gb|AAF52246.1| CG12512 [Drosophila melanogaster]
gi|223976007|gb|ACN32191.1| MIP06029p [Drosophila melanogaster]
Length = 593
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 105/171 (61%), Gaps = 37/171 (21%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AKVVD R VPFG PGEL +RG+ MLGY +DE+KTKETIG DRWLRTG
Sbjct: 410 IEAKVVDAEGRCVPFGQPGELCVRGYTTMLGYHDDEEKTKETIGNDRWLRTG-------- 461
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
DQFVL +GYG++VGR+K+M+IRGGENI+PK
Sbjct: 462 -----------------------------DQFVLEANGYGRIVGRLKEMLIRGGENIFPK 492
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIE+F+ HP V+EA+ GVPDER+GEEV ++L+E ++ +++ +
Sbjct: 493 EIEDFLNAHPQVIEAHVIGVPDERLGEEVCAYVRLEEGVDPASFTAETLKA 543
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 153/355 (43%), Gaps = 43/355 (12%)
Query: 173 LKENAKLNAYEDKSISSDYHEFETMYDSIMAHPNRTTPYYQWWSYDPNQSYVTH----DN 228
LK + + + D + S+ E M SI+ + + +P + +TH +N
Sbjct: 199 LKGALRFDDFLDLASKSEREEVAKMQKSILPESACNIQFTSGTTGNPKAACLTHHNFVNN 258
Query: 229 GFPVDYNRALYSLKMSSLLP--HNFSA--EVEAHYNQKSDIDWEYA-----DKCEKSMQG 279
G V L ++ +P H F + A + + + A D + +
Sbjct: 259 GIHVGNRNELEGERICVQVPMFHAFGVIISIMAALTKGATMVLPAAGFSPKDSLQAIVNE 318
Query: 280 WAKTLSSEYNSYAGPVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITPALKGL 339
+ Y V ++ L PL ++ + ++ KDV+ L A+ +
Sbjct: 319 KCSVIHGTPTMYVDLVNTQKKLQVPLGRIKKAVTGGAI-VSPQLIKDVRQVLNVEAVHSV 377
Query: 340 YHFKKWMNPKFSTTTRKVALTWPNSM------------DSEARIYHYKK----------- 376
Y + F + + NS+ D+E R + +
Sbjct: 378 YGLTETTAVIFQSLPGDSSDVVLNSVGHLTDHIEAKVVDAEGRCVPFGQPGELCVRGYTT 437
Query: 377 ---YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEF 433
Y +EE R + DQFVL +GYG++VGR+K+M+IRGGENI+PKEIE+F
Sbjct: 438 MLGYHDDEEKTKETIGNDRWLRTGDQFVLEANGYGRIVGRLKEMLIRGGENIFPKEIEDF 497
Query: 434 IQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN---AKLNADDIRTFCKGKVSKF 485
+ HP V+EA+ GVPDER+GEEV ++L+E A A+ ++ + KGK++ F
Sbjct: 498 LNAHPQVIEAHVIGVPDERLGEEVCAYVRLEEGVDPASFTAETLKAYAKGKLAHF 552
>gi|157106380|ref|XP_001649297.1| AMP dependent coa ligase [Aedes aegypti]
gi|108868853|gb|EAT33078.1| AAEL014663-PA [Aedes aegypti]
Length = 382
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 102/166 (61%), Gaps = 37/166 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
F+AK+VD VPFGTPGEL +R MLGYW DE+KTKET+ D WLRTG
Sbjct: 205 FEAKIVDGQGNTVPFGTPGELWVRSSGMMLGYWGDEKKTKETLDADGWLRTG-------- 256
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
DQFVLREDGYG++VGRIK++IIRGGENI+P+
Sbjct: 257 -----------------------------DQFVLREDGYGKIVGRIKEIIIRGGENIFPR 287
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
EIE+++ THP VLE + GVPD RMGEE+ ++LKE ++ +++
Sbjct: 288 EIEDYLNTHPKVLETHCVGVPDSRMGEEICAFVRLKEEGQMLTFDE 333
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVLREDGYG++VGRIK++IIRGGENI+P+EIE+++ THP VLE + GVPD RMGEE+
Sbjct: 257 DQFVLREDGYGKIVGRIKEIIIRGGENIFPREIEDYLNTHPKVLETHCVGVPDSRMGEEI 316
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSKF 485
++LKE + L D+I+ FCKG ++ F
Sbjct: 317 CAFVRLKEEGQMLTFDEIKDFCKGNLAHF 345
>gi|194856653|ref|XP_001968796.1| GG24306 [Drosophila erecta]
gi|190660663|gb|EDV57855.1| GG24306 [Drosophila erecta]
Length = 593
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 104/177 (58%), Gaps = 45/177 (25%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+AKVVD R VPFG PGEL +RG+ MLGY DE+KTKETIG DRWLRTG
Sbjct: 411 EAKVVDAEGRCVPFGQPGELCVRGYTTMLGYHGDEEKTKETIGTDRWLRTG--------- 461
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
DQFVL +GYG++VGR+K+M+IRGGENI+PKE
Sbjct: 462 ----------------------------DQFVLEANGYGRIVGRLKEMLIRGGENIFPKE 493
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN--------AKLNAYEDKSIS 188
IE+F+ THP V+E + GVPDER+GEEV ++L+E A L AY ++
Sbjct: 494 IEDFVNTHPQVIETHVIGVPDERLGEEVCAYVRLEEGVDPATFTAATLKAYAKGKLA 550
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 69/91 (75%), Gaps = 3/91 (3%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVL +GYG++VGR+K+M+IRGGENI+PKEIE+F+ THP V+E + GVPDER+GEEV
Sbjct: 462 DQFVLEANGYGRIVGRLKEMLIRGGENIFPKEIEDFVNTHPQVIETHVIGVPDERLGEEV 521
Query: 458 GISIKLKEN---AKLNADDIRTFCKGKVSKF 485
++L+E A A ++ + KGK++ F
Sbjct: 522 CAYVRLEEGVDPATFTAATLKAYAKGKLAHF 552
>gi|195576736|ref|XP_002078230.1| GD22652 [Drosophila simulans]
gi|194190239|gb|EDX03815.1| GD22652 [Drosophila simulans]
Length = 593
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 104/171 (60%), Gaps = 37/171 (21%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AKVVD R VPFG PGEL +RG+ MLGY DE+KTKETIG DRWLRTG
Sbjct: 410 IEAKVVDAEGRCVPFGQPGELCVRGYTTMLGYHGDEEKTKETIGNDRWLRTG-------- 461
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
DQFVL +GYG++VGR+K+M+IRGGENI+PK
Sbjct: 462 -----------------------------DQFVLEANGYGRIVGRLKEMLIRGGENIFPK 492
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIE+F+ HP V+EA+ GVPDER+GEEV ++L+E ++ +++ +
Sbjct: 493 EIEDFLNAHPQVIEAHVIGVPDERLGEEVCAYVRLEEGVDPASFTAETLKA 543
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 153/355 (43%), Gaps = 43/355 (12%)
Query: 173 LKENAKLNAYEDKSISSDYHEFETMYDSIMAHPNRTTPYYQWWSYDPNQSYVTH----DN 228
LK + + + D + S+ E + SI+ + + +P + +TH +N
Sbjct: 199 LKGALRFDDFLDLAGKSEREEVTKIQKSILPESACNIQFTSGTTGNPKAACLTHHNFVNN 258
Query: 229 GFPVDYNRALYSLKMSSLLP--HNFSA--EVEAHYNQKSDIDWEYA-----DKCEKSMQG 279
G V L ++ +P H F + A + + + A D + +
Sbjct: 259 GIHVGNRNELQGERICVQVPMFHAFGVIITIMAALTKGATMVLPAAGFSPKDSLQAIVNE 318
Query: 280 WAKTLSSEYNSYAGPVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITPALKGL 339
+ Y V ++ L PL ++ + ++ KDV+ L A+ +
Sbjct: 319 KCSVIHGTPTMYVDLVNTQKKLQVPLGRIKKAVTGGAI-VSPQLIKDVRQVLNVEAVHSV 377
Query: 340 YHFKKWMNPKFSTTTRKVALTWPNSM------------DSEARIYHYKK----------- 376
Y + F + + NS+ D+E R + +
Sbjct: 378 YGLTETTAVIFQSLPGDSSDVVLNSVGHLTDHIEAKVVDAEGRCVPFGQPGELCVRGYTT 437
Query: 377 ---YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEF 433
Y +EE R + DQFVL +GYG++VGR+K+M+IRGGENI+PKEIE+F
Sbjct: 438 MLGYHGDEEKTKETIGNDRWLRTGDQFVLEANGYGRIVGRLKEMLIRGGENIFPKEIEDF 497
Query: 434 IQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN---AKLNADDIRTFCKGKVSKF 485
+ HP V+EA+ GVPDER+GEEV ++L+E A A+ ++ + KGK++ F
Sbjct: 498 LNAHPQVIEAHVIGVPDERLGEEVCAYVRLEEGVDPASFTAETLKAYAKGKLAHF 552
>gi|195473885|ref|XP_002089222.1| GE19001 [Drosophila yakuba]
gi|194175323|gb|EDW88934.1| GE19001 [Drosophila yakuba]
Length = 593
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 103/171 (60%), Gaps = 37/171 (21%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AKVVD R VPFG PGEL +RG+ MLGY DE KTKETIG DRWLRTG
Sbjct: 410 IEAKVVDEEGRCVPFGQPGELCVRGYTTMLGYHGDEAKTKETIGNDRWLRTG-------- 461
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
DQFVL +GYG++VGR+K+M+IRGGENI+PK
Sbjct: 462 -----------------------------DQFVLEANGYGRIVGRLKEMLIRGGENIFPK 492
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIE+F+ +HP ++EA+ GVPDER+GEEV ++L+E ++ ++ +
Sbjct: 493 EIEDFLNSHPQIIEAHVIGVPDERLGEEVCAYVRLEEGVDPASFTAATVKA 543
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 70/91 (76%), Gaps = 3/91 (3%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVL +GYG++VGR+K+M+IRGGENI+PKEIE+F+ +HP ++EA+ GVPDER+GEEV
Sbjct: 462 DQFVLEANGYGRIVGRLKEMLIRGGENIFPKEIEDFLNSHPQIIEAHVIGVPDERLGEEV 521
Query: 458 GISIKLKEN---AKLNADDIRTFCKGKVSKF 485
++L+E A A ++ + KGK++ F
Sbjct: 522 CAYVRLEEGVDPASFTAATVKAYAKGKLAHF 552
>gi|170028427|ref|XP_001842097.1| AMP dependent coa ligase [Culex quinquefasciatus]
gi|167874252|gb|EDS37635.1| AMP dependent coa ligase [Culex quinquefasciatus]
Length = 582
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 98/160 (61%), Gaps = 37/160 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++AKVVD N VP G PGEL +RG+ MLGYW D QKTKETI D+WL+TG
Sbjct: 409 YEAKVVDANGNTVPMGAPGELWVRGYGTMLGYWGDPQKTKETIDVDKWLKTG-------- 460
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
DQF LR DGYG++VGR+K+M+IRGGENIYPK
Sbjct: 461 -----------------------------DQFELRPDGYGKIVGRMKEMVIRGGENIYPK 491
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
E+E+F+ THP +LE + GVPDERMGEE+ ++LK+ +
Sbjct: 492 ELEDFLNTHPKILETHCIGVPDERMGEELCAYVRLKDEGQ 531
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQF LR DGYG++VGR+K+M+IRGGENIYPKE+E+F+ THP +LE + GVPDERMGEE+
Sbjct: 461 DQFELRPDGYGKIVGRMKEMVIRGGENIYPKELEDFLNTHPKILETHCIGVPDERMGEEL 520
Query: 458 GISIKLK-ENAKLNADDIRTFCKGKVSKF 485
++LK E L +++ FCKGK+S F
Sbjct: 521 CAYVRLKDEGQSLEHAEMKQFCKGKISHF 549
>gi|328718820|ref|XP_003246586.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
isoform 2 [Acyrthosiphon pisum]
Length = 596
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 103/169 (60%), Gaps = 37/169 (21%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+AKV+D N +VPFGTPGELLIRG+ NM GY+ DE+KTKETI + WL TG
Sbjct: 420 EAKVIDTNGDMVPFGTPGELLIRGYLNMNGYFNDEEKTKETIDSNGWLHTG--------- 470
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
DQFVL EDGYG VGR+K+MIIRGGEN++PKE
Sbjct: 471 ----------------------------DQFVLYEDGYGNHVGRLKEMIIRGGENLFPKE 502
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
IE F+++HP++ + YG+PD RMGEEV S+ +KE A + + K+ S
Sbjct: 503 IEYFLESHPSISQVQVYGIPDHRMGEEVCASVIVKEGATITEADIKAYS 551
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 68/88 (77%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVL EDGYG VGR+K+MIIRGGEN++PKEIE F+++HP++ + YG+PD RMGEEV
Sbjct: 471 DQFVLYEDGYGNHVGRLKEMIIRGGENLFPKEIEYFLESHPSISQVQVYGIPDHRMGEEV 530
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
S+ +KE A + DI+ + KGK+S F
Sbjct: 531 CASVIVKEGATITEADIKAYSKGKISHF 558
>gi|328718818|ref|XP_001945610.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
isoform 1 [Acyrthosiphon pisum]
Length = 596
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 103/169 (60%), Gaps = 37/169 (21%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+AKV+D N +VPFGTPGELLIRG+ NM GY+ DE+KTKETI + WL TG
Sbjct: 420 EAKVIDTNGDMVPFGTPGELLIRGYLNMNGYFNDEEKTKETIDSNGWLHTG--------- 470
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
DQFVL EDGYG VGR+K+MIIRGGEN++PKE
Sbjct: 471 ----------------------------DQFVLYEDGYGNHVGRLKEMIIRGGENLFPKE 502
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
IE F+++HP++ + YG+PD RMGEEV S+ +KE A + + K+ S
Sbjct: 503 IEYFLESHPSISQVQVYGIPDHRMGEEVCASVIVKEGATITEADIKAYS 551
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 68/88 (77%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVL EDGYG VGR+K+MIIRGGEN++PKEIE F+++HP++ + YG+PD RMGEEV
Sbjct: 471 DQFVLYEDGYGNHVGRLKEMIIRGGENLFPKEIEYFLESHPSISQVQVYGIPDHRMGEEV 530
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
S+ +KE A + DI+ + KGK++ F
Sbjct: 531 CASVIVKEGATITEADIKAYSKGKIAHF 558
>gi|170028423|ref|XP_001842095.1| short-chain-fatty-acid-CoA ligase [Culex quinquefasciatus]
gi|167874250|gb|EDS37633.1| short-chain-fatty-acid-CoA ligase [Culex quinquefasciatus]
Length = 784
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 92/148 (62%), Gaps = 37/148 (25%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+AKVVD N R VPFGTPGEL RG MLG+W DE KTKE +G D WL+TG
Sbjct: 400 EAKVVDQNGRTVPFGTPGELWFRGFGTMLGFWGDEAKTKEVLGRDGWLKTG--------- 450
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
DQF+L+++GYG++VGRIKD+IIRGG+N+YPKE
Sbjct: 451 ----------------------------DQFILQKNGYGKIVGRIKDIIIRGGDNVYPKE 482
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEV 167
+E+ + THP +LE+Y GVPDER+GE V
Sbjct: 483 VEDVLDTHPGILESYCIGVPDERLGERV 510
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 54/60 (90%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQF+L+++GYG++VGRIKD+IIRGG+N+YPKE+E+ + THP +LE+Y GVPDER+GE V
Sbjct: 451 DQFILQKNGYGKIVGRIKDIIIRGGDNVYPKEVEDVLDTHPGILESYCIGVPDERLGERV 510
>gi|194760629|ref|XP_001962541.1| GF15513 [Drosophila ananassae]
gi|190616238|gb|EDV31762.1| GF15513 [Drosophila ananassae]
Length = 595
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 102/171 (59%), Gaps = 37/171 (21%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AKVVD + VP+G PGEL +RG+ MLGY DE+KT ETIG D+WLRTG
Sbjct: 411 IEAKVVDAEGKCVPYGQPGELCVRGYVTMLGYHGDEEKTTETIGKDKWLRTG-------- 462
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
DQF+L +GYG++VGR+K+MIIRGGENI+PK
Sbjct: 463 -----------------------------DQFILEANGYGRIVGRLKEMIIRGGENIFPK 493
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIE+F+ HP ++EA+ GVPDER+GEEV ++L E ++ +++ +
Sbjct: 494 EIEDFLNAHPQIIEAHVIGVPDERLGEEVCAFVRLNEGVDPASFTAEALKA 544
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 3/91 (3%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQF+L +GYG++VGR+K+MIIRGGENI+PKEIE+F+ HP ++EA+ GVPDER+GEEV
Sbjct: 463 DQFILEANGYGRIVGRLKEMIIRGGENIFPKEIEDFLNAHPQIIEAHVIGVPDERLGEEV 522
Query: 458 GISIKLKEN---AKLNADDIRTFCKGKVSKF 485
++L E A A+ ++ + KGK++ F
Sbjct: 523 CAFVRLNEGVDPASFTAEALKAYSKGKLAHF 553
>gi|328718816|ref|XP_001945665.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Acyrthosiphon pisum]
Length = 595
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 103/169 (60%), Gaps = 37/169 (21%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+AKVVD N +VPFGTPGELLIRG+ M GY+ DE+KTKETI + WL TG
Sbjct: 419 EAKVVDTNGNMVPFGTPGELLIRGYLVMNGYFNDEEKTKETIDSNGWLHTG--------- 469
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
DQFVL EDGYG VGR+K+MIIRGGEN++PKE
Sbjct: 470 ----------------------------DQFVLYEDGYGNHVGRLKEMIIRGGENLFPKE 501
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
IE F+++HP++ + YG+PD+RMGEEV S+ +KE A + + K+ S
Sbjct: 502 IEYFLESHPSISQVQVYGIPDDRMGEEVCASVIVKEGAAVTEADIKAYS 550
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 69/88 (78%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVL EDGYG VGR+K+MIIRGGEN++PKEIE F+++HP++ + YG+PD+RMGEEV
Sbjct: 470 DQFVLYEDGYGNHVGRLKEMIIRGGENLFPKEIEYFLESHPSISQVQVYGIPDDRMGEEV 529
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
S+ +KE A + DI+ + KGK+S F
Sbjct: 530 CASVIVKEGAAVTEADIKAYSKGKISHF 557
>gi|198476768|ref|XP_002132442.1| GA25183 [Drosophila pseudoobscura pseudoobscura]
gi|198137844|gb|EDY69844.1| GA25183 [Drosophila pseudoobscura pseudoobscura]
Length = 594
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 98/157 (62%), Gaps = 37/157 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+AKV+D + + VP G PGEL +RG+ MLGY D +KT+ETIG D+WLRTG
Sbjct: 411 EAKVIDSDGKCVPLGQPGELCVRGYVTMLGYHGDPEKTEETIGKDKWLRTG--------- 461
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
DQFVL +GYG++VGR+K+MIIRGGENI+PKE
Sbjct: 462 ----------------------------DQFVLEANGYGRIVGRLKEMIIRGGENIFPKE 493
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
IE+F+ THP V+EA+ GVPDER+GEE+ ++L E+
Sbjct: 494 IEDFLNTHPQVIEAHVIGVPDERLGEELCAFVRLNED 530
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 159/365 (43%), Gaps = 63/365 (17%)
Query: 173 LKENAKLNAYEDKSISSDYHEFETMYDSIMAHPNRTTPYYQWWSYDPNQSYVTH----DN 228
LK + + D + SS+ E + I + + P + ++H +N
Sbjct: 199 LKGALRFDDCLDLASSSEREEIGKLQTKICPESACNIQFTSGTTGSPKAAALSHYNFVNN 258
Query: 229 GFPVDYNRALYSLKMSSLLP--HNFSA--EVEAHYNQKSDIDWEYADKCEK-SMQGWAK- 282
G V L ++ +P H F + A ++ + + A K S+Q K
Sbjct: 259 GIHVGTRNQLEGERICVQVPLFHAFGVVITIMAGLSKGATLVLPAAGFSPKDSLQAIVKE 318
Query: 283 ---TLSSEYNSYAGPVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITPALKGL 339
+ Y V+ +R L PL ++ I ++ KDVK L A+ +
Sbjct: 319 KCTVIHGTPTMYVDLVSTQRKLQVPLGRIKKAITGGAI-VSPQLIKDVKEVLGVEAMHSV 377
Query: 340 YHFKKWMNPKFSTTTRKVALTWPNSMDSEARIYHYKKYLREEENITVPDSAGRSI----- 394
+ + TT + + PN DSE ++ H +L++ V DS G+ +
Sbjct: 378 F--------GLTETTAVIFQSVPN--DSEDKVLHTVGHLQDHVEAKVIDSDGKCVPLGQP 427
Query: 395 -------------------------------FEKDQFVLREDGYGQVVGRIKDMIIRGGE 423
DQFVL +GYG++VGR+K+MIIRGGE
Sbjct: 428 GELCVRGYVTMLGYHGDPEKTEETIGKDKWLRTGDQFVLEANGYGRIVGRLKEMIIRGGE 487
Query: 424 NIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN---AKLNADDIRTFCKG 480
NI+PKEIE+F+ THP V+EA+ GVPDER+GEE+ ++L E+ A + +R +CKG
Sbjct: 488 NIFPKEIEDFLNTHPQVIEAHVIGVPDERLGEELCAFVRLNEDIDPATFTVEALRAYCKG 547
Query: 481 KVSKF 485
K++ F
Sbjct: 548 KLAHF 552
>gi|195118066|ref|XP_002003561.1| GI21922 [Drosophila mojavensis]
gi|193914136|gb|EDW13003.1| GI21922 [Drosophila mojavensis]
Length = 598
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 102/170 (60%), Gaps = 37/170 (21%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+AKV+D +VP G PGEL +RG+ MLGY DE KTKE +G D+WL TG
Sbjct: 412 EAKVIDEQGCLVPLGQPGELCVRGYLTMLGYHGDEAKTKEILGADKWLHTG--------- 462
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
DQFVL +DGYG++VGR+KDM+IRGGENI+PKE
Sbjct: 463 ----------------------------DQFVLEKDGYGRIVGRLKDMVIRGGENIFPKE 494
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
+E+F+ THP V+EA+ GVPDER+GEE+ ++L+ + ++ + ++ +
Sbjct: 495 VEDFLNTHPQVVEAHVIGVPDERLGEELCAFVRLESDVDPKSFTNATVRA 544
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 3/91 (3%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVL +DGYG++VGR+KDM+IRGGENI+PKE+E+F+ THP V+EA+ GVPDER+GEE+
Sbjct: 463 DQFVLEKDGYGRIVGRLKDMVIRGGENIFPKEVEDFLNTHPQVVEAHVIGVPDERLGEEL 522
Query: 458 GISIKLKENA---KLNADDIRTFCKGKVSKF 485
++L+ + +R + KGK++ F
Sbjct: 523 CAFVRLESDVDPKSFTNATVRAYAKGKLAHF 553
>gi|170028421|ref|XP_001842094.1| AMP dependent coa ligase [Culex quinquefasciatus]
gi|167874249|gb|EDS37632.1| AMP dependent coa ligase [Culex quinquefasciatus]
Length = 609
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 97/159 (61%), Gaps = 37/159 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+AKVVD IVPFGTPGEL IRG+ MLG+W DE+KTKE + DRW RTG
Sbjct: 432 EAKVVDREGNIVPFGTPGELWIRGYGTMLGFWGDERKTKEVLSNDRWFRTG--------- 482
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
DQFVL+ DGYGQ+VGR+K+MIIRGGENIYPKE
Sbjct: 483 ----------------------------DQFVLQPDGYGQIVGRLKEMIIRGGENIYPKE 514
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+E+ + T P VLE + GVPD+R+GEEV +++ ++ +
Sbjct: 515 LEDVLNTIPEVLETHCIGVPDDRLGEEVCAYVRVVDSVE 553
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 68/91 (74%), Gaps = 3/91 (3%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVL+ DGYGQ+VGR+K+MIIRGGENIYPKE+E+ + T P VLE + GVPD+R+GEEV
Sbjct: 483 DQFVLQPDGYGQIVGRLKEMIIRGGENIYPKELEDVLNTIPEVLETHCIGVPDDRLGEEV 542
Query: 458 GISIKL---KENAKLNADDIRTFCKGKVSKF 485
+++ E + + D ++ FCK K++ +
Sbjct: 543 CAYVRVVDSVEGQQFDMDRLKRFCKDKLAHY 573
>gi|195155513|ref|XP_002018648.1| GL25909 [Drosophila persimilis]
gi|194114801|gb|EDW36844.1| GL25909 [Drosophila persimilis]
Length = 594
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 98/157 (62%), Gaps = 37/157 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+AKV+D + + VP G PGEL +RG+ MLGY D +KT+ETIG D+WLRTG
Sbjct: 411 EAKVIDSDGKCVPLGQPGELCVRGYVTMLGYHGDPEKTEETIGKDKWLRTG--------- 461
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
DQFVL +GYG++VGR+K++IIRGGENI+PKE
Sbjct: 462 ----------------------------DQFVLEANGYGRIVGRLKELIIRGGENIFPKE 493
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
IE+F+ THP V+EA+ GVPDER+GEE+ ++L E+
Sbjct: 494 IEDFLNTHPQVIEAHVIGVPDERLGEELCAFVRLNED 530
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 159/365 (43%), Gaps = 63/365 (17%)
Query: 173 LKENAKLNAYEDKSISSDYHEFETMYDSIMAHPNRTTPYYQWWSYDPNQSYVTH----DN 228
LK + + D + SS+ E + I + + P + ++H +N
Sbjct: 199 LKGALRFDDCLDLASSSEREEIGKLQTKICPESACNIQFTSGTTGSPKAAALSHYNFVNN 258
Query: 229 GFPVDYNRALYSLKMSSLLP--HNFSA--EVEAHYNQKSDIDWEYADKCEK-SMQGWAK- 282
G V L ++ +P H F + A ++ + + A K S+Q K
Sbjct: 259 GIHVGTRNQLEGERICVQVPLFHAFGVVITIMAGLSKGATLVLPAAGFSPKDSLQAIVKE 318
Query: 283 ---TLSSEYNSYAGPVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITPALKGL 339
+ Y V+ +R L PL ++ I ++ KDVK L A+ +
Sbjct: 319 KCTVIHGTPTMYVDLVSTQRKLQVPLGRIKKAITGGAI-VSPQLIKDVKEVLGVEAMHSV 377
Query: 340 YHFKKWMNPKFSTTTRKVALTWPNSMDSEARIYHYKKYLREEENITVPDSAGRSI----- 394
+ + TT + + PN DSE ++ H +L++ V DS G+ +
Sbjct: 378 F--------GLTETTAVIFQSVPN--DSEDKVLHTVGHLQDHVEAKVIDSDGKCVPLGQP 427
Query: 395 -------------------------------FEKDQFVLREDGYGQVVGRIKDMIIRGGE 423
DQFVL +GYG++VGR+K++IIRGGE
Sbjct: 428 GELCVRGYVTMLGYHGDPEKTEETIGKDKWLRTGDQFVLEANGYGRIVGRLKELIIRGGE 487
Query: 424 NIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN---AKLNADDIRTFCKG 480
NI+PKEIE+F+ THP V+EA+ GVPDER+GEE+ ++L E+ A + +R +CKG
Sbjct: 488 NIFPKEIEDFLNTHPQVIEAHVIGVPDERLGEELCAFVRLNEDIDPATFTVEALRAYCKG 547
Query: 481 KVSKF 485
K++ F
Sbjct: 548 KLAHF 552
>gi|195433499|ref|XP_002064748.1| GK15099 [Drosophila willistoni]
gi|194160833|gb|EDW75734.1| GK15099 [Drosophila willistoni]
Length = 588
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 97/154 (62%), Gaps = 37/154 (24%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ KVVD + VPFG PGEL +RG+ MLGY D++KT+ETIG D+WLRTG
Sbjct: 412 EVKVVDADGNCVPFGQPGELCVRGYVTMLGYHGDKEKTEETIGADKWLRTG--------- 462
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
DQFVL+EDGYG++VGR+K+MIIRGGENI+P+E
Sbjct: 463 ----------------------------DQFVLQEDGYGRIVGRLKEMIIRGGENIFPRE 494
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
+E+F+ HP ++EA+ GVPDER+GEE+ ++L
Sbjct: 495 VEDFLNAHPQIVEAHVIGVPDERLGEEIVAFVRL 528
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 50/234 (21%)
Query: 291 YAGPVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITPALKGLYHFKKWMNPKF 350
Y V+ +R L PL ++ I ++ DVK L +++ +Y
Sbjct: 331 YVDLVSAQRELQVPLGRIKKAITGGAI-VSPQLILDVKKVLGVESMRSVY--------GL 381
Query: 351 STTTRKVALTWPNSMDSEARIYHYKKYLREEENITVPDSAGRSI---------------- 394
+ TT + T P D E + H +L++ + V D+ G +
Sbjct: 382 TETTAVIFQTLPG--DDEESVLHTVGHLQDHVEVKVVDADGNCVPFGQPGELCVRGYVTM 439
Query: 395 --------------------FEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFI 434
DQFVL+EDGYG++VGR+K+MIIRGGENI+P+E+E+F+
Sbjct: 440 LGYHGDKEKTEETIGADKWLRTGDQFVLQEDGYGRIVGRLKEMIIRGGENIFPREVEDFL 499
Query: 435 QTHPNVLEAYAYGVPDERMGEEVGISIKLKENA---KLNADDIRTFCKGKVSKF 485
HP ++EA+ GVPDER+GEE+ ++L + + +R + KGK++ F
Sbjct: 500 NAHPQIVEAHVIGVPDERLGEEIVAFVRLHNDVDPKSFTVEALRAYSKGKIAHF 553
>gi|345488226|ref|XP_001605955.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Nasonia vitripennis]
Length = 592
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 100/166 (60%), Gaps = 37/166 (22%)
Query: 16 SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKT 75
S + KV+D +VPFGTPGEL RG+ MLGYW+DE+ T++ I D WL+TG
Sbjct: 409 SDHLEIKVIDEKGEMVPFGTPGELCTRGYSIMLGYWDDEESTRKAIMEDEWLKTG----- 463
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
DQ+VLREDGYG +VGR+KDMIIRGGENI
Sbjct: 464 --------------------------------DQYVLREDGYGIIVGRLKDMIIRGGENI 491
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
YPKEIE F+++HP++LE +A+GV D+ GEE+ ++L+ AK++
Sbjct: 492 YPKEIEHFLESHPSILEVHAFGVHDDVYGEEMCACVRLRSGAKISV 537
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 73/88 (82%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQ+VLREDGYG +VGR+KDMIIRGGENIYPKEIE F+++HP++LE +A+GV D+ GEE+
Sbjct: 464 DQYVLREDGYGIIVGRLKDMIIRGGENIYPKEIEHFLESHPSILEVHAFGVHDDVYGEEM 523
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++L+ AK++ DD+ + KGK++KF
Sbjct: 524 CACVRLRSGAKISVDDVVNYAKGKIAKF 551
>gi|242010698|ref|XP_002426097.1| firefly luciferase, putative [Pediculus humanus corporis]
gi|212510130|gb|EEB13359.1| firefly luciferase, putative [Pediculus humanus corporis]
Length = 582
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 112/208 (53%), Gaps = 38/208 (18%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+AKVVD N + +P+ TPGEL +RG+ M GYW ++KTKETI P+RWL+TG
Sbjct: 406 EAKVVDDNGKTLPWNTPGELWVRGYNIMKGYWSLKEKTKETITPERWLKTG--------- 456
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
DQFVL E+GYG++VGR KD+IIRGGENIYP +
Sbjct: 457 ----------------------------DQFVLLENGYGKIVGRKKDLIIRGGENIYPAD 488
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS-SDYHEFETMY 198
IEEF+ THP++LEA G+PD R+GE+V I+LK N+ L E K +F+ Y
Sbjct: 489 IEEFLSTHPDILEAQVVGLPDPRLGEQVCACIRLKPNSFLTEEEVKEFCKGKIADFKIPY 548
Query: 199 DSIMAHPNRTTPYYQWWSYDPNQSYVTH 226
TP + Y Q + H
Sbjct: 549 YVWFVDKFPITPSAKVQKYKLQQDAIKH 576
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 71/88 (80%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVL E+GYG++VGR KD+IIRGGENIYP +IEEF+ THP++LEA G+PD R+GE+V
Sbjct: 457 DQFVLLENGYGKIVGRKKDLIIRGGENIYPADIEEFLSTHPDILEAQVVGLPDPRLGEQV 516
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK N+ L ++++ FCKGK++ F
Sbjct: 517 CACIRLKPNSFLTEEEVKEFCKGKIADF 544
>gi|260806739|ref|XP_002598241.1| hypothetical protein BRAFLDRAFT_164673 [Branchiostoma floridae]
gi|229283513|gb|EEN54253.1| hypothetical protein BRAFLDRAFT_164673 [Branchiostoma floridae]
Length = 551
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 94/169 (55%), Gaps = 37/169 (21%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD + R+ P TPGEL RG MLGYW+D +KT E IGPDRW TG
Sbjct: 390 EVKIVDTDGRVTPVNTPGELCTRGPGTMLGYWDDPEKTAEVIGPDRWYMTG--------- 440
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D VL E+GYGQ+VGRIKDMIIRGGENIYP+E
Sbjct: 441 ----------------------------DIAVLDEEGYGQIVGRIKDMIIRGGENIYPRE 472
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
IEEF+ THP + + GVPDERMGEEV IKL+E + E ++
Sbjct: 473 IEEFLYTHPKIEDVQVIGVPDERMGEEVCAWIKLREGENMEEDEIRAFC 521
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 68/88 (77%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D VL E+GYGQ+VGRIKDMIIRGGENIYP+EIEEF+ THP + + GVPDERMGEEV
Sbjct: 441 DIAVLDEEGYGQIVGRIKDMIIRGGENIYPREIEEFLYTHPKIEDVQVIGVPDERMGEEV 500
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKL+E + D+IR FCKG++S F
Sbjct: 501 CAWIKLREGENMEEDEIRAFCKGEISHF 528
>gi|195034772|ref|XP_001988972.1| GH11457 [Drosophila grimshawi]
gi|193904972|gb|EDW03839.1| GH11457 [Drosophila grimshawi]
Length = 600
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 97/169 (57%), Gaps = 37/169 (21%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK++D +VP G PGEL +RG+ MLGY DE+KT+E I D W+RTG
Sbjct: 411 IEAKIIDEKGCVVPLGQPGELCVRGYLTMLGYHGDEEKTREIISADNWMRTG-------- 462
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
DQFV+ DGYG++VGR+K+M+IRGGENI+PK
Sbjct: 463 -----------------------------DQFVMEADGYGRIVGRLKEMVIRGGENIFPK 493
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSI 187
E+E+FI THP V+E + GVPDER+GEE+ ++L + + +S+
Sbjct: 494 EVEDFINTHPQVVETHVIGVPDERLGEELCAFVRLHHDVDPKTFTKESL 542
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFV+ DGYG++VGR+K+M+IRGGENI+PKE+E+FI THP V+E + GVPDER+GEE+
Sbjct: 463 DQFVMEADGYGRIVGRLKEMVIRGGENIFPKEVEDFINTHPQVVETHVIGVPDERLGEEL 522
Query: 458 GISIKLKENA---KLNADDIRTFCKGKVSKF 485
++L + + +R + KGK++ F
Sbjct: 523 CAFVRLHHDVDPKTFTKESLREYAKGKIAHF 553
>gi|340728305|ref|XP_003402466.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Bombus terrestris]
Length = 617
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 93/164 (56%), Gaps = 37/164 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+A +VD N VPFGTPGEL IRG+C M+ YW D++ T++T+ D WL TG
Sbjct: 424 EAMIVDENGNTVPFGTPGELWIRGYCTMMKYWNDKEATEKTLTKDGWLMTG--------- 474
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
DQFVLR DGYGQ+VGR+KDMIIRGGENI+PKE
Sbjct: 475 ----------------------------DQFVLRSDGYGQIVGRLKDMIIRGGENIFPKE 506
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
+E+ + THP V EA G DE GEEV ++L+E A L E
Sbjct: 507 VEDVLMTHPLVAEAQVIGAYDEVYGEEVCACVRLQEGASLRKEE 550
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 68/92 (73%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
+ DQFVLR DGYGQ+VGR+KDMIIRGGENI+PKE+E+ + THP V EA G DE
Sbjct: 471 LMTGDQFVLRSDGYGQIVGRLKDMIIRGGENIFPKEVEDVLMTHPLVAEAQVIGAYDEVY 530
Query: 454 GEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
GEEV ++L+E A L +++R +CKG+++ F
Sbjct: 531 GEEVCACVRLQEGASLRKEELREYCKGRMAHF 562
>gi|321477421|gb|EFX88380.1| hypothetical protein DAPPUDRAFT_96055 [Daphnia pulex]
Length = 965
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 111/221 (50%), Gaps = 47/221 (21%)
Query: 8 DLQFSTLS--SSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPD 64
DL+ ST+ + K+VD N IVP TPGE+ RG+ MLGYW KT E I D
Sbjct: 191 DLRCSTIGYPGEHIEVKIVDPQTNDIVPVNTPGEICTRGYNTMLGYWNQPDKTSEIISED 250
Query: 65 RWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRI 124
W+R+G D VL EDGYG++VGRI
Sbjct: 251 GWIRSG-------------------------------------DLGVLNEDGYGKIVGRI 273
Query: 125 KDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
KDMIIRGGEN+YP+EIEE + THP+V EA GVPDER+GEE+ I+ K L++ E
Sbjct: 274 KDMIIRGGENVYPREIEEILHTHPSVQEAQVVGVPDERLGEEICAWIRCKPQTNLDSLEL 333
Query: 185 KSISSDYHEFETMYDSIMAHPNRTTPYYQWWSYDPNQSYVT 225
K + + ++ + HP ++W Y YVT
Sbjct: 334 KRFCLE-KQISLLFAQLCQHP------WEWSKYLVLTLYVT 367
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 103/205 (50%), Gaps = 54/205 (26%)
Query: 1 MWDMNPTDLQFSTLSSSSF--------------QAKVVD-HNNRIVPFGTPGELLIRGHC 45
M + +PT F TL S SF + K+VD N IVP TPGE+ RG+
Sbjct: 760 MTECSPT--TFMTLPSDSFDLRCSTVGYPCEHVEVKIVDPQTNEIVPVNTPGEICTRGYN 817
Query: 46 NMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSL 105
MLGYW KT E I D W+R+G
Sbjct: 818 TMLGYWNQPDKTSEIISEDGWIRSG----------------------------------- 842
Query: 106 VSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGE 165
D VL EDGYG++VGRIKDMIIRGGEN+YP+EIEE + THP+V EA GVPDER+GE
Sbjct: 843 --DLGVLNEDGYGKIVGRIKDMIIRGGENVYPREIEEILHTHPSVQEAQVVGVPDERLGE 900
Query: 166 EVGISIKLKENAKLNAYEDKSISSD 190
E+ I+ K ++ E K S+
Sbjct: 901 EICAWIRCKPQTNSDSLELKRFCSE 925
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 66/92 (71%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
I D VL EDGYG++VGRIKDMIIRGGEN+YP+EIEE + THP+V EA GVPDER+
Sbjct: 839 IRSGDLGVLNEDGYGKIVGRIKDMIIRGGENVYPREIEEILHTHPSVQEAQVVGVPDERL 898
Query: 454 GEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
GEE+ I+ K ++ +++ FC K++ F
Sbjct: 899 GEEICAWIRCKPQTNSDSLELKRFCSEKMAYF 930
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 63/85 (74%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
I D VL EDGYG++VGRIKDMIIRGGEN+YP+EIEE + THP+V EA GVPDER+
Sbjct: 253 IRSGDLGVLNEDGYGKIVGRIKDMIIRGGENVYPREIEEILHTHPSVQEAQVVGVPDERL 312
Query: 454 GEEVGISIKLKENAKLNADDIRTFC 478
GEE+ I+ K L++ +++ FC
Sbjct: 313 GEEICAWIRCKPQTNLDSLELKRFC 337
>gi|332020537|gb|EGI60952.1| Acyl-CoA synthetase family member 2, mitochondrial [Acromyrmex
echinatior]
Length = 566
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 93/164 (56%), Gaps = 37/164 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ +VD N V FG PGEL IRG+C MLGYW+DE+ TK+T+ D WL+TG
Sbjct: 386 ETMIVDENGVAVSFGKPGELWIRGYCTMLGYWDDEENTKKTLTKDGWLKTG--------- 436
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
DQFVL+EDGY VVGR KDMIIRGGENI+PKE
Sbjct: 437 ----------------------------DQFVLQEDGYAIVVGRFKDMIIRGGENIFPKE 468
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
IE+F+ THP +++A G D+ GEEV I+L++ K+ E
Sbjct: 469 IEDFLTTHPKIMQAQIIGAYDKTYGEEVCACIQLRDGVKMTKEE 512
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 66/88 (75%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVL+EDGY VVGR KDMIIRGGENI+PKEIE+F+ THP +++A G D+ GEEV
Sbjct: 437 DQFVLQEDGYAIVVGRFKDMIIRGGENIFPKEIEDFLTTHPKIMQAQIIGAYDKTYGEEV 496
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+L++ K+ +++ +CKGK++ F
Sbjct: 497 CACIQLRDGVKMTKEELVDYCKGKIAHF 524
>gi|195388515|ref|XP_002052925.1| GJ17825 [Drosophila virilis]
gi|194149382|gb|EDW65080.1| GJ17825 [Drosophila virilis]
Length = 598
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 99/171 (57%), Gaps = 37/171 (21%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD IVP G PGEL +RG+ MLGY D +KTKE + D WL TG
Sbjct: 411 IEAKIVDAQGCIVPLGQPGELCVRGYMTMLGYHGDVEKTKEILAEDNWLHTG-------- 462
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
DQFVL DGYG++VGR+K+M+IRGGENI+PK
Sbjct: 463 -----------------------------DQFVLESDGYGRIVGRLKEMVIRGGENIFPK 493
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
E+E+F+ +HP V+E + GVPDER+GEE+ ++L+ + ++ ++++ +
Sbjct: 494 EVEDFLNSHPQVIETHVIGVPDERLGEELCAFVRLESDVDPKSFTNEALKA 544
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 69/91 (75%), Gaps = 3/91 (3%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVL DGYG++VGR+K+M+IRGGENI+PKE+E+F+ +HP V+E + GVPDER+GEE+
Sbjct: 463 DQFVLESDGYGRIVGRLKEMVIRGGENIFPKEVEDFLNSHPQVIETHVIGVPDERLGEEL 522
Query: 458 GISIKLKENA---KLNADDIRTFCKGKVSKF 485
++L+ + + ++ +CKGK++ F
Sbjct: 523 CAFVRLESDVDPKSFTNEALKAYCKGKLAHF 553
>gi|307197304|gb|EFN78596.1| Acyl-CoA synthetase family member 2, mitochondrial [Harpegnathos
saltator]
Length = 549
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 102/178 (57%), Gaps = 39/178 (21%)
Query: 8 DLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
DL +T+ S+ +A VV+ NN VPFGTPGEL +RG+CNM+ YW++E+ T+ T+ +
Sbjct: 350 DLTETTVGHLSNHVEAMVVNENNVPVPFGTPGELWVRGYCNMMYYWDEEENTRNTLTQEG 409
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
WL+TG DQF+L E GYG++VGR+K
Sbjct: 410 WLKTG-------------------------------------DQFILEESGYGKIVGRLK 432
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
DMIIRGGENI+PKEIE+F+ THP +LE G DE GEEV I+L + K+ E
Sbjct: 433 DMIIRGGENIFPKEIEDFLITHPKILEVQVIGAHDEIYGEEVCAGIRLCDGEKMTKDE 490
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 66/88 (75%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQF+L E GYG++VGR+KDMIIRGGENI+PKEIE+F+ THP +LE G DE GEEV
Sbjct: 415 DQFILEESGYGKIVGRLKDMIIRGGENIFPKEIEDFLITHPKILEVQVIGAHDEIYGEEV 474
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+L + K+ D++R +CKGK++ F
Sbjct: 475 CAGIRLCDGEKMTKDELREYCKGKIAHF 502
>gi|321466592|gb|EFX77587.1| hypothetical protein DAPPUDRAFT_54086 [Daphnia pulex]
Length = 577
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 99/175 (56%), Gaps = 39/175 (22%)
Query: 2 WDMNPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKE 59
+ +P +++ ST+ S + KVV+ + IVP TPGEL RG+ NML YW D++KTKE
Sbjct: 382 YSSDPLEVRHSTIGFPSDYTEVKVVNEDGHIVPINTPGELYTRGYSNMLKYWNDDEKTKE 441
Query: 60 TIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQ 119
I DRWLRTG D V+ E+GYGQ
Sbjct: 442 MISVDRWLRTG-------------------------------------DIAVIDENGYGQ 464
Query: 120 VVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
+VGR KDM+IRGGENIYP+EIEE + THP V E + GVPD R+GEEV I+L+
Sbjct: 465 IVGRAKDMLIRGGENIYPREIEELLHTHPAVAEVHVIGVPDVRLGEEVCAWIRLR 519
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 71/110 (64%)
Query: 376 KYLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
KY ++E S R + D V+ E+GYGQ+VGR KDM+IRGGENIYP+EIEE +
Sbjct: 431 KYWNDDEKTKEMISVDRWLRTGDIAVIDENGYGQIVGRAKDMLIRGGENIYPREIEELLH 490
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
THP V E + GVPD R+GEEV I+L+ DD+R FC+ KV+ F
Sbjct: 491 THPAVAEVHVIGVPDVRLGEEVCAWIRLRPGCVATEDDLRNFCRDKVAYF 540
>gi|301620513|ref|XP_002939621.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Xenopus (Silurana) tropicalis]
Length = 846
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 92/170 (54%), Gaps = 38/170 (22%)
Query: 17 SSFQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKT 75
S +AKVVD +I P TPGELLIRG+C MLGYW D ++TKE I P+ W RTG
Sbjct: 669 SHTEAKVVDTTTGQIAPLNTPGELLIRGYCVMLGYWGDPERTKEVITPENWYRTG----- 723
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
D + E GY ++VGR KDMIIRGGENI
Sbjct: 724 --------------------------------DVATMDEYGYCRIVGRCKDMIIRGGENI 751
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
YP EIE+F+ THP+VLEA GV DERMGEEV I+L + E K
Sbjct: 752 YPAEIEDFLHTHPSVLEAQVIGVKDERMGEEVCACIRLYDGKTATPAEIK 801
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY ++VGR KDMIIRGGENIYP EIE+F+ THP+VLEA GV DERMGEEV
Sbjct: 724 DVATMDEYGYCRIVGRCKDMIIRGGENIYPAEIEDFLHTHPSVLEAQVIGVKDERMGEEV 783
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+L + +I+ +CKGK+S F
Sbjct: 784 CACIRLYDGKTATPAEIKEYCKGKISHF 811
>gi|253560534|gb|ACT32978.1| putative acetyl-CoA synthetase [Culex pipiens pipiens]
Length = 189
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 86/145 (59%), Gaps = 37/145 (25%)
Query: 16 SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKT 75
+ ++AKVVD VPFGTPGEL +RG+ MLGYW D +KTKETI D+WLRTG
Sbjct: 82 TDHYEAKVVDSAGNTVPFGTPGELWVRGYGTMLGYWNDPKKTKETIDVDKWLRTG----- 136
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
DQFVLR DGYG++VGRIK++IIRGGENI
Sbjct: 137 --------------------------------DQFVLRADGYGKIVGRIKEVIIRGGENI 164
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPD 160
+PKEIE+F+ HP +LE + VPD
Sbjct: 165 FPKEIEDFLNAHPKILETHCIAVPD 189
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 45/53 (84%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
DQFVLR DGYG++VGRIK++IIRGGENI+PKEIE+F+ HP +LE + VPD
Sbjct: 137 DQFVLRADGYGKIVGRIKEVIIRGGENIFPKEIEDFLNAHPKILETHCIAVPD 189
>gi|322778766|gb|EFZ09182.1| hypothetical protein SINV_03580 [Solenopsis invicta]
Length = 603
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 91/164 (55%), Gaps = 37/164 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+A +VD NN VPFG GEL IR +CNML YW DE+ TK T+ D WL+TG
Sbjct: 423 EAMIVDKNNLPVPFGKSGELWIRSYCNMLCYWNDEEITKRTLTEDGWLKTG--------- 473
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
DQ VL E+GY +VGR+KDM+IRGGENI+P+E
Sbjct: 474 ----------------------------DQAVLEENGYATIVGRLKDMLIRGGENIFPRE 505
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
IE+F+ THP + +A G DE GEEV I+L+ENA + E
Sbjct: 506 IEDFLMTHPKIAQAQVIGAYDEVYGEEVCACIQLRENATMTKNE 549
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 65/88 (73%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQ VL E+GY +VGR+KDM+IRGGENI+P+EIE+F+ THP + +A G DE GEEV
Sbjct: 474 DQAVLEENGYATIVGRLKDMLIRGGENIFPREIEDFLMTHPKIAQAQVIGAYDEVYGEEV 533
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+L+ENA + +++ +CKGK++ F
Sbjct: 534 CACIQLRENATMTKNELTDYCKGKIAHF 561
>gi|307172749|gb|EFN64035.1| Acyl-CoA synthetase family member 2, mitochondrial [Camponotus
floridanus]
Length = 396
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 94/164 (57%), Gaps = 37/164 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+A VVD + V FG PGEL +RG+ NML YW DE+ T++T+ D WL+TG
Sbjct: 220 EAMVVDLHGLPVAFGKPGELWVRGYSNMLNYWNDEENTRKTLTQDGWLKTG--------- 270
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
DQF+L E+GYG ++GR+KDM+IRGGENI+PKE
Sbjct: 271 ----------------------------DQFILHENGYGVIIGRLKDMLIRGGENIFPKE 302
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
IE+F+ THP ++EA G DE GEEV I+L +NAK+ E
Sbjct: 303 IEDFLMTHPKIIEAQVIGAYDEVYGEEVCACIQLSDNAKMTQNE 346
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 68/88 (77%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQF+L E+GYG ++GR+KDM+IRGGENI+PKEIE+F+ THP ++EA G DE GEEV
Sbjct: 271 DQFILHENGYGVIIGRLKDMLIRGGENIFPKEIEDFLMTHPKIIEAQVIGAYDEVYGEEV 330
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+L +NAK+ +++ +CKGK++ F
Sbjct: 331 CACIQLSDNAKMTQNEVIDYCKGKIAHF 358
>gi|350403137|ref|XP_003486710.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Bombus impatiens]
Length = 567
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 91/164 (55%), Gaps = 37/164 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+A VVD N VPFGT GEL IRG+C M+ YW D + T++T+ D WL TG
Sbjct: 377 EAMVVDENGNAVPFGTSGELWIRGYCTMMKYWNDNEATEKTLTKDGWLMTG--------- 427
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
DQFVLR DGYGQ+VGR+KDMIIRGGENI+PKE
Sbjct: 428 ----------------------------DQFVLRSDGYGQIVGRLKDMIIRGGENIFPKE 459
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
+E+ + THP V EA G D+ GE+V ++L+E A L E
Sbjct: 460 VEDVLMTHPLVAEAQVIGAYDKVYGEQVCACVRLQEGASLGREE 503
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
+ DQFVLR DGYGQ+VGR+KDMIIRGGENI+PKE+E+ + THP V EA G D+
Sbjct: 424 LMTGDQFVLRSDGYGQIVGRLKDMIIRGGENIFPKEVEDVLMTHPLVAEAQVIGAYDKVY 483
Query: 454 GEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
GE+V ++L+E A L +++R +CKG+++ F
Sbjct: 484 GEQVCACVRLQEGASLGREELREYCKGRMAPF 515
>gi|383850423|ref|XP_003700795.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Megachile rotundata]
Length = 544
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 94/165 (56%), Gaps = 37/165 (22%)
Query: 16 SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKT 75
++ +A VVD N VP G+PGEL IRG+CNM YW DE+ T++T+ D WL+TG
Sbjct: 360 ANHVEALVVDENGTPVPMGSPGELWIRGYCNMNEYWGDEKNTRKTLTEDGWLKTG----- 414
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
DQF+LR DGYGQ++GR+KDM+IRGGENI
Sbjct: 415 --------------------------------DQFILRSDGYGQIIGRLKDMLIRGGENI 442
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
+PKE+E+ + THP V+EA D+ GEE+ ++LKE A L
Sbjct: 443 FPKEVEDLLMTHPLVVEAQVISAYDKVYGEEICACVRLKEGASLT 487
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 66/88 (75%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQF+LR DGYGQ++GR+KDM+IRGGENI+PKE+E+ + THP V+EA D+ GEE+
Sbjct: 415 DQFILRSDGYGQIIGRLKDMLIRGGENIFPKEVEDLLMTHPLVVEAQVISAYDKVYGEEI 474
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++LKE A L + ++ +CKG+++ F
Sbjct: 475 CACVRLKEGASLTREQLKDYCKGRIAPF 502
>gi|352080679|ref|ZP_08951618.1| AMP-dependent synthetase and ligase [Rhodanobacter sp. 2APBS1]
gi|351683960|gb|EHA67036.1| AMP-dependent synthetase and ligase [Rhodanobacter sp. 2APBS1]
Length = 557
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 91/165 (55%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD RIVP GTPGEL RG+ MLGYWEDE +T+E I RW+ TG
Sbjct: 383 LEVKLVDERGRIVPRGTPGELCTRGYSVMLGYWEDESRTREVIDAARWMHTG-------- 434
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ DGY ++VGR+KDMIIRGGEN+YP+
Sbjct: 435 -----------------------------DLAVIDADGYCRIVGRLKDMIIRGGENVYPR 465
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
EIEEF+ HP VL+ +GVPD + GE+V ++L+E A + E
Sbjct: 466 EIEEFLYAHPKVLDVQVFGVPDTKFGEQVCAWVRLREGAGASEAE 510
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 63/90 (70%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ DGY ++VGR+KDMIIRGGEN+YP+EIEEF+ HP VL+ +GVP
Sbjct: 427 AARWMHTGDLAVIDADGYCRIVGRLKDMIIRGGENVYPREIEEFLYAHPKVLDVQVFGVP 486
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCK 479
D + GE+V ++L+E A + +I+ +C+
Sbjct: 487 DTKFGEQVCAWVRLREGAGASEAEIQDYCR 516
>gi|218563680|ref|NP_001038884.2| acyl-CoA synthetase family member 2, mitochondrial precursor [Danio
rerio]
gi|218749805|ref|NP_001132910.1| acyl-CoA synthetase family member 2, mitochondrial precursor [Danio
rerio]
Length = 606
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 93/172 (54%), Gaps = 38/172 (22%)
Query: 16 SSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKK 74
S +AKVVD IVP G GEL+IRG+C ML YW+DE+KT+E I DRW +TG
Sbjct: 428 SPHTEAKVVDPTTGEIVPLGAQGELMIRGYCVMLEYWQDEEKTRECITKDRWYKTGDIAS 487
Query: 75 TSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGEN 134
DQF Y ++ GRIKD+IIRGGEN
Sbjct: 488 L--------------------------------DQF-----AYCKIEGRIKDLIIRGGEN 510
Query: 135 IYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
IYP EIE+F+ THP +LEA GV DERMGEEV I+LKE + E K+
Sbjct: 511 IYPAEIEQFLHTHPKILEAQVVGVKDERMGEEVCACIRLKEGQECTVEEIKA 562
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 5/92 (5%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
I DQF Y ++ GRIKD+IIRGGENIYP EIE+F+ THP +LEA GV DERM
Sbjct: 485 IASLDQF-----AYCKIEGRIKDLIIRGGENIYPAEIEQFLHTHPKILEAQVVGVKDERM 539
Query: 454 GEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
GEEV I+LKE + ++I+ +CKGK++ +
Sbjct: 540 GEEVCACIRLKEGQECTVEEIKAYCKGKIAHY 571
>gi|123914455|sp|Q0P4F7.1|ACSF2_DANRE RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|112418669|gb|AAI22099.1| Acyl-CoA synthetase family member 2 [Danio rerio]
Length = 606
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 93/172 (54%), Gaps = 38/172 (22%)
Query: 16 SSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKK 74
S +AKVVD IVP G GEL+IRG+C ML YW+DE+KT+E I DRW +TG
Sbjct: 428 SPHTEAKVVDPTTGEIVPLGAQGELMIRGYCVMLEYWQDEEKTRECITKDRWYKTGDIAS 487
Query: 75 TSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGEN 134
DQF Y ++ GRIKD+IIRGGEN
Sbjct: 488 L--------------------------------DQF-----AYCKIEGRIKDLIIRGGEN 510
Query: 135 IYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
IYP EIE+F+ THP +LEA GV DERMGEEV I+LKE + E K+
Sbjct: 511 IYPAEIEQFLHTHPKILEAQVVGVKDERMGEEVCACIRLKEGQECTVEEIKA 562
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 5/92 (5%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
I DQF Y ++ GRIKD+IIRGGENIYP EIE+F+ THP +LEA GV DERM
Sbjct: 485 IASLDQF-----AYCKIEGRIKDLIIRGGENIYPAEIEQFLHTHPKILEAQVVGVKDERM 539
Query: 454 GEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
GEEV I+LKE + ++I+ +CKGK++ +
Sbjct: 540 GEEVCACIRLKEGQECTVEEIKAYCKGKIAHY 571
>gi|332801003|ref|NP_001193902.1| acyl-CoA synthetase family member 2, mitochondrial precursor [Apis
mellifera]
Length = 608
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 99/192 (51%), Gaps = 46/192 (23%)
Query: 16 SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKT 75
S + KVVD N + VPFGT GEL RG+ NM+ Y+ DE+ TK++I D W +TG
Sbjct: 426 SDHIEVKVVDENGKTVPFGTRGELWSRGYSNMIEYYNDEEATKKSITKDGWFKTG----- 480
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
DQF+LR DGYGQ+VGR+K+MIIRGGENI
Sbjct: 481 --------------------------------DQFILRSDGYGQIVGRLKEMIIRGGENI 508
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD----- 190
+PKEIE+ I HP V E G DE GEE+ ++L++ AKL E K +
Sbjct: 509 FPKEIEDVIMMHPLVAEVQVIGAYDEVYGEELCACVRLRDGAKLEKEELKEFCASQMASF 568
Query: 191 ----YHEFETMY 198
Y EF T Y
Sbjct: 569 KIPHYVEFVTEY 580
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 64/88 (72%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQF+LR DGYGQ+VGR+K+MIIRGGENI+PKEIE+ I HP V E G DE GEE+
Sbjct: 481 DQFILRSDGYGQIVGRLKEMIIRGGENIFPKEIEDVIMMHPLVAEVQVIGAYDEVYGEEL 540
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++L++ AKL ++++ FC +++ F
Sbjct: 541 CACVRLRDGAKLEKEELKEFCASQMASF 568
>gi|389797499|ref|ZP_10200540.1| acyl-CoA synthetase [Rhodanobacter sp. 116-2]
gi|388447131|gb|EIM03144.1| acyl-CoA synthetase [Rhodanobacter sp. 116-2]
Length = 557
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 90/165 (54%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD IVP GTPGEL RG+ MLGYWEDE +T+E I RW+ TG
Sbjct: 383 LEVKLVDERGLIVPRGTPGELCTRGYSVMLGYWEDESRTREVIDAARWMHTG-------- 434
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ DGY ++VGR+KDMIIRGGEN+YP+
Sbjct: 435 -----------------------------DLAVIDADGYCRIVGRLKDMIIRGGENVYPR 465
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
E+EEF+ HP VL+ +GVPD + GE+V ++L+E A + E
Sbjct: 466 EVEEFLYAHPKVLDVQVFGVPDTKFGEQVCAWVRLREGAGASEAE 510
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 63/90 (70%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ DGY ++VGR+KDMIIRGGEN+YP+E+EEF+ HP VL+ +GVP
Sbjct: 427 AARWMHTGDLAVIDADGYCRIVGRLKDMIIRGGENVYPREVEEFLYAHPKVLDVQVFGVP 486
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCK 479
D + GE+V ++L+E A + +I+ +C+
Sbjct: 487 DTKFGEQVCAWVRLREGAGASEAEIQDYCR 516
>gi|357614727|gb|EHJ69239.1| hypothetical protein KGM_05978 [Danaus plexippus]
Length = 517
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 96/167 (57%), Gaps = 37/167 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ KVVD N+ IVPFG GEL+++G+ NM+ Y +D +KTKE + D WL TG
Sbjct: 344 VELKVVDSNSNIVPFGCSGELMVKGYNNMICYLDDPEKTKEIMTEDGWLHTG-------- 395
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D F++ DGYG+++GR KD+I+RGGENI PK
Sbjct: 396 -----------------------------DIFIINPDGYGKIIGRAKDIIVRGGENIAPK 426
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
EIE+ + THP+V+E+ GV DER+GEE+ ++++ENA + + K
Sbjct: 427 EIEDCLNTHPDVIESQVIGVSDERLGEELCAVVRIRENATFTSNDLK 473
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 66/88 (75%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D F++ DGYG+++GR KD+I+RGGENI PKEIE+ + THP+V+E+ GV DER+GEE+
Sbjct: 396 DIFIINPDGYGKIIGRAKDIIVRGGENIAPKEIEDCLNTHPDVIESQVIGVSDERLGEEL 455
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++++ENA ++D++ GK++ F
Sbjct: 456 CAVVRIRENATFTSNDLKKHFMGKLATF 483
>gi|119899356|ref|YP_934569.1| AMP-binding protein [Azoarcus sp. BH72]
gi|119671769|emb|CAL95683.1| Long-chain fatty-acid-CoA ligase [Azoarcus sp. BH72]
Length = 562
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 102/184 (55%), Gaps = 39/184 (21%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + ST+ + K++D++ RIVP G PGEL RG+ MLGYW+DE KT+E +
Sbjct: 366 DPLERRVSTVGRIQPHCEVKIIDNDGRIVPRGMPGELCTRGYSVMLGYWDDEAKTREALD 425
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ TG D V+ ++GY +VG
Sbjct: 426 AAGWMHTG-------------------------------------DLAVIDDEGYCNIVG 448
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
RIKDM+IRGGENIYP+EIEEF+ HP +L+ GVPD++ GEE+ I L+E A+L+A
Sbjct: 449 RIKDMVIRGGENIYPREIEEFLYRHPQILDVQVVGVPDQKYGEELCAWIILREGAELSAN 508
Query: 183 EDKS 186
+ ++
Sbjct: 509 DVRA 512
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 73/98 (74%), Gaps = 1/98 (1%)
Query: 388 DSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYG 447
D+AG + D V+ ++GY +VGRIKDM+IRGGENIYP+EIEEF+ HP +L+ G
Sbjct: 425 DAAG-WMHTGDLAVIDDEGYCNIVGRIKDMVIRGGENIYPREIEEFLYRHPQILDVQVVG 483
Query: 448 VPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
VPD++ GEE+ I L+E A+L+A+D+R +C+G+++ +
Sbjct: 484 VPDQKYGEELCAWIILREGAELSANDVRAYCQGQIAHY 521
>gi|91771937|gb|ABE60814.1| cxpwmw01 [Periplaneta americana]
Length = 273
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 99/175 (56%), Gaps = 37/175 (21%)
Query: 16 SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKT 75
+ + KVVD R+VP GTPG+L +RG+ MLGYW DE+KT+E +G D W +TG
Sbjct: 94 APHIEVKVVDKEGRMVPMGTPGQLCVRGYSVMLGYWNDEEKTREYMGRDGWAKTG----- 148
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
D+FVL E G+G++VGRIKD+IIR G+ I
Sbjct: 149 --------------------------------DEFVLEEGGWGRIVGRIKDVIIRIGDKI 176
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
+P E+E+F HP+V+E +GVPD R+GEE+ + +++++ A L + ++ D
Sbjct: 177 FPAEMEDFFMEHPDVMEVEVFGVPDPRVGEEICVYLRVRDGAILTEDDIRNYCKD 231
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 67/88 (76%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+FVL E G+G++VGRIKD+IIR G+ I+P E+E+F HP+V+E +GVPD R+GEE+
Sbjct: 149 DEFVLEEGGWGRIVGRIKDVIIRIGDKIFPAEMEDFFMEHPDVMEVEVFGVPDPRVGEEI 208
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ +++++ A L DDIR +CK K+ ++
Sbjct: 209 CVYLRVRDGAILTEDDIRNYCKDKLPEY 236
>gi|389730176|ref|ZP_10189351.1| acyl-CoA synthetase [Rhodanobacter sp. 115]
gi|388440948|gb|EIL97268.1| acyl-CoA synthetase [Rhodanobacter sp. 115]
Length = 561
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 91/164 (55%), Gaps = 37/164 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD + RIVP G PGEL RG+ MLGYW+DE +T+E I W+ TG
Sbjct: 384 EVKLVDADGRIVPRGEPGELCTRGYSVMLGYWQDEARTREAIDAAGWMHTG--------- 434
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D L +DGY ++VGR+KDMIIRGGEN+YP+E
Sbjct: 435 ----------------------------DLATLDDDGYCRIVGRLKDMIIRGGENVYPRE 466
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
IEEF+ THP VL+ +GVPD + GE+V ++L+E + + E
Sbjct: 467 IEEFLYTHPKVLDVQVFGVPDAKFGEQVCAWVRLREGTQASEAE 510
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
Query: 388 DSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYG 447
D+AG + D L +DGY ++VGR+KDMIIRGGEN+YP+EIEEF+ THP VL+ +G
Sbjct: 426 DAAG-WMHTGDLATLDDDGYCRIVGRLKDMIIRGGENVYPREIEEFLYTHPKVLDVQVFG 484
Query: 448 VPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
VPD + GE+V ++L+E + + +I+ +C+ +++ +
Sbjct: 485 VPDAKFGEQVCAWVRLREGTQASEAEIQDYCRRRLAYY 522
>gi|389810714|ref|ZP_10205979.1| acyl-CoA synthetase [Rhodanobacter thiooxydans LCS2]
gi|388440574|gb|EIL96936.1| acyl-CoA synthetase [Rhodanobacter thiooxydans LCS2]
Length = 557
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 90/165 (54%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD RIVP GTPGEL RG+ MLGYWED ++T+E I RW+ TG
Sbjct: 383 LEVKLVDERGRIVPRGTPGELCTRGYSVMLGYWEDAERTREVIDEARWMHTG-------- 434
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L DGY ++VGR+KDMIIRGGENI P+
Sbjct: 435 -----------------------------DLATLDADGYCRIVGRLKDMIIRGGENISPR 465
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
E+EEF+ T+P VL+ +GVPD + GE+V I+L++ A + E
Sbjct: 466 EVEEFLYTYPKVLDVQVFGVPDAKFGEQVCAWIRLRDGATASVAE 510
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 61/89 (68%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D L DGY ++VGR+KDMIIRGGENI P+E+EEF+ T+P VL+ +GVPD
Sbjct: 428 ARWMHTGDLATLDADGYCRIVGRLKDMIIRGGENISPREVEEFLYTYPKVLDVQVFGVPD 487
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCK 479
+ GE+V I+L++ A + +I+ +C+
Sbjct: 488 AKFGEQVCAWIRLRDGATASVAEIQDYCR 516
>gi|405976077|gb|EKC40598.1| Acyl-CoA synthetase family member 2, mitochondrial [Crassostrea
gigas]
Length = 606
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 96/184 (52%), Gaps = 39/184 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + +T+ S + KV+ N I P GTPGEL RG+ ML YW++ KTKE I
Sbjct: 410 DPAEKRVATVGKPHSHVECKVIAENGEICPIGTPGELCTRGYNTMLYYWDEPTKTKEAIS 469
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
DRW TG D + EDG+ ++VG
Sbjct: 470 LDRWYHTG-------------------------------------DIAQMDEDGFCKIVG 492
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
RIKDMIIRGGEN+YP EIE+ I HP V + GVPDER+GEE+ I++KEN ++
Sbjct: 493 RIKDMIIRGGENVYPTEIEQLIYKHPKVKDVQVVGVPDERLGEEICAWIQVKENQSISED 552
Query: 183 EDKS 186
E KS
Sbjct: 553 EIKS 556
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 65/84 (77%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ EDG+ ++VGRIKDMIIRGGEN+YP EIE+ I HP V + GVPDER+GEE+ I
Sbjct: 482 MDEDGFCKIVGRIKDMIIRGGENVYPTEIEQLIYKHPKVKDVQVVGVPDERLGEEICAWI 541
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
++KEN ++ D+I+++CK K++++
Sbjct: 542 QVKENQSISEDEIKSYCKEKLARY 565
>gi|345312433|ref|XP_001517481.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like,
partial [Ornithorhynchus anatinus]
Length = 209
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 87/169 (51%), Gaps = 37/169 (21%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ +V ++P GTPGEL RG+C MLGYW D QKT E I D W RTG
Sbjct: 36 EGSLVSMEGTVLPLGTPGELQTRGYCVMLGYWGDPQKTHEAISEDGWYRTG--------- 86
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D +L E G+ ++VGR KDMIIRGGENIYP E
Sbjct: 87 ----------------------------DMAILDEHGFCKIVGRYKDMIIRGGENIYPAE 118
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
+E+F+ HP V EA GV D+RMGEE+ ++LKE + A E K+
Sbjct: 119 LEDFLHRHPQVQEAQVVGVKDQRMGEEICACLRLKEGQRSTAEEIKAFC 167
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 64/88 (72%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D +L E G+ ++VGR KDMIIRGGENIYP E+E+F+ HP V EA GV D+RMGEE+
Sbjct: 87 DMAILDEHGFCKIVGRYKDMIIRGGENIYPAELEDFLHRHPQVQEAQVVGVKDQRMGEEI 146
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++LKE + A++I+ FCKGK+S F
Sbjct: 147 CACLRLKEGQRSTAEEIKAFCKGKISHF 174
>gi|433608182|ref|YP_007040551.1| putative acyl-CoA synthetase [Saccharothrix espanaensis DSM 44229]
gi|407886035|emb|CCH33678.1| putative acyl-CoA synthetase [Saccharothrix espanaensis DSM 44229]
Length = 554
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 87/161 (54%), Gaps = 38/161 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + R VP GTPGEL RG+ MLGYWE KT E I P RW+ TG
Sbjct: 369 LEVKVVDPEHGRTVPRGTPGELCTRGYSVMLGYWEQPDKTAEAIDPARWMHTG------- 421
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ +DGY + GRIKDM+IRGGEN+YP
Sbjct: 422 ------------------------------DLAVMDDDGYVSITGRIKDMVIRGGENVYP 451
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP+VL+A GVPD + GEE+ ++L+ A
Sbjct: 452 REIEEFLHTHPDVLDAQVIGVPDAKYGEELMAWLRLRPGAA 492
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D V+ +DGY + GRIKDM+IRGGEN+YP+EIEEF+ THP+VL+A GVPD
Sbjct: 415 ARWMHTGDLAVMDDDGYVSITGRIKDMVIRGGENVYPREIEEFLHTHPDVLDAQVIGVPD 474
Query: 451 ERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
+ GEE+ ++L+ A L A+ +R FC G+++ +
Sbjct: 475 AKYGEELMAWLRLRPGAAPLTAEAVREFCAGELAHY 510
>gi|326331582|ref|ZP_08197872.1| substrate--CoA ligase [Nocardioidaceae bacterium Broad-1]
gi|325950838|gb|EGD42888.1| substrate--CoA ligase [Nocardioidaceae bacterium Broad-1]
Length = 542
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 90/165 (54%), Gaps = 38/165 (23%)
Query: 15 SSSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYK 73
++ + K+VD +VP GT GE RG+ MLGYW+D+ KT E I D W+ TG
Sbjct: 362 AAPHVEIKIVDPATGAVVPRGTAGEFCTRGYSVMLGYWDDDTKTAEAIDADGWMHTG--- 418
Query: 74 KTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGE 133
D V+REDGY VVGRIKDM+IRGGE
Sbjct: 419 ----------------------------------DLAVMREDGYCVVVGRIKDMVIRGGE 444
Query: 134 NIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
NIYP+EIEEF+ THP++ EA GVPDER GEE+ I+++ A+
Sbjct: 445 NIYPREIEEFLFTHPDIAEAQVVGVPDERYGEELCAWIRMRPGAE 489
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+REDGY VVGRIKDM+IRGGENIYP+EIEEF+ THP++ EA GVPDER GEE+
Sbjct: 419 DLAVMREDGYCVVVGRIKDMVIRGGENIYPREIEEFLFTHPDIAEAQVVGVPDERYGEEL 478
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSKF 485
I+++ A+ L+A +R F GK++ +
Sbjct: 479 CAWIRMRPGAEPLDAAAVRAFADGKLAHY 507
>gi|358638274|dbj|BAL25571.1| acetyl-CoA synthetase [Azoarcus sp. KH32C]
Length = 584
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 95/178 (53%), Gaps = 39/178 (21%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + ST+ + K+VD+ RIVP GTPGEL RG+ MLGYW DE KT+E +
Sbjct: 388 DPIDRRVSTVGRVQPHLEVKIVDNEGRIVPRGTPGELCTRGYSVMLGYWGDEAKTREAVD 447
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
RW+ TG D + ++G+ +VG
Sbjct: 448 AGRWMHTG-------------------------------------DLATIDDEGFCNIVG 470
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
RIKDM+IRGGEN+YP+EIEEF+ HP +L+ GVPD++ GEE+ + ++E L+
Sbjct: 471 RIKDMVIRGGENLYPREIEEFLYRHPKILDVQVVGVPDQKYGEELCAWVIVREGQTLS 528
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 68/96 (70%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
AGR + D + ++G+ +VGRIKDM+IRGGEN+YP+EIEEF+ HP +L+ GVP
Sbjct: 448 AGRWMHTGDLATIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKILDVQVVGVP 507
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
D++ GEE+ + ++E L+ D++R FCKG+++ +
Sbjct: 508 DQKYGEELCAWVIVREGQTLSEDEVREFCKGQIAHY 543
>gi|148557266|ref|YP_001264848.1| AMP-dependent synthetase and ligase [Sphingomonas wittichii RW1]
gi|148502456|gb|ABQ70710.1| AMP-dependent synthetase and ligase [Sphingomonas wittichii RW1]
Length = 539
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 90/162 (55%), Gaps = 39/162 (24%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ ST+ +AKVVD + ++VP G PGEL RG+ MLGYW D +KT + I +
Sbjct: 347 ELRVSTVGQVQPHLEAKVVDADGKVVPLGEPGELCTRGYSVMLGYWGDPEKTADVIDAEG 406
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D L E GYG++VGRIK
Sbjct: 407 WMHTG-------------------------------------DLATLDEQGYGRIVGRIK 429
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
DMIIRGGENIYP+EIEE + THP++++A +GVPD + GEEV
Sbjct: 430 DMIIRGGENIYPREIEEHLLTHPDIVDAQIFGVPDAKFGEEV 471
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E GYG++VGRIKDMIIRGGENIYP+EIEE + THP++++A +GVPD + GEEV
Sbjct: 412 DLATLDEQGYGRIVGRIKDMIIRGGENIYPREIEEHLLTHPDIVDAQIFGVPDAKFGEEV 471
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ + + L+ + + C+ +++ +
Sbjct: 472 -CAWVISRSGALSVEAVIAHCRDRIAHY 498
>gi|348509256|ref|XP_003442166.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Oreochromis niloticus]
Length = 609
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 87/170 (51%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AKVVD IVP G GELLIRG C M GYW++ +KT+E I DRW RTG
Sbjct: 435 EAKVVDPTTGEIVPLGASGELLIRGSCVMHGYWDEPEKTREVISQDRWYRTG-------- 486
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L GY + GRIKDMIIRGGENIYP
Sbjct: 487 -----------------------------DTASLNSLGYCSIEGRIKDMIIRGGENIYPA 517
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
EIE+F+ HP V E GV DER+GE+V IKLKE +A E ++
Sbjct: 518 EIEQFLYKHPKVKEVQVVGVKDERLGEQVCACIKLKEGQSSSAEEIRAFC 567
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L GY + GRIKDMIIRGGENIYP EIE+F+ HP V E GV DER+GE+V
Sbjct: 487 DTASLNSLGYCSIEGRIKDMIIRGGENIYPAEIEQFLYKHPKVKEVQVVGVKDERLGEQV 546
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKLKE +A++IR FCKG++S F
Sbjct: 547 CACIKLKEGQSSSAEEIRAFCKGQLSHF 574
>gi|54026121|ref|YP_120363.1| AMP-binding protein [Nocardia farcinica IFM 10152]
gi|54017629|dbj|BAD58999.1| putative acyl-CoA synthetase [Nocardia farcinica IFM 10152]
Length = 555
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 89/161 (55%), Gaps = 38/161 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD R VP G PGEL RG+ MLGYW++ +KT E I RW+ TG
Sbjct: 377 LEVKIVDPATGRTVPRGEPGELCTRGYSVMLGYWDEPEKTAEAIDAARWMHTG------- 429
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ EDGY V GRIKDM+IRGGENIYP
Sbjct: 430 ------------------------------DIGVMDEDGYVAVTGRIKDMVIRGGENIYP 459
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPDER GEE+ I+++E A+
Sbjct: 460 REIEEFLYTHPDILDAQVIGVPDERYGEELMAWIRMREGAE 500
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E A R + D V+ EDGY V GRIKDM+IRGGENIYP+EIEEF+ T
Sbjct: 409 YWDEPEKTAEAIDAARWMHTGDIGVMDEDGYVAVTGRIKDMVIRGGENIYPREIEEFLYT 468
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
HP++L+A GVPDER GEE+ I+++E A+ L+A +R FC GK++ F
Sbjct: 469 HPDILDAQVIGVPDERYGEELMAWIRMREGAEPLDAAAVREFCTGKLAHF 518
>gi|348522504|ref|XP_003448764.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Oreochromis niloticus]
Length = 576
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 92/171 (53%), Gaps = 42/171 (24%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+AK+VD +VP GT GE++IRG+C ML YW+D+ KT E I DRW +TG
Sbjct: 401 LEAKIVDPTTGMVVPLGTSGEIMIRGYCVMLEYWDDKAKTDECITKDRWYKTG------- 453
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYG--QVVGRIKDMIIRGGENI 135
IG R D YG ++ GRIKD+IIRGGEN+
Sbjct: 454 --------------------DIG------------RMDAYGYCRIDGRIKDLIIRGGENV 481
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
YP EIE+F+ THP V EA GV DERMGEE+ IKL + A A E K+
Sbjct: 482 YPAEIEQFLHTHPKVKEAQVVGVKDERMGEEICACIKLVDGADCTAEEIKA 532
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 60/80 (75%)
Query: 406 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
GY ++ GRIKD+IIRGGEN+YP EIE+F+ THP V EA GV DERMGEE+ IKL +
Sbjct: 462 GYCRIDGRIKDLIIRGGENVYPAEIEQFLHTHPKVKEAQVVGVKDERMGEEICACIKLVD 521
Query: 466 NAKLNADDIRTFCKGKVSKF 485
A A++I+ +CKG++S F
Sbjct: 522 GADCTAEEIKAYCKGQISHF 541
>gi|380011934|ref|XP_003690047.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Apis florea]
Length = 351
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 92/173 (53%), Gaps = 37/173 (21%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A VVD N + VPFGTPGEL RG+ NM+ Y+ DE+ T++++ D W +TG
Sbjct: 172 IEAMVVDENGKAVPFGTPGELWTRGYMNMIEYYNDEEATRKSVTKDGWFKTG-------- 223
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
DQFVLR DGYG +VGR+K+M+IRGGENI+PK
Sbjct: 224 -----------------------------DQFVLRSDGYGHIVGRLKEMVIRGGENIFPK 254
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDY 191
EIE+ I HP V E D+ GEE+ +++++ AKL E K Y
Sbjct: 255 EIEDVIMMHPLVAEVQVIAAYDKIYGEELCACVRVRDGAKLGKEELKEYCKRY 307
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQFVLR DGYG +VGR+K+M+IRGGENI+PKEIE+ I HP V E D+ GEE+
Sbjct: 224 DQFVLRSDGYGHIVGRLKEMVIRGGENIFPKEIEDVIMMHPLVAEVQVIAAYDKIYGEEL 283
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+++++ AKL ++++ +CK ++ F
Sbjct: 284 CACVRVRDGAKLGKEELKEYCKRYIAPF 311
>gi|345805217|ref|XP_537673.3| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Canis lupus familiaris]
Length = 642
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 89/170 (52%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ +V TPGEL IRG+C MLGYW + +KTKE IGPD+W RTG
Sbjct: 468 EAQIVNMKTGNLVELNTPGELFIRGYCVMLGYWGEPEKTKEAIGPDKWYRTG-------- 519
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + + G+ ++VGR KDMIIRGGENIYP
Sbjct: 520 -----------------------------DIAAIDKQGFCKIVGRSKDMIIRGGENIYPA 550
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F HP VLE GV D RMGEE+ I+LK+ K E K+
Sbjct: 551 ELEDFFHKHPQVLEVQVVGVKDARMGEEICACIRLKKGEKTTEEEIKAFC 600
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + + G+ ++VGR KDMIIRGGENIYP E+E+F HP VLE GV D RMGEE+
Sbjct: 520 DIAAIDKQGFCKIVGRSKDMIIRGGENIYPAELEDFFHKHPQVLEVQVVGVKDARMGEEI 579
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ K ++I+ FCKGK+S F
Sbjct: 580 CACIRLKKGEKTTEEEIKAFCKGKISHF 607
>gi|386058544|ref|YP_005975066.1| AMP-binding protein [Pseudomonas aeruginosa M18]
gi|347304850|gb|AEO74964.1| AMP-binding domain protein [Pseudomonas aeruginosa M18]
Length = 564
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 90/168 (53%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD R+VP G GEL RG+ MLGYW D Q T E I P R
Sbjct: 369 ELRVTTVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPAR 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+RTG D V+ +DGY ++VGR K
Sbjct: 429 WMRTG-------------------------------------DLAVMDDDGYVRIVGRSK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+PDER GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKL 499
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +DGY ++VGR KDMIIRGGENIYP+E+EEF THP V + G+PDER GEE+
Sbjct: 434 DLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKL + + +R FCK +++ F
Sbjct: 494 VAWIKLHPGHHADDEQLRAFCKARIAHF 521
>gi|327265061|ref|XP_003217327.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Anolis carolinensis]
Length = 727
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 89/167 (53%), Gaps = 38/167 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+ D I+P TPGEL IRG+C MLGYW D QKT E + ++W +TG
Sbjct: 553 EAKIEDPETEEILPLNTPGELQIRGYCVMLGYWGDPQKTNEVMDDEKWYKTG-------- 604
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D +L E GY ++VGR KDMIIRGGENIYP
Sbjct: 605 -----------------------------DIAILDEYGYCKIVGRCKDMIIRGGENIYPA 635
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
E+E+F+ THP + E GV DERMGEE+ S+++K + A E K
Sbjct: 636 ELEQFLHTHPKIQEVQVVGVKDERMGEEICASVRVKAGKECTAEEIK 682
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 64/88 (72%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D +L E GY ++VGR KDMIIRGGENIYP E+E+F+ THP + E GV DERMGEE+
Sbjct: 605 DIAILDEYGYCKIVGRCKDMIIRGGENIYPAELEQFLHTHPKIQEVQVVGVKDERMGEEI 664
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
S+++K + A++I+ FCKGK++ F
Sbjct: 665 CASVRVKAGKECTAEEIKEFCKGKIAHF 692
>gi|224825723|ref|ZP_03698827.1| AMP-dependent synthetase and ligase [Pseudogulbenkiania
ferrooxidans 2002]
gi|224601947|gb|EEG08126.1| AMP-dependent synthetase and ligase [Pseudogulbenkiania
ferrooxidans 2002]
Length = 562
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 95/186 (51%), Gaps = 39/186 (20%)
Query: 5 NPTDLQFST--LSSSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
P + + ST L + K+VD RIVP G GELL RG+ MLGYW+DE KT+E I
Sbjct: 366 TPVERKVSTVGLIHPHLEVKIVDGEGRIVPRGETGELLTRGYSVMLGYWDDEPKTREAID 425
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
P W+ TG D V+ E GY +VG
Sbjct: 426 PAGWMHTG-------------------------------------DLAVIDEAGYCNIVG 448
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R KDM+IRGGEN+YP+EIEEF+ HP + + GVPD+R GEE+ I+L++ +A
Sbjct: 449 RAKDMVIRGGENVYPREIEEFLYRHPKIQDVQVIGVPDDRFGEELCAWIRLRDGETASAD 508
Query: 183 EDKSIS 188
E ++
Sbjct: 509 EIRAFC 514
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY +VGR KDM+IRGGEN+YP+EIEEF+ HP + + GVPD+R GEE+
Sbjct: 434 DLAVIDEAGYCNIVGRAKDMVIRGGENVYPREIEEFLYRHPKIQDVQVIGVPDDRFGEEL 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+L++ +AD+IR FC+G+++ +
Sbjct: 494 CAWIRLRDGETASADEIRAFCQGQIAHY 521
>gi|347540717|ref|YP_004848142.1| acyl-CoA synthetase [Pseudogulbenkiania sp. NH8B]
gi|345643895|dbj|BAK77728.1| acyl-CoA synthetase [Pseudogulbenkiania sp. NH8B]
Length = 562
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 94/186 (50%), Gaps = 39/186 (20%)
Query: 5 NPTDLQFST--LSSSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
P + + ST L + K+VD RIVP G GELL RG+ MLGYW+DE KT+E I
Sbjct: 366 TPVERKVSTVGLIHPHLEVKIVDGEGRIVPRGETGELLTRGYSVMLGYWDDEPKTREAID 425
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
P W+ TG D V+ E GY +VG
Sbjct: 426 PAGWMHTG-------------------------------------DLAVIDETGYCNIVG 448
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R KDM+IRGGEN+YP+EIEEF+ HP + + GVPD+R GEE+ I+L++ A
Sbjct: 449 RAKDMVIRGGENVYPREIEEFLYRHPKIQDVQVIGVPDDRFGEELCAWIRLRDGETATAD 508
Query: 183 EDKSIS 188
E ++
Sbjct: 509 EIRAFC 514
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY +VGR KDM+IRGGEN+YP+EIEEF+ HP + + GVPD+R GEE+
Sbjct: 434 DLAVIDETGYCNIVGRAKDMVIRGGENVYPREIEEFLYRHPKIQDVQVIGVPDDRFGEEL 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+L++ AD+IR FC+G+++ +
Sbjct: 494 CAWIRLRDGETATADEIRAFCQGQIAHY 521
>gi|217969185|ref|YP_002354419.1| AMP-binding domain-containing protein [Thauera sp. MZ1T]
gi|217506512|gb|ACK53523.1| AMP-dependent synthetase and ligase [Thauera sp. MZ1T]
Length = 576
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 93/178 (52%), Gaps = 39/178 (21%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + ST+ + K+VD+ RIVP G GEL RG+ MLGYW+DE +TKE I
Sbjct: 380 DPIDRRVSTVGRIQPHLEVKIVDNEGRIVPRGQSGELCTRGYSVMLGYWDDEARTKEAID 439
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ TG D V+ ++GY +VG
Sbjct: 440 AGGWMHTG-------------------------------------DLAVIDDEGYCNIVG 462
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
RIKDM+IRGGENIYP+EIEEF+ HP VL+ G+PD++ GEE+ I +E +L
Sbjct: 463 RIKDMVIRGGENIYPREIEEFLYAHPKVLDVQVVGIPDQKFGEELCAWIIPREGERLT 520
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 67/96 (69%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
AG + D V+ ++GY +VGRIKDM+IRGGENIYP+EIEEF+ HP VL+ G+P
Sbjct: 440 AGGWMHTGDLAVIDDEGYCNIVGRIKDMVIRGGENIYPREIEEFLYAHPKVLDVQVVGIP 499
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
D++ GEE+ I +E +L D++R +CKG+++ +
Sbjct: 500 DQKFGEELCAWIIPREGERLTEDEVREYCKGQIAHY 535
>gi|269836393|ref|YP_003318621.1| AMP-dependent synthetase and ligase [Sphaerobacter thermophilus DSM
20745]
gi|269785656|gb|ACZ37799.1| AMP-dependent synthetase and ligase [Sphaerobacter thermophilus DSM
20745]
Length = 546
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 89/166 (53%), Gaps = 38/166 (22%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K++D IVP GTPGEL RG+ MLGYW +E+ T++ I RW+ TG
Sbjct: 362 IEVKIIDPATGEIVPRGTPGELCTRGYSVMLGYWNNEEATRQAIDAARWMHTG------- 414
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + ++GY +VGRIKDMIIRGGENIYP
Sbjct: 415 ------------------------------DLATMDDEGYVNIVGRIKDMIIRGGENIYP 444
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
+E+EEF+ THP V + GVPDER GEEV +KL+E A++ E
Sbjct: 445 REVEEFLYTHPAVADVQVIGVPDERYGEEVMAWVKLREGAQVTGEE 490
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 71/109 (65%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y EE A R + D + ++GY +VGRIKDMIIRGGENIYP+E+EEF+ T
Sbjct: 394 YWNNEEATRQAIDAARWMHTGDLATMDDEGYVNIVGRIKDMIIRGGENIYPREVEEFLYT 453
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
HP V + GVPDER GEEV +KL+E A++ +++ +C+G+++ +
Sbjct: 454 HPAVADVQVIGVPDERYGEEVMAWVKLREGAQVTGEELAAYCRGRIATY 502
>gi|427430670|ref|ZP_18920432.1| Acetoacetyl-CoA synthetase [Caenispirillum salinarum AK4]
gi|425878639|gb|EKV27353.1| Acetoacetyl-CoA synthetase [Caenispirillum salinarum AK4]
Length = 566
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 86/158 (54%), Gaps = 37/158 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD + RIVP GT GEL RG+ MLGYW DE+KT+E+I W+ TG
Sbjct: 390 LEVKIVDLDGRIVPRGTAGELCTRGYSVMLGYWNDEEKTRESIDSAGWMHTG-------- 441
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L E GY ++VGRIKDM+IRGGENIYP+
Sbjct: 442 -----------------------------DLATLDEHGYCKIVGRIKDMVIRGGENIYPR 472
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
EIEEF+ HP V + GVPD++ GEE+ I+L+E
Sbjct: 473 EIEEFLYRHPAVNDVQVIGVPDKKYGEELCACIRLREG 510
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Query: 388 DSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYG 447
DSAG + D L E GY ++VGRIKDM+IRGGENIYP+EIEEF+ HP V + G
Sbjct: 433 DSAGW-MHTGDLATLDEHGYCKIVGRIKDMVIRGGENIYPREIEEFLYRHPAVNDVQVIG 491
Query: 448 VPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
VPD++ GEE+ I+L+E + ++IR FCKG+++ +
Sbjct: 492 VPDKKYGEELCACIRLREGHEATEEEIREFCKGQIAHY 529
>gi|392983887|ref|YP_006482474.1| AMP-binding protein [Pseudomonas aeruginosa DK2]
gi|419753428|ref|ZP_14279832.1| AMP-binding domain protein [Pseudomonas aeruginosa PADK2_CF510]
gi|384400550|gb|EIE46909.1| AMP-binding domain protein [Pseudomonas aeruginosa PADK2_CF510]
gi|392319392|gb|AFM64772.1| AMP-binding domain protein [Pseudomonas aeruginosa DK2]
Length = 564
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD R+VP G GEL RG+ MLGYW D Q T E I P R
Sbjct: 369 ELRVTTVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDSQATAEAIDPAR 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D V+ +DGY ++VGR K
Sbjct: 429 WMHTG-------------------------------------DLAVMDDDGYVRIVGRSK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+PDER GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKL 499
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D V+ +DGY ++VGR KDMIIRGGENIYP+E+EEF THP V + G+PD
Sbjct: 427 ARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPD 486
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
ER GEE+ IKL + + +R FCK +++ F
Sbjct: 487 ERYGEEIVAWIKLHPGHHADDEQLRAFCKARIAHF 521
>gi|118099923|ref|XP_420105.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Gallus gallus]
Length = 593
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 85/170 (50%), Gaps = 38/170 (22%)
Query: 20 QAKVVDHNNR-IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+ D R VP TPGEL +RG+C MLGYW D +T+E I D W +TG
Sbjct: 419 EAKIEDPETRKPVPLNTPGELQVRGYCVMLGYWNDSARTREVISDDNWYKTG-------- 470
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L E GY +++GR KDMIIRGGENIYP
Sbjct: 471 -----------------------------DIATLDEHGYCRIIGRCKDMIIRGGENIYPA 501
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
EIE+F+ THP V E GV D RMGEEV I+L+ A + K+
Sbjct: 502 EIEQFLHTHPKVEEVQVVGVKDSRMGEEVCACIRLRAGQSCAADDIKAFC 551
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E GY +++GR KDMIIRGGENIYP EIE+F+ THP V E GV D RMGEEV
Sbjct: 471 DIATLDEHGYCRIIGRCKDMIIRGGENIYPAEIEQFLHTHPKVEEVQVVGVKDSRMGEEV 530
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+L+ ADDI+ FCKGK+S F
Sbjct: 531 CACIRLRAGQSCAADDIKAFCKGKISHF 558
>gi|421180309|ref|ZP_15637876.1| AMP-binding domain protein [Pseudomonas aeruginosa E2]
gi|404545989|gb|EKA55058.1| AMP-binding domain protein [Pseudomonas aeruginosa E2]
Length = 564
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD R+VP G GEL RG+ MLGYW D Q T E I P R
Sbjct: 369 ELRVTTVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPAR 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D V+ +DGY ++VGR K
Sbjct: 429 WMHTG-------------------------------------DLAVMDDDGYVRIVGRSK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+PDER GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKL 499
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D V+ +DGY ++VGR KDMIIRGGENIYP+E+EEF THP V + G+PD
Sbjct: 427 ARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPD 486
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
ER GEE+ IKL + + +R FCK +++ F
Sbjct: 487 ERYGEEIVAWIKLHPGHHADDEQLRAFCKARIAHF 521
>gi|355642303|ref|ZP_09052704.1| hypothetical protein HMPREF1030_01790 [Pseudomonas sp. 2_1_26]
gi|354830374|gb|EHF14420.1| hypothetical protein HMPREF1030_01790 [Pseudomonas sp. 2_1_26]
Length = 564
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD R+VP G GEL RG+ MLGYW D Q T E I P R
Sbjct: 369 ELRVTTVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPAR 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D V+ +DGY ++VGR K
Sbjct: 429 WMHTG-------------------------------------DLAVMDDDGYVRIVGRSK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+PDER GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKL 499
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D V+ +DGY ++VGR KDMIIRGGENIYP+E+EEF THP V + G+PD
Sbjct: 427 ARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPD 486
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
ER GEE+ IKL + + +R FCK +++ F
Sbjct: 487 ERYGEEIVAWIKLHPGHHADDEQLRAFCKARIAHF 521
>gi|421167427|ref|ZP_15625616.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 700888]
gi|404534460|gb|EKA44194.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 700888]
Length = 564
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD R+VP G GEL RG+ MLGYW D Q T E I P R
Sbjct: 369 ELRVTTVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPAR 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D V+ +DGY ++VGR K
Sbjct: 429 WMHTG-------------------------------------DLAVMDDDGYVRIVGRSK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+PDER GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKL 499
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D V+ +DGY ++VGR KDMIIRGGENIYP+E+EEF THP V + G+PD
Sbjct: 427 ARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPD 486
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
ER GEE+ IKL + + +R FCK +++ F
Sbjct: 487 ERYGEEIVAWIKLHPGHHADDEQLRAFCKARIAHF 521
>gi|107102005|ref|ZP_01365923.1| hypothetical protein PaerPA_01003052 [Pseudomonas aeruginosa PACS2]
gi|116050501|ref|YP_790680.1| AMP-binding protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|421174299|ref|ZP_15632030.1| AMP-binding domain protein [Pseudomonas aeruginosa CI27]
gi|115585722|gb|ABJ11737.1| putative acyl-CoA synthetases (AMP-forming) [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404534503|gb|EKA44236.1| AMP-binding domain protein [Pseudomonas aeruginosa CI27]
Length = 564
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD R+VP G GEL RG+ MLGYW D Q T E I P R
Sbjct: 369 ELRVTTVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPAR 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D V+ +DGY ++VGR K
Sbjct: 429 WMHTG-------------------------------------DLAVMDDDGYVRIVGRSK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+PDER GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKL 499
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D V+ +DGY ++VGR KDMIIRGGENIYP+E+EEF THP V + G+PD
Sbjct: 427 ARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPD 486
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
ER GEE+ IKL + + +R FCK +++ F
Sbjct: 487 ERYGEEIVAWIKLHPGHHADDEQLRAFCKARIAHF 521
>gi|313107462|ref|ZP_07793649.1| putative AMP-binding enzyme [Pseudomonas aeruginosa 39016]
gi|386066494|ref|YP_005981798.1| acyl-CoA synthetase [Pseudomonas aeruginosa NCGM2.S1]
gi|310880151|gb|EFQ38745.1| putative AMP-binding enzyme [Pseudomonas aeruginosa 39016]
gi|348035053|dbj|BAK90413.1| acyl-CoA synthetase [Pseudomonas aeruginosa NCGM2.S1]
Length = 564
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD R+VP G GEL RG+ MLGYW D Q T E I P R
Sbjct: 369 ELRVTTVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPAR 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D V+ +DGY ++VGR K
Sbjct: 429 WMHTG-------------------------------------DLAVMDDDGYVRIVGRSK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+PDER GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKL 499
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D V+ +DGY ++VGR KDMIIRGGENIYP+E+EEF THP V + G+PD
Sbjct: 427 ARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPD 486
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
ER GEE+ IKL + + +R FCK +++ F
Sbjct: 487 ERYGEEIVAWIKLHPGHHADDEQLRAFCKARIAHF 521
>gi|416872613|ref|ZP_11916817.1| AMP-binding domain protein [Pseudomonas aeruginosa 152504]
gi|416872754|ref|ZP_11916934.1| AMP-binding domain protein [Pseudomonas aeruginosa 152504]
gi|334845741|gb|EGM24301.1| AMP-binding domain protein [Pseudomonas aeruginosa 152504]
gi|334845851|gb|EGM24410.1| AMP-binding domain protein [Pseudomonas aeruginosa 152504]
Length = 564
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD R+VP G GEL RG+ MLGYW D Q T E I P R
Sbjct: 369 ELRVTTVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPAR 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D V+ +DGY ++VGR K
Sbjct: 429 WMHTG-------------------------------------DLAVMDDDGYVRIVGRSK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+PDER GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKL 499
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 63/95 (66%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D V+ +DGY ++VGR KDMIIRGGENIYP+E+EEF THP V + G+PD
Sbjct: 427 ARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPD 486
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
ER GEE+ IKL + + +RTFCK +++ F
Sbjct: 487 ERYGEEIVAWIKLHPGHHADDEQLRTFCKARIAHF 521
>gi|416858764|ref|ZP_11913524.1| AMP-binding domain protein [Pseudomonas aeruginosa 138244]
gi|334839139|gb|EGM17834.1| AMP-binding domain protein [Pseudomonas aeruginosa 138244]
gi|453044975|gb|EME92696.1| AMP-binding domain protein [Pseudomonas aeruginosa PA21_ST175]
Length = 564
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD R+VP G GEL RG+ MLGYW D Q T E I P R
Sbjct: 369 ELRVTTVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPAR 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D V+ +DGY ++VGR K
Sbjct: 429 WMHTG-------------------------------------DLAVMDDDGYVRIVGRSK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+PDER GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKL 499
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D V+ +DGY ++VGR KDMIIRGGENIYP+E+EEF THP V + G+PD
Sbjct: 427 ARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPD 486
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
ER GEE+ IKL + + +R FCK +++ F
Sbjct: 487 ERYGEEIVAWIKLHPGHHADDEQLRAFCKARIAHF 521
>gi|15597753|ref|NP_251247.1| AMP-binding protein [Pseudomonas aeruginosa PAO1]
gi|218891464|ref|YP_002440331.1| AMP-binding protein [Pseudomonas aeruginosa LESB58]
gi|418585097|ref|ZP_13149152.1| AMP-binding domain protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418590678|ref|ZP_13154586.1| AMP-binding domain protein [Pseudomonas aeruginosa MPAO1/P2]
gi|420139736|ref|ZP_14647555.1| AMP-binding domain protein [Pseudomonas aeruginosa CIG1]
gi|421160319|ref|ZP_15619389.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 25324]
gi|421517066|ref|ZP_15963740.1| AMP-binding domain protein [Pseudomonas aeruginosa PAO579]
gi|9948616|gb|AAG05945.1|AE004683_9 probable AMP-binding enzyme [Pseudomonas aeruginosa PAO1]
gi|218771690|emb|CAW27464.1| probable AMP-binding enzyme [Pseudomonas aeruginosa LESB58]
gi|375044826|gb|EHS37418.1| AMP-binding domain protein [Pseudomonas aeruginosa MPAO1/P1]
gi|375050635|gb|EHS43115.1| AMP-binding domain protein [Pseudomonas aeruginosa MPAO1/P2]
gi|403247484|gb|EJY61121.1| AMP-binding domain protein [Pseudomonas aeruginosa CIG1]
gi|404346548|gb|EJZ72897.1| AMP-binding domain protein [Pseudomonas aeruginosa PAO579]
gi|404544803|gb|EKA53935.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 25324]
Length = 564
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD R+VP G GEL RG+ MLGYW D Q T E I P R
Sbjct: 369 ELRVTTVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPAR 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D V+ +DGY ++VGR K
Sbjct: 429 WMHTG-------------------------------------DLAVMDDDGYVRIVGRSK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+PDER GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKL 499
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D V+ +DGY ++VGR KDMIIRGGENIYP+E+EEF THP V + G+PD
Sbjct: 427 ARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPD 486
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
ER GEE+ IKL + + +R FCK +++ F
Sbjct: 487 ERYGEEIVAWIKLHPGHHADDEQLRAFCKARIAHF 521
>gi|254235546|ref|ZP_04928869.1| hypothetical protein PACG_01473 [Pseudomonas aeruginosa C3719]
gi|126167477|gb|EAZ52988.1| hypothetical protein PACG_01473 [Pseudomonas aeruginosa C3719]
Length = 564
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD R+VP G GEL RG+ MLGYW D Q T E I P R
Sbjct: 369 ELRVTTVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPAR 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D V+ +DGY ++VGR K
Sbjct: 429 WMHTG-------------------------------------DLAVMDDDGYVRIVGRSK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+PDER GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKL 499
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D V+ +DGY ++VGR KDMIIRGGENIYP+E+EEF THP V + G+PD
Sbjct: 427 ARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPD 486
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
ER GEE+ IKL + + +R FCK +++ F
Sbjct: 487 ERYGEEIVAWIKLHPGHHADDEQLRAFCKARIAHF 521
>gi|296389017|ref|ZP_06878492.1| AMP-binding domain protein [Pseudomonas aeruginosa PAb1]
Length = 513
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD R+VP G GEL RG+ MLGYW D Q T E I P R
Sbjct: 369 ELRVTTVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPAR 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D V+ +DGY ++VGR K
Sbjct: 429 WMHTG-------------------------------------DLAVMDDDGYVRIVGRSK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+PDER GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKL 499
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 57/86 (66%)
Query: 392 RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDE 451
R + D V+ +DGY ++VGR KDMIIRGGENIYP+E+EEF THP V + G+PDE
Sbjct: 428 RWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDE 487
Query: 452 RMGEEVGISIKLKENAKLNADDIRTF 477
R GEE+ IKL + + +RTF
Sbjct: 488 RYGEEIVAWIKLHPGHHADDEQLRTF 513
>gi|254240989|ref|ZP_04934311.1| hypothetical protein PA2G_01670 [Pseudomonas aeruginosa 2192]
gi|451984300|ref|ZP_21932557.1| Acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Pseudomonas aeruginosa 18A]
gi|126194367|gb|EAZ58430.1| hypothetical protein PA2G_01670 [Pseudomonas aeruginosa 2192]
gi|451758229|emb|CCQ85080.1| Acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Pseudomonas aeruginosa 18A]
Length = 564
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD R+VP G GEL RG+ MLGYW D Q T E I P R
Sbjct: 369 ELRVTTVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPAR 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D V+ +DGY ++VGR K
Sbjct: 429 WMHTG-------------------------------------DLAVMDDDGYVRIVGRSK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+PDER GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKL 499
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D V+ +DGY ++VGR KDMIIRGGENIYP+E+EEF THP V + G+PD
Sbjct: 427 ARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPD 486
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
ER GEE+ IKL + + +R FCK +++ F
Sbjct: 487 ERYGEEIVAWIKLHPGHHADDEQLRAFCKARIAHF 521
>gi|389862540|ref|YP_006364780.1| short-chain acyl-CoA synthetase [Modestobacter marinus]
gi|388484743|emb|CCH86283.1| short-chain acyl-CoA synthetase [Modestobacter marinus]
Length = 551
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
++KVVD + VP GTPGEL RG+ MLGYW++ +KT E + RW+ TG
Sbjct: 366 LESKVVDPETGLTVPRGTPGELCTRGYSVMLGYWDEPEKTAEVLDAARWMHTG------- 418
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ E GY +VGRIKDM+IRGGEN+YP
Sbjct: 419 ------------------------------DLAVMDEAGYLNIVGRIKDMVIRGGENVYP 448
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+E+EEF+ THP++++A GVPDER GEE+ ++L+E A+
Sbjct: 449 REVEEFLYTHPDIVDAQVIGVPDERYGEELMAWVQLREGAE 489
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 83/135 (61%), Gaps = 6/135 (4%)
Query: 356 KVALTWPNSMDSEARIYHYKKYL----REEENITVPDSAGRSIFEKDQFVLREDGYGQVV 411
+ LT P E Y L E+ V D+A R + D V+ E GY +V
Sbjct: 374 ETGLTVPRGTPGELCTRGYSVMLGYWDEPEKTAEVLDAA-RWMHTGDLAVMDEAGYLNIV 432
Query: 412 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LN 470
GRIKDM+IRGGEN+YP+E+EEF+ THP++++A GVPDER GEE+ ++L+E A+ L
Sbjct: 433 GRIKDMVIRGGENVYPREVEEFLYTHPDIVDAQVIGVPDERYGEELMAWVQLREGAEPLT 492
Query: 471 ADDIRTFCKGKVSKF 485
A+ +R FC GK++ F
Sbjct: 493 AEALRAFCAGKLAHF 507
>gi|326931026|ref|XP_003211637.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Meleagris gallopavo]
Length = 604
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 85/170 (50%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+ D + VP TPGEL +RG+C MLGYW D +T+E I D W +TG
Sbjct: 430 EAKIEDPETGKPVPLNTPGELQVRGYCVMLGYWNDSARTREVISDDNWYKTG-------- 481
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L EDGY +++GR KDMIIRGGENIYP
Sbjct: 482 -----------------------------DIATLDEDGYCRIIGRCKDMIIRGGENIYPA 512
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
EIE+F+ THP V E GV D MGEEV I+L+ A + K+
Sbjct: 513 EIEQFLHTHPKVEEVQVVGVKDSLMGEEVCACIRLRAGQSCAADDIKAFC 562
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L EDGY +++GR KDMIIRGGENIYP EIE+F+ THP V E GV D MGEEV
Sbjct: 482 DIATLDEDGYCRIIGRCKDMIIRGGENIYPAEIEQFLHTHPKVEEVQVVGVKDSLMGEEV 541
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+L+ ADDI+ FCKGK+S F
Sbjct: 542 CACIRLRAGQSCAADDIKAFCKGKISHF 569
>gi|424941819|ref|ZP_18357582.1| probable AMP-binding enzyme [Pseudomonas aeruginosa NCMG1179]
gi|346058265|dbj|GAA18148.1| probable AMP-binding enzyme [Pseudomonas aeruginosa NCMG1179]
Length = 564
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 89/168 (52%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD R+VP G GEL RG+ MLGYW D Q T E + P R
Sbjct: 369 ELRVTTVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAVDPAR 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D V+ +DGY ++VGR K
Sbjct: 429 WMHTG-------------------------------------DLAVMDDDGYVRIVGRSK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+PDER GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKL 499
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D V+ +DGY ++VGR KDMIIRGGENIYP+E+EEF THP V + G+PD
Sbjct: 427 ARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPD 486
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
ER GEE+ IKL + + +R FCK +++ F
Sbjct: 487 ERYGEEIVAWIKLHPGHHADDEQLRAFCKARIAHF 521
>gi|291228110|ref|XP_002734031.1| PREDICTED: fatty Acid CoA Synthetase family member (acs-2)-like
[Saccoglossus kowalevskii]
Length = 490
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 40/173 (23%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +++ ST+ S +AK++D + + TPGEL RG MLGYWEDE+KTK +
Sbjct: 295 DPIEVRVSTIGKPISHTEAKIIDPESGHVNAVETPGELCTRGFTTMLGYWEDEEKTKAAV 354
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
G DRW TG D V+ + GY ++V
Sbjct: 355 GSDRWFHTG-------------------------------------DIAVIDDTGYCRIV 377
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
RIKDMIIRGGENIYP EIE+F+ HP + + GVPDER+GEE+ IKLK
Sbjct: 378 SRIKDMIIRGGENIYPVEIEQFLYKHPKIEDVQVIGVPDERLGEEICAWIKLK 430
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 66/109 (60%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y +EE + R D V+ + GY ++V RIKDMIIRGGENIYP EIE+F+
Sbjct: 343 YWEDEEKTKAAVGSDRWFHTGDIAVIDDTGYCRIVSRIKDMIIRGGENIYPVEIEQFLYK 402
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
HP + + GVPDER+GEE+ IKLK +I+ FC+G++S F
Sbjct: 403 HPKIEDVQVIGVPDERLGEEICAWIKLKAAQTAKEQEIKDFCQGQISHF 451
>gi|407982490|ref|ZP_11163166.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
gi|407376002|gb|EKF24942.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
Length = 562
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 85/157 (54%), Gaps = 38/157 (24%)
Query: 19 FQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + +P G GE RG+ M GYW D ++T+E I PD WL TG
Sbjct: 386 VEIKIVDPVTGKTLPRGATGEFCTRGYSVMTGYWNDAERTREAIDPDGWLHTG------- 438
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY Q+VGRIKDM+IRGGEN+YP
Sbjct: 439 ------------------------------DLAVMREDGYCQIVGRIKDMVIRGGENVYP 468
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
+EIEEF+ THP++ + GVPDER GEE+ IK++
Sbjct: 469 REIEEFLHTHPDIEDVQVVGVPDERYGEEICAWIKMR 505
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+REDGY Q+VGRIKDM+IRGGEN+YP+EIEEF+ THP++ + GVPDER GEE+
Sbjct: 439 DLAVMREDGYCQIVGRIKDMVIRGGENVYPREIEEFLHTHPDIEDVQVVGVPDERYGEEI 498
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSKF 485
IK++ L+A +R + + K++ F
Sbjct: 499 CAWIKMRPGRPPLDAAAVRAYARDKLAHF 527
>gi|149724572|ref|XP_001502813.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Equus caballus]
Length = 615
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 88/170 (51%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ + TPGEL IRG+C MLGYW D QKT E +G D+W RTG
Sbjct: 441 EAQIVNTETGTLTKLNTPGELWIRGYCVMLGYWGDPQKTVEAVGQDKWYRTG-------- 492
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E G+ ++VGR KDMIIRGGENIYP
Sbjct: 493 -----------------------------DIATMDEKGFCKIVGRSKDMIIRGGENIYPA 523
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F THP V E GV D+R+GEE+ I+LK+ K A E K+
Sbjct: 524 ELEDFFHTHPKVQEVQVVGVKDKRLGEEICACIRLKKGEKTTAEEIKAFC 573
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+R+GEE+
Sbjct: 493 DIATMDEKGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDKRLGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ K A++I+ FCKGK++ F
Sbjct: 553 CACIRLKKGEKTTAEEIKAFCKGKIAHF 580
>gi|379710061|ref|YP_005265266.1| acyl-CoA synthetase [Nocardia cyriacigeorgica GUH-2]
gi|374847560|emb|CCF64630.1| acyl-CoA synthetase [Nocardia cyriacigeorgica GUH-2]
Length = 541
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 85/161 (52%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD R VP G PGEL RG+ MLGYW D +T E I RW+ TG
Sbjct: 363 LEIKIVDPVTGRTVPRGEPGELCTRGYSVMLGYWNDPDRTAEAIDAARWMHTG------- 415
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ EDGY V GRIKDM+IRGGENIYP
Sbjct: 416 ------------------------------DIGVMDEDGYVAVTGRIKDMVIRGGENIYP 445
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPD + GEE+ ++L+E A
Sbjct: 446 REIEEFLYTHPDILDAQVIGVPDPKYGEELMAWVRLREGAA 486
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ EDGY V GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVP
Sbjct: 408 AARWMHTGDIGVMDEDGYVAVTGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVP 467
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
D + GEE+ ++L+E A L+AD +R FC GK++ F
Sbjct: 468 DPKYGEELMAWVRLREGAAPLDADALRVFCAGKLAHF 504
>gi|152988530|ref|YP_001348039.1| AMP-binding protein [Pseudomonas aeruginosa PA7]
gi|150963688|gb|ABR85713.1| acyl-CoA synthase [Pseudomonas aeruginosa PA7]
Length = 561
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 98/188 (52%), Gaps = 44/188 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD R+VP G GEL RG+ MLGYW D Q T E I P R
Sbjct: 369 ELRVTTVGRTQPRLESKIVDQQGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPAR 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D ++ +DGY ++VGR K
Sbjct: 429 WMHTG-------------------------------------DLALMDDDGYVRIVGRSK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL-----KENAKLN 180
DMIIRGGENIYP+E+EEF THP V + G+PDER GEE+ IKL ++ +L
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKLHPGHRADDEQLR 511
Query: 181 AYEDKSIS 188
A+ + I+
Sbjct: 512 AFCKERIA 519
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 63/95 (66%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D ++ +DGY ++VGR KDMIIRGGENIYP+E+EEF THP V + G+PD
Sbjct: 427 ARWMHTGDLALMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPD 486
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
ER GEE+ IKL + + + +R FCK +++ F
Sbjct: 487 ERYGEEIVAWIKLHPGHRADDEQLRAFCKERIAHF 521
>gi|421154052|ref|ZP_15613578.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 14886]
gi|404522671|gb|EKA33148.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 14886]
Length = 564
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 89/168 (52%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD R+VP G GEL RG+ MLGYW D Q T E I P R
Sbjct: 369 ELRVTTVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPAR 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D V+ +DGY ++VGR K
Sbjct: 429 WMHTG-------------------------------------DLAVMDDDGYVRIVGRSK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+PDER GE++ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEDIVAWIKL 499
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 62/95 (65%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D V+ +DGY ++VGR KDMIIRGGENIYP+E+EEF THP V + G+PD
Sbjct: 427 ARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPD 486
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
ER GE++ IKL + + +R FCK +++ F
Sbjct: 487 ERYGEDIVAWIKLHPGHHADDEQLRAFCKARIAHF 521
>gi|284989388|ref|YP_003407942.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
gi|284062633|gb|ADB73571.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
Length = 551
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 89/161 (55%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KV+D + VP GTPGE RG+ MLGYW++ +KT E I RW+ TG
Sbjct: 366 LEVKVIDPETGLTVPRGTPGEFCTRGYSVMLGYWDEPEKTAEVIDAARWMHTG------- 418
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ +GY +VGRIKDM+IRGGEN+YP
Sbjct: 419 ------------------------------DLAVMDAEGYLNIVGRIKDMVIRGGENVYP 448
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+E+EEF+ THP+V++A GVPDER GEE+ ++L+E A+
Sbjct: 449 REVEEFLYTHPDVVDAQVIGVPDERFGEELMAWVRLREGAE 489
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 82/135 (60%), Gaps = 6/135 (4%)
Query: 356 KVALTWPNSMDSEARIYHYKKYL----REEENITVPDSAGRSIFEKDQFVLREDGYGQVV 411
+ LT P E Y L E+ V D+A R + D V+ +GY +V
Sbjct: 374 ETGLTVPRGTPGEFCTRGYSVMLGYWDEPEKTAEVIDAA-RWMHTGDLAVMDAEGYLNIV 432
Query: 412 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LN 470
GRIKDM+IRGGEN+YP+E+EEF+ THP+V++A GVPDER GEE+ ++L+E A+ L
Sbjct: 433 GRIKDMVIRGGENVYPREVEEFLYTHPDVVDAQVIGVPDERFGEELMAWVRLREGAEPLT 492
Query: 471 ADDIRTFCKGKVSKF 485
+ +R FC G+++ +
Sbjct: 493 PEALRQFCSGRLAHY 507
>gi|302530557|ref|ZP_07282899.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. AA4]
gi|302439452|gb|EFL11268.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. AA4]
Length = 546
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 90/161 (55%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
++KVVD + VP GTPGEL RG+ MLGYWE+ +KT E I RW+ TG
Sbjct: 361 LESKVVDPETGLTVPRGTPGELCTRGYSVMLGYWEEPEKTAEAIDAARWMHTG------- 413
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D ++ ++GY + GRIKDM+IRGGENIYP
Sbjct: 414 ------------------------------DLAIMDDEGYLNITGRIKDMVIRGGENIYP 443
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP+VL+A GVPD + GEE+ I+++E A+
Sbjct: 444 REIEEFLYTHPDVLDAQVIGVPDVKYGEELMAWIRMREGAE 484
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 79/134 (58%), Gaps = 4/134 (2%)
Query: 356 KVALTWPNSMDSEARIYHYK---KYLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVG 412
+ LT P E Y Y E E A R + D ++ ++GY + G
Sbjct: 369 ETGLTVPRGTPGELCTRGYSVMLGYWEEPEKTAEAIDAARWMHTGDLAIMDDEGYLNITG 428
Query: 413 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LNA 471
RIKDM+IRGGENIYP+EIEEF+ THP+VL+A GVPD + GEE+ I+++E A+ L
Sbjct: 429 RIKDMVIRGGENIYPREIEEFLYTHPDVLDAQVIGVPDVKYGEELMAWIRMREGAEPLTV 488
Query: 472 DDIRTFCKGKVSKF 485
+ +R FC+GK++ +
Sbjct: 489 ESVREFCQGKLAHY 502
>gi|452879218|ref|ZP_21956348.1| AMP-binding domain protein, partial [Pseudomonas aeruginosa
VRFPA01]
gi|452184192|gb|EME11210.1| AMP-binding domain protein, partial [Pseudomonas aeruginosa
VRFPA01]
Length = 373
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 98/188 (52%), Gaps = 44/188 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD R+VP G GEL RG+ MLGYW D Q T E I P R
Sbjct: 181 ELRVTTVGRTQPRLESKIVDQQGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPAR 240
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D ++ +DGY ++VGR K
Sbjct: 241 WMHTG-------------------------------------DLALMDDDGYVRIVGRSK 263
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL-----KENAKLN 180
DMIIRGGENIYP+E+EEF THP V + G+PDER GEE+ IKL ++ +L
Sbjct: 264 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKLHPGHRADDEQLR 323
Query: 181 AYEDKSIS 188
A+ + I+
Sbjct: 324 AFCKERIA 331
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ +DGY ++VGR KDMIIRGGENIYP+E+EEF THP V + G+PDER GEE+
Sbjct: 246 DLALMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 305
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKL + + + +R FCK +++ F
Sbjct: 306 VAWIKLHPGHRADDEQLRAFCKERIAHF 333
>gi|374620358|ref|ZP_09692892.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [gamma
proteobacterium HIMB55]
gi|374303585|gb|EHQ57769.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [gamma
proteobacterium HIMB55]
Length = 560
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 87/172 (50%), Gaps = 37/172 (21%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K++D +VP G GE+ RG+ M GYW D +KT ETI WL +G
Sbjct: 384 VEIKIIDEAGHVVPVGQKGEICTRGYSVMQGYWNDPEKTAETIDASGWLHSG-------- 435
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + GY ++VGRIKDMIIRGGENIYP+
Sbjct: 436 -----------------------------DIATMDASGYVRIVGRIKDMIIRGGENIYPR 466
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
E+EEF+ HP + E +G+PDE+MGEEV I+L E A L A + K+ D
Sbjct: 467 EVEEFLYQHPAITEVQVFGIPDEKMGEEVCAWIQLNEGADLTADDVKAYCKD 518
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 64/88 (72%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + GY ++VGRIKDMIIRGGENIYP+E+EEF+ HP + E +G+PDE+MGEEV
Sbjct: 436 DIATMDASGYVRIVGRIKDMIIRGGENIYPREVEEFLYQHPAITEVQVFGIPDEKMGEEV 495
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+L E A L ADD++ +CK +++ F
Sbjct: 496 CAWIQLNEGADLTADDVKAYCKDQITHF 523
>gi|375102706|ref|ZP_09748969.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora cyanea NA-134]
gi|374663438|gb|EHR63316.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora cyanea NA-134]
Length = 548
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 87/161 (54%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP GTPGEL RG+ MLGYWE +KT E I RW+ TG
Sbjct: 367 LEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWEQPEKTAEVIDAARWMHTG------- 419
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ DGY + GRIKDM+IRGGENIYP
Sbjct: 420 ------------------------------DLAVMDADGYVTITGRIKDMVIRGGENIYP 449
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPD R GEE+ +++++ A+
Sbjct: 450 REIEEFLYTHPDILDAQVIGVPDARYGEELMAWVRMRDGAE 490
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
Query: 358 ALTWPNSMDSEARIYHYKKYL----REEENITVPDSAGRSIFEKDQFVLREDGYGQVVGR 413
LT P E Y L + E+ V D+A R + D V+ DGY + GR
Sbjct: 377 GLTVPRGTPGELCTRGYSVMLGYWEQPEKTAEVIDAA-RWMHTGDLAVMDADGYVTITGR 435
Query: 414 IKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LNAD 472
IKDM+IRGGENIYP+EIEEF+ THP++L+A GVPD R GEE+ +++++ A+ + A+
Sbjct: 436 IKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDARYGEELMAWVRMRDGAEPVTAE 495
Query: 473 DIRTFCKGKVSKF 485
+R FC G+++ +
Sbjct: 496 SLREFCTGRLAHY 508
>gi|373856103|ref|ZP_09598848.1| AMP-dependent synthetase and ligase [Bacillus sp. 1NLA3E]
gi|372453940|gb|EHP27406.1| AMP-dependent synthetase and ligase [Bacillus sp. 1NLA3E]
Length = 547
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 98/182 (53%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P DL+ +++ + + + K+VD N+ VPFG PGEL RG+ M GY+++ T + I
Sbjct: 354 DPFDLRVNSVGRAMPNVEVKIVDPTTNKEVPFGVPGELCTRGYHVMKGYYKNPAATADAI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ WL TG D V+ E+GY Q+
Sbjct: 414 DEENWLHTG-------------------------------------DIAVMDENGYCQIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ THP VL+ G+PDE+ GEEV I+LKE+ +
Sbjct: 437 GRLKDMIIRGGENIYPREIEEFLYTHPKVLDVQVVGIPDEKYGEEVTAWIRLKEDTTATS 496
Query: 182 YE 183
E
Sbjct: 497 EE 498
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 68/88 (77%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY Q+ GR+KDMIIRGGENIYP+EIEEF+ THP VL+ G+PDE+ GEEV
Sbjct: 423 DIAVMDENGYCQITGRLKDMIIRGGENIYPREIEEFLYTHPKVLDVQVVGIPDEKYGEEV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LKE+ +++IR +CKGK+S+F
Sbjct: 483 TAWIRLKEDTTATSEEIRDYCKGKISRF 510
>gi|120404962|ref|YP_954791.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii PYR-1]
gi|119957780|gb|ABM14785.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii PYR-1]
Length = 1043
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 93/173 (53%), Gaps = 39/173 (22%)
Query: 19 FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + IV GT GE RG+ MLGYW DE +T+E + D W+ TG
Sbjct: 867 VEIKIVDPDTGEIVKRGTAGEFCTRGYSVMLGYWGDEDRTREAVDADGWMHTG------- 919
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R+DGY +VGRIKDM+IRGGEN+YP
Sbjct: 920 ------------------------------DLAVMRDDGYCMIVGRIKDMVIRGGENVYP 949
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LNAYEDKSISS 189
+EIEEF+ THP++ + GVPDER GEE+ IK++ A L+A+ + ++
Sbjct: 950 REIEEFLHTHPDIDDVQVIGVPDERYGEEICAWIKVRAGAAPLDAHAVREFAA 1002
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+R+DGY +VGRIKDM+IRGGEN+YP+EIEEF+ THP++ + GVPDER GEE+
Sbjct: 920 DLAVMRDDGYCMIVGRIKDMVIRGGENVYPREIEEFLHTHPDIDDVQVIGVPDERYGEEI 979
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSKF 485
IK++ A L+A +R F GK++ +
Sbjct: 980 CAWIKVRAGAAPLDAHAVREFAAGKLAHY 1008
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY VV R KDMII GGENIY E+E + THP V E GVP + GE I +
Sbjct: 394 DGYFYVVDRKKDMIISGGENIYSAEVENVVATHPLVAEVAVIGVPHPKWGETPVAVIVPR 453
Query: 465 ENAKLNAD-DIRTFCKGKVSKF 485
E D +I C+ +++ +
Sbjct: 454 EPTDPPTDAEIEAHCRAQLASY 475
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 89 KPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHP 148
K + + + G+F+S D DGY VV R KDMII GGENIY E+E + THP
Sbjct: 370 KAAETAEAFRGGWFHS--GDLVRQDADGYFYVVDRKKDMIISGGENIYSAEVENVVATHP 427
Query: 149 NVLEAYAYGVPDERMGE 165
V E GVP + GE
Sbjct: 428 LVAEVAVIGVPHPKWGE 444
>gi|389784070|ref|ZP_10195267.1| acyl-CoA synthetase [Rhodanobacter spathiphylli B39]
gi|388433827|gb|EIL90786.1| acyl-CoA synthetase [Rhodanobacter spathiphylli B39]
Length = 558
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 85/165 (51%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD ++VP GTPGEL RG+ MLGYW+D +T E I RW+ TG
Sbjct: 384 LEVKLVDEAGQVVPRGTPGELCTRGYSVMLGYWDDPARTAEVIDEARWMHTG-------- 435
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ DGY +VGR+KDMIIRGGEN+YP+
Sbjct: 436 -----------------------------DLAVIDADGYCSIVGRLKDMIIRGGENVYPR 466
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
EIEEF+ HP V + +GVPD + GE+V I L++ + E
Sbjct: 467 EIEEFLYGHPKVRDVQVFGVPDPKFGEQVCAWIVLRDGVSASVAE 511
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D V+ DGY +VGR+KDMIIRGGEN+YP+EIEEF+ HP V + +GVPD
Sbjct: 429 ARWMHTGDLAVIDADGYCSIVGRLKDMIIRGGENVYPREIEEFLYGHPKVRDVQVFGVPD 488
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCK 479
+ GE+V I L++ + +I+ C+
Sbjct: 489 PKFGEQVCAWIVLRDGVSASVAEIQDHCR 517
>gi|291228112|ref|XP_002734032.1| PREDICTED: fatty Acid CoA Synthetase family member (acs-2)-like
[Saccoglossus kowalevskii]
Length = 621
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 94/184 (51%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ ST+ S +AK++D + I TPGE+ RG MLGYW DE+KTK I
Sbjct: 429 DPIELRVSTIGKPVSHTEAKIIDPESGHIKAVETPGEMCTRGFSTMLGYWGDEEKTKSII 488
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
G DRWL G D V+ E GY ++V
Sbjct: 489 GSDRWLHNG-------------------------------------DIAVMDETGYCRIV 511
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+ DMIIRGGENIYP EIE+F+ HP + + GVPDER+GE V IKLK +
Sbjct: 512 GRMNDMIIRGGENIYPVEIEKFLYKHPKIEDVQVIGVPDERLGEVVCAWIKLKAAQTASE 571
Query: 182 YEDK 185
+E K
Sbjct: 572 HEIK 575
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 67/109 (61%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y +EE + R + D V+ E GY ++VGR+ DMIIRGGENIYP EIE+F+
Sbjct: 477 YWGDEEKTKSIIGSDRWLHNGDIAVMDETGYCRIVGRMNDMIIRGGENIYPVEIEKFLYK 536
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
HP + + GVPDER+GE V IKLK + +I+ FC+G+++ F
Sbjct: 537 HPKIEDVQVIGVPDERLGEVVCAWIKLKAAQTASEHEIKDFCQGQIAYF 585
>gi|449283065|gb|EMC89768.1| Acyl-CoA synthetase family member 2, mitochondrial, partial
[Columba livia]
Length = 558
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 84/170 (49%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+ D ++VP TPGEL IRG+C MLGYW D KT E I +RW +TG
Sbjct: 398 EAKIEDPETGKLVPPNTPGELQIRGYCVMLGYWNDPSKTSEVITAERWYKTG-------- 449
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L E GY ++VGR KDMIIRGGEN+YP
Sbjct: 450 -----------------------------DIASLDEHGYCRIVGRCKDMIIRGGENVYPA 480
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
EIE+F+ THP V E GV D RMGEE+ I++ E K+
Sbjct: 481 EIEQFLHTHPKVKEVQVVGVKDSRMGEEICACIRVCAGQDCTEEEIKAFC 530
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 57/84 (67%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
L E GY ++VGR KDMIIRGGEN+YP EIE+F+ THP V E GV D RMGEE+ I
Sbjct: 454 LDEHGYCRIVGRCKDMIIRGGENVYPAEIEQFLHTHPKVKEVQVVGVKDSRMGEEICACI 513
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
++ ++I+ FCKGK+S F
Sbjct: 514 RVCAGQDCTEEEIKAFCKGKISHF 537
>gi|381187508|ref|ZP_09895072.1| acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Flavobacterium frigoris PS1]
gi|379650636|gb|EIA09207.1| acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Flavobacterium frigoris PS1]
Length = 559
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 87/159 (54%), Gaps = 37/159 (23%)
Query: 27 NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRR 86
+++VP G GEL RG+C MLGYW D +TKE+I W+ +G
Sbjct: 391 THQVVPIGETGELCTRGYCVMLGYWNDPVRTKESIDSAGWMHSG---------------- 434
Query: 87 KLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 146
D ++ +GY +VGRIKDMIIRGGENIYPK IEEF+ T
Sbjct: 435 ---------------------DLAIMDNEGYINIVGRIKDMIIRGGENIYPKVIEEFLYT 473
Query: 147 HPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
H N+ E +G+PDE++GE+V + I++++N KL E K
Sbjct: 474 HENIKEVSVFGIPDEKLGEQVCVWIQMQDNYKLTELEVK 512
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 78/108 (72%), Gaps = 4/108 (3%)
Query: 378 LREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTH 437
+R +E+I DSAG + D ++ +GY +VGRIKDMIIRGGENIYPK IEEF+ TH
Sbjct: 419 VRTKESI---DSAGW-MHSGDLAIMDNEGYINIVGRIKDMIIRGGENIYPKVIEEFLYTH 474
Query: 438 PNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
N+ E +G+PDE++GE+V + I++++N KL +++ +C+GK++ +
Sbjct: 475 ENIKEVSVFGIPDEKLGEQVCVWIQMQDNYKLTELEVKEYCRGKIAHY 522
>gi|220920334|ref|YP_002495635.1| AMP-binding domain-containing protein [Methylobacterium nodulans
ORS 2060]
gi|219944940|gb|ACL55332.1| AMP-dependent synthetase and ligase [Methylobacterium nodulans ORS
2060]
Length = 564
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 83/162 (51%), Gaps = 37/162 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ KVVD RIVP GTPGEL RG+ M GYW D +KT E W+ TG
Sbjct: 385 EVKVVDAEGRIVPRGTPGELCTRGYSVMQGYWGDPEKTAEVRDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D L EDG+ +VGRIKD++IRGGEN+YP+E
Sbjct: 436 ----------------------------DLATLDEDGFCNIVGRIKDLVIRGGENVYPRE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
+EEF+ HP + E +GVPD R GEE+ ++L+ A L A
Sbjct: 468 VEEFLYRHPAIQEVQVFGVPDPRYGEELCAWVRLRPGAALTA 509
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Query: 381 EENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
E+ V D+AG + D L EDG+ +VGRIKD++IRGGEN+YP+E+EEF+ HP +
Sbjct: 420 EKTAEVRDAAG-WMHTGDLATLDEDGFCNIVGRIKDLVIRGGENVYPREVEEFLYRHPAI 478
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
E +GVPD R GEE+ ++L+ A L A+ +R C G+++
Sbjct: 479 QEVQVFGVPDPRYGEELCAWVRLRPGAALTAEGLRAHCAGQIA 521
>gi|419961133|ref|ZP_14477142.1| AMP-binding domain protein [Rhodococcus opacus M213]
gi|414573454|gb|EKT84138.1| AMP-binding domain protein [Rhodococcus opacus M213]
Length = 545
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 88/161 (54%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP GTPGEL RG+ MLGYW + +KT E I RW+ TG
Sbjct: 368 LEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAEAIDAGRWMHTG------- 420
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ DGY + GRIKDM+IRGGEN+YP
Sbjct: 421 ------------------------------DIGVMDSDGYVAITGRIKDMVIRGGENVYP 450
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPD + GEE+ + +++K+ A+
Sbjct: 451 REIEEFLYTHPDILDAQVIGVPDAKYGEELMVWVRMKDGAE 491
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
AGR + D V+ DGY + GRIKDM+IRGGEN+YP+EIEEF+ THP++L+A GVP
Sbjct: 413 AGRWMHTGDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVP 472
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
D + GEE+ + +++K+ A+ L+A +R FC GK++ +
Sbjct: 473 DAKYGEELMVWVRMKDGAEPLDAAKVREFCTGKLAHY 509
>gi|348170337|ref|ZP_08877231.1| AMP-binding domain protein [Saccharopolyspora spinosa NRRL 18395]
Length = 541
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 85/161 (52%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K++D + VP GTPGE RG+ MLGYW+ T E I RW+ TG
Sbjct: 361 LEVKIIDPATGLTVPRGTPGEFCTRGYSVMLGYWQQADTTAEAIDAARWMHTG------- 413
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ DGY + GRIKDM+IRGGENIYP
Sbjct: 414 ------------------------------DLAVMDADGYVSITGRIKDMVIRGGENIYP 443
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPD+R GEE+ I+++E AK
Sbjct: 444 REIEEFLYTHPDILDAQVIGVPDQRYGEELMAWIRMREGAK 484
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ DGY + GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVP
Sbjct: 406 AARWMHTGDLAVMDADGYVSITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVP 465
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
D+R GEE+ I+++E AK L + +R FC GK++ +
Sbjct: 466 DQRYGEELMAWIRMREGAKALTVEALREFCTGKLAHY 502
>gi|452949082|gb|EME54553.1| AMP-binding domain protein [Amycolatopsis decaplanina DSM 44594]
Length = 552
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 85/160 (53%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + VP G PGEL RG+ MLGYWE KT E I RW+ TG
Sbjct: 367 LEVKVVDPETGLTVPRGEPGELCTRGYSVMLGYWEQADKTAEAIDAARWMHTG------- 419
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D ++ DGY + GRIKDM+IRGGEN+YP
Sbjct: 420 ------------------------------DLAIMDADGYVNITGRIKDMVIRGGENLYP 449
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ THP++L+A GVPDE+ GEE+ I+++E A
Sbjct: 450 REIEEFLYTHPDILDAQVIGVPDEKYGEELMAWIRMREGA 489
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D ++ DGY + GRIKDM+IRGGEN+YP+EIEEF+ THP++L+A GVP
Sbjct: 412 AARWMHTGDLAIMDADGYVNITGRIKDMVIRGGENLYPREIEEFLYTHPDILDAQVIGVP 471
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
DE+ GEE+ I+++E A L A+ +R FC+GK++++
Sbjct: 472 DEKYGEELMAWIRMREGAAPLTAEAVREFCEGKLARY 508
>gi|384567576|ref|ZP_10014680.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora glauca K62]
gi|384523430|gb|EIF00626.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora glauca K62]
Length = 548
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 88/161 (54%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP GTPGEL RG+ MLGYWE +KT E I RW+ TG
Sbjct: 367 LEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWEQPEKTAEVIDAARWMHTG------- 419
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ +DGY + GRIKDM+IRGGENIYP
Sbjct: 420 ------------------------------DLAVMDDDGYVTITGRIKDMVIRGGENIYP 449
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPD + GEE+ +++++ A+
Sbjct: 450 REIEEFLYTHPDILDAQVIGVPDPKYGEELMAWVRMRDGAE 490
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 82/133 (61%), Gaps = 6/133 (4%)
Query: 358 ALTWPNSMDSEARIYHYKKYL----REEENITVPDSAGRSIFEKDQFVLREDGYGQVVGR 413
LT P E Y L + E+ V D+A R + D V+ +DGY + GR
Sbjct: 377 GLTVPRGTPGELCTRGYSVMLGYWEQPEKTAEVIDAA-RWMHTGDLAVMDDDGYVTITGR 435
Query: 414 IKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LNAD 472
IKDM+IRGGENIYP+EIEEF+ THP++L+A GVPD + GEE+ +++++ A+ L A+
Sbjct: 436 IKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDPKYGEELMAWVRMRDGAEPLTAE 495
Query: 473 DIRTFCKGKVSKF 485
+R FC GK++ +
Sbjct: 496 SLREFCTGKLAHY 508
>gi|295835793|ref|ZP_06822726.1| AMP-binding enzyme [Streptomyces sp. SPB74]
gi|295825696|gb|EFG64403.1| AMP-binding enzyme [Streptomyces sp. SPB74]
Length = 544
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 86/161 (53%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + + VP GT GEL RG+ MLGYWED ++T E + P RW+ TG
Sbjct: 369 LEVKVVDPVSGVTVPRGTQGELCTRGYSVMLGYWEDPERTAEAVDPGRWMHTG------- 421
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D ++REDGY ++ GRIKDMIIRGGENIYP
Sbjct: 422 ------------------------------DLALMREDGYVEIAGRIKDMIIRGGENIYP 451
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP + + GVPD R GE V + ++ A+
Sbjct: 452 REIEEFLHTHPKISDVQVVGVPDARYGESVLACVIPRDPAE 492
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
GR + D ++REDGY ++ GRIKDMIIRGGENIYP+EIEEF+ THP + + GVPD
Sbjct: 415 GRWMHTGDLALMREDGYVEIAGRIKDMIIRGGENIYPREIEEFLHTHPKISDVQVVGVPD 474
Query: 451 ERMGEEVGISIKLKENAKL-NADDIRTFCKGKVSKF 485
R GE V + ++ A+ D+IR FC+ +++ +
Sbjct: 475 ARYGESVLACVIPRDPAEAPTLDEIRAFCRDRLASY 510
>gi|424851538|ref|ZP_18275935.1| dicarboxylate-CoA ligase PimA [Rhodococcus opacus PD630]
gi|356666203|gb|EHI46274.1| dicarboxylate-CoA ligase PimA [Rhodococcus opacus PD630]
Length = 546
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 88/161 (54%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP GTPGEL RG+ MLGYW + +KT E I RW+ TG
Sbjct: 369 LEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAEAIDAGRWMHTG------- 421
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ DGY + GRIKDM+IRGGEN+YP
Sbjct: 422 ------------------------------DIGVMDSDGYVAITGRIKDMVIRGGENVYP 451
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPD + GEE+ + +++K+ A+
Sbjct: 452 REIEEFLYTHPDILDAQVIGVPDAKYGEELMVWVRMKDGAE 492
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
AGR + D V+ DGY + GRIKDM+IRGGEN+YP+EIEEF+ THP++L+A GVP
Sbjct: 414 AGRWMHTGDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVP 473
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
D + GEE+ + +++K+ A+ L+A +R FC GK++ +
Sbjct: 474 DAKYGEELMVWVRMKDGAEPLDAAKVREFCTGKLAHY 510
>gi|111023051|ref|YP_706023.1| AMP-binding protein [Rhodococcus jostii RHA1]
gi|110822581|gb|ABG97865.1| CoA ligase [Rhodococcus jostii RHA1]
Length = 545
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 88/161 (54%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP GTPGEL RG+ MLGYW + +KT E I RW+ TG
Sbjct: 368 LEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAEAIDAGRWMHTG------- 420
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ DGY + GRIKDM+IRGGEN+YP
Sbjct: 421 ------------------------------DIGVMDSDGYVAITGRIKDMVIRGGENVYP 450
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPD + GEE+ + +++K+ A+
Sbjct: 451 REIEEFLYTHPDILDAQVIGVPDAKYGEELMVWVRMKDGAE 491
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
AGR + D V+ DGY + GRIKDM+IRGGEN+YP+EIEEF+ THP++L+A GVP
Sbjct: 413 AGRWMHTGDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVP 472
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
D + GEE+ + +++K+ A+ L+A +R FC GK++ +
Sbjct: 473 DAKYGEELMVWVRMKDGAEPLDAAKVREFCTGKLAHY 509
>gi|397736475|ref|ZP_10503157.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
gi|396927665|gb|EJI94892.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
Length = 545
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 88/161 (54%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP GTPGEL RG+ MLGYW + +KT E I RW+ TG
Sbjct: 368 LEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAEAIDAGRWMHTG------- 420
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ DGY + GRIKDM+IRGGEN+YP
Sbjct: 421 ------------------------------DIGVMDSDGYVAITGRIKDMVIRGGENVYP 450
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPD + GEE+ + +++K+ A+
Sbjct: 451 REIEEFLYTHPDILDAQVIGVPDAKYGEELMVWVRMKDGAE 491
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
AGR + D V+ DGY + GRIKDM+IRGGEN+YP+EIEEF+ THP++L+A GVP
Sbjct: 413 AGRWMHTGDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVP 472
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
D + GEE+ + +++K+ A+ L+A +R FC GK++ +
Sbjct: 473 DAKYGEELMVWVRMKDGAEPLDAAKVREFCTGKLAHY 509
>gi|385680892|ref|ZP_10054820.1| AMP-binding domain protein [Amycolatopsis sp. ATCC 39116]
Length = 533
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 88/161 (54%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP G PGEL RG+ MLGYW+ KT E I RW+ TG
Sbjct: 356 LEVKIVDPETGLTVPRGEPGELCTRGYSVMLGYWDQPDKTAEVIDKARWMHTG------- 408
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ ++GY Q+ GRIKDM+IRGGENIYP
Sbjct: 409 ------------------------------DLGVMDDEGYIQITGRIKDMVIRGGENIYP 438
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP+VL+A GVPD+R GEE+ I+++E A+
Sbjct: 439 REIEEFLYTHPDVLDAQVIGVPDQRYGEELMAWIRMREGAQ 479
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Query: 392 RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDE 451
R + D V+ ++GY Q+ GRIKDM+IRGGENIYP+EIEEF+ THP+VL+A GVPD+
Sbjct: 403 RWMHTGDLGVMDDEGYIQITGRIKDMVIRGGENIYPREIEEFLYTHPDVLDAQVIGVPDQ 462
Query: 452 RMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
R GEE+ I+++E A+ L A+ +R FC GK++ +
Sbjct: 463 RYGEELMAWIRMREGAQPLTAESLREFCTGKLAHY 497
>gi|118467988|ref|YP_889882.1| AMP-binding protein [Mycobacterium smegmatis str. MC2 155]
gi|399989884|ref|YP_006570234.1| Fatty-acid-CoA ligase FadD35 [Mycobacterium smegmatis str. MC2 155]
gi|118169275|gb|ABK70171.1| acyl-CoA synthase [Mycobacterium smegmatis str. MC2 155]
gi|399234446|gb|AFP41939.1| Fatty-acid-CoA ligase FadD35 [Mycobacterium smegmatis str. MC2 155]
Length = 537
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 86/156 (55%), Gaps = 38/156 (24%)
Query: 20 QAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K++D + V G PGE RG+ MLGYW D++KT+E + D W+ TG
Sbjct: 360 EIKIIDPDTGETVERGQPGEFCTRGYSVMLGYWNDDEKTREAVDADGWMHTG-------- 411
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+REDGY +VGRIKDM+IRGGENIYP+
Sbjct: 412 -----------------------------DLAVMREDGYCTIVGRIKDMVIRGGENIYPR 442
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
EIEEF+ THP++ +A GVPDER GEE+ I++K
Sbjct: 443 EIEEFLYTHPDIDDAQVIGVPDERYGEEICAWIRMK 478
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+REDGY +VGRIKDM+IRGGENIYP+EIEEF+ THP++ +A GVPDER GEE+
Sbjct: 412 DLAVMREDGYCTIVGRIKDMVIRGGENIYPREIEEFLYTHPDIDDAQVIGVPDERYGEEI 471
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSKF 485
I++K L+AD +R F GK++ +
Sbjct: 472 CAWIRMKPGRPPLDADKVREFASGKLAHY 500
>gi|441215330|ref|ZP_20976558.1| long-chain fatty-acid-CoA ligase [Mycobacterium smegmatis MKD8]
gi|440624839|gb|ELQ86694.1| long-chain fatty-acid-CoA ligase [Mycobacterium smegmatis MKD8]
Length = 537
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 86/156 (55%), Gaps = 38/156 (24%)
Query: 20 QAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K++D + V G PGE RG+ MLGYW D++KT+E + D W+ TG
Sbjct: 360 EIKIIDPDTGETVERGQPGEFCTRGYSVMLGYWNDDEKTREAVDADGWMHTG-------- 411
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+REDGY +VGRIKDM+IRGGENIYP+
Sbjct: 412 -----------------------------DLAVMREDGYCTIVGRIKDMVIRGGENIYPR 442
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
EIEEF+ THP++ +A GVPDER GEE+ I++K
Sbjct: 443 EIEEFLYTHPDIDDAQVIGVPDERYGEEICAWIRMK 478
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+REDGY +VGRIKDM+IRGGENIYP+EIEEF+ THP++ +A GVPDER GEE+
Sbjct: 412 DLAVMREDGYCTIVGRIKDMVIRGGENIYPREIEEFLYTHPDIDDAQVIGVPDERYGEEI 471
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSKF 485
I++K L+AD +R F GK++ +
Sbjct: 472 CAWIRMKPGRPPLDADKVREFAAGKLAHY 500
>gi|375139821|ref|YP_005000470.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359820442|gb|AEV73255.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 541
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 92/174 (52%), Gaps = 39/174 (22%)
Query: 19 FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + IV G GE RG+ MLGYWED KT E I P+ W+ TG
Sbjct: 361 VEIKIVDPDTGDIVERGQTGEFCTRGYSVMLGYWEDRAKTDEAIDPEGWMHTG------- 413
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R+DGY VVGRIKDM+IRGGENIYP
Sbjct: 414 ------------------------------DLAVMRDDGYCNVVGRIKDMVIRGGENIYP 443
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN-AKLNAYEDKSISSD 190
+EIEEF+ THP+V +A GVPDE+ GEEV +++K L+A + +SD
Sbjct: 444 REIEEFLYTHPDVDDAQVIGVPDEKYGEEVCAWVRMKPGRTPLDAQALRDFASD 497
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+R+DGY VVGRIKDM+IRGGENIYP+EIEEF+ THP+V +A GVPDE+ GEEV
Sbjct: 414 DLAVMRDDGYCNVVGRIKDMVIRGGENIYPREIEEFLYTHPDVDDAQVIGVPDEKYGEEV 473
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSKF 485
+++K L+A +R F K++ +
Sbjct: 474 CAWVRMKPGRTPLDAQALRDFASDKLAHY 502
>gi|333922026|ref|YP_004495607.1| Substrate-CoA ligase [Amycolicicoccus subflavus DQS3-9A1]
gi|333484247|gb|AEF42807.1| Substrate-CoA ligase [Amycolicicoccus subflavus DQS3-9A1]
Length = 556
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 88/161 (54%), Gaps = 38/161 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP GTPGE RG+ MLGYW+ KT E I RW+ TG
Sbjct: 380 LEIKIVDPATGQTVPRGTPGEFCTRGYSVMLGYWDQPDKTAEAIDAARWMHTG------- 432
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ ++GY + GRIKDM+IRGGEN+YP
Sbjct: 433 ------------------------------DIAVMDDEGYVSITGRIKDMVIRGGENVYP 462
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP+VL+A GVPDE+ GEE+ ++L+E+A+
Sbjct: 463 REIEEFLYTHPDVLDAQVIGVPDEKYGEELMAWVQLREDAE 503
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ ++GY + GRIKDM+IRGGEN+YP+EIEEF+ THP+VL+A GVP
Sbjct: 425 AARWMHTGDIAVMDDEGYVSITGRIKDMVIRGGENVYPREIEEFLYTHPDVLDAQVIGVP 484
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
DE+ GEE+ ++L+E+A+ L A+ +R FC GK++ +
Sbjct: 485 DEKYGEELMAWVQLREDAEPLTAEALREFCTGKLAHY 521
>gi|402899613|ref|XP_003912785.1| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA synthetase family member
2, mitochondrial [Papio anubis]
Length = 642
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 81/156 (51%), Gaps = 37/156 (23%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
TPGEL IRG+C MLGYW + QKT+E + D+W RTG
Sbjct: 482 LNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYRTG---------------------- 519
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E
Sbjct: 520 ---------------DIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQE 564
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
GV D+RMGEE+ I+LK+ + A E K+
Sbjct: 565 VQVVGVKDDRMGEEICACIRLKDGEETTAEEMKAFC 600
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 520 DIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 579
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + A++++ FCKGK+S F
Sbjct: 580 CACIRLKDGEETTAEEMKAFCKGKISHF 607
>gi|254385476|ref|ZP_05000803.1| acyl-CoA synthetase [Streptomyces sp. Mg1]
gi|194344348|gb|EDX25314.1| acyl-CoA synthetase [Streptomyces sp. Mg1]
Length = 546
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 86/161 (53%), Gaps = 38/161 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD R VP G PGEL RG+ MLGYW + ++T E + RW+ TG
Sbjct: 368 LEVKVVDPATGRTVPRGEPGELCTRGYSVMLGYWGEPERTAEAVDAARWMHTG------- 420
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ EDGY + GRIKDM+IRGGEN+YP
Sbjct: 421 ------------------------------DLAVMDEDGYLSITGRIKDMVIRGGENLYP 450
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP+VL+ GVPD + GEE+ ++++E A+
Sbjct: 451 REIEEFLHTHPDVLDVQVIGVPDPKYGEELMAWVRMREGAE 491
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E A R + D V+ EDGY + GRIKDM+IRGGEN+YP+EIEEF+ T
Sbjct: 400 YWGEPERTAEAVDAARWMHTGDLAVMDEDGYLSITGRIKDMVIRGGENLYPREIEEFLHT 459
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
HP+VL+ GVPD + GEE+ ++++E A+ L A+ +R +C G+++ F
Sbjct: 460 HPDVLDVQVIGVPDPKYGEELMAWVRMREGAEPLTAETVRAYCAGRLAHF 509
>gi|398781291|ref|ZP_10545417.1| AMP-binding domain protein [Streptomyces auratus AGR0001]
gi|396997535|gb|EJJ08491.1| AMP-binding domain protein [Streptomyces auratus AGR0001]
Length = 546
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 86/158 (54%), Gaps = 38/158 (24%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KV D + + VP GTPGEL RG+ MLGYWE+ ++T E I RW+ TG
Sbjct: 367 IEVKVADPASGVTVPRGTPGELCTRGYSVMLGYWEEPERTAEVIDAARWMHTG------- 419
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ +DGY ++VGRIKDMIIRGGEN+YP
Sbjct: 420 ------------------------------DLAVMNDDGYVRIVGRIKDMIIRGGENVYP 449
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 175
+EIEEF+ +HP + + GVPDE+ GEE+ + L++
Sbjct: 450 REIEEFLYSHPKIADVQVVGVPDEKYGEEIAACVILRD 487
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E A R + D V+ +DGY ++VGRIKDMIIRGGEN+YP+EIEEF+ +
Sbjct: 399 YWEEPERTAEVIDAARWMHTGDLAVMNDDGYVRIVGRIKDMIIRGGENVYPREIEEFLYS 458
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKE-NAKLNADDIRTFCKGKVSKF 485
HP + + GVPDE+ GEE+ + L++ L D++ FC+ +++ +
Sbjct: 459 HPKIADVQVVGVPDEKYGEEIAACVILRDPEDPLTRDELARFCRSRLAHY 508
>gi|170740558|ref|YP_001769213.1| AMP-binding domain-containing protein [Methylobacterium sp. 4-46]
gi|168194832|gb|ACA16779.1| AMP-dependent synthetase and ligase [Methylobacterium sp. 4-46]
Length = 565
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 86/167 (51%), Gaps = 37/167 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD RIVP GTPGEL RG+ M GYW+D +KT E W+ TG
Sbjct: 386 EVKIVDAEGRIVPRGTPGELCTRGYSVMRGYWDDPEKTAEVRDAAGWMHTG--------- 436
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D L + G+ +VGRIKD++IRGGEN+YP+E
Sbjct: 437 ----------------------------DLATLDDQGFCNIVGRIKDLVIRGGENVYPRE 468
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
+EEF+ HP + E +GVPD R GEE+ +KL+ A L A E ++
Sbjct: 469 VEEFLYRHPAIQEVQVFGVPDPRYGEELCAWVKLRPGATLTAEELRA 515
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Query: 381 EENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
E+ V D+AG + D L + G+ +VGRIKD++IRGGEN+YP+E+EEF+ HP +
Sbjct: 421 EKTAEVRDAAG-WMHTGDLATLDDQGFCNIVGRIKDLVIRGGENVYPREVEEFLYRHPAI 479
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
E +GVPD R GEE+ +KL+ A L A+++R C G+++
Sbjct: 480 QEVQVFGVPDPRYGEELCAWVKLRPGATLTAEELRAHCGGQIA 522
>gi|363422556|ref|ZP_09310631.1| AMP-binding domain protein [Rhodococcus pyridinivorans AK37]
gi|359732854|gb|EHK81861.1| AMP-binding domain protein [Rhodococcus pyridinivorans AK37]
Length = 555
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 85/161 (52%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD VP G PGEL RG+ MLGYW+ KT E I RW+ TG
Sbjct: 372 LEVKVVDPVTGLTVPRGEPGELCTRGYSVMLGYWDQPDKTAEAIDAARWMHTG------- 424
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ EDGY V GRIKDM+IRGGENIYP
Sbjct: 425 ------------------------------DIGVMDEDGYVSVTGRIKDMVIRGGENIYP 454
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPD + GEE+ I+++E A+
Sbjct: 455 REIEEFLYTHPDILDAQVVGVPDTKYGEELMAWIRMREGAE 495
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ EDGY V GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVP
Sbjct: 417 AARWMHTGDIGVMDEDGYVSVTGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVVGVP 476
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
D + GEE+ I+++E A+ L+AD +RTFC GK++ +
Sbjct: 477 DTKYGEELMAWIRMREGAEPLDADSLRTFCTGKLAHY 513
>gi|298245487|ref|ZP_06969293.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM
44963]
gi|297552968|gb|EFH86833.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM
44963]
Length = 582
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 87/163 (53%), Gaps = 38/163 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+V+ + +IVP G PGEL RG+ MLGYW++ + T+ I RW+ TG
Sbjct: 398 LEIKIVNPESGQIVPQGIPGELCTRGYSVMLGYWDNPEATQAAIDQARWMHTG------- 450
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + E+GY +VGRIKDMIIRGGENIYP
Sbjct: 451 ------------------------------DLATMDEEGYINIVGRIKDMIIRGGENIYP 480
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
+EIEEF+ THP V + GVPDER GEE+ IKLK A ++
Sbjct: 481 REIEEFLYTHPQVSDVQVIGVPDERYGEEIAAWIKLKPGASVS 523
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 294 PVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITP-----ALKGLYHFK---KW 345
P+ + RN+I+ + + Q I Y E V++ L +P A G H K
Sbjct: 346 PIEVMRNVINRMHMSQVEIC---YGMTETAPVSVQSRLDSPFEKRVATVGQIHPHLEIKI 402
Query: 346 MNPKFSTTTRKVALTWPNSMDSEARIYHYKKYLREEENITVPDSA---GRSIFEKDQFVL 402
+NP+ P + E Y L +N +A R + D +
Sbjct: 403 VNPESGQIV-------PQGIPGELCTRGYSVMLGYWDNPEATQAAIDQARWMHTGDLATM 455
Query: 403 REDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIK 462
E+GY +VGRIKDMIIRGGENIYP+EIEEF+ THP V + GVPDER GEE+ IK
Sbjct: 456 DEEGYINIVGRIKDMIIRGGENIYPREIEEFLYTHPQVSDVQVIGVPDERYGEEIAAWIK 515
Query: 463 LKENAKLNADDIRTFCKGKVSKF 485
LK A ++ +D+R FC GK++ +
Sbjct: 516 LKPGASVSQEDLRAFCLGKIAHY 538
>gi|440699134|ref|ZP_20881436.1| AMP-binding domain protein [Streptomyces turgidiscabies Car8]
gi|440278386|gb|ELP66431.1| AMP-binding domain protein [Streptomyces turgidiscabies Car8]
Length = 527
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 92/177 (51%), Gaps = 44/177 (24%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD N P GT GEL RG+ MLGYW++ +KT E++ P RW+ TG
Sbjct: 354 IEVKVVDPANGTTQPRGTAGELCTRGYSVMLGYWQEPEKTAESVDPGRWMHTG------- 406
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY ++VGRIKDMIIRGGENIYP
Sbjct: 407 ------------------------------DLAVMREDGYVEIVGRIKDMIIRGGENIYP 436
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN------AKLNAYEDKSIS 188
+EIEEF+ HP + + GVP ER GEEV + E+ A+L A+ + ++
Sbjct: 437 REIEEFLYAHPKIADVQVVGVPHERYGEEVLACVIPHEDTEPLTLAELQAFCEGRLA 493
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y +E E GR + D V+REDGY ++VGRIKDMIIRGGENIYP+EIEEF+
Sbjct: 386 YWQEPEKTAESVDPGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYA 445
Query: 437 HPNVLEAYAYGVPDERMGEEV-GISIKLKENAKLNADDIRTFCKGKVSKF 485
HP + + GVP ER GEEV I ++ L +++ FC+G+++ +
Sbjct: 446 HPKIADVQVVGVPHERYGEEVLACVIPHEDTEPLTLAELQAFCEGRLAHY 495
>gi|418472696|ref|ZP_13042408.1| AMP-binding domain protein [Streptomyces coelicoflavus ZG0656]
gi|371546689|gb|EHN75137.1| AMP-binding domain protein [Streptomyces coelicoflavus ZG0656]
Length = 536
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 90/177 (50%), Gaps = 44/177 (24%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + VP G GEL RG+ MLGYWE+ KT E I P RW+ TG
Sbjct: 363 IEVKVVDPVTGVTVPRGAAGELRTRGYSVMLGYWEEPGKTAEAIDPGRWMHTG------- 415
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY ++VGRIKDMIIRGGENIYP
Sbjct: 416 ------------------------------DLAVMREDGYVEIVGRIKDMIIRGGENIYP 445
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA------KLNAYEDKSIS 188
+E+EEF+ HP + + GVP ER GEEV + ++ A +L AY D ++
Sbjct: 446 REVEEFLYAHPKIADVQVVGVPHERYGEEVLACVVPRDAADPLTLEELRAYCDGQLA 502
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 74/132 (56%), Gaps = 4/132 (3%)
Query: 358 ALTWPNSMDSEARIYHYK---KYLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRI 414
+T P E R Y Y E GR + D V+REDGY ++VGRI
Sbjct: 373 GVTVPRGAAGELRTRGYSVMLGYWEEPGKTAEAIDPGRWMHTGDLAVMREDGYVEIVGRI 432
Query: 415 KDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNADD 473
KDMIIRGGENIYP+E+EEF+ HP + + GVP ER GEEV + ++ A L ++
Sbjct: 433 KDMIIRGGENIYPREVEEFLYAHPKIADVQVVGVPHERYGEEVLACVVPRDAADPLTLEE 492
Query: 474 IRTFCKGKVSKF 485
+R +C G+++ +
Sbjct: 493 LRAYCDGQLAHY 504
>gi|254516352|ref|ZP_05128411.1| AMP-dependent synthetase and ligase [gamma proteobacterium NOR5-3]
gi|219674775|gb|EED31142.1| AMP-dependent synthetase and ligase [gamma proteobacterium NOR5-3]
Length = 569
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 94/178 (52%), Gaps = 39/178 (21%)
Query: 5 NPTDLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + T+ + K+VD NN++VP GE+ RG+ M YW++ ++T ETI
Sbjct: 369 DPLDKRVETVGKPGPHLETKIVDENNQLVPINERGEICTRGYSVMSAYWDEPERTAETID 428
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
+ WL +G D ++ EDGY +VVG
Sbjct: 429 SEGWLHSG-------------------------------------DIGIMDEDGYVRVVG 451
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
R KDMIIRGGENIYP+E+EEF+ THP + + +G+P E+ GEEV I+L+E A L+
Sbjct: 452 RTKDMIIRGGENIYPREVEEFLHTHPAIQDVQVFGIPHEKYGEEVCAWIQLQEGADLD 509
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ EDGY +VVGR KDMIIRGGENIYP+E+EEF+ THP + + +G+P E+ GEEV
Sbjct: 437 DIGIMDEDGYVRVVGRTKDMIIRGGENIYPREVEEFLHTHPAIQDVQVFGIPHEKYGEEV 496
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+L+E A L+ +R F +++ F
Sbjct: 497 CAWIQLQEGADLDEKLLREFSHEQITHF 524
>gi|145225443|ref|YP_001136121.1| AMP-binding domain-containing protein [Mycobacterium gilvum
PYR-GCK]
gi|145217929|gb|ABP47333.1| AMP-dependent synthetase and ligase [Mycobacterium gilvum PYR-GCK]
Length = 538
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 93/174 (53%), Gaps = 39/174 (22%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD IV GTPGE RG+ MLGYW +++KT + I D W+ TG
Sbjct: 362 VEIKIVDPETGEIVERGTPGEFCTRGYSVMLGYWREDEKTAQAIDADGWMHTG------- 414
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R DGY +VGRIKD++IRGGENIYP
Sbjct: 415 ------------------------------DLAVMRPDGYCNIVGRIKDVVIRGGENIYP 444
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN-AKLNAYEDKSISSD 190
+EIEEF+ THP+V +A+ GVPD+R GEEV I+++ L+A + ++D
Sbjct: 445 REIEEFLYTHPDVEDAHVIGVPDDRYGEEVCAWIRMRPGRTALDAAAVREFATD 498
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y RE+E A + D V+R DGY +VGRIKD++IRGGENIYP+EIEEF+ T
Sbjct: 394 YWREDEKTAQAIDADGWMHTGDLAVMRPDGYCNIVGRIKDVVIRGGENIYPREIEEFLYT 453
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKEN-AKLNADDIRTFCKGKVSKF 485
HP+V +A+ GVPD+R GEEV I+++ L+A +R F K++ +
Sbjct: 454 HPDVEDAHVIGVPDDRYGEEVCAWIRMRPGRTALDAAAVREFATDKLAHY 503
>gi|456388153|gb|EMF53643.1| long-chain-fatty-acid-CoA ligase [Streptomyces bottropensis ATCC
25435]
Length = 530
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 89/177 (50%), Gaps = 44/177 (24%)
Query: 19 FQAKVVDHNNRIV-PFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + P GT GEL RG+ MLGYWE+ +KT E + P RW+ TG
Sbjct: 357 IEVKVVDPVTGVTRPRGTAGELCTRGYSVMLGYWEEPEKTAEAVDPGRWMHTG------- 409
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D +REDGY ++VGRIKDMIIRGGENIYP
Sbjct: 410 ------------------------------DLATMREDGYVEIVGRIKDMIIRGGENIYP 439
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA------KLNAYEDKSIS 188
+EIEEF+ HP + + GVP ER GEEV + E A +L AY D ++
Sbjct: 440 REIEEFLYGHPKIADVQVVGVPHERYGEEVLACVIPHEGAEPLTLEELRAYCDGQLA 496
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E GR + D +REDGY ++VGRIKDMIIRGGENIYP+EIEEF+
Sbjct: 389 YWEEPEKTAEAVDPGRWMHTGDLATMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYG 448
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
HP + + GVP ER GEEV + E A+ L +++R +C G+++ +
Sbjct: 449 HPKIADVQVVGVPHERYGEEVLACVIPHEGAEPLTLEELRAYCDGQLAHY 498
>gi|379734139|ref|YP_005327644.1| short-chain acyl-CoA synthetase [Blastococcus saxobsidens DD2]
gi|378781945|emb|CCG01599.1| short-chain acyl-CoA synthetase [Blastococcus saxobsidens DD2]
Length = 551
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 88/161 (54%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + VP GTPGE RG+ MLGYWE+ T ++I RW+ TG
Sbjct: 366 LEVKVVDPATGLTVPRGTPGEFCTRGYSVMLGYWEEPDVTAKSIDSARWMHTG------- 418
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ E GY +VGRIKDM+IRGGEN+YP
Sbjct: 419 ------------------------------DLAVMDEAGYLNIVGRIKDMVIRGGENVYP 448
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++++A GVPDER GEE+ ++L+E A+
Sbjct: 449 REIEEFLYTHPDIVDAQVIGVPDERYGEELMAWVRLREGAE 489
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 84/133 (63%), Gaps = 6/133 (4%)
Query: 358 ALTWPNSMDSEARIYHYKKYLR--EEENITVP--DSAGRSIFEKDQFVLREDGYGQVVGR 413
LT P E Y L EE ++T DSA R + D V+ E GY +VGR
Sbjct: 376 GLTVPRGTPGEFCTRGYSVMLGYWEEPDVTAKSIDSA-RWMHTGDLAVMDEAGYLNIVGR 434
Query: 414 IKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LNAD 472
IKDM+IRGGEN+YP+EIEEF+ THP++++A GVPDER GEE+ ++L+E A+ L AD
Sbjct: 435 IKDMVIRGGENVYPREIEEFLYTHPDIVDAQVIGVPDERYGEELMAWVRLREGAEPLTAD 494
Query: 473 DIRTFCKGKVSKF 485
++ +C GK++ +
Sbjct: 495 ALKEYCSGKLAHY 507
>gi|312372157|gb|EFR20178.1| hypothetical protein AND_20527 [Anopheles darlingi]
Length = 380
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 84/144 (58%), Gaps = 38/144 (26%)
Query: 1 MWDMNPTDLQFSTLS-SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKE 59
+++ P D+Q + + ++AKV+D +PFG GEL +RG+ MLGYW DE+KTKE
Sbjct: 274 LFEETPEDVQQTVGHVTDHYEAKVIDKEGHTIPFGVAGELCVRGYGTMLGYWADEKKTKE 333
Query: 60 TIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQ 119
TI DRWLRTG +QF+LREDGYG+
Sbjct: 334 TIDADRWLRTG-------------------------------------NQFMLREDGYGR 356
Query: 120 VVGRIKDMIIRGGENIYPKEIEEF 143
+VGR+K+++IRGGENIYPKE+E+F
Sbjct: 357 IVGRLKEVVIRGGENIYPKEVEDF 380
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 360 TWPNSMDSEARIYHYKKYL---REEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKD 416
T P + E + Y L +E+ A R + +QF+LREDGYG++VGR+K+
Sbjct: 304 TIPFGVAGELCVRGYGTMLGYWADEKKTKETIDADRWLRTGNQFMLREDGYGRIVGRLKE 363
Query: 417 MIIRGGENIYPKEIEEF 433
++IRGGENIYPKE+E+F
Sbjct: 364 VVIRGGENIYPKEVEDF 380
>gi|257057367|ref|YP_003135199.1| AMP-binding domain-containing protein [Saccharomonospora viridis
DSM 43017]
gi|256587239|gb|ACU98372.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora viridis DSM 43017]
Length = 552
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 87/161 (54%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+AK++D + VP GT GEL RG+ MLGYWE KT E I RW+ TG
Sbjct: 367 LEAKIIDPETGLTVPRGTHGELCTRGYSVMLGYWEQPDKTAEVIDEARWMHTG------- 419
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ EDGY + GR+KDM+IR GENIYP
Sbjct: 420 ------------------------------DLAVMDEDGYVNITGRLKDMVIRDGENIYP 449
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPDER GEE+ ++++E A+
Sbjct: 450 REIEEFLYTHPDILDAQVIGVPDERYGEELMAWVRMREGAE 490
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 82/135 (60%), Gaps = 6/135 (4%)
Query: 356 KVALTWPNSMDSEARIYHYKKYL----REEENITVPDSAGRSIFEKDQFVLREDGYGQVV 411
+ LT P E Y L + ++ V D A R + D V+ EDGY +
Sbjct: 375 ETGLTVPRGTHGELCTRGYSVMLGYWEQPDKTAEVIDEA-RWMHTGDLAVMDEDGYVNIT 433
Query: 412 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LN 470
GR+KDM+IR GENIYP+EIEEF+ THP++L+A GVPDER GEE+ ++++E A+ L
Sbjct: 434 GRLKDMVIRDGENIYPREIEEFLYTHPDILDAQVIGVPDERYGEELMAWVRMREGAEPLT 493
Query: 471 ADDIRTFCKGKVSKF 485
A+ +R FC GK++ +
Sbjct: 494 AESLREFCTGKLAHY 508
>gi|355568519|gb|EHH24800.1| hypothetical protein EGK_08523, partial [Macaca mulatta]
Length = 639
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 80/156 (51%), Gaps = 37/156 (23%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
TPGEL IRG+C MLGYW + QKT E + D+W RTG
Sbjct: 479 LNTPGELCIRGYCVMLGYWGEPQKTGEAVDQDKWYRTG---------------------- 516
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E
Sbjct: 517 ---------------DIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQE 561
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
GV D+RMGEE+ I+LK+ + A E K+
Sbjct: 562 VQVVGVKDDRMGEEICACIRLKDGEETTAEEMKAFC 597
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 517 DIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 576
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + A++++ FCKGK+S F
Sbjct: 577 CACIRLKDGEETTAEEMKAFCKGKISHF 604
>gi|75075869|sp|Q4R4Z9.1|ACSF2_MACFA RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|67970968|dbj|BAE01826.1| unnamed protein product [Macaca fascicularis]
Length = 618
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 80/156 (51%), Gaps = 37/156 (23%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
TPGEL IRG+C MLGYW + QKT E + D+W RTG
Sbjct: 458 LNTPGELCIRGYCVMLGYWGEPQKTGEAVDQDKWYRTG---------------------- 495
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E
Sbjct: 496 ---------------DIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQE 540
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
GV D+RMGEE+ I+LK+ + A E K+
Sbjct: 541 VQVVGVKDDRMGEEICACIRLKDGEETTAEEMKAFC 576
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 496 DIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 555
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + A++++ FCKGK+S F
Sbjct: 556 CACIRLKDGEETTAEEMKAFCKGKISHF 583
>gi|109114316|ref|XP_001097818.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Macaca mulatta]
Length = 618
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 80/156 (51%), Gaps = 37/156 (23%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
TPGEL IRG+C MLGYW + QKT E + D+W RTG
Sbjct: 458 LNTPGELCIRGYCVMLGYWGEPQKTGEAVDQDKWYRTG---------------------- 495
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E
Sbjct: 496 ---------------DIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQE 540
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
GV D+RMGEE+ I+LK+ + A E K+
Sbjct: 541 VQVVGVKDDRMGEEICACIRLKDGEETTAEEMKAFC 576
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 496 DIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 555
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + A++++ FCKGK+S F
Sbjct: 556 CACIRLKDGEETTAEEMKAFCKGKISHF 583
>gi|441160730|ref|ZP_20967802.1| AMP-binding domain protein [Streptomyces rimosus subsp. rimosus
ATCC 10970]
gi|440616867|gb|ELQ79989.1| AMP-binding domain protein [Streptomyces rimosus subsp. rimosus
ATCC 10970]
Length = 584
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 85/160 (53%), Gaps = 38/160 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD VP G PGEL RG+ MLGYWE+ ++T E I +RW+ TG
Sbjct: 383 IEVKVVDPATGATVPRGEPGELCTRGYSVMLGYWEEPERTDEAIDAERWMHTG------- 435
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ +DGY ++VGRIKDMIIRGGEN+YP
Sbjct: 436 ------------------------------DLAVMNDDGYLRIVGRIKDMIIRGGENVYP 465
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ THP + + GVPD + GEE+ + L++ A
Sbjct: 466 REIEEFLYTHPKIADVQVVGVPDAKYGEEIAACVILRDPA 505
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E A R + D V+ +DGY ++VGRIKDMIIRGGEN+YP+EIEEF+ T
Sbjct: 415 YWEEPERTDEAIDAERWMHTGDLAVMNDDGYLRIVGRIKDMIIRGGENVYPREIEEFLYT 474
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKE-NAKLNADDIRTFCKGKVSKF 485
HP + + GVPD + GEE+ + L++ A L D++ FC+ +++ +
Sbjct: 475 HPKIADVQVVGVPDAKYGEEIAACVILRDPAAGLTRDELARFCRSRLAHY 524
>gi|355753990|gb|EHH57955.1| hypothetical protein EGM_07709, partial [Macaca fascicularis]
Length = 639
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 80/156 (51%), Gaps = 37/156 (23%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
TPGEL IRG+C MLGYW + QKT E + D+W RTG
Sbjct: 479 LNTPGELCIRGYCVMLGYWGEPQKTGEAVDQDKWYRTG---------------------- 516
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E
Sbjct: 517 ---------------DIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQE 561
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
GV D+RMGEE+ I+LK+ + A E K+
Sbjct: 562 VQVVGVKDDRMGEEICACIRLKDGEETTAEEMKAFC 597
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 517 DIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 576
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + A++++ FCKGK+S F
Sbjct: 577 CACIRLKDGEETTAEEMKAFCKGKISHF 604
>gi|183983827|ref|YP_001852118.1| AMP-binding protein [Mycobacterium marinum M]
gi|183177153|gb|ACC42263.1| fatty-acid-CoA ligase FadD35 [Mycobacterium marinum M]
Length = 547
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 87/160 (54%), Gaps = 38/160 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD RIVP GT GE RG+ M GYW+ ++T E I P+ W+ TG
Sbjct: 369 LEIKVVDPATGRIVPRGTAGEFCTRGYSVMSGYWKAPERTAEVIDPEGWMHTG------- 421
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D ++ E GY Q+ GRIKD+++RGGENI P
Sbjct: 422 ------------------------------DLALMDECGYVQITGRIKDIVVRGGENISP 451
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ +HP++++A+ GVPDERMGEE+ +KL+ A
Sbjct: 452 REIEEFLHSHPDIVDAHVVGVPDERMGEELMAVVKLRAGA 491
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E GY Q+ GRIKD+++RGGENI P+EIEEF+ +HP++++A+ GVPDERMGEE+
Sbjct: 422 DLALMDECGYVQITGRIKDIVVRGGENISPREIEEFLHSHPDIVDAHVVGVPDERMGEEL 481
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
+KL+ A +L +R +C G+++KF
Sbjct: 482 MAVVKLRAGAPELTTGLLREYCAGQIAKF 510
>gi|390463546|ref|XP_002748483.2| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA synthetase family member
2, mitochondrial [Callithrix jacchus]
Length = 704
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 80/154 (51%), Gaps = 37/154 (24%)
Query: 35 TPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQ 94
TPGEL IRG+C MLGYW + QKT+E +G D+W RTG
Sbjct: 546 TPGELFIRGYCVMLGYWGEPQKTEEVVGQDKWYRTG------------------------ 581
Query: 95 QQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAY 154
D ++ E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E
Sbjct: 582 -------------DIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELEDFFHTHPKVQEVQ 628
Query: 155 AYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
GV D RMGEE+ I+LK K E K+
Sbjct: 629 VVGVKDYRMGEEICACIRLKNGEKTTPEEIKAFC 662
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D RMGEE+
Sbjct: 582 DIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELEDFFHTHPKVQEVQVVGVKDYRMGEEI 641
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK K ++I+ FCKGK+S F
Sbjct: 642 CACIRLKNGEKTTPEEIKAFCKGKISHF 669
>gi|119503775|ref|ZP_01625857.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
gi|119460283|gb|EAW41376.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
Length = 378
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 88/171 (51%), Gaps = 37/171 (21%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ KV+D + R+V G GE+ RG+ M GYW D ++T ETI WL +G
Sbjct: 204 EIKVIDDSGRVVTVGEKGEICTRGYSVMQGYWNDPERTAETIDAGGWLHSG--------- 254
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ DGY Q+ GRIKDMIIRGGENIYP+E
Sbjct: 255 ----------------------------DLAVMDGDGYVQIFGRIKDMIIRGGENIYPRE 286
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
IEEF+ HP + E +GVPDE+MGEEV I+L +L+A + K D
Sbjct: 287 IEEFLYQHPAISEVQVFGVPDEKMGEEVCAWIQLNAGHELSADDVKDYCRD 337
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 68/96 (70%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
AG + D V+ DGY Q+ GRIKDMIIRGGENIYP+EIEEF+ HP + E +GVP
Sbjct: 247 AGGWLHSGDLAVMDGDGYVQIFGRIKDMIIRGGENIYPREIEEFLYQHPAISEVQVFGVP 306
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
DE+MGEEV I+L +L+ADD++ +C+ K++ F
Sbjct: 307 DEKMGEEVCAWIQLNAGHELSADDVKDYCRDKITHF 342
>gi|345010053|ref|YP_004812407.1| AMP-dependent synthetase/ligase [Streptomyces violaceusniger Tu
4113]
gi|344036402|gb|AEM82127.1| AMP-dependent synthetase and ligase [Streptomyces violaceusniger Tu
4113]
Length = 574
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 85/161 (52%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD VP GT GEL RG+ MLGYW++ ++T E I RW+ TG
Sbjct: 373 IEVKIVDPVTGATVPRGTRGELCTRGYSVMLGYWQEPERTAEAIDSARWMHTG------- 425
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ +GY Q+VGRIKDMI+RGGEN+YP
Sbjct: 426 ------------------------------DLAVMDGEGYVQIVGRIKDMIVRGGENVYP 455
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP V + GVPDE+ GEEV + L+E AK
Sbjct: 456 REIEEFLHTHPKVADVQVVGVPDEKYGEEVLACVILREGAK 496
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y +E E + R + D V+ +GY Q+VGRIKDMI+RGGEN+YP+EIEEF+ T
Sbjct: 405 YWQEPERTAEAIDSARWMHTGDLAVMDGEGYVQIVGRIKDMIVRGGENVYPREIEEFLHT 464
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
HP V + GVPDE+ GEEV + L+E AK L D++ FC+G+++ +
Sbjct: 465 HPKVADVQVVGVPDEKYGEEVLACVILREGAKTLTRDELARFCRGRLAHY 514
>gi|56478075|ref|YP_159664.1| AMP-binding protein [Aromatoleum aromaticum EbN1]
gi|56314118|emb|CAI08763.1| putative long chain fatty-acid CoA ligase [Aromatoleum aromaticum
EbN1]
Length = 562
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 96/186 (51%), Gaps = 39/186 (20%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + ST+ + K+VD++ RIVP G GEL RG+ MLGYW D +T++ I
Sbjct: 366 DPVERRVSTVGRVQPHLEVKIVDNDGRIVPRGVAGELCTRGYSVMLGYWNDVDRTRDAID 425
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ TG D + ++GY +VG
Sbjct: 426 AAGWMHTG-------------------------------------DLATIDDEGYCNIVG 448
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
RIKDM+IRGGEN+YP+EIEEF+ HP +L+ GVPD++ GEE+ I ++E L+A
Sbjct: 449 RIKDMVIRGGENLYPREIEEFLYRHPKILDVQVVGVPDQKYGEELCAWIIVREGEALSAD 508
Query: 183 EDKSIS 188
E ++
Sbjct: 509 EVRAFC 514
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Query: 388 DSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYG 447
D+AG + D + ++GY +VGRIKDM+IRGGEN+YP+EIEEF+ HP +L+ G
Sbjct: 425 DAAG-WMHTGDLATIDDEGYCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKILDVQVVG 483
Query: 448 VPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
VPD++ GEE+ I ++E L+AD++R FC+G+++
Sbjct: 484 VPDQKYGEELCAWIIVREGEALSADEVRAFCQGQIA 519
>gi|383315473|ref|YP_005376315.1| acyl-CoA synthetase [Frateuria aurantia DSM 6220]
gi|379042577|gb|AFC84633.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Frateuria
aurantia DSM 6220]
Length = 569
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 86/165 (52%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD IVP G PGEL RG+ MLGYW+D +T E I W+ TG
Sbjct: 389 LEVKLVDELGHIVPRGVPGELCTRGYSVMLGYWDDRIRTAEAIDRGGWMHTG-------- 440
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D VL ++GY ++VGR+KDMIIRGGENIYP+
Sbjct: 441 -----------------------------DLAVLDDEGYARIVGRLKDMIIRGGENIYPR 471
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
EIEEF+ THP + + +GV D+R GE+V I+L+E + E
Sbjct: 472 EIEEFLYTHPAIKDVQIFGVADQRFGEQVCAWIQLREGCTTSVEE 516
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 64/88 (72%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D VL ++GY ++VGR+KDMIIRGGENIYP+EIEEF+ THP + + +GV D+R GE+V
Sbjct: 441 DLAVLDDEGYARIVGRLKDMIIRGGENIYPREIEEFLYTHPAIKDVQIFGVADQRFGEQV 500
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+L+E + ++++ +C+ ++ +
Sbjct: 501 CAWIQLREGCTTSVEELQHYCRRHIAYY 528
>gi|390337054|ref|XP_798014.3| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 575
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 93/179 (51%), Gaps = 40/179 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P D QF+T+ + KV+D +IVP PGEL +RG+ NM+GYWE+E+ TK +I
Sbjct: 383 DPQDKQFNTIGRLCQHMEGKVIDPETGQIVPVDVPGELCVRGYANMIGYWENEEATKASI 442
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+W TG D + EDGY +++
Sbjct: 443 DATKWYHTG-------------------------------------DMATMDEDGYCRII 465
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
GR K++II GG NIYP EIE++I THP V + + G+PD+R+GE+V I++K L
Sbjct: 466 GRFKELIIMGGRNIYPVEIEKYIYTHPKVEDVHVIGIPDDRLGEKVVACIRVKAGEDLT 524
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDGY +++GR K++II GG NIYP EIE++I THP V + + G+PD+R+GE+V
Sbjct: 452 DMATMDEDGYCRIIGRFKELIIMGGRNIYPVEIEKYIYTHPKVEDVHVIGIPDDRLGEKV 511
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I++K L +DI+ +C+G++S +
Sbjct: 512 VACIRVKAGEDLTEEDIKEYCQGEISHY 539
>gi|432340260|ref|ZP_19589709.1| AMP-binding domain protein [Rhodococcus wratislaviensis IFP 2016]
gi|430774710|gb|ELB90289.1| AMP-binding domain protein [Rhodococcus wratislaviensis IFP 2016]
Length = 546
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 87/161 (54%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP GTPGEL RG+ MLGYW + +KT E I RW+ TG
Sbjct: 368 LEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAEAIDAGRWMHTG------- 420
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ DGY + GRIKDM+IRGGEN+YP
Sbjct: 421 ------------------------------DIGVMDSDGYVAITGRIKDMVIRGGENVYP 450
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPD + GEE+ + +++K+ +
Sbjct: 451 REIEEFLYTHPDILDAQVIGVPDAKYGEELMVWVRMKDGTE 491
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
AGR + D V+ DGY + GRIKDM+IRGGEN+YP+EIEEF+ THP++L+A GVP
Sbjct: 413 AGRWMHTGDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVP 472
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
D + GEE+ + +++K+ + L+A +R FC GK++ +
Sbjct: 473 DAKYGEELMVWVRMKDGTEPLDAAKVREFCTGKLAHY 509
>gi|433650012|ref|YP_007295014.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
smegmatis JS623]
gi|433299789|gb|AGB25609.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
smegmatis JS623]
Length = 537
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 86/157 (54%), Gaps = 38/157 (24%)
Query: 19 FQAKVVDHNNR-IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + IV G PGE RG+ MLGYW D +KT+E I + W+ TG
Sbjct: 361 IEVKVVDPDTGDIVERGQPGEFCTRGYSLMLGYWNDNEKTREAIDAEGWMHTG------- 413
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY +VGRIKDM+IRGGEN+YP
Sbjct: 414 ------------------------------DLAVMREDGYCNIVGRIKDMVIRGGENVYP 443
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
+EIEEF+ THP++ +A GVPDE+ GEE+ I++K
Sbjct: 444 REIEEFLYTHPDIEDAQVIGVPDEKYGEELCAWIRMK 480
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+REDGY +VGRIKDM+IRGGEN+YP+EIEEF+ THP++ +A GVPDE+ GEE+
Sbjct: 414 DLAVMREDGYCNIVGRIKDMVIRGGENVYPREIEEFLYTHPDIEDAQVIGVPDEKYGEEL 473
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSKF 485
I++K L+AD I+ F GK++ +
Sbjct: 474 CAWIRMKPGRPALDADAIKAFANGKLAHY 502
>gi|318057799|ref|ZP_07976522.1| AMP-binding domain protein [Streptomyces sp. SA3_actG]
gi|318080550|ref|ZP_07987882.1| AMP-binding domain protein [Streptomyces sp. SA3_actF]
Length = 544
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 85/160 (53%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + + VP GT GEL RG+ MLGYWED ++T E + P RW+ TG
Sbjct: 369 LEVKVVDPVSGVTVPRGTQGELCTRGYSVMLGYWEDPERTAEVVDPGRWMHTG------- 421
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D ++REDGY ++ GRIKDMIIRGGENIYP
Sbjct: 422 ------------------------------DLALMREDGYVEIAGRIKDMIIRGGENIYP 451
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ THP + + GVPD R GE V + ++ A
Sbjct: 452 REIEEFLYTHPKISDVQVVGVPDARYGESVLACVIPRDPA 491
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
GR + D ++REDGY ++ GRIKDMIIRGGENIYP+EIEEF+ THP + + GVPD
Sbjct: 415 GRWMHTGDLALMREDGYVEIAGRIKDMIIRGGENIYPREIEEFLYTHPKISDVQVVGVPD 474
Query: 451 ERMGEEVGISIKLKENAKL-NADDIRTFCKGKVSKF 485
R GE V + ++ A D+IR FC+ +++ +
Sbjct: 475 ARYGESVLACVIPRDPADAPTLDEIRAFCRDRLASY 510
>gi|334346140|ref|YP_004554692.1| long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
gi|334102762|gb|AEG50186.1| Long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
Length = 561
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 86/165 (52%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++K++D IVP G PGEL RG+ M+GYW D ++T I + W+ +G
Sbjct: 382 LESKIIDEAGEIVPRGQPGELCTRGYSVMIGYWGDPEQTAAAIDSEGWMHSG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D VL ++GY ++VGR KDMIIRGGEN+YP+
Sbjct: 434 -----------------------------DLAVLDDEGYCKIVGRSKDMIIRGGENVYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
EIEEF+ THP V + GVPD+R GEEV I+ E A L+ E
Sbjct: 465 EIEEFLHTHPAVQDVQVIGVPDDRYGEEVCAWIRCHEGAALSEEE 509
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 65/88 (73%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D VL ++GY ++VGR KDMIIRGGEN+YP+EIEEF+ THP V + GVPD+R GEEV
Sbjct: 434 DLAVLDDEGYCKIVGRSKDMIIRGGENVYPREIEEFLHTHPAVQDVQVIGVPDDRYGEEV 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+ E A L+ +++R FC+G+++ +
Sbjct: 494 CAWIRCHEGAALSEEELRIFCRGRIAHY 521
>gi|315445796|ref|YP_004078675.1| acyl-CoA synthetase [Mycobacterium gilvum Spyr1]
gi|315264099|gb|ADU00841.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
gilvum Spyr1]
Length = 538
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 93/174 (53%), Gaps = 39/174 (22%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD IV GTPGE RG+ MLGYW +++KT + I D W+ TG
Sbjct: 362 VEIKIVDPETGEIVERGTPGEFCTRGYSVMLGYWREDEKTAQAIDADGWMHTG------- 414
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R DGY +VGRIKD++IRGGENIYP
Sbjct: 415 ------------------------------DLAVMRPDGYCNIVGRIKDVVIRGGENIYP 444
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN-AKLNAYEDKSISSD 190
+EIEEF+ THP++ +A+ GVPD+R GEEV I+++ L+A + ++D
Sbjct: 445 REIEEFLYTHPDIEDAHVIGVPDDRYGEEVCAWIRMRPGRTALDAAAVREFATD 498
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y RE+E A + D V+R DGY +VGRIKD++IRGGENIYP+EIEEF+ T
Sbjct: 394 YWREDEKTAQAIDADGWMHTGDLAVMRPDGYCNIVGRIKDVVIRGGENIYPREIEEFLYT 453
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKEN-AKLNADDIRTFCKGKVSKF 485
HP++ +A+ GVPD+R GEEV I+++ L+A +R F K++ +
Sbjct: 454 HPDIEDAHVIGVPDDRYGEEVCAWIRMRPGRTALDAAAVREFATDKLAHY 503
>gi|407647404|ref|YP_006811163.1| AMP-binding domain protein [Nocardia brasiliensis ATCC 700358]
gi|407310288|gb|AFU04189.1| AMP-binding domain protein [Nocardia brasiliensis ATCC 700358]
Length = 541
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 85/161 (52%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP G PGEL RG+ MLGYW D KT E I RW+ TG
Sbjct: 361 LEVKIVDPATGLTVPRGEPGELCTRGYSVMLGYWSDPGKTAEAIDAARWMHTG------- 413
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ +DGY + GRIKDM+IRGGENIYP
Sbjct: 414 ------------------------------DIGVMDDDGYLAITGRIKDMVIRGGENIYP 443
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPD + GEE+ ++++E A
Sbjct: 444 REIEEFLYTHPDILDAQVIGVPDPKYGEELMAWVRMREGAA 484
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ +DGY + GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVP
Sbjct: 406 AARWMHTGDIGVMDDDGYLAITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVP 465
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
D + GEE+ ++++E A L+A +R FC GK++ F
Sbjct: 466 DPKYGEELMAWVRMREGAAPLDATSVREFCTGKLAHF 502
>gi|333023626|ref|ZP_08451690.1| putative AMP-binding domain protein [Streptomyces sp. Tu6071]
gi|332743478|gb|EGJ73919.1| putative AMP-binding domain protein [Streptomyces sp. Tu6071]
Length = 544
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 85/160 (53%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + + VP GT GEL RG+ MLGYWED ++T E + P RW+ TG
Sbjct: 369 LEVKVVDPVSGVTVPRGTQGELCTRGYSVMLGYWEDPERTAEVVDPGRWMHTG------- 421
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D ++REDGY ++ GRIKDMIIRGGENIYP
Sbjct: 422 ------------------------------DLALMREDGYVEIAGRIKDMIIRGGENIYP 451
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ THP + + GVPD R GE V + ++ A
Sbjct: 452 REIEEFLYTHPKISDVQVVGVPDARYGESVLACVIPRDPA 491
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
GR + D ++REDGY ++ GRIKDMIIRGGENIYP+EIEEF+ THP + + GVPD
Sbjct: 415 GRWMHTGDLALMREDGYVEIAGRIKDMIIRGGENIYPREIEEFLYTHPKISDVQVVGVPD 474
Query: 451 ERMGEEVGISIKLKENAKL-NADDIRTFCKGKVSKF 485
R GE V + ++ A D+IR FC+ +++ +
Sbjct: 475 ARYGESVLACVIPRDPADAPTLDEIRAFCRDRLASY 510
>gi|302522672|ref|ZP_07275014.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. SPB78]
gi|302431567|gb|EFL03383.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. SPB78]
Length = 538
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 85/160 (53%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + + VP GT GEL RG+ MLGYWED ++T E + P RW+ TG
Sbjct: 363 LEVKVVDPVSGVTVPRGTQGELCTRGYSVMLGYWEDPERTAEVVDPGRWMHTG------- 415
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D ++REDGY ++ GRIKDMIIRGGENIYP
Sbjct: 416 ------------------------------DLALMREDGYVEIAGRIKDMIIRGGENIYP 445
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ THP + + GVPD R GE V + ++ A
Sbjct: 446 REIEEFLYTHPKISDVQVVGVPDARYGESVLACVIPRDPA 485
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
GR + D ++REDGY ++ GRIKDMIIRGGENIYP+EIEEF+ THP + + GVPD
Sbjct: 409 GRWMHTGDLALMREDGYVEIAGRIKDMIIRGGENIYPREIEEFLYTHPKISDVQVVGVPD 468
Query: 451 ERMGEEVGISIKLKENAKL-NADDIRTFCKGKVSKF 485
R GE V + ++ A D+IR FC+ +++ +
Sbjct: 469 ARYGESVLACVIPRDPADAPTLDEIRAFCRDRLASY 504
>gi|47204854|emb|CAF92083.1| unnamed protein product [Tetraodon nigroviridis]
Length = 539
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 94/184 (51%), Gaps = 40/184 (21%)
Query: 8 DLQFSTLSS--SSFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPD 64
DL+ +T+ S +AKVVD VP GT GEL+IRG+C M GYW+D KT ETI
Sbjct: 317 DLKTNTVGCIMSHTEAKVVDPVTGETVPVGTSGELMIRGYCVMRGYWDDPVKTSETITDA 376
Query: 65 RWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRI 124
W +TG D L GY ++ GR+
Sbjct: 377 HWYKTG-------------------------------------DTASLNSLGYCRIEGRM 399
Query: 125 KDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
KDMIIRGGEN+YP E+E+F+ HP + EA+ GV DER+GE+V ++LK +A E
Sbjct: 400 KDMIIRGGENVYPAEVEQFLFKHPKIQEAHVVGVKDERLGEQVCACVRLKNGQSSSAEEI 459
Query: 185 KSIS 188
K+
Sbjct: 460 KAFC 463
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L GY ++ GR+KDMIIRGGEN+YP E+E+F+ HP + EA+ GV DER+GE+V
Sbjct: 383 DTASLNSLGYCRIEGRMKDMIIRGGENVYPAEVEQFLFKHPKIQEAHVVGVKDERLGEQV 442
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++LK +A++I+ FCKG++S F
Sbjct: 443 CACVRLKNGQSSSAEEIKAFCKGQISHF 470
>gi|449479413|ref|XP_004176398.1| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA synthetase family member
2, mitochondrial [Taeniopygia guttata]
Length = 661
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 84/170 (49%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+ D + VP PGEL IRG+C MLGYW D KT + I +RW +TG
Sbjct: 487 EAKIEDPETGQSVPLNAPGELQIRGYCVMLGYWNDPAKTSDVITAERWYKTG-------- 538
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L E GY +++GR KDMIIRGGENIYP
Sbjct: 539 -----------------------------DLATLNEHGYCRIIGRCKDMIIRGGENIYPS 569
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F+ THP V E GV D RMGEE+ I+L+ + E K+
Sbjct: 570 ELEQFLHTHPKVEEVQVVGVKDSRMGEEICACIRLRAGQDCSEEEIKAFC 619
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E GY +++GR KDMIIRGGENIYP E+E+F+ THP V E GV D RMGEE+
Sbjct: 539 DLATLNEHGYCRIIGRCKDMIIRGGENIYPSELEQFLHTHPKVEEVQVVGVKDSRMGEEI 598
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+L+ + ++I+ FCKGK+S F
Sbjct: 599 CACIRLRAGQDCSEEEIKAFCKGKISHF 626
>gi|170728362|ref|YP_001762388.1| AMP-dependent synthetase and ligase [Shewanella woodyi ATCC 51908]
gi|169813709|gb|ACA88293.1| AMP-dependent synthetase and ligase [Shewanella woodyi ATCC 51908]
Length = 558
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 86/173 (49%), Gaps = 37/173 (21%)
Query: 18 SFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+V+ N VP G GE+ IRG+ M GYWEDEQKTKETI D WL +G
Sbjct: 385 GLEVKLVNQNGETVPIGVEGEICIRGYAVMKGYWEDEQKTKETISQDGWLHSG------- 437
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + D Y +V GR+KDMIIRGGENIYP
Sbjct: 438 ------------------------------DLGEMDNDNYLKVTGRMKDMIIRGGENIYP 467
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
+EIE F+ THP +L+ +G+ D++ GE V I K++ L E + D
Sbjct: 468 REIENFLYTHPTILDVQVFGIKDDKYGESVCAWIICKKDRSLTVQEVQDFCKD 520
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 71/129 (55%), Gaps = 3/129 (2%)
Query: 360 TWPNSMDSEARIYHY---KKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKD 416
T P ++ E I Y K Y +E+ S + D + D Y +V GR+KD
Sbjct: 397 TVPIGVEGEICIRGYAVMKGYWEDEQKTKETISQDGWLHSGDLGEMDNDNYLKVTGRMKD 456
Query: 417 MIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRT 476
MIIRGGENIYP+EIE F+ THP +L+ +G+ D++ GE V I K++ L +++
Sbjct: 457 MIIRGGENIYPREIENFLYTHPTILDVQVFGIKDDKYGESVCAWIICKKDRSLTVQEVQD 516
Query: 477 FCKGKVSKF 485
FCK +S F
Sbjct: 517 FCKDSISHF 525
>gi|386358405|ref|YP_006056651.1| acyl-CoA synthetase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365808913|gb|AEW97129.1| acyl-CoA synthetase [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 570
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 84/167 (50%), Gaps = 38/167 (22%)
Query: 19 FQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ +V D VP G PGEL RG+ MLGYWED ++T E I D W+ TG
Sbjct: 389 LEVRVADPVTGETVPRGVPGELRTRGYSVMLGYWEDPERTAEVIDGDGWMHTG------- 441
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY + GRIKDMIIRGGEN+YP
Sbjct: 442 ------------------------------DLAVMREDGYLTITGRIKDMIIRGGENVYP 471
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
+EIEEF+ THP + + GVPDER GEEV + ++ A E+
Sbjct: 472 REIEEFLHTHPKIADVQVVGVPDERYGEEVLACVIPRDPADPPTLEE 518
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 6/131 (4%)
Query: 360 TWPNSMDSEARIYHYKKYLR----EEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIK 415
T P + E R Y L E V D G + D V+REDGY + GRIK
Sbjct: 401 TVPRGVPGELRTRGYSVMLGYWEDPERTAEVIDGDG-WMHTGDLAVMREDGYLTITGRIK 459
Query: 416 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNADDI 474
DMIIRGGEN+YP+EIEEF+ THP + + GVPDER GEEV + ++ A +++
Sbjct: 460 DMIIRGGENVYPREIEEFLHTHPKIADVQVVGVPDERYGEEVLACVIPRDPADPPTLEEV 519
Query: 475 RTFCKGKVSKF 485
C+G+++ F
Sbjct: 520 TAHCRGRLAHF 530
>gi|453069337|ref|ZP_21972599.1| AMP-binding domain protein [Rhodococcus qingshengii BKS 20-40]
gi|452763636|gb|EME21916.1| AMP-binding domain protein [Rhodococcus qingshengii BKS 20-40]
Length = 529
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 87/160 (54%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP G PGEL RG+ MLGYWE+ +KT E I RW+ TG
Sbjct: 352 LEIKIVDPATGLTVPRGEPGELCTRGYSVMLGYWENPEKTAEAIDAARWMHTG------- 404
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ E GY + GRIKDM+IRGGEN+YP
Sbjct: 405 ------------------------------DIGVMDEAGYVAITGRIKDMVIRGGENVYP 434
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ THP++L+A GVPD + GEE+ + ++++E A
Sbjct: 435 REIEEFLYTHPDILDAQVIGVPDAKYGEELMVWVQMREGA 474
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ E GY + GRIKDM+IRGGEN+YP+EIEEF+ THP++L+A GVP
Sbjct: 397 AARWMHTGDIGVMDEAGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVP 456
Query: 450 DERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
D + GEE+ + ++++E A L+AD +R FC GK++ +
Sbjct: 457 DAKYGEELMVWVQMREGADDLDADSVRAFCTGKLAHY 493
>gi|383830174|ref|ZP_09985263.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora xinjiangensis XJ-54]
gi|383462827|gb|EID54917.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora xinjiangensis XJ-54]
Length = 560
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 87/161 (54%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP GTPGEL RG+ MLGYW +KT E I RW+ TG
Sbjct: 367 LEVKIVDPETGLTVPRGTPGELCTRGYSVMLGYWNQPEKTAEVIDAARWMHTG------- 419
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ +DGY + GRIKDM+IRGGENIYP
Sbjct: 420 ------------------------------DVAVMDDDGYVTITGRIKDMVIRGGENIYP 449
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPD + GEE+ +++++ A+
Sbjct: 450 REIEEFLYTHPDILDAQVIGVPDAKYGEELMAWVRMRDGAE 490
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 83/135 (61%), Gaps = 6/135 (4%)
Query: 356 KVALTWPNSMDSEARIYHYKKYL----REEENITVPDSAGRSIFEKDQFVLREDGYGQVV 411
+ LT P E Y L + E+ V D+A R + D V+ +DGY +
Sbjct: 375 ETGLTVPRGTPGELCTRGYSVMLGYWNQPEKTAEVIDAA-RWMHTGDVAVMDDDGYVTIT 433
Query: 412 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LN 470
GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPD + GEE+ +++++ A+ +
Sbjct: 434 GRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDAKYGEELMAWVRMRDGAEPIT 493
Query: 471 ADDIRTFCKGKVSKF 485
A+ +R FC G+++ F
Sbjct: 494 AEALRAFCTGRLAHF 508
>gi|357402331|ref|YP_004914256.1| Acyl-CoA synthetase member 2 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337768740|emb|CCB77453.1| Acyl-CoA synthetase family member 2, mitochondrial [Streptomyces
cattleya NRRL 8057 = DSM 46488]
Length = 544
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 85/169 (50%), Gaps = 38/169 (22%)
Query: 19 FQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ +V D VP G PGEL RG+ MLGYWED ++T E I D W+ TG
Sbjct: 363 LEVRVADPVTGETVPRGVPGELRTRGYSVMLGYWEDPERTAEVIDGDGWMHTG------- 415
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY + GRIKDMIIRGGEN+YP
Sbjct: 416 ------------------------------DLAVMREDGYLTITGRIKDMIIRGGENVYP 445
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
+EIEEF+ THP + + GVPDER GEEV + ++ A E+ +
Sbjct: 446 REIEEFLHTHPKIADVQVVGVPDERYGEEVLACVIPRDPADPPTLEEVT 494
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 6/131 (4%)
Query: 360 TWPNSMDSEARIYHYKKYLR----EEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIK 415
T P + E R Y L E V D G + D V+REDGY + GRIK
Sbjct: 375 TVPRGVPGELRTRGYSVMLGYWEDPERTAEVIDGDG-WMHTGDLAVMREDGYLTITGRIK 433
Query: 416 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNADDI 474
DMIIRGGEN+YP+EIEEF+ THP + + GVPDER GEEV + ++ A +++
Sbjct: 434 DMIIRGGENVYPREIEEFLHTHPKIADVQVVGVPDERYGEEVLACVIPRDPADPPTLEEV 493
Query: 475 RTFCKGKVSKF 485
C+G+++ F
Sbjct: 494 TAHCRGRLAHF 504
>gi|374985715|ref|YP_004961210.1| AMP-binding protein [Streptomyces bingchenggensis BCW-1]
gi|297156367|gb|ADI06079.1| AMP-binding domain protein [Streptomyces bingchenggensis BCW-1]
Length = 575
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 86/161 (53%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + VP GT GEL RG+ MLGYWE+ ++T E I RW+ TG
Sbjct: 380 LEIKVVDPLTGVTVPRGTRGELCTRGYSVMLGYWEEPERTAEVIDGGRWMHTG------- 432
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D ++ EDGY ++VGRIKDMIIRGGE +YP
Sbjct: 433 ------------------------------DLAIMDEDGYVRIVGRIKDMIIRGGEKVYP 462
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP + + GVPDE+ GEE+ + L+E AK
Sbjct: 463 REIEEFLYTHPKIADVQVVGVPDEKYGEEILACVILREGAK 503
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E GR + D ++ EDGY ++VGRIKDMIIRGGE +YP+EIEEF+ T
Sbjct: 412 YWEEPERTAEVIDGGRWMHTGDLAIMDEDGYVRIVGRIKDMIIRGGEKVYPREIEEFLYT 471
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
HP + + GVPDE+ GEE+ + L+E AK L D++ FC+G+++ +
Sbjct: 472 HPKIADVQVVGVPDEKYGEEILACVILREGAKSLTRDELARFCRGRLAHY 521
>gi|229490610|ref|ZP_04384448.1| acyl-CoA synthetase family member 2 [Rhodococcus erythropolis
SK121]
gi|226184422|dbj|BAH32526.1| putative fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
gi|229322430|gb|EEN88213.1| acyl-CoA synthetase family member 2 [Rhodococcus erythropolis
SK121]
Length = 545
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 87/160 (54%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP G PGEL RG+ MLGYWE+ +KT E I RW+ TG
Sbjct: 368 LEIKIVDPATGLTVPRGEPGELCTRGYSVMLGYWENPEKTAEAIDAARWMHTG------- 420
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ E GY + GRIKDM+IRGGEN+YP
Sbjct: 421 ------------------------------DIGVMDEAGYVAITGRIKDMVIRGGENVYP 450
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ THP++L+A GVPD + GEE+ + ++++E A
Sbjct: 451 REIEEFLYTHPDILDAQVIGVPDAKYGEELMVWVQMREGA 490
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ E GY + GRIKDM+IRGGEN+YP+EIEEF+ THP++L+A GVP
Sbjct: 413 AARWMHTGDIGVMDEAGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVP 472
Query: 450 DERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
D + GEE+ + ++++E A L+AD +R FC GK++ +
Sbjct: 473 DAKYGEELMVWVQMREGADDLDADSVRAFCTGKLAHY 509
>gi|418461131|ref|ZP_13032210.1| AMP-binding domain protein [Saccharomonospora azurea SZMC 14600]
gi|359738785|gb|EHK87666.1| AMP-binding domain protein [Saccharomonospora azurea SZMC 14600]
Length = 547
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 88/161 (54%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + VP GTPGEL RG+ MLGYWE +KT E I RW+ TG
Sbjct: 366 LEVKVVDPETGLTVPRGTPGELCTRGYSVMLGYWEQPEKTAEVIDAARWMHTG------- 418
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ +DGY + GRIKD++IRGGEN+YP
Sbjct: 419 ------------------------------DLAVMDDDGYLSITGRIKDLVIRGGENVYP 448
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ +HP++L+A GVPD + GEE+ +++++ A+
Sbjct: 449 REIEEFLYSHPDILDAQVIGVPDAKYGEELMAWVRMRDGAE 489
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 83/135 (61%), Gaps = 6/135 (4%)
Query: 356 KVALTWPNSMDSEARIYHYKKYL----REEENITVPDSAGRSIFEKDQFVLREDGYGQVV 411
+ LT P E Y L + E+ V D+A R + D V+ +DGY +
Sbjct: 374 ETGLTVPRGTPGELCTRGYSVMLGYWEQPEKTAEVIDAA-RWMHTGDLAVMDDDGYLSIT 432
Query: 412 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LN 470
GRIKD++IRGGEN+YP+EIEEF+ +HP++L+A GVPD + GEE+ +++++ A+ +
Sbjct: 433 GRIKDLVIRGGENVYPREIEEFLYSHPDILDAQVIGVPDAKYGEELMAWVRMRDGAEPVT 492
Query: 471 ADDIRTFCKGKVSKF 485
A+ +R FC G+++ +
Sbjct: 493 AESLREFCTGRLAHY 507
>gi|198418450|ref|XP_002124320.1| PREDICTED: similar to acyl-CoA synthetase family member 2 [Ciona
intestinalis]
Length = 610
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 99/187 (52%), Gaps = 39/187 (20%)
Query: 1 MWDMNPTDLQFSTLSSS--SFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTK 58
M+ +P + + +T+ + + + ++VD +IVP T GE+ RG+C M+GYW D++KT
Sbjct: 416 MFRNDPDEKRTTTVGKALANTENRIVDVAGKIVPVNTAGEVQSRGYCVMVGYWNDKEKTA 475
Query: 59 ETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYG 118
E I W TG D + E+GY
Sbjct: 476 EAIDDQGWYHTG-------------------------------------DIGEMDEEGYV 498
Query: 119 QVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+V+GRIKDMIIRGGEN+YP E+E+F+ THP + + G+PD+R+GEEV I++KE K
Sbjct: 499 RVIGRIKDMIIRGGENVYPTEVEDFLHTHPKIDDVQVIGLPDKRLGEEVAAWIRVKEGEK 558
Query: 179 LNAYEDK 185
L E K
Sbjct: 559 LTEKEIK 565
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 64/84 (76%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ E+GY +V+GRIKDMIIRGGEN+YP E+E+F+ THP + + G+PD+R+GEEV I
Sbjct: 492 MDEEGYVRVIGRIKDMIIRGGENVYPTEVEDFLHTHPKIDDVQVIGLPDKRLGEEVAAWI 551
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
++KE KL +I+ +CKGK+S F
Sbjct: 552 RVKEGEKLTEKEIKEYCKGKISHF 575
>gi|379059581|ref|ZP_09850107.1| AMP-binding domain protein [Serinicoccus profundi MCCC 1A05965]
Length = 543
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 97/177 (54%), Gaps = 41/177 (23%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNR-IVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P D + T+ + ++VD R +VP GTPGE +G+ MLGYW++ +KT E +
Sbjct: 351 DPFDAKVGTVGRVMPHLEIQIVDPATREVVPRGTPGEFCTKGYSVMLGYWDEPEKTAEVL 410
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ TG D V+ EDGY ++
Sbjct: 411 -QDGWMATG-------------------------------------DIGVMDEDGYVEIT 432
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
GRIKD+IIRGGEN+YP+E+EEF+ THP+V++A GVPDER GEE+ ++L+E A+
Sbjct: 433 GRIKDLIIRGGENVYPREVEEFLYTHPDVVDAQVVGVPDERYGEELMAWVRLREGAE 489
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDGY ++ GRIKD+IIRGGEN+YP+E+EEF+ THP+V++A GVPDER GEE+
Sbjct: 419 DIGVMDEDGYVEITGRIKDLIIRGGENVYPREVEEFLYTHPDVVDAQVVGVPDERYGEEL 478
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSKF 485
++L+E A+ L A+ ++ FC G ++ +
Sbjct: 479 MAWVRLREGAEPLTAEAVKDFCTGSLAHY 507
>gi|335419331|ref|ZP_08550386.1| AMP-binding domain protein [Salinisphaera shabanensis E1L3A]
gi|335420996|ref|ZP_08552026.1| AMP-binding domain protein [Salinisphaera shabanensis E1L3A]
gi|334893170|gb|EGM31388.1| AMP-binding domain protein [Salinisphaera shabanensis E1L3A]
gi|334896948|gb|EGM35090.1| AMP-binding domain protein [Salinisphaera shabanensis E1L3A]
Length = 566
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 90/175 (51%), Gaps = 42/175 (24%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD + R+VP G PGE RG+ MLGYW+D +++ E I RW+ TG
Sbjct: 384 LEIKIVDIDGRVVPRGEPGEYCTRGYSVMLGYWDDAERSAEAIDSARWMHTG-------- 435
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E GY ++VGR+KDM+IRGGENIYP+
Sbjct: 436 -----------------------------DLAVMDEAGYCRIVGRLKDMVIRGGENIYPR 466
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK-----ENAKLNAYEDKSIS 188
EIEE++ HP V + GVPD R GEE+ ++L + A L A+ D I+
Sbjct: 467 EIEEYLYRHPAVADVQVVGVPDARYGEELCAWVQLAAGETLDEAALRAFCDGEIA 521
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 388 DSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYG 447
DSA R + D V+ E GY ++VGR+KDM+IRGGENIYP+EIEE++ HP V + G
Sbjct: 427 DSA-RWMHTGDLAVMDEAGYCRIVGRLKDMVIRGGENIYPREIEEYLYRHPAVADVQVVG 485
Query: 448 VPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
VPD R GEE+ ++L L+ +R FC G+++ +
Sbjct: 486 VPDARYGEELCAWVQLAAGETLDEAALRAFCDGEIAHY 523
>gi|197099966|ref|NP_001125938.1| acyl-CoA synthetase family member 2, mitochondrial precursor [Pongo
abelii]
gi|75061807|sp|Q5R9G9.1|ACSF2_PONAB RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|55729725|emb|CAH91591.1| hypothetical protein [Pongo abelii]
Length = 615
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 80/156 (51%), Gaps = 37/156 (23%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
TPGEL IRG+C MLGYW + QKT+E + D+W RTG
Sbjct: 455 LNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYRTG---------------------- 492
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E
Sbjct: 493 ---------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQE 537
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
GV D+RMGEE+ I+LK+ + E K+
Sbjct: 538 VQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 573
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 493 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 553 CACIRLKDGEETTVEEIKAFCKGKISHF 580
>gi|374607766|ref|ZP_09680566.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
gi|373554328|gb|EHP80907.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
Length = 542
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 85/157 (54%), Gaps = 38/157 (24%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD +V G GE RG+ M+GYWEDE KT E+I D W+ TG
Sbjct: 361 VEIKIVDAETGEVVERGQTGEFCTRGYSVMIGYWEDEAKTAESIDDDGWMHTG------- 413
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R+DGY +VGRIKDM+IRGGENIYP
Sbjct: 414 ------------------------------DLAVMRDDGYCNIVGRIKDMVIRGGENIYP 443
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
+EIEEF+ THP+V +A GVPDE+ GEE+ +++K
Sbjct: 444 REIEEFLYTHPDVDDAQVIGVPDEKYGEEICAWVRMK 480
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+R+DGY +VGRIKDM+IRGGENIYP+EIEEF+ THP+V +A GVPDE+ GEE+
Sbjct: 414 DLAVMRDDGYCNIVGRIKDMVIRGGENIYPREIEEFLYTHPDVDDAQVIGVPDEKYGEEI 473
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSKF 485
+++K ++A +R F GK++ +
Sbjct: 474 CAWVRMKPGKGPVDARALRDFATGKLAHY 502
>gi|408826805|ref|ZP_11211695.1| AMP-binding domain protein [Streptomyces somaliensis DSM 40738]
Length = 541
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 88/167 (52%), Gaps = 38/167 (22%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + +P G GEL RG+ MLGYW++ ++T E + RW+ TG
Sbjct: 366 VEVKVVDPASGTTLPRGEAGELCTRGYGVMLGYWDEPERTAEAVDRGRWMHTG------- 418
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY Q+VGRIKDMIIRGGEN+YP
Sbjct: 419 ------------------------------DLAVMREDGYLQIVGRIKDMIIRGGENVYP 448
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
+EIEEF+ +HP V + GVPDER GEEV + ++ A YE+
Sbjct: 449 REIEEFLYSHPKVADVQVVGVPDERYGEEVLACVIPRDPADPPTYEE 495
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
GR + D V+REDGY Q+VGRIKDMIIRGGEN+YP+EIEEF+ +HP V + GVPD
Sbjct: 412 GRWMHTGDLAVMREDGYLQIVGRIKDMIIRGGENVYPREIEEFLYSHPKVADVQVVGVPD 471
Query: 451 ERMGEEVGISIKLKENAKLNA-DDIRTFCKGKVSKF 485
ER GEEV + ++ A ++I +C+ +++ +
Sbjct: 472 ERYGEEVLACVIPRDPADPPTYEEIAAYCRDRLAHY 507
>gi|375097374|ref|ZP_09743639.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
gi|374658107|gb|EHR52940.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
Length = 550
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 86/160 (53%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP GTPGE RG+ MLGYWE ++T + I RW+ TG
Sbjct: 367 LEVKIVDPETGLTVPRGTPGEFCTRGYSVMLGYWEQPEQTADAIDAARWMHTG------- 419
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ ++GY + GRIKDM+IRGGENIYP
Sbjct: 420 ------------------------------DLAVMDDEGYVNITGRIKDMVIRGGENIYP 449
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ THP+VL+A GVPD R GEE+ ++++E A
Sbjct: 450 REIEEFLYTHPDVLDAQVIGVPDRRYGEELMAWVRMREGA 489
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ ++GY + GRIKDM+IRGGENIYP+EIEEF+ THP+VL+A GVP
Sbjct: 412 AARWMHTGDLAVMDDEGYVNITGRIKDMVIRGGENIYPREIEEFLYTHPDVLDAQVIGVP 471
Query: 450 DERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
D R GEE+ ++++E A L A+ +R FC+G+++ +
Sbjct: 472 DRRYGEELMAWVRMREGAPPLTAEALREFCQGRLAHY 508
>gi|404442480|ref|ZP_11007659.1| AMP-binding domain protein [Mycobacterium vaccae ATCC 25954]
gi|403657052|gb|EJZ11842.1| AMP-binding domain protein [Mycobacterium vaccae ATCC 25954]
Length = 545
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 88/165 (53%), Gaps = 39/165 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD IV G GE RG+ MLGYW+D+ KT+E + D W+ TG
Sbjct: 362 VEVKIVDPETGEIVERGAAGEFCTRGYSVMLGYWDDDDKTREAVDADGWMHTG------- 414
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R DGY +VGRIKD++IRGGENIYP
Sbjct: 415 ------------------------------DLAVMRPDGYCNIVGRIKDVVIRGGENIYP 444
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN-AKLNA 181
+EIEEF+ THP++ +A GVPDER GEEV I+++ A L+A
Sbjct: 445 REIEEFLYTHPDIEDAQVIGVPDERYGEEVCAWIRMRPGRAALDA 489
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+R DGY +VGRIKD++IRGGENIYP+EIEEF+ THP++ +A GVPDER GEEV
Sbjct: 415 DLAVMRPDGYCNIVGRIKDVVIRGGENIYPREIEEFLYTHPDIEDAQVIGVPDERYGEEV 474
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSKF 485
I+++ A L+AD +R F GK++ +
Sbjct: 475 CAWIRMRPGRAALDADAVREFAAGKLAHY 503
>gi|184201926|ref|YP_001856133.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
gi|183582156|dbj|BAG30627.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
Length = 540
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 86/160 (53%), Gaps = 38/160 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD VP G GE RG+ M GYW E+KT+E I P+ WL TG
Sbjct: 362 VEVKIVDPSTGETVPRGQAGEFCTRGYSVMKGYWGQEEKTREAIDPEGWLHTG------- 414
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ EDGY Q+ GRIKDM+IRGGENIYP
Sbjct: 415 ------------------------------DIAVMDEDGYAQITGRIKDMVIRGGENIYP 444
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+E+EEF+ THP+V++A GVP E+ GEE+ + ++L++ A
Sbjct: 445 REVEEFLYTHPDVVDAQVIGVPSEKYGEELMVWLRLRDGA 484
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDGY Q+ GRIKDM+IRGGENIYP+E+EEF+ THP+V++A GVP E+ GEE+
Sbjct: 415 DIAVMDEDGYAQITGRIKDMVIRGGENIYPREVEEFLYTHPDVVDAQVIGVPSEKYGEEL 474
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSK 484
+ ++L++ A L A+ I F GK+S+
Sbjct: 475 MVWLRLRDGAPALTAEAILEFADGKISR 502
>gi|300790301|ref|YP_003770592.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|384153828|ref|YP_005536644.1| AMP-binding protein [Amycolatopsis mediterranei S699]
gi|399542181|ref|YP_006554843.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
gi|299799815|gb|ADJ50190.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|340531982|gb|AEK47187.1| AMP-binding domain protein [Amycolatopsis mediterranei S699]
gi|398322951|gb|AFO81898.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
Length = 552
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 85/161 (52%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + VP G PGEL RG+ MLGYWE KT E I RW+ TG
Sbjct: 367 LEVKVVDPETGLTVPRGEPGELCTRGYSVMLGYWEQPDKTAEAIDAARWMHTG------- 419
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ DGY + GRIKDM+IRGGEN+YP
Sbjct: 420 ------------------------------DLAVMDGDGYVNITGRIKDMVIRGGENLYP 449
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPDE+ GEE+ +++++ A
Sbjct: 450 REIEEFLYTHPDILDAQVIGVPDEKYGEELMAWVRMRQGAS 490
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ DGY + GRIKDM+IRGGEN+YP+EIEEF+ THP++L+A GVP
Sbjct: 412 AARWMHTGDLAVMDGDGYVNITGRIKDMVIRGGENLYPREIEEFLYTHPDILDAQVIGVP 471
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
DE+ GEE+ +++++ A L A+ +R FC GK++ +
Sbjct: 472 DEKYGEELMAWVRMRQGASPLTAEKVREFCSGKLAHY 508
>gi|403508875|ref|YP_006640513.1| AMP-binding enzyme family protein [Nocardiopsis alba ATCC BAA-2165]
gi|402799440|gb|AFR06850.1| AMP-binding enzyme family protein [Nocardiopsis alba ATCC BAA-2165]
Length = 542
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 87/161 (54%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KV+D + VP GTPGEL RG+ MLGYW + KT E I RW+ TG
Sbjct: 367 LEVKVIDPATGVTVPRGTPGELCTRGYSVMLGYWNEPDKTAEVIDRGRWMHTG------- 419
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ EDGY + GRIKDM+IRGGENIYP
Sbjct: 420 ------------------------------DLAVMDEDGYVGITGRIKDMVIRGGENIYP 449
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEE + THP++L+A GVPD++ GEE+ ++++E A+
Sbjct: 450 REIEEVLYTHPDLLDAQVIGVPDQKYGEELMAWVRMREGAE 490
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
GR + D V+ EDGY + GRIKDM+IRGGENIYP+EIEE + THP++L+A GVPD
Sbjct: 413 GRWMHTGDLAVMDEDGYVGITGRIKDMVIRGGENIYPREIEEVLYTHPDLLDAQVIGVPD 472
Query: 451 ERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
++ GEE+ ++++E A+ L + +R FC+G+++ F
Sbjct: 473 QKYGEELMAWVRMREGAEPLTPETLRAFCQGRIAHF 508
>gi|258654979|ref|YP_003204135.1| AMP-binding domain-containing protein [Nakamurella multipartita DSM
44233]
gi|258558204|gb|ACV81146.1| AMP-dependent synthetase and ligase [Nakamurella multipartita DSM
44233]
Length = 549
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 89/179 (49%), Gaps = 44/179 (24%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KV+D R +P G PGEL RG+ MLGYW++ KT + I RW+ TG
Sbjct: 364 VEVKVIDPATGRTLPRGEPGELCTRGYSVMLGYWDEPDKTAQAIDAARWMHTG------- 416
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + ++GY + GRIKDM+IRGGENIYP
Sbjct: 417 ------------------------------DLAAMDDEGYLTITGRIKDMVIRGGENIYP 446
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDYHEFET 196
+EIEEF+ THP+VL+A GVPD+R GEE+ I ++ A E HEF T
Sbjct: 447 REIEEFLHTHPDVLDAQVVGVPDQRYGEELCAWITMRAGAPALTAE------AVHEFAT 499
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D + ++GY + GRIKDM+IRGGENIYP+EIEEF+ THP+VL+A GVP
Sbjct: 409 AARWMHTGDLAAMDDEGYLTITGRIKDMVIRGGENIYPREIEEFLHTHPDVLDAQVVGVP 468
Query: 450 DERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
D+R GEE+ I ++ A L A+ + F G+++ F
Sbjct: 469 DQRYGEELCAWITMRAGAPALTAEAVHEFATGRLAHF 505
>gi|407685098|ref|YP_006800272.1| AMP-binding protein [Alteromonas macleodii str. 'English Channel
673']
gi|407246709|gb|AFT75895.1| AMP-binding domain protein [Alteromonas macleodii str. 'English
Channel 673']
Length = 579
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 85/161 (52%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D VP G PGE+ RG+C M GYW DE KTK TI + WL +G
Sbjct: 399 EVKIIDPQGNTVPIGEPGEICARGYCVMKGYWGDEVKTKATIDDEGWLHSG--------- 449
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + E+GY +VGRIKDMIIRGGENIYP+E
Sbjct: 450 ----------------------------DLGEMDEEGYVTIVGRIKDMIIRGGENIYPRE 481
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + H +V +A +G+PD + GE+V + IK KEN ++
Sbjct: 482 IEEVLYQHADVSDAAVFGIPDNKYGEQVCLWIKAKENRHID 522
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 61/84 (72%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ E+GY +VGRIKDMIIRGGENIYP+EIEE + H +V +A +G+PD + GE+V + I
Sbjct: 454 MDEEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHADVSDAAVFGIPDNKYGEQVCLWI 513
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
K KEN ++ D IR + K K++ F
Sbjct: 514 KAKENRHIDEDQIRDYLKSKLAYF 537
>gi|440910486|gb|ELR60280.1| Acyl-CoA synthetase family member 2, mitochondrial [Bos grunniens
mutus]
Length = 635
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 90/170 (52%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ + TPGEL IRG+C MLGYW + QKT+E IG D+W RTG
Sbjct: 461 EAQIVNTETGTLTELNTPGELCIRGYCVMLGYWGEPQKTEEAIGQDKWYRTG-------- 512
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D ++ E G+ ++VGR KDMIIRGGENIYP
Sbjct: 513 -----------------------------DIAMMDEQGFCKIVGRSKDMIIRGGENIYPA 543
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F THP V E GV D+RMGEE+ I+LKE K A E K+
Sbjct: 544 ELEDFFHTHPQVQEVQVVGVKDDRMGEEICACIRLKEGEKTTAEEIKAFC 593
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 513 DIAMMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDDRMGEEI 572
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LKE K A++I+ FCKGK+S F
Sbjct: 573 CACIRLKEGEKTTAEEIKAFCKGKISHF 600
>gi|328712423|ref|XP_001947925.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Acyrthosiphon pisum]
Length = 580
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 88/161 (54%), Gaps = 38/161 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ KVVD N VP G PGE+ +G+ M GYW DE+ TK+ I D WLR+G
Sbjct: 403 EVKVVDKNGITVPMGRPGEVWFKGYNVMPGYWNDEEMTKKAID-DGWLRSG--------- 452
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D +L EDGYG V GRIKD+IIRGGENI P+
Sbjct: 453 ----------------------------DILILNEDGYGVVTGRIKDIIIRGGENIQPQA 484
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE F+++HP +++A +G+PDER+GE V +I + + + ++
Sbjct: 485 IEYFLESHPEIIQAQVFGIPDERLGEVVCAAITITKGSTVD 525
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 65/88 (73%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D +L EDGYG V GRIKD+IIRGGENI P+ IE F+++HP +++A +G+PDER+GE V
Sbjct: 453 DILILNEDGYGVVTGRIKDIIIRGGENIQPQAIEYFLESHPEIIQAQVFGIPDERLGEVV 512
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+I + + + ++ + ++ +C G +++F
Sbjct: 513 CAAITITKGSTVDEETVKNYCNGNIARF 540
>gi|118151292|ref|NP_001071580.1| acyl-CoA synthetase family member 2, mitochondrial precursor [Bos
taurus]
gi|122142559|sp|Q17QJ1.1|ACSF2_BOVIN RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|109658304|gb|AAI18332.1| Hypothetical protein LOC768237 [Bos taurus]
gi|296476507|tpg|DAA18622.1| TPA: acyl-CoA synthetase family member 2, mitochondrial precursor
[Bos taurus]
Length = 615
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 90/170 (52%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ + TPGEL IRG+C MLGYW + QKT+E IG D+W RTG
Sbjct: 441 EAQIVNTETGTLTELNTPGELCIRGYCVMLGYWGEPQKTEEAIGQDKWYRTG-------- 492
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D ++ E G+ ++VGR KDMIIRGGENIYP
Sbjct: 493 -----------------------------DIAMMDEQGFCKIVGRSKDMIIRGGENIYPA 523
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F THP V E GV D+RMGEE+ I+LKE K A E K+
Sbjct: 524 ELEDFFHTHPQVQEVQVVGVKDDRMGEEICACIRLKEGEKTTAEEIKAFC 573
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 493 DIAMMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDDRMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LKE K A++I+ FCKGK+S F
Sbjct: 553 CACIRLKEGEKTTAEEIKAFCKGKISHF 580
>gi|407689016|ref|YP_006804189.1| AMP-binding protein [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|407292396|gb|AFT96708.1| AMP-binding domain protein [Alteromonas macleodii str. 'Balearic
Sea AD45']
Length = 579
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 85/161 (52%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D VP G PGE+ RG+C M GYW DE KTK TI + WL +G
Sbjct: 399 EVKIIDPQGNTVPIGEPGEICARGYCVMKGYWGDEIKTKATIDDEGWLHSG--------- 449
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + E+GY +VGRIKDMIIRGGENIYP+E
Sbjct: 450 ----------------------------DLGEMDEEGYVTIVGRIKDMIIRGGENIYPRE 481
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + H +V +A +G+PD + GE+V + IK KEN ++
Sbjct: 482 IEEVLYQHADVSDAAVFGIPDNKYGEQVCLWIKAKENRHID 522
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 61/84 (72%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ E+GY +VGRIKDMIIRGGENIYP+EIEE + H +V +A +G+PD + GE+V + I
Sbjct: 454 MDEEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHADVSDAAVFGIPDNKYGEQVCLWI 513
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
K KEN ++ D IR + K K++ F
Sbjct: 514 KAKENRHIDEDQIRDYLKSKLAYF 537
>gi|167721819|ref|ZP_02405055.1| acyl-CoA synthetase [Burkholderia pseudomallei DM98]
Length = 576
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 86/171 (50%), Gaps = 38/171 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD IVP G GEL RG+ MLGYW+DE +T+E + D W+RTG
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDDEARTREAV-VDGWMRTG-------- 447
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L E+G+ +VGR+KDM+IRGGEN+YP+
Sbjct: 448 -----------------------------DLATLDEEGFCNIVGRLKDMLIRGGENVYPR 478
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIEEF+ HP + +GVPD + GEEV I L+ + E + S
Sbjct: 479 EIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRAGETMTDDELREFCS 529
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + D++R FC G+++ +
Sbjct: 508 CAWIVLRAGETMTDDELREFCSGQIAHY 535
>gi|134097188|ref|YP_001102849.1| AMP-binding protein [Saccharopolyspora erythraea NRRL 2338]
gi|291005355|ref|ZP_06563328.1| AMP-binding domain protein [Saccharopolyspora erythraea NRRL 2338]
gi|133909811|emb|CAL99923.1| AMP-dependent synthetase and ligase [Saccharopolyspora erythraea
NRRL 2338]
Length = 538
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 83/160 (51%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP G PGEL RG+ MLGYWE KT E I RW+ TG
Sbjct: 360 LEVKIVDPATGLTVPRGEPGELCTRGYSVMLGYWEQADKTAEVIDAARWMHTG------- 412
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ D Y + GRIKDM+IRGGENIYP
Sbjct: 413 ------------------------------DLAVMDADDYVGITGRIKDMVIRGGENIYP 442
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ THP++L+A GVPD R GEE+ ++L+E A
Sbjct: 443 REIEEFLYTHPDILDAQVVGVPDARYGEELMAWVRLREGA 482
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ D Y + GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVP
Sbjct: 405 AARWMHTGDLAVMDADDYVGITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVVGVP 464
Query: 450 DERMGEEVGISIKLKEN-AKLNADDIRTFCKGKVSKF 485
D R GEE+ ++L+E A+L + +R FC GK++ +
Sbjct: 465 DARYGEELMAWVRLREGAAELTVEALREFCTGKLAHY 501
>gi|94309555|ref|YP_582765.1| AMP-binding domain protein [Cupriavidus metallidurans CH34]
gi|93353407|gb|ABF07496.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Cupriavidus
metallidurans CH34]
Length = 570
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 90/172 (52%), Gaps = 40/172 (23%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + ST+ + KVVD + + +P G GEL RG+ MLGYW+DE++T+E I
Sbjct: 376 DPIDKRVSTVGRVQPHLECKVVDVDGQTLPIGATGELCTRGYSVMLGYWDDEERTREAIR 435
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + E+GY +VG
Sbjct: 436 -DGWMHTG-------------------------------------DLATIDEEGYCNIVG 457
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
R+KDM+IRGGEN+YP+EIEEF+ HP V +GVPDE+ GEEV I LK
Sbjct: 458 RVKDMLIRGGENVYPREIEEFLFRHPKVQSVQVFGVPDEKYGEEVCAWIVLK 509
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY +VGR+KDM+IRGGEN+YP+EIEEF+ HP V +GVPDE+ GEEV
Sbjct: 443 DLATIDEEGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQSVQVFGVPDEKYGEEV 502
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I LK ++IR +C+ +++ +
Sbjct: 503 CAWIVLKPGQSATDEEIRNYCRDQIAHY 530
>gi|124265537|ref|YP_001019541.1| AMP-binding domain-containing protein [Methylibium petroleiphilum
PM1]
gi|124258312|gb|ABM93306.1| putative long chain fatty-acid CoA ligase [Methylibium
petroleiphilum PM1]
Length = 562
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 92/186 (49%), Gaps = 39/186 (20%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + ST+ + K+VD RIVP G PGEL RG+ MLGYW+D KT+E I
Sbjct: 366 DPLERRVSTVGRIQPHCEVKLVDEAGRIVPRGEPGELCTRGYSVMLGYWDDAAKTREAID 425
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ TG D L +GY +VG
Sbjct: 426 AAGWMHTG-------------------------------------DLATLDAEGYCNIVG 448
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGEN+YP+EIEEF+ HP V + GVPD + GEE+ + ++ +L A
Sbjct: 449 RLKDMVIRGGENLYPREIEEFLYRHPKVQDVQVIGVPDPKYGEELCACVIVRAGEQLGAD 508
Query: 183 EDKSIS 188
E ++
Sbjct: 509 ELRAFC 514
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 388 DSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYG 447
D+AG + D L +GY +VGR+KDM+IRGGEN+YP+EIEEF+ HP V + G
Sbjct: 425 DAAG-WMHTGDLATLDAEGYCNIVGRLKDMVIRGGENLYPREIEEFLYRHPKVQDVQVIG 483
Query: 448 VPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
VPD + GEE+ + ++ +L AD++R FC G++++
Sbjct: 484 VPDPKYGEELCACVIVRAGEQLGADELRAFCDGEIAR 520
>gi|24418933|ref|NP_722502.1| acyl-CoA synthetase family member 2, mitochondrial precursor [Mus
musculus]
gi|81901906|sp|Q8VCW8.1|ACSF2_MOUSE RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|17390865|gb|AAH18371.1| Acyl-CoA synthetase family member 2 [Mus musculus]
gi|26329787|dbj|BAC28632.1| unnamed protein product [Mus musculus]
gi|38649240|gb|AAH63269.1| Acyl-CoA synthetase family member 2 [Mus musculus]
gi|148683985|gb|EDL15932.1| cDNA sequence BC018371, isoform CRA_b [Mus musculus]
gi|148683986|gb|EDL15933.1| cDNA sequence BC018371, isoform CRA_b [Mus musculus]
Length = 615
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 86/170 (50%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ + PGEL IRG+C M GYW + QKT ET+G D+W RTG
Sbjct: 441 EAQIVNVETGELTNLNVPGELYIRGYCVMQGYWGEPQKTFETVGQDKWYRTG-------- 492
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D ++ E G+ ++VGR KDMIIRGGENIYP
Sbjct: 493 -----------------------------DIALMDEQGFCKIVGRSKDMIIRGGENIYPA 523
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F HP V EA GV DERMGEE+ I+LK A E K+
Sbjct: 524 ELEDFFLKHPQVQEAQVVGVKDERMGEEICACIRLKSGETTTAEEIKAFC 573
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E G+ ++VGR KDMIIRGGENIYP E+E+F HP V EA GV DERMGEE+
Sbjct: 493 DIALMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFLKHPQVQEAQVVGVKDERMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK A++I+ FCKGK+S F
Sbjct: 553 CACIRLKSGETTTAEEIKAFCKGKISHF 580
>gi|408528321|emb|CCK26495.1| Putative acyl-CoA synthetase YngI [Streptomyces davawensis JCM
4913]
Length = 529
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 85/167 (50%), Gaps = 38/167 (22%)
Query: 19 FQAKVVDHNNRIV-PFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + P GT GEL RG+ MLGYW + ++T E + P RW+ TG
Sbjct: 357 VEVKIVDPATGVTQPRGTAGELCTRGYSVMLGYWNEPERTDEAVDPARWMHTG------- 409
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY ++VGRIKDMIIRGGENIYP
Sbjct: 410 ------------------------------DLAVMREDGYVEIVGRIKDMIIRGGENIYP 439
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
+EIEEF+ HP + + GVP ER GEEV + ++ A ED
Sbjct: 440 REIEEFLYAHPKIADVQVIGVPHERYGEEVLACVIPRDPADPPTLED 486
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D V+REDGY ++VGRIKDMIIRGGENIYP+EIEEF+ HP + + GVP
Sbjct: 403 ARWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADVQVIGVPH 462
Query: 451 ERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
ER GEEV + ++ A +D+R FC+G+++ +
Sbjct: 463 ERYGEEVLACVIPRDPADPPTLEDVRAFCEGQLAHY 498
>gi|407007059|gb|EKE22823.1| hypothetical protein ACD_6C00713G0002 [uncultured bacterium]
Length = 562
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 85/158 (53%), Gaps = 37/158 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD N ++VP G GEL +RG+ MLGYWED+ KT+E I RW+ TG
Sbjct: 384 LEVKIVDENGKVVPRGQLGELCVRGYSVMLGYWEDQDKTQEVIDAARWMHTG-------- 435
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + ++G+ ++ GRIKD++IRGGEN++PK
Sbjct: 436 -----------------------------DIAEMDDEGFVKIKGRIKDVVIRGGENLFPK 466
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
EIE+F+ THP V + GVPD + GEE+ I L EN
Sbjct: 467 EIEDFLYTHPAVSDVQVIGVPDHKYGEELCACIILHEN 504
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 60/94 (63%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D + ++G+ ++ GRIKD++IRGGEN++PKEIE+F+ THP V + GVP
Sbjct: 428 AARWMHTGDIAEMDDEGFVKIKGRIKDVVIRGGENLFPKEIEDFLYTHPAVSDVQVIGVP 487
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
D + GEE+ I L EN + IR +CK +S
Sbjct: 488 DHKYGEELCACIILHENDPCTEETIRQYCKEHIS 521
>gi|407274853|ref|ZP_11103323.1| AMP-binding domain protein [Rhodococcus sp. P14]
Length = 552
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 85/161 (52%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP G PGEL RG+ MLGYW KT + I RW+ TG
Sbjct: 372 LEVKIVDPATGLTVPRGEPGELCTRGYSVMLGYWNQPDKTADAIDAARWMHTG------- 424
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ DGY V GRIKDM+IRGGENIYP
Sbjct: 425 ------------------------------DIGVMDADGYVSVTGRIKDMVIRGGENIYP 454
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPD++ GEE+ + I+++E A
Sbjct: 455 REIEEFLYTHPDILDAQVVGVPDQKYGEELMVWIRMREGAA 495
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ DGY V GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVP
Sbjct: 417 AARWMHTGDIGVMDADGYVSVTGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVVGVP 476
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
D++ GEE+ + I+++E A L+A +R +C GK++ +
Sbjct: 477 DQKYGEELMVWIRMREGAAPLDAQSLREYCTGKLAHY 513
>gi|365155083|ref|ZP_09351476.1| hypothetical protein HMPREF1015_01128 [Bacillus smithii 7_3_47FAA]
gi|363628799|gb|EHL79508.1| hypothetical protein HMPREF1015_01128 [Bacillus smithii 7_3_47FAA]
Length = 546
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 98/187 (52%), Gaps = 40/187 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P L+ T+ + + K+V+ +NR++P T GEL RG+ M GY+++ + TKE I
Sbjct: 354 DPVSLRVETVGKALPHVEVKIVEPGSNRVLPPNTQGELCTRGYHVMKGYYKNPEATKEVI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D V+ E+GY ++
Sbjct: 414 DEDHWLHTG-------------------------------------DLAVMDENGYVRIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ HP +L+ GVPDE+ GEEVG I LKE +A
Sbjct: 437 GRLKDMIIRGGENIYPREIEEFLYQHPKILDVQVVGVPDEKFGEEVGAWIILKEGETADA 496
Query: 182 YEDKSIS 188
E ++
Sbjct: 497 EEIRAFC 503
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 66/87 (75%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY ++ GR+KDMIIRGGENIYP+EIEEF+ HP +L+ GVPDE+ GEEV
Sbjct: 423 DLAVMDENGYVRITGRLKDMIIRGGENIYPREIEEFLYQHPKILDVQVVGVPDEKFGEEV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
G I LKE +A++IR FCKGK+S+
Sbjct: 483 GAWIILKEGETADAEEIRAFCKGKISR 509
>gi|430806585|ref|ZP_19433700.1| AMP-binding domain protein [Cupriavidus sp. HMR-1]
gi|429501182|gb|EKZ99525.1| AMP-binding domain protein [Cupriavidus sp. HMR-1]
Length = 570
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 90/172 (52%), Gaps = 40/172 (23%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + ST+ + KVVD + + +P G GEL RG+ MLGYW+DE++T+E I
Sbjct: 376 DPIDKRVSTVGRVQPHLECKVVDVDGQTLPIGATGELCTRGYSVMLGYWDDEERTREAIR 435
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + E+GY +VG
Sbjct: 436 -DGWMHTG-------------------------------------DLATIDEEGYCNIVG 457
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
R+KDM+IRGGEN+YP+EIEEF+ HP V +GVPDE+ GEEV I LK
Sbjct: 458 RVKDMLIRGGENVYPREIEEFLFRHPKVQSVQVFGVPDEKYGEEVCAWIVLK 509
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY +VGR+KDM+IRGGEN+YP+EIEEF+ HP V +GVPDE+ GEEV
Sbjct: 443 DLATIDEEGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQSVQVFGVPDEKYGEEV 502
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I LK ++IR +C+ +++ +
Sbjct: 503 CAWIVLKPGQSATDEEIRNYCRDQIAHY 530
>gi|76811858|ref|YP_331592.1| AMP-binding protein [Burkholderia pseudomallei 1710b]
gi|167818006|ref|ZP_02449686.1| acyl-CoA synthetase [Burkholderia pseudomallei 91]
gi|254258460|ref|ZP_04949514.1| AMP-binding domain protein [Burkholderia pseudomallei 1710a]
gi|418542357|ref|ZP_13107796.1| AMP-binding domain protein [Burkholderia pseudomallei 1258a]
gi|418548842|ref|ZP_13113940.1| AMP-binding domain protein [Burkholderia pseudomallei 1258b]
gi|76581311|gb|ABA50786.1| AMP-binding enzyme domain protein [Burkholderia pseudomallei 1710b]
gi|254217149|gb|EET06533.1| AMP-binding domain protein [Burkholderia pseudomallei 1710a]
gi|385355749|gb|EIF61910.1| AMP-binding domain protein [Burkholderia pseudomallei 1258a]
gi|385357060|gb|EIF63139.1| AMP-binding domain protein [Burkholderia pseudomallei 1258b]
Length = 576
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 86/171 (50%), Gaps = 38/171 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD IVP G GEL RG+ MLGYW+DE +T+E + D W+RTG
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDDEARTREAV-VDGWMRTG-------- 447
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L E+G+ +VGR+KDM+IRGGEN+YP+
Sbjct: 448 -----------------------------DLATLDEEGFCNIVGRLKDMLIRGGENVYPR 478
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIEEF+ HP + +GVPD + GEEV I L+ + E + S
Sbjct: 479 EIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRAGETMTDDELREFCS 529
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + D++R FC G+++ +
Sbjct: 508 CAWIVLRAGETMTDDELREFCSGQIAHY 535
>gi|167826369|ref|ZP_02457840.1| acyl-CoA synthetase [Burkholderia pseudomallei 9]
gi|226193138|ref|ZP_03788748.1| AMP-binding domain protein [Burkholderia pseudomallei Pakistan 9]
gi|225934738|gb|EEH30715.1| AMP-binding domain protein [Burkholderia pseudomallei Pakistan 9]
Length = 576
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 86/171 (50%), Gaps = 38/171 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD IVP G GEL RG+ MLGYW+DE +T+E + D W+RTG
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDDEARTREAV-VDGWMRTG-------- 447
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L E+G+ +VGR+KDM+IRGGEN+YP+
Sbjct: 448 -----------------------------DLATLDEEGFCNIVGRLKDMLIRGGENVYPR 478
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIEEF+ HP + +GVPD + GEEV I L+ + E + S
Sbjct: 479 EIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRAGETMTDDELREFCS 529
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + D++R FC G+++ +
Sbjct: 508 CAWIVLRAGETMTDDELREFCSGQIAHY 535
>gi|254184020|ref|ZP_04890611.1| AMP-binding domain protein [Burkholderia pseudomallei 1655]
gi|184214552|gb|EDU11595.1| AMP-binding domain protein [Burkholderia pseudomallei 1655]
Length = 570
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 86/171 (50%), Gaps = 38/171 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD IVP G GEL RG+ MLGYW+DE +T+E + D W+RTG
Sbjct: 391 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDDEARTREAV-VDGWMRTG-------- 441
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L E+G+ +VGR+KDM+IRGGEN+YP+
Sbjct: 442 -----------------------------DLATLDEEGFCNIVGRLKDMLIRGGENVYPR 472
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIEEF+ HP + +GVPD + GEEV I L+ + E + S
Sbjct: 473 EIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRAGETMTDDELREFCS 523
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 442 DLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEV 501
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + D++R FC G+++ +
Sbjct: 502 CAWIVLRAGETMTDDELREFCSGQIAHY 529
>gi|74146500|dbj|BAE32109.1| unnamed protein product [Mus musculus]
Length = 615
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 86/170 (50%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ + PGEL IRG+C M GYW + QKT ET+G D+W RTG
Sbjct: 441 EAQIVNVETGELTNLNVPGELYIRGYCVMQGYWGEPQKTFETVGQDKWYRTG-------- 492
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D ++ E G+ ++VGR KDMIIRGGENIYP
Sbjct: 493 -----------------------------DIALMDEQGFCKIVGRSKDMIIRGGENIYPA 523
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F HP V EA GV DERMGEE+ I+LK A E K+
Sbjct: 524 ELEDFFLKHPQVQEAQVVGVKDERMGEEICACIRLKSGETTTAEEIKAFC 573
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E G+ ++VGR KDMIIRGGENIYP E+E+F HP V EA GV DERMGEE+
Sbjct: 493 DIALMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFLKHPQVQEAQVVGVKDERMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK A++I+ FCKGK+S F
Sbjct: 553 CACIRLKSGETTTAEEIKAFCKGKISHF 580
>gi|237814343|ref|YP_002898794.1| AMP-binding domain protein [Burkholderia pseudomallei MSHR346]
gi|237505976|gb|ACQ98294.1| acyl-CoA synthetase family member 2 [Burkholderia pseudomallei
MSHR346]
Length = 576
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 86/171 (50%), Gaps = 38/171 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD IVP G GEL RG+ MLGYW+DE +T+E + D W+RTG
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDDEARTREAV-VDGWMRTG-------- 447
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L E+G+ +VGR+KDM+IRGGEN+YP+
Sbjct: 448 -----------------------------DLATLDEEGFCNIVGRLKDMLIRGGENVYPR 478
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIEEF+ HP + +GVPD + GEEV I L+ + E + S
Sbjct: 479 EIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRAGETMTDDELREFCS 529
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + D++R FC G+++ +
Sbjct: 508 CAWIVLRAGETMTDDELREFCSGQIAHY 535
>gi|67643093|ref|ZP_00441842.1| AMP-binding enzyme domain protein [Burkholderia mallei GB8 horse 4]
gi|124383885|ref|YP_001027564.1| AMP-binding protein [Burkholderia mallei NCTC 10229]
gi|254175161|ref|ZP_04881822.1| AMP-binding enzyme domain protein [Burkholderia mallei ATCC 10399]
gi|254201539|ref|ZP_04907903.1| AMP-binding domain protein [Burkholderia mallei FMH]
gi|254206875|ref|ZP_04913226.1| AMP-binding domain protein [Burkholderia mallei JHU]
gi|254357430|ref|ZP_04973704.1| AMP-binding domain protein [Burkholderia mallei 2002721280]
gi|124291905|gb|ABN01174.1| AMP-binding enzyme domain protein [Burkholderia mallei NCTC 10229]
gi|147747433|gb|EDK54509.1| AMP-binding domain protein [Burkholderia mallei FMH]
gi|147752417|gb|EDK59483.1| AMP-binding domain protein [Burkholderia mallei JHU]
gi|148026494|gb|EDK84579.1| AMP-binding domain protein [Burkholderia mallei 2002721280]
gi|160696206|gb|EDP86176.1| AMP-binding enzyme domain protein [Burkholderia mallei ATCC 10399]
gi|238524342|gb|EEP87775.1| AMP-binding enzyme domain protein [Burkholderia mallei GB8 horse 4]
Length = 570
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 86/171 (50%), Gaps = 38/171 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD IVP G GEL RG+ MLGYW+DE +T+E + D W+RTG
Sbjct: 391 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDDEARTREAV-VDGWMRTG-------- 441
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L E+G+ +VGR+KDM+IRGGEN+YP+
Sbjct: 442 -----------------------------DLATLDEEGFCNIVGRLKDMLIRGGENVYPR 472
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIEEF+ HP + +GVPD + GEEV I L+ + E + S
Sbjct: 473 EIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRAGETMTDDELREFCS 523
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 442 DLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEV 501
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + D++R FC G+++ +
Sbjct: 502 CAWIVLRAGETMTDDELREFCSGQIAHY 529
>gi|443686109|gb|ELT89489.1| hypothetical protein CAPTEDRAFT_222402 [Capitella teleta]
Length = 577
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 87/178 (48%), Gaps = 39/178 (21%)
Query: 10 QFSTLSSS--SFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWL 67
Q ST+ + KVVD RIVP TPGEL IRGH M Y++DE T E IGPDRW
Sbjct: 389 QVSTIGRPLHHVEVKVVDREGRIVPVNTPGELCIRGHVVMHSYYQDEAATAEVIGPDRWY 448
Query: 68 RTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDM 127
+TG D L E Y ++VGRIKDM
Sbjct: 449 KTG-------------------------------------DLATLDEHSYAKIVGRIKDM 471
Query: 128 IIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
IIRGGENIYP ++E+ + + + + GVPD R+ E+V IKLKE A E K
Sbjct: 472 IIRGGENIYPLDVEQILYENSKIEDVQVVGVPDPRLQEQVCAWIKLKEGQTATADEIK 529
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E Y ++VGRIKDMIIRGGENIYP ++E+ + + + + GVPD R+ E+V
Sbjct: 452 DLATLDEHSYAKIVGRIKDMIIRGGENIYPLDVEQILYENSKIEDVQVVGVPDPRLQEQV 511
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKLKE AD+I+ FCKGK+S F
Sbjct: 512 CAWIKLKEGQTATADEIKEFCKGKISHF 539
>gi|134281418|ref|ZP_01768126.1| AMP-binding domain protein [Burkholderia pseudomallei 305]
gi|134247085|gb|EBA47171.1| AMP-binding domain protein [Burkholderia pseudomallei 305]
Length = 576
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 86/171 (50%), Gaps = 38/171 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD IVP G GEL RG+ MLGYW+DE +T+E + D W+RTG
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDDEARTREAV-VDGWMRTG-------- 447
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L E+G+ +VGR+KDM+IRGGEN+YP+
Sbjct: 448 -----------------------------DLATLDEEGFCNIVGRLKDMLIRGGENVYPR 478
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIEEF+ HP + +GVPD + GEEV I L+ + E + S
Sbjct: 479 EIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRAGETMTDDELREFCS 529
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + D++R FC G+++ +
Sbjct: 508 CAWIVLRAGETMTDDELREFCSGQIAHY 535
>gi|126438681|ref|YP_001060959.1| AMP-binding protein [Burkholderia pseudomallei 668]
gi|126218174|gb|ABN81680.1| AMP-binding domain protein [Burkholderia pseudomallei 668]
Length = 576
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 86/171 (50%), Gaps = 38/171 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD IVP G GEL RG+ MLGYW+DE +T+E + D W+RTG
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDDEARTREAV-VDGWMRTG-------- 447
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L E+G+ +VGR+KDM+IRGGEN+YP+
Sbjct: 448 -----------------------------DLATLDEEGFCNIVGRLKDMLIRGGENVYPR 478
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIEEF+ HP + +GVPD + GEEV I L+ + E + S
Sbjct: 479 EIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRAGETMTDDELREFCS 529
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + D++R FC G+++ +
Sbjct: 508 CAWIVLRAGETMTDDELREFCSGQIAHY 535
>gi|53721001|ref|YP_109987.1| AMP-binding domain-containing protein [Burkholderia pseudomallei
K96243]
gi|126453323|ref|YP_001068259.1| AMP-binding protein [Burkholderia pseudomallei 1106a]
gi|167847888|ref|ZP_02473396.1| acyl-CoA synthetase [Burkholderia pseudomallei B7210]
gi|167896446|ref|ZP_02483848.1| acyl-CoA synthetase [Burkholderia pseudomallei 7894]
gi|167904847|ref|ZP_02492052.1| acyl-CoA synthetase [Burkholderia pseudomallei NCTC 13177]
gi|167913125|ref|ZP_02500216.1| acyl-CoA synthetase [Burkholderia pseudomallei 112]
gi|242318046|ref|ZP_04817062.1| AMP-binding domain protein [Burkholderia pseudomallei 1106b]
gi|386863694|ref|YP_006276643.1| AMP-binding protein [Burkholderia pseudomallei 1026b]
gi|418394740|ref|ZP_12968837.1| AMP-binding domain protein [Burkholderia pseudomallei 354a]
gi|418537313|ref|ZP_13102953.1| AMP-binding domain protein [Burkholderia pseudomallei 1026a]
gi|418554847|ref|ZP_13119609.1| AMP-binding domain protein [Burkholderia pseudomallei 354e]
gi|52211415|emb|CAH37406.1| putative long-chain-fatty-acid--CoA ligase [Burkholderia
pseudomallei K96243]
gi|126226965|gb|ABN90505.1| AMP-binding domain protein [Burkholderia pseudomallei 1106a]
gi|242141285|gb|EES27687.1| AMP-binding domain protein [Burkholderia pseudomallei 1106b]
gi|385350022|gb|EIF56574.1| AMP-binding domain protein [Burkholderia pseudomallei 1026a]
gi|385369739|gb|EIF75049.1| AMP-binding domain protein [Burkholderia pseudomallei 354e]
gi|385374682|gb|EIF79520.1| AMP-binding domain protein [Burkholderia pseudomallei 354a]
gi|385660822|gb|AFI68245.1| AMP-binding domain protein [Burkholderia pseudomallei 1026b]
Length = 576
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 86/171 (50%), Gaps = 38/171 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD IVP G GEL RG+ MLGYW+DE +T+E + D W+RTG
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDDEARTREAV-VDGWMRTG-------- 447
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L E+G+ +VGR+KDM+IRGGEN+YP+
Sbjct: 448 -----------------------------DLATLDEEGFCNIVGRLKDMLIRGGENVYPR 478
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIEEF+ HP + +GVPD + GEEV I L+ + E + S
Sbjct: 479 EIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRAGETMTDDELREFCS 529
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + D++R FC G+++ +
Sbjct: 508 CAWIVLRAGETMTDDELREFCSGQIAHY 535
>gi|167740791|ref|ZP_02413565.1| acyl-CoA synthetase [Burkholderia pseudomallei 14]
gi|217423840|ref|ZP_03455340.1| AMP-binding domain protein [Burkholderia pseudomallei 576]
gi|217392903|gb|EEC32925.1| AMP-binding domain protein [Burkholderia pseudomallei 576]
Length = 576
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 86/171 (50%), Gaps = 38/171 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD IVP G GEL RG+ MLGYW+DE +T+E + D W+RTG
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDDEARTREAV-VDGWMRTG-------- 447
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L E+G+ +VGR+KDM+IRGGEN+YP+
Sbjct: 448 -----------------------------DLATLDEEGFCNIVGRLKDMLIRGGENVYPR 478
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIEEF+ HP + +GVPD + GEEV I L+ + E + S
Sbjct: 479 EIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRAGETMTDDELREFCS 529
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + D++R FC G+++ +
Sbjct: 508 CAWIVLRAGETMTDDELREFCSGQIAHY 535
>gi|453075501|ref|ZP_21978287.1| AMP-binding domain protein [Rhodococcus triatomae BKS 15-14]
gi|452762927|gb|EME21214.1| AMP-binding domain protein [Rhodococcus triatomae BKS 15-14]
Length = 561
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 89/165 (53%), Gaps = 39/165 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP G GEL RG+ MLGYW + +KT E I RW+ TG
Sbjct: 384 LEVKIVDPATGLTVPRGAAGELCTRGYSVMLGYWNNPEKTAEAIDAARWMHTG------- 436
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ DGY + GRIKDM+IRGGENIYP
Sbjct: 437 ------------------------------DIGVMDADGYVAITGRIKDMVIRGGENIYP 466
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN-AKLNA 181
+EIEEF+ THP++L+A GVPDE+ GEE+ ++++E A+L+A
Sbjct: 467 REIEEFLYTHPDILDAQVIGVPDEKYGEELMAWVRMREGAARLDA 511
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ DGY + GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVP
Sbjct: 429 AARWMHTGDIGVMDADGYVAITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVP 488
Query: 450 DERMGEEVGISIKLKEN-AKLNADDIRTFCKGKVSKF 485
DE+ GEE+ ++++E A+L+AD +R FC GK++++
Sbjct: 489 DEKYGEELMAWVRMREGAARLDADAVREFCTGKLARY 525
>gi|443622955|ref|ZP_21107468.1| putative Dicarboxylate-CoA ligase PimA [Streptomyces
viridochromogenes Tue57]
gi|443343506|gb|ELS57635.1| putative Dicarboxylate-CoA ligase PimA [Streptomyces
viridochromogenes Tue57]
Length = 530
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 79/150 (52%), Gaps = 38/150 (25%)
Query: 19 FQAKVVDHNNRIV-PFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + P GT GEL RG+ MLGYW + +KT E + P RW+ TG
Sbjct: 357 IEVKVVDPVTGVTQPRGTAGELCTRGYSVMLGYWNEPEKTAEAVDPGRWMHTG------- 409
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY ++VGRIKDMIIRGGENIYP
Sbjct: 410 ------------------------------DLAVMREDGYVEIVGRIKDMIIRGGENIYP 439
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
+EIEEF+ HP + + GVP ER GEEV
Sbjct: 440 REIEEFLYAHPKIADVQVVGVPHERYGEEV 469
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E GR + D V+REDGY ++VGRIKDMIIRGGENIYP+EIEEF+
Sbjct: 389 YWNEPEKTAEAVDPGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYA 448
Query: 437 HPNVLEAYAYGVPDERMGEEV-GISIKLKENAKLNADDIRTFCKGKVSKF 485
HP + + GVP ER GEEV I L +++R FC G+++ +
Sbjct: 449 HPKIADVQVVGVPHERYGEEVLACVIPRDPGDPLTLEELRAFCDGQLAHY 498
>gi|392953699|ref|ZP_10319253.1| AMP-binding domain protein [Hydrocarboniphaga effusa AP103]
gi|391859214|gb|EIT69743.1| AMP-binding domain protein [Hydrocarboniphaga effusa AP103]
Length = 582
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 92/178 (51%), Gaps = 39/178 (21%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + ST+ + KV+D + ++V G GEL RG+ MLGYW D +KT E I
Sbjct: 382 SPLDRRVSTVGRVQPHLECKVIDSDGKVVAHGERGELCTRGYSVMLGYWNDAEKTAEAID 441
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D ++ TG D + +GY +VG
Sbjct: 442 ADGYMHTG-------------------------------------DLATIDAEGYCAIVG 464
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
RIKD++IRGGENIYP+EIEEF+ HP + +A GVPDE+ GEEV + +KL+ A ++
Sbjct: 465 RIKDLVIRGGENIYPREIEEFLFKHPLIEDAQVVGVPDEKYGEEVCVWVKLRAGATMS 522
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGRIKD++IRGGENIYP+EIEEF+ HP + +A GVPDE+ GEEV
Sbjct: 450 DLATIDAEGYCAIVGRIKDLVIRGGENIYPREIEEFLFKHPLIEDAQVVGVPDEKYGEEV 509
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ +KL+ A ++ +R FC+ +++ +
Sbjct: 510 CVWVKLRAGATMSEAQLREFCRERIAHY 537
>gi|373487663|ref|ZP_09578330.1| AMP-dependent synthetase and ligase [Holophaga foetida DSM 6591]
gi|372008738|gb|EHP09363.1| AMP-dependent synthetase and ligase [Holophaga foetida DSM 6591]
Length = 546
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 97/187 (51%), Gaps = 40/187 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P D + ST+ S + K++D N RI+P G GE+ RG+ MLGYWED T ++I
Sbjct: 346 DPLDKRVSTVGSIHPHVEVKIIDPSNGRILPRGETGEICTRGYSVMLGYWEDTHSTHQSI 405
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
RW+ TG D ++ +DGY ++V
Sbjct: 406 DAGRWMHTG-------------------------------------DLGIMDDDGYLKIV 428
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIKDM++RGGENIYP+E+EEF+ T P V + GVPD + GEEV IKL+ A++
Sbjct: 429 GRIKDMVLRGGENIYPREVEEFLYTKPEVADVQVIGVPDIKYGEEVMAWIKLRPGAQVTE 488
Query: 182 YEDKSIS 188
E ++
Sbjct: 489 DELRTFC 495
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 70/96 (72%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
AGR + D ++ +DGY ++VGRIKDM++RGGENIYP+E+EEF+ T P V + GVP
Sbjct: 407 AGRWMHTGDLGIMDDDGYLKIVGRIKDMVLRGGENIYPREVEEFLYTKPEVADVQVIGVP 466
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
D + GEEV IKL+ A++ D++RTFCKGK++ +
Sbjct: 467 DIKYGEEVMAWIKLRPGAQVTEDELRTFCKGKIATY 502
>gi|53724018|ref|YP_104464.1| AMP-binding protein [Burkholderia mallei ATCC 23344]
gi|121601336|ref|YP_994632.1| AMP-binding protein [Burkholderia mallei SAVP1]
gi|126448872|ref|YP_001082538.1| AMP-binding protein [Burkholderia mallei NCTC 10247]
gi|167000139|ref|ZP_02265962.1| AMP-binding domain protein [Burkholderia mallei PRL-20]
gi|52427441|gb|AAU48034.1| AMP-binding enzyme domain protein [Burkholderia mallei ATCC 23344]
gi|121230146|gb|ABM52664.1| AMP-binding enzyme domain protein [Burkholderia mallei SAVP1]
gi|126241742|gb|ABO04835.1| AMP-binding enzyme domain protein [Burkholderia mallei NCTC 10247]
gi|243063942|gb|EES46128.1| AMP-binding domain protein [Burkholderia mallei PRL-20]
Length = 576
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 86/171 (50%), Gaps = 38/171 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD IVP G GEL RG+ MLGYW+DE +T+E + D W+RTG
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDDEARTREAV-VDGWMRTG-------- 447
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L E+G+ +VGR+KDM+IRGGEN+YP+
Sbjct: 448 -----------------------------DLATLDEEGFCNIVGRLKDMLIRGGENVYPR 478
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIEEF+ HP + +GVPD + GEEV I L+ + E + S
Sbjct: 479 EIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRAGETMTDDELREFCS 529
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + D++R FC G+++ +
Sbjct: 508 CAWIVLRAGETMTDDELREFCSGQIAHY 535
>gi|289768167|ref|ZP_06527545.1| acyl-CoA synthetase [Streptomyces lividans TK24]
gi|289698366|gb|EFD65795.1| acyl-CoA synthetase [Streptomyces lividans TK24]
Length = 541
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 84/160 (52%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + +P G GEL RG+ MLGYWE+ KT E I P RW+ TG
Sbjct: 367 IEVKVVDPVTGVTLPRGEAGELRTRGYSVMLGYWEEPGKTAEAIDPGRWMHTG------- 419
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY ++VGRIKDMIIRGGENIYP
Sbjct: 420 ------------------------------DLAVMREDGYVEIVGRIKDMIIRGGENIYP 449
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+E+EEF+ HP + + GVP ER GEEV + +++ A
Sbjct: 450 REVEEFLYAHPKIADVQVVGVPHERYGEEVLACVVVRDAA 489
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
GR + D V+REDGY ++VGRIKDMIIRGGENIYP+E+EEF+ HP + + GVP
Sbjct: 413 GRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREVEEFLYAHPKIADVQVVGVPH 472
Query: 451 ERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
ER GEEV + +++ A L +++R +C G+++ +
Sbjct: 473 ERYGEEVLACVVVRDAADPLTLEELRAYCAGQLAHY 508
>gi|167921063|ref|ZP_02508154.1| acyl-CoA synthetase [Burkholderia pseudomallei BCC215]
Length = 576
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 86/171 (50%), Gaps = 38/171 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD IVP G GEL RG+ MLGYW+DE +T+E + D W+RTG
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDDEARTREAV-VDGWMRTG-------- 447
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L E+G+ +VGR+KDM+IRGGEN+YP+
Sbjct: 448 -----------------------------DLATLDEEGFCNIVGRLKDMLIRGGENVYPR 478
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIEEF+ HP + +GVPD + GEEV I L+ + E + S
Sbjct: 479 EIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRAGETMTDDELREFCS 529
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + D++R FC G+++ +
Sbjct: 508 CAWIVLRAGETMTDDELREFCSGQIAHY 535
>gi|21224520|ref|NP_630299.1| AMP-binding domain-containing protein [Streptomyces coelicolor
A3(2)]
gi|4455741|emb|CAB36604.1| putative long-chain-fatty-acid-CoA ligase [Streptomyces coelicolor
A3(2)]
Length = 541
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 84/160 (52%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + +P G GEL RG+ MLGYWE+ KT E I P RW+ TG
Sbjct: 367 IEVKVVDPVTGVTLPRGEAGELRTRGYSVMLGYWEEPGKTAEAIDPGRWMHTG------- 419
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY ++VGRIKDMIIRGGENIYP
Sbjct: 420 ------------------------------DLAVMREDGYVEIVGRIKDMIIRGGENIYP 449
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+E+EEF+ HP + + GVP ER GEEV + +++ A
Sbjct: 450 REVEEFLYAHPKIADVQVVGVPHERYGEEVLACVVVRDAA 489
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
GR + D V+REDGY ++VGRIKDMIIRGGENIYP+E+EEF+ HP + + GVP
Sbjct: 413 GRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREVEEFLYAHPKIADVQVVGVPH 472
Query: 451 ERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
ER GEEV + +++ A L +++R +C G+++ +
Sbjct: 473 ERYGEEVLACVVVRDAADPLTLEELRAYCAGQLAHY 508
>gi|254298706|ref|ZP_04966157.1| AMP-binding domain protein [Burkholderia pseudomallei 406e]
gi|157808515|gb|EDO85685.1| AMP-binding domain protein [Burkholderia pseudomallei 406e]
Length = 570
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 86/171 (50%), Gaps = 38/171 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD IVP G GEL RG+ MLGYW+DE +T+E + D W+RTG
Sbjct: 391 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDDEARTREAV-VDGWMRTG-------- 441
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L E+G+ +VGR+KDM+IRGGEN+YP+
Sbjct: 442 -----------------------------DLATLDEEGFCNIVGRLKDMLIRGGENVYPR 472
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIEEF+ HP + +GVPD + GEEV I L+ + E + S
Sbjct: 473 EIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRAGETMTDDELREFCS 523
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 442 DLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEV 501
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + D++R FC G+++ +
Sbjct: 502 CAWIVLRAGETMTDDELREFCSGQIAHY 529
>gi|254186486|ref|ZP_04893003.1| AMP-binding domain protein [Burkholderia pseudomallei Pasteur
52237]
gi|254194656|ref|ZP_04901087.1| AMP-binding domain protein [Burkholderia pseudomallei S13]
gi|403520675|ref|YP_006654809.1| AMP-binding protein [Burkholderia pseudomallei BPC006]
gi|157934171|gb|EDO89841.1| AMP-binding domain protein [Burkholderia pseudomallei Pasteur
52237]
gi|169651406|gb|EDS84099.1| AMP-binding domain protein [Burkholderia pseudomallei S13]
gi|403076317|gb|AFR17897.1| AMP-binding domain protein [Burkholderia pseudomallei BPC006]
Length = 570
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 86/171 (50%), Gaps = 38/171 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD IVP G GEL RG+ MLGYW+DE +T+E + D W+RTG
Sbjct: 391 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDDEARTREAV-VDGWMRTG-------- 441
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L E+G+ +VGR+KDM+IRGGEN+YP+
Sbjct: 442 -----------------------------DLATLDEEGFCNIVGRLKDMLIRGGENVYPR 472
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIEEF+ HP + +GVPD + GEEV I L+ + E + S
Sbjct: 473 EIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRAGETMTDDELREFCS 523
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 442 DLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEV 501
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + D++R FC G+++ +
Sbjct: 502 CAWIVLRAGETMTDDELREFCSGQIAHY 529
>gi|418422601|ref|ZP_12995772.1| AMP-binding domain protein [Mycobacterium abscessus subsp. bolletii
BD]
gi|363993674|gb|EHM14896.1| AMP-binding domain protein [Mycobacterium abscessus subsp. bolletii
BD]
Length = 544
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 88/159 (55%), Gaps = 38/159 (23%)
Query: 19 FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD ++ V G PGEL RG+ MLGYW DE+ T+E + D W+ TG
Sbjct: 361 IEVKIVDPDSGETVQRGQPGELCTRGYSVMLGYWNDEEHTQEVLDADGWMHTG------- 413
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY ++GR+KDM+IRGGEN+YP
Sbjct: 414 ------------------------------DLAVMREDGYCTIIGRLKDMVIRGGENVYP 443
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
+EIEEF+ THP++ + + GVPDE+ GEE+ +++K +
Sbjct: 444 REIEEFLLTHPDIEDVHVVGVPDEKYGEELCAWVRMKAD 482
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+REDGY ++GR+KDM+IRGGEN+YP+EIEEF+ THP++ + + GVPDE+ GEE+
Sbjct: 414 DLAVMREDGYCTIIGRLKDMVIRGGENVYPREIEEFLLTHPDIEDVHVVGVPDEKYGEEL 473
Query: 458 GISIKLK-ENAKLNADDIRTFCKGKVSKF 485
+++K + ++A IR F G+++ +
Sbjct: 474 CAWVRMKADRVVIDAVAIRAFASGRLAHY 502
>gi|148683984|gb|EDL15931.1| cDNA sequence BC018371, isoform CRA_a [Mus musculus]
Length = 627
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 86/168 (51%), Gaps = 38/168 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ + PGEL IRG+C M GYW + QKT ET+G D+W RTG
Sbjct: 453 EAQIVNVETGELTNLNVPGELYIRGYCVMQGYWGEPQKTFETVGQDKWYRTG-------- 504
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D ++ E G+ ++VGR KDMIIRGGENIYP
Sbjct: 505 -----------------------------DIALMDEQGFCKIVGRSKDMIIRGGENIYPA 535
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
E+E+F HP V EA GV DERMGEE+ I+LK A E K+
Sbjct: 536 ELEDFFLKHPQVQEAQVVGVKDERMGEEICACIRLKSGETTTAEEIKA 583
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E G+ ++VGR KDMIIRGGENIYP E+E+F HP V EA GV DERMGEE+
Sbjct: 505 DIALMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFLKHPQVQEAQVVGVKDERMGEEI 564
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK A++I+ FCKGK+S F
Sbjct: 565 CACIRLKSGETTTAEEIKAFCKGKISHF 592
>gi|375141237|ref|YP_005001886.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359821858|gb|AEV74671.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 545
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 85/160 (53%), Gaps = 38/160 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ ++VD RI G PGE RG+ MLGYW+D+ +T+E + D W+RTG
Sbjct: 367 VEIRIVDPETGRITKRGEPGEFCTRGYSVMLGYWDDDDRTREAVDSDGWMRTG------- 419
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R+DGY ++GRIKDM+IRGGEN+YP
Sbjct: 420 ------------------------------DLAVMRDDGYCMIIGRIKDMVIRGGENVYP 449
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+E+EEF+ THP++ + GVPD + GEE+ I+++
Sbjct: 450 REVEEFLHTHPDIDDVQVIGVPDTKYGEEICAWIRMRAGC 489
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+R+DGY ++GRIKDM+IRGGEN+YP+E+EEF+ THP++ + GVPD + GEE+
Sbjct: 420 DLAVMRDDGYCMIIGRIKDMVIRGGENVYPREVEEFLHTHPDIDDVQVIGVPDTKYGEEI 479
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSKF 485
I+++ L+AD +R F G+++ +
Sbjct: 480 CAWIRMRAGCTPLDADGVRAFASGRLAHY 508
>gi|262376316|ref|ZP_06069546.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter lwoffii SH145]
gi|262308917|gb|EEY90050.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter lwoffii SH145]
Length = 562
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 85/158 (53%), Gaps = 37/158 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD N ++VP G GEL +RG+ MLGYWED+ KT+E I RW+ TG
Sbjct: 384 LEVKIVDENGKVVPRGQLGELCVRGYSVMLGYWEDQDKTQEVIDAARWMHTG-------- 435
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + ++G+ ++ GRIKD++IRGGEN++PK
Sbjct: 436 -----------------------------DIAEMDDEGFVKIKGRIKDVVIRGGENLFPK 466
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
EIE+F+ THP V + GVPD + GEE+ I L EN
Sbjct: 467 EIEDFLYTHPAVSDVQVIGVPDHKYGEELCACIILHEN 504
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 60/94 (63%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D + ++G+ ++ GRIKD++IRGGEN++PKEIE+F+ THP V + GVP
Sbjct: 428 AARWMHTGDIAEMDDEGFVKIKGRIKDVVIRGGENLFPKEIEDFLYTHPAVSDVQVIGVP 487
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
D + GEE+ I L EN + IR +CK +S
Sbjct: 488 DHKYGEELCACIILHENDPCTEETIRQYCKEHIS 521
>gi|455641051|gb|EMF20249.1| AMP-binding domain protein [Streptomyces gancidicus BKS 13-15]
Length = 530
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 92/177 (51%), Gaps = 44/177 (24%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP GT GEL RG+ MLGYW++ +KT E I RW+ TG
Sbjct: 357 IEVKIVDPATGVTVPRGTSGELCTRGYSVMLGYWDEPEKTAEAIDRGRWMHTG------- 409
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R+DGY ++VGRIKDMIIRGGENIYP
Sbjct: 410 ------------------------------DLAVMRDDGYVEIVGRIKDMIIRGGENIYP 439
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN------AKLNAYEDKSIS 188
+EIEEF+ HP V + GVP ER GEEV + ++ A+L+AY D ++
Sbjct: 440 REIEEFLYGHPKVADVQVVGVPHERYGEEVLACVIPRDPADPLTLAELHAYCDGQLA 496
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
GR + D V+R+DGY ++VGRIKDMIIRGGENIYP+EIEEF+ HP V + GVP
Sbjct: 403 GRWMHTGDLAVMRDDGYVEIVGRIKDMIIRGGENIYPREIEEFLYGHPKVADVQVVGVPH 462
Query: 451 ERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
ER GEEV + ++ A L ++ +C G+++ +
Sbjct: 463 ERYGEEVLACVIPRDPADPLTLAELHAYCDGQLAHY 498
>gi|451335840|ref|ZP_21906405.1| Acetoacetyl-CoA synthetase [Amycolatopsis azurea DSM 43854]
gi|449421732|gb|EMD27139.1| Acetoacetyl-CoA synthetase [Amycolatopsis azurea DSM 43854]
Length = 552
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 84/160 (52%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + VP G PGE RG+ MLGYWE KT E I RW+ TG
Sbjct: 367 LEVKVVDPETGLTVPRGEPGEFCTRGYSVMLGYWEQADKTAEAIDAARWMHTG------- 419
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D ++ DGY + GRIKDM+IRGGEN+YP
Sbjct: 420 ------------------------------DLAIMDADGYVNITGRIKDMVIRGGENLYP 449
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ THP++L+A GVPD++ GEE+ ++++E A
Sbjct: 450 REIEEFLYTHPDILDAQVIGVPDDKYGEELMAWVRMREGA 489
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D ++ DGY + GRIKDM+IRGGEN+YP+EIEEF+ THP++L+A GVP
Sbjct: 412 AARWMHTGDLAIMDADGYVNITGRIKDMVIRGGENLYPREIEEFLYTHPDILDAQVIGVP 471
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
D++ GEE+ ++++E A L A+ +R FC+GK++++
Sbjct: 472 DDKYGEELMAWVRMREGAAPLTAEAVREFCEGKLARY 508
>gi|120402570|ref|YP_952399.1| AMP-binding domain-containing protein [Mycobacterium vanbaalenii
PYR-1]
gi|119955388|gb|ABM12393.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
Length = 538
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 85/157 (54%), Gaps = 38/157 (24%)
Query: 19 FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + +V GTPGE RG+ MLGYW DE+KT + + D W+ TG
Sbjct: 362 VEIKIVDPDTGHVVERGTPGEFCTRGYSVMLGYWRDEEKTAQAVDADGWMHTG------- 414
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R DGY +VGRIKD++IRGGENIYP
Sbjct: 415 ------------------------------DLAVMRPDGYCNIVGRIKDVVIRGGENIYP 444
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
+E+EEF+ THP++ +A GVPD R GEE+ I+++
Sbjct: 445 REVEEFLYTHPDIEDAQVVGVPDARYGEEICAWIRMR 481
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y R+EE A + D V+R DGY +VGRIKD++IRGGENIYP+E+EEF+ T
Sbjct: 394 YWRDEEKTAQAVDADGWMHTGDLAVMRPDGYCNIVGRIKDVVIRGGENIYPREVEEFLYT 453
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
HP++ +A GVPD R GEE+ I+++ + L+A +R F GK++ +
Sbjct: 454 HPDIEDAQVVGVPDARYGEEICAWIRMRPGRRALDAAAVREFAAGKLAHY 503
>gi|226365555|ref|YP_002783338.1| AMP-binding domain protein [Rhodococcus opacus B4]
gi|226244045|dbj|BAH54393.1| putative fatty-acid--CoA ligase [Rhodococcus opacus B4]
Length = 545
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 87/161 (54%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP G PGEL RG+ MLGYW + +KT E I RW+ TG
Sbjct: 368 LEIKIVDPATGLTVPRGEPGELCTRGYSVMLGYWNNPEKTAEAIDAGRWMHTG------- 420
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ DGY + GRIKDM+IRGGEN+YP
Sbjct: 421 ------------------------------DIGVMDCDGYVAITGRIKDMVIRGGENVYP 450
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPD + GEE+ + +++KE+ +
Sbjct: 451 REIEEFLYTHPDILDAQVIGVPDAKYGEELMVWVRMKEDTE 491
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
AGR + D V+ DGY + GRIKDM+IRGGEN+YP+EIEEF+ THP++L+A GVP
Sbjct: 413 AGRWMHTGDIGVMDCDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVP 472
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
D + GEE+ + +++KE+ + L+A +R FC GK++ +
Sbjct: 473 DAKYGEELMVWVRMKEDTEPLDAAKVREFCTGKLAHY 509
>gi|167838422|ref|ZP_02465281.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
gi|424901542|ref|ZP_18325058.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
gi|390931917|gb|EIP89317.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
Length = 576
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 90/186 (48%), Gaps = 50/186 (26%)
Query: 1 MWDMNPTDLQFSTLSS------------SSFQAKVVDHNNRIVPFGTPGELLIRGHCNML 48
M + +P Q ST S +AK+VD IVP G GEL RG+ ML
Sbjct: 367 MTETSPVSFQSSTTDSLEKRTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVML 426
Query: 49 GYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSD 108
GYW+DE +T+E + D W+RTG D
Sbjct: 427 GYWDDEARTREAV-VDGWMRTG-------------------------------------D 448
Query: 109 QFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVG 168
L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 449 LATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVC 508
Query: 169 ISIKLK 174
I L+
Sbjct: 509 AWIVLR 514
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + D++R FC+G+++ +
Sbjct: 508 CAWIVLRTGEVMTDDELREFCRGQIAHY 535
>gi|119775039|ref|YP_927779.1| AMP-binding protein [Shewanella amazonensis SB2B]
gi|119767539|gb|ABM00110.1| AMP-binding family protein [Shewanella amazonensis SB2B]
Length = 573
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 88/164 (53%), Gaps = 37/164 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD + P G PG++ RG+C MLGYW D+ KT++TI + WL +G
Sbjct: 396 EVKIVDVFGKTQPIGEPGDVCSRGYCVMLGYWNDDAKTRDTIDSEGWLHSG--------- 446
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ E GY ++VGRIKDMIIRGGENIYP+E
Sbjct: 447 ----------------------------DLGVMDEHGYVRIVGRIKDMIIRGGENIYPRE 478
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
IEE + THP V +A +GV ++ GEEV IKL+ A L+ E
Sbjct: 479 IEEKLFTHPQVQDAAVFGVQSDKYGEEVCAWIKLRPGANLDEQE 522
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGRIKDMIIRGGENIYP+EIEE + THP V +A +GV ++ GEEV
Sbjct: 447 DLGVMDEHGYVRIVGRIKDMIIRGGENIYPREIEEKLFTHPQVQDAAVFGVQSDKYGEEV 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKL+ A L+ +IR F KV+ F
Sbjct: 507 CAWIKLRPGANLDEQEIRHFLTEKVAYF 534
>gi|47217609|emb|CAG03006.1| unnamed protein product [Tetraodon nigroviridis]
Length = 225
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 103/214 (48%), Gaps = 39/214 (18%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+V+ +VP G PGE+++RG+C M GYW DE KTKE I D W +TG
Sbjct: 43 EAKIVNPSTGEVVPVGQPGEVMVRGYCVMKGYWGDEDKTKECITEDGWYQTG-------- 94
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + GY Q+ GRIKD+IIRGGEN+YP
Sbjct: 95 -----------------------------DSGSMDAYGYLQIKGRIKDIIIRGGENVYPA 125
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDYHEFETMY 198
EIE+ + THP V EA GV D RMGEE+ + I+L + + +A E + + ++
Sbjct: 126 EIEKVLYTHPKVKEAQVVGVEDFRMGEEICVFIRLGDGQECSAGEIRDYCREKVSVPSLL 185
Query: 199 DSIMAHPNRTTPYYQWWSYDPNQSYVTHDNGFPV 232
H +Q + + YV +GFP+
Sbjct: 186 CLSHTHTLTGCLCFQMARFKIPR-YVLFVDGFPI 218
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 57/78 (73%)
Query: 406 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
GY Q+ GRIKD+IIRGGEN+YP EIE+ + THP V EA GV D RMGEE+ + I+L +
Sbjct: 103 GYLQIKGRIKDIIIRGGENVYPAEIEKVLYTHPKVKEAQVVGVEDFRMGEEICVFIRLGD 162
Query: 466 NAKLNADDIRTFCKGKVS 483
+ +A +IR +C+ KVS
Sbjct: 163 GQECSAGEIRDYCREKVS 180
>gi|167564616|ref|ZP_02357532.1| acyl-CoA synthetase [Burkholderia oklahomensis EO147]
gi|167571758|ref|ZP_02364632.1| acyl-CoA synthetase [Burkholderia oklahomensis C6786]
Length = 575
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 91/192 (47%), Gaps = 50/192 (26%)
Query: 1 MWDMNPTDLQFSTLSS------------SSFQAKVVDHNNRIVPFGTPGELLIRGHCNML 48
M + +P Q ST S +AK+VD IVP G GEL RG+ ML
Sbjct: 366 MTETSPVSFQSSTTDSLEKRTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVML 425
Query: 49 GYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSD 108
GYW+DE +T+E + D W+RTG D
Sbjct: 426 GYWDDEARTREAV-VDGWMRTG-------------------------------------D 447
Query: 109 QFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVG 168
L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 LATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVC 507
Query: 169 ISIKLKENAKLN 180
I L+ +
Sbjct: 508 AWIVLRAGETMT 519
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 447 DLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEV 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + D++R FC+G+++ +
Sbjct: 507 CAWIVLRAGETMTEDELREFCRGQIAHY 534
>gi|297191141|ref|ZP_06908539.1| acyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
gi|197723338|gb|EDY67246.1| acyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
Length = 535
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 88/167 (52%), Gaps = 38/167 (22%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + + +P G GEL RG+ MLGYW++ +KT E++ RW+ TG
Sbjct: 362 IEVKIVDPVSGVTLPRGEAGELCTRGYSVMLGYWDEPEKTAESVDAGRWMHTG------- 414
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY Q+VGRIKDMIIRGGEN+YP
Sbjct: 415 ------------------------------DLAVMREDGYVQIVGRIKDMIIRGGENVYP 444
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
+EIEEF+ HP + + GVPDER GEE+ + ++ A E+
Sbjct: 445 REIEEFLYAHPKIADVQVVGVPDERYGEEILACVIPRDPADAPTLEE 491
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E AGR + D V+REDGY Q+VGRIKDMIIRGGEN+YP+EIEEF+
Sbjct: 394 YWDEPEKTAESVDAGRWMHTGDLAVMREDGYVQIVGRIKDMIIRGGENVYPREIEEFLYA 453
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENAKL-NADDIRTFCKGKVSKF 485
HP + + GVPDER GEE+ + ++ A ++I FC+ +++ +
Sbjct: 454 HPKIADVQVVGVPDERYGEEILACVIPRDPADAPTLEEITEFCREQLAHY 503
>gi|381163253|ref|ZP_09872483.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora azurea NA-128]
gi|379255158|gb|EHY89084.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora azurea NA-128]
Length = 547
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 88/161 (54%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + VP GTPGEL RG+ MLGYWE +KT E I RW+ TG
Sbjct: 366 LEVKVVDPETGLTVPRGTPGELCTRGYSVMLGYWEQPEKTAEVIDAARWMHTG------- 418
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ +DGY + GR+KD++IRGGEN+YP
Sbjct: 419 ------------------------------DLAVMDDDGYLGITGRLKDLVIRGGENVYP 448
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ +HP++L+A GVPD + GEE+ +++++ A+
Sbjct: 449 REIEEFLYSHPDILDAQVIGVPDAKYGEELMAWVRMRDGAE 489
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 83/135 (61%), Gaps = 6/135 (4%)
Query: 356 KVALTWPNSMDSEARIYHYKKYL----REEENITVPDSAGRSIFEKDQFVLREDGYGQVV 411
+ LT P E Y L + E+ V D+A R + D V+ +DGY +
Sbjct: 374 ETGLTVPRGTPGELCTRGYSVMLGYWEQPEKTAEVIDAA-RWMHTGDLAVMDDDGYLGIT 432
Query: 412 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LN 470
GR+KD++IRGGEN+YP+EIEEF+ +HP++L+A GVPD + GEE+ +++++ A+ +
Sbjct: 433 GRLKDLVIRGGENVYPREIEEFLYSHPDILDAQVIGVPDAKYGEELMAWVRMRDGAEPVT 492
Query: 471 ADDIRTFCKGKVSKF 485
A+ +R FC G+++ +
Sbjct: 493 AESLREFCTGRLAHY 507
>gi|406596826|ref|YP_006747956.1| AMP-binding protein [Alteromonas macleodii ATCC 27126]
gi|406598074|ref|YP_006749204.1| AMP-binding protein [Alteromonas macleodii ATCC 27126]
gi|406374147|gb|AFS37402.1| AMP-binding domain protein [Alteromonas macleodii ATCC 27126]
gi|406375395|gb|AFS38650.1| AMP-binding domain protein [Alteromonas macleodii ATCC 27126]
Length = 579
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 85/161 (52%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D VP G PGE+ RG+C M GYW DE KTK TI + WL +G
Sbjct: 399 EVKIIDPQGNTVPIGEPGEICARGYCVMKGYWGDEVKTKATIDDEGWLHSG--------- 449
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + E+GY +VGRIKDMIIRGGENIYP+E
Sbjct: 450 ----------------------------DLGEMDEEGYVTIVGRIKDMIIRGGENIYPRE 481
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + H +V +A +G+PD + GE+V + IK KEN ++
Sbjct: 482 IEEVLYQHADVSDAAVFGIPDNKYGEQVCLWIKEKENRHID 522
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 61/84 (72%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ E+GY +VGRIKDMIIRGGENIYP+EIEE + H +V +A +G+PD + GE+V + I
Sbjct: 454 MDEEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHADVSDAAVFGIPDNKYGEQVCLWI 513
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
K KEN ++ D IR + K K++ F
Sbjct: 514 KEKENRHIDEDQIRDYLKSKLAYF 537
>gi|34497235|ref|NP_901450.1| AMP-binding protein [Chromobacterium violaceum ATCC 12472]
gi|34103091|gb|AAQ59454.1| probable long chain fatty-acid CoA ligase [Chromobacterium
violaceum ATCC 12472]
Length = 562
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 89/174 (51%), Gaps = 39/174 (22%)
Query: 5 NPTDLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
P + + ST+ S+ + K+VD +VP G GEL +RG+ MLGYWEDE T+ I
Sbjct: 366 TPLEQRVSTVGSAHPHVELKIVDAEGGVVPRGQSGELCVRGYSVMLGYWEDEAMTRAAID 425
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
+ W+ TG D +REDG +VG
Sbjct: 426 AEGWMHTG-------------------------------------DLASMREDGSVNIVG 448
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
R+KDM+IRGGEN+YP+EIEEF+ HP + + GVPD R GEE+ I+L++
Sbjct: 449 RVKDMVIRGGENVYPREIEEFLYRHPKIQDVQVIGVPDARYGEELCAWIRLRDG 502
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D +REDG +VGR+KDM+IRGGEN+YP+EIEEF+ HP + + GVPD R GEE+
Sbjct: 434 DLASMREDGSVNIVGRVKDMVIRGGENVYPREIEEFLYRHPKIQDVQVIGVPDARYGEEL 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+L++ +DIR+FC+G+++ +
Sbjct: 494 CAWIRLRDGECATEEDIRSFCQGQIAHY 521
>gi|324997477|ref|ZP_08118589.1| AMP-binding domain protein [Pseudonocardia sp. P1]
Length = 571
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 90/173 (52%), Gaps = 40/173 (23%)
Query: 8 DLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPD 64
DL+ ST+ + KVVD + +P G GEL RG+ MLGYW+ +KT E I
Sbjct: 373 DLRVSTVGRVHPHLEVKVVDPETGKTLPRGEAGELCTRGYSVMLGYWDQPEKTAEVIDRA 432
Query: 65 RWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRI 124
RW+ TG D V+ ++GY + GRI
Sbjct: 433 RWMHTG-------------------------------------DIAVMDDEGYVNITGRI 455
Query: 125 KDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
KDM+IRGGEN+YP+EIEEF+ THP+VL+A GVPD R GEE+ + L+E A
Sbjct: 456 KDMVIRGGENVYPREIEEFLYTHPDVLDAQVIGVPDARYGEELCAWVVLREGA 508
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 381 EENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
E+ V D A R + D V+ ++GY + GRIKDM+IRGGEN+YP+EIEEF+ THP+V
Sbjct: 423 EKTAEVIDRA-RWMHTGDIAVMDDEGYVNITGRIKDMVIRGGENVYPREIEEFLYTHPDV 481
Query: 441 LEAYAYGVPDERMGEEVGISIKLKEN-AKLNADDIRTFCKGKVSKF 485
L+A GVPD R GEE+ + L+E A + + ++ F G+++ +
Sbjct: 482 LDAQVIGVPDARYGEELCAWVVLREGAAAMTPESLKEFATGRLAHY 527
>gi|126667842|ref|ZP_01738808.1| acyl-CoA synthase [Marinobacter sp. ELB17]
gi|126627658|gb|EAZ98289.1| acyl-CoA synthase [Marinobacter sp. ELB17]
Length = 543
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 95/176 (53%), Gaps = 40/176 (22%)
Query: 5 NPTDLQFSTLSSSS--FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + Q +T+ + ++K+V+ + IVP G GEL RG+ ML YW + +KT+ETI
Sbjct: 349 DPFEKQVTTVGRTQPHLESKIVEPASGNIVPRGEIGELCTRGYSVMLKYWNNAEKTRETI 408
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
W+ TG D + EDGY Q+V
Sbjct: 409 DDAGWMHTG-------------------------------------DLATMDEDGYIQIV 431
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
GRIKDM+IRGGENIYPKE+EEF+ THP++ E GVPDE+ GEE+ +KL+ +A
Sbjct: 432 GRIKDMVIRGGENIYPKEVEEFLYTHPSIEEVQVTGVPDEKFGEELVAWVKLRPDA 487
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDGY Q+VGRIKDM+IRGGENIYPKE+EEF+ THP++ E GVPDE+ GEE+
Sbjct: 418 DLATMDEDGYIQIVGRIKDMVIRGGENIYPKEVEEFLYTHPSIEEVQVTGVPDEKFGEEL 477
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
+KL+ +A ++ADD+ FCKG+++ +
Sbjct: 478 VAWVKLRPDADSVDADDLIAFCKGQIAHY 506
>gi|374607539|ref|ZP_09680340.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
gi|373555375|gb|EHP81945.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
Length = 1055
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 86/159 (54%), Gaps = 38/159 (23%)
Query: 19 FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ ++VD + + V G PGE RG+ MLGYW D+ +T+E + D W+ TG
Sbjct: 879 VEIRIVDPDTGKTVKRGEPGEFCTRGYSVMLGYWNDDDRTREAVDADGWMHTG------- 931
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R+DGY V+GRIKDM+IRGGEN+YP
Sbjct: 932 ------------------------------DLAVMRDDGYCMVIGRIKDMVIRGGENVYP 961
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
+E+EEF+ THP++ +A GVPDE+ GEE+ I+++
Sbjct: 962 REVEEFLHTHPDIDDAQVIGVPDEKYGEEICAWIRMRSG 1000
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+R+DGY V+GRIKDM+IRGGEN+YP+E+EEF+ THP++ +A GVPDE+ GEE+
Sbjct: 932 DLAVMRDDGYCMVIGRIKDMVIRGGENVYPREVEEFLHTHPDIDDAQVIGVPDEKYGEEI 991
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSKF 485
I+++ L+AD +R F GK++ +
Sbjct: 992 CAWIRMRSGRTPLDADAVRAFASGKLAHY 1020
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 59/148 (39%), Gaps = 38/148 (25%)
Query: 18 SFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ + ++VD V G GE++ G M YWE E +T E
Sbjct: 344 NVETRIVDDQMNDVAKGEVGEIVYLGPLVMKEYWEKEAETAEAF---------------- 387
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
+ G+F+S D DGY VV R KDMII GGENIY
Sbjct: 388 --------------------RGGWFHS--GDLVRQDSDGYIYVVDRKKDMIISGGENIYC 425
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGE 165
E+E + T V E GVPD + GE
Sbjct: 426 AEVENALATCAKVAEVAIIGVPDPKWGE 453
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY VV R KDMII GGENIY E+E + T V E GVPD + GE + +
Sbjct: 403 DGYIYVVDRKKDMIISGGENIYCAEVENALATCAKVAEVAIIGVPDPKWGETPMAVVVPR 462
Query: 465 ENAKLNADD-IRTFCKGKVSKF 485
+ A DD I C+ ++++
Sbjct: 463 DPADPPTDDEIEAHCRQHLARY 484
>gi|357387650|ref|YP_004902489.1| putative long-chain fatty-acid--CoA ligase [Kitasatospora setae
KM-6054]
gi|311894125|dbj|BAJ26533.1| putative long-chain fatty-acid--CoA ligase [Kitasatospora setae
KM-6054]
Length = 562
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 83/161 (51%), Gaps = 38/161 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD VP G PGEL RG+ MLGYW + KT E + PD W+ TG
Sbjct: 386 LEVKVVDPETGHTVPRGEPGELCTRGYSVMLGYWAEPVKTAEAVDPDGWMHTG------- 438
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ DGY + GRIKDM+IRGGEN+YP
Sbjct: 439 ------------------------------DLAVMDADGYLSITGRIKDMVIRGGENVYP 468
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+E+EEF+ HP+VL+ GVPD + GEE+ ++++E A+
Sbjct: 469 REVEEFLYAHPDVLDVQVIGVPDAKYGEELMAWVRMREGAR 509
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ DGY + GRIKDM+IRGGEN+YP+E+EEF+ HP+VL+ GVPD + GEE+
Sbjct: 439 DLAVMDADGYLSITGRIKDMVIRGGENVYPREVEEFLYAHPDVLDVQVIGVPDAKYGEEL 498
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSKF 485
++++E A+ L A+ +R FC G+++ F
Sbjct: 499 MAWVRMREGARPLTAEAVRAFCTGRLAHF 527
>gi|171315822|ref|ZP_02905053.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
gi|171099011|gb|EDT43796.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
Length = 575
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 86/162 (53%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD RIVP G GEL +G+ MLGYW+D+ KT+E + D W+RTG
Sbjct: 396 LEVKIVDPEGRIVPVGATGELCTKGYSVMLGYWDDDAKTREVL-VDGWMRTG-------- 446
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L DGY +VGR+KDM+IRGGEN+YP+
Sbjct: 447 -----------------------------DLATLDADGYCNIVGRLKDMVIRGGENVYPR 477
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEE++ HP + A +GVPD + GEE+ I L+ + +++
Sbjct: 478 EIEEYLFRHPKIQSAQVFGVPDAKYGEELCAWIVLRADEQMS 519
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L DGY +VGR+KDM+IRGGEN+YP+EIEE++ HP + A +GVPD + GEE+
Sbjct: 447 DLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEYLFRHPKIQSAQVFGVPDAKYGEEL 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + +++ DD+R FC G+++ +
Sbjct: 507 CAWIVLRADEQMSEDDVRAFCTGQIAHY 534
>gi|83719308|ref|YP_443798.1| AMP-binding domain-containing protein [Burkholderia thailandensis
E264]
gi|167620972|ref|ZP_02389603.1| acyl-CoA synthetase [Burkholderia thailandensis Bt4]
gi|83653133|gb|ABC37196.1| AMP-binding enzyme domain protein [Burkholderia thailandensis E264]
Length = 576
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 91/192 (47%), Gaps = 50/192 (26%)
Query: 1 MWDMNPTDLQFSTLSS------------SSFQAKVVDHNNRIVPFGTPGELLIRGHCNML 48
M + +P Q ST S +AK+VD IVP G GEL RG+ ML
Sbjct: 367 MTETSPVSFQSSTTDSLEKRTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVML 426
Query: 49 GYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSD 108
GYW+DE +T+E + D W+RTG D
Sbjct: 427 GYWDDEARTREAV-VDGWMRTG-------------------------------------D 448
Query: 109 QFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVG 168
L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 449 LATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDPKYGEEVC 508
Query: 169 ISIKLKENAKLN 180
I L+ +
Sbjct: 509 AWIVLRAGETMT 520
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDPKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + D++R FC+G+++ +
Sbjct: 508 CAWIVLRAGETMTDDELREFCRGQIAHY 535
>gi|359148032|ref|ZP_09181274.1| AMP-binding domain protein [Streptomyces sp. S4]
Length = 541
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 83/160 (51%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD I V G GEL RG+ MLGYWE+ ++T E + P W+ TG
Sbjct: 369 LEVKVVDPGTGITVERGEAGELCTRGYSVMLGYWEEPERTAEAVDPAGWMHTG------- 421
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D VLR DGY ++VGRIKDMIIRGGENIYP
Sbjct: 422 ------------------------------DLAVLRRDGYVEIVGRIKDMIIRGGENIYP 451
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ THP + + GVPD + GEEV + K+NA
Sbjct: 452 REIEEFLYTHPKIADVQVVGVPDGKYGEEVLACVIPKQNA 491
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D VLR DGY ++VGRIKDMIIRGGENIYP+EIEEF+ THP + + GVPD + GEEV
Sbjct: 422 DLAVLRRDGYVEIVGRIKDMIIRGGENIYPREIEEFLYTHPKIADVQVVGVPDGKYGEEV 481
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
+ K+NA L +++R FC+ +++ +
Sbjct: 482 LACVIPKQNAGPLTLEELRAFCRDRLAHY 510
>gi|302541757|ref|ZP_07294099.1| substrate-CoA ligase [Streptomyces hygroscopicus ATCC 53653]
gi|302459375|gb|EFL22468.1| substrate-CoA ligase [Streptomyces himastatinicus ATCC 53653]
Length = 566
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 83/160 (51%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KV+D + VP GT GEL RG+ MLGYWE+ T E I P W+ TG
Sbjct: 374 VEVKVMDPATGLTVPRGTRGELCTRGYSVMLGYWEEPDLTAEAIDPAGWMHTG------- 426
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ E GY Q+VGRIKDMIIRGGEN+YP
Sbjct: 427 ------------------------------DLAVMDEHGYVQIVGRIKDMIIRGGENVYP 456
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ THP + + GVPDE+ GEE+ + L+E A
Sbjct: 457 REIEEFLHTHPKIADVQVVGVPDEKYGEEILACVILREGA 496
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 79/133 (59%), Gaps = 6/133 (4%)
Query: 358 ALTWPNSMDSEARIYHYKKYLR--EEENITVP--DSAGRSIFEKDQFVLREDGYGQVVGR 413
LT P E Y L EE ++T D AG + D V+ E GY Q+VGR
Sbjct: 384 GLTVPRGTRGELCTRGYSVMLGYWEEPDLTAEAIDPAG-WMHTGDLAVMDEHGYVQIVGR 442
Query: 414 IKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNAD 472
IKDMIIRGGEN+YP+EIEEF+ THP + + GVPDE+ GEE+ + L+E A L D
Sbjct: 443 IKDMIIRGGENVYPREIEEFLHTHPKIADVQVVGVPDEKYGEEILACVILREGATALTRD 502
Query: 473 DIRTFCKGKVSKF 485
++ FC+G+++ F
Sbjct: 503 ELARFCRGRLAAF 515
>gi|167582832|ref|ZP_02375706.1| acyl-CoA synthetase [Burkholderia thailandensis TXDOH]
Length = 576
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 91/192 (47%), Gaps = 50/192 (26%)
Query: 1 MWDMNPTDLQFSTLSS------------SSFQAKVVDHNNRIVPFGTPGELLIRGHCNML 48
M + +P Q ST S +AK+VD IVP G GEL RG+ ML
Sbjct: 367 MTETSPVSFQSSTTDSLEKRTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVML 426
Query: 49 GYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSD 108
GYW+DE +T+E + D W+RTG D
Sbjct: 427 GYWDDEARTREAV-VDGWMRTG-------------------------------------D 448
Query: 109 QFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVG 168
L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 449 LATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDPKYGEEVC 508
Query: 169 ISIKLKENAKLN 180
I L+ +
Sbjct: 509 AWIVLRAGETMT 520
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+G+ +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDPKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + D++R FC+G+++ +
Sbjct: 508 CAWIVLRAGETMTDDELREFCRGQIAHY 535
>gi|118386067|ref|XP_001026155.1| AMP-binding enzyme family protein [Tetrahymena thermophila]
gi|89307922|gb|EAS05910.1| AMP-binding enzyme family protein [Tetrahymena thermophila SB210]
Length = 605
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 89/164 (54%), Gaps = 37/164 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+++ ++V G GE+ +RG CNM YW D + T +TI D WL+TG
Sbjct: 420 EVKLINKQGKVVQIGEKGEICVRGFCNMEKYWGDIKNTNKTIDNDNWLKTG--------- 470
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D L E GY ++VGRIK++IIRGGEN+YPKE
Sbjct: 471 ----------------------------DVGQLDERGYLKIVGRIKELIIRGGENVYPKE 502
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
IEE+++T+P +L+ Y GVPD++ GEE+ I+LK+ + + E
Sbjct: 503 IEEYLRTNPKILDVYVVGVPDQKFGEEIFALIRLKDGVQFDKQE 546
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 65/84 (77%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
L E GY ++VGRIK++IIRGGEN+YPKEIEE+++T+P +L+ Y GVPD++ GEE+ I
Sbjct: 475 LDERGYLKIVGRIKELIIRGGENVYPKEIEEYLRTNPKILDVYVVGVPDQKFGEEIFALI 534
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
+LK+ + + +I FCKG+++ F
Sbjct: 535 RLKDGVQFDKQEIYDFCKGQIAHF 558
>gi|291454988|ref|ZP_06594378.1| acyl-CoA synthetase [Streptomyces albus J1074]
gi|421742720|ref|ZP_16180829.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Streptomyces
sp. SM8]
gi|291357937|gb|EFE84839.1| acyl-CoA synthetase [Streptomyces albus J1074]
gi|406688858|gb|EKC92770.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Streptomyces
sp. SM8]
Length = 541
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 83/160 (51%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD I V G GEL RG+ MLGYWE+ ++T E + P W+ TG
Sbjct: 369 LEVKVVDPGTGITVERGEAGELCTRGYSVMLGYWEEPERTAEAVDPAGWMHTG------- 421
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D VLR DGY ++VGRIKDMIIRGGENIYP
Sbjct: 422 ------------------------------DLAVLRRDGYVEIVGRIKDMIIRGGENIYP 451
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ THP + + GVPD + GEEV + K+NA
Sbjct: 452 REIEEFLYTHPKIADVQVVGVPDGKYGEEVLACVIPKQNA 491
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D VLR DGY ++VGRIKDMIIRGGENIYP+EIEEF+ THP + + GVPD + GEEV
Sbjct: 422 DLAVLRRDGYVEIVGRIKDMIIRGGENIYPREIEEFLYTHPKIADVQVVGVPDGKYGEEV 481
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
+ K+NA L +++R FC+ +++ +
Sbjct: 482 LACVIPKQNAGPLTLEELRAFCRDRLAHY 510
>gi|182435126|ref|YP_001822845.1| AMP-binding protein [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178463642|dbj|BAG18162.1| putative acyl-CoA synthetase [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 535
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 84/160 (52%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + +P G+ GEL RG+ MLGYW+ +T + + P RW+ TG
Sbjct: 363 IEVKVVDPVTGVTLPRGSSGELRTRGYSVMLGYWDQPDRTADVVDPGRWMHTG------- 415
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY QVVGRIKDMIIRGGEN+YP
Sbjct: 416 ------------------------------DLAVMREDGYVQVVGRIKDMIIRGGENVYP 445
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ HP V + GVPDER GEE+ + ++ A
Sbjct: 446 REIEEFLYGHPKVADVQVVGVPDERYGEEILACVIPRDPA 485
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 76/133 (57%), Gaps = 6/133 (4%)
Query: 358 ALTWPNSMDSEARIYHYKKYL----REEENITVPDSAGRSIFEKDQFVLREDGYGQVVGR 413
+T P E R Y L + + V D GR + D V+REDGY QVVGR
Sbjct: 373 GVTLPRGSSGELRTRGYSVMLGYWDQPDRTADVVDP-GRWMHTGDLAVMREDGYVQVVGR 431
Query: 414 IKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNAD 472
IKDMIIRGGEN+YP+EIEEF+ HP V + GVPDER GEE+ + ++ A D
Sbjct: 432 IKDMIIRGGENVYPREIEEFLYGHPKVADVQVVGVPDERYGEEILACVIPRDPADPPTLD 491
Query: 473 DIRTFCKGKVSKF 485
+I +C+ +++ +
Sbjct: 492 EISAYCRERLAHY 504
>gi|392543499|ref|ZP_10290636.1| AMP-binding domain protein [Pseudoalteromonas piscicida JCM 20779]
Length = 569
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 37/155 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D I P GTPGE+ RG+C M GYW+D +KT TI D WL +G
Sbjct: 394 EVKIIDELGHIAPIGTPGEVCARGYCVMKGYWQDPEKTAATIDDDGWLHSG--------- 444
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ ++G+ +VGRIKDMIIRGGENIYP+E
Sbjct: 445 ----------------------------DLGVMDDEGFVSIVGRIKDMIIRGGENIYPRE 476
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
IEE + H ++ +A +G+ DE+ GEEV + ++LK
Sbjct: 477 IEEVLYHHDDIQDAAVFGIKDEKYGEEVCVWVQLK 511
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ ++G+ +VGRIKDMIIRGGENIYP+EIEE + H ++ +A +G+ DE+ GEEV
Sbjct: 445 DLGVMDDEGFVSIVGRIKDMIIRGGENIYPREIEEVLYHHDDIQDAAVFGIKDEKYGEEV 504
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ ++LK ++ +DIR F K K++ F
Sbjct: 505 CVWVQLKPGHYISEEDIRVFLKDKLAYF 532
>gi|404424017|ref|ZP_11005628.1| AMP-binding domain protein [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403652493|gb|EJZ07537.1| AMP-binding domain protein [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 538
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 91/173 (52%), Gaps = 39/173 (22%)
Query: 19 FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + V G PGE RG+ MLGYW++ KT E I D W+ TG
Sbjct: 359 IEVKIVDPDTGETVERGQPGEFCTRGYSVMLGYWDEPAKTAEAIDADGWMHTG------- 411
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY VVGRIKDM+IRGGEN+YP
Sbjct: 412 ------------------------------DLAVMREDGYCAVVGRIKDMVIRGGENVYP 441
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN-AKLNAYEDKSISS 189
+EIEEF+ THP++ +A GVPD + GEEV +++K A L+A ++ ++
Sbjct: 442 REIEEFLYTHPDIDDAQVIGVPDAKYGEEVCAWVRMKPGRAPLDAESLRAFAT 494
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+REDGY VVGRIKDM+IRGGEN+YP+EIEEF+ THP++ +A GVPD + GEEV
Sbjct: 412 DLAVMREDGYCAVVGRIKDMVIRGGENVYPREIEEFLYTHPDIDDAQVIGVPDAKYGEEV 471
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSKF 485
+++K A L+A+ +R F GK++ +
Sbjct: 472 CAWVRMKPGRAPLDAESLRAFATGKLAHY 500
>gi|414168197|ref|ZP_11424401.1| hypothetical protein HMPREF9696_02256 [Afipia clevelandensis ATCC
49720]
gi|410888240|gb|EKS36044.1| hypothetical protein HMPREF9696_02256 [Afipia clevelandensis ATCC
49720]
Length = 562
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 83/169 (49%), Gaps = 37/169 (21%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD IVPFGT GEL RG+ M GYW DE +T E I D W+ TG
Sbjct: 383 EVKIVDAQGHIVPFGTVGELCTRGYSIMKGYWADETRTAEAIDQDGWMHTG--------- 433
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D L GY +VGRIKD++IRGGEN+YP+E
Sbjct: 434 ----------------------------DLATLDAGGYCNIVGRIKDLVIRGGENVYPRE 465
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
IEE++ HP + + +GVPD+R GEE+ I LK + E ++
Sbjct: 466 IEEYLYAHPKIQDVQVFGVPDKRYGEELCAYICLKAGERATDEEIRAFC 514
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L GY +VGRIKD++IRGGEN+YP+EIEE++ HP + + +GVPD+R GEE+
Sbjct: 434 DLATLDAGGYCNIVGRIKDLVIRGGENVYPREIEEYLYAHPKIQDVQVFGVPDKRYGEEL 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I LK + ++IR FC+G+++ +
Sbjct: 494 CAYICLKAGERATDEEIRAFCRGQIAHY 521
>gi|386849494|ref|YP_006267507.1| AMP-binding protein [Actinoplanes sp. SE50/110]
gi|359836998|gb|AEV85439.1| AMP-binding domain protein [Actinoplanes sp. SE50/110]
Length = 544
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 81/159 (50%), Gaps = 37/159 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
Q KVVD VP G GEL RG+ MLGYW +KT E + D W+ TG
Sbjct: 363 LQVKVVDPAGATVPIGESGELCTRGYSVMLGYWGQPEKTAEAVDADGWMHTG-------- 414
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + DGY ++ GRIKDM+IRGGEN+YP+
Sbjct: 415 -----------------------------DLAEMDADGYLRITGRIKDMVIRGGENVYPR 445
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
E+EEF+ THP+V++ GVPDE+ GEEV I+++ A
Sbjct: 446 EVEEFLLTHPDVVDVQVIGVPDEKFGEEVMAWIRMRPGA 484
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY ++ GRIKDM+IRGGEN+YP+E+EEF+ THP+V++ GVPDE+ GEEV I+++
Sbjct: 422 DGYLRITGRIKDMVIRGGENVYPREVEEFLLTHPDVVDVQVIGVPDEKFGEEVMAWIRMR 481
Query: 465 ENAK-LNADDIRTFCKGKVSKF 485
A L+A ++R FC G+++ F
Sbjct: 482 PGATPLDAANVRAFCAGRLAHF 503
>gi|312140942|ref|YP_004008278.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
gi|311890281|emb|CBH49599.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
Length = 550
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 86/161 (53%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP G GEL RG+ MLGYW + +KT E I RW+ TG
Sbjct: 373 LEVKIVDPATGLTVPRGEAGELCTRGYSVMLGYWNNPEKTSEAIDSARWMHTG------- 425
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ DGY + GRIKDM+IRGGEN+YP
Sbjct: 426 ------------------------------DIGVMDSDGYVAITGRIKDMVIRGGENVYP 455
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPD + GEE+ + I+++E A+
Sbjct: 456 REIEEFLYTHPDILDAQVIGVPDAKYGEELMVWIRMREGAQ 496
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 72/99 (72%), Gaps = 2/99 (2%)
Query: 388 DSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYG 447
DSA R + D V+ DGY + GRIKDM+IRGGEN+YP+EIEEF+ THP++L+A G
Sbjct: 417 DSA-RWMHTGDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIG 475
Query: 448 VPDERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
VPD + GEE+ + I+++E A+ L+ D +R FC G+++ +
Sbjct: 476 VPDAKYGEELMVWIRMREGAQPLDVDKVREFCTGRLAHY 514
>gi|291436418|ref|ZP_06575808.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672]
gi|291339313|gb|EFE66269.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672]
Length = 541
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 84/167 (50%), Gaps = 38/167 (22%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD P G+ GEL RG+ MLGYW + ++T E + RW+ TG
Sbjct: 368 IEVKVVDPATGTTRPRGSTGELCTRGYSVMLGYWNEPERTAEVVDAGRWMHTG------- 420
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY ++VGRIKDMIIRGGENIYP
Sbjct: 421 ------------------------------DLAVMREDGYVEIVGRIKDMIIRGGENIYP 450
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
+EIEEF+ THP V + GVP ER GEEV + ++ A ED
Sbjct: 451 REIEEFLHTHPEVADVQVVGVPHERYGEEVLACVVPRDPADPPTLED 497
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E AGR + D V+REDGY ++VGRIKDMIIRGGENIYP+EIEEF+ T
Sbjct: 400 YWNEPERTAEVVDAGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLHT 459
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
HP V + GVP ER GEEV + ++ A +D+R FC+ +++ +
Sbjct: 460 HPEVADVQVVGVPHERYGEEVLACVVPRDPADPPTLEDLRAFCRDRLAHY 509
>gi|350590439|ref|XP_003131621.3| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial [Sus
scrofa]
Length = 615
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 88/170 (51%), Gaps = 38/170 (22%)
Query: 20 QAKVVDHNNR-IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++++ R + TPGEL IRG+C M GYW D QKT E IG D+W RTG
Sbjct: 441 EAQIMNMETRTLAELNTPGELCIRGYCVMQGYWGDPQKTDEVIGQDKWYRTG-------- 492
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E G+ ++VGR KDMIIRGGENIYP
Sbjct: 493 -----------------------------DIAVMDEQGFCRIVGRAKDMIIRGGENIYPA 523
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F THP V + GV D RMGEE+ I+LK+ K A E K+
Sbjct: 524 ELEDFFHTHPQVQDVQVVGVKDNRMGEEICACIRLKKGEKTTAEEIKAFC 573
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E G+ ++VGR KDMIIRGGENIYP E+E+F THP V + GV D RMGEE+
Sbjct: 493 DIAVMDEQGFCRIVGRAKDMIIRGGENIYPAELEDFFHTHPQVQDVQVVGVKDNRMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ K A++I+ FCKGK+S F
Sbjct: 553 CACIRLKKGEKTTAEEIKAFCKGKISHF 580
>gi|408681796|ref|YP_006881623.1| acetoacetyl-CoA synthetase or Long-chain-fatty-acid--CoA ligase
[Streptomyces venezuelae ATCC 10712]
gi|328886125|emb|CCA59364.1| acetoacetyl-CoA synthetase or Long-chain-fatty-acid--CoA ligase
[Streptomyces venezuelae ATCC 10712]
Length = 534
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 86/169 (50%), Gaps = 38/169 (22%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + V GT GEL RG+ MLGYW++ +KT E I RW+ TG
Sbjct: 360 VEVKVVDPATGLTVARGTAGELCTRGYSVMLGYWDEPEKTGEAIDAGRWMHTG------- 412
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D +R+DGY Q+VGRIKDMIIRGGEN+YP
Sbjct: 413 ------------------------------DLATMRDDGYVQIVGRIKDMIIRGGENVYP 442
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
+EIEEF+ HP + + GVPDER GEE+ + ++ A ED +
Sbjct: 443 REIEEFLHGHPGIADVQVVGVPDERYGEEILACVIPRDPAAPPTLEDVT 491
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
AGR + D +R+DGY Q+VGRIKDMIIRGGEN+YP+EIEEF+ HP + + GVP
Sbjct: 405 AGRWMHTGDLATMRDDGYVQIVGRIKDMIIRGGENVYPREIEEFLHGHPGIADVQVVGVP 464
Query: 450 DERMGEEV-GISIKLKENAKLNADDIRTFCKGKVSKF 485
DER GEE+ I A +D+ FC+ +++ +
Sbjct: 465 DERYGEEILACVIPRDPAAPPTLEDVTAFCRDRLAHY 501
>gi|325675420|ref|ZP_08155104.1| substrate-CoA ligase [Rhodococcus equi ATCC 33707]
gi|325553391|gb|EGD23069.1| substrate-CoA ligase [Rhodococcus equi ATCC 33707]
Length = 550
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 86/161 (53%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + VP G GEL RG+ MLGYW + +KT E I RW+ TG
Sbjct: 373 LEVKIVDPATGLTVPRGEAGELCTRGYSVMLGYWNNPEKTSEAIDSARWMHTG------- 425
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ DGY + GRIKDM+IRGGEN+YP
Sbjct: 426 ------------------------------DIGVMDSDGYVAITGRIKDMVIRGGENVYP 455
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPD + GEE+ + I+++E A+
Sbjct: 456 REIEEFLYTHPDILDAQVIGVPDAKYGEELMVWIRMREGAQ 496
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 72/99 (72%), Gaps = 2/99 (2%)
Query: 388 DSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYG 447
DSA R + D V+ DGY + GRIKDM+IRGGEN+YP+EIEEF+ THP++L+A G
Sbjct: 417 DSA-RWMHTGDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIG 475
Query: 448 VPDERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
VPD + GEE+ + I+++E A+ L+ D +R FC G+++ +
Sbjct: 476 VPDAKYGEELMVWIRMREGAQPLDVDKVREFCTGRLAHY 514
>gi|453050271|gb|EME97816.1| AMP-binding domain protein [Streptomyces mobaraensis NBRC 13819 =
DSM 40847]
Length = 543
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 84/160 (52%), Gaps = 38/160 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD VP G GEL RG+ MLGYW + ++T E I DRW+ TG
Sbjct: 363 IEVKIVDPETGATVPRGEHGELCTRGYSVMLGYWNEPERTAEAIDADRWMHTG------- 415
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ E+GY ++VGR KDMIIRGGEN+YP
Sbjct: 416 ------------------------------DLAVMDEEGYVRIVGRSKDMIIRGGENVYP 445
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ THP + + GVPD+RMGEE+ + L ++A
Sbjct: 446 REIEEFLHTHPKIADVQVIGVPDDRMGEEIMACVILHDDA 485
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E A R + D V+ E+GY ++VGR KDMIIRGGEN+YP+EIEEF+ T
Sbjct: 395 YWNEPERTAEAIDADRWMHTGDLAVMDEEGYVRIVGRSKDMIIRGGENVYPREIEEFLHT 454
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
HP + + GVPD+RMGEE+ + L ++A L+ D++ +C+G+++ +
Sbjct: 455 HPKIADVQVIGVPDDRMGEEIMACVILHDDAGGLSRDELARYCRGRLAHY 504
>gi|194289655|ref|YP_002005562.1| amp-binding domain protein [Cupriavidus taiwanensis LMG 19424]
gi|193223490|emb|CAQ69495.1| putative Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase
[Cupriavidus taiwanensis LMG 19424]
Length = 574
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 92/183 (50%), Gaps = 42/183 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + K+VD + IVP G GEL RG+ MLGYW+DE +T E I
Sbjct: 379 DPLDKRTTTVGRIQPHLEVKIVDASGAIVPVGEKGELCTRGYSVMLGYWDDEARTAEAIR 438
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + E+GY +VG
Sbjct: 439 -DGWMHTG-------------------------------------DLATIDEEGYCNIVG 460
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGENIYP+EIEEF+ HP V +GVPD + GEEV I LK NA
Sbjct: 461 RVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFGVPDPKYGEEVCAWIVLKPGE--NAT 518
Query: 183 EDK 185
ED+
Sbjct: 519 EDE 521
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY +VGR+KDM+IRGGENIYP+EIEEF+ HP V +GVPD + GEEV
Sbjct: 446 DLATIDEEGYCNIVGRVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFGVPDPKYGEEV 505
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I LK D+IR FC+ +++ +
Sbjct: 506 CAWIVLKPGENATEDEIRAFCRDQIAHY 533
>gi|17545161|ref|NP_518563.1| AMP-binding protein [Ralstonia solanacearum GMI1000]
gi|17427452|emb|CAD13970.1| putative fatty-acid--coa ligase transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 571
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 86/172 (50%), Gaps = 40/172 (23%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ Q K+VD +VP G GEL RG+ MLGYW+DE KT E+I
Sbjct: 376 DPLDKRVTTVGRVQPHLQVKLVDGAGEVVPVGEKGELCTRGYSVMLGYWDDEAKTAESI- 434
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+RTG D DGY +VG
Sbjct: 435 QDGWMRTG-------------------------------------DLATFDADGYCNIVG 457
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
R+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK
Sbjct: 458 RVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLK 509
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 57/81 (70%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY +VGR+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK
Sbjct: 450 DGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLK 509
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+ ++IR FC+G+++ +
Sbjct: 510 PGQQATQEEIREFCQGQIAHY 530
>gi|409200096|ref|ZP_11228299.1| AMP-binding domain protein [Pseudoalteromonas flavipulchra JG1]
Length = 584
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 37/155 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D I P GTPGE+ RG+C M GYW+D +KT TI D WL +G
Sbjct: 406 EVKIIDELGHIAPIGTPGEVCARGYCVMKGYWQDPEKTAATIDNDGWLHSG--------- 456
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ ++G+ +VGRIKDMIIRGGENIYP+E
Sbjct: 457 ----------------------------DLGVMDDEGFVSIVGRIKDMIIRGGENIYPRE 488
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
IEE + H ++ +A +G+ DE+ GEEV + ++LK
Sbjct: 489 IEEVLYHHHDIQDAAVFGIKDEKYGEEVCVWVQLK 523
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ ++G+ +VGRIKDMIIRGGENIYP+EIEE + H ++ +A +G+ DE+ GEEV
Sbjct: 457 DLGVMDDEGFVSIVGRIKDMIIRGGENIYPREIEEVLYHHHDIQDAAVFGIKDEKYGEEV 516
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ ++LK ++ DIR F K K++ F
Sbjct: 517 CVWVQLKPGHYISEQDIRIFLKDKLAYF 544
>gi|418049143|ref|ZP_12687230.1| o-succinylbenzoate--CoA ligase., 4-coumarate--CoA ligase
[Mycobacterium rhodesiae JS60]
gi|353190048|gb|EHB55558.1| o-succinylbenzoate--CoA ligase., 4-coumarate--CoA ligase
[Mycobacterium rhodesiae JS60]
Length = 1045
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 83/157 (52%), Gaps = 38/157 (24%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD +V GT GE RG+ MLGYW DE KT E I + W+ TG
Sbjct: 867 VEIKVVDPETGALVERGTTGEFCTRGYSVMLGYWNDEAKTAEAIDDEGWMHTG------- 919
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R+DGY Q+VGRIKDM+IRGGEN+YP
Sbjct: 920 ------------------------------DLAVMRDDGYCQIVGRIKDMVIRGGENVYP 949
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
+EIEEF+ THP++ + GVPD R GEE+ +K++
Sbjct: 950 REIEEFLYTHPDIDDVQVIGVPDPRYGEEICAWVKMR 986
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+R+DGY Q+VGRIKDM+IRGGEN+YP+EIEEF+ THP++ + GVPD R GEE+
Sbjct: 920 DLAVMRDDGYCQIVGRIKDMVIRGGENVYPREIEEFLYTHPDIDDVQVIGVPDPRYGEEI 979
Query: 458 GISIKLK-ENAKLNADDIRTFCKGKVSKF 485
+K++ A L+A ++ F GK++ +
Sbjct: 980 CAWVKMRAGAAPLDAAAVQEFAAGKLAHY 1008
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 67/149 (44%), Gaps = 40/149 (26%)
Query: 18 SFQAKVVDHN-NRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTS 76
+ +A++VD + N +VP G GE++ +G M GYW
Sbjct: 335 NVEARIVDDDMNDVVP-GIVGEIVYQGPLVMAGYWN------------------------ 369
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
KP + + + G+F+S D EDGY VV R KDMII GGENIY
Sbjct: 370 ------------KPAETAEAFRGGWFHS--GDLVRQDEDGYIYVVDRKKDMIISGGENIY 415
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGE 165
E+E + HP + E GVPD + GE
Sbjct: 416 SAEVENVLAAHPKIAEVAVIGVPDPKWGE 444
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
EDGY VV R KDMII GGENIY E+E + HP + E GVPD + GE I
Sbjct: 393 EDGYIYVVDRKKDMIISGGENIYSAEVENVLAAHPKIAEVAVIGVPDPKWGETPLAVIVP 452
Query: 464 KENA-KLNADDIRTFCKGKVSKF 485
++ A +AD+I + C+ +++ +
Sbjct: 453 RDPADPPSADEIESHCRERLAAY 475
>gi|300783387|ref|YP_003763678.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|384146618|ref|YP_005529434.1| AMP-binding protein [Amycolatopsis mediterranei S699]
gi|399535272|ref|YP_006547934.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
gi|299792901|gb|ADJ43276.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|340524772|gb|AEK39977.1| AMP-binding domain protein [Amycolatopsis mediterranei S699]
gi|398316042|gb|AFO74989.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
Length = 548
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 90/173 (52%), Gaps = 40/173 (23%)
Query: 8 DLQFSTLSS--SSFQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPD 64
DL+ ST+ + K+VD + VP G GEL RG+ MLGYW D KT E I
Sbjct: 350 DLRVSTVGRVHPHLEIKLVDPATGLTVPRGEAGELCTRGYSVMLGYWNDPGKTAEAIDAA 409
Query: 65 RWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRI 124
RW+ TG D V+ DGY + GRI
Sbjct: 410 RWMHTG-------------------------------------DLAVMDADGYVNITGRI 432
Query: 125 KDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
KDM+IRGGENIYP+EIEEF+ THP++++A GVPD + GEE+ +KL+++A
Sbjct: 433 KDMVIRGGENIYPREIEEFLYTHPDIVDAQVIGVPDVKYGEELCAWVKLRDHA 485
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ DGY + GRIKDM+IRGGENIYP+EIEEF+ THP++++A GVP
Sbjct: 408 AARWMHTGDLAVMDADGYVNITGRIKDMVIRGGENIYPREIEEFLYTHPDIVDAQVIGVP 467
Query: 450 DERMGEEVGISIKLKEN-AKLNADDIRTFCKGKVSKF 485
D + GEE+ +KL+++ A++ A+ +R F GK++ +
Sbjct: 468 DVKYGEELCAWVKLRDHAAEVTAETLRAFATGKLAHY 504
>gi|410862984|ref|YP_006978218.1| AMP-binding protein [Alteromonas macleodii AltDE1]
gi|410820246|gb|AFV86863.1| AMP-binding domain protein [Alteromonas macleodii AltDE1]
Length = 579
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 86/161 (53%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D +P G PGE+ +G+C M GYW DE KTK TI + WL +G
Sbjct: 399 EVKIIDAKGNTLPIGEPGEICAKGYCVMKGYWGDEAKTKATIDDEGWLHSG--------- 449
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + ++GY +VGRIKDMIIRGGENIYP+E
Sbjct: 450 ----------------------------DLGEMDDEGYVTIVGRIKDMIIRGGENIYPRE 481
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + H +V +A +G+PD+R GE+V + IK KEN ++
Sbjct: 482 IEEVLYQHNDVSDAAVFGIPDDRYGEQVCLWIKAKENRHID 522
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 62/84 (73%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ ++GY +VGRIKDMIIRGGENIYP+EIEE + H +V +A +G+PD+R GE+V + I
Sbjct: 454 MDDEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHNDVSDAAVFGIPDDRYGEQVCLWI 513
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
K KEN ++ + IR + K K++ F
Sbjct: 514 KAKENRHIDEEKIREYLKSKLAYF 537
>gi|170699476|ref|ZP_02890519.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria
IOP40-10]
gi|170135625|gb|EDT03910.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria
IOP40-10]
Length = 575
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 85/162 (52%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD RIVP G GEL +G+ MLGYW+D+ KT+E + D W+ TG
Sbjct: 396 LEVKIVDPEGRIVPVGATGELCTKGYSVMLGYWDDDAKTREVL-VDGWMHTG-------- 446
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L DGY +VGR+KDM+IRGGEN+YP+
Sbjct: 447 -----------------------------DLATLDADGYCNIVGRLKDMVIRGGENVYPR 477
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + A +GVPD + GEE+ I L+ + +++
Sbjct: 478 EIEEFLFRHPKIQSAQVFGVPDAKYGEELCAWIVLRADEQMS 519
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L DGY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + A +GVPD + GEE+
Sbjct: 447 DLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDAKYGEEL 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + +++ DD+R FC G+++ +
Sbjct: 507 CAWIVLRADEQMSEDDVRAFCNGQIAHY 534
>gi|73541161|ref|YP_295681.1| AMP-binding protein [Ralstonia eutropha JMP134]
gi|72118574|gb|AAZ60837.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 578
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 91/188 (48%), Gaps = 40/188 (21%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + ST+ + KVVD +IVP G GEL RG+ MLGYW+DE +T E I
Sbjct: 383 DPLDKRVSTVGRVQPHLECKVVDATGQIVPVGETGELCTRGYSVMLGYWDDEARTSEAIR 442
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + +GY +VG
Sbjct: 443 -DGWMHTG-------------------------------------DLATIDAEGYCNIVG 464
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD++ GEE+ + LK
Sbjct: 465 RVKDMLIRGGENVYPREIEEFLFRHPKVQAVQVFGVPDQKYGEEICAWVVLKPGQTATED 524
Query: 183 EDKSISSD 190
E ++ D
Sbjct: 525 EIRAFCRD 532
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGR+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD++ GEE+
Sbjct: 450 DLATIDAEGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVQVFGVPDQKYGEEI 509
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ LK D+IR FC+ +++ +
Sbjct: 510 CAWVVLKPGQTATEDEIRAFCRDQIAHY 537
>gi|115350155|ref|YP_771994.1| AMP-binding domain-containing protein [Burkholderia ambifaria AMMD]
gi|115280143|gb|ABI85660.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria AMMD]
Length = 575
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 85/162 (52%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD RIVP G GEL +G+ MLGYW+D+ KT+E + D W+ TG
Sbjct: 396 LEVKIVDPEGRIVPVGATGELCTKGYSVMLGYWDDDAKTREVL-VDGWMHTG-------- 446
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L DGY +VGR+KDM+IRGGEN+YP+
Sbjct: 447 -----------------------------DLATLDADGYCNIVGRLKDMVIRGGENVYPR 477
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + A +GVPD + GEE+ I L+ + +++
Sbjct: 478 EIEEFLFRHPKIQSAQVFGVPDAKYGEELCAWIVLRADEQMS 519
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L DGY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + A +GVPD + GEE+
Sbjct: 447 DLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDAKYGEEL 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + +++ DD+R FC G+++ +
Sbjct: 507 CAWIVLRADEQMSEDDVRAFCNGQIAHY 534
>gi|403279576|ref|XP_003931323.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 3 [Saimiri boliviensis boliviensis]
Length = 572
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 83/161 (51%), Gaps = 37/161 (22%)
Query: 28 NRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRK 87
++ TPGEL IRG+C MLGYW + +KT+E + D+W RTG
Sbjct: 407 GKLAELNTPGELFIRGYCVMLGYWGEPRKTEEVVDQDKWYRTG----------------- 449
Query: 88 LKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTH 147
D ++ E G+ ++VGR KDMIIRGGENIYP E+E+F+ TH
Sbjct: 450 --------------------DIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELEDFLHTH 489
Query: 148 PNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
P V E GV D+RMGEE+ I+LK + E K+
Sbjct: 490 PKVQEVQVVGVKDDRMGEEICACIRLKSGEESTPEEIKAFC 530
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E G+ ++VGR KDMIIRGGENIYP E+E+F+ THP V E GV D+RMGEE+
Sbjct: 450 DIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELEDFLHTHPKVQEVQVVGVKDDRMGEEI 509
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK + ++I+ FCKGK+S F
Sbjct: 510 CACIRLKSGEESTPEEIKAFCKGKISHF 537
>gi|357623987|gb|EHJ74918.1| hypothetical protein KGM_15816 [Danaus plexippus]
Length = 235
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 81/149 (54%), Gaps = 38/149 (25%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ KVVD + +VPFG GEL +RG+ NM+ Y D KTKET+ D WL TG
Sbjct: 121 VEVKVVDSSGSMVPFGCQGELAVRGYNNMINYLNDPIKTKETL-RDGWLYTG-------- 171
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D F L DGYG++VGR KD+IIRGGENI PK
Sbjct: 172 -----------------------------DTFTLTPDGYGKLVGRSKDVIIRGGENIAPK 202
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
EIE+ I TH NV+E+ G+ DER+GEE+
Sbjct: 203 EIEDCINTHSNVIESQVVGLADERLGEEI 231
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 49/64 (76%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
++ D F L DGYG++VGR KD+IIRGGENI PKEIE+ I TH NV+E+ G+ DER+
Sbjct: 168 LYTGDTFTLTPDGYGKLVGRSKDVIIRGGENIAPKEIEDCINTHSNVIESQVVGLADERL 227
Query: 454 GEEV 457
GEE+
Sbjct: 228 GEEI 231
>gi|332142719|ref|YP_004428457.1| AMP-binding domain-containing protein [Alteromonas macleodii str.
'Deep ecotype']
gi|327552741|gb|AEA99459.1| AMP-binding domain protein [Alteromonas macleodii str. 'Deep
ecotype']
Length = 579
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 86/161 (53%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D +P G PGE+ +G+C M GYW DE KTK TI + WL +G
Sbjct: 399 EVKIIDAKGNTLPIGEPGEICAKGYCVMKGYWGDEAKTKATIDDEGWLHSG--------- 449
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + ++GY +VGRIKDMIIRGGENIYP+E
Sbjct: 450 ----------------------------DLGEMDDEGYVTIVGRIKDMIIRGGENIYPRE 481
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + H +V +A +G+PD+R GE+V + IK KEN ++
Sbjct: 482 IEEVLYQHNDVSDAAVFGIPDDRYGEQVCLWIKAKENRHID 522
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 62/84 (73%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ ++GY +VGRIKDMIIRGGENIYP+EIEE + H +V +A +G+PD+R GE+V + I
Sbjct: 454 MDDEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHNDVSDAAVFGIPDDRYGEQVCLWI 513
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
K KEN ++ + IR + K K++ F
Sbjct: 514 KAKENRHIDEEKIREYLKSKLAYF 537
>gi|47215399|emb|CAG01096.1| unnamed protein product [Tetraodon nigroviridis]
Length = 836
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 91/184 (49%), Gaps = 40/184 (21%)
Query: 8 DLQFSTLSS--SSFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPD 64
DL+ +T+ S +AKVVD VP GT GEL+IRG+C M GYW D KT E I
Sbjct: 670 DLKTNTVGCIMSHTEAKVVDPVTGETVPVGTSGELMIRGYCVMRGYWNDPVKTSEAITDA 729
Query: 65 RWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRI 124
W +TG D L GY ++ GR+
Sbjct: 730 HWYKTG-------------------------------------DTASLNSLGYCRIEGRM 752
Query: 125 KDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
KDMIIRGGEN+YP E+E+F+ HP + EA GV DER+GE+V ++LK +A E
Sbjct: 753 KDMIIRGGENVYPAEVEQFLFKHPKIQEAQVVGVKDERLGEQVCACVRLKNGQSSSAEEI 812
Query: 185 KSIS 188
K+
Sbjct: 813 KAFC 816
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L GY ++ GR+KDMIIRGGEN+YP E+E+F+ HP + EA GV DER+GE+V
Sbjct: 736 DTASLNSLGYCRIEGRMKDMIIRGGENVYPAEVEQFLFKHPKIQEAQVVGVKDERLGEQV 795
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++LK +A++I+ FCKG++S F
Sbjct: 796 CACVRLKNGQSSSAEEIKAFCKGQISHF 823
>gi|387813582|ref|YP_005429064.1| long-chain-fatty-acid-CoA ligase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381338594|emb|CCG94641.1| long-chain-fatty-acid-CoA ligase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 562
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 95/184 (51%), Gaps = 40/184 (21%)
Query: 4 MNPTDLQFSTLSSSS--FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKET 60
++P + Q +T+ + + K+VD ++P G GEL RG+ ML YW +E+KT+E
Sbjct: 367 LDPFEKQVTTVGRTQPHLETKIVDPGTGNVMPRGEIGELCTRGYSVMLKYWNNEEKTREA 426
Query: 61 IGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQV 120
I W+ TG D + EDGY Q+
Sbjct: 427 IDDAGWMHTG-------------------------------------DLATMDEDGYIQI 449
Query: 121 VGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
VGRIKDM+IRGGENIYPKEIEEF+ THP + E G+PDE+ GEE+ +KL+ +A
Sbjct: 450 VGRIKDMVIRGGENIYPKEIEEFLYTHPAIEEVQVTGIPDEKYGEELIAWVKLRPDADPV 509
Query: 181 AYED 184
ED
Sbjct: 510 TAED 513
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 74/107 (69%), Gaps = 2/107 (1%)
Query: 380 EEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
EE+ D AG + D + EDGY Q+VGRIKDM+IRGGENIYPKEIEEF+ THP
Sbjct: 420 EEKTREAIDDAGW-MHTGDLATMDEDGYIQIVGRIKDMVIRGGENIYPKEIEEFLYTHPA 478
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
+ E G+PDE+ GEE+ +KL+ +A + A+D++ FCKGK++ F
Sbjct: 479 IEEVQVTGIPDEKYGEELIAWVKLRPDADPVTAEDLQAFCKGKIAHF 525
>gi|403279574|ref|XP_003931322.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 2 [Saimiri boliviensis boliviensis]
Length = 602
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 83/161 (51%), Gaps = 37/161 (22%)
Query: 28 NRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRK 87
++ TPGEL IRG+C MLGYW + +KT+E + D+W RTG
Sbjct: 437 GKLAELNTPGELFIRGYCVMLGYWGEPRKTEEVVDQDKWYRTG----------------- 479
Query: 88 LKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTH 147
D ++ E G+ ++VGR KDMIIRGGENIYP E+E+F+ TH
Sbjct: 480 --------------------DIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELEDFLHTH 519
Query: 148 PNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
P V E GV D+RMGEE+ I+LK + E K+
Sbjct: 520 PKVQEVQVVGVKDDRMGEEICACIRLKSGEESTPEEIKAFC 560
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E G+ ++VGR KDMIIRGGENIYP E+E+F+ THP V E GV D+RMGEE+
Sbjct: 480 DIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELEDFLHTHPKVQEVQVVGVKDDRMGEEI 539
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK + ++I+ FCKGK+S F
Sbjct: 540 CACIRLKSGEESTPEEIKAFCKGKISHF 567
>gi|443673957|ref|ZP_21139000.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
gi|443413383|emb|CCQ17339.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
Length = 538
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 86/161 (53%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHN-NRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD VP G GEL RG+ MLGYWE +KT E I +RW+ TG
Sbjct: 364 LEVKIVDPVLGHTVPRGDAGELCTRGYSVMLGYWEQPEKTAEAIDDERWMHTG------- 416
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ EDGY + GRIKDM+IRGGEN+YP
Sbjct: 417 ------------------------------DIGVMDEDGYVAITGRIKDMVIRGGENVYP 446
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+E+EEF+ THP++L+A GVPD + GEE+ + I++++ A
Sbjct: 447 REVEEFLYTHPDILDAQVIGVPDAKYGEELMVWIRMRDVAA 487
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Query: 392 RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDE 451
R + D V+ EDGY + GRIKDM+IRGGEN+YP+E+EEF+ THP++L+A GVPD
Sbjct: 411 RWMHTGDIGVMDEDGYVAITGRIKDMVIRGGENVYPREVEEFLYTHPDILDAQVIGVPDA 470
Query: 452 RMGEEVGISIKLKE-NAKLNADDIRTFCKGKVSKF 485
+ GEE+ + I++++ A L++ +R FC G+++ +
Sbjct: 471 KYGEELMVWIRMRDVAAPLDSAAVRAFCDGRLAHY 505
>gi|84502154|ref|ZP_01000302.1| acyl-CoA synthase [Oceanicola batsensis HTCC2597]
gi|84389514|gb|EAQ02233.1| acyl-CoA synthase [Oceanicola batsensis HTCC2597]
Length = 585
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 85/163 (52%), Gaps = 38/163 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD IVP GT GEL RG+ M GYWE+ +KT E I D W+ TG
Sbjct: 408 LEVKIVDEVGAIVPPGTQGELCTRGYSVMKGYWEEPEKTAEAIR-DGWMHTG-------- 458
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E+G+ + GR+KDMIIRGGENIYP+
Sbjct: 459 -----------------------------DLAVIDEEGFCTITGRVKDMIIRGGENIYPR 489
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
EIEEF+ +HP V + +G+PD+R+GEEV + E + L A
Sbjct: 490 EIEEFLMSHPQVSDVQVFGIPDKRLGEEVCAWVVATEGSTLEA 532
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+G+ + GR+KDMIIRGGENIYP+EIEEF+ +HP V + +G+PD+R+GEEV
Sbjct: 459 DLAVIDEEGFCTITGRVKDMIIRGGENIYPREIEEFLMSHPQVSDVQVFGIPDKRLGEEV 518
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ E + L A+ +R +C G+++ F
Sbjct: 519 CAWVVATEGSTLEAEALRAYCTGQIAHF 546
>gi|403279572|ref|XP_003931321.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 1 [Saimiri boliviensis boliviensis]
Length = 615
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 83/161 (51%), Gaps = 37/161 (22%)
Query: 28 NRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRK 87
++ TPGEL IRG+C MLGYW + +KT+E + D+W RTG
Sbjct: 450 GKLAELNTPGELFIRGYCVMLGYWGEPRKTEEVVDQDKWYRTG----------------- 492
Query: 88 LKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTH 147
D ++ E G+ ++VGR KDMIIRGGENIYP E+E+F+ TH
Sbjct: 493 --------------------DIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELEDFLHTH 532
Query: 148 PNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
P V E GV D+RMGEE+ I+LK + E K+
Sbjct: 533 PKVQEVQVVGVKDDRMGEEICACIRLKSGEESTPEEIKAFC 573
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E G+ ++VGR KDMIIRGGENIYP E+E+F+ THP V E GV D+RMGEE+
Sbjct: 493 DIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELEDFLHTHPKVQEVQVVGVKDDRMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK + ++I+ FCKGK+S F
Sbjct: 553 CACIRLKSGEESTPEEIKAFCKGKISHF 580
>gi|302538259|ref|ZP_07290601.1| cyclohexanecarboxylate-CoA ligase [Streptomyces sp. C]
gi|302447154|gb|EFL18970.1| cyclohexanecarboxylate-CoA ligase [Streptomyces sp. C]
Length = 545
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 84/161 (52%), Gaps = 38/161 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD VP GTPGEL RG+ MLGYW + QKT E + + W+ TG
Sbjct: 368 LEVKVVDPETGATVPRGTPGELCTRGYSVMLGYWGEPQKTAEAVDGEGWMHTG------- 420
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ DGY + GRIKDM+IRGGEN+YP
Sbjct: 421 ------------------------------DLAVMDADGYLAITGRIKDMVIRGGENLYP 450
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ HP+VL+ GVPD + GEE+ ++++E A+
Sbjct: 451 REIEEFLHGHPDVLDVQVIGVPDAKYGEELMAWVRMREGAE 491
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ DGY + GRIKDM+IRGGEN+YP+EIEEF+ HP+VL+ GVPD + GEE+
Sbjct: 421 DLAVMDADGYLAITGRIKDMVIRGGENLYPREIEEFLHGHPDVLDVQVIGVPDAKYGEEL 480
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSKF 485
++++E A+ L A+ +R +C G+++ F
Sbjct: 481 MAWVRMREGAEPLTAETVRAYCSGRLAHF 509
>gi|119503808|ref|ZP_01625890.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
gi|119460316|gb|EAW41409.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
Length = 558
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 88/171 (51%), Gaps = 37/171 (21%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ KV+D +NR+V G GE+ RG+ M YW D ++T ETI WL +G
Sbjct: 385 EIKVIDQSNRVVAIGEKGEICTRGYSVMREYWNDPERTAETIDEAGWLHSG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + E+GY ++VGRIKDMIIRGGENIYP+E
Sbjct: 436 ----------------------------DLATMDEEGYVRIVGRIKDMIIRGGENIYPRE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
+EEF+ HP + E +G+P E+MGEEV ++L E + E K+ +D
Sbjct: 468 VEEFLYQHPAISEVQVFGIPHEKMGEEVCAWVQLNEGQSMTEDELKAFCND 518
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY ++VGRIKDMIIRGGENIYP+E+EEF+ HP + E +G+P E+MGEEV
Sbjct: 436 DLATMDEEGYVRIVGRIKDMIIRGGENIYPREVEEFLYQHPAISEVQVFGIPHEKMGEEV 495
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++L E + D+++ FC +++ F
Sbjct: 496 CAWVQLNEGQSMTEDELKAFCNDQITHF 523
>gi|426237737|ref|XP_004012814.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 3 [Ovis aries]
Length = 455
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 89/170 (52%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ + TPGEL IRG+C MLGYW + +KT+E IG D+W RTG
Sbjct: 281 EAQIVNMETGTLTELHTPGELCIRGYCVMLGYWGEPRKTEEAIGQDKWYRTG-------- 332
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E G+ ++VGR KDMIIRGGENIYP
Sbjct: 333 -----------------------------DIATMDEQGFCKIVGRSKDMIIRGGENIYPA 363
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F THP V E GV D+RMGEE+ I+LKE K A E K+
Sbjct: 364 ELEDFFHTHPQVQEVQVVGVKDDRMGEEICACIRLKEGEKTTAEEIKAFC 413
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 333 DIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDDRMGEEI 392
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LKE K A++I+ FCKGK+S F
Sbjct: 393 CACIRLKEGEKTTAEEIKAFCKGKISHF 420
>gi|77993368|ref|NP_001030123.1| acyl-CoA synthetase family member 2, mitochondrial precursor
[Rattus norvegicus]
gi|123781622|sp|Q499N5.1|ACSF2_RAT RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|71121982|gb|AAH99826.1| Acyl-CoA synthetase family member 2 [Rattus norvegicus]
Length = 615
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 84/170 (49%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ + PGEL IRG+C M GYW + QKT ET+G DRW RTG
Sbjct: 441 EAQIVNMETGELTKLNMPGELCIRGYCVMQGYWGEPQKTFETVGQDRWYRTG-------- 492
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E G+ ++VGR KDMIIRGGENIYP
Sbjct: 493 -----------------------------DIASMDEQGFCRIVGRSKDMIIRGGENIYPA 523
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F HP V EA GV D+RMGEE+ I+LK E K+
Sbjct: 524 ELEDFFHKHPQVQEAQVVGVKDDRMGEEICACIRLKSGETTTEEEIKAFC 573
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 57/82 (69%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
E G+ ++VGR KDMIIRGGENIYP E+E+F HP V EA GV D+RMGEE+ I+L
Sbjct: 499 EQGFCRIVGRSKDMIIRGGENIYPAELEDFFHKHPQVQEAQVVGVKDDRMGEEICACIRL 558
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
K ++I+ FCKGK+S F
Sbjct: 559 KSGETTTEEEIKAFCKGKISHF 580
>gi|397493196|ref|XP_003817498.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 3 [Pan paniscus]
Length = 572
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 80/159 (50%), Gaps = 37/159 (23%)
Query: 30 IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLK 89
+ TPGEL IRG+C MLGYW + QKT+E + D+W TG
Sbjct: 409 LAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTG------------------- 449
Query: 90 PLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 149
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP
Sbjct: 450 ------------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 491
Query: 150 VLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
V E GV D+RMGEE+ I+LK+ + E K+
Sbjct: 492 VQEVQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 530
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 450 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 509
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 510 CACIRLKDGEETTVEEIKAFCKGKISHF 537
>gi|395764069|ref|ZP_10444738.1| AMP-binding domain protein [Janthinobacterium lividum PAMC 25724]
Length = 559
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 88/175 (50%), Gaps = 42/175 (24%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K++D RIVP G GELL RG+ M GYW D +KT+E I RW+ TG
Sbjct: 382 LEVKIIDAQGRIVPRGEKGELLTRGYSVMQGYWGDPEKTREAIDTARWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ + G+ +VGR KDM+IRGGENIYP+
Sbjct: 434 -----------------------------DLAVIDDKGFCSIVGRSKDMVIRGGENIYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK-----LNAYEDKSIS 188
E+EEF+ HP+VL+ GVPD + GEE+ I L+ + + A+ D I+
Sbjct: 465 EVEEFLYRHPSVLDVQCVGVPDAKYGEELCACIILRPGMQASSEDIRAFCDGQIA 519
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 64/95 (67%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D V+ + G+ +VGR KDM+IRGGENIYP+E+EEF+ HP+VL+ GVPD
Sbjct: 427 ARWMHTGDLAVIDDKGFCSIVGRSKDMVIRGGENIYPREVEEFLYRHPSVLDVQCVGVPD 486
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ GEE+ I L+ + +++DIR FC G+++ +
Sbjct: 487 AKYGEELCACIILRPGMQASSEDIRAFCDGQIAYY 521
>gi|392549460|ref|ZP_10296597.1| AMP-binding domain protein [Pseudoalteromonas rubra ATCC 29570]
Length = 567
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 84/155 (54%), Gaps = 37/155 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D + + P G PGE+ RG+C M GYW+D+ KT+ TI WL +G
Sbjct: 392 EVKIIDESGELAPRGVPGEVCARGYCVMQGYWQDDAKTRATIDAQGWLHSG--------- 442
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ ++GY +VGRIKDMIIRGGENIYP+E
Sbjct: 443 ----------------------------DLGVMDDEGYVTIVGRIKDMIIRGGENIYPRE 474
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
IEE + HP++ +A +G+ DE+ GEEV ++LK
Sbjct: 475 IEEVLYHHPDIQDAAVFGIQDEKYGEEVCAWVQLK 509
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ ++GY +VGRIKDMIIRGGENIYP+EIEE + HP++ +A +G+ DE+ GEEV
Sbjct: 443 DLGVMDDEGYVTIVGRIKDMIIRGGENIYPREIEEVLYHHPDIQDAAVFGIQDEKYGEEV 502
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++LK + I+ + + K+S F
Sbjct: 503 CAWVQLKPEQYTDEQTIKAYLQDKLSYF 530
>gi|149053895|gb|EDM05712.1| hypothetical protein LOC619561, isoform CRA_b [Rattus norvegicus]
Length = 520
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 84/170 (49%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ + PGEL IRG+C M GYW + QKT ET+G DRW RTG
Sbjct: 346 EAQIVNMETGELTKLNMPGELCIRGYCVMQGYWGEPQKTFETVGQDRWYRTG-------- 397
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E G+ ++VGR KDMIIRGGENIYP
Sbjct: 398 -----------------------------DIASMDEQGFCRIVGRSKDMIIRGGENIYPA 428
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F HP V EA GV D+RMGEE+ I+LK E K+
Sbjct: 429 ELEDFFHKHPQVQEAQVVGVKDDRMGEEICACIRLKSGETTTEEEIKAFC 478
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 57/82 (69%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
E G+ ++VGR KDMIIRGGENIYP E+E+F HP V EA GV D+RMGEE+ I+L
Sbjct: 404 EQGFCRIVGRSKDMIIRGGENIYPAELEDFFHKHPQVQEAQVVGVKDDRMGEEICACIRL 463
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
K ++I+ FCKGK+S F
Sbjct: 464 KSGETTTEEEIKAFCKGKISHF 485
>gi|397493198|ref|XP_003817499.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 4 [Pan paniscus]
Length = 640
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 80/159 (50%), Gaps = 37/159 (23%)
Query: 30 IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLK 89
+ TPGEL IRG+C MLGYW + QKT+E + D+W TG
Sbjct: 477 LAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTG------------------- 517
Query: 90 PLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 149
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP
Sbjct: 518 ------------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 559
Query: 150 VLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
V E GV D+RMGEE+ I+LK+ + E K+
Sbjct: 560 VQEVQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 598
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 518 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 577
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 578 CACIRLKDGEETTVEEIKAFCKGKISHF 605
>gi|426237739|ref|XP_004012815.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 4 [Ovis aries]
Length = 572
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 89/170 (52%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ + TPGEL IRG+C MLGYW + +KT+E IG D+W RTG
Sbjct: 398 EAQIVNMETGTLTELHTPGELCIRGYCVMLGYWGEPRKTEEAIGQDKWYRTG-------- 449
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E G+ ++VGR KDMIIRGGENIYP
Sbjct: 450 -----------------------------DIATMDEQGFCKIVGRSKDMIIRGGENIYPA 480
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F THP V E GV D+RMGEE+ I+LKE K A E K+
Sbjct: 481 ELEDFFHTHPQVQEVQVVGVKDDRMGEEICACIRLKEGEKTTAEEIKAFC 530
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 450 DIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDDRMGEEI 509
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LKE K A++I+ FCKGK+S F
Sbjct: 510 CACIRLKEGEKTTAEEIKAFCKGKISHF 537
>gi|426237735|ref|XP_004012813.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 2 [Ovis aries]
Length = 602
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 89/170 (52%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ + TPGEL IRG+C MLGYW + +KT+E IG D+W RTG
Sbjct: 428 EAQIVNMETGTLTELHTPGELCIRGYCVMLGYWGEPRKTEEAIGQDKWYRTG-------- 479
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E G+ ++VGR KDMIIRGGENIYP
Sbjct: 480 -----------------------------DIATMDEQGFCKIVGRSKDMIIRGGENIYPA 510
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F THP V E GV D+RMGEE+ I+LKE K A E K+
Sbjct: 511 ELEDFFHTHPQVQEVQVVGVKDDRMGEEICACIRLKEGEKTTAEEIKAFC 560
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 480 DIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDDRMGEEI 539
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LKE K A++I+ FCKGK+S F
Sbjct: 540 CACIRLKEGEKTTAEEIKAFCKGKISHF 567
>gi|114669320|ref|XP_511878.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 3 [Pan troglodytes]
Length = 572
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 80/159 (50%), Gaps = 37/159 (23%)
Query: 30 IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLK 89
+ TPGEL IRG+C MLGYW + QKT+E + D+W TG
Sbjct: 409 LAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTG------------------- 449
Query: 90 PLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 149
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP
Sbjct: 450 ------------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 491
Query: 150 VLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
V E GV D+RMGEE+ I+LK+ + E K+
Sbjct: 492 VQEVQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 530
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 450 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 509
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 510 CACIRLKDGEETTVEEIKAFCKGKISHF 537
>gi|397493194|ref|XP_003817497.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 2 [Pan paniscus]
Length = 602
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 80/159 (50%), Gaps = 37/159 (23%)
Query: 30 IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLK 89
+ TPGEL IRG+C MLGYW + QKT+E + D+W TG
Sbjct: 439 LAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTG------------------- 479
Query: 90 PLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 149
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP
Sbjct: 480 ------------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 521
Query: 150 VLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
V E GV D+RMGEE+ I+LK+ + E K+
Sbjct: 522 VQEVQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 560
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 480 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 539
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 540 CACIRLKDGEETTVEEIKAFCKGKISHF 567
>gi|15559516|gb|AAH14123.1| Acyl-CoA synthetase family member 2 [Homo sapiens]
Length = 615
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 80/159 (50%), Gaps = 37/159 (23%)
Query: 30 IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLK 89
+ TPGEL IRG+C MLGYW + QKT+E + D+W TG
Sbjct: 452 LAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTG------------------- 492
Query: 90 PLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 149
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP
Sbjct: 493 ------------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 534
Query: 150 VLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
V E GV D+RMGEE+ I+LK+ + E K+
Sbjct: 535 VQEVQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 573
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 493 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 553 CACIRLKDGEETTVEEIKAFCKGKISHF 580
>gi|332848510|ref|XP_003315662.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial [Pan
troglodytes]
Length = 602
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 80/159 (50%), Gaps = 37/159 (23%)
Query: 30 IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLK 89
+ TPGEL IRG+C MLGYW + QKT+E + D+W TG
Sbjct: 439 LAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTG------------------- 479
Query: 90 PLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 149
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP
Sbjct: 480 ------------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 521
Query: 150 VLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
V E GV D+RMGEE+ I+LK+ + E K+
Sbjct: 522 VQEVQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 560
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 480 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 539
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 540 CACIRLKDGEETTVEEIKAFCKGKISHF 567
>gi|397493192|ref|XP_003817496.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 1 [Pan paniscus]
Length = 615
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 80/159 (50%), Gaps = 37/159 (23%)
Query: 30 IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLK 89
+ TPGEL IRG+C MLGYW + QKT+E + D+W TG
Sbjct: 452 LAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTG------------------- 492
Query: 90 PLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 149
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP
Sbjct: 493 ------------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 534
Query: 150 VLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
V E GV D+RMGEE+ I+LK+ + E K+
Sbjct: 535 VQEVQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 573
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 493 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 553 CACIRLKDGEETTVEEIKAFCKGKISHF 580
>gi|332848513|ref|XP_003315663.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial [Pan
troglodytes]
Length = 640
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 80/159 (50%), Gaps = 37/159 (23%)
Query: 30 IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLK 89
+ TPGEL IRG+C MLGYW + QKT+E + D+W TG
Sbjct: 477 LAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTG------------------- 517
Query: 90 PLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 149
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP
Sbjct: 518 ------------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 559
Query: 150 VLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
V E GV D+RMGEE+ I+LK+ + E K+
Sbjct: 560 VQEVQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 598
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 518 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 577
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 578 CACIRLKDGEETTVEEIKAFCKGKISHF 605
>gi|426237733|ref|XP_004012812.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 1 [Ovis aries]
Length = 615
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 89/170 (52%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ + TPGEL IRG+C MLGYW + +KT+E IG D+W RTG
Sbjct: 441 EAQIVNMETGTLTELHTPGELCIRGYCVMLGYWGEPRKTEEAIGQDKWYRTG-------- 492
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E G+ ++VGR KDMIIRGGENIYP
Sbjct: 493 -----------------------------DIATMDEQGFCKIVGRSKDMIIRGGENIYPA 523
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F THP V E GV D+RMGEE+ I+LKE K A E K+
Sbjct: 524 ELEDFFHTHPQVQEVQVVGVKDDRMGEEICACIRLKEGEKTTAEEIKAFC 573
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 493 DIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDDRMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LKE K A++I+ FCKGK+S F
Sbjct: 553 CACIRLKEGEKTTAEEIKAFCKGKISHF 580
>gi|149053894|gb|EDM05711.1| hypothetical protein LOC619561, isoform CRA_a [Rattus norvegicus]
Length = 532
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 84/170 (49%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ + PGEL IRG+C M GYW + QKT ET+G DRW RTG
Sbjct: 358 EAQIVNMETGELTKLNMPGELCIRGYCVMQGYWGEPQKTFETVGQDRWYRTG-------- 409
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E G+ ++VGR KDMIIRGGENIYP
Sbjct: 410 -----------------------------DIASMDEQGFCRIVGRSKDMIIRGGENIYPA 440
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F HP V EA GV D+RMGEE+ I+LK E K+
Sbjct: 441 ELEDFFHKHPQVQEAQVVGVKDDRMGEEICACIRLKSGETTTEEEIKAFC 490
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 57/82 (69%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
E G+ ++VGR KDMIIRGGENIYP E+E+F HP V EA GV D+RMGEE+ I+L
Sbjct: 416 EQGFCRIVGRSKDMIIRGGENIYPAELEDFFHKHPQVQEAQVVGVKDDRMGEEICACIRL 475
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
K ++I+ FCKGK+S F
Sbjct: 476 KSGETTTEEEIKAFCKGKISHF 497
>gi|156151445|ref|NP_079425.3| acyl-CoA synthetase family member 2, mitochondrial precursor [Homo
sapiens]
gi|166198367|sp|Q96CM8.2|ACSF2_HUMAN RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|10436885|dbj|BAB14930.1| unnamed protein product [Homo sapiens]
gi|15082296|gb|AAH12053.1| Acyl-CoA synthetase family member 2 [Homo sapiens]
gi|37182442|gb|AAQ89023.1| AVYV493 [Homo sapiens]
gi|119615018|gb|EAW94612.1| hypothetical protein FLJ20920 [Homo sapiens]
Length = 615
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 80/159 (50%), Gaps = 37/159 (23%)
Query: 30 IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLK 89
+ TPGEL IRG+C MLGYW + QKT+E + D+W TG
Sbjct: 452 LAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTG------------------- 492
Query: 90 PLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 149
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP
Sbjct: 493 ------------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 534
Query: 150 VLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
V E GV D+RMGEE+ I+LK+ + E K+
Sbjct: 535 VQEVQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 573
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 493 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 553 CACIRLKDGEETTVEEIKAFCKGKISHF 580
>gi|194379790|dbj|BAG58247.1| unnamed protein product [Homo sapiens]
Length = 602
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 80/159 (50%), Gaps = 37/159 (23%)
Query: 30 IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLK 89
+ TPGEL IRG+C MLGYW + QKT+E + D+W TG
Sbjct: 439 LAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTG------------------- 479
Query: 90 PLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 149
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP
Sbjct: 480 ------------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 521
Query: 150 VLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
V E GV D+RMGEE+ I+LK+ + E K+
Sbjct: 522 VQEVQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 560
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 480 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 539
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 540 CACIRLKDGEETTVEEIKAFCKGKISHF 567
>gi|149377184|ref|ZP_01894932.1| acyl-CoA synthase [Marinobacter algicola DG893]
gi|149358483|gb|EDM46957.1| acyl-CoA synthase [Marinobacter algicola DG893]
Length = 562
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 92/177 (51%), Gaps = 40/177 (22%)
Query: 4 MNPTDLQFSTLSSSS--FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKET 60
++P + Q +T+ + + K+VD N +VP G GEL RG+ ML YW +E+KT E
Sbjct: 367 LDPFEKQVTTVGRTQPHLETKIVDPGNGNVVPRGEIGELCTRGYSVMLKYWNNEEKTSEA 426
Query: 61 IGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQV 120
I W+ TG D + EDGY Q+
Sbjct: 427 IDGAGWMHTG-------------------------------------DLATMDEDGYIQI 449
Query: 121 VGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
VGRIKDM+IRGGENIYPKEIEEF+ THP + E G+PD++ GEE+ +KL +A
Sbjct: 450 VGRIKDMVIRGGENIYPKEIEEFLYTHPAIEEVQVTGIPDDKYGEELIAWVKLNPDA 506
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 376 KYLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
KY EE + + D + EDGY Q+VGRIKDM+IRGGENIYPKEIEEF+
Sbjct: 415 KYWNNEEKTSEAIDGAGWMHTGDLATMDEDGYIQIVGRIKDMVIRGGENIYPKEIEEFLY 474
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
THP + E G+PD++ GEE+ +KL +A + D++R FCKGK++ F
Sbjct: 475 THPAIEEVQVTGIPDDKYGEELIAWVKLNPDADPVTGDELREFCKGKIAHF 525
>gi|240974267|ref|XP_002401840.1| acyl-CoA synthetase, putative [Ixodes scapularis]
gi|215491074|gb|EEC00715.1| acyl-CoA synthetase, putative [Ixodes scapularis]
Length = 338
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 91/178 (51%), Gaps = 40/178 (22%)
Query: 4 MNPTDLQFSTLSS--SSFQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKET 60
++P +F+T+ + + K+ D + P PGE+ +RGH LGY+ DE+KT+E
Sbjct: 146 LDPESKRFNTVGRPLAFVELKIADPTTGVETPVNEPGEIWVRGHNIFLGYYGDEEKTQEA 205
Query: 61 IGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQV 120
I P RW +TG D L EDGY V
Sbjct: 206 ITPARWYKTG-------------------------------------DLGTLDEDGYLNV 228
Query: 121 VGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+GR+KDM+IRGGENIYP EIE + THP V E G+PDERMGEE+ + LK +AK
Sbjct: 229 IGRLKDMVIRGGENIYPIEIEAVLNTHPAVEECLVIGLPDERMGEELCAWVVLKPDAK 286
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L EDGY V+GR+KDM+IRGGENIYP EIE + THP V E G+PDERMGEE+
Sbjct: 216 DLGTLDEDGYLNVIGRLKDMVIRGGENIYPIEIEAVLNTHPAVEECLVIGLPDERMGEEL 275
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ LK +AK +++ FCK K+S F
Sbjct: 276 CAWVVLKPDAKATDAELQEFCKVKLSHF 303
>gi|114669318|ref|XP_001169992.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 2 [Pan troglodytes]
gi|410209622|gb|JAA02030.1| acyl-CoA synthetase family member 2 [Pan troglodytes]
gi|410249930|gb|JAA12932.1| acyl-CoA synthetase family member 2 [Pan troglodytes]
gi|410297578|gb|JAA27389.1| acyl-CoA synthetase family member 2 [Pan troglodytes]
gi|410331767|gb|JAA34830.1| acyl-CoA synthetase family member 2 [Pan troglodytes]
Length = 615
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 80/159 (50%), Gaps = 37/159 (23%)
Query: 30 IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLK 89
+ TPGEL IRG+C MLGYW + QKT+E + D+W TG
Sbjct: 452 LAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTG------------------- 492
Query: 90 PLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 149
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP
Sbjct: 493 ------------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 534
Query: 150 VLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
V E GV D+RMGEE+ I+LK+ + E K+
Sbjct: 535 VQEVQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 573
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 493 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 553 CACIRLKDGEETTVEEIKAFCKGKISHF 580
>gi|403279578|ref|XP_003931324.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 4 [Saimiri boliviensis boliviensis]
Length = 645
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 89/170 (52%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++++ ++ TPGEL IRG+C MLGYW + +KT+E + D+W RTG
Sbjct: 471 EARIMNMEAGKLAELNTPGELFIRGYCVMLGYWGEPRKTEEVVDQDKWYRTG-------- 522
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D ++ E G+ ++VGR KDMIIRGGENIYP
Sbjct: 523 -----------------------------DIAMMDEQGFCKIVGRSKDMIIRGGENIYPV 553
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F+ THP V E GV D+RMGEE+ I+LK + E K+
Sbjct: 554 ELEDFLHTHPKVQEVQVVGVKDDRMGEEICACIRLKSGEESTPEEIKAFC 603
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E G+ ++VGR KDMIIRGGENIYP E+E+F+ THP V E GV D+RMGEE+
Sbjct: 523 DIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELEDFLHTHPKVQEVQVVGVKDDRMGEEI 582
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK + ++I+ FCKGK+S F
Sbjct: 583 CACIRLKSGEESTPEEIKAFCKGKISHF 610
>gi|329940648|ref|ZP_08289929.1| AMP-binding domain protein [Streptomyces griseoaurantiacus M045]
gi|329300709|gb|EGG44606.1| AMP-binding domain protein [Streptomyces griseoaurantiacus M045]
Length = 548
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 81/158 (51%), Gaps = 38/158 (24%)
Query: 19 FQAKVVDHNNRIV-PFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + P GT GEL RG+ MLGYWE+ KT E + RW+ TG
Sbjct: 370 IEVKVVDPVTGVTQPRGTSGELCTRGYSVMLGYWEEPAKTAEVVDAGRWMHTG------- 422
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY ++VGRIKDMIIRGGEN+YP
Sbjct: 423 ------------------------------DLAVMREDGYVEIVGRIKDMIIRGGENVYP 452
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 175
+EIEEF+ HP + + GVP ER GEEV + +E
Sbjct: 453 REIEEFLYAHPKIADVQVVGVPHERYGEEVLACVIPRE 490
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
AGR + D V+REDGY ++VGRIKDMIIRGGEN+YP+EIEEF+ HP + + GVP
Sbjct: 415 AGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENVYPREIEEFLYAHPKIADVQVVGVP 474
Query: 450 DERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
ER GEEV + +E ++R FC+G+++ +
Sbjct: 475 HERYGEEVLACVIPREAGDPPTLQEVRAFCEGRLAHY 511
>gi|194376742|dbj|BAG57517.1| unnamed protein product [Homo sapiens]
Length = 640
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 80/159 (50%), Gaps = 37/159 (23%)
Query: 30 IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLK 89
+ TPGEL IRG+C MLGYW + QKT+E + D+W TG
Sbjct: 477 LAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTG------------------- 517
Query: 90 PLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 149
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP
Sbjct: 518 ------------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 559
Query: 150 VLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
V E GV D+RMGEE+ I+LK+ + E K+
Sbjct: 560 VQEVQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 598
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 518 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 577
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 578 CACIRLKDGEETTVEEIKAFCKGKISHF 605
>gi|399545625|ref|YP_006558933.1| acyl-CoA synthetase YngI [Marinobacter sp. BSs20148]
gi|399160957|gb|AFP31520.1| Putative acyl-CoA synthetase YngI [Marinobacter sp. BSs20148]
Length = 543
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 95/176 (53%), Gaps = 40/176 (22%)
Query: 5 NPTDLQFSTLSSSS--FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + Q +T+ + + K+V+ N IV GT GEL RG+ ML YW +++KT+ETI
Sbjct: 349 DPFEKQVTTVGRTQPHLENKIVEPANGNIVARGTIGELCTRGYSVMLKYWNNDEKTRETI 408
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
W+ TG D + EDGY Q+V
Sbjct: 409 DDAGWMHTG-------------------------------------DLATMDEDGYIQIV 431
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
GRIKDM+IRGGENIYPKE+EEF+ THP++ E G+P+E+ GEE+ +KL+ +A
Sbjct: 432 GRIKDMVIRGGENIYPKEVEEFLYTHPSIEEVQVTGIPNEKFGEELVAWVKLRPDA 487
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDGY Q+VGRIKDM+IRGGENIYPKE+EEF+ THP++ E G+P+E+ GEE+
Sbjct: 418 DLATMDEDGYIQIVGRIKDMVIRGGENIYPKEVEEFLYTHPSIEEVQVTGIPNEKFGEEL 477
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
+KL+ +A ++ADD+ FCKGK++ +
Sbjct: 478 VAWVKLRPDADSVDADDLIAFCKGKIAHY 506
>gi|343962485|dbj|BAK62830.1| hypothetical protein [Pan troglodytes]
Length = 615
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 80/159 (50%), Gaps = 37/159 (23%)
Query: 30 IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLK 89
+ TPGEL IRG+C MLGYW + QKT+E + D+W TG
Sbjct: 452 LAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTG------------------- 492
Query: 90 PLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 149
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP
Sbjct: 493 ------------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 534
Query: 150 VLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
V E GV D+RMGEE+ I+LK+ + E K+
Sbjct: 535 VQEVQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 573
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 493 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 553 CACIRLKDGEETTVEEIKAFCKGKISHF 580
>gi|319795049|ref|YP_004156689.1| AMP-dependent synthetase and ligase [Variovorax paradoxus EPS]
gi|315597512|gb|ADU38578.1| AMP-dependent synthetase and ligase [Variovorax paradoxus EPS]
Length = 506
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 38/187 (20%)
Query: 4 MNPTDLQFSTLS-SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
M+P + ++ +S A VVD VP GT GEL+IRG MLGY+++E+ T+ +
Sbjct: 320 MDPAARKLGSVGRASGCMAGVVDAELAAVPDGTTGELVIRGPNVMLGYYKNEEATRASFT 379
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
PD WLRTG + + GFF+ V G
Sbjct: 380 PDGWLRTGDLG---------------------HRDEDGFFF----------------VTG 402
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
RIK++II+GGENI P+EI+E + HP VLEA A GVPD G+E+G+ I L+E
Sbjct: 403 RIKELIIKGGENIAPREIDEALLRHPAVLEAAAVGVPDRHYGQEIGVCIVLREGCACTED 462
Query: 183 EDKSISS 189
E ++ S+
Sbjct: 463 ELRAFSA 469
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 55/82 (67%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
EDG+ V GRIK++II+GGENI P+EI+E + HP VLEA A GVPD G+E+G+ I L
Sbjct: 394 EDGFFFVTGRIKELIIKGGENIAPREIDEALLRHPAVLEAAAVGVPDRHYGQEIGVCIVL 453
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
+E D++R F + ++
Sbjct: 454 REGCACTEDELRAFSATALGRY 475
>gi|359425223|ref|ZP_09216323.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
gi|358239311|dbj|GAB05905.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
Length = 551
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 91/177 (51%), Gaps = 40/177 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + K++D VP G GE RG+ M GYW+ KT E I
Sbjct: 356 DPLELRVGTVGRVGPHLEIKMIDPVTGETVPRGRVGEFCTRGYSVMKGYWDQPDKTAEAI 415
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+RTG D V+RE+GY ++
Sbjct: 416 DADGWMRTG-------------------------------------DLAVMRENGYVEIT 438
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPD+ GEE+ I+L++ A
Sbjct: 439 GRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDDSYGEELMAWIRLRDGAS 495
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 95/192 (49%), Gaps = 27/192 (14%)
Query: 294 PVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITPALKGLYHFKKWMNPKFSTT 353
PV+++ DPLE+ + V + KM V + G +F T
Sbjct: 347 PVSMQTRTDDPLELRVGTVGRVGPHLEIKMIDPVTGETVPRGRVG----------EFCTR 396
Query: 354 TRKVALTWPNSMDSEARIYHYKKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGR 413
V + + D A ++R D V+RE+GY ++ GR
Sbjct: 397 GYSVMKGYWDQPDKTAEAIDADGWMRT----------------GDLAVMRENGYVEITGR 440
Query: 414 IKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LNAD 472
IKDM+IRGGENIYP+EIEEF+ THP++L+A GVPD+ GEE+ I+L++ A L +
Sbjct: 441 IKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDDSYGEELMAWIRLRDGASGLTVE 500
Query: 473 DIRTFCKGKVSK 484
+R F GK+++
Sbjct: 501 QVREFATGKIAR 512
>gi|300692553|ref|YP_003753548.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum PSI07]
gi|299079613|emb|CBJ52291.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum PSI07]
gi|344168821|emb|CCA81133.1| long-chain-fatty-acid-CoA ligase [blood disease bacterium R229]
Length = 571
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 90/188 (47%), Gaps = 40/188 (21%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ Q K+VD +VP G GEL +G+ MLGYW+DE KT E+I
Sbjct: 376 DPLDKRVTTVGRIQPHLQVKLVDGAGEVVPVGEKGELCTKGYSVMLGYWDDEAKTAESIR 435
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+RTG D DGY +VG
Sbjct: 436 -DGWMRTG-------------------------------------DLATFDVDGYCNIVG 457
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK +
Sbjct: 458 RVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLKPGQQATEE 517
Query: 183 EDKSISSD 190
E + D
Sbjct: 518 EIREFCKD 525
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 56/81 (69%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY +VGR+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK
Sbjct: 450 DGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLK 509
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+ ++IR FCK +++ +
Sbjct: 510 PGQQATEEEIREFCKDQIAHY 530
>gi|194374009|dbj|BAG62317.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 79/156 (50%), Gaps = 37/156 (23%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
TPGEL IRG+C MLGYW + QKT+E + D+W TG
Sbjct: 295 LNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTG---------------------- 332
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E
Sbjct: 333 ---------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQE 377
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
GV D+RMGEE+ I+LK+ + E K+
Sbjct: 378 VQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 413
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 333 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 392
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 393 CACIRLKDGEETTVEEIKAFCKGKISHF 420
>gi|29828572|ref|NP_823206.1| AMP-binding domain protein [Streptomyces avermitilis MA-4680]
gi|29605676|dbj|BAC69741.1| putative acyl-CoA synthetase [Streptomyces avermitilis MA-4680]
Length = 540
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 80/150 (53%), Gaps = 38/150 (25%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + VP GT GEL RG+ MLGYW++ +KT E + RW+ TG
Sbjct: 363 IEVKVVDPAGGVTVPRGTAGELCTRGYSVMLGYWDEPEKTAEAVDAGRWMHTG------- 415
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+RE+GY ++VGRIKDMIIRGGENIYP
Sbjct: 416 ------------------------------DLAVMRENGYVEIVGRIKDMIIRGGENIYP 445
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
+EIEEF+ HP + + GVP ER GEEV
Sbjct: 446 REIEEFLYGHPKIADVQVVGVPHERYGEEV 475
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E AGR + D V+RE+GY ++VGRIKDMIIRGGENIYP+EIEEF+
Sbjct: 395 YWDEPEKTAEAVDAGRWMHTGDLAVMRENGYVEIVGRIKDMIIRGGENIYPREIEEFLYG 454
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
HP + + GVP ER GEEV + ++ A +++ FC G+++ +
Sbjct: 455 HPKIADVQVVGVPHERYGEEVLACVIPRDPADPPTLEELWAFCDGQLAHY 504
>gi|426347594|ref|XP_004041434.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Gorilla gorilla gorilla]
Length = 652
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 79/156 (50%), Gaps = 37/156 (23%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
TPGEL IRG+C MLGYW + QKT+E + D+W TG
Sbjct: 492 LNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTG---------------------- 529
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E
Sbjct: 530 ---------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQE 574
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
GV D+RMGEE+ I+LK+ + E K+
Sbjct: 575 VQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 610
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 530 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 589
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 590 CACIRLKDGEETTVEEIKAFCKGKISHF 617
>gi|304309908|ref|YP_003809506.1| AMP-binding protein [gamma proteobacterium HdN1]
gi|301795641|emb|CBL43840.1| AMP-binding family protein [gamma proteobacterium HdN1]
Length = 574
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 90/174 (51%), Gaps = 39/174 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + ST+ S + K+VD R+VP G GEL RG+ M GYW D +KT +TI
Sbjct: 374 SPLEKRVSTVGRVSPHLEVKIVDTAGRVVPIGETGELCCRGYSVMQGYWGDREKTADTID 433
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
WL +G D V+ +GY +VVG
Sbjct: 434 LANWLHSG-------------------------------------DLAVMDAEGYVKVVG 456
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
RIKDMIIRGGEN+YP+E+EEF+ TH + + +G+P E+ GEEV I+L+E
Sbjct: 457 RIKDMIIRGGENVYPREVEEFLYTHEAIQDVQVFGIPHEKYGEEVVAWIQLREG 510
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +GY +VVGRIKDMIIRGGEN+YP+E+EEF+ TH + + +G+P E+ GEEV
Sbjct: 442 DLAVMDAEGYVKVVGRIKDMIIRGGENVYPREVEEFLYTHEAIQDVQVFGIPHEKYGEEV 501
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSKF 485
I+L+E + ++IR +CK K++ F
Sbjct: 502 VAWIQLREGFGHVTPENIRDYCKDKITHF 530
>gi|421501703|ref|ZP_15948660.1| AMP-binding domain protein [Pseudomonas mendocina DLHK]
gi|400347446|gb|EJO95799.1| AMP-binding domain protein [Pseudomonas mendocina DLHK]
Length = 563
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 93/179 (51%), Gaps = 39/179 (21%)
Query: 5 NPTDLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P +L+ +++ + + K+VD +VP G GEL RG+ MLGYW +++ T+E+I
Sbjct: 366 DPLELRVASVGRTQPHLETKLVDEQGNVVPRGQIGELCTRGYSVMLGYWNNQEATQESID 425
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
+W+ +G D V+ E GY ++VG
Sbjct: 426 EAKWMHSG-------------------------------------DLAVMDEAGYLKIVG 448
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
R KDMIIRGGENIYP+EIEEF+ THP V + G+PD + GEEV +KL + L A
Sbjct: 449 RSKDMIIRGGENIYPREIEEFLFTHPAVADVQVIGIPDSKYGEEVAAWVKLHPDQVLTA 507
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+EIEEF+ THP V + G+PD + GEEV
Sbjct: 434 DLAVMDEAGYLKIVGRSKDMIIRGGENIYPREIEEFLFTHPAVADVQVIGIPDSKYGEEV 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+KL + L A+ + +CKG+++ F
Sbjct: 494 AAWVKLHPDQVLTAEALAEYCKGRIAHF 521
>gi|453364097|dbj|GAC80184.1| putative fatty-acid--CoA ligase [Gordonia malaquae NBRC 108250]
Length = 548
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 92/174 (52%), Gaps = 40/174 (22%)
Query: 8 DLQFSTLS--SSSFQAKVVDHNNR-IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPD 64
DL+ T+ + K+VD R ++P G GE RG+ M GYW + +KT + I D
Sbjct: 357 DLRVGTVGRVGPHLEIKIVDPVTREVLPRGETGEFCTRGYSVMQGYWNEPEKTADAIDAD 416
Query: 65 RWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRI 124
W+RTG D V+ +DGY ++ GRI
Sbjct: 417 GWMRTG-------------------------------------DLGVMGDDGYARITGRI 439
Query: 125 KDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
KDM+IRGGENIYP+EIEEF+ THP++++A GVPDE+ GEE+ +++++ A
Sbjct: 440 KDMVIRGGENIYPREIEEFLYTHPDIVDAQVIGVPDEKYGEELMAWVRVRDGAA 493
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +DGY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++++A GVPDE+ GEE+
Sbjct: 423 DLGVMGDDGYARITGRIKDMVIRGGENIYPREIEEFLYTHPDIVDAQVIGVPDEKYGEEL 482
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSK 484
+++++ A L+AD +R F G +S+
Sbjct: 483 MAWVRVRDGAAPLDADAVREFATGHISR 510
>gi|421749451|ref|ZP_16186888.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator HPC(L)]
gi|409771687|gb|EKN53910.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator HPC(L)]
Length = 563
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 83/172 (48%), Gaps = 38/172 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
Q K+VD ++VP G GEL RG+ MLGYWED+ +T+E I D W+ TG
Sbjct: 384 LQCKIVDETGQVVPVGATGELCTRGYSVMLGYWEDDARTREAIR-DGWMHTG-------- 434
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E GY +VGR+KDM+IRGGEN+YP+
Sbjct: 435 -----------------------------DLATIDEQGYCNIVGRVKDMVIRGGENLYPR 465
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
EIEEF+ HP V +GVPD + GEE+ I LK E + D
Sbjct: 466 EIEEFLFRHPKVQAVQVFGVPDPKYGEELCAWIVLKPGQSATEDEIREFCRD 517
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY +VGR+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEE+
Sbjct: 435 DLATIDEQGYCNIVGRVKDMVIRGGENLYPREIEEFLFRHPKVQAVQVFGVPDPKYGEEL 494
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I LK D+IR FC+ +++ +
Sbjct: 495 CAWIVLKPGQSATEDEIREFCRDQIAHY 522
>gi|410902581|ref|XP_003964772.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Takifugu rubripes]
Length = 904
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 38/168 (22%)
Query: 20 QAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD + VP GT GEL+IRG+C M GYW D KT E I +W +TG
Sbjct: 728 EAKIVDPVTGQTVPLGTSGELMIRGYCVMKGYWNDPVKTSEAITDGQWYKTG-------- 779
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L GY Q+ GRIKD+IIRGGENIYP
Sbjct: 780 -----------------------------DTASLNSLGYCQIEGRIKDLIIRGGENIYPA 810
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
EIE+F+ HP + E GV DER+GE+V I+LK + E K+
Sbjct: 811 EIEQFLFQHPKIQEVQVVGVKDERLGEQVCACIRLKNGQSSSPEEIKA 858
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L GY Q+ GRIKD+IIRGGENIYP EIE+F+ HP + E GV DER+GE+V
Sbjct: 780 DTASLNSLGYCQIEGRIKDLIIRGGENIYPAEIEQFLFQHPKIQEVQVVGVKDERLGEQV 839
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK + ++I+ FCKG++S F
Sbjct: 840 CACIRLKNGQSSSPEEIKAFCKGQISHF 867
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 66/135 (48%), Gaps = 38/135 (28%)
Query: 20 QAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AKVVD + VP GT GEL+IRG+C M GYW D KT E I +W +TG
Sbjct: 361 EAKVVDPVTGQTVPLGTSGELMIRGYCVMKGYWNDPVKTSEAITDGQWYKTG-------- 412
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L GY Q+ GRIKD+IIRGGENIYP
Sbjct: 413 -----------------------------DTASLNSLGYCQIEGRIKDLIIRGGENIYPA 443
Query: 139 EIEEFIQTHPNVLEA 153
EIE+F+ HP + E
Sbjct: 444 EIEQFLFQHPKIQEV 458
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 32/46 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 443
D L GY Q+ GRIKD+IIRGGENIYP EIE+F+ HP + E
Sbjct: 413 DTASLNSLGYCQIEGRIKDLIIRGGENIYPAEIEQFLFQHPKIQEV 458
>gi|172059174|ref|YP_001806826.1| AMP-binding domain-containing protein [Burkholderia ambifaria
MC40-6]
gi|171991691|gb|ACB62610.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MC40-6]
Length = 575
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 84/162 (51%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD RIVP G GEL +G+ MLGYW+D+ KT E + D W+ TG
Sbjct: 396 LEVKIVDPEGRIVPVGATGELCTKGYSVMLGYWDDDAKTHEVL-VDGWMHTG-------- 446
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L DGY +VGR+KDM+IRGGEN+YP+
Sbjct: 447 -----------------------------DLATLDADGYCNIVGRLKDMVIRGGENVYPR 477
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + A +GVPD + GEE+ I L+ + +++
Sbjct: 478 EIEEFLFRHPKIQSAQVFGVPDAKYGEELCAWIVLRADEQMS 519
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L DGY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + A +GVPD + GEE+
Sbjct: 447 DLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDAKYGEEL 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + +++ DD+R FC G+++ +
Sbjct: 507 CAWIVLRADEQMSEDDVRAFCNGQIAHY 534
>gi|300705200|ref|YP_003746803.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum CFBP2957]
gi|299072864|emb|CBJ44220.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum CFBP2957]
Length = 571
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 90/186 (48%), Gaps = 40/186 (21%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ Q K+VD +VP G GEL +G+ MLGYW+DE KT E+I
Sbjct: 376 DPLDKRVTTVGRIQPHLQVKLVDGAGEVVPVGEKGELCTKGYSVMLGYWDDEAKTAESIH 435
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+RTG D DGY +VG
Sbjct: 436 -DGWMRTG-------------------------------------DLATFDADGYCNIVG 457
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK +
Sbjct: 458 RVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLKPGQQATEE 517
Query: 183 EDKSIS 188
E ++
Sbjct: 518 EIRAFC 523
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 57/81 (70%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY +VGR+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK
Sbjct: 450 DGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLK 509
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+ ++IR FC+G+++ +
Sbjct: 510 PGQQATEEEIRAFCQGQIAHY 530
>gi|332262429|ref|XP_003280265.1| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA synthetase family member
2, mitochondrial [Nomascus leucogenys]
Length = 721
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 79/154 (51%), Gaps = 37/154 (24%)
Query: 35 TPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQ 94
TPGEL IRG+C MLGYW + QKT+E + D+W TG
Sbjct: 563 TPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTG------------------------ 598
Query: 95 QQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAY 154
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E
Sbjct: 599 -------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQ 645
Query: 155 AYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
GV D+RMGEE+ I+LK+ + E K+
Sbjct: 646 VVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 679
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 599 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 658
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGKVS F
Sbjct: 659 CACIRLKDGEETTVEEIKAFCKGKVSHF 686
>gi|332662713|ref|YP_004445501.1| long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
gi|332331527|gb|AEE48628.1| Long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
Length = 567
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 88/182 (48%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P + Q ST+ + K++D R VP G PGEL RG+ MLGYW +E T+ I
Sbjct: 367 TPLEKQVSTVGQIHPHLEVKIIDPETGRTVPRGIPGELCTRGYSVMLGYWNNETATRNAI 426
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
RW+ TG D + E+GY ++V
Sbjct: 427 DKARWMHTG-------------------------------------DLATMDEEGYVKIV 449
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIKDMIIRGGENIYP+EIEEF+ THP + + GVPD + E V I++KE L
Sbjct: 450 GRIKDMIIRGGENIYPREIEEFLYTHPKISDVQVIGVPDAKYVEAVMAWIRVKEGETLTV 509
Query: 182 YE 183
E
Sbjct: 510 EE 511
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 64/95 (67%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D + E+GY ++VGRIKDMIIRGGENIYP+EIEEF+ THP + + GVPD
Sbjct: 429 ARWMHTGDLATMDEEGYVKIVGRIKDMIIRGGENIYPREIEEFLYTHPKISDVQVIGVPD 488
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ E V I++KE L ++++ +C+G+++ +
Sbjct: 489 AKYVEAVMAWIRVKEGETLTVEEVQAYCQGQIAHY 523
>gi|421889438|ref|ZP_16320475.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum K60-1]
gi|378965202|emb|CCF97223.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum K60-1]
Length = 571
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 90/186 (48%), Gaps = 40/186 (21%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ Q K+VD +VP G GEL +G+ MLGYW+DE KT E+I
Sbjct: 376 DPLDKRVTTVGRIQPHLQVKLVDGAGEVVPVGEKGELCTKGYSVMLGYWDDEAKTAESIH 435
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+RTG D DGY +VG
Sbjct: 436 -DGWMRTG-------------------------------------DLATFDADGYCNIVG 457
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK +
Sbjct: 458 RVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLKPGQQATEE 517
Query: 183 EDKSIS 188
E ++
Sbjct: 518 EIRAFC 523
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 57/81 (70%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY +VGR+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK
Sbjct: 450 DGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLK 509
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+ ++IR FC+G+++ +
Sbjct: 510 PGQQATEEEIRAFCQGQIAHY 530
>gi|359771954|ref|ZP_09275394.1| putative fatty-acid--CoA ligase [Gordonia effusa NBRC 100432]
gi|359310909|dbj|GAB18172.1| putative fatty-acid--CoA ligase [Gordonia effusa NBRC 100432]
Length = 547
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 87/173 (50%), Gaps = 38/173 (21%)
Query: 19 FQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD VP GTPGE RG+ M GYW +KT E + + W+ TG
Sbjct: 370 LEIKVVDPVTGETVPRGTPGEFCTRGYSVMQGYWNQPEKTAEVLDAEGWMHTG------- 422
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D VL ++GY Q+ GRIKDM+IRGGENIYP
Sbjct: 423 ------------------------------DIAVLADNGYVQITGRIKDMVIRGGENIYP 452
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
+EIEEF+ THP++L+A GVPD + GEE+ ++L++ ED +D
Sbjct: 453 REIEEFLYTHPDILDAQVIGVPDAKYGEELMAWVRLRDGVADFTVEDLRTFAD 505
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D VL ++GY Q+ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPD + GEE+
Sbjct: 423 DIAVLADNGYVQITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDAKYGEEL 482
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSK 484
++L++ A +D+RTF G++++
Sbjct: 483 MAWVRLRDGVADFTVEDLRTFADGQIAR 510
>gi|407701339|ref|YP_006826126.1| AMP-binding protein [Alteromonas macleodii str. 'Black Sea 11']
gi|407250486|gb|AFT79671.1| AMP-binding domain protein [Alteromonas macleodii str. 'Black Sea
11']
Length = 579
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 84/161 (52%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D V G PGE+ RG+C M GYW DE KTK TI + WL +G
Sbjct: 399 EVKIIDAQGNTVSIGEPGEICARGYCVMKGYWGDEVKTKATIDDEGWLHSG--------- 449
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + E+GY +VGRIKDMIIRGGENIYP+E
Sbjct: 450 ----------------------------DLGEMDEEGYVTIVGRIKDMIIRGGENIYPRE 481
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + H +V +A +G+PD + GE+V + IK KEN ++
Sbjct: 482 IEEVLYQHQDVSDAAVFGIPDNKYGEQVCLWIKAKENRHID 522
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 61/84 (72%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ E+GY +VGRIKDMIIRGGENIYP+EIEE + H +V +A +G+PD + GE+V + I
Sbjct: 454 MDEEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHQDVSDAAVFGIPDNKYGEQVCLWI 513
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
K KEN ++ + IR + K K++ F
Sbjct: 514 KAKENRHIDEEQIRDYLKSKLAYF 537
>gi|374370611|ref|ZP_09628612.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
gi|373097896|gb|EHP39016.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
Length = 578
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 90/174 (51%), Gaps = 40/174 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + KVVD + +IVP G GEL RG+ MLGYW+DE +T+E+I
Sbjct: 383 DPLDKRVATVGRVQPHLECKVVDTDGQIVPVGATGELCTRGYSVMLGYWDDETRTRESIR 442
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + +GY +VG
Sbjct: 443 -DGWMHTG-------------------------------------DLATIDTEGYCNIVG 464
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
R+KDM+IRGGEN+YP+E+EEF+ HP V +GVPD + GEE+ + LK+
Sbjct: 465 RVKDMLIRGGENVYPREVEEFLFRHPKVQSVQVFGVPDPKYGEEICAWVVLKQG 518
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGR+KDM+IRGGEN+YP+E+EEF+ HP V +GVPD + GEE+
Sbjct: 450 DLATIDTEGYCNIVGRVKDMLIRGGENVYPREVEEFLFRHPKVQSVQVFGVPDPKYGEEI 509
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ LK+ ++I FC+ +++ +
Sbjct: 510 CAWVVLKQGQGATEEEICDFCRDQIAHY 537
>gi|410646272|ref|ZP_11356725.1| fatty-acyl-CoA synthase [Glaciecola agarilytica NO2]
gi|410134212|dbj|GAC05124.1| fatty-acyl-CoA synthase [Glaciecola agarilytica NO2]
Length = 564
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 82/165 (49%), Gaps = 37/165 (22%)
Query: 17 SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTS 76
S + K+VD +NR++P G GE+ RG+ M GYW D +T ETI WL +G
Sbjct: 381 SRIEVKLVDEHNRVIPIGERGEVCTRGYSVMRGYWNDPSRTAETIDSGGWLHSG------ 434
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
D ++ EDGY +VGR KDMIIRGGENIY
Sbjct: 435 -------------------------------DIGIMDEDGYVTIVGRSKDMIIRGGENIY 463
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
PKEIEEF+ THP V + +G+P GEEV I LK + A
Sbjct: 464 PKEIEEFLYTHPAVQDIQVFGIPHADFGEEVCAWICLKPGSSAAA 508
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 61/96 (63%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
+G + D ++ EDGY +VGR KDMIIRGGENIYPKEIEEF+ THP V + +G+P
Sbjct: 427 SGGWLHSGDIGIMDEDGYVTIVGRSKDMIIRGGENIYPKEIEEFLYTHPAVQDIQVFGIP 486
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
GEEV I LK + A DI FCK +++ F
Sbjct: 487 HADFGEEVCAWICLKPGSSAAAKDITDFCKNQIAHF 522
>gi|299067998|emb|CBJ39212.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum CMR15]
Length = 571
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 86/172 (50%), Gaps = 40/172 (23%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ Q K+VD +VP G GEL +G+ MLGYW+DE KT E+I
Sbjct: 376 DPLDKRVTTVGRVQPHLQVKLVDGAGEVVPVGEKGELCTKGYSVMLGYWDDEAKTAESI- 434
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+RTG D DGY +VG
Sbjct: 435 LDGWMRTG-------------------------------------DLATFDADGYCNIVG 457
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
R+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK
Sbjct: 458 RVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLK 509
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 57/81 (70%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY +VGR+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK
Sbjct: 450 DGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLK 509
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+ ++IR FC+G+++ +
Sbjct: 510 PGQQATQEEIREFCQGQIAHY 530
>gi|294632131|ref|ZP_06710691.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292835464|gb|EFF93813.1| conserved hypothetical protein [Streptomyces sp. e14]
Length = 541
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 85/174 (48%), Gaps = 39/174 (22%)
Query: 19 FQAKVVDHNNRIV-PFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + P G GEL RG+ MLGYWE +KT E I RW+ TG
Sbjct: 360 LEVKVVDPATGVTQPRGRAGELCTRGYSVMLGYWEQPEKTAEAIDAGRWMHTG------- 412
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY ++VGRIKDMIIRGGENIYP
Sbjct: 413 ------------------------------DLAVMREDGYVEIVGRIKDMIIRGGENIYP 442
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEV-GISIKLKENAKLNAYEDKSISSD 190
+EIEEF+ HP + + GVP E+ GEEV I L L E ++ +D
Sbjct: 443 REIEEFLYAHPKIRDVQVVGVPHEKYGEEVLACVIPLDPADPLTLEELRAFCAD 496
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
AGR + D V+REDGY ++VGRIKDMIIRGGENIYP+EIEEF+ HP + + GVP
Sbjct: 405 AGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIRDVQVVGVP 464
Query: 450 DERMGEEV-GISIKLKENAKLNADDIRTFCKGKVSKF 485
E+ GEEV I L L +++R FC +++ +
Sbjct: 465 HEKYGEEVLACVIPLDPADPLTLEELRAFCADRLAHY 501
>gi|399910718|ref|ZP_10779032.1| AMP-binding domain protein [Halomonas sp. KM-1]
Length = 567
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 83/163 (50%), Gaps = 37/163 (22%)
Query: 23 VVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAM 82
V +VP G GEL RG+ MLGYW +E+ T ++I W+ TG
Sbjct: 396 VSPETGAVVPRGETGELCTRGYSVMLGYWNNEEATAKSIDSAGWMHTG------------ 443
Query: 83 AIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEE 142
D + E+GY +VGRIKDMIIRGGENIYP+EIE+
Sbjct: 444 -------------------------DLATMDEEGYIAIVGRIKDMIIRGGENIYPREIED 478
Query: 143 FIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
F+ THP + + GVPDE+ GEEV +KL E KLNA E K
Sbjct: 479 FLYTHPAISDVQVIGVPDEKYGEEVMAWVKLGEGQKLNADELK 521
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
Query: 380 EEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
EE DSAG + D + E+GY +VGRIKDMIIRGGENIYP+EIE+F+ THP
Sbjct: 427 EEATAKSIDSAGW-MHTGDLATMDEEGYIAIVGRIKDMIIRGGENIYPREIEDFLYTHPA 485
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ + GVPDE+ GEEV +KL E KLNAD+++ FCKGK++ +
Sbjct: 486 ISDVQVIGVPDEKYGEEVMAWVKLGEGQKLNADELKEFCKGKIAHY 531
>gi|331699394|ref|YP_004335633.1| long-chain-fatty-acid--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
gi|326954083|gb|AEA27780.1| Long-chain-fatty-acid--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
Length = 554
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 84/161 (52%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + VP G GEL RG+ MLGYWE KT E+I RW+ TG
Sbjct: 369 VEVKVVDPETGLTVPRGQAGELCTRGYSVMLGYWEQPDKTAESIDAARWMHTG------- 421
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ DGY + GRIKDM+IRGGEN+YP
Sbjct: 422 ------------------------------DLAVMDSDGYLNITGRIKDMVIRGGENVYP 451
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP+VL+A GVPD + GEE+ +KL++ +
Sbjct: 452 REIEEFLYTHPDVLDAQVIGVPDIKYGEELCAWVKLRDGVE 492
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ DGY + GRIKDM+IRGGEN+YP+EIEEF+ THP+VL+A GVP
Sbjct: 414 AARWMHTGDLAVMDSDGYLNITGRIKDMVIRGGENVYPREIEEFLYTHPDVLDAQVIGVP 473
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
D + GEE+ +KL++ + L A+ +R F GK++ +
Sbjct: 474 DIKYGEELCAWVKLRDGVEGLTAEQVREFATGKLAHY 510
>gi|358448423|ref|ZP_09158927.1| AMP-binding domain protein [Marinobacter manganoxydans MnI7-9]
gi|357227520|gb|EHJ05981.1| AMP-binding domain protein [Marinobacter manganoxydans MnI7-9]
Length = 562
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 94/184 (51%), Gaps = 40/184 (21%)
Query: 4 MNPTDLQFSTLSSSS--FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKET 60
++P + Q +T+ + + K+VD +VP G GEL RG+ ML YW +E+KT+E
Sbjct: 367 LDPFEKQVTTVGRTQPHLETKIVDPGTGNVVPRGEIGELCTRGYSVMLKYWNNEEKTREA 426
Query: 61 IGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQV 120
I W+ TG D + E+GY Q+
Sbjct: 427 IDSAGWMHTG-------------------------------------DLATMDEEGYVQI 449
Query: 121 VGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
VGRIKDM+IRGGENIYPKEIEEF+ THP + E G+PD++ GEE+ +KL +A
Sbjct: 450 VGRIKDMVIRGGENIYPKEIEEFLYTHPAIEEVQVTGIPDDKYGEELIAWVKLAPDAAPV 509
Query: 181 AYED 184
ED
Sbjct: 510 TAED 513
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 74/107 (69%), Gaps = 2/107 (1%)
Query: 380 EEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
EE+ DSAG + D + E+GY Q+VGRIKDM+IRGGENIYPKEIEEF+ THP
Sbjct: 420 EEKTREAIDSAGW-MHTGDLATMDEEGYVQIVGRIKDMVIRGGENIYPKEIEEFLYTHPA 478
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
+ E G+PD++ GEE+ +KL +A + A+D++ FCKGK++ F
Sbjct: 479 IEEVQVTGIPDDKYGEELIAWVKLAPDAAPVTAEDLQAFCKGKIAHF 525
>gi|386334612|ref|YP_006030783.1| long-chain-fatty-acid--CoA ligase [Ralstonia solanacearum Po82]
gi|421899919|ref|ZP_16330282.1| fatty-acid--coa ligase protein [Ralstonia solanacearum MolK2]
gi|206591125|emb|CAQ56737.1| fatty-acid--coa ligase protein [Ralstonia solanacearum MolK2]
gi|334197062|gb|AEG70247.1| Long-chain-fatty-acid--CoA ligase [Ralstonia solanacearum Po82]
Length = 573
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 90/186 (48%), Gaps = 40/186 (21%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ Q K+VD +VP G GEL +G+ MLGYW+DE KT E++
Sbjct: 378 DPLDKRVTTVGRIQPHLQVKLVDGAGEVVPVGEKGELCTKGYSVMLGYWDDEAKTAESV- 436
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+RTG D DGY +VG
Sbjct: 437 VDGWMRTG-------------------------------------DLATFDADGYCNIVG 459
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK +
Sbjct: 460 RVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLKPGQQATEE 519
Query: 183 EDKSIS 188
E ++
Sbjct: 520 EIRAFC 525
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 57/81 (70%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY +VGR+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK
Sbjct: 452 DGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLK 511
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+ ++IR FC+G+++ +
Sbjct: 512 PGQQATEEEIRAFCQGQIAHY 532
>gi|194390324|dbj|BAG61931.1| unnamed protein product [Homo sapiens]
Length = 572
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 78/156 (50%), Gaps = 37/156 (23%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
TPGEL IRG+C MLGYW + QKT+E + D+W TG
Sbjct: 412 LNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTG---------------------- 449
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
D + E G ++VGR KDMIIRGGENIYP E+E+F THP V E
Sbjct: 450 ---------------DVATMNEQGLCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQE 494
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
GV D+RMGEE+ I+LK+ + E K+
Sbjct: 495 VQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 530
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 450 DVATMNEQGLCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 509
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 510 CACIRLKDGEETTVEEIKAFCKGKISHF 537
>gi|410643146|ref|ZP_11353648.1| fatty-acyl-CoA synthase [Glaciecola chathamensis S18K6]
gi|410137324|dbj|GAC11835.1| fatty-acyl-CoA synthase [Glaciecola chathamensis S18K6]
Length = 564
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 82/165 (49%), Gaps = 37/165 (22%)
Query: 17 SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTS 76
S + K+VD +NR++P G GE+ RG+ M GYW D +T ETI WL +G
Sbjct: 381 SRIEVKLVDEHNRVIPIGERGEVCTRGYSVMRGYWNDPSRTAETIDSGGWLHSG------ 434
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
D ++ EDGY +VGR KDMIIRGGENIY
Sbjct: 435 -------------------------------DIGIMDEDGYVTIVGRSKDMIIRGGENIY 463
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
PKEIEEF+ THP V + +G+P GEEV I LK + A
Sbjct: 464 PKEIEEFLYTHPAVQDIQVFGIPHVDFGEEVCAWICLKPGSSAAA 508
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 61/96 (63%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
+G + D ++ EDGY +VGR KDMIIRGGENIYPKEIEEF+ THP V + +G+P
Sbjct: 427 SGGWLHSGDIGIMDEDGYVTIVGRSKDMIIRGGENIYPKEIEEFLYTHPAVQDIQVFGIP 486
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
GEEV I LK + A DI FCK +++ F
Sbjct: 487 HVDFGEEVCAWICLKPGSSAAAKDITDFCKNQIAHF 522
>gi|385330740|ref|YP_005884691.1| acyl-CoA synthase [Marinobacter adhaerens HP15]
gi|311693890|gb|ADP96763.1| acyl-CoA synthase [Marinobacter adhaerens HP15]
Length = 548
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 94/184 (51%), Gaps = 40/184 (21%)
Query: 4 MNPTDLQFSTLSSSS--FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKET 60
++P + Q +T+ + + K+VD +VP G GEL RG+ ML YW +E+KT+E
Sbjct: 353 LDPFEKQVTTVGRTQPHLETKIVDPGTGNVVPRGEIGELCTRGYSVMLKYWNNEEKTREA 412
Query: 61 IGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQV 120
I W+ TG D + E+GY Q+
Sbjct: 413 IDSAGWMHTG-------------------------------------DLATMDEEGYVQI 435
Query: 121 VGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
VGRIKDM+IRGGENIYPKEIEEF+ THP + E G+PD++ GEE+ +KL +A
Sbjct: 436 VGRIKDMVIRGGENIYPKEIEEFLYTHPAIEEVQVTGIPDDKYGEELIAWVKLAPDAAPV 495
Query: 181 AYED 184
ED
Sbjct: 496 TAED 499
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 74/107 (69%), Gaps = 2/107 (1%)
Query: 380 EEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
EE+ DSAG + D + E+GY Q+VGRIKDM+IRGGENIYPKEIEEF+ THP
Sbjct: 406 EEKTREAIDSAGW-MHTGDLATMDEEGYVQIVGRIKDMVIRGGENIYPKEIEEFLYTHPA 464
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
+ E G+PD++ GEE+ +KL +A + A+D++ FCKGK++ F
Sbjct: 465 IEEVQVTGIPDDKYGEELIAWVKLAPDAAPVTAEDLQAFCKGKIAHF 511
>gi|56697375|ref|YP_167743.1| AMP-binding protein [Ruegeria pomeroyi DSS-3]
gi|56679112|gb|AAV95778.1| AMP-binding enzyme [Ruegeria pomeroyi DSS-3]
Length = 571
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 85/168 (50%), Gaps = 38/168 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD VP G GEL RG+ M GYW+D ++T E I D W+ TG
Sbjct: 393 LEVKIVDDTGNTVPVGVQGELCTRGYSVMQGYWDDPERTAEAI-RDGWMHTG-------- 443
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D VL DG+ + GR+KDMIIRGGENIYP+
Sbjct: 444 -----------------------------DLAVLDADGFCTITGRVKDMIIRGGENIYPR 474
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
EIEEF+ HP++ E +G+PD RMGEEV + K +++A + ++
Sbjct: 475 EIEEFLFGHPDIKEVQVFGIPDARMGEEVCAWVVAKPGCEISAEDVRT 522
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 65/88 (73%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D VL DG+ + GR+KDMIIRGGENIYP+EIEEF+ HP++ E +G+PD RMGEEV
Sbjct: 444 DLAVLDADGFCTITGRVKDMIIRGGENIYPREIEEFLFGHPDIKEVQVFGIPDARMGEEV 503
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ K +++A+D+RT+C+G+++ F
Sbjct: 504 CAWVVAKPGCEISAEDVRTYCRGQIAHF 531
>gi|254460745|ref|ZP_05074161.1| acyl-CoA synthase [Rhodobacterales bacterium HTCC2083]
gi|206677334|gb|EDZ41821.1| acyl-CoA synthase [Rhodobacteraceae bacterium HTCC2083]
Length = 587
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 78/149 (52%), Gaps = 38/149 (25%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD +IVP G GEL RG+ M GYWED +T + I D W+ TG
Sbjct: 410 LEVKIVDEAGQIVPVGVQGELCTRGYSVMKGYWEDTARTSDAI-RDGWMHTG-------- 460
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D VL E G+ + GR+KDMIIRGGENIYP+
Sbjct: 461 -----------------------------DLAVLDEGGFCSITGRVKDMIIRGGENIYPR 491
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
EIEEF+ +HP+V E +GVPD R+GEEV
Sbjct: 492 EIEEFLFSHPDVSEVQVFGVPDTRLGEEV 520
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D VL E G+ + GR+KDMIIRGGENIYP+EIEEF+ +HP+V E +GVPD R+GEEV
Sbjct: 461 DLAVLDEGGFCSITGRVKDMIIRGGENIYPREIEEFLFSHPDVSEVQVFGVPDTRLGEEV 520
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ K + + + +R FC G+++ F
Sbjct: 521 CAWVVAKTSGGVTREALRVFCDGQIAHF 548
>gi|444914404|ref|ZP_21234547.1| Acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Cystobacter fuscus DSM 2262]
gi|444714636|gb|ELW55515.1| Acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Cystobacter fuscus DSM 2262]
Length = 546
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 93/182 (51%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P D + +T+ + KVV+ +VP G+PGEL RG+ MLGYW + + T++ I
Sbjct: 346 DPLDKRVTTVGRVHPHVEVKVVEPATGAVVPRGSPGELCTRGYSVMLGYWNNPEATRQAI 405
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
W+ TG D L E+GY ++V
Sbjct: 406 DEAGWMHTG-------------------------------------DLATLDEEGYVKIV 428
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIKD+IIRGGEN+YP+E+EEF+ THP + EA GVP E+ GEEV +KLK A +
Sbjct: 429 GRIKDLIIRGGENVYPREVEEFLHTHPVISEAQVIGVPSEKYGEEVMAWVKLKPGATVTH 488
Query: 182 YE 183
E
Sbjct: 489 EE 490
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+GY ++VGRIKD+IIRGGEN+YP+E+EEF+ THP + EA GVP E+ GEEV
Sbjct: 415 DLATLDEEGYVKIVGRIKDLIIRGGENVYPREVEEFLHTHPVISEAQVIGVPSEKYGEEV 474
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+KLK A + +++ +C G++S F
Sbjct: 475 MAWVKLKPGATVTHEELTRYCTGRISTF 502
>gi|254250970|ref|ZP_04944288.1| Acetyl-coenzyme A synthetase 1 [Burkholderia dolosa AUO158]
gi|124893579|gb|EAY67459.1| Acetyl-coenzyme A synthetase 1 [Burkholderia dolosa AUO158]
Length = 575
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 84/162 (51%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K++D + IVP G GEL +G+ MLGYW+D+ KT+E + D W+ TG
Sbjct: 396 LEVKIIDPSGDIVPVGATGELCTKGYSVMLGYWDDDAKTREVL-IDGWMHTG-------- 446
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L DGY +VGR+KDM+IRGGEN+YP+
Sbjct: 447 -----------------------------DLATLDADGYCNIVGRLKDMVIRGGENVYPR 477
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + A +GVPD + GEE+ I L+ N ++
Sbjct: 478 EIEEFLFRHPKIQSAQVFGVPDPKYGEELCAWIVLRANEQMT 519
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L DGY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + A +GVPD + GEE+
Sbjct: 447 DLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDPKYGEEL 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ N ++ DD+R FC+G+++ +
Sbjct: 507 CAWIVLRANEQMTEDDVRAFCQGQIAHY 534
>gi|262378975|ref|ZP_06072132.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter radioresistens
SH164]
gi|262300260|gb|EEY88172.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter radioresistens
SH164]
Length = 561
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 37/154 (24%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D N +IVP G G+L RG+ MLGYWEDE+KTKE I W+ TG
Sbjct: 385 EIKIIDRNGKIVPRGKLGQLCTRGYSVMLGYWEDEEKTKEVIDQTGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + ++G+ Q+ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DLAEMDQEGFIQIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
IE+F+ THP+V + GVPD++ GEE+ I L
Sbjct: 468 IEDFLYTHPDVSDVQVVGVPDQKYGEELCACIIL 501
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 59/82 (71%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ ++G+ Q+ GRIKD++IRGGEN++PKEIE+F+ THP+V + GVPD++ GEE+ I
Sbjct: 440 MDQEGFIQIKGRIKDVVIRGGENLFPKEIEDFLYTHPDVSDVQVVGVPDQKYGEELCACI 499
Query: 462 KLKENAKLNADDIRTFCKGKVS 483
L ++ + + IR +CK +S
Sbjct: 500 ILHPHSNTSEEIIRQYCKEHIS 521
>gi|83746599|ref|ZP_00943649.1| Long-chain-fatty-acid--CoA ligase [Ralstonia solanacearum UW551]
gi|207742291|ref|YP_002258683.1| fatty-acid--coa ligase protein [Ralstonia solanacearum IPO1609]
gi|83726733|gb|EAP73861.1| Long-chain-fatty-acid--CoA ligase [Ralstonia solanacearum UW551]
gi|206593679|emb|CAQ60606.1| fatty-acid--coa ligase protein [Ralstonia solanacearum IPO1609]
Length = 573
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 90/186 (48%), Gaps = 40/186 (21%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ Q K+VD +VP G GEL +G+ MLGYW+DE KT E++
Sbjct: 378 DPLDKRVTTVGRIQPHLQVKLVDGAGEVVPVGEKGELCTKGYSVMLGYWDDEAKTAESV- 436
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+RTG D DGY +VG
Sbjct: 437 VDGWMRTG-------------------------------------DLATFDADGYCNIVG 459
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK +
Sbjct: 460 RVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLKPGQQATEE 519
Query: 183 EDKSIS 188
E ++
Sbjct: 520 EIRAFC 525
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 57/81 (70%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY +VGR+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK
Sbjct: 452 DGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLK 511
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+ ++IR FC+G+++ +
Sbjct: 512 PGQQATEEEIRAFCQGQIAHY 532
>gi|365866103|ref|ZP_09405729.1| AMP-binding domain protein [Streptomyces sp. W007]
gi|364004493|gb|EHM25607.1| AMP-binding domain protein [Streptomyces sp. W007]
Length = 535
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 79/150 (52%), Gaps = 38/150 (25%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + +P G+ GEL RG+ MLGYW+ +T E + RW+RTG
Sbjct: 363 IEIKVVDPVTGVTLPRGSVGELRTRGYGVMLGYWDQPDRTAEAVDAGRWMRTG------- 415
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY QV GRIKDMIIRGGEN+YP
Sbjct: 416 ------------------------------DLAVMREDGYVQVAGRIKDMIIRGGENVYP 445
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
+EIEEF+ HP V + GVPDER GEE+
Sbjct: 446 REIEEFLYGHPKVADVQVVGVPDERYGEEI 475
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
AGR + D V+REDGY QV GRIKDMIIRGGEN+YP+EIEEF+ HP V + GVP
Sbjct: 408 AGRWMRTGDLAVMREDGYVQVAGRIKDMIIRGGENVYPREIEEFLYGHPKVADVQVVGVP 467
Query: 450 DERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
DER GEE+ + ++ A ++I +C+ +++ +
Sbjct: 468 DERYGEEILACVIPRDPADPPTLEEIAAYCRERLAHY 504
>gi|332308495|ref|YP_004436346.1| AMP-dependent synthetase and ligase [Glaciecola sp. 4H-3-7+YE-5]
gi|332175824|gb|AEE25078.1| AMP-dependent synthetase and ligase [Glaciecola sp. 4H-3-7+YE-5]
Length = 564
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 82/165 (49%), Gaps = 37/165 (22%)
Query: 17 SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTS 76
S + K+VD +NR++P G GE+ RG+ M GYW D +T ETI WL +G
Sbjct: 381 SRIEVKLVDEHNRVLPIGERGEVCTRGYSVMRGYWNDPSRTTETIDSGGWLHSG------ 434
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
D ++ EDGY +VGR KDMIIRGGENIY
Sbjct: 435 -------------------------------DIGIMDEDGYVTIVGRSKDMIIRGGENIY 463
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
PKEIEEF+ THP V + +G+P GEEV I LK + A
Sbjct: 464 PKEIEEFLYTHPAVQDIQVFGIPHADFGEEVCAWICLKPGSSAAA 508
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 61/96 (63%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
+G + D ++ EDGY +VGR KDMIIRGGENIYPKEIEEF+ THP V + +G+P
Sbjct: 427 SGGWLHSGDIGIMDEDGYVTIVGRSKDMIIRGGENIYPKEIEEFLYTHPAVQDIQVFGIP 486
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
GEEV I LK + A DI FCK +++ F
Sbjct: 487 HADFGEEVCAWICLKPGSSAAAKDITDFCKNQIAHF 522
>gi|441517795|ref|ZP_20999527.1| putative fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 = NBRC
16056]
gi|441455336|dbj|GAC57488.1| putative fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 = NBRC
16056]
Length = 550
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 90/176 (51%), Gaps = 40/176 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + K+ D VP G GE RG+ MLGY D KT E +
Sbjct: 348 DPLELRVGTVGRVGPHLEIKIADPATGETVPRGQAGEFCTRGYSVMLGYRNDPAKTAEVL 407
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
G D W+RTG D V+ +GY ++
Sbjct: 408 GDDGWMRTG-------------------------------------DLAVMEANGYVRIT 430
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
GRIKDM+IRGGENIYP+EIEEF+ THP++++A GVPDE+ GEE+ ++L+E A
Sbjct: 431 GRIKDMVIRGGENIYPREIEEFLYTHPDIVDAQVIGVPDEKYGEELMAWVQLREGA 486
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 27/192 (14%)
Query: 294 PVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITPALKGLYHFKKWMNPKFSTT 353
PV+ + + DPLE+ + V + K+ + G +F T
Sbjct: 339 PVSTQTRMDDPLELRVGTVGRVGPHLEIKIADPATGETVPRGQAG----------EFCTR 388
Query: 354 TRKVALTWPNSMDSEARIYHYKKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGR 413
V L + N A + ++R D V+ +GY ++ GR
Sbjct: 389 GYSVMLGYRNDPAKTAEVLGDDGWMRT----------------GDLAVMEANGYVRITGR 432
Query: 414 IKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNAD 472
IKDM+IRGGENIYP+EIEEF+ THP++++A GVPDE+ GEE+ ++L+E A ++ A
Sbjct: 433 IKDMVIRGGENIYPREIEEFLYTHPDIVDAQVIGVPDEKYGEELMAWVQLREGAPEMTAQ 492
Query: 473 DIRTFCKGKVSK 484
+R F +G +S+
Sbjct: 493 TLREFAEGAISR 504
>gi|421466015|ref|ZP_15914701.1| AMP-binding enzyme [Acinetobacter radioresistens WC-A-157]
gi|400203526|gb|EJO34512.1| AMP-binding enzyme [Acinetobacter radioresistens WC-A-157]
Length = 561
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 84/154 (54%), Gaps = 37/154 (24%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D N +IVP G G+L RG+ MLGYWEDE+KTKE I W+ TG
Sbjct: 385 EIKIIDRNGKIVPRGKLGQLCTRGYSVMLGYWEDEEKTKEVIDQTGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
L + QQ G+ Q+ GRIKD++IRGGEN++PKE
Sbjct: 436 -------DLAEMDQQ---------------------GFIQIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
IE+F+ THP+V + GVPD++ GEE+ I L
Sbjct: 468 IEDFLYTHPDVSDVQVVGVPDQKYGEELCACIIL 501
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 58/82 (70%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ + G+ Q+ GRIKD++IRGGEN++PKEIE+F+ THP+V + GVPD++ GEE+ I
Sbjct: 440 MDQQGFIQIKGRIKDVVIRGGENLFPKEIEDFLYTHPDVSDVQVVGVPDQKYGEELCACI 499
Query: 462 KLKENAKLNADDIRTFCKGKVS 483
L ++ + + IR +CK +S
Sbjct: 500 ILHPHSNTSEEIIRQYCKEHIS 521
>gi|255318758|ref|ZP_05359984.1| acyl-CoA synthetase family member 2 [Acinetobacter radioresistens
SK82]
gi|421855790|ref|ZP_16288165.1| putative long-chain-fatty-acid--CoA ligase [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
gi|255304014|gb|EET83205.1| acyl-CoA synthetase family member 2 [Acinetobacter radioresistens
SK82]
gi|403188799|dbj|GAB74366.1| putative long-chain-fatty-acid--CoA ligase [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
Length = 561
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 84/154 (54%), Gaps = 37/154 (24%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D N +IVP G G+L RG+ MLGYWEDE+KTKE I W+ TG
Sbjct: 385 EIKIIDRNGKIVPRGKLGQLCTRGYSVMLGYWEDEEKTKEVIDQTGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
L + QQ G+ Q+ GRIKD++IRGGEN++PKE
Sbjct: 436 -------DLAEMDQQ---------------------GFIQIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
IE+F+ THP+V + GVPD++ GEE+ I L
Sbjct: 468 IEDFLYTHPDVSDVQVVGVPDQKYGEELCACIIL 501
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 58/82 (70%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ + G+ Q+ GRIKD++IRGGEN++PKEIE+F+ THP+V + GVPD++ GEE+ I
Sbjct: 440 MDQQGFIQIKGRIKDVVIRGGENLFPKEIEDFLYTHPDVSDVQVVGVPDQKYGEELCACI 499
Query: 462 KLKENAKLNADDIRTFCKGKVS 483
L ++ + + IR +CK +S
Sbjct: 500 ILHPHSNTSEEIIRQYCKEHIS 521
>gi|386843340|ref|YP_006248398.1| acyl-CoA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374103641|gb|AEY92525.1| acyl-CoA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451796631|gb|AGF66680.1| acyl-CoA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 530
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 77/150 (51%), Gaps = 38/150 (25%)
Query: 19 FQAKVVDHNNRIV-PFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + P G GEL RG+ MLGYW + +KT E I RW+ TG
Sbjct: 358 LEVKVVDPATGVTQPRGAAGELCTRGYSVMLGYWNEPEKTAEAIDAGRWMHTG------- 410
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY ++VGRIKDMIIRGGENIYP
Sbjct: 411 ------------------------------DLAVMREDGYVEIVGRIKDMIIRGGENIYP 440
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
+EIEEF+ HP + + GVP ER GEEV
Sbjct: 441 REIEEFLYAHPKIRDVQVVGVPHERYGEEV 470
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E AGR + D V+REDGY ++VGRIKDMIIRGGENIYP+EIEEF+
Sbjct: 390 YWNEPEKTAEAIDAGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYA 449
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
HP + + GVP ER GEEV + + A L +++R FC G+++ +
Sbjct: 450 HPKIRDVQVVGVPHERYGEEVLACVIPSDPADPLTLEELRDFCAGRLAHY 499
>gi|148683592|gb|EDL15539.1| mCG63314 [Mus musculus]
Length = 615
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 84/170 (49%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ + PGEL IRG+C M GYW + QKT ET+G D+W RTG
Sbjct: 441 KAQIVNVETGELTNLNVPGELYIRGYCVMQGYWGEPQKTFETVGQDKWYRTG-------- 492
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E G+ ++VGR KDMIIRGGENIYP
Sbjct: 493 -----------------------------DIASMDEQGFCKIVGRSKDMIIRGGENIYPA 523
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F HP V EA GV D+RMGEE+ I LK A E K+
Sbjct: 524 ELEDFFLKHPQVQEAQVVGVKDKRMGEEICACIPLKSGETTTAEEIKAFC 573
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
E G+ ++VGR KDMIIRGGENIYP E+E+F HP V EA GV D+RMGEE+ I L
Sbjct: 499 EQGFCKIVGRSKDMIIRGGENIYPAELEDFFLKHPQVQEAQVVGVKDKRMGEEICACIPL 558
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
K A++I+ FCKGK+S F
Sbjct: 559 KSGETTTAEEIKAFCKGKISHF 580
>gi|429215399|ref|ZP_19206561.1| AMP-binding protein [Pseudomonas sp. M1]
gi|428154626|gb|EKX01177.1| AMP-binding protein [Pseudomonas sp. M1]
Length = 556
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 80/149 (53%), Gaps = 37/149 (24%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++K++D + RIVP GT GEL RG+ MLGYW + Q T E I P RW+ TG
Sbjct: 382 LESKIIDGDGRIVPRGTIGELCTRGYSVMLGYWNNPQATAEAISPARWMLTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E G ++VGR KDMIIRGGENIYP+
Sbjct: 434 -----------------------------DLAVMDEAGNVRIVGRSKDMIIRGGENIYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
EIEEF+ TH V +A G+PD++ GEE+
Sbjct: 465 EIEEFLYTHHAVADAQVIGIPDDKYGEEL 493
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 63/97 (64%)
Query: 389 SAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGV 448
S R + D V+ E G ++VGR KDMIIRGGENIYP+EIEEF+ TH V +A G+
Sbjct: 425 SPARWMLTGDLAVMDEAGNVRIVGRSKDMIIRGGENIYPREIEEFLYTHHAVADAQVIGI 484
Query: 449 PDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
PD++ GEE+ +K ++ +++R FCK +++ F
Sbjct: 485 PDDKYGEELVAWVKFHPGHGVDEEELRAFCKARIAHF 521
>gi|416913667|ref|ZP_11931852.1| AMP-binding domain protein, partial [Burkholderia sp. TJI49]
gi|325527928|gb|EGD05170.1| AMP-binding domain protein [Burkholderia sp. TJI49]
Length = 180
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 84/162 (51%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD IVP G GEL +G+ MLGYW+DE KT+ETI D W+ TG
Sbjct: 1 LEVKIVDPEGNIVPVGATGELCTKGYSVMLGYWDDEAKTRETI-VDGWMHTG-------- 51
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L DGY +VGR+KDM+IRGGENIYP+
Sbjct: 52 -----------------------------DLATLDADGYCNIVGRLKDMVIRGGENIYPR 82
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + +GVPD + GEE+ I L+ + +++
Sbjct: 83 EIEEFLFRHPKIQSVQVFGVPDPKYGEELCAWIVLRADEQMS 124
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L DGY +VGR+KDM+IRGGENIYP+EIEEF+ HP + +GVPD + GEE+
Sbjct: 52 DLATLDADGYCNIVGRLKDMVIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDPKYGEEL 111
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + +++ DD+R FC G+++ +
Sbjct: 112 CAWIVLRADEQMSEDDVRAFCHGQIAHY 139
>gi|108801400|ref|YP_641597.1| AMP-binding domain-containing protein [Mycobacterium sp. MCS]
gi|119870553|ref|YP_940505.1| AMP-binding domain-containing protein [Mycobacterium sp. KMS]
gi|108771819|gb|ABG10541.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119696642|gb|ABL93715.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
Length = 540
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 83/157 (52%), Gaps = 38/157 (24%)
Query: 19 FQAKVVDHN-NRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + V G PGE RG+ MLGYW D KT + I D W+ TG
Sbjct: 361 VEVKIVDPDTGETVERGEPGEFCTRGYSVMLGYWNDPDKTAQAIDADGWMHTG------- 413
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R+DGY VVGRIKDM+IRGGENIYP
Sbjct: 414 ------------------------------DLAVMRDDGYCNVVGRIKDMVIRGGENIYP 443
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
+E+EEF+ THP++ +A GVPD++ GEE+ I+++
Sbjct: 444 REVEEFLHTHPDIDDAQVIGVPDDKYGEEICAWIRMR 480
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+R+DGY VVGRIKDM+IRGGENIYP+E+EEF+ THP++ +A GVPD++ GEE+
Sbjct: 414 DLAVMRDDGYCNVVGRIKDMVIRGGENIYPREVEEFLHTHPDIDDAQVIGVPDDKYGEEI 473
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSKF 485
I+++ L A+ +R F + K++ +
Sbjct: 474 CAWIRMRPGRPPLTAEAVREFARDKLAHY 502
>gi|392957198|ref|ZP_10322722.1| AMP-binding domain protein [Bacillus macauensis ZFHKF-1]
gi|391876605|gb|EIT85201.1| AMP-binding domain protein [Bacillus macauensis ZFHKF-1]
Length = 539
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 87/136 (63%), Gaps = 5/136 (3%)
Query: 352 TTTRKVALTWPNSMDSEARIYHYKK--YLREEENITVPDSAGRSIFEKDQFVLREDGYGQ 409
T +VA+ P + + R YH K Y + + D G + D V+ EDGY
Sbjct: 366 VTNEEVAIGQPGELCT--RGYHVMKGYYKMPDATMAAIDQEGW-LHTGDLAVMDEDGYVT 422
Query: 410 VVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKL 469
+ GR+KDMIIRGGENIYP+E+EEF+ +HP +L+ GVPDE+ GE+V SI+LKE ++
Sbjct: 423 ITGRLKDMIIRGGENIYPREVEEFLYSHPAILDVQVIGVPDEKYGEKVAASIRLKEGKQV 482
Query: 470 NADDIRTFCKGKVSKF 485
+A++I T+C G+++KF
Sbjct: 483 SAEEIITYCTGQIAKF 498
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 85/165 (51%), Gaps = 38/165 (23%)
Query: 20 QAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ KVVD N V G PGEL RG+ M GY++ T I + WL TG
Sbjct: 359 EIKVVDPVTNEEVAIGQPGELCTRGYHVMKGYYKMPDATMAAIDQEGWLHTG-------- 410
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ EDGY + GR+KDMIIRGGENIYP+
Sbjct: 411 -----------------------------DLAVMDEDGYVTITGRLKDMIIRGGENIYPR 441
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
E+EEF+ +HP +L+ GVPDE+ GE+V SI+LKE +++A E
Sbjct: 442 EVEEFLYSHPAILDVQVIGVPDEKYGEKVAASIRLKEGKQVSAEE 486
>gi|383453606|ref|YP_005367595.1| AMP-binding protein [Corallococcus coralloides DSM 2259]
gi|380735082|gb|AFE11084.1| AMP-binding domain protein [Corallococcus coralloides DSM 2259]
Length = 547
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 83/163 (50%), Gaps = 38/163 (23%)
Query: 19 FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD ++ +VP G PGEL RG+ MLGYWE+ + T I W+ TG
Sbjct: 363 LEVKVVDPDSGAVVPLGQPGELCTRGYSVMLGYWENAEATAAAIDRAGWMHTG------- 415
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + +GY ++VGRIKDMIIRGGEN+YP
Sbjct: 416 ------------------------------DLATMDGEGYVKIVGRIKDMIIRGGENVYP 445
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
+E+EEF+ THP + EA GVP + GEEV ++LK A L
Sbjct: 446 REVEEFLHTHPEISEAQVIGVPSVKYGEEVMAWVRLKSGASLT 488
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY ++VGRIKDMIIRGGEN+YP+E+EEF+ THP + EA GVP + GEEV
Sbjct: 416 DLATMDGEGYVKIVGRIKDMIIRGGENVYPREVEEFLHTHPEISEAQVIGVPSVKYGEEV 475
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++LK A L + + FC G++S F
Sbjct: 476 MAWVRLKSGASLTPETLTAFCTGRISTF 503
>gi|419708416|ref|ZP_14235886.1| AMP-binding domain protein [Mycobacterium abscessus M93]
gi|382944448|gb|EIC68756.1| AMP-binding domain protein [Mycobacterium abscessus M93]
Length = 546
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 93/173 (53%), Gaps = 39/173 (22%)
Query: 19 FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD N+ V G GEL RG+ MLGYW DE T+E + D W+ TG
Sbjct: 361 IEIKIVDPNSGETVQRGQSGELCTRGYSVMLGYWNDEAHTREVLDTDGWMHTG------- 413
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R+DGY ++GR+KDM+IRGGENIYP
Sbjct: 414 ------------------------------DLAVMRDDGYCTIIGRLKDMVIRGGENIYP 443
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK-ENAKLNAYEDKSISS 189
+EIEEF+ THP++ + + GVPDE+ GEE+ ++++ + ++A ++ +S
Sbjct: 444 REIEEFLLTHPDIEDVHVVGVPDEKYGEELCAWVRMRPDRVVIDAVAIRAFAS 496
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+R+DGY ++GR+KDM+IRGGENIYP+EIEEF+ THP++ + + GVPDE+ GEE+
Sbjct: 414 DLAVMRDDGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVGVPDEKYGEEL 473
Query: 458 GISIKLK-ENAKLNADDIRTFCKGKVSKF 485
++++ + ++A IR F G+++ +
Sbjct: 474 CAWVRMRPDRVVIDAVAIRAFASGRLAHY 502
>gi|419716125|ref|ZP_14243523.1| AMP-binding domain protein [Mycobacterium abscessus M94]
gi|382941331|gb|EIC65650.1| AMP-binding domain protein [Mycobacterium abscessus M94]
Length = 546
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 93/173 (53%), Gaps = 39/173 (22%)
Query: 19 FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD N+ V G GEL RG+ MLGYW DE T+E + D W+ TG
Sbjct: 361 IEIKIVDPNSGETVQRGQSGELCTRGYSVMLGYWNDEAHTREVLDTDGWMHTG------- 413
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R+DGY ++GR+KDM+IRGGENIYP
Sbjct: 414 ------------------------------DLAVMRDDGYCTIIGRLKDMVIRGGENIYP 443
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK-ENAKLNAYEDKSISS 189
+EIEEF+ THP++ + + GVPDE+ GEE+ ++++ + ++A ++ +S
Sbjct: 444 REIEEFLLTHPDIEDVHVVGVPDEKYGEELCAWVRMRPDRVVIDAVAIRAFAS 496
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+R+DGY ++GR+KDM+IRGGENIYP+EIEEF+ THP++ + + GVPDE+ GEE+
Sbjct: 414 DLAVMRDDGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVGVPDEKYGEEL 473
Query: 458 GISIKLK-ENAKLNADDIRTFCKGKVSKF 485
++++ + ++A IR F G+++ +
Sbjct: 474 CAWVRMRPDRVVIDAVAIRAFASGRLAHY 502
>gi|126437383|ref|YP_001073074.1| AMP-binding domain-containing protein [Mycobacterium sp. JLS]
gi|126237183|gb|ABO00584.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
Length = 540
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 83/157 (52%), Gaps = 38/157 (24%)
Query: 19 FQAKVVDHN-NRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + V G PGE RG+ MLGYW D KT + I D W+ TG
Sbjct: 361 VEVKIVDPDTGETVERGEPGEFCTRGYSVMLGYWNDPDKTAQAIDADGWMHTG------- 413
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R+DGY VVGRIKDM+IRGGENIYP
Sbjct: 414 ------------------------------DLAVMRDDGYCNVVGRIKDMVIRGGENIYP 443
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
+E+EEF+ THP++ +A GVPD++ GEE+ I+++
Sbjct: 444 REVEEFLHTHPDIDDAQVIGVPDDKYGEEICAWIRMR 480
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+R+DGY VVGRIKDM+IRGGENIYP+E+EEF+ THP++ +A GVPD++ GEE+
Sbjct: 414 DLAVMRDDGYCNVVGRIKDMVIRGGENIYPREVEEFLHTHPDIDDAQVIGVPDDKYGEEI 473
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSKF 485
I+++ L A+ +R F + K++ +
Sbjct: 474 CAWIRMRPGRPPLTAEAVREFARDKLAHY 502
>gi|344173641|emb|CCA88810.1| long-chain-fatty-acid-CoA ligase [Ralstonia syzygii R24]
Length = 571
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 90/188 (47%), Gaps = 40/188 (21%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + K+VD +VP G GEL +G+ MLGYW+DE KT E+I
Sbjct: 376 DPLDKRVTTVGRIQPHLEVKLVDGAGEVVPVGEKGELCTKGYSVMLGYWDDEAKTAESIR 435
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+RTG D DGY +VG
Sbjct: 436 -DGWMRTG-------------------------------------DLATFDVDGYCNIVG 457
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK +
Sbjct: 458 RVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLKPGQQATEE 517
Query: 183 EDKSISSD 190
E + D
Sbjct: 518 EIREFCKD 525
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 56/81 (69%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY +VGR+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK
Sbjct: 450 DGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLK 509
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+ ++IR FCK +++ +
Sbjct: 510 PGQQATEEEIREFCKDQIAHY 530
>gi|392953725|ref|ZP_10319279.1| AMP-dependent synthetase and ligase [Hydrocarboniphaga effusa
AP103]
gi|391859240|gb|EIT69769.1| AMP-dependent synthetase and ligase [Hydrocarboniphaga effusa
AP103]
Length = 575
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 86/169 (50%), Gaps = 39/169 (23%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + ST+ + K+VD +P G GELL+RG+ MLGYW D Q+T +TI
Sbjct: 375 DPLERRVSTIGRVQPHLEVKIVDEGGNTLPRGQRGELLVRGYSVMLGYWNDAQRTADTID 434
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
+ W+RTG D ++ E+GY ++G
Sbjct: 435 AEGWMRTG-------------------------------------DLGLIDEEGYASILG 457
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 171
R KDM+IRGGEN+YP+EIEEF+ HP + + GVPD + GEE+ +
Sbjct: 458 RAKDMVIRGGENVYPREIEEFLYRHPRIRDVQVVGVPDAKFGEELCACV 506
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E+GY ++GR KDM+IRGGEN+YP+EIEEF+ HP + + GVPD + GEE+
Sbjct: 443 DLGLIDEEGYASILGRAKDMVIRGGENVYPREIEEFLYRHPRIRDVQVVGVPDAKFGEEL 502
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ + + DDIR FC+G+++ +
Sbjct: 503 CACVIAQPGEATSEDDIRAFCRGEIAHY 530
>gi|169631453|ref|YP_001705102.1| AMP-binding domain-containing protein [Mycobacterium abscessus ATCC
19977]
gi|420912039|ref|ZP_15375351.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0125-R]
gi|420918500|ref|ZP_15381803.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0125-S]
gi|420923662|ref|ZP_15386958.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0728-S]
gi|420929323|ref|ZP_15392602.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-1108]
gi|420969000|ref|ZP_15432203.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0810-R]
gi|420979661|ref|ZP_15442838.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0212]
gi|420985045|ref|ZP_15448212.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0728-R]
gi|421010205|ref|ZP_15473314.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0119-R]
gi|421015206|ref|ZP_15478281.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0122-R]
gi|421020303|ref|ZP_15483359.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0122-S]
gi|421026289|ref|ZP_15489332.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0731]
gi|421031530|ref|ZP_15494560.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0930-R]
gi|421036336|ref|ZP_15499353.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0930-S]
gi|169243420|emb|CAM64448.1| Probable fatty-acid-CoA ligase [Mycobacterium abscessus]
gi|392111391|gb|EIU37161.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0125-S]
gi|392114033|gb|EIU39802.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0125-R]
gi|392126311|gb|EIU52062.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-1108]
gi|392128315|gb|EIU54065.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0728-S]
gi|392163939|gb|EIU89628.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0212]
gi|392170041|gb|EIU95719.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0728-R]
gi|392195811|gb|EIV21430.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0119-R]
gi|392198278|gb|EIV23892.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0122-R]
gi|392206026|gb|EIV31609.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0122-S]
gi|392209812|gb|EIV35384.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0731]
gi|392219412|gb|EIV44937.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0930-R]
gi|392220188|gb|EIV45712.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0930-S]
gi|392244656|gb|EIV70134.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0810-R]
Length = 546
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 93/173 (53%), Gaps = 39/173 (22%)
Query: 19 FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD N+ V G GEL RG+ MLGYW DE T+E + D W+ TG
Sbjct: 361 IEIKIVDPNSGETVQRGQSGELCTRGYSVMLGYWNDEAHTREVLDTDGWMHTG------- 413
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R+DGY ++GR+KDM+IRGGENIYP
Sbjct: 414 ------------------------------DLAVMRDDGYCTIIGRLKDMVIRGGENIYP 443
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK-ENAKLNAYEDKSISS 189
+EIEEF+ THP++ + + GVPDE+ GEE+ ++++ + ++A ++ +S
Sbjct: 444 REIEEFLLTHPDIEDVHVVGVPDEKYGEELCAWVRMRPDRVVIDAVAIRAFAS 496
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+R+DGY ++GR+KDM+IRGGENIYP+EIEEF+ THP++ + + GVPDE+ GEE+
Sbjct: 414 DLAVMRDDGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVGVPDEKYGEEL 473
Query: 458 GISIKLK-ENAKLNADDIRTFCKGKVSKF 485
++++ + ++A IR F G+++ +
Sbjct: 474 CAWVRMRPDRVVIDAVAIRAFASGRLAHY 502
>gi|407790159|ref|ZP_11137255.1| AMP-binding domain protein [Gallaecimonas xiamenensis 3-C-1]
gi|407205174|gb|EKE75150.1| AMP-binding domain protein [Gallaecimonas xiamenensis 3-C-1]
Length = 558
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 95/186 (51%), Gaps = 39/186 (20%)
Query: 5 NPTDLQFSTLSSSSF--QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + T+ + + K+VD VP G GE+ R + MLGYW+D QK+ ET+
Sbjct: 365 DPLEKRIGTVGKAGAHQEVKIVDAFGDEVPLGERGEICNRAYSVMLGYWDDPQKSAETVD 424
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D WL +G D V+ +DGY QVVG
Sbjct: 425 QDGWLHSG-------------------------------------DLGVMDQDGYVQVVG 447
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
RIKDMIIRGGENIYP+EIEEF HP V + +G+PD++ GE+V + L+ + +A
Sbjct: 448 RIKDMIIRGGENIYPREIEEFYYRHPKVQDIQVFGIPDDKYGEQVCAWVMLRSGQQADAE 507
Query: 183 EDKSIS 188
E ++ +
Sbjct: 508 EMRAFA 513
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 64/88 (72%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +DGY QVVGRIKDMIIRGGENIYP+EIEEF HP V + +G+PD++ GE+V
Sbjct: 433 DLGVMDQDGYVQVVGRIKDMIIRGGENIYPREIEEFYYRHPKVQDIQVFGIPDDKYGEQV 492
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ L+ + +A+++R F +G++S F
Sbjct: 493 CAWVMLRSGQQADAEEMRAFAEGELSHF 520
>gi|78064767|ref|YP_367536.1| AMP-binding protein [Burkholderia sp. 383]
gi|77965512|gb|ABB06892.1| AMP-dependent synthetase and ligase [Burkholderia sp. 383]
Length = 575
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 84/162 (51%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ KVVD + IVP G GEL +G+ MLGYW+D+ KT+E + D W+ TG
Sbjct: 396 LEVKVVDPSGGIVPVGATGELCTKGYSVMLGYWDDDTKTREVL-VDGWMHTG-------- 446
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L DGY +VGR+KDM+IRGGEN+YP+
Sbjct: 447 -----------------------------DLATLDADGYCNIVGRLKDMVIRGGENVYPR 477
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + A +GVPD + GEE+ I L+ + ++
Sbjct: 478 EIEEFLFRHPKIQSAQVFGVPDTKYGEELCAWIVLRADEQMT 519
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L DGY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + A +GVPD + GEE+
Sbjct: 447 DLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDTKYGEEL 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + ++ DD+R FC G+++ +
Sbjct: 507 CAWIVLRADEQMTEDDVRAFCNGQIAHY 534
>gi|295678131|ref|YP_003606655.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1002]
gi|295437974|gb|ADG17144.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1002]
Length = 576
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 87/172 (50%), Gaps = 40/172 (23%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + K+VD IVP G GEL RG+ MLGYW+DE KT+E+I
Sbjct: 381 DPLDKRTTTVGRIQPHLEVKIVDPLGNIVPVGETGELCTRGYSVMLGYWDDEAKTRESI- 439
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D L +GY +VG
Sbjct: 440 VDGWMHTG-------------------------------------DLATLDAEGYCNIVG 462
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
R+KDM+IRGGENIYP+EIEEF+ HP + +GVPD R GEEV I L+
Sbjct: 463 RLKDMLIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDTRYGEEVCAWIVLR 514
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L +GY +VGR+KDM+IRGGENIYP+EIEEF+ HP + +GVPD R GEEV
Sbjct: 448 DLATLDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDTRYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + ++I+ FC+G+++ +
Sbjct: 508 CAWIVLRPGEQATPEEIQQFCQGQIAHY 535
>gi|429197284|ref|ZP_19189190.1| AMP-binding domain protein [Streptomyces ipomoeae 91-03]
gi|428667012|gb|EKX66129.1| AMP-binding domain protein [Streptomyces ipomoeae 91-03]
Length = 555
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 88/177 (49%), Gaps = 44/177 (24%)
Query: 19 FQAKVVDHNNRIV-PFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + P G GEL RG+ MLGYWE+ +KT E + RW+ TG
Sbjct: 384 VEVKVVDPATGVTQPRGRAGELCTRGYSVMLGYWEEPEKTAEAVDAGRWMHTG------- 436
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D +REDGY ++VGRIKDMIIRGGENIYP
Sbjct: 437 ------------------------------DLATMREDGYVEIVGRIKDMIIRGGENIYP 466
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA------KLNAYEDKSIS 188
+EIEEF+ HP + + GVP ER GEEV + ++ A +L A+ D ++
Sbjct: 467 REIEEFLYAHPKIADVQVVGVPHERYGEEVLACVIPRDAADPLTLEELRAFCDGRLA 523
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E AGR + D +REDGY ++VGRIKDMIIRGGENIYP+EIEEF+
Sbjct: 416 YWEEPEKTAEAVDAGRWMHTGDLATMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYA 475
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
HP + + GVP ER GEEV + ++ A L +++R FC G+++ +
Sbjct: 476 HPKIADVQVVGVPHERYGEEVLACVIPRDAADPLTLEELRAFCDGRLAHY 525
>gi|334145353|ref|YP_004538563.1| fatty-acyl-CoA synthase [Novosphingobium sp. PP1Y]
gi|333937237|emb|CCA90596.1| fatty-acyl-CoA synthase [Novosphingobium sp. PP1Y]
Length = 552
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+A+++ + + +P G GE RG+ MLGYWED ++T E I + W+ +G
Sbjct: 368 EARIIGLDGQTLPIGEQGEYCSRGYAVMLGYWEDPERTAEAIDAEGWMHSG--------- 418
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ DGY ++ GRIKDMIIRGGENIYP+E
Sbjct: 419 ----------------------------DLAVMDADGYVRITGRIKDMIIRGGENIYPRE 450
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEEF+ THP +L+A +GV DE+ GEEV I + +A L+
Sbjct: 451 IEEFLLTHPQILDAQVFGVDDEKFGEEVCAWIIARPDADLS 491
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ DGY ++ GRIKDMIIRGGENIYP+EIEEF+ THP +L+A +GV DE+ GEEV
Sbjct: 419 DLAVMDADGYVRITGRIKDMIIRGGENIYPREIEEFLLTHPQILDAQVFGVDDEKFGEEV 478
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I + +A L+ + C+G+++ F
Sbjct: 479 CAWIIARPDADLSTQCVLDHCRGRIAHF 506
>gi|170731479|ref|YP_001763426.1| AMP-binding domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|254246700|ref|ZP_04940021.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
PC184]
gi|124871476|gb|EAY63192.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
PC184]
gi|169814721|gb|ACA89304.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
MC0-3]
Length = 575
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 84/162 (51%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD + IVP G GEL +G+ MLGYW+D+ KT+E + D W+ TG
Sbjct: 396 LEVKIVDPSGDIVPVGATGELCTKGYSVMLGYWDDDAKTREVL-VDGWMHTG-------- 446
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L DGY +VGR+KDM+IRGGEN+YP+
Sbjct: 447 -----------------------------DLATLDADGYCNIVGRLKDMVIRGGENVYPR 477
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + A +GVPD + GEE+ I L+ + ++
Sbjct: 478 EIEEFLFRHPKIQSAQVFGVPDAKYGEELCAWIVLRADEQMT 519
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L DGY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + A +GVPD + GEE+
Sbjct: 447 DLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDAKYGEEL 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + ++ DD+R FC G+++ +
Sbjct: 507 CAWIVLRADEQMTEDDVRAFCTGQIAHY 534
>gi|357410305|ref|YP_004922041.1| AMP-dependent synthetase/ligase [Streptomyces flavogriseus ATCC
33331]
gi|320007674|gb|ADW02524.1| AMP-dependent synthetase and ligase [Streptomyces flavogriseus ATCC
33331]
Length = 535
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 38/150 (25%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KV+D + +P G GEL RG+ MLGYW+ ++T E + RW+ TG
Sbjct: 363 IEVKVIDPVTGVTLPRGEAGELCTRGYSVMLGYWDQPERTAEVVDAGRWMHTG------- 415
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY Q+VGRIKDMIIRGGEN+YP
Sbjct: 416 ------------------------------DLAVMREDGYVQIVGRIKDMIIRGGENVYP 445
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
+EIEEF+ HP +++ GVPD R GEE+
Sbjct: 446 REIEEFLHGHPKIVDVQVVGVPDARYGEEI 475
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
AGR + D V+REDGY Q+VGRIKDMIIRGGEN+YP+EIEEF+ HP +++ GVP
Sbjct: 408 AGRWMHTGDLAVMREDGYVQIVGRIKDMIIRGGENVYPREIEEFLHGHPKIVDVQVVGVP 467
Query: 450 DERMGEEV-GISIKLKENAKLNADDIRTFCKGKVSKF 485
D R GEE+ I L D++ +C+ +++ +
Sbjct: 468 DARYGEEILACVIPLDPADPPTLDELTVYCRERLAHY 504
>gi|389875794|ref|YP_006373529.1| AMP-dependent synthetase and ligase [Tistrella mobilis
KA081020-065]
gi|388530749|gb|AFK55945.1| AMP-dependent synthetase and ligase [Tistrella mobilis
KA081020-065]
Length = 557
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 88/168 (52%), Gaps = 37/168 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ ++VD ++R+VP GT GEL RG+ M GYW DE +T++ I P W+RTG
Sbjct: 381 EVRIVDGDDRVVPVGTVGELHTRGYSVMAGYWNDEARTRDAIAPGGWMRTG--------- 431
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ E G ++VGR KDMI+RGGENIYP E
Sbjct: 432 ----------------------------DLGVIDERGRCRIVGRSKDMILRGGENIYPVE 463
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSI 187
IE F+ THP +L+ +G+ D + GE+V I+ +N ++ + ++
Sbjct: 464 IENFLITHPGILDVAVFGIADAKYGEQVCAWIRRADNPDGSSLTEAAV 511
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E G ++VGR KDMI+RGGENIYP EIE F+ THP +L+ +G+ D + GE+V
Sbjct: 432 DLGVIDERGRCRIVGRSKDMILRGGENIYPVEIENFLITHPGILDVAVFGIADAKYGEQV 491
Query: 458 GISIKLKEN---AKLNADDIRTFCKGKVSKF 485
I+ +N + L + FC+G+++ F
Sbjct: 492 CAWIRRADNPDGSSLTEAAVLGFCEGRIAHF 522
>gi|262369650|ref|ZP_06062978.1| long-chain fatty-acid-CoA ligase [Acinetobacter johnsonii SH046]
gi|262315718|gb|EEY96757.1| long-chain fatty-acid-CoA ligase [Acinetobacter johnsonii SH046]
Length = 562
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 37/162 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD ++VP G GEL +RG+ MLGYWED +K++E I RW+ TG
Sbjct: 384 LEIKIVDEQGKVVPRGQLGELCVRGYSVMLGYWEDHEKSQEVIDSARWMHTG-------- 435
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E G+ ++ GRIKD++IRGGEN++PK
Sbjct: 436 -----------------------------DIAEMDEAGFVKIKGRIKDVVIRGGENLFPK 466
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIE+F+ THP+V + G+PD R GEE+ I L E+ ++
Sbjct: 467 EIEDFLYTHPDVSDVQVIGLPDARYGEELCACIILHEHHEIT 508
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Query: 381 EENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
E++ V DSA R + D + E G+ ++ GRIKD++IRGGEN++PKEIE+F+ THP+V
Sbjct: 420 EKSQEVIDSA-RWMHTGDIAEMDEAGFVKIKGRIKDVVIRGGENLFPKEIEDFLYTHPDV 478
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
+ G+PD R GEE+ I L E+ ++ + IR +C +S
Sbjct: 479 SDVQVIGLPDARYGEELCACIILHEHHEITEESIRQYCAEHIS 521
>gi|326775763|ref|ZP_08235028.1| Long-chain-fatty-acid--CoA ligase [Streptomyces griseus XylebKG-1]
gi|326656096|gb|EGE40942.1| Long-chain-fatty-acid--CoA ligase [Streptomyces griseus XylebKG-1]
Length = 535
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 83/160 (51%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + +P G+ GEL RG+ MLGYW+ +T + + RW+ TG
Sbjct: 363 IEVKVVDPVTGVTLPRGSSGELRTRGYSVMLGYWDQPDRTADVVDAGRWMHTG------- 415
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY QVVGRIKDMIIRGGEN+YP
Sbjct: 416 ------------------------------DLAVMREDGYVQVVGRIKDMIIRGGENVYP 445
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ HP V + GVPDER GEE+ + ++ A
Sbjct: 446 REIEEFLYGHPKVADVQVVGVPDERYGEEILACVIPRDPA 485
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 77/133 (57%), Gaps = 6/133 (4%)
Query: 358 ALTWPNSMDSEARIYHYKKYL----REEENITVPDSAGRSIFEKDQFVLREDGYGQVVGR 413
+T P E R Y L + + V D AGR + D V+REDGY QVVGR
Sbjct: 373 GVTLPRGSSGELRTRGYSVMLGYWDQPDRTADVVD-AGRWMHTGDLAVMREDGYVQVVGR 431
Query: 414 IKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNAD 472
IKDMIIRGGEN+YP+EIEEF+ HP V + GVPDER GEE+ + ++ A D
Sbjct: 432 IKDMIIRGGENVYPREIEEFLYGHPKVADVQVVGVPDERYGEEILACVIPRDPADPPTLD 491
Query: 473 DIRTFCKGKVSKF 485
+I +C+ +++ +
Sbjct: 492 EIFAYCRERLAHY 504
>gi|107024489|ref|YP_622816.1| AMP-binding protein [Burkholderia cenocepacia AU 1054]
gi|116688132|ref|YP_833755.1| AMP-binding domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|105894678|gb|ABF77843.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia AU
1054]
gi|116646221|gb|ABK06862.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
HI2424]
Length = 575
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 84/162 (51%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD + IVP G GEL +G+ MLGYW+D+ KT+E + D W+ TG
Sbjct: 396 LEVKIVDPSGDIVPVGATGELCTKGYSVMLGYWDDDAKTREVL-VDGWMHTG-------- 446
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L DGY +VGR+KDM+IRGGEN+YP+
Sbjct: 447 -----------------------------DLATLDADGYCNIVGRLKDMVIRGGENVYPR 477
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + A +GVPD + GEE+ I L+ + ++
Sbjct: 478 EIEEFLFRHPKIQSAQVFGVPDAKYGEELCAWIVLRADEQMT 519
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L DGY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + A +GVPD + GEE+
Sbjct: 447 DLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDAKYGEEL 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + ++ DD+R FC G+++ +
Sbjct: 507 CAWIVLRADEQMTEDDVRAFCTGQIAHY 534
>gi|444357091|ref|ZP_21158673.1| AMP-binding enzyme [Burkholderia cenocepacia BC7]
gi|443606649|gb|ELT74414.1| AMP-binding enzyme [Burkholderia cenocepacia BC7]
Length = 569
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 84/162 (51%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD + IVP G GEL +G+ MLGYW+D+ KT+E + D W+ TG
Sbjct: 390 LEVKIVDPSGDIVPVGATGELCTKGYSVMLGYWDDDAKTREVL-VDGWMHTG-------- 440
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L DGY +VGR+KDM+IRGGEN+YP+
Sbjct: 441 -----------------------------DLATLDADGYCNIVGRLKDMVIRGGENVYPR 471
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + A +GVPD + GEE+ I L+ + ++
Sbjct: 472 EIEEFLFRHPKIQSAQVFGVPDAKYGEELCAWIVLRADEQMT 513
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L DGY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + A +GVPD + GEE+
Sbjct: 441 DLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDAKYGEEL 500
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + ++ DD+R FC G+++ +
Sbjct: 501 CAWIVLRADEQMTEDDVRAFCNGQIAHY 528
>gi|381196620|ref|ZP_09903962.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
lwoffii WJ10621]
Length = 562
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 37/162 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD ++VP G GEL +RG+ MLGYWED +K++E I RW+ TG
Sbjct: 384 LEIKIVDEQGKVVPRGQLGELCVRGYSVMLGYWEDHEKSQEVIDSARWMHTG-------- 435
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E G+ ++ GRIKD++IRGGEN++PK
Sbjct: 436 -----------------------------DIAEMDEAGFVKIKGRIKDVVIRGGENLFPK 466
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIE+F+ THP+V + G+PD R GEE+ I L E+ ++
Sbjct: 467 EIEDFLYTHPDVSDVQVIGLPDARYGEELCACIILHEHHEIT 508
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Query: 381 EENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
E++ V DSA R + D + E G+ ++ GRIKD++IRGGEN++PKEIE+F+ THP+V
Sbjct: 420 EKSQEVIDSA-RWMHTGDIAEMDEAGFVKIKGRIKDVVIRGGENLFPKEIEDFLYTHPDV 478
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
+ G+PD R GEE+ I L E+ ++ + IR +C +S
Sbjct: 479 SDVQVIGLPDARYGEELCACIILHEHHEITEESIRQYCAEHIS 521
>gi|402569814|ref|YP_006619158.1| AMP-binding domain-containing protein [Burkholderia cepacia GG4]
gi|402251011|gb|AFQ51464.1| AMP-binding domain-containing protein [Burkholderia cepacia GG4]
Length = 572
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 84/162 (51%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD N +VP G GEL +G+ M GYW+D+ KT+ETI D W+ TG
Sbjct: 393 LEVKIVDPNGDVVPVGATGELCTKGYSVMPGYWDDDAKTQETI-VDGWMHTG-------- 443
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L DGY +VGR+KDM+IRGGENIYP+
Sbjct: 444 -----------------------------DLATLDADGYCNIVGRLKDMVIRGGENIYPR 474
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + +GVPD + GEE+ I L+ + +++
Sbjct: 475 EIEEFLFRHPKIQSVQVFGVPDAKYGEELCAWIVLRTDEQMS 516
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L DGY +VGR+KDM+IRGGENIYP+EIEEF+ HP + +GVPD + GEE+
Sbjct: 444 DLATLDADGYCNIVGRLKDMVIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDAKYGEEL 503
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + +++ DD+R FC G+++ +
Sbjct: 504 CAWIVLRTDEQMSEDDVRAFCHGQIAHY 531
>gi|241661951|ref|YP_002980311.1| AMP-binding domain-containing protein [Ralstonia pickettii 12D]
gi|240863978|gb|ACS61639.1| AMP-dependent synthetase and ligase [Ralstonia pickettii 12D]
Length = 571
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 91/183 (49%), Gaps = 42/183 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ Q K+VD +VP G GEL +G+ MLGYW+DE KT E+I
Sbjct: 376 DPLDKRVTTVGRIQPHLQVKLVDGAGEVVPVGEKGELCTKGYSVMLGYWDDEAKTAESIH 435
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+RTG D +GY +VG
Sbjct: 436 -DGWMRTG-------------------------------------DLATFDAEGYCNIVG 457
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK + A
Sbjct: 458 RVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLKPGQQ--AT 515
Query: 183 EDK 185
ED+
Sbjct: 516 EDE 518
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 57/81 (70%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
+GY +VGR+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK
Sbjct: 450 EGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLK 509
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+ D+IR FC+G+++ +
Sbjct: 510 PGQQATEDEIRAFCQGQIAHY 530
>gi|290956371|ref|YP_003487553.1| long-chain-fatty-acid-CoA ligase [Streptomyces scabiei 87.22]
gi|260645897|emb|CBG68988.1| putative long-chain-fatty-acid-CoA ligase [Streptomyces scabiei
87.22]
Length = 530
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 81/161 (50%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRIV-PFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + P GT GEL RG+ MLGYW + +KT E + RW+ TG
Sbjct: 357 IEVKVVDPVTGVTQPRGTAGELCTRGYSVMLGYWNEPEKTAEAVDAGRWMHTG------- 409
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D +REDGY ++VGRIKDMIIRGGENIYP
Sbjct: 410 ------------------------------DLATMREDGYVEIVGRIKDMIIRGGENIYP 439
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ HP + + GVP ER GEEV + E A+
Sbjct: 440 REIEEFLYGHPKIADVQVVGVPHERYGEEVLACVVPHEGAE 480
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E AGR + D +REDGY ++VGRIKDMIIRGGENIYP+EIEEF+
Sbjct: 389 YWNEPEKTAEAVDAGRWMHTGDLATMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYG 448
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
HP + + GVP ER GEEV + E A+ L +++R +C+G+++ +
Sbjct: 449 HPKIADVQVVGVPHERYGEEVLACVVPHEGAEPLTLEELRAYCEGRLAHY 498
>gi|206558442|ref|YP_002229202.1| AMP-binding domain-containing [Burkholderia cenocepacia J2315]
gi|421866790|ref|ZP_16298453.1| Long-chain-fatty-acid--CoA ligase [Burkholderia cenocepacia H111]
gi|444365685|ref|ZP_21165807.1| AMP-binding enzyme [Burkholderia cenocepacia K56-2Valvano]
gi|198034479|emb|CAR50344.1| putative long-chain-fatty-acid--CoA ligase [Burkholderia
cenocepacia J2315]
gi|358073275|emb|CCE49331.1| Long-chain-fatty-acid--CoA ligase [Burkholderia cenocepacia H111]
gi|443605797|gb|ELT73621.1| AMP-binding enzyme [Burkholderia cenocepacia K56-2Valvano]
Length = 575
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 84/162 (51%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD + IVP G GEL +G+ MLGYW+D+ KT+E + D W+ TG
Sbjct: 396 LEVKIVDPSGDIVPVGATGELCTKGYSVMLGYWDDDAKTREVL-VDGWMHTG-------- 446
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L DGY +VGR+KDM+IRGGEN+YP+
Sbjct: 447 -----------------------------DLATLDADGYCNIVGRLKDMVIRGGENVYPR 477
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + A +GVPD + GEE+ I L+ + ++
Sbjct: 478 EIEEFLFRHPKIQSAQVFGVPDAKYGEELCAWIVLRADEQMT 519
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L DGY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + A +GVPD + GEE+
Sbjct: 447 DLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDAKYGEEL 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + ++ DD+R FC G+++ +
Sbjct: 507 CAWIVLRADEQMTEDDVRAFCNGQIAHY 534
>gi|187927421|ref|YP_001897908.1| AMP-binding domain-containing protein [Ralstonia pickettii 12J]
gi|309779879|ref|ZP_07674633.1| AMP-binding enzyme [Ralstonia sp. 5_7_47FAA]
gi|404385126|ref|ZP_10985515.1| hypothetical protein HMPREF0989_01315 [Ralstonia sp. 5_2_56FAA]
gi|187724311|gb|ACD25476.1| AMP-dependent synthetase and ligase [Ralstonia pickettii 12J]
gi|308921238|gb|EFP66881.1| AMP-binding enzyme [Ralstonia sp. 5_7_47FAA]
gi|348616549|gb|EGY66049.1| hypothetical protein HMPREF0989_01315 [Ralstonia sp. 5_2_56FAA]
Length = 571
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 86/172 (50%), Gaps = 40/172 (23%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ Q K+VD +VP G GEL +G+ MLGYW+DE KT E+I
Sbjct: 376 DPLDKRVTTVGRIQPHLQVKLVDGAGEVVPVGEKGELCTKGYSVMLGYWDDEAKTAESIH 435
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+RTG D +GY +VG
Sbjct: 436 -DGWMRTG-------------------------------------DLATFDAEGYCNIVG 457
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
R+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK
Sbjct: 458 RVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLK 509
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 58/81 (71%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
+GY +VGR+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK
Sbjct: 450 EGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLK 509
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+ ++IRTFC+G+++ +
Sbjct: 510 PGQQATEEEIRTFCQGQIAHY 530
>gi|113869452|ref|YP_727941.1| acyl-CoA synthetase [Ralstonia eutropha H16]
gi|113528228|emb|CAJ94573.1| Long-chain-fatty-acid-CoA ligase [Ralstonia eutropha H16]
Length = 557
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 91/188 (48%), Gaps = 40/188 (21%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + KVVD +VP G GEL RG+ M GYWED+++T+E I
Sbjct: 368 DPLDKRVATVGRVQPHLECKVVDALGEVVPTGATGELCTRGYSVMQGYWEDDERTREAIR 427
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + ++GY +VG
Sbjct: 428 -DGWMHTG-------------------------------------DLATIDDEGYCNIVG 449
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGENIYP+EIEEF+ HP V +GVPD++ GEEV I LK
Sbjct: 450 RVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFGVPDQKYGEEVCAWIVLKPGQSATEE 509
Query: 183 EDKSISSD 190
E + D
Sbjct: 510 EIRKFCRD 517
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY +VGR+KDM+IRGGENIYP+EIEEF+ HP V +GVPD++ GEEV
Sbjct: 435 DLATIDDEGYCNIVGRVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFGVPDQKYGEEV 494
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I LK ++IR FC+ +++ +
Sbjct: 495 CAWIVLKPGQSATEEEIRKFCRDQIAHY 522
>gi|339326069|ref|YP_004685762.1| acyl-CoA synthetase [Cupriavidus necator N-1]
gi|338166226|gb|AEI77281.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Cupriavidus
necator N-1]
Length = 574
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 89/188 (47%), Gaps = 40/188 (21%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + ++VD VP G GEL RG+ MLGYW+DE +T E I
Sbjct: 379 DPLDKRTTTVGRIQPHLEVRIVDATGATVPVGETGELCTRGYSVMLGYWDDEARTAEAIR 438
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + +GY +VG
Sbjct: 439 -DGWMHTG-------------------------------------DLATIDAEGYCNIVG 460
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGENIYP+EIEEF+ HP V +GVPD++ GEEV I LK A
Sbjct: 461 RVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFGVPDQKYGEEVCAWIVLKPGASATED 520
Query: 183 EDKSISSD 190
E + D
Sbjct: 521 EIRDFCRD 528
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGR+KDM+IRGGENIYP+EIEEF+ HP V +GVPD++ GEEV
Sbjct: 446 DLATIDAEGYCNIVGRVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFGVPDQKYGEEV 505
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I LK A D+IR FC+ +++ +
Sbjct: 506 CAWIVLKPGASATEDEIRDFCRDQIAHY 533
>gi|309791565|ref|ZP_07686062.1| acyl-CoA synthase [Oscillochloris trichoides DG-6]
gi|308226386|gb|EFO80117.1| acyl-CoA synthase [Oscillochloris trichoides DG6]
Length = 564
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 95/203 (46%), Gaps = 50/203 (24%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P D Q T+ + K+++ R+VP G GEL RG+ MLGYW++E T+ I
Sbjct: 364 TPLDKQVGTVGQVHPHVEVKIINPLTGRMVPVGETGELCTRGYSVMLGYWDNESATRGAI 423
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
P RW+ TG D + ++GY +V
Sbjct: 424 DPGRWMHTG-------------------------------------DLATMDDEGYVNIV 446
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIKDMIIRGGEN+YP+EIEEF+ +HP V + GVPD + GEE+ IKLK
Sbjct: 447 GRIKDMIIRGGENVYPREIEEFLYSHPKVSDVQVIGVPDIKYGEEIMAWIKLKPGE---- 502
Query: 182 YEDKSISSDYHEFETMYDSIMAH 204
S+D E T +AH
Sbjct: 503 ------SADDEEIRTFCRGQIAH 519
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
GR + D + ++GY +VGRIKDMIIRGGEN+YP+EIEEF+ +HP V + GVPD
Sbjct: 426 GRWMHTGDLATMDDEGYVNIVGRIKDMIIRGGENVYPREIEEFLYSHPKVSDVQVIGVPD 485
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ GEE+ IKLK + ++IRTFC+G+++ +
Sbjct: 486 IKYGEEIMAWIKLKPGESADDEEIRTFCRGQIAHY 520
>gi|220918306|ref|YP_002493610.1| AMP-binding domain-containing protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219956160|gb|ACL66544.1| AMP-dependent synthetase and ligase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 546
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 85/168 (50%), Gaps = 38/168 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD RIVP GTPGEL RG+ MLGYW D T+E I RW+ TG
Sbjct: 363 EIKIVDPTTGRIVPRGTPGELCTRGYSVMLGYWRDPHATREAIDDGRWMHTG-------- 414
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E GY ++VGRIKDM++RGGENI+P+
Sbjct: 415 -----------------------------DLATIDEHGYVKIVGRIKDMVLRGGENIFPR 445
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
E+EEF+ T P V + GVPD + GEE+ +KL+ L E ++
Sbjct: 446 EVEEFLYTIPGVSDVQVIGVPDVKYGEELMAWVKLRPGVTLTGEEVRA 493
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 64/95 (67%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
GR + D + E GY ++VGRIKDM++RGGENI+P+E+EEF+ T P V + GVPD
Sbjct: 408 GRWMHTGDLATIDEHGYVKIVGRIKDMVLRGGENIFPREVEEFLYTIPGVSDVQVIGVPD 467
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ GEE+ +KL+ L +++R +CKGK++ +
Sbjct: 468 VKYGEELMAWVKLRPGVTLTGEEVRAYCKGKIATY 502
>gi|113867951|ref|YP_726440.1| AMP-binding domain protein [Ralstonia eutropha H16]
gi|113526727|emb|CAJ93072.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Ralstonia
eutropha H16]
Length = 574
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 89/188 (47%), Gaps = 40/188 (21%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + ++VD VP G GEL RG+ MLGYW+DE +T E I
Sbjct: 379 DPLDKRTTTVGRIQPHLEVRIVDATGATVPVGETGELCTRGYSVMLGYWDDEARTAEAIR 438
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + +GY +VG
Sbjct: 439 -DGWMHTG-------------------------------------DLATIDAEGYCNIVG 460
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGENIYP+EIEEF+ HP V +GVPD++ GEEV I LK A
Sbjct: 461 RVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFGVPDQKYGEEVCAWIVLKPGASATED 520
Query: 183 EDKSISSD 190
E + D
Sbjct: 521 EIRDFCRD 528
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGR+KDM+IRGGENIYP+EIEEF+ HP V +GVPD++ GEEV
Sbjct: 446 DLATIDAEGYCNIVGRVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFGVPDQKYGEEV 505
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I LK A D+IR FC+ +++ +
Sbjct: 506 CAWIVLKPGASATEDEIRDFCRDQIAHY 533
>gi|197123507|ref|YP_002135458.1| AMP-binding domain-containing protein [Anaeromyxobacter sp. K]
gi|196173356|gb|ACG74329.1| AMP-dependent synthetase and ligase [Anaeromyxobacter sp. K]
Length = 546
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 85/168 (50%), Gaps = 38/168 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD RIVP GTPGEL RG+ MLGYW D T+E I RW+ TG
Sbjct: 363 EIKIVDPTTGRIVPRGTPGELCTRGYSVMLGYWRDPHATREAIDDGRWMHTG-------- 414
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E GY ++VGRIKDM++RGGENI+P+
Sbjct: 415 -----------------------------DLATIDEHGYVKIVGRIKDMVLRGGENIFPR 445
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
E+EEF+ T P V + GVPD + GEE+ +KL+ L E ++
Sbjct: 446 EVEEFLYTIPGVSDVQVIGVPDVKYGEELMAWVKLRPGVSLTGDEMRA 493
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 64/95 (67%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
GR + D + E GY ++VGRIKDM++RGGENI+P+E+EEF+ T P V + GVPD
Sbjct: 408 GRWMHTGDLATIDEHGYVKIVGRIKDMVLRGGENIFPREVEEFLYTIPGVSDVQVIGVPD 467
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ GEE+ +KL+ L D++R +CKGK++ +
Sbjct: 468 VKYGEELMAWVKLRPGVSLTGDEMRAYCKGKIATY 502
>gi|297203377|ref|ZP_06920774.1| dicarboxylate-CoA ligase PimA [Streptomyces sviceus ATCC 29083]
gi|197711466|gb|EDY55500.1| dicarboxylate-CoA ligase PimA [Streptomyces sviceus ATCC 29083]
Length = 528
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 83/167 (49%), Gaps = 38/167 (22%)
Query: 19 FQAKVVDHNNRIV-PFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + P GT GEL RG+ MLGYW + +KT E + RW+ TG
Sbjct: 355 IEVKVVDPATGVTQPRGTAGELCTRGYSVMLGYWNEPEKTAEAVDQGRWMHTG------- 407
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D +REDGY ++VGRIKDMIIRGGENIYP
Sbjct: 408 ------------------------------DLATMREDGYVEIVGRIKDMIIRGGENIYP 437
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
+EIEEF+ HP + + GVP ER GEEV + ++ A E+
Sbjct: 438 REIEEFLYAHPKIADVQVVGVPHERYGEEVLACVIPRDPADPPTLEE 484
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E GR + D +REDGY ++VGRIKDMIIRGGENIYP+EIEEF+
Sbjct: 387 YWNEPEKTAEAVDQGRWMHTGDLATMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYA 446
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
HP + + GVP ER GEEV + ++ A +++R FC+G+++ +
Sbjct: 447 HPKIADVQVVGVPHERYGEEVLACVIPRDPADPPTLEELRGFCEGRLAHY 496
>gi|444430996|ref|ZP_21226167.1| putative fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
gi|443888045|dbj|GAC67888.1| putative fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
Length = 548
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 82/159 (51%), Gaps = 38/159 (23%)
Query: 19 FQAKVVDHNNR-IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ +VD R I+P G GEL RG+ MLGYWE KT E I DRW+ TG
Sbjct: 368 IEISIVDPVTREILPRGEAGELCTRGYSVMLGYWEQPDKTAEAIDADRWMHTG------- 420
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ +DGY + GRIKDM+IRGGEN+YP
Sbjct: 421 ------------------------------DIAVMDDDGYLSITGRIKDMVIRGGENLYP 450
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
+EIEEF+ THP+V + GVPDE+ GEE+ I+++
Sbjct: 451 REIEEFLITHPDVQDVQVIGVPDEKYGEELMAWIQMRAG 489
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ +DGY + GRIKDM+IRGGEN+YP+EIEEF+ THP+V + GVP
Sbjct: 413 ADRWMHTGDIAVMDDDGYLSITGRIKDMVIRGGENLYPREIEEFLITHPDVQDVQVIGVP 472
Query: 450 DERMGEEVGISIKLKE-NAKLNADDIRTFCKGKVSK 484
DE+ GEE+ I+++ L+ +R FC G++++
Sbjct: 473 DEKYGEELMAWIQMRAGTTALDVHTVRAFCDGRLAR 508
>gi|317419689|emb|CBN81726.1| Acyl-CoA synthetase family member 2, mitochondrial [Dicentrarchus
labrax]
Length = 554
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 84/169 (49%), Gaps = 38/169 (22%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVV+ +VP G GE++IRG+C ML YW D+ KT+E I W +TG
Sbjct: 392 LEVKVVNPTTGEVVPLGELGEIMIRGYCVMLEYWGDQAKTEECITKSGWYKTG------- 444
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D L Y ++ GRIKDM+IRGGENIYP
Sbjct: 445 ------------------------------DIGSLDAYSYCRIEGRIKDMLIRGGENIYP 474
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
EIE+F+ THP V EA GV D RMGEEV IKL + K A E K+
Sbjct: 475 AEIEQFLHTHPKVKEAQVVGVKDFRMGEEVCACIKLADGEKCTAEEIKA 523
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 58/79 (73%)
Query: 407 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 466
Y ++ GRIKDM+IRGGENIYP EIE+F+ THP V EA GV D RMGEEV IKL +
Sbjct: 454 YCRIEGRIKDMLIRGGENIYPAEIEQFLHTHPKVKEAQVVGVKDFRMGEEVCACIKLADG 513
Query: 467 AKLNADDIRTFCKGKVSKF 485
K A++I+ +CKG+++ F
Sbjct: 514 EKCTAEEIKAYCKGQIAHF 532
>gi|365872354|ref|ZP_09411892.1| AMP-binding domain protein [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|421051469|ref|ZP_15514463.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
CCUG 48898 = JCM 15300]
gi|363993499|gb|EHM14722.1| AMP-binding domain protein [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|392240072|gb|EIV65565.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
CCUG 48898]
Length = 546
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 85/157 (54%), Gaps = 38/157 (24%)
Query: 19 FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD ++ V G GEL RG+ MLGYW DE T+E + D W+ TG
Sbjct: 361 IEIKIVDPDSGETVQRGQSGELCTRGYSVMLGYWNDEAHTREVLDTDGWMHTG------- 413
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY ++GR+KDM+IRGGENIYP
Sbjct: 414 ------------------------------DLAVMREDGYCTIIGRLKDMVIRGGENIYP 443
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
+EIEEF+ THP++ + + GVPDE+ GEE+ ++++
Sbjct: 444 REIEEFLLTHPDIEDVHVVGVPDEKYGEELCAWVRMR 480
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+REDGY ++GR+KDM+IRGGENIYP+EIEEF+ THP++ + + GVPDE+ GEE+
Sbjct: 414 DLAVMREDGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVGVPDEKYGEEL 473
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSKF 485
++++ ++A IR F G+++ +
Sbjct: 474 CAWVRMRPGRVVIDAVAIRAFASGRLAHY 502
>gi|339327543|ref|YP_004687236.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator N-1]
gi|338167700|gb|AEI78755.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator N-1]
Length = 557
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 91/188 (48%), Gaps = 40/188 (21%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + KVVD +VP G GEL RG+ M GYWED+++T+E I
Sbjct: 368 DPLDKRVATVGRVQPHLECKVVDALGEVVPTGATGELCTRGYSVMQGYWEDDERTREAIR 427
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + + GY +VG
Sbjct: 428 -DGWMHTG-------------------------------------DLATIDDKGYCNIVG 449
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGENIYP+EIEEF+ HP V +GVPD++ GEEV I LK
Sbjct: 450 RVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFGVPDQKYGEEVCAWIVLKPGQSATED 509
Query: 183 EDKSISSD 190
E ++ D
Sbjct: 510 EIRTFCRD 517
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + + GY +VGR+KDM+IRGGENIYP+EIEEF+ HP V +GVPD++ GEEV
Sbjct: 435 DLATIDDKGYCNIVGRVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFGVPDQKYGEEV 494
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I LK D+IRTFC+ +++ +
Sbjct: 495 CAWIVLKPGQSATEDEIRTFCRDQIAHY 522
>gi|397680629|ref|YP_006522164.1| acyl-CoA synthetase YngI [Mycobacterium massiliense str. GO 06]
gi|414582915|ref|ZP_11440055.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-1215]
gi|418251261|ref|ZP_12877458.1| AMP-binding domain protein [Mycobacterium abscessus 47J26]
gi|420880763|ref|ZP_15344130.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0304]
gi|420886457|ref|ZP_15349817.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0421]
gi|420891999|ref|ZP_15355346.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0422]
gi|420895610|ref|ZP_15358949.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0708]
gi|420900054|ref|ZP_15363385.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0817]
gi|420905599|ref|ZP_15368917.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-1212]
gi|420933639|ref|ZP_15396913.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-151-0930]
gi|420937662|ref|ZP_15400931.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-152-0914]
gi|420943901|ref|ZP_15407156.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-153-0915]
gi|420947586|ref|ZP_15410836.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-154-0310]
gi|420954009|ref|ZP_15417251.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0626]
gi|420958183|ref|ZP_15421417.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0107]
gi|420963887|ref|ZP_15427111.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-1231]
gi|420973839|ref|ZP_15437030.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0921]
gi|420994126|ref|ZP_15457272.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0307]
gi|420999902|ref|ZP_15463037.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0912-R]
gi|421004424|ref|ZP_15467546.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0912-S]
gi|353449086|gb|EHB97485.1| AMP-binding domain protein [Mycobacterium abscessus 47J26]
gi|392079259|gb|EIU05086.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0422]
gi|392082220|gb|EIU08046.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0421]
gi|392085672|gb|EIU11497.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0304]
gi|392094922|gb|EIU20717.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0708]
gi|392097415|gb|EIU23209.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0817]
gi|392103503|gb|EIU29289.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-1212]
gi|392118067|gb|EIU43835.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-1215]
gi|392133502|gb|EIU59245.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-151-0930]
gi|392143177|gb|EIU68902.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-152-0914]
gi|392145507|gb|EIU71231.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-153-0915]
gi|392152922|gb|EIU78629.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0626]
gi|392154616|gb|EIU80322.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-154-0310]
gi|392161722|gb|EIU87412.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0921]
gi|392178684|gb|EIV04337.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0912-R]
gi|392180228|gb|EIV05880.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0307]
gi|392193127|gb|EIV18751.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0912-S]
gi|392246800|gb|EIV72277.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-1231]
gi|392247909|gb|EIV73385.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0107]
gi|395458894|gb|AFN64557.1| Putative acyl-CoA synthetase YngI [Mycobacterium massiliense str.
GO 06]
Length = 546
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 85/157 (54%), Gaps = 38/157 (24%)
Query: 19 FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD ++ V G GEL RG+ MLGYW DE T+E + D W+ TG
Sbjct: 361 IEIKIVDPDSGETVQRGQSGELCTRGYSVMLGYWNDEAHTREVLDTDGWMHTG------- 413
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY ++GR+KDM+IRGGENIYP
Sbjct: 414 ------------------------------DLAVMREDGYCTIIGRLKDMVIRGGENIYP 443
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
+EIEEF+ THP++ + + GVPDE+ GEE+ ++++
Sbjct: 444 REIEEFLLTHPDIEDVHVVGVPDEKYGEELCAWVRMR 480
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+REDGY ++GR+KDM+IRGGENIYP+EIEEF+ THP++ + + GVPDE+ GEE+
Sbjct: 414 DLAVMREDGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVGVPDEKYGEEL 473
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSKF 485
++++ ++A IR F G+++ +
Sbjct: 474 CAWVRMRPGRVVIDAVAIRAFASGRLAHY 502
>gi|163842182|ref|YP_001626587.1| long-chain-fatty-acid--CoA ligase [Renibacterium salmoninarum ATCC
33209]
gi|162955658|gb|ABY25173.1| long-chain-fatty-acid--CoA ligase [Renibacterium salmoninarum ATCC
33209]
Length = 315
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 81/160 (50%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KV+D + VP TPGEL RG+ MLGYW D K+ E I RW+ TG
Sbjct: 136 LEVKVIDPTTGLTVPRDTPGELCTRGYSVMLGYWNDPAKSGEAIDAARWMHTG------- 188
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D +R DGY + GRIKDM+IRGGEN+YP
Sbjct: 189 ------------------------------DLAEMRGDGYLNIFGRIKDMVIRGGENLYP 218
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ THP++ + GVPDE+ GEE+ I L+ A
Sbjct: 219 REIEEFLYTHPDIADVQVVGVPDEKYGEELCAWITLRAGA 258
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D +R DGY + GRIKDM+IRGGEN+YP+EIEEF+ THP++ + GVP
Sbjct: 181 AARWMHTGDLAEMRGDGYLNIFGRIKDMVIRGGENLYPREIEEFLYTHPDIADVQVVGVP 240
Query: 450 DERMGEEVGISIKLKEN-AKLNADDIRTFCKGKVSK 484
DE+ GEE+ I L+ A L+ +I FC GK+SK
Sbjct: 241 DEKYGEELCAWITLRAGAAALDQTEIADFCSGKLSK 276
>gi|239991727|ref|ZP_04712391.1| acyl-CoA synthetase [Streptomyces roseosporus NRRL 11379]
gi|291448729|ref|ZP_06588119.1| acyl-CoA synthetase [Streptomyces roseosporus NRRL 15998]
gi|291351676|gb|EFE78580.1| acyl-CoA synthetase [Streptomyces roseosporus NRRL 15998]
Length = 547
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 78/150 (52%), Gaps = 38/150 (25%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + +P G+ GEL RG+ MLGYW+ +T E I RW+ TG
Sbjct: 363 IEVKVVDPVTGVTLPRGSSGELRTRGYSVMLGYWDQPDRTAEVIDAGRWMHTG------- 415
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ EDGY QVVGRIKDMIIRGGEN+YP
Sbjct: 416 ------------------------------DLAVMGEDGYVQVVGRIKDMIIRGGENVYP 445
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
+EIEEF+ HP + + GVPDER GEE+
Sbjct: 446 REIEEFLHGHPKIADVQVVGVPDERYGEEI 475
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 74/136 (54%), Gaps = 12/136 (8%)
Query: 358 ALTWPNSMDSEARIYHYKKYL-------REEENITVPDSAGRSIFEKDQFVLREDGYGQV 410
+T P E R Y L R E I AGR + D V+ EDGY QV
Sbjct: 373 GVTLPRGSSGELRTRGYSVMLGYWDQPDRTAEVI----DAGRWMHTGDLAVMGEDGYVQV 428
Query: 411 VGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA-KL 469
VGRIKDMIIRGGEN+YP+EIEEF+ HP + + GVPDER GEE+ + ++ A
Sbjct: 429 VGRIKDMIIRGGENVYPREIEEFLHGHPKIADVQVVGVPDERYGEEILACVIPRDPADPP 488
Query: 470 NADDIRTFCKGKVSKF 485
+++ C+ +++ +
Sbjct: 489 TLEELTEHCRERLAHY 504
>gi|411007068|ref|ZP_11383397.1| AMP-binding domain protein [Streptomyces globisporus C-1027]
Length = 535
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 78/150 (52%), Gaps = 38/150 (25%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + +P G+ GEL RG+ MLGYW+ +T E I RW+ TG
Sbjct: 363 IEVKVVDPVTGVTLPRGSSGELRTRGYSVMLGYWDQPDRTAEVIDAGRWMHTG------- 415
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ EDGY QVVGRIKDMIIRGGEN+YP
Sbjct: 416 ------------------------------DLAVMGEDGYVQVVGRIKDMIIRGGENVYP 445
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
+EIEEF+ HP + + GVPDER GEE+
Sbjct: 446 REIEEFLHGHPKIADVQVVGVPDERYGEEI 475
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 74/136 (54%), Gaps = 12/136 (8%)
Query: 358 ALTWPNSMDSEARIYHYKKYL-------REEENITVPDSAGRSIFEKDQFVLREDGYGQV 410
+T P E R Y L R E I AGR + D V+ EDGY QV
Sbjct: 373 GVTLPRGSSGELRTRGYSVMLGYWDQPDRTAEVI----DAGRWMHTGDLAVMGEDGYVQV 428
Query: 411 VGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA-KL 469
VGRIKDMIIRGGEN+YP+EIEEF+ HP + + GVPDER GEE+ + ++ A
Sbjct: 429 VGRIKDMIIRGGENVYPREIEEFLHGHPKIADVQVVGVPDERYGEEILACVIPRDPADPP 488
Query: 470 NADDIRTFCKGKVSKF 485
+++ C+ +++ +
Sbjct: 489 TLEELTEHCRERLAHY 504
>gi|378549663|ref|ZP_09824879.1| hypothetical protein CCH26_06240 [Citricoccus sp. CH26A]
Length = 552
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 96/190 (50%), Gaps = 50/190 (26%)
Query: 1 MWDMNPTDLQFSTLSS------------SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNM 47
M + +P +Q ST S + + +VVD +VP G GEL +G+ M
Sbjct: 336 MTETSPVSIQSSTSDSLERRVSTVGRVGAHLRIRVVDPATGEVVPRGQAGELQTQGYAVM 395
Query: 48 LGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVS 107
GYW D ++T E I + W+ TG
Sbjct: 396 KGYWNDPERTAEAIDAEGWMHTG------------------------------------- 418
Query: 108 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
D V+ E+GY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++++A GVPDE+ GEE+
Sbjct: 419 DLGVMDEEGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDIIDAQVVGVPDEKYGEEL 478
Query: 168 GISIKLKENA 177
I+++E A
Sbjct: 479 IAWIRIREGA 488
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++++A GVPDE+ GEE+
Sbjct: 419 DLGVMDEEGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDIIDAQVVGVPDEKYGEEL 478
Query: 458 GISIKLKENAKL-NADDIRTFCKGKVSKF 485
I+++E A A+ +R +C G+++ +
Sbjct: 479 IAWIRIREGADAPTAESLREYCSGRIAHY 507
>gi|383642924|ref|ZP_09955330.1| AMP-binding domain protein [Streptomyces chartreusis NRRL 12338]
Length = 532
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 78/150 (52%), Gaps = 38/150 (25%)
Query: 19 FQAKVVDHNNRIV-PFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + P GT GEL RG+ MLGYW + +KT E + RW+ TG
Sbjct: 357 IEVKIVDPATGVTRPRGTAGELCTRGYSVMLGYWNEPEKTAEAVDAGRWMHTG------- 409
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY ++VGRIKDMIIRGGENIYP
Sbjct: 410 ------------------------------DLAVMREDGYVEIVGRIKDMIIRGGENIYP 439
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
+EIEEF+ HP + + GVP +R GEEV
Sbjct: 440 REIEEFLYAHPKIQDVQVVGVPHDRYGEEV 469
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E AGR + D V+REDGY ++VGRIKDMIIRGGENIYP+EIEEF+
Sbjct: 389 YWNEPEKTAEAVDAGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYA 448
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
HP + + GVP +R GEEV + + A L D++RTFC+G+++ +
Sbjct: 449 HPKIQDVQVVGVPHDRYGEEVLACVIPHDPADPLTLDELRTFCQGRLAHY 498
>gi|186477771|ref|YP_001859241.1| AMP-binding domain-containing protein [Burkholderia phymatum
STM815]
gi|184194230|gb|ACC72195.1| AMP-dependent synthetase and ligase [Burkholderia phymatum STM815]
Length = 576
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 89/179 (49%), Gaps = 40/179 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + K++D IVP G GEL RG+ M GYW DE KT+E+I
Sbjct: 381 DPLDKRTTTVGRIQPHLEVKIIDPLGDIVPVGETGELCTRGYSVMKGYWGDEAKTQESI- 439
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + DGY +VG
Sbjct: 440 VDGWMHTG-------------------------------------DLATIDADGYCNIVG 462
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
R+KDM+IRGGENIYP+EIEEF+ HP + A +GVPD + GEEV + L+ +L A
Sbjct: 463 RLKDMLIRGGENIYPREIEEFLFRHPKIQSAQVFGVPDAKYGEEVCAWVVLRSGERLTA 521
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + DGY +VGR+KDM+IRGGENIYP+EIEEF+ HP + A +GVPD + GEEV
Sbjct: 448 DLATIDADGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSAQVFGVPDAKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ L+ +L A+D++ FC+G+++ +
Sbjct: 508 CAWVVLRSGERLTAEDLQEFCRGQIAHY 535
>gi|118353005|ref|XP_001009773.1| AMP-binding enzyme family protein [Tetrahymena thermophila]
gi|89291540|gb|EAR89528.1| AMP-binding enzyme family protein [Tetrahymena thermophila SB210]
Length = 589
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 89/160 (55%), Gaps = 37/160 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+AK+++ +I+ G GEL IRG+ M YW D + T +TI + WL+TG
Sbjct: 403 EAKIINSKGKILERGQSGELCIRGYPVMQKYWADIRNTNKTIDTNGWLKTG--------- 453
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ + GY ++VGRIK+MIIRGGENIYPKE
Sbjct: 454 ----------------------------DVAVMDDRGYVKIVGRIKEMIIRGGENIYPKE 485
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKL 179
IEEF++THP++++ GVP+++ GEE I+LK+N ++
Sbjct: 486 IEEFLRTHPSIMDVQVVGVPNQKFGEETFALIRLKQNQEV 525
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 67/88 (76%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ + GY ++VGRIK+MIIRGGENIYPKEIEEF++THP++++ GVP+++ GEE
Sbjct: 454 DVAVMDDRGYVKIVGRIKEMIIRGGENIYPKEIEEFLRTHPSIMDVQVVGVPNQKFGEET 513
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+N ++ DI FCKG+++ +
Sbjct: 514 FALIRLKQNQEVKPLDIAEFCKGQIAHY 541
>gi|355666783|gb|AER93651.1| acyl-CoA synthetase family member 2 [Mustela putorius furo]
Length = 616
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 90/170 (52%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ ++V TPGEL IRG+C MLGYW + QKT+E IG D+W RTG
Sbjct: 442 EAQIVNVKTGKLVELNTPGELWIRGYCVMLGYWGEPQKTEEIIGQDKWYRTG-------- 493
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D ++ + G+ ++VGR KDMIIRGGENIYP
Sbjct: 494 -----------------------------DIAMMDKQGFCKIVGRSKDMIIRGGENIYPA 524
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F THP V E GV D RMGEE+ I+LK+ K E K+
Sbjct: 525 ELEDFFHTHPQVQEVQVVGVKDYRMGEEICACIRLKKGEKTTEEEIKAFC 574
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ + G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D RMGEE+
Sbjct: 494 DIAMMDKQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDYRMGEEI 553
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ K ++I+ FCKGK+S F
Sbjct: 554 CACIRLKKGEKTTEEEIKAFCKGKISHF 581
>gi|110678441|ref|YP_681448.1| long chain fatty acid acyl-CoA ligase [Roseobacter denitrificans
OCh 114]
gi|109454557|gb|ABG30762.1| putative long chain fatty acid acyl-CoA ligase [Roseobacter
denitrificans OCh 114]
Length = 565
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 81/161 (50%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD V G GELL RG+ MLGYWED+ +T +I W+ TG +
Sbjct: 391 EVKIVDATGNTVKTGEQGELLTRGYSVMLGYWEDDAQTAASIDAQGWMHTGDLAR----- 445
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
L DG+ + GR+KDMI+RGGENIYP+E
Sbjct: 446 --------------------------------LDADGFCTITGRLKDMILRGGENIYPRE 473
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEEF+ THP++L+A +G+PD ++GE V I + + L
Sbjct: 474 IEEFLYTHPDILQAQVFGIPDHKLGEAVCAWIVARAGSDLT 514
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 59/84 (70%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
L DG+ + GR+KDMI+RGGENIYP+EIEEF+ THP++L+A +G+PD ++GE V I
Sbjct: 446 LDADGFCTITGRLKDMILRGGENIYPREIEEFLYTHPDILQAQVFGIPDHKLGEAVCAWI 505
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
+ + L D++ FC+ ++ F
Sbjct: 506 VARAGSDLTETDVQDFCRSAIAHF 529
>gi|262201331|ref|YP_003272539.1| AMP-dependent synthetase and ligase [Gordonia bronchialis DSM
43247]
gi|262084678|gb|ACY20646.1| AMP-dependent synthetase and ligase [Gordonia bronchialis DSM
43247]
Length = 542
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 91/183 (49%), Gaps = 40/183 (21%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ +T+ + KVVD +P G GE RG+ M GYW +KT E I
Sbjct: 348 DPLELRVTTVGRVGPHLEIKVVDPVTGETLPRGETGEFCTRGYSVMKGYWNQPEKTAEAI 407
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ TG D V+ DGY +
Sbjct: 408 DGDGWMHTG-------------------------------------DLAVMAPDGYVAIT 430
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+ ++L++ A
Sbjct: 431 GRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWVRLRKPATDLT 490
Query: 182 YED 184
ED
Sbjct: 491 AED 493
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ DGY + GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+
Sbjct: 417 DLAVMAPDGYVAITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEEL 476
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVS 483
++L++ A L A+D+R F GK++
Sbjct: 477 MAWVRLRKPATDLTAEDVREFATGKIA 503
>gi|354612743|ref|ZP_09030685.1| Long-chain-fatty-acid--CoA ligase [Saccharomonospora
paurometabolica YIM 90007]
gi|353222881|gb|EHB87176.1| Long-chain-fatty-acid--CoA ligase [Saccharomonospora
paurometabolica YIM 90007]
Length = 551
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 90/173 (52%), Gaps = 40/173 (23%)
Query: 8 DLQFSTLS--SSSFQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPD 64
D + ST+ + K+VD + VP G GEL RG+ MLGYW+ ++T E I
Sbjct: 353 DRRVSTVGRVGPHLEIKIVDPATGLTVPRGHTGELCTRGYSVMLGYWDQPEQTAEVIDAA 412
Query: 65 RWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRI 124
RW+ TG D V+ ++GY V GR
Sbjct: 413 RWMHTG-------------------------------------DLAVMDDEGYVAVTGRS 435
Query: 125 KDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
KDM+IRGGENIYP+EIEEF+ THP++L+A GVPDER GEE+ ++L++ A
Sbjct: 436 KDMVIRGGENIYPREIEEFLHTHPDILDAQVIGVPDERYGEELMAWVQLRDPA 488
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
Query: 358 ALTWPNSMDSEARIYHYKKYL----REEENITVPDSAGRSIFEKDQFVLREDGYGQVVGR 413
LT P E Y L + E+ V D+A R + D V+ ++GY V GR
Sbjct: 376 GLTVPRGHTGELCTRGYSVMLGYWDQPEQTAEVIDAA-RWMHTGDLAVMDDEGYVAVTGR 434
Query: 414 IKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNAD 472
KDM+IRGGENIYP+EIEEF+ THP++L+A GVPDER GEE+ ++L++ A L A+
Sbjct: 435 SKDMVIRGGENIYPREIEEFLHTHPDILDAQVIGVPDERYGEELMAWVQLRDPAPTLTAE 494
Query: 473 DIRTFCKGKVSKF 485
+R FC G+++ +
Sbjct: 495 ALREFCAGRLAHY 507
>gi|381167211|ref|ZP_09876419.1| Acyl-CoA synthetase family member 2, mitochondrial [Phaeospirillum
molischianum DSM 120]
gi|380683519|emb|CCG41231.1| Acyl-CoA synthetase family member 2, mitochondrial [Phaeospirillum
molischianum DSM 120]
Length = 564
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 84/161 (52%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+AKVVD RIVP G GELL RG+ M GYW +E T++ I RW+ TG
Sbjct: 385 EAKVVDPQGRIVPRGVSGELLARGYSVMRGYWGEEDLTRQAIDSGRWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ +GY +VGRIKDM+IRGGENIYP+E
Sbjct: 436 ----------------------------DLAVIDAEGYCNIVGRIKDMVIRGGENIYPRE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
+EEF+ HP + + +G+PD + GE++ + LK++ +
Sbjct: 468 VEEFLYRHPKIRDIQVFGIPDRQYGEQLCAWVVLKDDEDMT 508
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 70/111 (63%)
Query: 375 KKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFI 434
+ Y EE+ +GR + D V+ +GY +VGRIKDM+IRGGENIYP+E+EEF+
Sbjct: 413 RGYWGEEDLTRQAIDSGRWMHTGDLAVIDAEGYCNIVGRIKDMVIRGGENIYPREVEEFL 472
Query: 435 QTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
HP + + +G+PD + GE++ + LK++ + D+ +FC G+++ +
Sbjct: 473 YRHPKIRDIQVFGIPDRQYGEQLCAWVVLKDDEDMTEADLISFCVGEIAHY 523
>gi|444517741|gb|ELV11759.1| Acyl-CoA synthetase family member 2, mitochondrial [Tupaia
chinensis]
Length = 620
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 90/170 (52%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+V+ + +++ TPGEL IRG+C MLGYW + +KT+E +G D+W TG
Sbjct: 446 EAKIVNVEDGKLLELNTPGELCIRGYCVMLGYWGEPEKTQEAVGQDKWYWTG-------- 497
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E G+ ++VGR KDMIIRGGENIYP
Sbjct: 498 -----------------------------DIATMDEQGFCKIVGRSKDMIIRGGENIYPA 528
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F THP V E GV D+RMGEE+ I+LK + A E K+
Sbjct: 529 ELEDFFHTHPQVQEVQVVGVKDDRMGEEICACIRLKSGEETTAEEIKAFC 578
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 498 DIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDDRMGEEI 557
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK + A++I+ FCKGK+S F
Sbjct: 558 CACIRLKSGEETTAEEIKAFCKGKISHF 585
>gi|52080516|ref|YP_079307.1| AMP-binding protein [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319645522|ref|ZP_07999754.1| YngI protein [Bacillus sp. BT1B_CT2]
gi|404489403|ref|YP_006713509.1| AMP-binding protein [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423682474|ref|ZP_17657313.1| AMP-binding protein [Bacillus licheniformis WX-02]
gi|52003727|gb|AAU23669.1| AMP-dependent synthetase and ligase [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|52348397|gb|AAU41031.1| aceto-acyl-CoA ligase YngI [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317392408|gb|EFV73203.1| YngI protein [Bacillus sp. BT1B_CT2]
gi|383439248|gb|EID47023.1| AMP-binding protein [Bacillus licheniformis WX-02]
Length = 545
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 77/118 (65%), Gaps = 3/118 (2%)
Query: 370 RIYHYKK--YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYP 427
R YH K Y E V D G + D V+ E+GY ++ GR+KDMIIRGGENIYP
Sbjct: 394 RGYHVMKGYYKNPEATAAVIDEDG-FLHTGDLAVMDEEGYCRITGRLKDMIIRGGENIYP 452
Query: 428 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+EIEEF+ HP++L+ GVPDE GEEV IKLK A + AD+++ +CKGK++++
Sbjct: 453 REIEEFLYKHPDILDVQIVGVPDETFGEEVSAWIKLKSGASMTADELKEYCKGKIARY 510
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 80/159 (50%), Gaps = 37/159 (23%)
Query: 27 NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRR 86
NR V G GEL RG+ M GY+++ + T I D +L TG
Sbjct: 379 TNREVERGVQGELCTRGYHVMKGYYKNPEATAAVIDEDGFLHTG---------------- 422
Query: 87 KLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 146
D V+ E+GY ++ GR+KDMIIRGGENIYP+EIEEF+
Sbjct: 423 ---------------------DLAVMDEEGYCRITGRLKDMIIRGGENIYPREIEEFLYK 461
Query: 147 HPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
HP++L+ GVPDE GEEV IKLK A + A E K
Sbjct: 462 HPDILDVQIVGVPDETFGEEVSAWIKLKSGASMTADELK 500
>gi|410980755|ref|XP_003996741.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Felis catus]
Length = 615
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 87/170 (51%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++VD + T GEL IRG+C MLGYW + QKT+E IG D+W TG
Sbjct: 441 EAQIVDMKTGTLAELNTSGELCIRGYCVMLGYWGEPQKTEEAIGQDKWYHTG-------- 492
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ G+ ++VGR KDMIIRGGENIYP
Sbjct: 493 -----------------------------DIAVMDNQGFCKIVGRSKDMIIRGGENIYPA 523
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F THP V E GV D+RMGEE+ I+LK+ K A E K+
Sbjct: 524 ELEDFFHTHPQVQEVQVVGVKDDRMGEEICACIRLKKGEKTTAEEIKAFC 573
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 493 DIAVMDNQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDDRMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ K A++I+ FCKGK+S F
Sbjct: 553 CACIRLKKGEKTTAEEIKAFCKGKISHF 580
>gi|9957179|gb|AAG09247.1|AF176639_1 long chain fatty acid-CoA ligase [Pseudomonas stutzeri]
Length = 567
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 91/179 (50%), Gaps = 39/179 (21%)
Query: 5 NPTDLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P +L+ +++ + + K+VD +VP G GEL RG+ MLGYW +++ T+E+I
Sbjct: 370 DPLELRVASVGRTQPHLETKLVDEQGNVVPRGQIGELCTRGYSVMLGYWNNQEATQESID 429
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
+W+ +G D V+ E GY +VG
Sbjct: 430 EAKWMHSG-------------------------------------DLAVMDEAGYVSIVG 452
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
R KDMIIRGGEN+YP+EIEEF+ HP V + G+PD + GEEV +KL + L A
Sbjct: 453 RNKDMIIRGGENVYPREIEEFLFGHPAVADVQVVGIPDSKYGEEVAAWVKLHPDQALTA 511
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY +VGR KDMIIRGGEN+YP+EIEEF+ HP V + G+PD + GEEV
Sbjct: 438 DLAVMDEAGYVSIVGRNKDMIIRGGENVYPREIEEFLFGHPAVADVQVVGIPDSKYGEEV 497
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+KL + L A+ + +CKG+++ F
Sbjct: 498 AAWVKLHPDQALTAEALAEYCKGRIAHF 525
>gi|148554368|ref|YP_001261950.1| AMP-dependent synthetase and ligase [Sphingomonas wittichii RW1]
gi|148499558|gb|ABQ67812.1| AMP-dependent synthetase and ligase [Sphingomonas wittichii RW1]
Length = 596
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 90/189 (47%), Gaps = 39/189 (20%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P +L+ T+ + K+VD VP G GEL RG+ MLGYW D ++T I
Sbjct: 364 DPVELRVGTVGRVHPHLEVKIVDDAGETVPRGVAGELCTRGYSVMLGYWNDPEQTAAAID 423
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ +G D + EDGY ++VG
Sbjct: 424 DAGWMHSG-------------------------------------DLATIDEDGYCRIVG 446
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
RIKDM+IRGGEN+YP+EIEEF+ THP + + +GVPD GEE+ I + A ++
Sbjct: 447 RIKDMVIRGGENLYPREIEEFLHTHPAIRDVAVFGVPDRHYGEELCAWIIRHDGAPIDET 506
Query: 183 EDKSISSDY 191
E ++ +
Sbjct: 507 EVRAFCRGH 515
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Query: 381 EENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
E+ D AG + D + EDGY ++VGRIKDM+IRGGEN+YP+EIEEF+ THP +
Sbjct: 416 EQTAAAIDDAG-WMHSGDLATIDEDGYCRIVGRIKDMVIRGGENLYPREIEEFLHTHPAI 474
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
+ +GVPD GEE+ I + A ++ ++R FC+G +S
Sbjct: 475 RDVAVFGVPDRHYGEELCAWIIRHDGAPIDETEVRAFCRGHIS 517
>gi|307104380|gb|EFN52634.1| hypothetical protein CHLNCDRAFT_26610 [Chlorella variabilis]
Length = 595
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 89/177 (50%), Gaps = 40/177 (22%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P D Q +T+ +AKVVD N +P G GEL +RG+ MLGYW D T +
Sbjct: 392 DPVDRQATTVGRIHPHLEAKVVDPATNLTLPRGQVGELCVRGYSVMLGYWADAPATARSF 451
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
DR++ TG D +L + GY +V
Sbjct: 452 DADRFMHTG-------------------------------------DLAILDDKGYCSIV 474
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
GRIKDM+IRGGEN+YP+EIEEF+ HP + + +GVPD + GEE+ ++L+E +
Sbjct: 475 GRIKDMVIRGGENLYPREIEEFLHHHPAIADVQVFGVPDVKHGEELCAWVRLREGQR 531
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D +L + GY +VGRIKDM+IRGGEN+YP+EIEEF+ HP + + +GVP
Sbjct: 453 ADRFMHTGDLAILDDKGYCSIVGRIKDMVIRGGENLYPREIEEFLHHHPAIADVQVFGVP 512
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVS 483
D + GEE+ ++L+E + + +++R FCKG++S
Sbjct: 513 DVKHGEELCAWVRLREGQRHIGGEELRAFCKGRIS 547
>gi|337267218|ref|YP_004611273.1| AMP-dependent synthetase and ligase [Mesorhizobium opportunistum
WSM2075]
gi|336027528|gb|AEH87179.1| AMP-dependent synthetase and ligase [Mesorhizobium opportunistum
WSM2075]
Length = 590
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 82/170 (48%), Gaps = 37/170 (21%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K VD + V G PGEL RG+ M GYW+D+ KT+E I D W+ TG
Sbjct: 411 EVKAVDADGATVAVGAPGELCTRGYSVMKGYWDDDDKTREAIDSDGWMHTG--------- 461
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +GY +VGR+KDM+IRGGEN+YP+E
Sbjct: 462 ----------------------------DLATIDAEGYCNIVGRVKDMVIRGGENVYPRE 493
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
+EEF+ HP V E +G+PD + GEE+ I LK E K+ S
Sbjct: 494 VEEFLYRHPKVREVQVFGIPDTKYGEELCAWIVLKPGQIATEQEIKNFCS 543
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGR+KDM+IRGGEN+YP+E+EEF+ HP V E +G+PD + GEE+
Sbjct: 462 DLATIDAEGYCNIVGRVKDMVIRGGENVYPREVEEFLYRHPKVREVQVFGIPDTKYGEEL 521
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I LK +I+ FC G+++ +
Sbjct: 522 CAWIVLKPGQIATEQEIKNFCSGQIAHY 549
>gi|452747632|ref|ZP_21947425.1| AMP-binding domain protein [Pseudomonas stutzeri NF13]
gi|452008376|gb|EME00616.1| AMP-binding domain protein [Pseudomonas stutzeri NF13]
Length = 560
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 84/165 (50%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++K+VD + +VP G GEL RG+ MLGYW + T+E I RW+ TG
Sbjct: 382 LESKIVDEHGAVVPRGQIGELCTRGYSVMLGYWNNPDATREAIDGARWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ ++GY ++VGR KDMIIRGGEN+YP+
Sbjct: 434 -----------------------------DLAVMDDEGYIKIVGRNKDMIIRGGENVYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
EIEEF+ THP V + GVPD + GEE+ +KL + A E
Sbjct: 465 EIEEFLFTHPAVADVQVIGVPDSKFGEEIVAWVKLHPGHQAEAEE 509
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
R + D V+ ++GY ++VGR KDMIIRGGEN+YP+EIEEF+ THP V + GVP
Sbjct: 426 GARWMHTGDLAVMDDEGYIKIVGRNKDMIIRGGENVYPREIEEFLFTHPAVADVQVIGVP 485
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
D + GEE+ +KL + A+++R FCKG+++ F
Sbjct: 486 DSKFGEEIVAWVKLHPGHQAEAEELREFCKGRIAHF 521
>gi|221202175|ref|ZP_03575210.1| AMP-binding domain protein [Burkholderia multivorans CGD2M]
gi|221208764|ref|ZP_03581763.1| AMP-binding domain protein [Burkholderia multivorans CGD2]
gi|221171396|gb|EEE03844.1| AMP-binding domain protein [Burkholderia multivorans CGD2]
gi|221177969|gb|EEE10381.1| AMP-binding domain protein [Burkholderia multivorans CGD2M]
Length = 575
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD + IVP G GEL +G+ MLGYW+D+ KT+E + D W+ TG
Sbjct: 396 LEVKIVDPSGEIVPVGVTGELCTKGYSVMLGYWDDDAKTREVL-IDGWMHTG-------- 446
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L +GY +VGR+KDM+IRGGEN+YP+
Sbjct: 447 -----------------------------DLATLDAEGYCNIVGRLKDMVIRGGENVYPR 477
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + A +GVPD + GEE+ I L+ + ++
Sbjct: 478 EIEEFLFRHPKIQSAQVFGVPDPKYGEELCAWIVLRADEQMT 519
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L +GY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + A +GVPD + GEE+
Sbjct: 447 DLATLDAEGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDPKYGEEL 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + ++ DD+R FC+G+++ +
Sbjct: 507 CAWIVLRADEQMTEDDVRAFCQGQIAHY 534
>gi|161523288|ref|YP_001578300.1| AMP-binding domain-containing protein [Burkholderia multivorans
ATCC 17616]
gi|189351939|ref|YP_001947567.1| AMP-binding domain protein [Burkholderia multivorans ATCC 17616]
gi|160340717|gb|ABX13803.1| AMP-dependent synthetase and ligase [Burkholderia multivorans ATCC
17616]
gi|189335961|dbj|BAG45031.1| long-chain fatty-acid-CoA ligase [Burkholderia multivorans ATCC
17616]
Length = 575
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD + IVP G GEL +G+ MLGYW+D+ KT+E + D W+ TG
Sbjct: 396 LEVKIVDPSGEIVPVGVTGELCTKGYSVMLGYWDDDAKTREVL-IDGWMHTG-------- 446
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L +GY +VGR+KDM+IRGGEN+YP+
Sbjct: 447 -----------------------------DLATLDAEGYCNIVGRLKDMVIRGGENVYPR 477
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + A +GVPD + GEE+ I L+ + ++
Sbjct: 478 EIEEFLFRHPKIQSAQVFGVPDPKYGEELCAWIVLRADEQMT 519
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L +GY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + A +GVPD + GEE+
Sbjct: 447 DLATLDAEGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDPKYGEEL 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + ++ DD+R FC+G+++ +
Sbjct: 507 CAWIVLRADEQMTEDDVRAFCQGQIAHY 534
>gi|339495326|ref|YP_004715619.1| AMP-binding domain-containing protein [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
gi|338802698|gb|AEJ06530.1| AMP-binding domain protein [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 560
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 84/163 (51%), Gaps = 37/163 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++K+VD + +VP G GEL RG+ MLGYW + T+E I RW+ TG
Sbjct: 382 LESKIVDEHGAVVPRGQIGELCTRGYSVMLGYWNNPDATREAIDGARWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ ++GY ++VGR KDMIIRGGEN+YP+
Sbjct: 434 -----------------------------DLAVMDDEGYIKIVGRNKDMIIRGGENVYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
EIEEF+ THP V + GVPD + GEE+ +KL ++ A
Sbjct: 465 EIEEFLFTHPAVADVQVIGVPDSKFGEEIVAWVKLHPGHQVEA 507
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
R + D V+ ++GY ++VGR KDMIIRGGEN+YP+EIEEF+ THP V + GVP
Sbjct: 426 GARWMHTGDLAVMDDEGYIKIVGRNKDMIIRGGENVYPREIEEFLFTHPAVADVQVIGVP 485
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
D + GEE+ +KL ++ A+ +R FCKG+++ F
Sbjct: 486 DSKFGEEIVAWVKLHPGHQVEAEALREFCKGRIAHF 521
>gi|386021952|ref|YP_005939977.1| AMP-binding protein [Pseudomonas stutzeri DSM 4166]
gi|327481925|gb|AEA85235.1| AMP-binding domain protein [Pseudomonas stutzeri DSM 4166]
Length = 560
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 84/163 (51%), Gaps = 37/163 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++K+VD + +VP G GEL RG+ MLGYW + T+E I RW+ TG
Sbjct: 382 LESKIVDEHGAVVPRGQIGELCTRGYSVMLGYWNNPDATREAIDGARWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ ++GY ++VGR KDMIIRGGEN+YP+
Sbjct: 434 -----------------------------DLAVMDDEGYIKIVGRNKDMIIRGGENVYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
EIEEF+ THP V + GVPD + GEE+ +KL ++ A
Sbjct: 465 EIEEFLFTHPAVADVQVIGVPDSKFGEEIVAWVKLHPGHQVEA 507
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
R + D V+ ++GY ++VGR KDMIIRGGEN+YP+EIEEF+ THP V + GVP
Sbjct: 426 GARWMHTGDLAVMDDEGYIKIVGRNKDMIIRGGENVYPREIEEFLFTHPAVADVQVIGVP 485
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
D + GEE+ +KL ++ A+ +R FCKG+++ F
Sbjct: 486 DSKFGEEIVAWVKLHPGHQVEAEVLREFCKGRIAHF 521
>gi|421477536|ref|ZP_15925356.1| AMP-binding enzyme [Burkholderia multivorans CF2]
gi|400226391|gb|EJO56469.1| AMP-binding enzyme [Burkholderia multivorans CF2]
Length = 575
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD + IVP G GEL +G+ MLGYW+D+ KT+E + D W+ TG
Sbjct: 396 LEVKIVDPSGEIVPVGVTGELCTKGYSVMLGYWDDDAKTREVL-IDGWMHTG-------- 446
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L +GY +VGR+KDM+IRGGEN+YP+
Sbjct: 447 -----------------------------DLATLDAEGYCNIVGRLKDMVIRGGENVYPR 477
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + A +GVPD + GEE+ I L+ + ++
Sbjct: 478 EIEEFLFRHPKIQSAQVFGVPDPKYGEELCAWIVLRADEQMT 519
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L +GY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + A +GVPD + GEE+
Sbjct: 447 DLATLDAEGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDPKYGEEL 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + ++ DD+R FC+G+++ +
Sbjct: 507 CAWIVLRADEQMTEDDVRAFCQGQIAHY 534
>gi|375140128|ref|YP_005000777.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359820749|gb|AEV73562.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 543
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 91/177 (51%), Gaps = 40/177 (22%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + + S++ + + K+VD + VP G GEL RG+ MLGYWE T E I
Sbjct: 348 DPIERRVSSVGTVHPHLEVKIVDPETGVTVPRGAAGELCTRGYSVMLGYWERPDWTAEAI 407
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
RW+ TG D V+ ++GY ++
Sbjct: 408 DAARWMHTG-------------------------------------DLAVMDDEGYVSII 430
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
GR KDM+IRGGENIYP+EIEEF+ THP++L+A GVPD R GEE+ +++KE +
Sbjct: 431 GRSKDMVIRGGENIYPREIEEFLYTHPHILDAQVIGVPDPRYGEELMAWVRMKEGTE 487
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ ++GY ++GR KDM+IRGGENIYP+EIEEF+ THP++L+A GVP
Sbjct: 409 AARWMHTGDLAVMDDEGYVSIIGRSKDMVIRGGENIYPREIEEFLYTHPHILDAQVIGVP 468
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
D R GEE+ +++KE + L+ + +R FC GK++ +
Sbjct: 469 DPRYGEELMAWVRMKEGTEPLSTEALRAFCTGKLAHY 505
>gi|302555107|ref|ZP_07307449.1| dicarboxylate-CoA ligase PimA [Streptomyces viridochromogenes DSM
40736]
gi|302472725|gb|EFL35818.1| dicarboxylate-CoA ligase PimA [Streptomyces viridochromogenes DSM
40736]
Length = 529
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 81/160 (50%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRIV-PFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + P GT GEL RG+ MLGYW++ +KT E + RW+ TG
Sbjct: 354 IEVKVVDPATGVTQPRGTAGELCTRGYSVMLGYWDEPEKTAEAVDAGRWMHTG------- 406
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D +REDGY ++VGRIKDMIIRGGENIYP
Sbjct: 407 ------------------------------DLATMREDGYVEIVGRIKDMIIRGGENIYP 436
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ HP + + GVP E GEEV + ++ A
Sbjct: 437 REIEEFLYAHPGIQDVQIVGVPHEHYGEEVLACVIARDPA 476
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E AGR + D +REDGY ++VGRIKDMIIRGGENIYP+EIEEF+
Sbjct: 386 YWDEPEKTAEAVDAGRWMHTGDLATMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYA 445
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
HP + + GVP E GEEV + ++ A + +R FC+G+++ +
Sbjct: 446 HPGIQDVQIVGVPHEHYGEEVLACVIARDPADPPTLEGLRAFCEGRLAHY 495
>gi|427792863|gb|JAA61883.1| Putative acyl-coa synthetase family member 2, partial
[Rhipicephalus pulchellus]
Length = 625
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 95/184 (51%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P D Q +T+ + K+VD N ++P GTPGE+ RG LGY+ DE+KTKE +
Sbjct: 432 DPDDKQLNTVGRPLPGLEVKIVDPNTGAVLPVGTPGEVWGRGPNVFLGYYNDEEKTKEAM 491
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
PD + +TG D V+ ++G+ +V
Sbjct: 492 TPDGFYKTG-------------------------------------DVGVMDDEGFVTIV 514
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
R+KD++ RGGE +YP E+EE THP+V E + GVPDER+GEEV I LK +AK+
Sbjct: 515 SRLKDVVNRGGEKVYPTEVEELFNTHPSVQECHIIGVPDERLGEEVCAWIVLKPDAKVTD 574
Query: 182 YEDK 185
E K
Sbjct: 575 RELK 578
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ ++G+ +V R+KD++ RGGE +YP E+EE THP+V E + GVPDER+GEEV
Sbjct: 501 DVGVMDDEGFVTIVSRLKDVVNRGGEKVYPTEVEELFNTHPSVQECHIIGVPDERLGEEV 560
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I LK +AK+ +++ CKGK+S F
Sbjct: 561 CAWIVLKPDAKVTDRELKEHCKGKLSHF 588
>gi|402564913|ref|YP_006614258.1| AMP-binding domain-containing [Burkholderia cepacia GG4]
gi|402246110|gb|AFQ46564.1| AMP-binding domain-containing [Burkholderia cepacia GG4]
Length = 575
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD N +V G GEL +G+ MLGYW+D+ KT+E + D W+ TG
Sbjct: 396 LEVKIVDPNGDVVQVGATGELCTKGYSVMLGYWDDDAKTREVL-VDGWMHTG-------- 446
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L DGY +VGR+KDM+IRGGEN+YP+
Sbjct: 447 -----------------------------DLATLDADGYCNIVGRLKDMVIRGGENVYPR 477
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + A +GVPD + GEE+ I L+ + +++
Sbjct: 478 EIEEFLFRHPKIQSAQVFGVPDAKYGEELCAWIVLRADEQMS 519
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L DGY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + A +GVPD + GEE+
Sbjct: 447 DLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDAKYGEEL 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + +++ DD+R FC G+++ +
Sbjct: 507 CAWIVLRADEQMSEDDVRAFCNGQIAHY 534
>gi|421470089|ref|ZP_15918496.1| AMP-binding enzyme [Burkholderia multivorans ATCC BAA-247]
gi|400228507|gb|EJO58436.1| AMP-binding enzyme [Burkholderia multivorans ATCC BAA-247]
Length = 575
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 84/161 (52%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD + IVP G GEL +G+ MLGYW+D+ KT+E + D W+ TG
Sbjct: 396 LEVKIVDPSGEIVPVGVTGELCTKGYSVMLGYWDDDAKTREVL-IDGWMHTG-------- 446
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L +GY +VGR+KDM+IRGGEN+YP+
Sbjct: 447 -----------------------------DLATLDAEGYCNIVGRLKDMVIRGGENVYPR 477
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKL 179
EIEEF+ HP + A +GVPD + GEE+ I L+ + ++
Sbjct: 478 EIEEFLFRHPKIQSAQVFGVPDPKYGEELCAWIVLRADEQM 518
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L +GY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + A +GVPD + GEE+
Sbjct: 447 DLATLDAEGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDPKYGEEL 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + ++ DD+R FC+G+++ +
Sbjct: 507 CAWIVLRADEQMAEDDVRAFCQGQIAHY 534
>gi|395536747|ref|XP_003770373.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Sarcophilus harrisii]
Length = 543
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 82/158 (51%), Gaps = 42/158 (26%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A+++D + V PGEL IRG+C MLGYW+D +KTK+ I D+W
Sbjct: 371 EAQILDPQTGKQVEINMPGELCIRGYCVMLGYWDDPEKTKDAIDEDKW------------ 418
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E+G+ ++VGR KDMIIRGGENIYP
Sbjct: 419 -----------------------------DIAAVDEEGFCKIVGRSKDMIIRGGENIYPA 449
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
E+E+F P+V EA GV DERMGEE+ I+LK N
Sbjct: 450 ELEDFFHKLPHVQEAQVVGVKDERMGEEICACIRLKAN 487
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+G+ ++VGR KDMIIRGGENIYP E+E+F P+V EA GV DERMGEE+
Sbjct: 419 DIAAVDEEGFCKIVGRSKDMIIRGGENIYPAELEDFFHKLPHVQEAQVVGVKDERMGEEI 478
Query: 458 GISIKLKEN--AKLNADDIRTFCKGKVSKF 485
I+LK N ++ ++++ CKGK+S F
Sbjct: 479 CACIRLKANYEGQITPEELKAHCKGKLSHF 508
>gi|375134371|ref|YP_004995021.1| acyl-CoA synthetase [Acinetobacter calcoaceticus PHEA-2]
gi|325121816|gb|ADY81339.1| acyl-CoA synthetase [Acinetobacter calcoaceticus PHEA-2]
Length = 564
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KTKE I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTKEVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +DG+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQDGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD R GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDARYGEELCACIILHEHHQID 508
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ DG+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTKEVIDAAGWMHTGDIAEMDQ-----DGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD R GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDARYGEELCACIILHEHHQIDEDSIRQFCKEHIS 521
>gi|319782251|ref|YP_004141727.1| AMP-dependent synthetase and ligase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168139|gb|ADV11677.1| AMP-dependent synthetase and ligase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 590
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 85/172 (49%), Gaps = 39/172 (22%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + ST+ + K VD + V G PGEL RG+ M GYW+D+ KT+E I
Sbjct: 394 DPLEKRVSTVGRIHPHVEVKAVDADGATVAVGVPGELCTRGYSVMKGYWDDDDKTREAID 453
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + +GY +VG
Sbjct: 454 ADGWMHTG-------------------------------------DLATIDAEGYCNIVG 476
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
R+KDM+IRGGEN+YP+E+EEF+ HP V E +G+PD + GEE+ I LK
Sbjct: 477 RVKDMVIRGGENVYPREVEEFLYRHPKVKEVQVFGIPDAKYGEELCAWIVLK 528
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGR+KDM+IRGGEN+YP+E+EEF+ HP V E +G+PD + GEE+
Sbjct: 462 DLATIDAEGYCNIVGRVKDMVIRGGENVYPREVEEFLYRHPKVKEVQVFGIPDAKYGEEL 521
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I LK ++R FC G+++ +
Sbjct: 522 CAWIVLKPGQIATEQEVRNFCAGQIAHY 549
>gi|6942168|gb|AAF32337.1|AF218939_5 long chain fatty acid acyl-CoA ligase [Bacillus subtilis]
Length = 523
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 90/175 (51%), Gaps = 43/175 (24%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY++DE+ T++ I P+ WL TG
Sbjct: 386 GVQGELCTRGYHVMKGYYKDEEATQKAINPEGWLFTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY +V GR+KDM+IRGGEN+YP+EIEEF+ HPN+L+
Sbjct: 423 --------------DLAVMDEDGYCRVTGRLKDMLIRGGENVYPREIEEFLYRHPNILDV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENA-----KLNAYEDKSIS-SDYHEFETMYDSIM 202
GVPDE+ GEE IKLKE +L AY I+ + + ++ SI+
Sbjct: 469 QVVGVPDEKYGEEAAAWIKLKEGKTASPEELKAYCKGKIADTKFRAISSLQTSIL 523
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Query: 370 RIYHYKK-YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 428
R YH K Y ++EE + +F D V+ EDGY +V GR+KDM+IRGGEN+YP+
Sbjct: 394 RGYHVMKGYYKDEEATQKAINPEGWLFTGDLAVMDEDGYCRVTGRLKDMLIRGGENVYPR 453
Query: 429 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
EIEEF+ HPN+L+ GVPDE+ GEE IKLKE + ++++ +CKGK++
Sbjct: 454 EIEEFLYRHPNILDVQVVGVPDEKYGEEAAAWIKLKEGKTASPEELKAYCKGKIA 508
>gi|13475770|ref|NP_107337.1| AMP-binding protein [Mesorhizobium loti MAFF303099]
gi|14026526|dbj|BAB53123.1| long chain fatty acid acyl-CoA ligase [Mesorhizobium loti
MAFF303099]
Length = 590
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 89/187 (47%), Gaps = 39/187 (20%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + ST+ + K +D + V G PGEL RG+ M GYW+D +KT+E I
Sbjct: 394 DPLEKRVSTVGRIHPHVEVKAIDADGATVAVGAPGELCTRGYSVMKGYWDDAEKTREAID 453
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + +GY +VG
Sbjct: 454 SDGWMHTG-------------------------------------DLATIDAEGYCNIVG 476
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGEN+YP+E+EEF+ HP V E +G+PD + GEE+ I LK
Sbjct: 477 RVKDMVIRGGENVYPREVEEFLYRHPKVREVQVFGIPDAKYGEELCAWIVLKPGQIATEQ 536
Query: 183 EDKSISS 189
E K+ +
Sbjct: 537 EIKTFCA 543
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGR+KDM+IRGGEN+YP+E+EEF+ HP V E +G+PD + GEE+
Sbjct: 462 DLATIDAEGYCNIVGRVKDMVIRGGENVYPREVEEFLYRHPKVREVQVFGIPDAKYGEEL 521
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I LK +I+TFC G+++ +
Sbjct: 522 CAWIVLKPGQIATEQEIKTFCAGQIAHY 549
>gi|359420410|ref|ZP_09212348.1| putative fatty-acid--CoA ligase [Gordonia araii NBRC 100433]
gi|358243767|dbj|GAB10417.1| putative fatty-acid--CoA ligase [Gordonia araii NBRC 100433]
Length = 547
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 87/177 (49%), Gaps = 44/177 (24%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD VP G GE RG+ M GYW +KT E + W+ TG
Sbjct: 370 LEIKVVDPATGDTVPRGVAGEFCTRGYSVMKGYWNQPEKTAEVLDEQGWMHTG------- 422
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ E+GY Q+ GRIKDM+IRGGENIYP
Sbjct: 423 ------------------------------DIAVMGENGYVQITGRIKDMVIRGGENIYP 452
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK------LNAYEDKSIS 188
+EIEEF+ THP++L+A GVPDER GEE+ ++L++ L A+ D I+
Sbjct: 453 REIEEFLYTHPDILDAQVIGVPDERYGEELMAWVRLRDGVADFTVEDLRAFADGKIA 509
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY Q+ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDER GEE+
Sbjct: 423 DIAVMGENGYVQITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDERYGEEL 482
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSK 484
++L++ A +D+R F GK+++
Sbjct: 483 MAWVRLRDGVADFTVEDLRAFADGKIAR 510
>gi|221214286|ref|ZP_03587258.1| AMP-binding domain protein [Burkholderia multivorans CGD1]
gi|221165941|gb|EED98415.1| AMP-binding domain protein [Burkholderia multivorans CGD1]
Length = 575
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 83/162 (51%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD IVP G GEL +G+ MLGYW+D+ KT+E + D W+ TG
Sbjct: 396 LEVKIVDPGGEIVPVGVTGELCTKGYSVMLGYWDDDAKTREVL-IDGWMHTG-------- 446
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L +GY +VGR+KDM+IRGGEN+YP+
Sbjct: 447 -----------------------------DLATLDAEGYCNIVGRLKDMVIRGGENVYPR 477
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + A +GVPD + GEE+ I L+ + ++
Sbjct: 478 EIEEFLFRHPKIQSAQVFGVPDPKYGEELCAWIVLRADEQMT 519
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L +GY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + A +GVPD + GEE+
Sbjct: 447 DLATLDAEGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDPKYGEEL 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + ++ DD+R FC+G+++ +
Sbjct: 507 CAWIVLRADEQMTEDDVRAFCQGQIAHY 534
>gi|104782428|ref|YP_608926.1| AMP-binding domain-containing protein [Pseudomonas entomophila L48]
gi|95111415|emb|CAK16135.1| putative long-chain-fatty-acid-CoA ligase [Pseudomonas entomophila
L48]
Length = 557
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 89/178 (50%), Gaps = 39/178 (21%)
Query: 8 DLQFSTLSSS--SFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + + K+VD + RIV G GEL RG+ MLGYW++ Q T + + P
Sbjct: 369 ELRVTTVGRTHPQLETKLVDVDGRIVARGEIGELCTRGYSVMLGYWDNLQATHDALDPAG 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D V+ +DGY ++VGR K
Sbjct: 429 WMHTG-------------------------------------DLAVMDDDGYVRIVGRNK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
DMIIRGGENIYP+E+EEF THP V EA G+P + GEEV I+L A E
Sbjct: 452 DMIIRGGENIYPRELEEFFHTHPAVAEAQVVGIPCSKYGEEVVAWIRLHPGHSATAEE 509
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +DGY ++VGR KDMIIRGGENIYP+E+EEF THP V EA G+P + GEEV
Sbjct: 434 DLAVMDDDGYVRIVGRNKDMIIRGGENIYPRELEEFFHTHPAVAEAQVVGIPCSKYGEEV 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+L A++++ +CK +++ F
Sbjct: 494 VAWIRLHPGHSATAEELQQWCKARLAHF 521
>gi|440797765|gb|ELR18841.1| acylCoA synthetase [Acanthamoeba castellanii str. Neff]
Length = 863
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 104/233 (44%), Gaps = 50/233 (21%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD R VP G GEL +G+ M GYW + +KT+E+I W+ TG
Sbjct: 654 ECKIVDTEGRTVPVGHVGELCTKGYLVMKGYWNNPKKTEESIDAGGWMHTG--------- 704
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V EDG+ ++VGR KD+IIRGGEN+YP+E
Sbjct: 705 ----------------------------DLAVFDEDGFCKIVGRSKDVIIRGGENVYPRE 736
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDYHEF---ET 196
IEEF+ THP + + GVP+ + GE+V IK K+N K A + D H F +
Sbjct: 737 IEEFLYTHPAIEDVQVIGVPNRKYGEKVCAWIKKKDNTKARAV----TAEDIHAFCKDKI 792
Query: 197 MYDSIMAHPNRTTPYYQW------WSYDPNQSYVTHDNGFPVDYNRALYSLKM 243
+ + H + T +W +Y YV FP+ KM
Sbjct: 793 AHYKVGEHLSLATCAVKWSAPGRLLTYTQIPEYVVFKEEFPMTVTGKYMKHKM 845
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 7/110 (6%)
Query: 379 REEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHP 438
+ EE+I AG + D V EDG+ ++VGR KD+IIRGGEN+YP+EIEEF+ THP
Sbjct: 690 KTEESI----DAGGWMHTGDLAVFDEDGFCKIVGRSKDVIIRGGENVYPREIEEFLYTHP 745
Query: 439 NVLEAYAYGVPDERMGEEVGISIKLKENAK---LNADDIRTFCKGKVSKF 485
+ + GVP+ + GE+V IK K+N K + A+DI FCK K++ +
Sbjct: 746 AIEDVQVIGVPNRKYGEKVCAWIKKKDNTKARAVTAEDIHAFCKDKIAHY 795
>gi|374365200|ref|ZP_09623293.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
gi|373103335|gb|EHP44363.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
Length = 573
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 86/172 (50%), Gaps = 40/172 (23%)
Query: 5 NPTDLQFST--LSSSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T L + K+VD IVP G GEL RG+ M GYW+DE +T+E I
Sbjct: 379 DPLDKRVTTVGLIQPHLEVKLVDGTGEIVPVGEKGELCTRGYSVMQGYWDDEPRTREAIR 438
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + E+GY +VG
Sbjct: 439 -DGWMHTG-------------------------------------DLATIDEEGYCNIVG 460
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
R+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV I LK
Sbjct: 461 RVKDMLIRGGENVYPREIEEFLFRHPKVQAVQVFGVPDPKYGEEVCAWIVLK 512
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY +VGR+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD + GEEV
Sbjct: 446 DLATIDEEGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVQVFGVPDPKYGEEV 505
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I LK DDIR FC+ +++ +
Sbjct: 506 CAWIVLKPGETATEDDIRAFCRDQIAHY 533
>gi|95930665|ref|ZP_01313399.1| AMP-dependent synthetase and ligase [Desulfuromonas acetoxidans DSM
684]
gi|95133317|gb|EAT14982.1| AMP-dependent synthetase and ligase [Desulfuromonas acetoxidans DSM
684]
Length = 554
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 94/188 (50%), Gaps = 40/188 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ ST+ + + K+VD +P G GEL RG+ M GY++ + T I
Sbjct: 354 DPIELRVSTVGRALPDVEVKIVDIETGEALPAGKQGELCTRGYLVMKGYYKMPEATALAI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D V+ E+GY ++
Sbjct: 414 DEDNWLHTG-------------------------------------DLAVMDENGYCKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIK+MIIRGGENIYP+EIEEF+ THP V + YGVPD + GE+V +IK+K+ L
Sbjct: 437 GRIKNMIIRGGENIYPREIEEFLYTHPAVSDVQVYGVPDRKYGEQVMAAIKIKDGVSLTE 496
Query: 182 YEDKSISS 189
E K+ +
Sbjct: 497 DEVKTFCT 504
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 66/88 (75%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY ++ GRIK+MIIRGGENIYP+EIEEF+ THP V + YGVPD + GE+V
Sbjct: 423 DLAVMDENGYCKITGRIKNMIIRGGENIYPREIEEFLYTHPAVSDVQVYGVPDRKYGEQV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+IK+K+ L D+++TFC G+++ +
Sbjct: 483 MAAIKIKDGVSLTEDEVKTFCTGRIANY 510
>gi|395826678|ref|XP_003786543.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 2 [Otolemur garnettii]
Length = 572
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 79/156 (50%), Gaps = 37/156 (23%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
PGEL IRG+C MLGYW + +KT+E +G D+W RTG
Sbjct: 412 LNAPGELCIRGYCVMLGYWGEREKTEEVVGQDKWYRTG---------------------- 449
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E
Sbjct: 450 ---------------DIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQE 494
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
GV D RMGEE+ I+LK K A E K+
Sbjct: 495 VQVVGVKDNRMGEEICACIRLKNGEKTTAEEIKAFC 530
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D RMGEE+
Sbjct: 450 DIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDNRMGEEI 509
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK K A++I+ FCKGK+S F
Sbjct: 510 CACIRLKNGEKTTAEEIKAFCKGKISHF 537
>gi|187925861|ref|YP_001897503.1| AMP-binding domain-containing protein [Burkholderia phytofirmans
PsJN]
gi|187717055|gb|ACD18279.1| AMP-dependent synthetase and ligase [Burkholderia phytofirmans
PsJN]
Length = 576
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 89/181 (49%), Gaps = 40/181 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + K+VD IVP G GEL RG+ M GYW DE KT+E+I
Sbjct: 381 DPLDKRTTTVGRIQPHLEVKIVDPLGAIVPVGETGELCTRGYSVMQGYWGDEAKTRESI- 439
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D L +GY +VG
Sbjct: 440 VDGWMHTG-------------------------------------DLATLDAEGYCNIVG 462
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGENIYP+EIEEF+ HP + +GVPD + GEEV + L+ ++ A
Sbjct: 463 RLKDMLIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDTKYGEEVCAWVVLRSGEQVTAE 522
Query: 183 E 183
E
Sbjct: 523 E 523
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L +GY +VGR+KDM+IRGGENIYP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATLDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDTKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ L+ ++ A++I+ FC G+++ +
Sbjct: 508 CAWVVLRSGEQVTAEEIQQFCHGQIAHY 535
>gi|410626717|ref|ZP_11337470.1| fatty-acyl-CoA synthase [Glaciecola mesophila KMM 241]
gi|410153818|dbj|GAC24239.1| fatty-acyl-CoA synthase [Glaciecola mesophila KMM 241]
Length = 566
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 81/167 (48%), Gaps = 37/167 (22%)
Query: 17 SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTS 76
S + K+VD NR++P G GE+ RG+ M GYW D +T ETI WL +G
Sbjct: 381 SRIEVKLVDEYNRVIPIGERGEVCTRGYSVMRGYWNDPIRTAETIDAGGWLHSG------ 434
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
D ++ EDGY +VGR KDMIIRGGENIY
Sbjct: 435 -------------------------------DIGIMDEDGYVTIVGRSKDMIIRGGENIY 463
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
PKEIEEF+ THP V + +G+ GEEV I LK + A E
Sbjct: 464 PKEIEEFLYTHPAVQDIQVFGIAHTDFGEEVCAWICLKPGSSACATE 510
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 378 LREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTH 437
+R E I AG + D ++ EDGY +VGR KDMIIRGGENIYPKEIEEF+ TH
Sbjct: 419 IRTAETI----DAGGWLHSGDIGIMDEDGYVTIVGRSKDMIIRGGENIYPKEIEEFLYTH 474
Query: 438 PNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
P V + +G+ GEEV I LK + A +I FCK +++ F
Sbjct: 475 PAVQDIQVFGIAHTDFGEEVCAWICLKPGSSACATEITDFCKNQIAHF 522
>gi|296270056|ref|YP_003652688.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
gi|296092843|gb|ADG88795.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
Length = 544
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 82/161 (50%), Gaps = 38/161 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD R VP G GEL RG+ MLGYWE + T E I RW+ TG
Sbjct: 359 IEVKIVDPETGRTVPRGQVGELCTRGYSVMLGYWEQPEATAEAIDRARWMHTG------- 411
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + E+GY +VGRIKDM+IRGGENIYP
Sbjct: 412 ------------------------------DLATMDEEGYVNIVGRIKDMVIRGGENIYP 441
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++ + GVPDE+ GEE+ I ++ A+
Sbjct: 442 REIEEFLYTHPDIADVQVIGVPDEKYGEELMAWIIMRPGAE 482
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D + E+GY +VGRIKDM+IRGGENIYP+EIEEF+ THP++ + GVPD
Sbjct: 405 ARWMHTGDLATMDEEGYVNIVGRIKDMVIRGGENIYPREIEEFLYTHPDIADVQVIGVPD 464
Query: 451 ERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
E+ GEE+ I ++ A+ L A+ +R FC G+++ +
Sbjct: 465 EKYGEELMAWIIMRPGAEPLTAERLREFCAGRLAHY 500
>gi|149179825|ref|ZP_01858330.1| acyl-CoA synthase [Bacillus sp. SG-1]
gi|148852017|gb|EDL66162.1| acyl-CoA synthase [Bacillus sp. SG-1]
Length = 547
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 93/182 (51%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + + + KVV + VPFG GEL RG+ M GY+++E+ T I
Sbjct: 355 DPIELRVETVGRALPNVEVKVVQPGTDEEVPFGVQGELCTRGYLVMKGYYKNEEATAAAI 414
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D V+ E+GY ++
Sbjct: 415 DSDGWLHTG-------------------------------------DLAVMDENGYCRIT 437
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ THP VL+ G+PD+ GEEV + LKE +A
Sbjct: 438 GRLKDMIIRGGENIYPREIEEFLYTHPKVLDVQVVGIPDKVYGEEVMAWVILKEGQTASA 497
Query: 182 YE 183
E
Sbjct: 498 DE 499
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y EE DS G + D V+ E+GY ++ GR+KDMIIRGGENIYP+EIEEF+ T
Sbjct: 404 YKNEEATAAAIDSDGW-LHTGDLAVMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYT 462
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
HP VL+ G+PD+ GEEV + LKE +AD++R +CKGK+S+
Sbjct: 463 HPKVLDVQVVGIPDKVYGEEVMAWVILKEGQTASADELREYCKGKISR 510
>gi|395826680|ref|XP_003786544.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 3 [Otolemur garnettii]
Length = 602
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 79/156 (50%), Gaps = 37/156 (23%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
PGEL IRG+C MLGYW + +KT+E +G D+W RTG
Sbjct: 442 LNAPGELCIRGYCVMLGYWGEREKTEEVVGQDKWYRTG---------------------- 479
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E
Sbjct: 480 ---------------DIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQE 524
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
GV D RMGEE+ I+LK K A E K+
Sbjct: 525 VQVVGVKDNRMGEEICACIRLKNGEKTTAEEIKAFC 560
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D RMGEE+
Sbjct: 480 DIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDNRMGEEI 539
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK K A++I+ FCKGK+S F
Sbjct: 540 CACIRLKNGEKTTAEEIKAFCKGKISHF 567
>gi|91785731|ref|YP_560937.1| AMP-binding protein [Burkholderia xenovorans LB400]
gi|91689685|gb|ABE32885.1| putative long-chain-fatty-acid--CoA ligase [Burkholderia xenovorans
LB400]
Length = 576
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 89/181 (49%), Gaps = 40/181 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + K+VD IVP G GEL RG+ M GYW+DE KT+E+I
Sbjct: 381 DPLDKRTTTVGRIQPHLEVKIVDPLGNIVPVGETGELCTRGYSVMQGYWDDEAKTRESI- 439
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D L +GY +VG
Sbjct: 440 VDGWMHTG-------------------------------------DLATLDAEGYCNIVG 462
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGENIYP+EIEEF+ HP + +GVPD + GEEV + L+ + A
Sbjct: 463 RLKDMLIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWVVLRAGEQATAE 522
Query: 183 E 183
E
Sbjct: 523 E 523
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L +GY +VGR+KDM+IRGGENIYP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATLDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ L+ + A++I+ FC+G+++ +
Sbjct: 508 CAWVVLRAGEQATAEEIQQFCQGQIAHY 535
>gi|254389444|ref|ZP_05004671.1| acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294815818|ref|ZP_06774461.1| Acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|326444162|ref|ZP_08218896.1| AMP-binding domain protein [Streptomyces clavuligerus ATCC 27064]
gi|197703158|gb|EDY48970.1| acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294328417|gb|EFG10060.1| Acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064]
Length = 563
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 79/150 (52%), Gaps = 38/150 (25%)
Query: 19 FQAKVVDHN-NRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KV+D + ++P G GEL RG+ M+GYW + +++ E + RW+ TG
Sbjct: 385 VEVKVIDPDTGTVLPRGRAGELCTRGYGVMIGYWGEPERSAEAVDTGRWMHTG------- 437
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R DGY Q+VGRIKDMIIRGGENIYP
Sbjct: 438 ------------------------------DLAVMRPDGYVQIVGRIKDMIIRGGENIYP 467
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
+EIEEF+ HP + + GVPDER GEE+
Sbjct: 468 REIEEFLHAHPKISDVQVVGVPDERYGEEI 497
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
GR + D V+R DGY Q+VGRIKDMIIRGGENIYP+EIEEF+ HP + + GVPD
Sbjct: 431 GRWMHTGDLAVMRPDGYVQIVGRIKDMIIRGGENIYPREIEEFLHAHPKISDVQVVGVPD 490
Query: 451 ERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
ER GEE+ + ++ A D++ FC+ +++ F
Sbjct: 491 ERYGEEILACVIPRDPADPPTQDEVTAFCRDRLAHF 526
>gi|395826676|ref|XP_003786542.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 1 [Otolemur garnettii]
Length = 615
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 79/156 (50%), Gaps = 37/156 (23%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
PGEL IRG+C MLGYW + +KT+E +G D+W RTG
Sbjct: 455 LNAPGELCIRGYCVMLGYWGEREKTEEVVGQDKWYRTG---------------------- 492
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E
Sbjct: 493 ---------------DIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQE 537
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
GV D RMGEE+ I+LK K A E K+
Sbjct: 538 VQVVGVKDNRMGEEICACIRLKNGEKTTAEEIKAFC 573
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D RMGEE+
Sbjct: 493 DIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDNRMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK K A++I+ FCKGK+S F
Sbjct: 553 CACIRLKNGEKTTAEEIKAFCKGKISHF 580
>gi|336235213|ref|YP_004587829.1| long-chain-fatty-acid--CoA ligase [Geobacillus thermoglucosidasius
C56-YS93]
gi|335362068|gb|AEH47748.1| Long-chain-fatty-acid--CoA ligase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 544
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 92/182 (50%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P ++ T+ + + + K+VD N+ VP G GEL RG+ M GY+++ TKE I
Sbjct: 351 DPIHIRVETVGRALPNVEVKIVDPSTNKEVPPGVQGELCTRGYHVMKGYYKNPGATKEVI 410
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D V+ E+GY ++
Sbjct: 411 DEDGWLHTG-------------------------------------DLAVMDENGYCRIT 433
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ HP +L+ GVPDE+ GEEV I LKE A
Sbjct: 434 GRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVGVPDEKYGEEVMAWIILKEGQTATA 493
Query: 182 YE 183
E
Sbjct: 494 EE 495
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 64/87 (73%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY ++ GR+KDMIIRGGENIYP+EIEEF+ HP +L+ GVPDE+ GEEV
Sbjct: 420 DLAVMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVGVPDEKYGEEV 479
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
I LKE A++IR FC+GK+S+
Sbjct: 480 MAWIILKEGQTATAEEIREFCRGKISR 506
>gi|115378012|ref|ZP_01465193.1| long chain fatty acid-CoA ligase [Stigmatella aurantiaca DW4/3-1]
gi|310819621|ref|YP_003951979.1| long chain fatty acid-CoA ligase [Stigmatella aurantiaca DW4/3-1]
gi|115364989|gb|EAU64043.1| long chain fatty acid-CoA ligase [Stigmatella aurantiaca DW4/3-1]
gi|309392693|gb|ADO70152.1| Long chain fatty acid-CoA ligase [Stigmatella aurantiaca DW4/3-1]
Length = 547
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 89/182 (48%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIV-PFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P D + ST+ + K++D V P G PGEL RG+ MLGYW + + T+ I
Sbjct: 347 DPLDRRVSTVGRVHPHLEIKIIDAETGAVQPRGAPGELCTRGYSVMLGYWNNPEATQGAI 406
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
P W+ TG D + +GY ++V
Sbjct: 407 DPAGWMHTG-------------------------------------DLATMDAEGYVKIV 429
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIKD+IIRGGEN+YP+E+EE++ THP V EA GVP E+ GEEV +++K L
Sbjct: 430 GRIKDLIIRGGENVYPREVEEYLHTHPGVSEAQVIGVPSEKYGEEVMAWVRVKPGVTLTE 489
Query: 182 YE 183
E
Sbjct: 490 SE 491
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY ++VGRIKD+IIRGGEN+YP+E+EE++ THP V EA GVP E+ GEEV
Sbjct: 416 DLATMDAEGYVKIVGRIKDLIIRGGENVYPREVEEYLHTHPGVSEAQVIGVPSEKYGEEV 475
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+++K L ++ FC G++S F
Sbjct: 476 MAWVRVKPGVTLTESELVAFCTGRISTF 503
>gi|109896485|ref|YP_659740.1| AMP-dependent synthetase and ligase [Pseudoalteromonas atlantica
T6c]
gi|109698766|gb|ABG38686.1| AMP-dependent synthetase and ligase [Pseudoalteromonas atlantica
T6c]
Length = 566
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 81/167 (48%), Gaps = 37/167 (22%)
Query: 17 SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTS 76
S + K+VD NR++P G GE+ RG+ M GYW D +T ETI WL +G
Sbjct: 381 SRIEVKLVDEYNRVIPIGERGEVCTRGYSVMRGYWNDPIRTAETIDAGGWLHSG------ 434
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
D ++ EDGY +VGR KDMIIRGGENIY
Sbjct: 435 -------------------------------DIGIMDEDGYVTIVGRSKDMIIRGGENIY 463
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
PKEIEEF+ THP V + +G+ GEEV I LK + A E
Sbjct: 464 PKEIEEFLYTHPAVQDIQVFGIAHTDFGEEVCAWICLKPGSSACATE 510
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 378 LREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTH 437
+R E I AG + D ++ EDGY +VGR KDMIIRGGENIYPKEIEEF+ TH
Sbjct: 419 IRTAETI----DAGGWLHSGDIGIMDEDGYVTIVGRSKDMIIRGGENIYPKEIEEFLYTH 474
Query: 438 PNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
P V + +G+ GEEV I LK + A +I FCK +++ F
Sbjct: 475 PAVQDIQVFGIAHTDFGEEVCAWICLKPGSSACATEITDFCKNQIAHF 522
>gi|419954341|ref|ZP_14470480.1| AMP-binding domain protein [Pseudomonas stutzeri TS44]
gi|387968892|gb|EIK53178.1| AMP-binding domain protein [Pseudomonas stutzeri TS44]
Length = 560
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 37/163 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++K+VD + +VP G GEL RG+ MLGYW + T+E I RW+ TG
Sbjct: 382 LESKIVDEHGAVVPRGQIGELCTRGYSVMLGYWNNPDATREAIDGARWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ ++GY ++VGR KDMIIRGGEN+YP+
Sbjct: 434 -----------------------------DLAVMDDEGYVKIVGRNKDMIIRGGENVYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
E+EEF+ THP V + GVPD + GEE+ +KL ++ A
Sbjct: 465 EVEEFLFTHPAVADVQVIGVPDSKFGEEIVAWVKLHPGHQVEA 507
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 65/96 (67%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
R + D V+ ++GY ++VGR KDMIIRGGEN+YP+E+EEF+ THP V + GVP
Sbjct: 426 GARWMHTGDLAVMDDEGYVKIVGRNKDMIIRGGENVYPREVEEFLFTHPAVADVQVIGVP 485
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
D + GEE+ +KL ++ A+ +R FCKG+++ F
Sbjct: 486 DSKFGEEIVAWVKLHPGHQVEAEALREFCKGRIAHF 521
>gi|312110768|ref|YP_003989084.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y4.1MC1]
gi|311215869|gb|ADP74473.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y4.1MC1]
Length = 544
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 92/182 (50%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P ++ T+ + + + K+VD N+ VP G GEL RG+ M GY+++ TKE I
Sbjct: 351 DPIHIRVETVGRALPNVEVKIVDPSTNKEVPPGVQGELCTRGYHVMKGYYKNPGATKEVI 410
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D V+ E+GY ++
Sbjct: 411 DEDGWLHTG-------------------------------------DLAVMDENGYCRIT 433
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ HP +L+ GVPDE+ GEEV I LKE A
Sbjct: 434 GRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVGVPDEKYGEEVMAWIILKEGQTATA 493
Query: 182 YE 183
E
Sbjct: 494 EE 495
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 64/87 (73%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY ++ GR+KDMIIRGGENIYP+EIEEF+ HP +L+ GVPDE+ GEEV
Sbjct: 420 DLAVMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVGVPDEKYGEEV 479
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
I LKE A++IR FC+GK+S+
Sbjct: 480 MAWIILKEGQTATAEEIREFCRGKISR 506
>gi|423719772|ref|ZP_17693954.1| acyl-CoA synthetase, AMP-binding [Geobacillus thermoglucosidans
TNO-09.020]
gi|383367260|gb|EID44540.1| acyl-CoA synthetase, AMP-binding [Geobacillus thermoglucosidans
TNO-09.020]
Length = 544
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 92/182 (50%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P ++ T+ + + + K+VD N+ VP G GEL RG+ M GY+++ TKE I
Sbjct: 351 DPIHIRVETVGRALPNVEVKIVDPSTNKEVPPGVQGELCTRGYHVMKGYYKNPGATKEVI 410
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D V+ E+GY ++
Sbjct: 411 DEDGWLHTG-------------------------------------DLAVMDENGYCRIT 433
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ HP +L+ GVPDE+ GEEV I LKE A
Sbjct: 434 GRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVGVPDEKYGEEVMAWIILKEGQTATA 493
Query: 182 YE 183
E
Sbjct: 494 EE 495
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 64/87 (73%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY ++ GR+KDMIIRGGENIYP+EIEEF+ HP +L+ GVPDE+ GEEV
Sbjct: 420 DLAVMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVGVPDEKYGEEV 479
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
I LKE A++IR FC+GK+S+
Sbjct: 480 MAWIILKEGQTATAEEIREFCRGKISR 506
>gi|377822092|ref|YP_004978463.1| AMP-dependent synthetase and ligase [Burkholderia sp. YI23]
gi|357936927|gb|AET90486.1| AMP-dependent synthetase and ligase [Burkholderia sp. YI23]
Length = 576
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 84/165 (50%), Gaps = 40/165 (24%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + K+VD +IVP G GEL RG+ M GYW+DE KT+E I
Sbjct: 381 DPLDKRTTTVGRIQPHLEVKIVDPLGKIVPVGETGELCTRGYSVMKGYWDDEAKTREAI- 439
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D L +GY +VG
Sbjct: 440 VDGWMHTG-------------------------------------DLATLDAEGYCNIVG 462
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
R+KDM+IRGGENIYP+EIEEF+ HP V +GVPD++ GEEV
Sbjct: 463 RLKDMLIRGGENIYPREIEEFLFRHPKVQSVQVFGVPDQKYGEEV 507
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L +GY +VGR+KDM+IRGGENIYP+EIEEF+ HP V +GVPD++ GEEV
Sbjct: 448 DLATLDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKVQSVQVFGVPDQKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I ++ + + ++IR FC+G+++ +
Sbjct: 508 CAWIVVRPGEQASEEEIREFCQGQIAHY 535
>gi|398310927|ref|ZP_10514401.1| AMP-binding domain protein [Bacillus mojavensis RO-H-1]
Length = 548
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 80/153 (52%), Gaps = 37/153 (24%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY++D+ T++ I PD WL TG
Sbjct: 386 GVQGELCTRGYHVMKGYYKDKDATQKAINPDGWLFTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY +V GR+KDM+IRGGENIYP+EIEEF+ HPN+L+
Sbjct: 423 --------------DLAVMDEDGYCRVTGRLKDMLIRGGENIYPREIEEFLYRHPNILDV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
GVPDE+ GEE IKLKE + E K+
Sbjct: 469 QVVGVPDEKYGEEAAAWIKLKEGKTASPEELKA 501
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 67/91 (73%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
+F D V+ EDGY +V GR+KDM+IRGGENIYP+EIEEF+ HPN+L+ GVPDE+
Sbjct: 419 LFTGDLAVMDEDGYCRVTGRLKDMLIRGGENIYPREIEEFLYRHPNILDVQVVGVPDEKY 478
Query: 454 GEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
GEE IKLKE + ++++ +CKGK+++
Sbjct: 479 GEEAAAWIKLKEGKTASPEELKAYCKGKIAR 509
>gi|417411937|gb|JAA52387.1| Putative acyl-coa synthetase family member 2 mitochondrial
precursor, partial [Desmodus rotundus]
Length = 613
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 78/156 (50%), Gaps = 37/156 (23%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
TPGEL IRG+C MLGYW D QKT+E IG D+W RTG
Sbjct: 453 LNTPGELCIRGYCVMLGYWNDPQKTEEVIGLDKWYRTG---------------------- 490
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
D + E G ++VGR +DMIIRGGENIYP E+E F+ THP V E
Sbjct: 491 ---------------DTATMDEQGLCKIVGRSRDMIIRGGENIYPVELENFLHTHPQVQE 535
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
GV D RMGEE+ I+LK + E K+
Sbjct: 536 VQVVGVKDNRMGEEICACIRLKNGEEATPEEIKAFC 571
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G ++VGR +DMIIRGGENIYP E+E F+ THP V E GV D RMGEE+
Sbjct: 491 DTATMDEQGLCKIVGRSRDMIIRGGENIYPVELENFLHTHPQVQEVQVVGVKDNRMGEEI 550
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK + ++I+ FCKGK+S F
Sbjct: 551 CACIRLKNGEEATPEEIKAFCKGKISHF 578
>gi|296140997|ref|YP_003648240.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
gi|296029131|gb|ADG79901.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
Length = 541
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 87/167 (52%), Gaps = 38/167 (22%)
Query: 19 FQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ +V+D + ++P G GEL RG+ M GYW +E+KT E I + W+ TG
Sbjct: 363 LEIRVIDPIDGTVMPRGEVGELCTRGYSVMKGYWNNEEKTAEAIDAEGWMHTG------- 415
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + + GY +V GRIKDM+IRGGENIYP
Sbjct: 416 ------------------------------DLATMDDAGYVRVTGRIKDMVIRGGENIYP 445
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
+EIEEF+ THP++L+A GVPDE+ GEE+ I+L+E ED
Sbjct: 446 REIEEFLYTHPDILDAQVIGVPDEKYGEELMAWIQLREGVDSFTVED 492
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Query: 375 KKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFI 434
K Y EE A + D + + GY +V GRIKDM+IRGGENIYP+EIEEF+
Sbjct: 393 KGYWNNEEKTAEAIDAEGWMHTGDLATMDDAGYVRVTGRIKDMVIRGGENIYPREIEEFL 452
Query: 435 QTHPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSK 484
THP++L+A GVPDE+ GEE+ I+L+E +D++ F +GK+++
Sbjct: 453 YTHPDILDAQVIGVPDEKYGEELMAWIQLREGVDSFTVEDLKAFAEGKIAR 503
>gi|127513521|ref|YP_001094718.1| AMP-binding protein [Shewanella loihica PV-4]
gi|126638816|gb|ABO24459.1| AMP-dependent synthetase and ligase [Shewanella loihica PV-4]
Length = 574
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 84/164 (51%), Gaps = 37/164 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
Q K+VD ++P G PGE+ RG+C M YW D +KT TI + WL +G
Sbjct: 396 QVKIVDEFGEVLPVGQPGEVCSRGYCVMQFYWNDAEKTAATIDSEGWLHSG--------- 446
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +GY ++VGRIKDMIIRGGENIYP+E
Sbjct: 447 ----------------------------DLGEMDSEGYVKIVGRIKDMIIRGGENIYPRE 478
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
IEE + THP+V +A +GV E+ GEEV IK++ A + E
Sbjct: 479 IEEKLYTHPDVQDAAIFGVKSEKYGEEVCAWIKVQPGASVTEEE 522
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 59/84 (70%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ +GY ++VGRIKDMIIRGGENIYP+EIEE + THP+V +A +GV E+ GEEV I
Sbjct: 451 MDSEGYVKIVGRIKDMIIRGGENIYPREIEEKLYTHPDVQDAAIFGVKSEKYGEEVCAWI 510
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
K++ A + ++IR F K + F
Sbjct: 511 KVQPGASVTEEEIRHFLTEKFAYF 534
>gi|432955914|ref|XP_004085626.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Oryzias latipes]
Length = 194
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 85/168 (50%), Gaps = 42/168 (25%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+AK+VD +++P G GE++IRG+C ML YW+++ KT E I RW +TG
Sbjct: 15 IEAKIVDPTTEQVLPLGMSGEIMIRGYCVMLEYWKEKGKTDECITGARWYKTG------- 67
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYG--QVVGRIKDMIIRGGENI 135
IG DGY +V GR KDMIIRGGENI
Sbjct: 68 --------------------DIGSM------------DGYSYCKVNGRSKDMIIRGGENI 95
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
YP EIE+F+ THP V EA GV D RMGEEV IKL E + E
Sbjct: 96 YPAEIEQFLHTHPKVKEAQVVGVKDARMGEEVCACIKLVEGQECTTEE 143
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 56/79 (70%)
Query: 407 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 466
Y +V GR KDMIIRGGENIYP EIE+F+ THP V EA GV D RMGEEV IKL E
Sbjct: 77 YCKVNGRSKDMIIRGGENIYPAEIEQFLHTHPKVKEAQVVGVKDARMGEEVCACIKLVEG 136
Query: 467 AKLNADDIRTFCKGKVSKF 485
+ ++IR FCKG+V+ F
Sbjct: 137 QECTTEEIRDFCKGQVAHF 155
>gi|209515774|ref|ZP_03264637.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
gi|209503801|gb|EEA03794.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
Length = 576
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 88/181 (48%), Gaps = 40/181 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + K+VD IVP G GEL RG+ MLGYW D+ KT+E+I
Sbjct: 381 DPLDKRTTTVGRIQPHLEVKIVDPLGNIVPVGETGELCTRGYSVMLGYWGDDVKTRESI- 439
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D L GY +VG
Sbjct: 440 VDGWMHTG-------------------------------------DLATLDAQGYCNIVG 462
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGENIYP+EIEEF+ HP + +GVPD + GEEV I L+ + A
Sbjct: 463 RLKDMLIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDTKYGEEVCAWIVLRAGEQATAE 522
Query: 183 E 183
E
Sbjct: 523 E 523
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L GY +VGR+KDM+IRGGENIYP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATLDAQGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDTKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + A++I+ FC+G+++ +
Sbjct: 508 CAWIVLRAGEQATAEEIQQFCQGQIAHY 535
>gi|91974734|ref|YP_567393.1| AMP-binding domain-containing protein [Rhodopseudomonas palustris
BisB5]
gi|91681190|gb|ABE37492.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB5]
Length = 564
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 37/162 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ KVVD RIVP G GEL RG+ MLGYW++ +KT + + W+ TG
Sbjct: 385 EVKVVDLEGRIVPRGQRGELCTRGYSIMLGYWDEAEKTADVLDRTGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ ++G+ +VGRIKDM+IRGGEN+YP+E
Sbjct: 436 ----------------------------DLAVIDDEGFCNIVGRIKDMVIRGGENLYPRE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
IEEF+ HP + + +GV D R GEE+ ++++ KL A
Sbjct: 468 IEEFLYRHPKIQDVQIFGVADNRYGEELCAWVRVRSGEKLTA 509
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 63/86 (73%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ ++G+ +VGRIKDM+IRGGEN+YP+EIEEF+ HP + + +GV D R GEE+
Sbjct: 436 DLAVIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADNRYGEEL 495
Query: 458 GISIKLKENAKLNADDIRTFCKGKVS 483
++++ KL ADDIR FC+G+++
Sbjct: 496 CAWVRVRSGEKLTADDIRAFCQGQIA 521
>gi|167587926|ref|ZP_02380314.1| acyl-CoA synthetase [Burkholderia ubonensis Bu]
Length = 575
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 91/178 (51%), Gaps = 40/178 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P +++ +T+ + K+VD + IVP G GEL +G+ M GYW+D++KT++ +
Sbjct: 380 DPLEMRTTTVGRIQPHLEVKIVDPSGGIVPVGATGELCTKGYSVMRGYWDDDEKTRDVL- 438
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D L +GY +VG
Sbjct: 439 IDGWMHTG-------------------------------------DLATLDANGYCNIVG 461
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
R+KDM+IRGGENIYP+EIEEF+ HP + A +GVPD + GEEV I L+ +L
Sbjct: 462 RLKDMLIRGGENIYPREIEEFLFRHPKIQSAQVFGVPDAKYGEEVCAWIVLRAGEQLT 519
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L +GY +VGR+KDM+IRGGENIYP+EIEEF+ HP + A +GVPD + GEEV
Sbjct: 447 DLATLDANGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSAQVFGVPDAKYGEEV 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ +L DD+R FC+G+++ +
Sbjct: 507 CAWIVLRAGEQLTEDDVRAFCQGQIAHY 534
>gi|420865927|ref|ZP_15329316.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0303]
gi|420870721|ref|ZP_15334103.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0726-RA]
gi|420875166|ref|ZP_15338542.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0726-RB]
gi|420989866|ref|ZP_15453022.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0206]
gi|421041581|ref|ZP_15504589.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0116-R]
gi|421045520|ref|ZP_15508520.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0116-S]
gi|392064643|gb|EIT90492.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0303]
gi|392066641|gb|EIT92489.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0726-RB]
gi|392070191|gb|EIT96038.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0726-RA]
gi|392184145|gb|EIV09796.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0206]
gi|392222509|gb|EIV48032.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0116-R]
gi|392234973|gb|EIV60471.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0116-S]
Length = 546
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 92/173 (53%), Gaps = 39/173 (22%)
Query: 19 FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD N+ V GEL RG+ MLGYW DE T+E + D W+ TG
Sbjct: 361 IEIKIVDPNSGETVQRRQSGELCTRGYSVMLGYWNDEAHTREVLDTDGWMHTG------- 413
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R+DGY ++GR+KDM+IRGGENIYP
Sbjct: 414 ------------------------------DLAVMRDDGYCTIIGRLKDMVIRGGENIYP 443
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK-ENAKLNAYEDKSISS 189
+EIEEF+ THP++ + + GVPDE+ GEE+ ++++ + ++A ++ +S
Sbjct: 444 REIEEFLLTHPDIEDVHVVGVPDEKYGEELCAWVRMRPDRVVIDAVAIRAFAS 496
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+R+DGY ++GR+KDM+IRGGENIYP+EIEEF+ THP++ + + GVPDE+ GEE+
Sbjct: 414 DLAVMRDDGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVGVPDEKYGEEL 473
Query: 458 GISIKLK-ENAKLNADDIRTFCKGKVSKF 485
++++ + ++A IR F G+++ +
Sbjct: 474 CAWVRMRPDRVVIDAVAIRAFASGRLAHY 502
>gi|159045943|ref|YP_001534737.1| acyl-CoA synthetase [Dinoroseobacter shibae DFL 12]
gi|157913703|gb|ABV95136.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Dinoroseobacter shibae DFL 12]
Length = 579
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 78/148 (52%), Gaps = 37/148 (25%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD ++ +VP G GELL RG+ M GYW++ KT E I D W+ TG
Sbjct: 400 EVKIVDEDSVVVPVGAQGELLTRGYSVMQGYWDEPDKTAEAIDADGWMHTG--------- 450
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D L DG+ ++ GR+KDMI+RGGEN+YP+E
Sbjct: 451 ----------------------------DLATLDVDGFCKITGRVKDMIVRGGENVYPRE 482
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEV 167
IEEF+ THP + + +G+PD++ GE V
Sbjct: 483 IEEFLYTHPAISQVQVFGIPDQKFGEIV 510
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L DG+ ++ GR+KDMI+RGGEN+YP+EIEEF+ THP + + +G+PD++ GE V
Sbjct: 451 DLATLDVDGFCKITGRVKDMIVRGGENVYPREIEEFLYTHPAISQVQVFGIPDQKFGEIV 510
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ K A +I FC+ ++ F
Sbjct: 511 VAWLVAKPGADPTEAEILDFCRDSIAHF 538
>gi|392419993|ref|YP_006456597.1| AMP-binding domain protein [Pseudomonas stutzeri CCUG 29243]
gi|390982181|gb|AFM32174.1| AMP-binding domain protein [Pseudomonas stutzeri CCUG 29243]
Length = 560
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 37/163 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++K+VD + +VP G GEL RG+ MLGYW + T++ I RW+ TG
Sbjct: 382 LESKIVDEHGAVVPRGQIGELCTRGYSVMLGYWNNPDATRDAIDGARWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ ++GY ++VGR KDMIIRGGEN+YP+
Sbjct: 434 -----------------------------DLAVMDDEGYIKIVGRNKDMIIRGGENVYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
EIEEF+ THP V + GVPD + GEE+ +KL ++ A
Sbjct: 465 EIEEFLFTHPAVADVQVIGVPDSKFGEEIVAWVKLHPGHQVEA 507
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
R + D V+ ++GY ++VGR KDMIIRGGEN+YP+EIEEF+ THP V + GVP
Sbjct: 426 GARWMHTGDLAVMDDEGYIKIVGRNKDMIIRGGENVYPREIEEFLFTHPAVADVQVIGVP 485
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
D + GEE+ +KL ++ A+ +R FCKG+++ F
Sbjct: 486 DSKFGEEIVAWVKLHPGHQVEAEALREFCKGRIAHF 521
>gi|146283536|ref|YP_001173689.1| AMP-binding protein [Pseudomonas stutzeri A1501]
gi|145571741|gb|ABP80847.1| probable AMP-binding enzyme [Pseudomonas stutzeri A1501]
Length = 560
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 37/163 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++K+VD + +VP G GEL RG+ MLGYW + T++ I RW+ TG
Sbjct: 382 LESKIVDEHGAVVPRGQIGELCTRGYSVMLGYWNNPDATRDAIDGARWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ ++GY ++VGR KDMIIRGGEN+YP+
Sbjct: 434 -----------------------------DLAVMDDEGYIKIVGRNKDMIIRGGENVYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
EIEEF+ THP V + GVPD + GEE+ +KL ++ A
Sbjct: 465 EIEEFLFTHPAVADVQVIGVPDSKFGEEIVAWVKLHPGHQVEA 507
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
R + D V+ ++GY ++VGR KDMIIRGGEN+YP+EIEEF+ THP V + GVP
Sbjct: 426 GARWMHTGDLAVMDDEGYIKIVGRNKDMIIRGGENVYPREIEEFLFTHPAVADVQVIGVP 485
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
D + GEE+ +KL ++ A+ +R FCKG+++ F
Sbjct: 486 DSKFGEEIVAWVKLHPGHQVEAEALREFCKGRIAHF 521
>gi|418291897|ref|ZP_12903853.1| AMP-binding domain protein [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379063336|gb|EHY76079.1| AMP-binding domain protein [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 560
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 37/163 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++K+VD + +VP G GEL RG+ MLGYW + T++ I RW+ TG
Sbjct: 382 LESKIVDEHGAVVPRGQIGELCTRGYSVMLGYWNNPDATRDAIDGARWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ ++GY ++VGR KDMIIRGGEN+YP+
Sbjct: 434 -----------------------------DLAVMDDEGYIKIVGRNKDMIIRGGENVYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
EIEEF+ THP V + GVPD + GEE+ +KL ++ A
Sbjct: 465 EIEEFLFTHPAVADVQVIGVPDSKFGEEIVAWVKLHPGHQVEA 507
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
R + D V+ ++GY ++VGR KDMIIRGGEN+YP+EIEEF+ THP V + GVP
Sbjct: 426 GARWMHTGDLAVMDDEGYIKIVGRNKDMIIRGGENVYPREIEEFLFTHPAVADVQVIGVP 485
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
D + GEE+ +KL ++ A+ +R FCKG+++ F
Sbjct: 486 DSKFGEEIVAWVKLHPGHQVEAEALREFCKGRIAHF 521
>gi|424743496|ref|ZP_18171806.1| AMP-binding enzyme [Acinetobacter baumannii WC-141]
gi|422943330|gb|EKU38352.1| AMP-binding enzyme [Acinetobacter baumannii WC-141]
Length = 564
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +DG+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQDGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD R GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDARYGEELCACIILHEHHQID 508
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ DG+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDAAGWMHTGDIAEMDQ-----DGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD R GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDARYGEELCACIILHEHHQIDEDAIRQFCKEHIS 521
>gi|262278713|ref|ZP_06056498.1| acyl-CoA synthetase /AMP-acid ligase II [Acinetobacter
calcoaceticus RUH2202]
gi|262259064|gb|EEY77797.1| acyl-CoA synthetase /AMP-acid ligase II [Acinetobacter
calcoaceticus RUH2202]
Length = 564
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +DG+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQDGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD R GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDARYGEELCACIILHEHHQID 508
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ DG+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDAAGWMHTGDIAEMDQ-----DGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD R GEE+ I L E+ +++ + IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDARYGEELCACIILHEHHQIDENSIRQFCKEHIS 521
>gi|118353816|ref|XP_001010173.1| AMP-binding enzyme family protein [Tetrahymena thermophila]
gi|89291940|gb|EAR89928.1| AMP-binding enzyme family protein [Tetrahymena thermophila SB210]
Length = 580
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 85/160 (53%), Gaps = 37/160 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+++ IVP G GE+ IRG M YW D + T +TI D+W++TG
Sbjct: 394 EVKIINKKGHIVPIGESGEICIRGFGVMEKYWADRKATSKTIDQDQWIKTG--------- 444
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D ++ E GY ++VGR+K+MIIRGGENIYPKE
Sbjct: 445 ----------------------------DMGIIDERGYMKIVGRLKEMIIRGGENIYPKE 476
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKL 179
IEE++++H ++ + GVPDE+ GEE IKLK++ L
Sbjct: 477 IEEYLRSHRSIQDVQVLGVPDEKFGEETFALIKLKQDQVL 516
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 64/88 (72%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E GY ++VGR+K+MIIRGGENIYPKEIEE++++H ++ + GVPDE+ GEE
Sbjct: 445 DMGIIDERGYMKIVGRLKEMIIRGGENIYPKEIEEYLRSHRSIQDVQVLGVPDEKFGEET 504
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKLK++ L DI +CKG+++ +
Sbjct: 505 FALIKLKQDQVLEGKDIFEYCKGQIAHY 532
>gi|443468114|ref|ZP_21058351.1| Acetoacetyl-CoA synthetase [Pseudomonas pseudoalcaligenes KF707]
gi|442897184|gb|ELS24180.1| Acetoacetyl-CoA synthetase [Pseudomonas pseudoalcaligenes KF707]
Length = 566
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 82/162 (50%), Gaps = 39/162 (24%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD RIVP GT GEL RG+ MLGYW + Q T E I R
Sbjct: 369 ELRVTTVGRTQPHLESKIVDAEGRIVPRGTIGELCTRGYSVMLGYWNNPQATAEAIDAGR 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + E+GY +VGR K
Sbjct: 429 WMHTG-------------------------------------DLASMDENGYVCIVGRSK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
DMIIRGGENIYP+E+EEF THP V + G+P + GEE+
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSKYGEEI 493
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 58/96 (60%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
AGR + D + E+GY +VGR KDMIIRGGENIYP+E+EEF THP V + G+P
Sbjct: 426 AGRWMHTGDLASMDENGYVCIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIP 485
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ GEE+ +K ++++ + K +++ F
Sbjct: 486 CSKYGEEIVAWVKFHPGHSATEEELKAWAKERIAHF 521
>gi|407694368|ref|YP_006819156.1| long-chain-fatty-acid-CoA ligase [Alcanivorax dieselolei B5]
gi|407251706|gb|AFT68813.1| Long-chain-fatty-acid-CoA ligase, putative [Alcanivorax dieselolei
B5]
Length = 560
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 81/163 (49%), Gaps = 37/163 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ KVVD VP G GEL RG+ MLGYW + T I D W+ TG
Sbjct: 381 LETKVVDEQGNTVPRGEIGELCTRGYSVMLGYWNNPDATAGAIDDDGWMHTG-------- 432
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ + GY ++VGR KDMIIRGGENIYP+
Sbjct: 433 -----------------------------DLAVMDDAGYVRIVGRSKDMIIRGGENIYPR 463
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
EIEEF+ THP V++ G+PD++ GEE+ +KLK + +A
Sbjct: 464 EIEEFLYTHPAVVDVQVIGIPDDKYGEEIVAWVKLKSGEQADA 506
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 64/88 (72%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ + GY ++VGR KDMIIRGGENIYP+EIEEF+ THP V++ G+PD++ GEE+
Sbjct: 433 DLAVMDDAGYVRIVGRSKDMIIRGGENIYPREIEEFLYTHPAVVDVQVIGIPDDKYGEEI 492
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+KLK + +A+ +R +CK +++ F
Sbjct: 493 VAWVKLKSGEQADAEVLRDYCKNRIAHF 520
>gi|377565797|ref|ZP_09795077.1| putative fatty-acid--CoA ligase [Gordonia sputi NBRC 100414]
gi|377527010|dbj|GAB40242.1| putative fatty-acid--CoA ligase [Gordonia sputi NBRC 100414]
Length = 547
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 95/196 (48%), Gaps = 48/196 (24%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + KV+D +P G GE RG+ M GYW + +KT E +
Sbjct: 354 DPLELRVGTVGRVGPHLEIKVIDPITGETLPRGETGEFCTRGYSVMSGYWNEPEKTAEAL 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ TG D V+ + Y ++
Sbjct: 414 DADGWMHTG-------------------------------------DLAVMDPNSYARIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN-AKLN 180
GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDER GEE+ I+L++ A L
Sbjct: 437 GRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDERYGEELMAWIQLRDGVADLT 496
Query: 181 AYEDKSISSDYHEFET 196
A D EF T
Sbjct: 497 A-------DDVREFAT 505
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ + Y ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDER GEE+
Sbjct: 423 DLAVMDPNSYARITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDERYGEEL 482
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSK 484
I+L++ A L ADD+R F GK+++
Sbjct: 483 MAWIQLRDGVADLTADDVREFATGKIAR 510
>gi|334349356|ref|XP_001376331.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Monodelphis domestica]
Length = 1033
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 87/176 (49%), Gaps = 44/176 (25%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK++D + + GEL IRG+C MLGYW+D QKT+E I D+W TG
Sbjct: 858 EAKILDLQTGKELERNMAGELCIRGYCVMLGYWDDPQKTEEAIDEDKWYWTG-------- 909
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E+G+ ++VGR KDMIIRGGENIYP
Sbjct: 910 -----------------------------DVATIDEEGFCRIVGRSKDMIIRGGENIYPA 940
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK------LNAYEDKSIS 188
E+E+F HP + E GV D R+GEE+ I+LK AK L AY IS
Sbjct: 941 ELEDFFHKHPMIQEVQVIGVKDHRLGEEICACIRLKGTAKDITPEDLKAYCKGKIS 996
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+G+ ++VGR KDMIIRGGENIYP E+E+F HP + E GV D R+GEE+
Sbjct: 910 DVATIDEEGFCRIVGRSKDMIIRGGENIYPAELEDFFHKHPMIQEVQVIGVKDHRLGEEI 969
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSKF 485
I+LK AK + +D++ +CKGK+S F
Sbjct: 970 CACIRLKGTAKDITPEDLKAYCKGKISHF 998
>gi|420256453|ref|ZP_14759297.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. BT03]
gi|398043174|gb|EJL36103.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. BT03]
Length = 576
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 88/179 (49%), Gaps = 40/179 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + KVVD IVP G GEL RG+ M GYW DE KT+E++
Sbjct: 381 DPLDKRTTTVGRIQPHLEVKVVDPLGSIVPVGETGELCTRGYSVMNGYWGDEAKTRESV- 439
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + +GY +VG
Sbjct: 440 VDGWMHTG-------------------------------------DLATIDAEGYCNIVG 462
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
R+KDM+IRGGENIYP+EIEEF+ HP + A +GVPD + GEEV I ++ L A
Sbjct: 463 RLKDMLIRGGENIYPREIEEFLFRHPKIQSAQVFGVPDSKYGEEVCAWIVVRAGEHLTA 521
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGR+KDM+IRGGENIYP+EIEEF+ HP + A +GVPD + GEEV
Sbjct: 448 DLATIDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSAQVFGVPDSKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I ++ L A+D++ FC+G+++ +
Sbjct: 508 CAWIVVRAGEHLTAEDVQEFCRGQIAHY 535
>gi|126740263|ref|ZP_01755952.1| acyl-CoA synthase [Roseobacter sp. SK209-2-6]
gi|126718718|gb|EBA15431.1| acyl-CoA synthase [Roseobacter sp. SK209-2-6]
Length = 582
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 85/165 (51%), Gaps = 40/165 (24%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+PTD + T+ + K++D + +IVP G GEL RG+ M GYWED +KT E+
Sbjct: 394 DPTDKRCETVGRVHPHLEVKIIDQDGQIVPVGQQGELCTRGYSVMKGYWEDVKKTGEST- 452
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D V ++G+ +VG
Sbjct: 453 VDGWMHTG-------------------------------------DLAVFDKEGFCSIVG 475
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
R+KDMIIRGGENIYP+EIEE++ HP V + +G+PDE GEEV
Sbjct: 476 RVKDMIIRGGENIYPREIEEYLMRHPKVSDVQVFGIPDETFGEEV 520
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V ++G+ +VGR+KDMIIRGGENIYP+EIEE++ HP V + +G+PDE GEEV
Sbjct: 461 DLAVFDKEGFCSIVGRVKDMIIRGGENIYPREIEEYLMRHPKVSDVQVFGIPDETFGEEV 520
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
K L +++R G+++ F
Sbjct: 521 CAWAIAKPGMDLTEEELRNALNGQIAHF 548
>gi|421595874|ref|ZP_16039823.1| AMP-binding domain protein, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404272017|gb|EJZ35748.1| AMP-binding domain protein, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 469
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 39/186 (20%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + ST+ + KVVD RIV G GEL RG+ MLGYWE+++KT + +
Sbjct: 273 DPLERRVSTVGRIHPHVEVKVVDLEGRIVKRGQRGELCTRGYSVMLGYWEEKEKTADVLD 332
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
+ W+ TG D L ++GY +VG
Sbjct: 333 ANGWMHTG-------------------------------------DLATLDDEGYCNIVG 355
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
RIKDM+IRGGEN+YP+EIEEF+ HP + + +GV D R GEE+ I+++ +L A
Sbjct: 356 RIKDMVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADSRYGEELCAWIRVRSGEQLTAE 415
Query: 183 EDKSIS 188
+ ++
Sbjct: 416 DVRAFC 421
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 62/86 (72%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L ++GY +VGRIKDM+IRGGEN+YP+EIEEF+ HP + + +GV D R GEE+
Sbjct: 341 DLATLDDEGYCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADSRYGEEL 400
Query: 458 GISIKLKENAKLNADDIRTFCKGKVS 483
I+++ +L A+D+R FC+G+++
Sbjct: 401 CAWIRVRSGEQLTAEDVRAFCEGQIA 426
>gi|239816802|ref|YP_002945712.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
gi|239803379|gb|ACS20446.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
Length = 509
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 94/190 (49%), Gaps = 41/190 (21%)
Query: 5 NPTDLQFSTLSS----SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKET 60
NP D L S S +A+V+D VP G+ GEL IRG M GY+++E+ T+ +
Sbjct: 321 NPLDPALRKLGSVGRASGCEARVIDAALAEVPDGSTGELAIRGPNVMRGYYKNEEATRAS 380
Query: 61 IGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQV 120
PD WLRTG + GFF+ V
Sbjct: 381 FTPDGWLRTGDLG---------------------HRDADGFFF----------------V 403
Query: 121 VGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
GRIK++II+GGENI P+EI+E + HP VLEA A GVPD G+E+G+ I L++
Sbjct: 404 TGRIKELIIKGGENIAPREIDEALLRHPAVLEAAAVGVPDRHYGQEIGVCIVLRDGCACT 463
Query: 181 AYEDKSISSD 190
E ++ S++
Sbjct: 464 EDELRAFSTE 473
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 25/141 (17%)
Query: 353 TTRKVALTWPNSMDSEARIYHYKKYLREEENITVPDSAGRSIFEKDQFVLR--------E 404
+T ++A+ PN M + Y + EE A R+ F D + LR
Sbjct: 355 STGELAIRGPNVM---------RGYYKNEE-------ATRASFTPDGW-LRTGDLGHRDA 397
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DG+ V GRIK++II+GGENI P+EI+E + HP VLEA A GVPD G+E+G+ I L+
Sbjct: 398 DGFFFVTGRIKELIIKGGENIAPREIDEALLRHPAVLEAAAVGVPDRHYGQEIGVCIVLR 457
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+ D++R F + ++
Sbjct: 458 DGCACTEDELRAFSTEALGRY 478
>gi|410620071|ref|ZP_11330954.1| fatty-acyl-CoA synthase [Glaciecola polaris LMG 21857]
gi|410160407|dbj|GAC35092.1| fatty-acyl-CoA synthase [Glaciecola polaris LMG 21857]
Length = 562
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 80/167 (47%), Gaps = 37/167 (22%)
Query: 17 SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTS 76
+ + K+VD NR++P G GE+ RG+ M GYW D +T ETI P WL +G
Sbjct: 381 ARIEVKLVDEQNRVIPVGERGEVCTRGYSVMRGYWNDPVRTAETIDPGGWLHSG------ 434
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
D V+ DGY +VGR KDMIIRGGENIY
Sbjct: 435 -------------------------------DIGVMDADGYVTIVGRSKDMIIRGGENIY 463
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
PKEIEEF+ THP V + +G+ GEEV I LK + E
Sbjct: 464 PKEIEEFLYTHPAVQDIQVFGIAHSDYGEEVCAWICLKPGSSACVSE 510
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 57/95 (60%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
G + D V+ DGY +VGR KDMIIRGGENIYPKEIEEF+ THP V + +G+
Sbjct: 428 GGWLHSGDIGVMDADGYVTIVGRSKDMIIRGGENIYPKEIEEFLYTHPAVQDIQVFGIAH 487
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
GEEV I LK + +I +CK +++ F
Sbjct: 488 SDYGEEVCAWICLKPGSSACVSEITAYCKNQIAHF 522
>gi|170694322|ref|ZP_02885476.1| AMP-dependent synthetase and ligase [Burkholderia graminis C4D1M]
gi|170140745|gb|EDT08919.1| AMP-dependent synthetase and ligase [Burkholderia graminis C4D1M]
Length = 576
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 89/181 (49%), Gaps = 40/181 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + K++D IVP G GEL RG+ M GYW DE+KT+E+I
Sbjct: 381 DPLDKRTTTVGRIQPHLEVKIIDPLGNIVPVGETGELCTRGYSVMQGYWGDEEKTRESI- 439
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D L +GY +VG
Sbjct: 440 VDGWMHTG-------------------------------------DLATLDAEGYCNIVG 462
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV + L+ + A
Sbjct: 463 RLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDAKYGEEVCAWVVLRSGEQATAE 522
Query: 183 E 183
E
Sbjct: 523 E 523
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L +GY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATLDAEGYCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDAKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ L+ + A++I+ FC G+++ +
Sbjct: 508 CAWVVLRSGEQATAEEIQQFCHGQIAHY 535
>gi|407715183|ref|YP_006835748.1| fatty-acyl-CoA synthase [Burkholderia phenoliruptrix BR3459a]
gi|407237367|gb|AFT87566.1| fatty-acyl-CoA synthase [Burkholderia phenoliruptrix BR3459a]
Length = 576
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 89/181 (49%), Gaps = 40/181 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + K+VD IVP G GEL RG+ M GYW DE+KT+E+I
Sbjct: 381 DPLDKRTTTVGRIQPHLEVKIVDPLGNIVPVGETGELCTRGYSVMQGYWGDEEKTRESI- 439
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + +GY +VG
Sbjct: 440 VDGWMHTG-------------------------------------DLATIDAEGYCNIVG 462
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGENIYP+EIEEF+ HP + +GVPD + GEEV + L+ + A
Sbjct: 463 RLKDMLIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDAKYGEEVCAWVVLRSGEQATAE 522
Query: 183 E 183
E
Sbjct: 523 E 523
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGR+KDM+IRGGENIYP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATIDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDAKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ L+ + A++I+ FC+G+++ +
Sbjct: 508 CAWVVLRSGEQATAEEIQQFCQGQIAHY 535
>gi|326383718|ref|ZP_08205403.1| AMP-dependent synthetase and ligase [Gordonia neofelifaecis NRRL
B-59395]
gi|326197482|gb|EGD54671.1| AMP-dependent synthetase and ligase [Gordonia neofelifaecis NRRL
B-59395]
Length = 558
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 90/174 (51%), Gaps = 40/174 (22%)
Query: 8 DLQFSTLS--SSSFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPD 64
DL+ +T+ + K+ D +P G GE RG+ M GYW D +KT + + D
Sbjct: 367 DLRVATVGRVGPHLEIKIADPITGETLPRGETGEFRTRGYSVMKGYWNDPEKTADALDAD 426
Query: 65 RWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRI 124
W+ TG D V+ +DGY ++ GRI
Sbjct: 427 GWMATG-------------------------------------DLAVMGDDGYVRITGRI 449
Query: 125 KDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
KDM+IRGGENIYP+EIEEF+ THP++++A GVPDE+ GEE+ I+++E A+
Sbjct: 450 KDMVIRGGENIYPREIEEFLYTHPDIVDAQVIGVPDEKYGEELMAWIRVREGAQ 503
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +DGY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++++A GVPDE+ GEE+
Sbjct: 433 DLAVMGDDGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDIVDAQVIGVPDEKYGEEL 492
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSK 484
I+++E A+ + A+ IR F G +S+
Sbjct: 493 MAWIRVREGAQPMTAETIREFAAGNISR 520
>gi|299770603|ref|YP_003732629.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
oleivorans DR1]
gi|298700691|gb|ADI91256.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
oleivorans DR1]
Length = 564
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KTKE I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTKEVIDSAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +DG+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQDGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD R GEE+ I L ++ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDARYGEELCACIILHDHHQID 508
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V DSAG I E DQ DG+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTKEVIDSAGWMHTGDIAEMDQ-----DGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD R GEE+ I L ++ +++ + IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDARYGEELCACIILHDHHQIDENSIRQFCKEHIS 521
>gi|385207668|ref|ZP_10034536.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. Ch1-1]
gi|385180006|gb|EIF29282.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. Ch1-1]
Length = 576
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 89/181 (49%), Gaps = 40/181 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + K+VD IVP G GEL RG+ M GYW+DE KT+E+I
Sbjct: 381 DPLDKRTTTVGRIQPHLEVKIVDPLGNIVPVGETGELCTRGYSVMQGYWDDEAKTRESI- 439
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D +GY +VG
Sbjct: 440 VDGWMHTG-------------------------------------DLATFDAEGYCNIVG 462
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGENIYP+EIEEF+ HP + +GVPD + GEEV + L+ + +A
Sbjct: 463 RLKDMLIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWVVLRSGEQASAE 522
Query: 183 E 183
E
Sbjct: 523 E 523
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 59/81 (72%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
+GY +VGR+KDM+IRGGENIYP+EIEEF+ HP + +GVPD + GEEV + L+
Sbjct: 455 EGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWVVLR 514
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+ +A++I+ FC+G+++ +
Sbjct: 515 SGEQASAEEIQQFCQGQIAHY 535
>gi|390569476|ref|ZP_10249761.1| AMP-binding domain protein [Burkholderia terrae BS001]
gi|389938336|gb|EIN00180.1| AMP-binding domain protein [Burkholderia terrae BS001]
Length = 576
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 88/179 (49%), Gaps = 40/179 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + KVVD IVP G GEL RG+ M GYW DE KT+E++
Sbjct: 381 DPLDKRTTTVGRIQPHLEVKVVDPLGNIVPVGETGELCTRGYSVMDGYWGDEAKTRESV- 439
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + +GY +VG
Sbjct: 440 VDGWMHTG-------------------------------------DLATIDTEGYCNIVG 462
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
R+KDM+IRGGENIYP+EIEEF+ HP + A +GVPD + GEEV I ++ L A
Sbjct: 463 RLKDMLIRGGENIYPREIEEFLFRHPKIQSAQVFGVPDSKYGEEVCAWIVVRAGEHLTA 521
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGR+KDM+IRGGENIYP+EIEEF+ HP + A +GVPD + GEEV
Sbjct: 448 DLATIDTEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSAQVFGVPDSKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I ++ L A+D++ FC+G+++ +
Sbjct: 508 CAWIVVRAGEHLTAEDVQEFCRGQIAHY 535
>gi|433462785|ref|ZP_20420357.1| AMP-binding domain protein [Halobacillus sp. BAB-2008]
gi|432188356|gb|ELK45556.1| AMP-binding domain protein [Halobacillus sp. BAB-2008]
Length = 546
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 94/188 (50%), Gaps = 40/188 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P DL+ +++ + K+++ +P G PGEL RG+ M GY+++E+ T+ +
Sbjct: 353 DPIDLRVTSVGRVHPHVEVKIIEPATGEELPPGVPGELCTRGYLVMAGYYKNEEATEAAV 412
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
PD WL TG D V +GY ++
Sbjct: 413 DPDGWLHTG-------------------------------------DVAVCSTEGYIEIT 435
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIKDMIIRGGEN+YP+EIEEF+ HP+VL+ GVPDE+ GEEV + K N L
Sbjct: 436 GRIKDMIIRGGENVYPREIEEFLYKHPDVLDVQIVGVPDEKFGEEVMAFLIPKANVTLAE 495
Query: 182 YEDKSISS 189
+ ++ S
Sbjct: 496 EDIRAFCS 503
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 60/87 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V +GY ++ GRIKDMIIRGGEN+YP+EIEEF+ HP+VL+ GVPDE+ GEEV
Sbjct: 422 DVAVCSTEGYIEITGRIKDMIIRGGENVYPREIEEFLYKHPDVLDVQIVGVPDEKFGEEV 481
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
+ K N L +DIR FC G +SK
Sbjct: 482 MAFLIPKANVTLAEEDIRAFCSGSISK 508
>gi|372268510|ref|ZP_09504558.1| long-chain-fatty-acid--CoA ligase [Alteromonas sp. S89]
Length = 544
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 92/182 (50%), Gaps = 41/182 (22%)
Query: 5 NPTD-LQFSTLSSS--SFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
NP + +Q T+ + S + KV+D N +P TPGEL +RG M GYWE + T ETI
Sbjct: 351 NPAEAVQLGTVGVAVPSTEVKVIDDNGNDLPNNTPGELCVRGPQVMKGYWERPEATAETI 410
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ WL+TG D V+++DGY ++V
Sbjct: 411 DSEGWLKTG-------------------------------------DMAVIQDDGYIKIV 433
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
R KDMII G N+YP EIE+ + HP V EA A G+PDER GE V + + +K +A L A
Sbjct: 434 DRKKDMIIVSGFNVYPNEIEDIVSAHPKVTEAAAVGIPDERSGEAVKLFV-VKADASLTA 492
Query: 182 YE 183
E
Sbjct: 493 EE 494
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+++DGY ++V R KDMII G N+YP EIE+ + HP V EA A G+PDER GE V
Sbjct: 420 DMAVIQDDGYIKIVDRKKDMIIVSGFNVYPNEIEDIVSAHPKVTEAAAVGIPDERSGEAV 479
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ + +K +A L A+++ +C+ ++ +
Sbjct: 480 KLFV-VKADASLTAEEVVAYCRENMTAY 506
>gi|357027401|ref|ZP_09089479.1| AMP-binding domain protein [Mesorhizobium amorphae CCNWGS0123]
gi|355540700|gb|EHH09898.1| AMP-binding domain protein [Mesorhizobium amorphae CCNWGS0123]
Length = 588
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 89/187 (47%), Gaps = 39/187 (20%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + ST+ + K +D V G PGEL RG+ M GYW+D++KT+E I
Sbjct: 392 DPLEKRVSTVGRIHPHVEVKAIDAEGATVAVGEPGELCTRGYSVMKGYWDDQEKTREAID 451
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + +GY +VG
Sbjct: 452 ADGWMHTG-------------------------------------DLATIDAEGYCNIVG 474
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGEN+YP+E+EEF+ HP V E +G+PD + GEE+ I L+
Sbjct: 475 RVKDMVIRGGENVYPREVEEFLYRHPKVKEVQVFGIPDPKYGEELCAWIVLRPGQTATEQ 534
Query: 183 EDKSISS 189
E K+ +
Sbjct: 535 EIKAFCT 541
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGR+KDM+IRGGEN+YP+E+EEF+ HP V E +G+PD + GEE+
Sbjct: 460 DLATIDAEGYCNIVGRVKDMVIRGGENVYPREVEEFLYRHPKVKEVQVFGIPDPKYGEEL 519
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ +I+ FC G+++ +
Sbjct: 520 CAWIVLRPGQTATEQEIKAFCTGQIAHY 547
>gi|386011355|ref|YP_005929632.1| AMP-binding protein [Pseudomonas putida BIRD-1]
gi|313498061|gb|ADR59427.1| AMP-binding domain protein [Pseudomonas putida BIRD-1]
Length = 560
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 86/168 (51%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSSFQA--KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + Q K+VD + IVP G GEL RG+ MLGYW++ Q T + I P
Sbjct: 369 ELRVTTVGRTQPQLENKLVDADGCIVPRGEIGELCTRGYSVMLGYWDNPQATADAIDPAG 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ +G D V+ E GY ++VGR K
Sbjct: 429 WMHSG-------------------------------------DLAVMDEQGYVRIVGRNK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V +A G+P R GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIKL 499
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V +A G+P R GEE+
Sbjct: 434 DLAVMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKL ++++ +CK +++ F
Sbjct: 494 VAWIKLHPGHSATVEELQGWCKARIAHF 521
>gi|293608450|ref|ZP_06690753.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427422891|ref|ZP_18913065.1| AMP-binding enzyme [Acinetobacter baumannii WC-136]
gi|292829023|gb|EFF87385.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425700526|gb|EKU70109.1| AMP-binding enzyme [Acinetobacter baumannii WC-136]
Length = 564
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KTKE I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTKEVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + ++G+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQEGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD R GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDARYGEELCACIILHEHHQID 508
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ +G+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTKEVIDAAGWMHTGDIAEMDQ-----EGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD R GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDARYGEELCACIILHEHHQIDEDSIRQFCKEHIS 521
>gi|334345488|ref|YP_004554040.1| long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
gi|334102110|gb|AEG49534.1| Long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
Length = 555
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 85/161 (52%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+AK+V + + +P G GE RG+ M GYW++ ++T E I D W+ +G
Sbjct: 371 EAKIVGPDGKTLPIGEQGEYCSRGYAVMQGYWDEPERTAEAIDADGWMHSG--------- 421
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ E GY ++ GRIKDM+IRGGENIYP+E
Sbjct: 422 ----------------------------DLAVMDEKGYIRITGRIKDMVIRGGENIYPRE 453
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEEF+ THP + +A +GV DE++GEEV + K A+L+
Sbjct: 454 IEEFLLTHPQIQDAQVFGVADEKLGEEVCAWVIAKPGAELS 494
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++ GRIKDM+IRGGENIYP+EIEEF+ THP + +A +GV DE++GEEV
Sbjct: 422 DLAVMDEKGYIRITGRIKDMVIRGGENIYPREIEEFLLTHPQIQDAQVFGVADEKLGEEV 481
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ K A+L+ D + C+G ++ +
Sbjct: 482 CAWVIAKPGAELSVDGVLAHCRGNIAHY 509
>gi|299529445|ref|ZP_07042882.1| AMP-binding domain protein [Comamonas testosteroni S44]
gi|298722308|gb|EFI63228.1| AMP-binding domain protein [Comamonas testosteroni S44]
Length = 582
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 82/163 (50%), Gaps = 38/163 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD I+P G GEL RG+ M GYWEDE +T+E I ++W+ TG
Sbjct: 401 LEVKVVDPSTGEIMPPGQSGELCTRGYSVMHGYWEDEARTREAIDAEQWMHTG------- 453
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + +GY +VGRIKDM+IRGGENIYP
Sbjct: 454 ------------------------------DLATMDGEGYVNIVGRIKDMVIRGGENIYP 483
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
+EIEEF+ HPNV + GVPD R GEE+ I +K +L
Sbjct: 484 REIEEFLYRHPNVQDVQVVGVPDVRYGEELCAWIIVKPGLELG 526
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGRIKDM+IRGGENIYP+EIEEF+ HPNV + GVPD R GEE+
Sbjct: 454 DLATMDGEGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPNVQDVQVVGVPDVRYGEEL 513
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I +K +L D+IR FCKG+++ +
Sbjct: 514 CAWIIVKPGLELGEDEIREFCKGQIAHY 541
>gi|316931557|ref|YP_004106539.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
DX-1]
gi|315599271|gb|ADU41806.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
DX-1]
Length = 564
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 91/179 (50%), Gaps = 39/179 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + ST+ + KVVD + +IVP GT GEL RG+ MLGYW++ +KT + +
Sbjct: 368 DPEDRRVSTVGRIHPHVEVKVVDLDGKIVPRGTRGELCTRGYSVMLGYWDEPEKTADVLD 427
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ TG D + ++G+ +VG
Sbjct: 428 AAGWMHTG-------------------------------------DLATIDDEGFCNIVG 450
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
RIKDM+IRGGEN+YP+EIEEF+ HP + + +GV D+R GEE+ ++ + L A
Sbjct: 451 RIKDMVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADDRYGEELCAWVRPRPGESLTA 509
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 69/103 (66%), Gaps = 1/103 (0%)
Query: 381 EENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
E+ V D+AG + D + ++G+ +VGRIKDM+IRGGEN+YP+EIEEF+ HP +
Sbjct: 420 EKTADVLDAAGW-MHTGDLATIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKI 478
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
+ +GV D+R GEE+ ++ + L ADD+R FC+G+++
Sbjct: 479 QDVQIFGVADDRYGEELCAWVRPRPGESLTADDVRAFCQGQIA 521
>gi|86747706|ref|YP_484202.1| AMP-binding protein [Rhodopseudomonas palustris HaA2]
gi|86570734|gb|ABD05291.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
HaA2]
Length = 576
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 90/179 (50%), Gaps = 39/179 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + ST+ + KVVD RIVP G GEL RG+ MLGYW++ +KT + +
Sbjct: 380 DPEERRVSTVGRIHPHVEVKVVDLEGRIVPRGVRGELCTRGYSIMLGYWDEAEKTADVLD 439
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ TG D V+ ++G+ +VG
Sbjct: 440 AAGWMHTG-------------------------------------DLAVIDDEGFCNIVG 462
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
RIKDM+IRGGEN+YP+EIEEF+ HP + + +GV D R GEE+ ++++ L A
Sbjct: 463 RIKDMVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADSRYGEELCAWVRVRPGETLTA 521
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Query: 381 EENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
E+ V D+AG + D V+ ++G+ +VGRIKDM+IRGGEN+YP+EIEEF+ HP +
Sbjct: 432 EKTADVLDAAGW-MHTGDLAVIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKI 490
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
+ +GV D R GEE+ ++++ L ADDIR FC+G+++
Sbjct: 491 QDVQIFGVADSRYGEELCAWVRVRPGETLTADDIRGFCQGQIA 533
>gi|372269916|ref|ZP_09505964.1| AMP-binding domain protein [Marinobacterium stanieri S30]
Length = 562
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 86/167 (51%), Gaps = 38/167 (22%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
++KVVD +IVP G GEL RG+ ML YW +E T + I W+ TG
Sbjct: 384 LESKVVDPGTGQIVPRGEIGELCTRGYSVMLKYWNNEHATADAIDEAGWMHTG------- 436
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + ++GY Q+VGRIKDM+IRGGEN+YP
Sbjct: 437 ------------------------------DLATMDDEGYIQIVGRIKDMVIRGGENVYP 466
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
KEIEEF+ THP V E GVPD++ GEE+ IKL +A+ + ED
Sbjct: 467 KEIEEFLYTHPAVSEVQVTGVPDKKYGEELIAWIKLHGDAEEVSAED 513
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY Q+VGRIKDM+IRGGEN+YPKEIEEF+ THP V E GVPD++ GEE+
Sbjct: 437 DLATMDDEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYTHPAVSEVQVTGVPDKKYGEEL 496
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
IKL +A +++A+D+R FCKGK++ F
Sbjct: 497 IAWIKLHGDAEEVSAEDLREFCKGKITHF 525
>gi|26990764|ref|NP_746189.1| AMP-binding protein [Pseudomonas putida KT2440]
gi|24985764|gb|AAN69653.1|AE016600_3 long-chain-fatty-acid-CoA ligase, putative [Pseudomonas putida
KT2440]
Length = 560
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 86/168 (51%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSSFQA--KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + Q K+VD + IVP G GEL RG+ MLGYW++ Q T + I P
Sbjct: 369 ELRVTTVGRTQPQLENKLVDADGCIVPRGEIGELCTRGYSVMLGYWDNPQATADAIDPAG 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ +G D V+ E GY ++VGR K
Sbjct: 429 WMHSG-------------------------------------DLAVMDEQGYVRIVGRNK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V +A G+P R GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIKL 499
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V +A G+P R GEE+
Sbjct: 434 DLAVMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKL ++++ +CK +++ F
Sbjct: 494 VAWIKLHPGHSATVEELQGWCKARIAHF 521
>gi|406575797|ref|ZP_11051487.1| AMP-binding domain protein [Janibacter hoylei PVAS-1]
gi|404554795|gb|EKA60307.1| AMP-binding domain protein [Janibacter hoylei PVAS-1]
Length = 543
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 90/178 (50%), Gaps = 39/178 (21%)
Query: 15 SSSSFQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYK 73
S ++KVVD + +P G GEL RG+ MLGYW+ KT E I RW+ TG
Sbjct: 362 SMPHIESKVVDPVTGVTLPRGETGELCTRGYSVMLGYWQQPDKTAEAIDDARWMHTG--- 418
Query: 74 KTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGE 133
D + E GY ++VGRIKD++IRGGE
Sbjct: 419 ----------------------------------DLATMDEHGYVEIVGRIKDLVIRGGE 444
Query: 134 NIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN-AKLNAYEDKSISSD 190
NIYP+E+EEF+ THP++ + GVPDER GEE+ + L+E A L + + ++D
Sbjct: 445 NIYPREVEEFLYTHPSIADVQVIGVPDERYGEELMAWVVLREGVASLTVDDVREFAAD 502
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D + E GY ++VGRIKD++IRGGENIYP+E+EEF+ THP++ + GVPD
Sbjct: 412 ARWMHTGDLATMDEHGYVEIVGRIKDLVIRGGENIYPREVEEFLYTHPSIADVQVIGVPD 471
Query: 451 ERMGEEVGISIKLKEN-AKLNADDIRTFCKGKVSKF 485
ER GEE+ + L+E A L DD+R F K++ +
Sbjct: 472 ERYGEELMAWVVLREGVASLTVDDVREFAADKLAHY 507
>gi|323527839|ref|YP_004229992.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1001]
gi|323384841|gb|ADX56932.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1001]
Length = 576
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 89/181 (49%), Gaps = 40/181 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + K++D IVP G GEL RG+ M GYW DE+KT+E+I
Sbjct: 381 DPLDKRTTTVGRIQPHLEVKIIDPLGNIVPVGETGELCTRGYSVMQGYWGDEEKTRESI- 439
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + +GY +VG
Sbjct: 440 VDGWMHTG-------------------------------------DLATIDAEGYCNIVG 462
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGENIYP+EIEEF+ HP + +GVPD + GEEV + L+ + A
Sbjct: 463 RLKDMLIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDAKYGEEVCAWVVLRSGEQATAE 522
Query: 183 E 183
E
Sbjct: 523 E 523
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGR+KDM+IRGGENIYP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATIDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDAKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ L+ + A++I+ FC+G+++ +
Sbjct: 508 CAWVVLRSGEQATAEEIQQFCQGQIAHY 535
>gi|441519811|ref|ZP_21001483.1| putative fatty-acid--CoA ligase [Gordonia sihwensis NBRC 108236]
gi|441460564|dbj|GAC59444.1| putative fatty-acid--CoA ligase [Gordonia sihwensis NBRC 108236]
Length = 550
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 96/196 (48%), Gaps = 46/196 (23%)
Query: 8 DLQFSTLS--SSSFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPD 64
DL+ T+ + K+ D +P G GE RG+ M GYW D +KT E + D
Sbjct: 359 DLRVGTVGRVGPHLEIKIADPLTGETLPRGETGEFRTRGYSVMKGYWNDPEKTAEVLDAD 418
Query: 65 RWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRI 124
W+ TG D V+ ++GY ++ GRI
Sbjct: 419 GWMATG-------------------------------------DLGVMADNGYVRITGRI 441
Query: 125 KDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
KDM+IRGGENIYP+EIEEF+ THP++++A GVPDE+ GEE+ I+++E A D
Sbjct: 442 KDMVIRGGENIYPREIEEFLYTHPDIIDAQVIGVPDEKYGEELMAWIRVREGA------D 495
Query: 185 KSISSDYHEFETMYDS 200
+ + EF T + S
Sbjct: 496 ELTADSIREFATGHIS 511
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ ++GY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++++A GVPDE+ GEE+
Sbjct: 425 DLGVMADNGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDIIDAQVIGVPDEKYGEEL 484
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSK 484
I+++E A +L AD IR F G +S+
Sbjct: 485 MAWIRVREGADELTADSIREFATGHISR 512
>gi|330815048|ref|YP_004358753.1| AMP-binding protein [Burkholderia gladioli BSR3]
gi|327367441|gb|AEA58797.1| AMP-binding domain protein [Burkholderia gladioli BSR3]
Length = 588
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 80/165 (48%), Gaps = 38/165 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD IVP G GEL RG+ M GYW DE T+ I D W+ TG
Sbjct: 409 LEAKIVDAEGAIVPVGATGELCTRGYAVMAGYWGDEALTRRAI-VDGWMHTG-------- 459
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D E+G+ +VGR+KDM+IRGGENIYP+
Sbjct: 460 -----------------------------DLATFDEEGFCNIVGRLKDMLIRGGENIYPR 490
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
EIEEF+ HP + A +GVPD + GEEV I L+ ++ E
Sbjct: 491 EIEEFLFRHPKIQSAQVFGVPDPKYGEEVCAWIVLRAGEAMDEEE 535
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D E+G+ +VGR+KDM+IRGGENIYP+EIEEF+ HP + A +GVPD + GEEV
Sbjct: 460 DLATFDEEGFCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSAQVFGVPDPKYGEEV 519
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ ++ +++R FC+G+++ +
Sbjct: 520 CAWIVLRAGEAMDEEELRDFCRGQIAHY 547
>gi|339488366|ref|YP_004702894.1| AMP-binding domain-containing protein [Pseudomonas putida S16]
gi|338839209|gb|AEJ14014.1| AMP-binding domain-containing protein [Pseudomonas putida S16]
Length = 560
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 86/168 (51%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSSFQA--KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + Q K+VD + IVP G GEL RG+ MLGYW++ Q T + I P
Sbjct: 369 ELRVTTVGRTQPQLENKLVDADGCIVPRGEIGELCTRGYSVMLGYWDNPQATADAIDPAG 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ +G D V+ E GY ++VGR K
Sbjct: 429 WMHSG-------------------------------------DLAVMDEHGYVRIVGRNK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V +A G+P R GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIKL 499
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V +A G+P R GEE+
Sbjct: 434 DLAVMDEHGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKL ++++ +CK +++ F
Sbjct: 494 VAWIKLHPGHSATVEELQGWCKARIANF 521
>gi|86159431|ref|YP_466216.1| AMP-binding protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775942|gb|ABC82779.1| AMP-dependent synthetase and ligase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 546
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 84/168 (50%), Gaps = 38/168 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD R++P GTPGEL RG+ MLGYW D T+ I RW+ TG
Sbjct: 363 EIKIVDPTTGRVMPRGTPGELCTRGYSVMLGYWNDPHATRGAIDDGRWMHTG-------- 414
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E GY ++VGRIKDM++RGGENI+P+
Sbjct: 415 -----------------------------DLATIDEHGYVKIVGRIKDMVLRGGENIFPR 445
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
E+EEF+ T P V + GVPD + GEE+ +KL+ L E ++
Sbjct: 446 EVEEFLYTIPGVSDVQVIGVPDVKYGEELMAWVKLRPGVSLTGEEIRA 493
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 64/95 (67%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
GR + D + E GY ++VGRIKDM++RGGENI+P+E+EEF+ T P V + GVPD
Sbjct: 408 GRWMHTGDLATIDEHGYVKIVGRIKDMVLRGGENIFPREVEEFLYTIPGVSDVQVIGVPD 467
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ GEE+ +KL+ L ++IR +CKGK++ +
Sbjct: 468 VKYGEELMAWVKLRPGVSLTGEEIRAYCKGKIATY 502
>gi|350545798|ref|ZP_08915250.1| Long-chain-fatty-acid--CoA ligase [Candidatus Burkholderia kirkii
UZHbot1]
gi|350526419|emb|CCD40469.1| Long-chain-fatty-acid--CoA ligase [Candidatus Burkholderia kirkii
UZHbot1]
Length = 427
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 90/184 (48%), Gaps = 42/184 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + K++D IVP G GEL RG+ M GYW D++KT+E I
Sbjct: 260 DPLDKRTTTVGRIQPHLEVKIIDPLGNIVPVGETGELCTRGYSVMKGYWGDDEKTREAI- 318
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D L GY +VG
Sbjct: 319 VDGWMHTG-------------------------------------DLVTLDTQGYCNIVG 341
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVG--ISIKLKENAKLN 180
R+KDM+IRGGENIYP+EIEEF+ HP V +GVPDE+ GEEV I ++ +E A +
Sbjct: 342 RLKDMLIRGGENIYPREIEEFLFRHPKVQSVQVFGVPDEKYGEEVCAWIVVRPREQATED 401
Query: 181 AYED 184
D
Sbjct: 402 EMRD 405
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 55/84 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L GY +VGR+KDM+IRGGENIYP+EIEEF+ HP V +GVPDE+ GEEV
Sbjct: 327 DLVTLDTQGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKVQSVQVFGVPDEKYGEEV 386
Query: 458 GISIKLKENAKLNADDIRTFCKGK 481
I ++ + D++R F KGK
Sbjct: 387 CAWIVVRPREQATEDEMRDFYKGK 410
>gi|288555267|ref|YP_003427202.1| acetylCoA synthase AMP-binding subunit [Bacillus pseudofirmus OF4]
gi|288546427|gb|ADC50310.1| acetylCoA synthase, AMP-binding domain protein [Bacillus
pseudofirmus OF4]
Length = 548
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 85/167 (50%), Gaps = 38/167 (22%)
Query: 18 SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTS 76
+ + K+V+ N VP G GEL RG+ M GY+++ + TK I D WL TG
Sbjct: 368 NVEVKIVEPGTNDEVPRGVQGELCTRGYHVMKGYYKNPEATKAAITEDGWLHTG------ 421
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
D V+ E+GY ++ GR+KDMIIRGGENIY
Sbjct: 422 -------------------------------DLAVMDENGYCRITGRLKDMIIRGGENIY 450
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
P+EIEEF+ HP VL+ G+PDE+ GEEV IKLKE A E
Sbjct: 451 PREIEEFLYQHPKVLDVQVVGIPDEKYGEEVSAWIKLKEGESTTADE 497
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
Query: 370 RIYHY-KKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 428
R YH K Y + E + + D V+ E+GY ++ GR+KDMIIRGGENIYP+
Sbjct: 393 RGYHVMKGYYKNPEATKAAITEDGWLHTGDLAVMDENGYCRITGRLKDMIIRGGENIYPR 452
Query: 429 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
EIEEF+ HP VL+ G+PDE+ GEEV IKLKE AD++R C GK++ +
Sbjct: 453 EIEEFLYQHPKVLDVQVVGIPDEKYGEEVSAWIKLKEGESTTADELRKDCMGKIAAY 509
>gi|197118037|ref|YP_002138464.1| AMP-binding domain-containing protein [Geobacter bemidjiensis Bem]
gi|197087397|gb|ACH38668.1| acyl-CoA synthetase, AMP-forming [Geobacter bemidjiensis Bem]
Length = 549
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 98/184 (53%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ ST+ + + K+VD + +P G GEL RG+ M GY++ ++T + I
Sbjct: 354 DPIELKVSTVGRVLPNVELKIVDIESGAELPPGKQGELCTRGYLVMKGYYKMPEETAKAI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D V+ E+GY ++
Sbjct: 414 DADGWLHTG-------------------------------------DLAVMDENGYCKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIK+MIIRGGENIYP+EIEEF+ THPN+ + YGVPD + GE+V ++ LK+ ++++
Sbjct: 437 GRIKNMIIRGGENIYPREIEEFLYTHPNISDVQVYGVPDRKYGEQVMAAVVLKQGSEMSE 496
Query: 182 YEDK 185
E K
Sbjct: 497 AEVK 500
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 68/88 (77%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY ++ GRIK+MIIRGGENIYP+EIEEF+ THPN+ + YGVPD + GE+V
Sbjct: 423 DLAVMDENGYCKITGRIKNMIIRGGENIYPREIEEFLYTHPNISDVQVYGVPDRKYGEQV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++ LK+ ++++ +++ FC+G+++ +
Sbjct: 483 MAAVVLKQGSEMSEAEVKEFCRGRIANY 510
>gi|443632447|ref|ZP_21116626.1| AMP-binding domain-containing protein [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347270|gb|ELS61328.1| AMP-binding domain-containing protein [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 549
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 80/153 (52%), Gaps = 37/153 (24%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY++DE+ T++ I PD WL TG
Sbjct: 386 GVQGELCTRGYHVMKGYYKDEEATRKAINPDGWLFTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP +L+
Sbjct: 423 --------------DLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPAILDV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
GVPD + GEE IKLK+ ++ E K+
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKSVSPEELKA 501
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Query: 370 RIYHYKK-YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 428
R YH K Y ++EE + +F D V+ EDGY ++ GR+KDM+IRGGENIYP+
Sbjct: 394 RGYHVMKGYYKDEEATRKAINPDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPR 453
Query: 429 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
EIEEF+ HP +L+ GVPD + GEE IKLK+ ++ ++++ +CKGK+++
Sbjct: 454 EIEEFLYRHPAILDVQVVGVPDAKFGEEAAAWIKLKDGKSVSPEELKAYCKGKIAR 509
>gi|431803379|ref|YP_007230282.1| AMP-binding protein [Pseudomonas putida HB3267]
gi|430794144|gb|AGA74339.1| AMP-binding domain protein [Pseudomonas putida HB3267]
Length = 560
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 86/168 (51%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSSFQA--KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + Q K+VD + IVP G GEL RG+ MLGYW++ Q T + I P
Sbjct: 369 ELRVTTVGRTQPQLENKLVDADGCIVPRGEIGELCTRGYSVMLGYWDNPQATADAIDPAG 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ +G D V+ E GY ++VGR K
Sbjct: 429 WMHSG-------------------------------------DLAVMDEHGYVRIVGRNK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V +A G+P R GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIKL 499
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V +A G+P R GEE+
Sbjct: 434 DLAVMDEHGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKL ++++ +CK +++ F
Sbjct: 494 VAWIKLHPGHSATVEELQGWCKARIAHF 521
>gi|431926248|ref|YP_007239282.1| acyl-CoA synthetase [Pseudomonas stutzeri RCH2]
gi|431824535|gb|AGA85652.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
stutzeri RCH2]
Length = 560
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 81/155 (52%), Gaps = 37/155 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++K+VD + +VP G GEL RG+ MLGYW + T++ I RW+ TG
Sbjct: 382 LESKIVDEHGAVVPRGQIGELCTRGYSVMLGYWNNPDATRDAIDGARWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ ++GY ++VGR KDMIIRGGEN+YP+
Sbjct: 434 -----------------------------DLAVMDDEGYIKIVGRNKDMIIRGGENVYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
EIEEF+ THP V + GVPD + GEE+ +KL
Sbjct: 465 EIEEFLFTHPAVADVQVIGVPDSKFGEEIVAWVKL 499
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 64/96 (66%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
R + D V+ ++GY ++VGR KDMIIRGGEN+YP+EIEEF+ THP V + GVP
Sbjct: 426 GARWMHTGDLAVMDDEGYIKIVGRNKDMIIRGGENVYPREIEEFLFTHPAVADVQVIGVP 485
Query: 450 DERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
D + GEE+ +KL ++ + +R FCKG+++ F
Sbjct: 486 DSKFGEEIVAWVKLHPGHEVEGEALREFCKGRIAHF 521
>gi|339501874|ref|YP_004689294.1| short-chain-fatty-acid--CoA ligase FadK [Roseobacter litoralis Och
149]
gi|338755867|gb|AEI92331.1| short-chain-fatty-acid--CoA ligase FadK [Roseobacter litoralis Och
149]
Length = 565
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 80/160 (50%), Gaps = 37/160 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD V G GELL RG+ M GYWED+ +T +I W+ TG +
Sbjct: 391 EVKIVDDTGNTVKTGEQGELLTRGYSVMQGYWEDDAQTAASIDAQGWMHTGDLAR----- 445
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
L DG+ + GR+KDMI+RGGENIYP+E
Sbjct: 446 --------------------------------LDADGFCTITGRLKDMILRGGENIYPRE 473
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKL 179
IEEF+ THP++L+A +G+PD ++GE V I + + L
Sbjct: 474 IEEFLYTHPDILQAQVFGIPDNKLGEAVCAWIVARAGSDL 513
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 59/84 (70%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
L DG+ + GR+KDMI+RGGENIYP+EIEEF+ THP++L+A +G+PD ++GE V I
Sbjct: 446 LDADGFCTITGRLKDMILRGGENIYPREIEEFLYTHPDILQAQVFGIPDNKLGEAVCAWI 505
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
+ + L D++ FC+ ++ F
Sbjct: 506 VARAGSDLAETDVQDFCRSAIAHF 529
>gi|359430350|ref|ZP_09221361.1| putative fatty-acid--CoA ligase [Acinetobacter sp. NBRC 100985]
gi|358234207|dbj|GAB02900.1| putative fatty-acid--CoA ligase [Acinetobacter sp. NBRC 100985]
Length = 564
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 37/172 (21%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EVKIVDLEGQIVPTGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +G+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDAEGFVKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDY 191
IE+F+ THP++ + G+PD R GEE+ I L E+ + + +S D+
Sbjct: 468 IEDFLYTHPDISDVQVIGLPDLRYGEELCACIILHEHHQSDEESIRSFCKDH 519
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Query: 380 EEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
EE+ V D+AG + D + +G+ ++ GRIKD++IRGGEN++PKEIE+F+ THP+
Sbjct: 419 EEKTREVIDAAGW-MHTGDIAEMDAEGFVKIKGRIKDVVIRGGENLFPKEIEDFLYTHPD 477
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
+ + G+PD R GEE+ I L E+ + + + IR+FCK +S
Sbjct: 478 ISDVQVIGLPDLRYGEELCACIILHEHHQSDEESIRSFCKDHIS 521
>gi|170720998|ref|YP_001748686.1| AMP-binding domain-containing protein [Pseudomonas putida W619]
gi|169759001|gb|ACA72317.1| AMP-dependent synthetase and ligase [Pseudomonas putida W619]
Length = 560
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 89/178 (50%), Gaps = 39/178 (21%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + + K+V+ + IVP G GEL RG+ MLGYW++ Q T + I P
Sbjct: 369 ELRVTTVGRTQPHLETKLVNADGCIVPRGEIGELCTRGYSVMLGYWDNPQATADAIDPAG 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ +G D V+ DG+ ++VGR K
Sbjct: 429 WMHSG-------------------------------------DLAVMDADGHVRIVGRNK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
DMIIRGGENIYP+E+EEF THP V +A G+P +R GEEV IKL A E
Sbjct: 452 DMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCDRYGEEVVAWIKLHPGHSATAEE 509
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ DG+ ++VGR KDMIIRGGENIYP+E+EEF THP V +A G+P +R GEEV
Sbjct: 434 DLAVMDADGHVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCDRYGEEV 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKL A++++ +CK +++ +
Sbjct: 494 VAWIKLHPGHSATAEELQGWCKARIAHY 521
>gi|84495288|ref|ZP_00994407.1| putative acyl-CoA synthetase [Janibacter sp. HTCC2649]
gi|84384781|gb|EAQ00661.1| putative acyl-CoA synthetase [Janibacter sp. HTCC2649]
Length = 550
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 86/161 (53%), Gaps = 39/161 (24%)
Query: 19 FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD +P G PGE +G+ MLGYW + KT E + D W+RTG
Sbjct: 366 LEVKIVDPVTLETLPHGEPGEFWTKGYSVMLGYWGQDDKTAEAL-VDGWMRTG------- 417
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ + G+ Q+ GRIKDM+IRGGENIYP
Sbjct: 418 ------------------------------DLAVMDDAGFLQITGRIKDMVIRGGENIYP 447
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++++A GVPDE+ GEE+ I++++ A+
Sbjct: 448 REIEEFLYTHPDIVDAQVIGVPDEKYGEELAAWIRMRDGAQ 488
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ + G+ Q+ GRIKDM+IRGGENIYP+EIEEF+ THP++++A GVPDE+ GEE+
Sbjct: 418 DLAVMDDAGFLQITGRIKDMVIRGGENIYPREIEEFLYTHPDIVDAQVIGVPDEKYGEEL 477
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSKF 485
I++++ A+ L A+ +R F GK++ +
Sbjct: 478 AAWIRMRDGAQPLTAETVRAFATGKLAHY 506
>gi|445428182|ref|ZP_21437917.1| AMP-binding enzyme [Acinetobacter baumannii OIFC021]
gi|444762248|gb|ELW86617.1| AMP-binding enzyme [Acinetobacter baumannii OIFC021]
Length = 564
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +DG+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQDGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 508
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ DG+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDAAGWMHTGDIAEMDQ-----DGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 521
>gi|302557512|ref|ZP_07309854.1| substrate-CoA ligase [Streptomyces griseoflavus Tu4000]
gi|302475130|gb|EFL38223.1| substrate-CoA ligase [Streptomyces griseoflavus Tu4000]
Length = 538
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 80/160 (50%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + +P G GEL RG+ MLGYW + +KT E + RW+ TG
Sbjct: 364 IEVKVVDPATGVTLPRGAAGELCTRGYSVMLGYWNEPEKTAEAVDAGRWMHTG------- 416
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY ++VGRIKDMIIRGGENIYP
Sbjct: 417 ------------------------------DLAVMREDGYVEIVGRIKDMIIRGGENIYP 446
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ HP + + G ER GEEV + ++ A
Sbjct: 447 REIEEFLYAHPKIADIQVVGTAHERYGEEVLACVVPRDPA 486
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E AGR + D V+REDGY ++VGRIKDMIIRGGENIYP+EIEEF+
Sbjct: 396 YWNEPEKTAEAVDAGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYA 455
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
HP + + G ER GEEV + ++ A +++R FC +++ +
Sbjct: 456 HPKIADIQVVGTAHERYGEEVLACVVPRDPADPPTLEELRAFCADRLAHY 505
>gi|409359014|ref|ZP_11237371.1| fatty-acyl-CoA synthase [Dietzia alimentaria 72]
Length = 549
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 87/180 (48%), Gaps = 44/180 (24%)
Query: 18 SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTS 76
+ + K+VD +P G GE RG+ MLGYW + KT + + W+RTG
Sbjct: 371 NLEIKIVDPSTGETLPRGEAGEFCTRGYSVMLGYWNEPAKTADAVDEAGWMRTG------ 424
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
D V+ +DGY + GRIKDM+IRGGENIY
Sbjct: 425 -------------------------------DIGVMDDDGYVTITGRIKDMVIRGGENIY 453
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDYHEFET 196
P+E+EEF+ THP++L+A GVPD + GEE+ ++LK D + HEF T
Sbjct: 454 PREVEEFLYTHPDILDAQVIGVPDTKYGEELMAWVRLKPG------RDDLTAEQLHEFAT 507
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +DGY + GRIKDM+IRGGENIYP+E+EEF+ THP++L+A GVPD + GEE+
Sbjct: 425 DIGVMDDDGYVTITGRIKDMVIRGGENIYPREVEEFLYTHPDILDAQVIGVPDTKYGEEL 484
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSK 484
++LK L A+ + F GK+++
Sbjct: 485 MAWVRLKPGRDDLTAEQLHEFATGKLAR 512
>gi|374705636|ref|ZP_09712506.1| AMP-binding domain protein [Pseudomonas sp. S9]
Length = 556
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 78/155 (50%), Gaps = 37/155 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++K++D IV G GEL RG+ MLGYW + Q + E I + W+ TG
Sbjct: 382 LESKIIDEQGAIVSRGQTGELCTRGYSVMLGYWNNPQASAEAIDTEGWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E GY ++VGR KDMIIRGGENIYP+
Sbjct: 434 -----------------------------DLAVMDEQGYVRIVGRSKDMIIRGGENIYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
EIEEF+ TH + + GVPD + GEE+ + IKL
Sbjct: 465 EIEEFLFTHAAIADVQVIGVPDSKYGEEIAVWIKL 499
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+EIEEF+ TH + + GVPD + GEE+
Sbjct: 434 DLAVMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLFTHAAIADVQVIGVPDSKYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ IKL + + + +R +CK ++ F
Sbjct: 494 AVWIKLHPGSGCDENQLREYCKANIAYF 521
>gi|421626707|ref|ZP_16067535.1| AMP-binding enzyme [Acinetobacter baumannii OIFC098]
gi|408695024|gb|EKL40583.1| AMP-binding enzyme [Acinetobacter baumannii OIFC098]
Length = 564
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +DG+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQDGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 508
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ DG+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDAAGWMHTGDIAEMDQ-----DGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 521
>gi|421674237|ref|ZP_16114169.1| AMP-binding enzyme [Acinetobacter baumannii OIFC065]
gi|421693149|ref|ZP_16132792.1| AMP-binding enzyme [Acinetobacter baumannii IS-116]
gi|404558298|gb|EKA63581.1| AMP-binding enzyme [Acinetobacter baumannii IS-116]
gi|410384467|gb|EKP36975.1| AMP-binding enzyme [Acinetobacter baumannii OIFC065]
Length = 564
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +DG+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQDGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 508
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ DG+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDAAGWMHTGDIAEMDQ-----DGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 521
>gi|389740966|gb|EIM82156.1| acetyl-CoA synthetase-like protein [Stereum hirsutum FP-91666 SS1]
Length = 640
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 88/172 (51%), Gaps = 32/172 (18%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AKVVD ++VP GTPGELL+ G+ GYW DE +T +
Sbjct: 449 VKAKVVDMEGQVVPVGTPGELLVAGYLVQKGYWGDEAQTNSVM----------------- 491
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
K P Q Y D+ ++ E+GY +VGRIKD+IIRGGEN++P
Sbjct: 492 --------KRDPEDDQ-------VYMHTGDEAIMDEEGYLSIVGRIKDIIIRGGENLFPV 536
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
+IE + +HP+++EA VP +GE VG I L++ AK+ E K + D
Sbjct: 537 QIENVLTSHPSIVEAAVVSVPHATLGEAVGAWIVLRDGAKMTKGEAKRVVWD 588
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 52/73 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ ++ E+GY +VGRIKD+IIRGGEN++P +IE + +HP+++EA VP +GE V
Sbjct: 506 DEAIMDEEGYLSIVGRIKDIIIRGGENLFPVQIENVLTSHPSIVEAAVVSVPHATLGEAV 565
Query: 458 GISIKLKENAKLN 470
G I L++ AK+
Sbjct: 566 GAWIVLRDGAKMT 578
>gi|390339625|ref|XP_798145.3| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 644
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 81/160 (50%), Gaps = 37/160 (23%)
Query: 27 NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRR 86
+ IV TPGEL IRG C M GY++D++KTKETI RWL +G
Sbjct: 472 TDEIVDVNTPGELCIRGPCVMSGYFDDDEKTKETIDHARWLHSG---------------- 515
Query: 87 KLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 146
D + EDGY +++ RIKDM+IRGGENI+P +IE +
Sbjct: 516 ---------------------DLASMDEDGYVEILSRIKDMVIRGGENIFPVQIEILLHK 554
Query: 147 HPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
HP + + GVPD RM EE+ +KLKE L E K+
Sbjct: 555 HPKIKDVQVIGVPDARMIEELCACVKLKEGETLTEDEIKN 594
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 61/95 (64%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
R + D + EDGY +++ RIKDM+IRGGENI+P +IE + HP + + GVPD
Sbjct: 509 ARWLHSGDLASMDEDGYVEILSRIKDMVIRGGENIFPVQIEILLHKHPKIKDVQVIGVPD 568
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
RM EE+ +KLKE L D+I+ FCKGK+S F
Sbjct: 569 ARMIEELCACVKLKEGETLTEDEIKNFCKGKISHF 603
>gi|421664806|ref|ZP_16104942.1| AMP-binding enzyme [Acinetobacter baumannii OIFC110]
gi|421694439|ref|ZP_16134061.1| AMP-binding enzyme [Acinetobacter baumannii WC-692]
gi|404567901|gb|EKA73014.1| AMP-binding enzyme [Acinetobacter baumannii WC-692]
gi|408711977|gb|EKL57169.1| AMP-binding enzyme [Acinetobacter baumannii OIFC110]
Length = 564
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +DG+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQDGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 508
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ DG+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDAAGWMHTGDIAEMDQ-----DGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 521
>gi|417544715|ref|ZP_12195801.1| AMP-binding enzyme [Acinetobacter baumannii OIFC032]
gi|421665621|ref|ZP_16105728.1| AMP-binding enzyme [Acinetobacter baumannii OIFC087]
gi|421671445|ref|ZP_16111418.1| AMP-binding enzyme [Acinetobacter baumannii OIFC099]
gi|400382603|gb|EJP41281.1| AMP-binding enzyme [Acinetobacter baumannii OIFC032]
gi|410382168|gb|EKP34723.1| AMP-binding enzyme [Acinetobacter baumannii OIFC099]
gi|410389887|gb|EKP42297.1| AMP-binding enzyme [Acinetobacter baumannii OIFC087]
Length = 564
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +DG+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQDGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 508
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ DG+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDAAGWMHTGDIAEMDQ-----DGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 521
>gi|260554162|ref|ZP_05826421.1| acyl-CoA synthetase/AMP-acid ligase II [Acinetobacter sp. RUH2624]
gi|424056019|ref|ZP_17793540.1| hypothetical protein W9I_02389 [Acinetobacter nosocomialis Ab22222]
gi|425741108|ref|ZP_18859266.1| AMP-binding enzyme [Acinetobacter baumannii WC-487]
gi|260404704|gb|EEW98215.1| acyl-CoA synthetase/AMP-acid ligase II [Acinetobacter sp. RUH2624]
gi|407441645|gb|EKF48149.1| hypothetical protein W9I_02389 [Acinetobacter nosocomialis Ab22222]
gi|425493594|gb|EKU59825.1| AMP-binding enzyme [Acinetobacter baumannii WC-487]
Length = 564
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +DG+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQDGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 508
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ DG+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDAAGWMHTGDIAEMDQ-----DGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 521
>gi|184157733|ref|YP_001846072.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ACICU]
gi|239503655|ref|ZP_04662965.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii AB900]
gi|260555401|ref|ZP_05827622.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|332876416|ref|ZP_08444185.1| AMP-binding enzyme [Acinetobacter baumannii 6014059]
gi|384142819|ref|YP_005525529.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii MDR-ZJ06]
gi|385237129|ref|YP_005798468.1| acyl-CoA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|387124310|ref|YP_006290192.1| acyl-CoA synthetase [Acinetobacter baumannii MDR-TJ]
gi|407932449|ref|YP_006848092.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii TYTH-1]
gi|416148012|ref|ZP_11602137.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii AB210]
gi|417547883|ref|ZP_12198965.1| AMP-binding enzyme [Acinetobacter baumannii Naval-18]
gi|417564311|ref|ZP_12215185.1| AMP-binding enzyme [Acinetobacter baumannii OIFC143]
gi|417568188|ref|ZP_12219051.1| AMP-binding enzyme [Acinetobacter baumannii OIFC189]
gi|417579032|ref|ZP_12229865.1| AMP-binding domain protein [Acinetobacter baumannii Naval-17]
gi|417869652|ref|ZP_12514635.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ABNIH1]
gi|417873111|ref|ZP_12517990.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ABNIH2]
gi|417878755|ref|ZP_12523356.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ABNIH3]
gi|417881601|ref|ZP_12525916.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ABNIH4]
gi|421204774|ref|ZP_15661891.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii AC12]
gi|421534889|ref|ZP_15981157.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii AC30]
gi|421627657|ref|ZP_16068462.1| AMP-binding enzyme [Acinetobacter baumannii OIFC180]
gi|421679272|ref|ZP_16119150.1| AMP-binding enzyme [Acinetobacter baumannii OIFC111]
gi|421687284|ref|ZP_16127013.1| AMP-binding enzyme [Acinetobacter baumannii IS-143]
gi|421703258|ref|ZP_16142724.1| acyl-CoA synthetase [Acinetobacter baumannii ZWS1122]
gi|421706981|ref|ZP_16146383.1| acyl-CoA synthetase [Acinetobacter baumannii ZWS1219]
gi|421791721|ref|ZP_16227892.1| AMP-binding enzyme [Acinetobacter baumannii Naval-2]
gi|424052743|ref|ZP_17790275.1| hypothetical protein W9G_01432 [Acinetobacter baumannii Ab11111]
gi|424064226|ref|ZP_17801711.1| hypothetical protein W9M_01509 [Acinetobacter baumannii Ab44444]
gi|425753305|ref|ZP_18871194.1| AMP-binding enzyme [Acinetobacter baumannii Naval-113]
gi|445471727|ref|ZP_21452264.1| AMP-binding enzyme [Acinetobacter baumannii OIFC338]
gi|445485098|ref|ZP_21456975.1| AMP-binding enzyme [Acinetobacter baumannii Naval-78]
gi|183209327|gb|ACC56725.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ACICU]
gi|193077047|gb|ABO11806.2| putative long chain fatty-acid CoA ligase [Acinetobacter baumannii
ATCC 17978]
gi|260411943|gb|EEX05240.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|323517626|gb|ADX92007.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii TCDC-AB0715]
gi|332735426|gb|EGJ66484.1| AMP-binding enzyme [Acinetobacter baumannii 6014059]
gi|333365280|gb|EGK47294.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii AB210]
gi|342229904|gb|EGT94752.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ABNIH1]
gi|342231671|gb|EGT96474.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ABNIH3]
gi|342232158|gb|EGT96941.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ABNIH2]
gi|342238788|gb|EGU03214.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ABNIH4]
gi|347593312|gb|AEP06033.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii MDR-ZJ06]
gi|385878802|gb|AFI95897.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii MDR-TJ]
gi|395554483|gb|EJG20485.1| AMP-binding enzyme [Acinetobacter baumannii OIFC189]
gi|395556067|gb|EJG22068.1| AMP-binding enzyme [Acinetobacter baumannii OIFC143]
gi|395568170|gb|EJG28844.1| AMP-binding domain protein [Acinetobacter baumannii Naval-17]
gi|398325762|gb|EJN41923.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii AC12]
gi|400389632|gb|EJP52703.1| AMP-binding enzyme [Acinetobacter baumannii Naval-18]
gi|404566131|gb|EKA71293.1| AMP-binding enzyme [Acinetobacter baumannii IS-143]
gi|404671088|gb|EKB38949.1| hypothetical protein W9G_01432 [Acinetobacter baumannii Ab11111]
gi|404673320|gb|EKB41112.1| hypothetical protein W9M_01509 [Acinetobacter baumannii Ab44444]
gi|407192751|gb|EKE63927.1| acyl-CoA synthetase [Acinetobacter baumannii ZWS1122]
gi|407193115|gb|EKE64286.1| acyl-CoA synthetase [Acinetobacter baumannii ZWS1219]
gi|407901030|gb|AFU37861.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii TYTH-1]
gi|408711043|gb|EKL56262.1| AMP-binding enzyme [Acinetobacter baumannii OIFC180]
gi|409987226|gb|EKO43411.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii AC30]
gi|410391504|gb|EKP43872.1| AMP-binding enzyme [Acinetobacter baumannii OIFC111]
gi|410402412|gb|EKP54530.1| AMP-binding enzyme [Acinetobacter baumannii Naval-2]
gi|425498275|gb|EKU64359.1| AMP-binding enzyme [Acinetobacter baumannii Naval-113]
gi|444767322|gb|ELW91574.1| AMP-binding enzyme [Acinetobacter baumannii Naval-78]
gi|444770987|gb|ELW95123.1| AMP-binding enzyme [Acinetobacter baumannii OIFC338]
gi|452953582|gb|EME59001.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii MSP4-16]
Length = 564
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +DG+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQDGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 508
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ DG+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDAAGWMHTGDIAEMDQ-----DGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 521
>gi|424060277|ref|ZP_17797768.1| hypothetical protein W9K_01391 [Acinetobacter baumannii Ab33333]
gi|404668229|gb|EKB36138.1| hypothetical protein W9K_01391 [Acinetobacter baumannii Ab33333]
Length = 564
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +DG+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQDGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 508
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ DG+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDAAGWMHTGDIAEMDQ-----DGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 521
>gi|348562585|ref|XP_003467090.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Cavia porcellus]
Length = 618
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 87/170 (51%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ ++V TPGEL IRG+C M GYW + +KT E +G D+W RTG
Sbjct: 444 EAQIVNVETGQLVALNTPGELCIRGYCVMQGYWAEPEKTFEAVGQDKWYRTG-------- 495
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + ++G+ ++VGR KDMIIRGGENIYP
Sbjct: 496 -----------------------------DIATMDKEGFCKIVGRSKDMIIRGGENIYPA 526
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F THP V E GV D RMGEE+ I+LK + E K+
Sbjct: 527 ELEDFFHTHPQVQEVQVVGVKDPRMGEEICACIRLKSGETITEEEIKAFC 576
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D RMGEE+
Sbjct: 496 DIATMDKEGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDPRMGEEI 555
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK + ++I+ FCKGK+S F
Sbjct: 556 CACIRLKSGETITEEEIKAFCKGKISHF 583
>gi|384131820|ref|YP_005514432.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii 1656-2]
gi|322508040|gb|ADX03494.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii 1656-2]
Length = 564
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 37/159 (23%)
Query: 22 KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSA 81
K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 387 KIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG----------- 435
Query: 82 MAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIE 141
D + +DG+ ++ GRIKD++IRGGEN++PKEIE
Sbjct: 436 --------------------------DIAEMDQDGFIKIKGRIKDVVIRGGENLFPKEIE 469
Query: 142 EFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 470 DFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 508
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ DG+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDAAGWMHTGDIAEMDQ-----DGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 521
>gi|126641424|ref|YP_001084408.1| long chain fatty-acid CoA ligase [Acinetobacter baumannii ATCC
17978]
Length = 482
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 303 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 353
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +DG+ ++ GRIKD++IRGGEN++PKE
Sbjct: 354 ----------------------------DIAEMDQDGFIKIKGRIKDVVIRGGENLFPKE 385
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 386 IEDFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 426
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ DG+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 337 EEKTREVIDAAGWMHTGDIAEMDQ-----DGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 391
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 392 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 439
>gi|445490901|ref|ZP_21459385.1| AMP-binding enzyme [Acinetobacter baumannii AA-014]
gi|444764999|gb|ELW89303.1| AMP-binding enzyme [Acinetobacter baumannii AA-014]
Length = 564
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +DG+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQDGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 508
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ DG+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDAAGWMHTGDIAEMDQ-----DGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 521
>gi|346470349|gb|AEO35019.1| hypothetical protein [Amblyomma maculatum]
Length = 587
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 90/179 (50%), Gaps = 40/179 (22%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P D Q +T+ + K+VD R VP +PGE+ RG LGY+ D++KT+E +
Sbjct: 394 DPIDKQLNTVGRPLPHLEVKIVDPSTGREVPVNSPGEVWGRGPNVFLGYYNDDRKTREVM 453
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
PD W +TG D V+ EDGY +V
Sbjct: 454 TPDGWYKTG-------------------------------------DVGVMDEDGYVIIV 476
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
R+KD++ RGGE +YP E+EEF THP V E + GVPDER+GEEV I + +AK+
Sbjct: 477 SRLKDVVNRGGEKVYPTEVEEFFHTHPAVQECHVIGVPDERLGEEVCAWIVPRADAKVT 535
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 379 REEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHP 438
R+ + PD ++ D V+ EDGY +V R+KD++ RGGE +YP E+EEF THP
Sbjct: 447 RKTREVMTPDGWYKT---GDVGVMDEDGYVIIVSRLKDVVNRGGEKVYPTEVEEFFHTHP 503
Query: 439 NVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
V E + GVPDER+GEEV I + +AK+ +++R C+GK+S F
Sbjct: 504 AVQECHVIGVPDERLGEEVCAWIVPRADAKVTDEELREHCQGKLSHF 550
>gi|169796332|ref|YP_001714125.1| AMP-dependent synthetase and ligase [Acinetobacter baumannii AYE]
gi|213156932|ref|YP_002318977.1| long-chain fatty acid CoA ligase (AMP-binding) [Acinetobacter
baumannii AB0057]
gi|215483793|ref|YP_002326018.1| AMP-binding enzyme family protein [Acinetobacter baumannii
AB307-0294]
gi|301347075|ref|ZP_07227816.1| AMP-binding enzyme family protein [Acinetobacter baumannii AB056]
gi|301511211|ref|ZP_07236448.1| AMP-binding enzyme family protein [Acinetobacter baumannii AB058]
gi|301595037|ref|ZP_07240045.1| AMP-binding enzyme family protein [Acinetobacter baumannii AB059]
gi|332852012|ref|ZP_08433879.1| AMP-binding enzyme [Acinetobacter baumannii 6013150]
gi|332871765|ref|ZP_08440205.1| AMP-binding enzyme [Acinetobacter baumannii 6013113]
gi|417572810|ref|ZP_12223664.1| AMP-binding enzyme [Acinetobacter baumannii Canada BC-5]
gi|421623504|ref|ZP_16064388.1| AMP-binding enzyme [Acinetobacter baumannii OIFC074]
gi|421645343|ref|ZP_16085811.1| AMP-binding enzyme [Acinetobacter baumannii IS-235]
gi|421645501|ref|ZP_16085966.1| AMP-binding enzyme [Acinetobacter baumannii IS-251]
gi|421660634|ref|ZP_16100823.1| AMP-binding enzyme [Acinetobacter baumannii Naval-83]
gi|421701018|ref|ZP_16140528.1| AMP-binding enzyme [Acinetobacter baumannii IS-58]
gi|421797628|ref|ZP_16233669.1| AMP-binding enzyme [Acinetobacter baumannii Naval-21]
gi|421799823|ref|ZP_16235813.1| AMP-binding enzyme [Acinetobacter baumannii Canada BC1]
gi|169149259|emb|CAM87142.1| conserved hypothetical protein; putative AMP-dependent synthetase
and ligase [Acinetobacter baumannii AYE]
gi|213056092|gb|ACJ40994.1| long-chain fatty-acid-CoA ligase [Acinetobacter baumannii AB0057]
gi|213988634|gb|ACJ58933.1| AMP-binding enzyme family protein [Acinetobacter baumannii
AB307-0294]
gi|332729589|gb|EGJ60927.1| AMP-binding enzyme [Acinetobacter baumannii 6013150]
gi|332731235|gb|EGJ62533.1| AMP-binding enzyme [Acinetobacter baumannii 6013113]
gi|400208378|gb|EJO39348.1| AMP-binding enzyme [Acinetobacter baumannii Canada BC-5]
gi|404568616|gb|EKA73714.1| AMP-binding enzyme [Acinetobacter baumannii IS-58]
gi|408503184|gb|EKK04960.1| AMP-binding enzyme [Acinetobacter baumannii IS-235]
gi|408518373|gb|EKK19898.1| AMP-binding enzyme [Acinetobacter baumannii IS-251]
gi|408692854|gb|EKL38467.1| AMP-binding enzyme [Acinetobacter baumannii OIFC074]
gi|408704129|gb|EKL49503.1| AMP-binding enzyme [Acinetobacter baumannii Naval-83]
gi|410396557|gb|EKP48824.1| AMP-binding enzyme [Acinetobacter baumannii Naval-21]
gi|410409364|gb|EKP61297.1| AMP-binding enzyme [Acinetobacter baumannii Canada BC1]
Length = 564
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDTAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +DG+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQDGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 508
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ DG+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDTAGWMHTGDIAEMDQ-----DGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 521
>gi|386382177|ref|ZP_10067822.1| AMP-binding domain protein [Streptomyces tsukubaensis NRRL18488]
gi|385670360|gb|EIF93458.1| AMP-binding domain protein [Streptomyces tsukubaensis NRRL18488]
Length = 551
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 82/160 (51%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + + +P G GEL RG+ MLGYW + ++T E I RW+ TG
Sbjct: 378 IEVKIVDPVSGVTLPRGEAGELCTRGYSVMLGYWGEPERTAEVIDSGRWMHTG------- 430
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+R DG+ Q+VGRIKDMIIRGGEN+YP
Sbjct: 431 ------------------------------DLAVMRPDGFVQIVGRIKDMIIRGGENVYP 460
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+E+EEF+ HP + + GVPD R GEEV + ++ A
Sbjct: 461 REVEEFLHRHPQIADVQVVGVPDPRYGEEVLACVVPRDPA 500
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Query: 381 EENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
E V DS GR + D V+R DG+ Q+VGRIKDMIIRGGEN+YP+E+EEF+ HP +
Sbjct: 415 ERTAEVIDS-GRWMHTGDLAVMRPDGFVQIVGRIKDMIIRGGENVYPREVEEFLHRHPQI 473
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
+ GVPD R GEEV + ++ A D + FC +++ +
Sbjct: 474 ADVQVVGVPDPRYGEEVLACVVPRDPADPPTLDTVTAFCDQRLAHY 519
>gi|377559730|ref|ZP_09789269.1| putative fatty-acid--CoA ligase [Gordonia otitidis NBRC 100426]
gi|377523126|dbj|GAB34434.1| putative fatty-acid--CoA ligase [Gordonia otitidis NBRC 100426]
Length = 562
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 100/196 (51%), Gaps = 33/196 (16%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + KVVD + +P G GE RG+ M GYW + KT E +
Sbjct: 354 DPLELRVGTVGRVGPHLEIKVVDPISGETLPRGETGEFCTRGYSVMSGYWNEPVKTAEAL 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ TG +A+ G S V+D GY ++
Sbjct: 414 DADGWMHTGD----------LAV----------MDAGSGASGSNVTDAG--SGAGYVRIT 451
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN-AKLN 180
GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDER GEE+ I+L++ A L
Sbjct: 452 GRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDERYGEELMAWIQLRDGVADLT 511
Query: 181 AYEDKSISSDYHEFET 196
A D EF T
Sbjct: 512 A-------DDVREFAT 520
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Query: 406 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
GY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDER GEE+ I+L++
Sbjct: 446 GYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDERYGEELMAWIQLRD 505
Query: 466 N-AKLNADDIRTFCKGKVSK 484
A L ADD+R F GK+++
Sbjct: 506 GVADLTADDVREFATGKIAR 525
>gi|357589271|ref|ZP_09127937.1| AMP-binding domain protein [Corynebacterium nuruki S6-4]
Length = 569
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 82/160 (51%), Gaps = 37/160 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD + V G GELL+RG+ M GYW+ +KT E + D W+ TG
Sbjct: 385 IEVKIVDRDGDAVARGVQGELLVRGYSVMQGYWDMPEKTAEAVDADGWMHTG-------- 436
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + +DGY Q+ GRIKDM+IRGGENIYP+
Sbjct: 437 -----------------------------DLGQMDDDGYVQITGRIKDMVIRGGENIYPR 467
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
E+EEF+ HP+V + GVPDE+ GEE+ I L + A+
Sbjct: 468 EVEEFLYEHPDVADVQVIGVPDEKYGEELMAWIILSDEAR 507
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 5/89 (5%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ +DGY Q+ GRIKDM+IRGGENIYP+E+EEF+ HP+V + GVPDE+ GEE+ I
Sbjct: 441 MDDDGYVQITGRIKDMVIRGGENIYPREVEEFLYEHPDVADVQVIGVPDEKYGEELMAWI 500
Query: 462 KLKENAK-----LNADDIRTFCKGKVSKF 485
L + A+ L A D+R FC GK+++F
Sbjct: 501 ILSDEAREAGRTLTAGDVRGFCDGKLARF 529
>gi|229492698|ref|ZP_04386499.1| acyl-CoA synthetase family member 2 [Rhodococcus erythropolis
SK121]
gi|229320357|gb|EEN86177.1| acyl-CoA synthetase family member 2 [Rhodococcus erythropolis
SK121]
Length = 542
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 80/144 (55%), Gaps = 37/144 (25%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL IRG+ MLGYW + +KT I D W+ +G
Sbjct: 382 GQSGELCIRGYSVMLGYWNEPEKTAGAIDADGWIHSG----------------------- 418
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D ++ EDG+ ++ GRIKDM+IRGGENIYP+EIEEF+ THP++++A
Sbjct: 419 --------------DLAMMDEDGFVEITGRIKDMVIRGGENIYPREIEEFLYTHPDIVDA 464
Query: 154 YAYGVPDERMGEEVGISIKLKENA 177
GVPD++ GEE+ + ++L+E A
Sbjct: 465 QIVGVPDDKYGEELMVWLRLREGA 488
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
I D ++ EDG+ ++ GRIKDM+IRGGENIYP+EIEEF+ THP++++A GVPD++
Sbjct: 415 IHSGDLAMMDEDGFVEITGRIKDMVIRGGENIYPREIEEFLYTHPDIVDAQIVGVPDDKY 474
Query: 454 GEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
GEE+ + ++L+E A ++AD IR FC GK++ +
Sbjct: 475 GEELMVWLRLREGAHPIDADGIRAFCTGKLAHY 507
>gi|239831428|ref|ZP_04679757.1| AMP-dependent synthetase and ligase [Ochrobactrum intermedium LMG
3301]
gi|239823695|gb|EEQ95263.1| AMP-dependent synthetase and ligase [Ochrobactrum intermedium LMG
3301]
Length = 571
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 90/178 (50%), Gaps = 39/178 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + ST+ + K+VD + ++VP G GELL RG+ M GYW D + + I
Sbjct: 375 DPLERRVSTVGRIHPHLEVKIVDADGKVVPRGEKGELLTRGYSVMRGYWNDAESSAGAID 434
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ TG D + E+GY +VG
Sbjct: 435 DAGWMHTG-------------------------------------DLATIDEEGYCNIVG 457
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
RIKD+IIRGGENIYP+EIEEF+ HP + + +G+PD + GE + +KL ++A+L+
Sbjct: 458 RIKDLIIRGGENIYPREIEEFLFAHPAISDVQIFGIPDRKFGEIICAWVKLHKDAQLS 515
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY +VGRIKD+IIRGGENIYP+EIEEF+ HP + + +G+PD + GE +
Sbjct: 443 DLATIDEEGYCNIVGRIKDLIIRGGENIYPREIEEFLFAHPAISDVQIFGIPDRKFGEII 502
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+KL ++A+L+ +D+ +C+ +++ +
Sbjct: 503 CAWVKLHKDAQLSEEDLSEYCRQRIAHY 530
>gi|444309582|ref|ZP_21145217.1| AMP-dependent synthetase and ligase [Ochrobactrum intermedium M86]
gi|443487034|gb|ELT49801.1| AMP-dependent synthetase and ligase [Ochrobactrum intermedium M86]
Length = 504
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 90/178 (50%), Gaps = 39/178 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + ST+ + K+VD + ++VP G GELL RG+ M GYW D + + I
Sbjct: 308 DPLERRVSTVGRIHPHLEVKIVDADGKVVPRGEKGELLTRGYSVMRGYWNDAESSAGAID 367
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ TG D + E+GY +VG
Sbjct: 368 DAGWMHTG-------------------------------------DLATIDEEGYCNIVG 390
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
RIKD+IIRGGENIYP+EIEEF+ HP + + +G+PD + GE + +KL ++A+L+
Sbjct: 391 RIKDLIIRGGENIYPREIEEFLFAHPAISDVQIFGIPDRKFGEIICAWVKLHKDAQLS 448
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY +VGRIKD+IIRGGENIYP+EIEEF+ HP + + +G+PD + GE +
Sbjct: 376 DLATIDEEGYCNIVGRIKDLIIRGGENIYPREIEEFLFAHPAISDVQIFGIPDRKFGEII 435
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+KL ++A+L+ +D+ +C+ +++ +
Sbjct: 436 CAWVKLHKDAQLSEEDLSEYCRQRIAHY 463
>gi|377568916|ref|ZP_09798091.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
gi|377533823|dbj|GAB43256.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
Length = 547
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 96/195 (49%), Gaps = 46/195 (23%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ +T+ + K+VD G GEL RG+ M GYW + +KT E I
Sbjct: 353 DPLELRVTTVGRVGPHLEIKIVDPGTGETSGRGVTGELCTRGYSVMTGYWNEPEKTAEAI 412
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ TG D + ++GY ++
Sbjct: 413 DADGWMHTG-------------------------------------DLADMDDNGYVRIT 435
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+ ++L++ A
Sbjct: 436 GRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWVRLRDTAT--- 492
Query: 182 YEDKSISSDYHEFET 196
+ + D EF T
Sbjct: 493 ---EFTADDLREFAT 504
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ ++GY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+ +
Sbjct: 426 MDDNGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWV 485
Query: 462 KLKENA-KLNADDIRTFCKGKVSK 484
+L++ A + ADD+R F GK+++
Sbjct: 486 RLRDTATEFTADDLREFATGKIAR 509
>gi|404320688|ref|ZP_10968621.1| AMP-dependent synthetase and ligase [Ochrobactrum anthropi CTS-325]
Length = 562
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 91/181 (50%), Gaps = 39/181 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + ST+ + K+VD + ++VP G GELL RG+ M GYW D + + I
Sbjct: 366 DPLERRVSTVGRIHPHLEVKIVDADGKVVPRGEKGELLTRGYSVMRGYWNDAESSAGAID 425
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ TG D + E+GY +VG
Sbjct: 426 DAGWMHTG-------------------------------------DLATIDEEGYCNIVG 448
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
RIKD+IIRGGENIYP+EIEEF+ THP + + +G+PD + GE + +KL ++ +L+
Sbjct: 449 RIKDLIIRGGENIYPREIEEFLFTHPAISDVQIFGIPDRKFGEIICAWVKLHKDGELSEE 508
Query: 183 E 183
E
Sbjct: 509 E 509
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY +VGRIKD+IIRGGENIYP+EIEEF+ THP + + +G+PD + GE +
Sbjct: 434 DLATIDEEGYCNIVGRIKDLIIRGGENIYPREIEEFLFTHPAISDVQIFGIPDRKFGEII 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+KL ++ +L+ +++ +C+ +++ +
Sbjct: 494 CAWVKLHKDGELSEEELIEYCRQRIAHY 521
>gi|427783845|gb|JAA57374.1| Putative acyl-coa synthetase family member 2 [Rhipicephalus
pulchellus]
Length = 594
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 77/148 (52%), Gaps = 37/148 (25%)
Query: 36 PGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQ 95
PGE+ +RGH +GY+ DE+KTKE GP W +TG K
Sbjct: 437 PGEVWVRGHNVFIGYYNDEEKTKEVKGPAGWYKTGDLGK--------------------- 475
Query: 96 QQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYA 155
+ EDGY ++GR+KDM+IRGGENIYP EIEE ++THP + E +
Sbjct: 476 ----------------MDEDGYLSIIGRLKDMVIRGGENIYPLEIEEVLETHPAIQECHV 519
Query: 156 YGVPDERMGEEVGISIKLKENAKLNAYE 183
GVPD RMGEE+ + L +K+ E
Sbjct: 520 IGVPDSRMGEELCAWVLLNPGSKVTDSE 547
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 61/84 (72%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ EDGY ++GR+KDM+IRGGENIYP EIEE ++THP + E + GVPD RMGEE+ +
Sbjct: 476 MDEDGYLSIIGRLKDMVIRGGENIYPLEIEEVLETHPAIQECHVIGVPDSRMGEELCAWV 535
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
L +K+ +++ +CKGK+S F
Sbjct: 536 LLNPGSKVTDSELQQYCKGKLSHF 559
>gi|117920918|ref|YP_870110.1| AMP-binding protein [Shewanella sp. ANA-3]
gi|117613250|gb|ABK48704.1| succinate dehydrogenase, cytochrome b subunit [Shewanella sp.
ANA-3]
Length = 574
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 83/161 (51%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD ++P TPGE+ RG+C M YW D +KT TI + WL +G
Sbjct: 397 EVKIVDEFGEVLPINTPGEVCSRGYCIMQCYWNDPEKTAATIDSEGWLHSG--------- 447
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + E GY Q+VGRIKDMIIRGGENIYP+E
Sbjct: 448 ----------------------------DIGQMDEQGYVQIVGRIKDMIIRGGENIYPRE 479
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + TH +V +A +GV ++ GEEV IK++ A ++
Sbjct: 480 IEEKLYTHKDVQDAAVFGVHSDKYGEEVCAWIKIRSGATIS 520
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 59/84 (70%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ E GY Q+VGRIKDMIIRGGENIYP+EIEE + TH +V +A +GV ++ GEEV I
Sbjct: 452 MDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVHSDKYGEEVCAWI 511
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
K++ A ++ +DIR F K + F
Sbjct: 512 KIRSGATISEEDIRHFLTEKFAYF 535
>gi|374571689|ref|ZP_09644785.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM471]
gi|374420010|gb|EHQ99542.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM471]
Length = 564
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 92/186 (49%), Gaps = 39/186 (20%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + ST+ + KVVD + +IV G GEL RG+ MLGYWE+ +KT + +
Sbjct: 368 DPLDRRVSTVGRIHPHVEVKVVDLDGKIVKRGERGELCTRGYSVMLGYWEEAEKTADVLD 427
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
+ W+ TG D ++ + GY +VG
Sbjct: 428 ANGWMHTG-------------------------------------DIAIIDDQGYCNIVG 450
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
RIKDM+IRGGEN+YP+EIEEF+ HP + + +GV D R GEE+ I+++ L
Sbjct: 451 RIKDMVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADTRYGEELCAWIRVRSGETLTME 510
Query: 183 EDKSIS 188
E ++
Sbjct: 511 EVRAFC 516
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 59/86 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ + GY +VGRIKDM+IRGGEN+YP+EIEEF+ HP + + +GV D R GEE+
Sbjct: 436 DIAIIDDQGYCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADTRYGEEL 495
Query: 458 GISIKLKENAKLNADDIRTFCKGKVS 483
I+++ L +++R FC G+++
Sbjct: 496 CAWIRVRSGETLTMEEVRAFCDGQIA 521
>gi|397780243|ref|YP_006544716.1| AMP-dependent synthetase/ligase [Methanoculleus bourgensis MS2]
gi|396938745|emb|CCJ36000.1| AMP-dependent synthetase/ligase [Methanoculleus bourgensis MS2]
Length = 566
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 92/179 (51%), Gaps = 40/179 (22%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ ST+ + K+VD N RIVP G GE+ RG+C M Y+ + T+ TI
Sbjct: 366 DPLELRVSTVGRPFPHTEIKIVDPNTKRIVPRGETGEICARGYCVMRCYYNNPNATRATI 425
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ W TG D V+ E+ Y ++V
Sbjct: 426 DENGWNHTG-------------------------------------DLGVMDEEDYVKIV 448
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
GR+KDM+IRGGENIYP+EIEEF+ HP + +AY GVPD++ GEE+ IK + A+L
Sbjct: 449 GRLKDMVIRGGENIYPREIEEFLHNHPKIADAYVIGVPDKKYGEELMAWIKTENGAELT 507
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 64/88 (72%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+ Y ++VGR+KDM+IRGGENIYP+EIEEF+ HP + +AY GVPD++ GEE+
Sbjct: 435 DLGVMDEEDYVKIVGRLKDMVIRGGENIYPREIEEFLHNHPKIADAYVIGVPDKKYGEEL 494
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK + A+L ++ FC+G+++ F
Sbjct: 495 MAWIKTENGAELTEAAVKEFCRGRIAHF 522
>gi|134294240|ref|YP_001117975.1| AMP-binding domain-containing protein [Burkholderia vietnamiensis
G4]
gi|134137397|gb|ABO53140.1| AMP-dependent synthetase and ligase [Burkholderia vietnamiensis G4]
Length = 575
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 81/162 (50%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD IVP G GEL +G+ MLGYW+D+ KT+E + D W+ TG
Sbjct: 396 LEVKIVDPGGDIVPVGATGELCTKGYSVMLGYWDDDAKTREVL-IDGWMHTG-------- 446
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L GY +VGR+KDM+IRGGEN+YP+
Sbjct: 447 -----------------------------DLATLDGQGYCNIVGRLKDMVIRGGENVYPR 477
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + A +G+PD + GEE+ I L+ ++
Sbjct: 478 EIEEFLFRHPKIQSAQVFGLPDAKYGEELCAWIVLRAGEQMT 519
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L GY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + A +G+PD + GEE+
Sbjct: 447 DLATLDGQGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGLPDAKYGEEL 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ ++ DD+R FC+G+++ +
Sbjct: 507 CAWIVLRAGEQMTDDDVRAFCQGQIAHY 534
>gi|387900866|ref|YP_006331205.1| long-chain-fatty-acid--CoA ligase [Burkholderia sp. KJ006]
gi|387575758|gb|AFJ84474.1| Long-chain-fatty-acid--CoA ligase [Burkholderia sp. KJ006]
Length = 575
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 81/162 (50%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD IVP G GEL +G+ MLGYW+D+ KT+E + D W+ TG
Sbjct: 396 LEVKIVDPGGDIVPVGATGELCTKGYSVMLGYWDDDAKTREVL-IDGWMHTG-------- 446
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L GY +VGR+KDM+IRGGEN+YP+
Sbjct: 447 -----------------------------DLATLDGQGYCNIVGRLKDMVIRGGENVYPR 477
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + A +G+PD + GEE+ I L+ ++
Sbjct: 478 EIEEFLFRHPKIQSAQVFGLPDAKYGEELCAWIVLRAGEQMT 519
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L GY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + A +G+PD + GEE+
Sbjct: 447 DLATLDGQGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGLPDAKYGEEL 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ ++ DD+R FC+G+++ +
Sbjct: 507 CAWIVLRAGEQMTEDDVRAFCQGQIAHY 534
>gi|119718156|ref|YP_925121.1| AMP-binding domain-containing protein [Nocardioides sp. JS614]
gi|119538817|gb|ABL83434.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
Length = 539
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 82/161 (50%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + V G GE RG+ MLGYW+D +KT E + D W+ TG
Sbjct: 361 VEIKIVDPVSGETVERGRTGEFCTRGYSVMLGYWDDPEKTAEAVDADGWMHTG------- 413
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D +REDGY +VGRI DM+IRGGENIYP
Sbjct: 414 ------------------------------DLAEMREDGYCNIVGRITDMVIRGGENIYP 443
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ HP++ + GVPDER GEE+ ++++ A+
Sbjct: 444 REIEEFLYQHPDIEDVQVIGVPDERYGEELCAWVRMRAGAE 484
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+REDGY +VGRI DM+IRGGENIYP+EIEEF+ HP++ + GVPDER GEE+ +
Sbjct: 418 MREDGYCNIVGRITDMVIRGGENIYPREIEEFLYQHPDIEDVQVIGVPDERYGEELCAWV 477
Query: 462 KLKENAK-LNADDIRTFCKGKVSKF 485
+++ A+ L+AD +R F G++S +
Sbjct: 478 RMRAGAEPLDADAVRAFATGRLSHY 502
>gi|113970620|ref|YP_734413.1| AMP-binding domain protein [Shewanella sp. MR-4]
gi|113885304|gb|ABI39356.1| AMP-dependent synthetase and ligase [Shewanella sp. MR-4]
Length = 570
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 83/161 (51%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD ++P TPGE+ RG+C M YW D +KT TI + WL +G
Sbjct: 393 EVKIVDEFGEVLPINTPGEVCSRGYCIMQCYWNDPEKTAATIDSEGWLHSG--------- 443
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + E GY Q+VGRIKDMIIRGGENIYP+E
Sbjct: 444 ----------------------------DIGQMDEQGYVQIVGRIKDMIIRGGENIYPRE 475
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + TH +V +A +GV ++ GEEV IK++ A ++
Sbjct: 476 IEEKLYTHKDVQDAAVFGVHSDKYGEEVCAWIKIRSGATIS 516
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 59/84 (70%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ E GY Q+VGRIKDMIIRGGENIYP+EIEE + TH +V +A +GV ++ GEEV I
Sbjct: 448 MDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVHSDKYGEEVCAWI 507
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
K++ A ++ +DIR F K + F
Sbjct: 508 KIRSGATISEEDIRHFLTEKFAYF 531
>gi|317123519|ref|YP_004097631.1| AMP-dependent synthetase and ligase [Intrasporangium calvum DSM
43043]
gi|315587607|gb|ADU46904.1| AMP-dependent synthetase and ligase [Intrasporangium calvum DSM
43043]
Length = 543
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 84/161 (52%), Gaps = 39/161 (24%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD V G GE L +G+ MLGYWE KT E I D W+ TG
Sbjct: 367 LEIKIVDPGTGETVRRGQAGEFLTKGYSVMLGYWEQPDKTAEAI-EDGWMHTG------- 418
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ +DGY ++ GRIKDM+IRGGEN+YP
Sbjct: 419 ------------------------------DLGVMHDDGYVEITGRIKDMVIRGGENVYP 448
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++L+A GVPD + GEE+ ++++E A+
Sbjct: 449 REIEEFLYTHPDILDAQVIGVPDSKYGEELCAWVRMREGAE 489
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +DGY ++ GRIKDM+IRGGEN+YP+EIEEF+ THP++L+A GVPD + GEE+
Sbjct: 419 DLGVMHDDGYVEITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDSKYGEEL 478
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSKF 485
++++E A+ L A+ +R FC G+++ +
Sbjct: 479 CAWVRMREGAEPLTAEALREFCTGQLAHY 507
>gi|433773982|ref|YP_007304449.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mesorhizobium
australicum WSM2073]
gi|433665997|gb|AGB45073.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mesorhizobium
australicum WSM2073]
Length = 590
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 89/187 (47%), Gaps = 39/187 (20%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + ST+ + K + + V G PGEL RG+ M GYW+D++KT+E I
Sbjct: 394 DPLEKRVSTVGRIHPHVEVKAIAVDGATVAVGAPGELCTRGYSVMKGYWDDDEKTREAID 453
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + +GY +VG
Sbjct: 454 SDGWMHTG-------------------------------------DLATIDAEGYCNIVG 476
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGEN+YP+E+EEF+ HP V E +G+PD + GEE+ I LK
Sbjct: 477 RVKDMLIRGGENVYPREVEEFLYRHPKVREVQVFGIPDAKYGEELCAWIVLKPGQVATEQ 536
Query: 183 EDKSISS 189
E K+ +
Sbjct: 537 EIKAFCA 543
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGR+KDM+IRGGEN+YP+E+EEF+ HP V E +G+PD + GEE+
Sbjct: 462 DLATIDAEGYCNIVGRVKDMLIRGGENVYPREVEEFLYRHPKVREVQVFGIPDAKYGEEL 521
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I LK +I+ FC G+++ +
Sbjct: 522 CAWIVLKPGQVATEQEIKAFCAGQIAHY 549
>gi|386399261|ref|ZP_10084039.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM1253]
gi|385739887|gb|EIG60083.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM1253]
Length = 564
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 92/186 (49%), Gaps = 39/186 (20%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + ST+ + KVVD + +IV G GEL RG+ MLGYWE+ +KT + +
Sbjct: 368 DPLDRRVSTVGRIHPHVEVKVVDLDGKIVKRGERGELCTRGYSVMLGYWEEPEKTADVLD 427
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
+ W+ TG D ++ + GY +VG
Sbjct: 428 ANGWMHTG-------------------------------------DIAIIDDQGYCNIVG 450
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
RIKDM+IRGGEN+YP+EIEEF+ HP + + +GV D R GEE+ I+++ L
Sbjct: 451 RIKDMVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADTRYGEELCAWIRVRSGETLTME 510
Query: 183 EDKSIS 188
E ++
Sbjct: 511 EVRAFC 516
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 59/86 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ + GY +VGRIKDM+IRGGEN+YP+EIEEF+ HP + + +GV D R GEE+
Sbjct: 436 DIAIIDDQGYCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADTRYGEEL 495
Query: 458 GISIKLKENAKLNADDIRTFCKGKVS 483
I+++ L +++R FC G+++
Sbjct: 496 CAWIRVRSGETLTMEEVRAFCDGQIA 521
>gi|398812778|ref|ZP_10571492.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Variovorax
sp. CF313]
gi|398076492|gb|EJL67552.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Variovorax
sp. CF313]
Length = 564
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 87/179 (48%), Gaps = 40/179 (22%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P + + ST+ + KV+D + I+P G GEL RG+ M GYW D KT E I
Sbjct: 367 TPLEKRVSTIGKVLPHLELKVIDPISGEILPAGKVGELCTRGYSVMRGYWADAAKTAEAI 426
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ +G D V+ EDGY +
Sbjct: 427 DADAWMHSG-------------------------------------DLAVIDEDGYVNIA 449
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
GRIKDM+IRGGEN+YP+EIEEF+ HP + + GVPD++ GEE+ + L+ A L+
Sbjct: 450 GRIKDMVIRGGENVYPREIEEFLYRHPAIQDVQVIGVPDQKYGEELCAWVVLRNGASLS 508
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDGY + GRIKDM+IRGGEN+YP+EIEEF+ HP + + GVPD++ GEE+
Sbjct: 436 DLAVIDEDGYVNIAGRIKDMVIRGGENVYPREIEEFLYRHPAIQDVQVIGVPDQKYGEEL 495
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ L+ A L+ +D+R FC+G+++ F
Sbjct: 496 CAWVVLRNGASLSEEDLRAFCQGQIAHF 523
>gi|114047851|ref|YP_738401.1| AMP-binding domain protein [Shewanella sp. MR-7]
gi|113889293|gb|ABI43344.1| AMP-dependent synthetase and ligase [Shewanella sp. MR-7]
Length = 570
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 83/161 (51%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD ++P TPGE+ RG+C M YW D +KT TI + WL +G
Sbjct: 393 EVKIVDEFGEVLPINTPGEVCSRGYCIMQCYWNDPEKTAATIDSEGWLHSG--------- 443
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + E GY Q+VGRIKDMIIRGGENIYP+E
Sbjct: 444 ----------------------------DIGQMDEQGYVQIVGRIKDMIIRGGENIYPRE 475
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + TH +V +A +GV ++ GEEV IK++ A ++
Sbjct: 476 IEEKLYTHKDVQDAAVFGVHSDKYGEEVCAWIKVRSGATIS 516
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 59/84 (70%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ E GY Q+VGRIKDMIIRGGENIYP+EIEE + TH +V +A +GV ++ GEEV I
Sbjct: 448 MDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVHSDKYGEEVCAWI 507
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
K++ A ++ +DIR F K + F
Sbjct: 508 KVRSGATISEEDIRHFLTEKFAYF 531
>gi|319653022|ref|ZP_08007127.1| acyl-CoA synthase [Bacillus sp. 2_A_57_CT2]
gi|317395371|gb|EFV76104.1| acyl-CoA synthase [Bacillus sp. 2_A_57_CT2]
Length = 550
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 93/179 (51%), Gaps = 40/179 (22%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ ++ + + + K+V+ N VP G GEL RG+ M GY+++ TKE I
Sbjct: 354 DPIELRVESVGRALPNVEVKIVEPGTNNEVPTGEQGELCTRGYHVMKGYYKNPDATKEAI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ WL TG D V+ E+GY ++
Sbjct: 414 DKEGWLHTG-------------------------------------DLAVMDENGYCKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
GR+KDMIIRGGENIYP+EIEEF+ THP +L+ GVPD GEEV I LKE+A+L
Sbjct: 437 GRLKDMIIRGGENIYPREIEEFLYTHPAILDVQVVGVPDAVYGEEVVAWIILKEDAELT 495
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 65/87 (74%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY ++ GR+KDMIIRGGENIYP+EIEEF+ THP +L+ GVPD GEEV
Sbjct: 423 DLAVMDENGYCKITGRLKDMIIRGGENIYPREIEEFLYTHPAILDVQVVGVPDAVYGEEV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
I LKE+A+L D+R +CKGK+S+
Sbjct: 483 VAWIILKEDAELTPADLREYCKGKISR 509
>gi|300776376|ref|ZP_07086234.1| AMP-binding enzyme [Chryseobacterium gleum ATCC 35910]
gi|300501886|gb|EFK33026.1| AMP-binding enzyme [Chryseobacterium gleum ATCC 35910]
Length = 541
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 90/181 (49%), Gaps = 39/181 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
P + Q ST+ + + K++D N R + G GEL RG+ ML YW D + TK+ +
Sbjct: 345 TPLEKQVSTVGTVQDHLEIKIIDENGRTLKRGEHGELCTRGYSVMLKYWNDPENTKKVLD 404
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
RW+ TG D V+ +DGY + G
Sbjct: 405 DARWMHTG-------------------------------------DMAVMDKDGYITISG 427
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
RIKD+IIRGGENI PKEIE+F+ T+ N+L+ GVP E+ GEEV +K+++ + A
Sbjct: 428 RIKDLIIRGGENISPKEIEDFLYTYTNILDVQIIGVPSEKFGEEVMAWVKVRKGFTITAE 487
Query: 183 E 183
E
Sbjct: 488 E 488
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 71/110 (64%)
Query: 376 KYLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
KY + EN R + D V+ +DGY + GRIKD+IIRGGENI PKEIE+F+
Sbjct: 391 KYWNDPENTKKVLDDARWMHTGDMAVMDKDGYITISGRIKDLIIRGGENISPKEIEDFLY 450
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
T+ N+L+ GVP E+ GEEV +K+++ + A++++ +CKG+++ +
Sbjct: 451 TYTNILDVQIIGVPSEKFGEEVMAWVKVRKGFTITAEELQEYCKGRIAHY 500
>gi|445400393|ref|ZP_21429951.1| AMP-binding enzyme [Acinetobacter baumannii Naval-57]
gi|444783301|gb|ELX07161.1| AMP-binding enzyme [Acinetobacter baumannii Naval-57]
Length = 564
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTFGELCVRGYSVMAGYWGEEEKTREVIDVAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +DG+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQDGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 508
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 69/108 (63%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D AG I E DQ DG+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDVAGWMHTGDIAEMDQ-----DGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 521
>gi|386758568|ref|YP_006231784.1| short-chain acyl-CoA synthetase [Bacillus sp. JS]
gi|384931850|gb|AFI28528.1| short-chain acyl-CoA synthetase [Bacillus sp. JS]
Length = 549
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 67/91 (73%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
+F D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP VL+ GVPD +
Sbjct: 419 LFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPAVLDVQVVGVPDAKF 478
Query: 454 GEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
GEE IKLK+ +++D+++ +CKGK+++
Sbjct: 479 GEEAAAWIKLKDGKSVSSDELKAYCKGKIAR 509
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 80/157 (50%), Gaps = 45/157 (28%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY++D++ T++ I D WL TG
Sbjct: 386 GVQGELCTRGYHVMKGYYKDKEATRKVINHDGWLFTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP VL+
Sbjct: 423 --------------DLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPAVLDV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
GVPD + GEE IKLK+ KS+SSD
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDG--------KSVSSD 497
>gi|307545011|ref|YP_003897490.1| acyl-CoA synthetase [Halomonas elongata DSM 2581]
gi|307217035|emb|CBV42305.1| acyl-CoA synthetase [Halomonas elongata DSM 2581]
Length = 560
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 90/178 (50%), Gaps = 40/178 (22%)
Query: 6 PTDLQFSTLSS--SSFQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
P D + +T+ + + K+V ++ VP G PGEL RG+ MLGYW +++ T + I
Sbjct: 370 PLDKRVTTVGTIHPHLEVKLVSPDDGAAVPRGEPGELCTRGYSVMLGYWNNDEATADAID 429
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ TG D + ++GY +VG
Sbjct: 430 AAGWMHTG-------------------------------------DLATMDDEGYVAIVG 452
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
RIKDMIIRGGENIYP+EIE+F+ THP + + GVPDE+ GEE+ +KL E L+
Sbjct: 453 RIKDMIIRGGENIYPREIEDFLYTHPAISDVQIIGVPDEKYGEEIMAWVKLSEGEDLD 510
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Query: 388 DSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYG 447
D+AG + D + ++GY +VGRIKDMIIRGGENIYP+EIE+F+ THP + + G
Sbjct: 429 DAAGW-MHTGDLATMDDEGYVAIVGRIKDMIIRGGENIYPREIEDFLYTHPAISDVQIIG 487
Query: 448 VPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
VPDE+ GEE+ +KL E L+ + ++ FC+G+++ F
Sbjct: 488 VPDEKYGEEIMAWVKLSEGEDLDEEGLKAFCEGRIAHF 525
>gi|384214527|ref|YP_005605691.1| hypothetical protein BJ6T_08100 [Bradyrhizobium japonicum USDA 6]
gi|354953424|dbj|BAL06103.1| hypothetical protein BJ6T_08100 [Bradyrhizobium japonicum USDA 6]
Length = 564
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 93/186 (50%), Gaps = 39/186 (20%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + ST+ + KVVD RIV G GEL RG+ MLGYWE+++KT + +
Sbjct: 368 DPLERRVSTVGRIHPHVEVKVVDLEGRIVKRGERGELCTRGYSIMLGYWEEKEKTADVLD 427
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
+ W+ TG D + ++GY +VG
Sbjct: 428 ANGWMHTG-------------------------------------DLATIDDEGYCNIVG 450
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
RIKD++IRGGEN+YP+EIEEF+ HP + + +GV D R GEE+ I+++ L A
Sbjct: 451 RIKDLVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADTRYGEELCAWIRVRPGETLTAE 510
Query: 183 EDKSIS 188
E ++
Sbjct: 511 EVRAFC 516
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 60/86 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY +VGRIKD++IRGGEN+YP+EIEEF+ HP + + +GV D R GEE+
Sbjct: 436 DLATIDDEGYCNIVGRIKDLVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADTRYGEEL 495
Query: 458 GISIKLKENAKLNADDIRTFCKGKVS 483
I+++ L A+++R FC G+++
Sbjct: 496 CAWIRVRPGETLTAEEVRAFCDGQIA 521
>gi|343927183|ref|ZP_08766662.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
gi|343762921|dbj|GAA13588.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
Length = 551
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 95/194 (48%), Gaps = 50/194 (25%)
Query: 5 NPTDLQFSTLSSSSFQAKVVDHNNRIVPFGT--------PGELLIRGHCNMLGYWEDEQK 56
+P +L+ +T+ ++ +IV GT GEL RG+ M GYW D +K
Sbjct: 357 DPLELRVTTVGQVGPHLEI-----KIVAPGTGETLGRNETGELCTRGYSVMTGYWNDPEK 411
Query: 57 TKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDG 116
T E I D W+ TG D + E G
Sbjct: 412 TAEAIDADGWMHTG-------------------------------------DLAEMDEAG 434
Query: 117 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
Y ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+ ++L+++
Sbjct: 435 YVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWVRLRDH 494
Query: 177 AKLNAYEDKSISSD 190
A ED +D
Sbjct: 495 ATDLTAEDVRAFAD 508
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ E GY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+ +
Sbjct: 430 MDEAGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWV 489
Query: 462 KLKENAK-LNADDIRTFCKGKVSK 484
+L+++A L A+D+R F GK+++
Sbjct: 490 RLRDHATDLTAEDVRAFADGKIAR 513
>gi|345002934|ref|YP_004805788.1| AMP-dependent synthetase and ligase [Streptomyces sp. SirexAA-E]
gi|344318560|gb|AEN13248.1| AMP-dependent synthetase and ligase [Streptomyces sp. SirexAA-E]
Length = 536
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 85/169 (50%), Gaps = 38/169 (22%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KV D + +P G GEL RG+ MLGYW++ ++T E + RW+ TG
Sbjct: 364 IEVKVTDPVTGVTLPRGAAGELCTRGYSVMLGYWDEPERTAEVVDAGRWMHTG------- 416
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY +++GRIKDMIIRGGEN+YP
Sbjct: 417 ------------------------------DLAVMREDGYVRIIGRIKDMIIRGGENVYP 446
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
+EIEEF+ HP + + GV DE+ GEE+ + ++ A E+ +
Sbjct: 447 REIEEFLYGHPKIADVQVVGVADEKYGEEILACVIPRDPAAPPTLEEVT 495
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
AGR + D V+REDGY +++GRIKDMIIRGGEN+YP+EIEEF+ HP + + GV
Sbjct: 409 AGRWMHTGDLAVMREDGYVRIIGRIKDMIIRGGENVYPREIEEFLYGHPKIADVQVVGVA 468
Query: 450 DERMGEEV-GISIKLKENAKLNADDIRTFCKGKVSKF 485
DE+ GEE+ I A +++ +C+ +++ +
Sbjct: 469 DEKYGEEILACVIPRDPAAPPTLEEVTAYCREQLAHY 505
>gi|167034657|ref|YP_001669888.1| AMP-binding domain-containing protein [Pseudomonas putida GB-1]
gi|166861145|gb|ABY99552.1| AMP-dependent synthetase and ligase [Pseudomonas putida GB-1]
Length = 560
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 86/168 (51%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSSFQA--KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + Q K+VD + IVP G GEL RG+ MLGYW++ Q T + I P
Sbjct: 369 ELRVTTVGRTQPQLENKLVDADGCIVPRGEIGELCTRGYSVMLGYWDNPQATADAIDPAG 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ +G D V+ E G+ ++VGR K
Sbjct: 429 WMHSG-------------------------------------DLAVMDEHGHVRIVGRNK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V +A G+P R GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIKL 499
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E G+ ++VGR KDMIIRGGENIYP+E+EEF THP V +A G+P R GEE+
Sbjct: 434 DLAVMDEHGHVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKL ++++ +CK +++ F
Sbjct: 494 VAWIKLHPGHSATVEELQGWCKARIAHF 521
>gi|153010019|ref|YP_001371234.1| AMP-dependent synthetase and ligase [Ochrobactrum anthropi ATCC
49188]
gi|151561907|gb|ABS15405.1| AMP-dependent synthetase and ligase [Ochrobactrum anthropi ATCC
49188]
Length = 562
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 91/181 (50%), Gaps = 39/181 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + ST+ + K+VD + ++VP G GELL RG+ M GYW D + + I
Sbjct: 366 DPLERRVSTVGRIHPHLEVKIVDADGKVVPRGEKGELLTRGYSVMRGYWNDAESSAGAID 425
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ TG D + E+GY +VG
Sbjct: 426 DAGWMHTG-------------------------------------DLATIDEEGYCNIVG 448
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
RIKD+IIRGGENIYP+EIEEF+ +HP + + +G+PD + GE + +KL ++ +L+
Sbjct: 449 RIKDLIIRGGENIYPREIEEFLFSHPAISDVQIFGIPDRKFGEIICAWVKLHKDGQLSEE 508
Query: 183 E 183
E
Sbjct: 509 E 509
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY +VGRIKD+IIRGGENIYP+EIEEF+ +HP + + +G+PD + GE +
Sbjct: 434 DLATIDEEGYCNIVGRIKDLIIRGGENIYPREIEEFLFSHPAISDVQIFGIPDRKFGEII 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+KL ++ +L+ +++ +C+ +++ +
Sbjct: 494 CAWVKLHKDGQLSEEELAEYCRQRIAHY 521
>gi|307108953|gb|EFN57192.1| hypothetical protein CHLNCDRAFT_21648 [Chlorella variabilis]
Length = 541
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 86/175 (49%), Gaps = 40/175 (22%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P D + ST+ +A+VVD + +P G+ GEL +RG+ MLGYW D T + I
Sbjct: 344 DPVDRRVSTVGRIHPHLEARVVDPGTCKTLPHGSVGELQVRGYSVMLGYWGDAASTAQAI 403
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ W+RTG D + GY +V
Sbjct: 404 DQEGWMRTG-------------------------------------DLATIDAQGYCNIV 426
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
GRIKDMI+RGGENIYP+E+EEF THP V + +GVP GE+V +KL++
Sbjct: 427 GRIKDMILRGGENIYPREVEEFQHTHPAVADVQVFGVPSRLYGEQVCAWVKLRDG 481
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + GY +VGRIKDMI+RGGENIYP+E+EEF THP V + +GVP GE+V
Sbjct: 413 DLATIDAQGYCNIVGRIKDMILRGGENIYPREVEEFQHTHPAVADVQVFGVPSRLYGEQV 472
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSKF 485
+KL++ + + ++R FC+GK++++
Sbjct: 473 CAWVKLRDGFSHVGRAELREFCRGKIARY 501
>gi|334346191|ref|YP_004554743.1| long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
gi|334102813|gb|AEG50237.1| Long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
Length = 543
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 84/161 (52%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+AKV+ + +P G GE RG+ MLGYW+D ++T E I + W+ +G
Sbjct: 368 EAKVIGPDGATLPVGEQGEYCSRGYAVMLGYWDDPERTAEAIDSEGWMHSG--------- 418
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ E GY ++ GRIKDMIIRGGENIYP+E
Sbjct: 419 ----------------------------DLAVMDEHGYVRITGRIKDMIIRGGENIYPRE 450
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEEF+ THP++ +A +GV E+ GEEV + K +A L+
Sbjct: 451 IEEFLLTHPSIADAQVFGVASEKYGEEVCAWVIRKPDAMLS 491
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++ GRIKDMIIRGGENIYP+EIEEF+ THP++ +A +GV E+ GEEV
Sbjct: 419 DLAVMDEHGYVRITGRIKDMIIRGGENIYPREIEEFLLTHPSIADAQVFGVASEKYGEEV 478
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ K +A L+ D+ C+G+++ F
Sbjct: 479 CAWVIRKPDAMLSEQDVLDHCRGRIAHF 506
>gi|404213877|ref|YP_006668071.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Gordonia
sp. KTR9]
gi|403644676|gb|AFR47916.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Gordonia
sp. KTR9]
Length = 547
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 96/195 (49%), Gaps = 46/195 (23%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ +T+ + K+VD G GEL RG+ M GYW + +KT E I
Sbjct: 353 DPLELRVTTVGRVGPHLEIKIVDPGTGETSGRGETGELCTRGYSVMTGYWNEPEKTAEAI 412
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ TG D + ++GY ++
Sbjct: 413 DADGWMHTG-------------------------------------DLADMDDNGYVRIT 435
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+ ++L+++A
Sbjct: 436 GRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWVRLRDSAS--- 492
Query: 182 YEDKSISSDYHEFET 196
+ D EF T
Sbjct: 493 ---GFTADDLREFAT 504
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ ++GY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+ +
Sbjct: 426 MDDNGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWV 485
Query: 462 KLKENAK-LNADDIRTFCKGKVSK 484
+L+++A ADD+R F GK+++
Sbjct: 486 RLRDSASGFTADDLREFATGKIAR 509
>gi|87199710|ref|YP_496967.1| AMP-binding protein [Novosphingobium aromaticivorans DSM 12444]
gi|87135391|gb|ABD26133.1| AMP-dependent synthetase and ligase [Novosphingobium
aromaticivorans DSM 12444]
Length = 543
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 90/194 (46%), Gaps = 54/194 (27%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+AK+V + +P G GE RG+ MLGYW+D +KT E I + W+ +G
Sbjct: 368 EAKIVGLDGETLPIGQQGEYCSRGYAVMLGYWDDPEKTAEAIDGEGWMHSG--------- 418
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + E GY ++ GRIKDMIIRGGENIYP+E
Sbjct: 419 ----------------------------DLATMDEHGYVRITGRIKDMIIRGGENIYPRE 450
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDYHEFETMYD 199
IEEF+ THP V +A +GV DE+ GEEV + + L+ +D
Sbjct: 451 IEEFLLTHPAVQDAQVFGVSDEKFGEEVCAWVIARSGHALS-----------------HD 493
Query: 200 SIMAHPNRTTPYYQ 213
I+AH +Y+
Sbjct: 494 DILAHCKGRIAHYK 507
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY ++ GRIKDMIIRGGENIYP+EIEEF+ THP V +A +GV DE+ GEEV
Sbjct: 419 DLATMDEHGYVRITGRIKDMIIRGGENIYPREIEEFLLTHPAVQDAQVFGVSDEKFGEEV 478
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ + L+ DDI CKG+++ +
Sbjct: 479 CAWVIARSGHALSHDDILAHCKGRIAHY 506
>gi|398996064|ref|ZP_10698927.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
gi|398127852|gb|EJM17254.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
Length = 561
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 84/163 (51%), Gaps = 38/163 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+AK+++ + IVP GT GEL +RG+ M GYW+D +KT +TI D W+ +G
Sbjct: 383 LEAKIINPESGAIVPIGTVGELCVRGYSLMQGYWDDPEKTAQTIDADGWIHSG------- 435
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + E+GY + GRIKDM+IRGGENI P
Sbjct: 436 ------------------------------DLAAMDEEGYVSITGRIKDMVIRGGENISP 465
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
+EIEEF+ HP + +A GV D + GEE+ + I + A +N
Sbjct: 466 REIEEFLYQHPAIQDAQVIGVSDRKYGEELCVWIVPRAGASIN 508
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 61/92 (66%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
I D + E+GY + GRIKDM+IRGGENI P+EIEEF+ HP + +A GV D +
Sbjct: 432 IHSGDLAAMDEEGYVSITGRIKDMVIRGGENISPREIEEFLYQHPAIQDAQVIGVSDRKY 491
Query: 454 GEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
GEE+ + I + A +N DDIR FC G+++++
Sbjct: 492 GEELCVWIVPRAGASINEDDIRAFCDGQIARY 523
>gi|15613694|ref|NP_241997.1| AMP-binding domain protein [Bacillus halodurans C-125]
gi|10173747|dbj|BAB04850.1| long-chain fatty-acid-CoA ligase [Bacillus halodurans C-125]
Length = 546
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 93/182 (51%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + + K+V+ + V G GEL RG+ M GY++++Q T+E I
Sbjct: 354 DPIELRVQTVGRPLPNVEVKIVEPGTEKEVAPGVQGELCTRGYHVMKGYYKNQQATREVI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D V+ E GY ++
Sbjct: 414 KEDGWLHTG-------------------------------------DLAVMDEAGYCRIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ HP++L+A GVPDE+ GE V IKLK + +
Sbjct: 437 GRLKDMIIRGGENIYPREIEEFLYQHPDILDAQVVGVPDEKYGEAVSAWIKLKPGVSVTS 496
Query: 182 YE 183
E
Sbjct: 497 EE 498
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 65/88 (73%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++ GR+KDMIIRGGENIYP+EIEEF+ HP++L+A GVPDE+ GE V
Sbjct: 423 DLAVMDEAGYCRITGRLKDMIIRGGENIYPREIEEFLYQHPDILDAQVVGVPDEKYGEAV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKLK + +++IR FC+GKV+ +
Sbjct: 483 SAWIKLKPGVSVTSEEIRDFCQGKVAHY 510
>gi|431890786|gb|ELK01665.1| Acyl-CoA synthetase family member 2, mitochondrial [Pteropus
alecto]
Length = 169
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 76/150 (50%), Gaps = 37/150 (24%)
Query: 27 NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRR 86
R+ PGEL IRG+C MLGYW + QKT+E I D+W +TG
Sbjct: 3 TGRLAELNEPGELWIRGYCVMLGYWNESQKTEEAISQDKWYKTG---------------- 46
Query: 87 KLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 146
D + E G+ ++VGR KDMIIRGGENIYP E+E+F T
Sbjct: 47 ---------------------DIATIDEKGFCRIVGRSKDMIIRGGENIYPAELEDFFYT 85
Query: 147 HPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
HP V + GV D RMGEE+ I+LK+
Sbjct: 86 HPQVQQVQVVGVKDYRMGEEICACIQLKQG 115
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V + GV D RMGEE+
Sbjct: 47 DIATIDEKGFCRIVGRSKDMIIRGGENIYPAELEDFFYTHPQVQQVQVVGVKDYRMGEEI 106
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + +DI+ FCKGK++ F
Sbjct: 107 CACIQLKQGEETTPEDIKAFCKGKIAHF 134
>gi|296330516|ref|ZP_06872994.1| AMP-binding domain protein [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305674565|ref|YP_003866237.1| short-chain acyl-CoA synthetase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|6449061|gb|AAF08801.1|AF184956_8 YngI [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|296152198|gb|EFG93069.1| AMP-binding domain protein [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305412809|gb|ADM37928.1| short-chain acyl-CoA synthetase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 549
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 76/143 (53%), Gaps = 37/143 (25%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY++DE+ T++ I PD WL TG
Sbjct: 386 GGQGELCTRGYHVMKGYYKDEEATRKAINPDGWLFTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP++L+
Sbjct: 423 --------------DLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPDILDV 468
Query: 154 YAYGVPDERMGEEVGISIKLKEN 176
GVPD + GEE IKLK+
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDG 491
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Query: 370 RIYHYKK-YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 428
R YH K Y ++EE + +F D V+ EDGY ++ GR+KDM+IRGGENIYP+
Sbjct: 394 RGYHVMKGYYKDEEATRKAINPDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPR 453
Query: 429 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
EIEEF+ HP++L+ GVPD + GEE IKLK+ + ++++ +CKGK+++
Sbjct: 454 EIEEFLYRHPDILDVQVVGVPDAKFGEEAAAWIKLKDGKTASPEELKDYCKGKIAR 509
>gi|393764545|ref|ZP_10353150.1| AMP-binding domain-containing protein, partial [Methylobacterium
sp. GXF4]
gi|392729910|gb|EIZ87170.1| AMP-binding domain-containing protein, partial [Methylobacterium
sp. GXF4]
Length = 413
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 39/186 (20%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + +T+ + K+V+ R+VP G PGEL RG+ MLGYW+D K+ E I
Sbjct: 216 DPLERRVATVGRVHPHLEVKIVNAEGRVVPRGEPGELCTRGYSVMLGYWDDPAKSDEVID 275
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ TG D L DGY +VG
Sbjct: 276 AAGWMHTG-------------------------------------DLATLDADGYCNIVG 298
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGEN+YP+EIEE++ HP + + +GV D + GEE+ I++++ ++
Sbjct: 299 RLKDMVIRGGENLYPREIEEYLYRHPKIQDVQVFGVSDPKYGEELCAWIRVRDGETVSED 358
Query: 183 EDKSIS 188
E ++
Sbjct: 359 EVRAFC 364
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Query: 386 VPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYA 445
V D+AG + D L DGY +VGR+KDM+IRGGEN+YP+EIEE++ HP + +
Sbjct: 273 VIDAAG-WMHTGDLATLDADGYCNIVGRLKDMVIRGGENLYPREIEEYLYRHPKIQDVQV 331
Query: 446 YGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
+GV D + GEE+ I++++ ++ D++R FC+G+++
Sbjct: 332 FGVSDPKYGEELCAWIRVRDGETVSEDEVRAFCRGQIA 369
>gi|344285395|ref|XP_003414447.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Loxodonta africana]
Length = 615
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 88/168 (52%), Gaps = 38/168 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V + ++ PGEL IRG+C MLGYW + QKT+E +G D+W RTG
Sbjct: 441 EAQIVSTETSALMELNKPGELWIRGYCVMLGYWGEPQKTEEAVGQDKWYRTG-------- 492
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D ++ E+G+ ++VGR KD+IIRGGENIYP
Sbjct: 493 -----------------------------DIAMMDEEGFCKIVGRSKDLIIRGGENIYPA 523
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
E+E+F HP V E GV D+RMGEE+ I+LK K E K+
Sbjct: 524 ELEDFFHKHPQVQEVQVVGVKDDRMGEEICACIRLKSGEKATPEEIKA 571
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E+G+ ++VGR KD+IIRGGENIYP E+E+F HP V E GV D+RMGEE+
Sbjct: 493 DIAMMDEEGFCKIVGRSKDLIIRGGENIYPAELEDFFHKHPQVQEVQVVGVKDDRMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK K ++I+ +CKGK+S F
Sbjct: 553 CACIRLKSGEKATPEEIKAYCKGKISHF 580
>gi|421520277|ref|ZP_15966943.1| AMP-binding domain protein [Pseudomonas putida LS46]
gi|402755831|gb|EJX16299.1| AMP-binding domain protein [Pseudomonas putida LS46]
Length = 560
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 87/178 (48%), Gaps = 39/178 (21%)
Query: 8 DLQFSTLSSSSFQA--KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + Q K+VD + IV G GEL RG+ MLGYW++ Q T + I P
Sbjct: 369 ELRVTTVGRTQPQLENKLVDADGCIVARGEIGELCTRGYSVMLGYWDNPQATADAIDPAG 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ +G D V+ E GY ++VGR K
Sbjct: 429 WMHSG-------------------------------------DLAVMDEQGYVRIVGRNK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
DMIIRGGENIYP+E+EEF THP V +A G+P R GEE+ IKL A E
Sbjct: 452 DMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIKLHPGHSATAEE 509
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V +A G+P R GEE+
Sbjct: 434 DLAVMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKL A++++ +CK +++ F
Sbjct: 494 VAWIKLHPGHSATAEELQGWCKARIAHF 521
>gi|418033002|ref|ZP_12671480.1| acyl-CoA synthetase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|351470206|gb|EHA30365.1| acyl-CoA synthetase [Bacillus subtilis subsp. subtilis str. SC-8]
Length = 549
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 66/91 (72%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
+F D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP VL+ GVPD +
Sbjct: 419 LFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYQHPAVLDVQVVGVPDAKF 478
Query: 454 GEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
GEE IKLK+ ++ D+++ +CKGK+++
Sbjct: 479 GEEAAAWIKLKDGKSVSPDELKAYCKGKIAR 509
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 78/153 (50%), Gaps = 37/153 (24%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY++D+ T++ I D WL TG
Sbjct: 386 GMQGELCTRGYHVMKGYYKDKDATRKAINHDGWLFTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP VL+
Sbjct: 423 --------------DLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYQHPAVLDV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
GVPD + GEE IKLK+ ++ E K+
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKSVSPDELKA 501
>gi|423096168|ref|ZP_17083964.1| acyl-CoA synthetase [Pseudomonas fluorescens Q2-87]
gi|397885533|gb|EJL02016.1| acyl-CoA synthetase [Pseudomonas fluorescens Q2-87]
Length = 565
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 85/176 (48%), Gaps = 39/176 (22%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D IVP GT GEL RG+ MLGYW + + T E I PD
Sbjct: 375 ELRVTTVGRTQPHLESKIIDEAGEIVPQGTVGELCTRGYSVMLGYWNNPKGTAEAIDPDG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + GY +VGR K
Sbjct: 435 WMHTG-------------------------------------DLATMDAQGYVCIVGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
DMIIRGGENIYP+E+EEF THP V++ G+P GE++ IKL + A
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVVDVQVIGIPCSCYGEQIVAWIKLHPGHSVTA 513
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + GY +VGR KDMIIRGGENIYP+E+EEF THP V++ G+P GE++
Sbjct: 440 DLATMDAQGYVCIVGRNKDMIIRGGENIYPRELEEFFFTHPAVVDVQVIGIPCSCYGEQI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKL + A ++ +CK +++ F
Sbjct: 500 VAWIKLHPGHSVTAPQLQAWCKERIAHF 527
>gi|428279483|ref|YP_005561218.1| acyl-CoA synthetase [Bacillus subtilis subsp. natto BEST195]
gi|291484440|dbj|BAI85515.1| acyl-CoA synthetase [Bacillus subtilis subsp. natto BEST195]
Length = 549
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Query: 370 RIYHYKK-YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 428
R YH K Y +++E + +F D V+ EDGY ++ GR+KDM+IRGGENIYP+
Sbjct: 394 RGYHVMKGYYKDKEATRKAINHDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPR 453
Query: 429 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
EIEEF+ HP VL+ GVPD + GEE IKLK+ ++ D+++ +CKGK+++
Sbjct: 454 EIEEFLYRHPAVLDVQVVGVPDAKFGEEAAAWIKLKDGKSVSPDELKAYCKGKIAR 509
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 79/153 (51%), Gaps = 37/153 (24%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY++D++ T++ I D WL TG
Sbjct: 386 GMQGELCTRGYHVMKGYYKDKEATRKAINHDGWLFTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP VL+
Sbjct: 423 --------------DLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPAVLDV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
GVPD + GEE IKLK+ ++ E K+
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKSVSPDELKA 501
>gi|16078886|ref|NP_389707.1| AMP-binding protein [Bacillus subtilis subsp. subtilis str. 168]
gi|221309716|ref|ZP_03591563.1| acyl-CoA synthetase [Bacillus subtilis subsp. subtilis str. 168]
gi|221314038|ref|ZP_03595843.1| acyl-CoA synthetase [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221318960|ref|ZP_03600254.1| acyl-CoA synthetase [Bacillus subtilis subsp. subtilis str. JH642]
gi|221323234|ref|ZP_03604528.1| acyl-CoA synthetase [Bacillus subtilis subsp. subtilis str. SMY]
gi|402776071|ref|YP_006630015.1| acyl-CoA synthetase [Bacillus subtilis QB928]
gi|452913908|ref|ZP_21962535.1| AMP-binding enzyme family protein [Bacillus subtilis MB73/2]
gi|81669033|sp|O31826.1|YNGI_BACSU RecName: Full=Putative acyl-CoA synthetase YngI
gi|2634208|emb|CAB13708.1| putative acetoacetyl-CoA synthetase [Bacillus subtilis subsp.
subtilis str. 168]
gi|402481252|gb|AFQ57761.1| Putative acyl-CoA synthetase [Bacillus subtilis QB928]
gi|407959240|dbj|BAM52480.1| AMP-binding protein [Bacillus subtilis BEST7613]
gi|407964817|dbj|BAM58056.1| AMP-binding protein [Bacillus subtilis BEST7003]
gi|452116328|gb|EME06723.1| AMP-binding enzyme family protein [Bacillus subtilis MB73/2]
Length = 549
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 66/91 (72%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
+F D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP VL+ GVPD +
Sbjct: 419 LFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYQHPAVLDVQVVGVPDAKF 478
Query: 454 GEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
GEE IKLK+ ++ D+++ +CKGK+++
Sbjct: 479 GEEAAAWIKLKDGKSVSPDELKAYCKGKIAR 509
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 78/153 (50%), Gaps = 37/153 (24%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY++D+ T++ I D WL TG
Sbjct: 386 GMQGELCTRGYHVMKGYYKDKDATRKAINHDGWLFTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP VL+
Sbjct: 423 --------------DLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYQHPAVLDV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
GVPD + GEE IKLK+ ++ E K+
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKSVSPDELKA 501
>gi|321311472|ref|YP_004203759.1| AMP-binding domain-containing protein [Bacillus subtilis BSn5]
gi|320017746|gb|ADV92732.1| AMP-binding domain protein [Bacillus subtilis BSn5]
Length = 549
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Query: 370 RIYHYKK-YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 428
R YH K Y +++E + +F D V+ EDGY ++ GR+KDM+IRGGENIYP+
Sbjct: 394 RGYHVMKGYYKDKEATRKAINHDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPR 453
Query: 429 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
EIEEF+ HP VL+ GVPD + GEE IKLK+ ++ D+++ +CKGK+++
Sbjct: 454 EIEEFLYRHPAVLDVQVVGVPDAKFGEEAAAWIKLKDGKSVSPDELKAYCKGKIAR 509
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 79/153 (51%), Gaps = 37/153 (24%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY++D++ T++ I D WL TG
Sbjct: 386 GVQGELCTRGYHVMKGYYKDKEATRKAINHDGWLFTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP VL+
Sbjct: 423 --------------DLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPAVLDV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
GVPD + GEE IKLK+ ++ E K+
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKSVSPDELKA 501
>gi|452975963|gb|EME75780.1| AMP-binding domain protein [Bacillus sonorensis L12]
Length = 545
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 64/88 (72%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +DGY ++ GR+KDMIIRGGENIYP+EIEEF+ HP +L+ GVPDE GEEV
Sbjct: 423 DLAVMDDDGYCRITGRLKDMIIRGGENIYPREIEEFLYQHPKILDVQVVGVPDETFGEEV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKLK A++IR +CKGK++++
Sbjct: 483 SAWIKLKNGEHATAEEIREYCKGKIARY 510
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 81/166 (48%), Gaps = 38/166 (22%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+ D NNR V G GEL RG+ M GY+++ Q T I + +L TG
Sbjct: 370 IEVKITDPDNNREVERGRQGELCTRGYHVMKGYYKNPQATAAAIDDEGFLHTG------- 422
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ +DGY ++ GR+KDMIIRGGENIYP
Sbjct: 423 ------------------------------DLAVMDDDGYCRITGRLKDMIIRGGENIYP 452
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
+EIEEF+ HP +L+ GVPDE GEEV IKLK A E
Sbjct: 453 REIEEFLYQHPKILDVQVVGVPDETFGEEVSAWIKLKNGEHATAEE 498
>gi|384175592|ref|YP_005556977.1| YngI [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|349594816|gb|AEP91003.1| YngI [Bacillus subtilis subsp. subtilis str. RO-NN-1]
Length = 549
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Query: 370 RIYHYKK-YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 428
R YH K Y +++E + +F D V+ EDGY ++ GR+KDM+IRGGENIYP+
Sbjct: 394 RGYHVMKGYYKDKEATRKAINHDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPR 453
Query: 429 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
EIEEF+ HP VL+ GVPD + GEE IKLK+ ++ D+++ +CKGK+++
Sbjct: 454 EIEEFLYRHPAVLDVQVVGVPDAKFGEEAAAWIKLKDGKSVSPDELKAYCKGKIAR 509
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 79/153 (51%), Gaps = 37/153 (24%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY++D++ T++ I D WL TG
Sbjct: 386 GMQGELCTRGYHVMKGYYKDKEATRKAINHDGWLFTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP VL+
Sbjct: 423 --------------DLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPAVLDV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
GVPD + GEE IKLK+ ++ E K+
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKSVSPDELKA 501
>gi|418528737|ref|ZP_13094681.1| AMP-binding domain protein [Comamonas testosteroni ATCC 11996]
gi|371454214|gb|EHN67222.1| AMP-binding domain protein [Comamonas testosteroni ATCC 11996]
Length = 582
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 81/163 (49%), Gaps = 38/163 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD I+P G GEL RG+ M GYWEDE +T+E I ++W+ TG
Sbjct: 401 LEVKIVDPSTGEIMPPGQSGELCTRGYSVMHGYWEDEARTREAIDAEQWMHTG------- 453
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + +GY +VGRIKDM+IRGGENIYP
Sbjct: 454 ------------------------------DLATMDAEGYVNIVGRIKDMVIRGGENIYP 483
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
+EIEEF+ HP V + GVPD R GEE+ I +K +L
Sbjct: 484 REIEEFLYRHPKVQDVQVVGVPDVRYGEELCAWIIVKPGQELG 526
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGRIKDM+IRGGENIYP+EIEEF+ HP V + GVPD R GEE+
Sbjct: 454 DLATMDAEGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPKVQDVQVVGVPDVRYGEEL 513
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I +K +L D++R FCKG+++ +
Sbjct: 514 CAWIIVKPGQELGEDEVRDFCKGQIAHY 541
>gi|313233611|emb|CBY09782.1| unnamed protein product [Oikopleura dioica]
Length = 566
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 83/167 (49%), Gaps = 38/167 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD + + V G GE+ IRG C GY+ + +KT E + D W TG
Sbjct: 390 EAKLVDTEHGKTVEMGEKGEICIRGPCVFKGYFNEPEKTAEVVDEDGWYHTG-------- 441
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E GY ++VGR KDMIIRGGENIYP
Sbjct: 442 -----------------------------DLATMDESGYVKIVGRAKDMIIRGGENIYPA 472
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
E+E F+ HP V++A GVP +R+GEEV ++L A+L A E K
Sbjct: 473 EVESFLLKHPAVVDAQVVGVPSKRLGEEVAAYVRLASGAELTADELK 519
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY ++VGR KDMIIRGGENIYP E+E F+ HP V++A GVP +R+GEEV
Sbjct: 442 DLATMDESGYVKIVGRAKDMIIRGGENIYPAEVESFLLKHPAVVDAQVVGVPSKRLGEEV 501
Query: 458 GISIKLKENAKLNADDIRTF 477
++L A+L AD+++ +
Sbjct: 502 AAYVRLASGAELTADELKQY 521
>gi|2266424|emb|CAA74222.1| yngI [Bacillus subtilis subsp. subtilis str. 168]
Length = 523
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 66/91 (72%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
+F D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP VL+ GVPD +
Sbjct: 393 LFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYQHPAVLDVQVVGVPDAKF 452
Query: 454 GEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
GEE IKLK+ ++ D+++ +CKGK+++
Sbjct: 453 GEEAAAWIKLKDGKSVSPDELKAYCKGKIAR 483
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 78/153 (50%), Gaps = 37/153 (24%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY++D+ T++ I D WL TG
Sbjct: 360 GMQGELCTRGYHVMKGYYKDKDATRKAINHDGWLFTG----------------------- 396
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP VL+
Sbjct: 397 --------------DLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYQHPAVLDV 442
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
GVPD + GEE IKLK+ ++ E K+
Sbjct: 443 QVVGVPDAKFGEEAAAWIKLKDGKSVSPDELKA 475
>gi|421790190|ref|ZP_16226419.1| AMP-binding enzyme [Acinetobacter baumannii Naval-82]
gi|421808775|ref|ZP_16244617.1| AMP-binding enzyme [Acinetobacter baumannii OIFC035]
gi|410395482|gb|EKP47777.1| AMP-binding enzyme [Acinetobacter baumannii Naval-82]
gi|410415326|gb|EKP67116.1| AMP-binding enzyme [Acinetobacter baumannii OIFC035]
Length = 564
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + ++G+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQEGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 508
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ +G+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDAAGWMHTGDIAEMDQ-----EGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 521
>gi|417553099|ref|ZP_12204169.1| AMP-binding enzyme [Acinetobacter baumannii Naval-81]
gi|417563359|ref|ZP_12214238.1| AMP-binding enzyme [Acinetobacter baumannii OIFC137]
gi|421197924|ref|ZP_15655093.1| AMP-binding enzyme [Acinetobacter baumannii OIFC109]
gi|421633016|ref|ZP_16073659.1| AMP-binding enzyme [Acinetobacter baumannii Naval-13]
gi|421805439|ref|ZP_16241326.1| AMP-binding enzyme [Acinetobacter baumannii WC-A-694]
gi|395525941|gb|EJG14030.1| AMP-binding enzyme [Acinetobacter baumannii OIFC137]
gi|395566430|gb|EJG28073.1| AMP-binding enzyme [Acinetobacter baumannii OIFC109]
gi|400393358|gb|EJP60404.1| AMP-binding enzyme [Acinetobacter baumannii Naval-81]
gi|408707735|gb|EKL53018.1| AMP-binding enzyme [Acinetobacter baumannii Naval-13]
gi|410408948|gb|EKP60890.1| AMP-binding enzyme [Acinetobacter baumannii WC-A-694]
Length = 564
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + ++G+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQEGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 508
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ +G+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDAAGWMHTGDIAEMDQ-----EGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 521
>gi|449094516|ref|YP_007427007.1| AMP-binding domain protein [Bacillus subtilis XF-1]
gi|363747665|gb|AEW31026.1| short-chain acyl-CoA synthetase [Bacillus subtilis subsp. subtilis]
gi|449028431|gb|AGE63670.1| AMP-binding domain protein [Bacillus subtilis XF-1]
Length = 549
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Query: 370 RIYHYKK-YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 428
R YH K Y +++E + +F D V+ EDGY ++ GR+KDM+IRGGENIYP+
Sbjct: 394 RGYHVMKGYYKDKEATRKAINHDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPR 453
Query: 429 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
EIEEF+ HP VL+ GVPD + GEE IKLK+ ++ D+++ +CKGK+++
Sbjct: 454 EIEEFLYRHPAVLDVQVVGVPDAKFGEEAAAWIKLKDGKSVSPDELKAYCKGKIAR 509
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 79/153 (51%), Gaps = 37/153 (24%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY++D++ T++ I D WL TG
Sbjct: 386 GAQGELCTRGYHVMKGYYKDKEATRKAINHDGWLFTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP VL+
Sbjct: 423 --------------DLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPAVLDV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
GVPD + GEE IKLK+ ++ E K+
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKSVSPDELKA 501
>gi|445456697|ref|ZP_21446033.1| AMP-binding enzyme [Acinetobacter baumannii OIFC047]
gi|444777613|gb|ELX01638.1| AMP-binding enzyme [Acinetobacter baumannii OIFC047]
Length = 564
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + ++G+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQEGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 508
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ +G+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDAAGWMHTGDIAEMDQ-----EGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 521
>gi|421653189|ref|ZP_16093530.1| AMP-binding enzyme [Acinetobacter baumannii OIFC0162]
gi|425751049|ref|ZP_18869003.1| AMP-binding enzyme [Acinetobacter baumannii WC-348]
gi|408503426|gb|EKK05196.1| AMP-binding enzyme [Acinetobacter baumannii OIFC0162]
gi|425484834|gb|EKU51234.1| AMP-binding enzyme [Acinetobacter baumannii WC-348]
Length = 564
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + ++G+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQEGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 508
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ +G+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDAAGWMHTGDIAEMDQ-----EGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 521
>gi|359786297|ref|ZP_09289433.1| acyl-CoA synthetase [Halomonas sp. GFAJ-1]
gi|359296411|gb|EHK60663.1| acyl-CoA synthetase [Halomonas sp. GFAJ-1]
Length = 567
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 83/160 (51%), Gaps = 38/160 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
++K+VD N I+P G GEL RG+ ML YW++E+ T E I W+ TG
Sbjct: 387 LESKIVDPGNGGILPRGEIGELCTRGYSVMLKYWKNEKATAEAIDEAGWMHTG------- 439
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + E+GY Q+VGRIKDM+IRGGEN+YP
Sbjct: 440 ------------------------------DLATMDEEGYIQIVGRIKDMVIRGGENVYP 469
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
KEIEEF+ HP + E GVPD++ GEE+ +KL ++
Sbjct: 470 KEIEEFLYAHPAISEVQVTGVPDKKYGEELIAWVKLNSSS 509
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY Q+VGRIKDM+IRGGEN+YPKEIEEF+ HP + E GVPD++ GEE+
Sbjct: 440 DLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYAHPAISEVQVTGVPDKKYGEEL 499
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
+KL ++ + +++R +CKGK++ F
Sbjct: 500 IAWVKLNSSSGDVTGEELRNYCKGKITHF 528
>gi|398807231|ref|ZP_10566112.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Variovorax
sp. CF313]
gi|398089728|gb|EJL80233.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Variovorax
sp. CF313]
Length = 557
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 86/173 (49%), Gaps = 40/173 (23%)
Query: 5 NPTDLQFSTLSSSS--FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P D + ST+ + + K+VD I+P G GEL RG+ M GYWEDE KT+E I
Sbjct: 360 TPLDRRVSTVGTVQPHLEVKIVDAETGAIMPVGKSGELCTRGYSVMHGYWEDEPKTREAI 419
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ W+ TG D + +GY +V
Sbjct: 420 DAEHWMHTG-------------------------------------DLATMDAEGYVNIV 442
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
GRIKD++IRGGENIYP+EIEEF+ HP V + G+PD++ GEE+ I +K
Sbjct: 443 GRIKDLVIRGGENIYPREIEEFLYRHPKVQDVQVVGLPDKKYGEELCAWIIVK 495
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGRIKD++IRGGENIYP+EIEEF+ HP V + G+PD++ GEE+
Sbjct: 429 DLATMDAEGYVNIVGRIKDLVIRGGENIYPREIEEFLYRHPKVQDVQVVGLPDKKYGEEL 488
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I +K +IR FCKG+++ +
Sbjct: 489 CAWIIVKPGQTATDTEIRDFCKGQIAHY 516
>gi|308179067|ref|YP_003918473.1| fatty-acid--CoA ligase [Arthrobacter arilaitensis Re117]
gi|307746530|emb|CBT77502.1| putative fatty-acid--CoA ligase [Arthrobacter arilaitensis Re117]
Length = 535
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 79/157 (50%), Gaps = 38/157 (24%)
Query: 19 FQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD + + G GE RG+ MLGYW DE+KT+ I + W+ TG
Sbjct: 361 VEIKVVDPVSGETLERGETGEYCTRGYSVMLGYWNDEEKTRAAIDDEGWMHTG------- 413
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY +VGRIKDM+IRGGENIYP
Sbjct: 414 ------------------------------DLAVMREDGYCTIVGRIKDMVIRGGENIYP 443
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
EIEEF+ HP++ + GVPD + GE V I++K
Sbjct: 444 AEIEEFLYKHPDIEDVSVIGVPDSKFGEVVCACIRMK 480
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+REDGY +VGRIKDM+IRGGENIYP EIEEF+ HP++ + GVPD + GE V
Sbjct: 414 DLAVMREDGYCTIVGRIKDMVIRGGENIYPAEIEEFLYKHPDIEDVSVIGVPDSKFGEVV 473
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSKF 485
I++K + L D IR + G+++ +
Sbjct: 474 CACIRMKAGRQPLTVDAIREYSAGQLAHY 502
>gi|212638029|ref|YP_002314549.1| AMP-binding domain-containing protein [Anoxybacillus flavithermus
WK1]
gi|212559509|gb|ACJ32564.1| Acyl-CoA synthetase/AMP-acid ligase II [Anoxybacillus flavithermus
WK1]
Length = 546
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 96/206 (46%), Gaps = 49/206 (23%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + + K+VD N+ VP G GEL RG+ M GY+ + T+E I
Sbjct: 351 DPIELRVETVGRALPHVEVKIVDPVTNQEVPPGVQGELCTRGYHVMKGYYNNPSATQEAI 410
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ WL TG D V+ E+GY ++
Sbjct: 411 DEEGWLHTG-------------------------------------DLAVMDENGYCRIT 433
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ HP VL+ GVPDE GEEV I LKE
Sbjct: 434 GRLKDMIIRGGENIYPREIEEFLYKHPKVLDVQVVGVPDETYGEEVMAWIILKEGEHATP 493
Query: 182 YEDKSISSD---------YHEFETMY 198
+ +S Y EF T Y
Sbjct: 494 EDIRSFCEGHISRHKIPRYIEFTTAY 519
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 62/87 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY ++ GR+KDMIIRGGENIYP+EIEEF+ HP VL+ GVPDE GEEV
Sbjct: 420 DLAVMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKVLDVQVVGVPDETYGEEV 479
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
I LKE +DIR+FC+G +S+
Sbjct: 480 MAWIILKEGEHATPEDIRSFCEGHISR 506
>gi|409393138|ref|ZP_11244621.1| putative fatty-acid--CoA ligase [Gordonia rubripertincta NBRC
101908]
gi|403197125|dbj|GAB87855.1| putative fatty-acid--CoA ligase [Gordonia rubripertincta NBRC
101908]
Length = 551
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 95/194 (48%), Gaps = 50/194 (25%)
Query: 5 NPTDLQFSTLSSSSFQAKVVDHNNRIVPFGT--------PGELLIRGHCNMLGYWEDEQK 56
+P +L+ +T+ ++ +IV GT GEL RG+ M GYW D +K
Sbjct: 357 DPLELRVTTVGQVGPHLEI-----KIVAPGTGETLGRNETGELCTRGYSVMTGYWNDPEK 411
Query: 57 TKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDG 116
T E I D W+ TG D + + G
Sbjct: 412 TAEAIDADGWMHTG-------------------------------------DLAEMDDAG 434
Query: 117 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
Y ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+ ++L+++
Sbjct: 435 YVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWVRLRDH 494
Query: 177 AKLNAYEDKSISSD 190
A ED +D
Sbjct: 495 ATDLTVEDVRAFAD 508
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Query: 406 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
GY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+ ++L++
Sbjct: 434 GYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWVRLRD 493
Query: 466 NAK-LNADDIRTFCKGKVSK 484
+A L +D+R F GK+++
Sbjct: 494 HATDLTVEDVRAFADGKIAR 513
>gi|341891057|gb|EGT46992.1| hypothetical protein CAEBREN_25008 [Caenorhabditis brenneri]
Length = 633
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 37/166 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A +VD N IVP G GE+++RG+ M YW E++TK+ I DRW TG
Sbjct: 445 LEAAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQDRWYHTG-------- 496
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ ++G +VGR KDMI+RGGENIYP
Sbjct: 497 -----------------------------DIAVMHDNGTISIVGRSKDMIVRGGENIYPT 527
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
E+E+F+ H +V + + GVPDER GE V ++L E+A+ E+
Sbjct: 528 EVEQFLFKHQSVEDVHIVGVPDERFGEVVCAWVRLHESAEGKTTEE 573
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 8/197 (4%)
Query: 294 PVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITPALKGLYHFKKWMNPKFSTT 353
P+TL R L+ + + ++ E F ++ +K + H M+ +
Sbjct: 393 PITLCRRLVQDMHMTDMQVCYGTTETSPVSFMSTRDDPPEQRIKSVGHI---MDHLEAAI 449
Query: 354 TRKVALTWPNSMDSEARIYHY---KKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQV 410
K P + E + Y + Y EE + R D V+ ++G +
Sbjct: 450 VDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQDRWYHTGDIAVMHDNGTISI 509
Query: 411 VGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA--K 468
VGR KDMI+RGGENIYP E+E+F+ H +V + + GVPDER GE V ++L E+A K
Sbjct: 510 VGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHIVGVPDERFGEVVCAWVRLHESAEGK 569
Query: 469 LNADDIRTFCKGKVSKF 485
+DI+ +CKGK++ F
Sbjct: 570 TTEEDIKAWCKGKIAHF 586
>gi|421654949|ref|ZP_16095274.1| AMP-binding enzyme [Acinetobacter baumannii Naval-72]
gi|408509703|gb|EKK11373.1| AMP-binding enzyme [Acinetobacter baumannii Naval-72]
Length = 564
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + ++G+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQEGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 508
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ +G+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDAAGWMHTGDIAEMDQ-----EGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 521
>gi|395448322|ref|YP_006388575.1| AMP-binding domain-containing protein [Pseudomonas putida ND6]
gi|388562319|gb|AFK71460.1| AMP-binding domain-containing protein [Pseudomonas putida ND6]
Length = 560
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 87/178 (48%), Gaps = 39/178 (21%)
Query: 8 DLQFSTLSSSSFQA--KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + Q K+VD + I+ G GEL RG+ MLGYW++ Q T + I P
Sbjct: 369 ELRVTTVGRTQPQLENKLVDADGCIIARGEIGELCTRGYSVMLGYWDNPQATADAIDPAG 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ +G D V+ E GY ++VGR K
Sbjct: 429 WMHSG-------------------------------------DLAVMDEQGYVRIVGRNK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
DMIIRGGENIYP+E+EEF THP V +A G+P R GEE+ IKL A E
Sbjct: 452 DMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIKLHPGHSATAEE 509
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V +A G+P R GEE+
Sbjct: 434 DLAVMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKL A++++ +CK +++ F
Sbjct: 494 VAWIKLHPGHSATAEELQGWCKARIAHF 521
>gi|71994690|ref|NP_001023937.1| Protein ACS-1, isoform a [Caenorhabditis elegans]
gi|351063224|emb|CCD71310.1| Protein ACS-1, isoform a [Caenorhabditis elegans]
Length = 623
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 37/166 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A +VD N IVP G GE+++RG+ M YW E++TK+ I DRW TG
Sbjct: 435 LEAAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQDRWYHTG-------- 486
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ ++G +VGR KDMI+RGGENIYP
Sbjct: 487 -----------------------------DIAVMHDNGTISIVGRSKDMIVRGGENIYPT 517
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
E+E+F+ H +V + + GVPDER GE V ++L E+A+ E+
Sbjct: 518 EVEQFLFKHQSVEDVHIVGVPDERFGEVVCAWVRLHESAEGKTTEE 563
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 8/197 (4%)
Query: 294 PVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITPALKGLYHFKKWMNPKFSTT 353
P+TL R L+ + + ++ E F ++ +K + H M+ +
Sbjct: 383 PITLCRRLVQDMHMTDMQVCYGTTETSPVSFMSTRDDPPEQRIKSVGHI---MDHLEAAI 439
Query: 354 TRKVALTWPNSMDSEARIYHY---KKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQV 410
K P + E + Y + Y EE + R D V+ ++G +
Sbjct: 440 VDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQDRWYHTGDIAVMHDNGTISI 499
Query: 411 VGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA--K 468
VGR KDMI+RGGENIYP E+E+F+ H +V + + GVPDER GE V ++L E+A K
Sbjct: 500 VGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHIVGVPDERFGEVVCAWVRLHESAEGK 559
Query: 469 LNADDIRTFCKGKVSKF 485
+DI+ +CKGK++ F
Sbjct: 560 TTEEDIKAWCKGKIAHF 576
>gi|226953998|ref|ZP_03824462.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
sp. ATCC 27244]
gi|226835249|gb|EEH67632.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
sp. ATCC 27244]
Length = 564
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 84/161 (52%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDNAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +G+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDAEGFVKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP + + G+PD R GEE+ I L E+ + N
Sbjct: 468 IEDFLYTHPAICDVQVIGLPDTRYGEELCACIILHEHHQTN 508
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 380 EEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
EE+ V D+AG + D + +G+ ++ GRIKD++IRGGEN++PKEIE+F+ THP
Sbjct: 419 EEKTREVIDNAGW-MHTGDIAEMDAEGFVKIKGRIKDVVIRGGENLFPKEIEDFLYTHPA 477
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
+ + G+PD R GEE+ I L E+ + N + IR FCK +S
Sbjct: 478 ICDVQVIGLPDTRYGEELCACIILHEHHQTNEESIRNFCKEHIS 521
>gi|313213478|emb|CBY40446.1| unnamed protein product [Oikopleura dioica]
Length = 540
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 83/167 (49%), Gaps = 38/167 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD + + V G GE+ IRG C GY+ + +KT E + D W TG
Sbjct: 364 EAKLVDTEHGKTVEMGEKGEMCIRGPCVFKGYFNEPEKTAEVVDEDGWYHTG-------- 415
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E GY ++VGR KDMIIRGGENIYP
Sbjct: 416 -----------------------------DLATMDESGYVKIVGRAKDMIIRGGENIYPA 446
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
E+E F+ HP V++A GVP +R+GEEV ++L A+L A E K
Sbjct: 447 EVESFLLKHPAVVDAQVVGVPSKRLGEEVAAYVRLASGAELTADELK 493
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY ++VGR KDMIIRGGENIYP E+E F+ HP V++A GVP +R+GEEV
Sbjct: 416 DLATMDESGYVKIVGRAKDMIIRGGENIYPAEVESFLLKHPAVVDAQVVGVPSKRLGEEV 475
Query: 458 GISIKLKENAKLNADDIRTF 477
++L A+L AD+++ +
Sbjct: 476 AAYVRLASGAELTADELKQY 495
>gi|404401576|ref|ZP_10993160.1| AMP-binding domain protein [Pseudomonas fuscovaginae UPB0736]
Length = 560
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 75/149 (50%), Gaps = 37/149 (24%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++K++D RIVP G GEL RG+ MLGYW + + T E + W+ TG
Sbjct: 382 LESKIIDEAGRIVPRGEIGELCTRGYSVMLGYWNNPEATAEALDGACWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E GY +VGR KDMIIRGGEN+YP+
Sbjct: 434 -----------------------------DLAVMDEAGYVSIVGRNKDMIIRGGENVYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
EIEEF+ HP V + G+PDER GEE+
Sbjct: 465 EIEEFLFRHPAVADVQVIGIPDERYGEEI 493
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY +VGR KDMIIRGGEN+YP+EIEEF+ HP V + G+PDER GEE+
Sbjct: 434 DLAVMDEAGYVSIVGRNKDMIIRGGENVYPREIEEFLFRHPAVADVQVIGIPDERYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+K + ++++ FCKGK++ F
Sbjct: 494 VAWVKCHPGHDADEEELKVFCKGKIAHF 521
>gi|313237126|emb|CBY12347.1| unnamed protein product [Oikopleura dioica]
Length = 576
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 83/158 (52%), Gaps = 37/158 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+AKV+D N + + G GEL+ +G +GY +DE+KTKE+ D + +TG
Sbjct: 395 EAKVIDENEKTLERGQIGELVTKGFVLFMGYVKDEEKTKESYTKDGYWKTG--------- 445
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+REDG Q+ GR KDM+IRGGENI P E
Sbjct: 446 ----------------------------DLAVVREDGTLQISGRSKDMLIRGGENIQPTE 477
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
IE FI TH VL+ Y GVP R+GEEV I+LK+++
Sbjct: 478 IENFITTHEKVLDCYVIGVPSSRLGEEVAAYIQLKDDS 515
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+REDG Q+ GR KDM+IRGGENI P EIE FI TH VL+ Y GVP R+GEEV
Sbjct: 446 DLAVVREDGTLQISGRSKDMLIRGGENIQPTEIENFITTHEKVLDCYVIGVPSSRLGEEV 505
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+++ + +DI FCK ++++
Sbjct: 506 AAYIQLKDDS-VTKEDIIAFCKDGLARY 532
>gi|294650406|ref|ZP_06727769.1| long-chain-fatty-acid--CoA ligase, partial [Acinetobacter
haemolyticus ATCC 19194]
gi|292823718|gb|EFF82558.1| long-chain-fatty-acid--CoA ligase [Acinetobacter haemolyticus ATCC
19194]
Length = 559
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 84/161 (52%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 380 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDNAGWMHTG--------- 430
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +G+ ++ GRIKD++IRGGEN++PKE
Sbjct: 431 ----------------------------DIAEMDAEGFVKIKGRIKDVVIRGGENLFPKE 462
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP + + G+PD R GEE+ I L E+ + N
Sbjct: 463 IEDFLYTHPAICDVQVIGLPDTRYGEELCACIILHEHHQTN 503
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 380 EEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
EE+ V D+AG + D + +G+ ++ GRIKD++IRGGEN++PKEIE+F+ THP
Sbjct: 414 EEKTREVIDNAGW-MHTGDIAEMDAEGFVKIKGRIKDVVIRGGENLFPKEIEDFLYTHPA 472
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
+ + G+PD R GEE+ I L E+ + N + IR FCK +S
Sbjct: 473 ICDVQVIGLPDTRYGEELCACIILHEHHQTNEESIRNFCKEHIS 516
>gi|108760532|ref|YP_629825.1| AMP-binding protein [Myxococcus xanthus DK 1622]
gi|108464412|gb|ABF89597.1| AMP-binding enzyme [Myxococcus xanthus DK 1622]
Length = 552
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 89/181 (49%), Gaps = 40/181 (22%)
Query: 6 PTDLQFSTLSS--SSFQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
P D + ST+ + KV+D + +VP G+PGEL RG+ MLGYW + + T +
Sbjct: 353 PLDKRVSTVGRVHPHLEVKVIDAGSGEVVPRGSPGELCTRGYSVMLGYWANPEATAAAVD 412
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ TG D V+ ++GY +VVG
Sbjct: 413 AAGWMHTG-------------------------------------DLAVMDDEGYVKVVG 435
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
RIKD IIRGGENI P+E+EEF+ HP V E GVP +R GEEV +++K A L A
Sbjct: 436 RIKDTIIRGGENISPREVEEFLHAHPGVSETQVIGVPSKRYGEEVMAWVRVKPGATLTAE 495
Query: 183 E 183
E
Sbjct: 496 E 496
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ ++GY +VVGRIKD IIRGGENI P+E+EEF+ HP V E GVP +R GEEV
Sbjct: 421 DLAVMDDEGYVKVVGRIKDTIIRGGENISPREVEEFLHAHPGVSETQVIGVPSKRYGEEV 480
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+++K A L A+++ FC G+++ F
Sbjct: 481 MAWVRVKPGATLTAEELTRFCAGRIASF 508
>gi|409425835|ref|ZP_11260412.1| AMP-binding domain protein [Pseudomonas sp. HYS]
Length = 557
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 81/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D IVP G GEL RG+ MLGYW + T E I P
Sbjct: 369 ELRVTTVGRTQPQLESKIIDEQGCIVPRGQIGELCTRGYSVMLGYWGNPAATSEAIDPAG 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + E GY + GR K
Sbjct: 429 WMHTG-------------------------------------DLATMNEAGYVCIAGRNK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+PDER GEE+ IK
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKF 499
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 55/88 (62%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY + GR KDMIIRGGENIYP+E+EEF THP V + G+PDER GEE+
Sbjct: 434 DLATMNEAGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK + +++ +CK +++ F
Sbjct: 494 VAWIKFHPGHSASEIELQQWCKSRIAHF 521
>gi|264676637|ref|YP_003276543.1| AMP-dependent synthetase/ligase [Comamonas testosteroni CNB-2]
gi|262207149|gb|ACY31247.1| AMP-dependent synthetase and ligase [Comamonas testosteroni CNB-2]
Length = 587
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 82/166 (49%), Gaps = 38/166 (22%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD I+P G GEL RG+ M GYWEDE +T+E I ++W+ TG
Sbjct: 406 LEVKIVDPSTGEIMPPGQSGELCTRGYSVMHGYWEDEARTREAIDAEQWMHTG------- 458
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + +GY +VGRIKDM+IRGGENIYP
Sbjct: 459 ------------------------------DLATMDGEGYVNIVGRIKDMVIRGGENIYP 488
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
+EIEEF+ HP V + GVPD R GEE+ I +K +L E
Sbjct: 489 REIEEFLYRHPKVQDVQVVGVPDVRYGEELCAWIIVKPGQELGEEE 534
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGRIKDM+IRGGENIYP+EIEEF+ HP V + GVPD R GEE+
Sbjct: 459 DLATMDGEGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPKVQDVQVVGVPDVRYGEEL 518
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I +K +L +++R FCKG+++ +
Sbjct: 519 CAWIIVKPGQELGEEEVRDFCKGQIAHY 546
>gi|77360337|ref|YP_339912.1| AMP-binding protein [Pseudoalteromonas haloplanktis TAC125]
gi|76875248|emb|CAI86469.1| putative long-chain-fatty-acid-CoA ligase [Pseudoalteromonas
haloplanktis TAC125]
Length = 577
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 83/161 (51%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D I P G GE+ RG M YW DE+KTK TI D WL +G
Sbjct: 400 EVKIIDELGNIQPVGQSGEVCSRGAGIMRCYWNDEEKTKATIDQDGWLHSG--------- 450
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ +G+ +VGRIKDMIIRGGENIYP+E
Sbjct: 451 ----------------------------DLGVMDSEGFVSIVGRIKDMIIRGGENIYPRE 482
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + T+P V +A +G+ DE+ GEEV I+ KE++ L+
Sbjct: 483 IEEVLYTYPGVQDAAIFGISDEKYGEEVCAWIQPKEDSVLD 523
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +G+ +VGRIKDMIIRGGENIYP+EIEE + T+P V +A +G+ DE+ GEEV
Sbjct: 451 DLGVMDSEGFVSIVGRIKDMIIRGGENIYPREIEEVLYTYPGVQDAAIFGISDEKYGEEV 510
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+ KE++ L+ + IR F K K++ F
Sbjct: 511 CAWIQPKEDSVLDEEQIRLFLKDKLAYF 538
>gi|254467693|ref|ZP_05081101.1| acyl-CoA synthase [Rhodobacterales bacterium Y4I]
gi|206684267|gb|EDZ44752.1| acyl-CoA synthase [Rhodobacterales bacterium Y4I]
Length = 567
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 83/162 (51%), Gaps = 38/162 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K VD R VP G GELL+RG+ M GYW+D + T + D W+RTG
Sbjct: 393 LEVKAVDGAGRTVPAGERGELLVRGYSVMQGYWDDPEATGGAVR-DGWMRTG-------- 443
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
+G F DQ G+ + GR+KDMIIRGGENIYP+
Sbjct: 444 -------------------DLGSF----DDQ------GFCSITGRVKDMIIRGGENIYPR 474
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP++ +A +GVPDE+ GE+V + A L+
Sbjct: 475 EIEEFLIRHPDIADAQVFGVPDEKFGEQVCAWVVAAAGASLD 516
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 59/82 (71%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
+ G+ + GR+KDMIIRGGENIYP+EIEEF+ HP++ +A +GVPDE+ GE+V +
Sbjct: 450 DQGFCSITGRVKDMIIRGGENIYPREIEEFLIRHPDIADAQVFGVPDEKFGEQVCAWVVA 509
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
A L+ + +R+ C+G+++ F
Sbjct: 510 AAGASLDEEAVRSHCRGQIAHF 531
>gi|443702072|gb|ELU00234.1| hypothetical protein CAPTEDRAFT_220839 [Capitella teleta]
Length = 603
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 81/166 (48%), Gaps = 37/166 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ KVVD RIVP T GEL IRG+ M Y++DE T E +G DRW +TG
Sbjct: 426 EVKVVDREGRIVPVNTEGELCIRGYVVMHSYYQDEAATVEVLGSDRWYKTG--------- 476
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + E Y ++VGRIKD+IIRGGENIYP E
Sbjct: 477 ----------------------------DLATMDEHSYAKIVGRIKDLIIRGGENIYPLE 508
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
+E+ + + + + GVPD R+ E+V IKLKE A E K
Sbjct: 509 VEQVLYENSKIEDVQVVGVPDPRLQEQVCAWIKLKEGQTATADEIK 554
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E Y ++VGRIKD+IIRGGENIYP E+E+ + + + + GVPD R+ E+V
Sbjct: 477 DLATMDEHSYAKIVGRIKDLIIRGGENIYPLEVEQVLYENSKIEDVQVVGVPDPRLQEQV 536
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKLKE AD+I+ FCKGK+S F
Sbjct: 537 CAWIKLKEGQTATADEIKEFCKGKLSYF 564
>gi|189424453|ref|YP_001951630.1| AMP-binding domain-containing protein [Geobacter lovleyi SZ]
gi|189420712|gb|ACD95110.1| AMP-dependent synthetase and ligase [Geobacter lovleyi SZ]
Length = 549
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 95/184 (51%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSSSSFQA--KVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ ST+ + +A K++D +P G GEL RG+ M GY++ ++T + I
Sbjct: 354 DPVELRVSTVGRALPEAEVKIIDIETGATLPPGKQGELCARGYMVMKGYYKMPEETAKVI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D ++ E+GY ++
Sbjct: 414 DADNWLHTG-------------------------------------DLAIMDENGYCKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIK MIIRGGENIYPKEIEEF+ THP + + YGVPD++ GE+V ++ LK+ ++
Sbjct: 437 GRIKQMIIRGGENIYPKEIEEFLYTHPKISDVQIYGVPDKKYGEQVMAAVILKKGMEMTE 496
Query: 182 YEDK 185
E K
Sbjct: 497 EEVK 500
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 77/119 (64%), Gaps = 3/119 (2%)
Query: 369 ARIYHYKK--YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIY 426
AR Y K Y EE V D A + D ++ E+GY ++ GRIK MIIRGGENIY
Sbjct: 393 ARGYMVMKGYYKMPEETAKVID-ADNWLHTGDLAIMDENGYCKITGRIKQMIIRGGENIY 451
Query: 427 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
PKEIEEF+ THP + + YGVPD++ GE+V ++ LK+ ++ ++++ FC+GK++ +
Sbjct: 452 PKEIEEFLYTHPKISDVQIYGVPDKKYGEQVMAAVILKKGMEMTEEEVKEFCRGKIANY 510
>gi|430756205|ref|YP_007209465.1| hypothetical protein A7A1_0713 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|430020725|gb|AGA21331.1| Hypothetical protein YngI [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 549
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 66/91 (72%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
+F D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP +L+ GVPD +
Sbjct: 419 LFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPAILDVQVVGVPDAKF 478
Query: 454 GEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
GEE IKLK+ ++ D+++ +CKGK+++
Sbjct: 479 GEEAAAWIKLKDGKSVSPDELKAYCKGKIAR 509
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 78/153 (50%), Gaps = 37/153 (24%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY++D+ T++ I D WL TG
Sbjct: 386 GMQGELCTRGYHVMKGYYKDKDATRKAINHDGWLFTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP +L+
Sbjct: 423 --------------DLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPAILDV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
GVPD + GEE IKLK+ ++ E K+
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKSVSPDELKA 501
>gi|148547015|ref|YP_001267117.1| AMP-binding domain-containing protein [Pseudomonas putida F1]
gi|148511073|gb|ABQ77933.1| AMP-dependent synthetase and ligase [Pseudomonas putida F1]
Length = 560
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 87/178 (48%), Gaps = 39/178 (21%)
Query: 8 DLQFSTLSSSSFQA--KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + Q K+VD + I+ G GEL RG+ MLGYW++ Q T + I P
Sbjct: 369 ELRVTTVGRTQPQLENKLVDADGCIIARGEIGELCTRGYSVMLGYWDNPQATADAIDPAG 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ +G D V+ E GY ++VGR K
Sbjct: 429 WMHSG-------------------------------------DLAVMDEQGYVRIVGRNK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
DMIIRGGENIYP+E+EEF THP V +A G+P R GEE+ IKL A E
Sbjct: 452 DMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIKLHPGHSATAEE 509
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V +A G+P R GEE+
Sbjct: 434 DLAVMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKL A++++ +CK +++ F
Sbjct: 494 VAWIKLHPGHSATAEELQGWCKARIAHF 521
>gi|445449054|ref|ZP_21444146.1| AMP-binding enzyme [Acinetobacter baumannii WC-A-92]
gi|444757264|gb|ELW81792.1| AMP-binding enzyme [Acinetobacter baumannii WC-A-92]
Length = 564
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 385 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + ++G+ ++ GRIKD++IRGGEN++PKE
Sbjct: 436 ----------------------------DIAEMDQEGFIKIKGRIKDVVIRGGENLFPKE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 468 IEDFLYTHPDVSDVQVIGLPDPKYGEELCACIILHEHHQVD 508
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ +G+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 419 EEKTREVIDAAGWMHTGDIAEMDQ-----EGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 473
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 474 THPDVSDVQVIGLPDPKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 521
>gi|395776250|ref|ZP_10456765.1| AMP-binding domain protein [Streptomyces acidiscabies 84-104]
Length = 496
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 76/150 (50%), Gaps = 38/150 (25%)
Query: 19 FQAKVVDHNNRIV-PFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + P G GEL RG+ MLGYW + +T E+I RW+ TG
Sbjct: 324 VEVKIVDPATGVTQPRGRAGELCTRGYSVMLGYWNEPSRTAESIDAGRWMHTG------- 376
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+REDGY ++VGRIKDMIIRGGENIYP
Sbjct: 377 ------------------------------DLGVMREDGYVEIVGRIKDMIIRGGENIYP 406
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
+EIEEF+ HP + + GVP E GEEV
Sbjct: 407 REIEEFLYAHPKIRDVQIVGVPHETYGEEV 436
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
AGR + D V+REDGY ++VGRIKDMIIRGGENIYP+EIEEF+ HP + + GVP
Sbjct: 369 AGRWMHTGDLGVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIRDVQIVGVP 428
Query: 450 DERMGEEV-GISIKLKENAKLNADDIRTFCKGKVSKF 485
E GEEV I D+IR +C G+++ +
Sbjct: 429 HETYGEEVLACVIPHDAGDPPTLDEIRGYCAGRLAHY 465
>gi|71994694|ref|NP_001023938.1| Protein ACS-1, isoform b [Caenorhabditis elegans]
gi|351063225|emb|CCD71311.1| Protein ACS-1, isoform b [Caenorhabditis elegans]
Length = 597
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 37/166 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A +VD N IVP G GE+++RG+ M YW E++TK+ I DRW TG
Sbjct: 409 LEAAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQDRWYHTG-------- 460
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ ++G +VGR KDMI+RGGENIYP
Sbjct: 461 -----------------------------DIAVMHDNGTISIVGRSKDMIVRGGENIYPT 491
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
E+E+F+ H +V + + GVPDER GE V ++L E+A+ E+
Sbjct: 492 EVEQFLFKHQSVEDVHIVGVPDERFGEVVCAWVRLHESAEGKTTEE 537
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 8/197 (4%)
Query: 294 PVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITPALKGLYHFKKWMNPKFSTT 353
P+TL R L+ + + ++ E F ++ +K + H M+ +
Sbjct: 357 PITLCRRLVQDMHMTDMQVCYGTTETSPVSFMSTRDDPPEQRIKSVGHI---MDHLEAAI 413
Query: 354 TRKVALTWPNSMDSEARIYHY---KKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQV 410
K P + E + Y + Y EE + R D V+ ++G +
Sbjct: 414 VDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQDRWYHTGDIAVMHDNGTISI 473
Query: 411 VGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA--K 468
VGR KDMI+RGGENIYP E+E+F+ H +V + + GVPDER GE V ++L E+A K
Sbjct: 474 VGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHIVGVPDERFGEVVCAWVRLHESAEGK 533
Query: 469 LNADDIRTFCKGKVSKF 485
+DI+ +CKGK++ F
Sbjct: 534 TTEEDIKAWCKGKIAHF 550
>gi|338529851|ref|YP_004663185.1| AMP-binding domain-containing protein [Myxococcus fulvus HW-1]
gi|337255947|gb|AEI62107.1| AMP-binding domain protein [Myxococcus fulvus HW-1]
Length = 549
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 87/181 (48%), Gaps = 40/181 (22%)
Query: 6 PTDLQFSTLSS--SSFQAKVVDHN-NRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
P D + ST+ + KV+D +VP G PGEL RG+ MLGYW + + T +
Sbjct: 350 PLDKRVSTVGRVHPHLEVKVIDAGTGEVVPRGAPGELCTRGYSVMLGYWANPEATAAAVD 409
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ TG D V+ E+GY +VVG
Sbjct: 410 AAGWMHTG-------------------------------------DLAVMDEEGYVKVVG 432
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
RIKD IIRGGENI P+E+EEF+ THP V E GVP ++ GEEV +++K A L
Sbjct: 433 RIKDTIIRGGENISPREVEEFLHTHPGVSETQVIGVPSQKYGEEVMAWVRVKPGAALTGE 492
Query: 183 E 183
E
Sbjct: 493 E 493
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY +VVGRIKD IIRGGENI P+E+EEF+ THP V E GVP ++ GEEV
Sbjct: 418 DLAVMDEEGYVKVVGRIKDTIIRGGENISPREVEEFLHTHPGVSETQVIGVPSQKYGEEV 477
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+++K A L +++ FC G+++ F
Sbjct: 478 MAWVRVKPGAALTGEELTRFCSGRIASF 505
>gi|39933535|ref|NP_945811.1| AMP-binding protein [Rhodopseudomonas palustris CGA009]
gi|39647381|emb|CAE25902.1| possible fatty acid-CoA ligases [Rhodopseudomonas palustris CGA009]
Length = 517
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 90/179 (50%), Gaps = 39/179 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + ST+ + KVVD + +IVP G GEL RG+ MLGYW++ +KT + +
Sbjct: 321 DPEDRRVSTVGRIHPHVEVKVVDLDGKIVPRGQRGELCTRGYSVMLGYWDEAEKTADVLD 380
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ TG D + ++G+ +VG
Sbjct: 381 AAGWMHTG-------------------------------------DLATIDDEGFCNIVG 403
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
RIKDM+IRGGEN+YP+EIEEF+ HP + + +GV D+R GEE+ ++ + L A
Sbjct: 404 RIKDMVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADDRYGEELCAWVRPRPGETLTA 462
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 69/103 (66%), Gaps = 1/103 (0%)
Query: 381 EENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
E+ V D+AG + D + ++G+ +VGRIKDM+IRGGEN+YP+EIEEF+ HP +
Sbjct: 373 EKTADVLDAAG-WMHTGDLATIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKI 431
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
+ +GV D+R GEE+ ++ + L ADD+R FC+G+++
Sbjct: 432 QDVQIFGVADDRYGEELCAWVRPRPGETLTADDVRAFCQGQIA 474
>gi|307731457|ref|YP_003908681.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1003]
gi|307585992|gb|ADN59390.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1003]
Length = 576
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 87/181 (48%), Gaps = 40/181 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + K++D +VP G GEL RG+ M GYW DE+KT+E++
Sbjct: 381 DPLDKRTTTVGRIQPHLEVKIIDSLGNVVPVGEIGELCTRGYSVMQGYWGDEEKTRESV- 439
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D L +GY +VG
Sbjct: 440 VDGWMHTG-------------------------------------DLATLDAEGYCNIVG 462
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV + L A
Sbjct: 463 RLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDAKYGEEVCAWVVLHAGEHATAE 522
Query: 183 E 183
E
Sbjct: 523 E 523
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L +GY +VGR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPD + GEEV
Sbjct: 448 DLATLDAEGYCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDAKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ L A++I+ FC G+++ +
Sbjct: 508 CAWVVLHAGEHATAEEIQQFCHGQIAHY 535
>gi|441509013|ref|ZP_20990935.1| putative fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
gi|441447018|dbj|GAC48896.1| putative fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
Length = 547
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 95/196 (48%), Gaps = 48/196 (24%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + KV+D +P G GE RG+ M GYW + +KT E +
Sbjct: 354 DPLELRVGTVGRVGPHLEIKVIDPITGDTLPRGETGEFCTRGYSVMDGYWNEPEKTAEAL 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ TG D V+ + Y ++
Sbjct: 414 DADGWMHTG-------------------------------------DLAVMDPNSYVRIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN-AKLN 180
GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDER GEE+ ++L++ A L
Sbjct: 437 GRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDERYGEELMAWVQLRDGVADLT 496
Query: 181 AYEDKSISSDYHEFET 196
A D EF T
Sbjct: 497 A-------DDIREFAT 505
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ + Y ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDER GEE+
Sbjct: 423 DLAVMDPNSYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDERYGEEL 482
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSK 484
++L++ A L ADDIR F GK+++
Sbjct: 483 MAWVQLRDGVADLTADDIREFATGKIAR 510
>gi|71994703|ref|NP_001023939.1| Protein ACS-1, isoform c [Caenorhabditis elegans]
gi|351063226|emb|CCD71312.1| Protein ACS-1, isoform c [Caenorhabditis elegans]
Length = 578
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 37/166 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A +VD N IVP G GE+++RG+ M YW E++TK+ I DRW TG
Sbjct: 390 LEAAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQDRWYHTG-------- 441
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ ++G +VGR KDMI+RGGENIYP
Sbjct: 442 -----------------------------DIAVMHDNGTISIVGRSKDMIVRGGENIYPT 472
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
E+E+F+ H +V + + GVPDER GE V ++L E+A+ E+
Sbjct: 473 EVEQFLFKHQSVEDVHIVGVPDERFGEVVCAWVRLHESAEGKTTEE 518
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 8/197 (4%)
Query: 294 PVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITPALKGLYHFKKWMNPKFSTT 353
P+TL R L+ + + ++ E F ++ +K + H M+ +
Sbjct: 338 PITLCRRLVQDMHMTDMQVCYGTTETSPVSFMSTRDDPPEQRIKSVGHI---MDHLEAAI 394
Query: 354 TRKVALTWPNSMDSEARIYHY---KKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQV 410
K P + E + Y + Y EE + R D V+ ++G +
Sbjct: 395 VDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQDRWYHTGDIAVMHDNGTISI 454
Query: 411 VGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA--K 468
VGR KDMI+RGGENIYP E+E+F+ H +V + + GVPDER GE V ++L E+A K
Sbjct: 455 VGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHIVGVPDERFGEVVCAWVRLHESAEGK 514
Query: 469 LNADDIRTFCKGKVSKF 485
+DI+ +CKGK++ F
Sbjct: 515 TTEEDIKAWCKGKIAHF 531
>gi|441513325|ref|ZP_20995156.1| putative fatty-acid--CoA ligase [Gordonia amicalis NBRC 100051]
gi|441451942|dbj|GAC53117.1| putative fatty-acid--CoA ligase [Gordonia amicalis NBRC 100051]
Length = 551
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 80/154 (51%), Gaps = 37/154 (24%)
Query: 37 GELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQ 96
GEL RG+ M GYW D +KT E I D W+ TG
Sbjct: 392 GELCTRGYSVMTGYWNDPEKTAEAIDADGWMHTG-------------------------- 425
Query: 97 QQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAY 156
D + + GY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A
Sbjct: 426 -----------DLAEMDDAGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVI 474
Query: 157 GVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
GVPDE+ GEE+ ++L+++A ED +D
Sbjct: 475 GVPDEKYGEELMAWVRLRDHATDLTAEDVRAFAD 508
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Query: 406 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
GY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+ ++L++
Sbjct: 434 GYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWVRLRD 493
Query: 466 NAK-LNADDIRTFCKGKVSK 484
+A L A+D+R F GK+++
Sbjct: 494 HATDLTAEDVRAFADGKIAR 513
>gi|392539101|ref|ZP_10286238.1| AMP-binding domain protein [Pseudoalteromonas marina mano4]
Length = 577
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 82/161 (50%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D I G PGE+ +G M YW DE+KTK TI D WL +G
Sbjct: 400 EVKIIDELGNIQKIGLPGEVCSKGVGTMRCYWNDEEKTKATIDSDGWLHSG--------- 450
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ +G+ +VGRIKDMIIRGGEN+YP+E
Sbjct: 451 ----------------------------DLGVMDSEGFVSIVGRIKDMIIRGGENVYPRE 482
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + T+P + +A +G+ DE+ GEEV I+ KE+ L+
Sbjct: 483 IEEVLYTYPGIQDAAVFGISDEKYGEEVCAWIQPKEDTTLD 523
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 380 EEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
EE+ DS G + D V+ +G+ +VGRIKDMIIRGGEN+YP+EIEE + T+P
Sbjct: 434 EEKTKATIDSDGW-LHSGDLGVMDSEGFVSIVGRIKDMIIRGGENVYPREIEEVLYTYPG 492
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ +A +G+ DE+ GEEV I+ KE+ L+ IR F + K++ F
Sbjct: 493 IQDAAVFGISDEKYGEEVCAWIQPKEDTTLDEQAIRAFLQDKLAYF 538
>gi|354478459|ref|XP_003501432.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Cricetulus griseus]
gi|344252178|gb|EGW08282.1| Acyl-CoA synthetase family member 2, mitochondrial [Cricetulus
griseus]
Length = 615
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 84/170 (49%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ + TPGEL IRG+C M GYW + QKT ET+G D+W RTG
Sbjct: 441 EAQIVNMETGELTKLNTPGELYIRGYCVMQGYWGEPQKTFETVGQDKWYRTG-------- 492
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E G+ ++VGR KDMIIRGGENIYP
Sbjct: 493 -----------------------------DIATMDEQGFCKIVGRSKDMIIRGGENIYPA 523
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F HP V E GV D+RMGEE+ I+LK E K+
Sbjct: 524 ELEDFFHKHPQVQEVQVVGVKDQRMGEEICACIRLKSGETTTEEEIKAFC 573
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F HP V E GV D+RMGEE+
Sbjct: 493 DIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHKHPQVQEVQVVGVKDQRMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK ++I+ FCKGK+S F
Sbjct: 553 CACIRLKSGETTTEEEIKAFCKGKISHF 580
>gi|403340800|gb|EJY69695.1| Long-chain-fatty-acid--CoA ligase [Oxytricha trifallax]
Length = 542
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 79/151 (52%), Gaps = 37/151 (24%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
+G PGE+ RG+ M GY+ D ++T+E + P W+RTG
Sbjct: 367 WGEPGEVCARGYVVMTGYFNDAKRTQEAVCPKGWIRTG---------------------- 404
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
+G F +DG+ +++GR KDMIIRGGENIYPKEIEE+ HPNV +
Sbjct: 405 -----DLGQF----------DDDGFLKIIGRSKDMIIRGGENIYPKEIEEYFMKHPNVSD 449
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
GV DE MGEEV IKLKE+ K E
Sbjct: 450 VQVVGVSDELMGEEVCAWIKLKESGKTTPQE 480
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
+DG+ +++GR KDMIIRGGENIYPKEIEE+ HPNV + GV DE MGEEV IKL
Sbjct: 411 DDGFLKIIGRSKDMIIRGGENIYPKEIEEYFMKHPNVSDVQVVGVSDELMGEEVCAWIKL 470
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
KE+ K + +CKG++S +
Sbjct: 471 KESGKTTPQEFLDYCKGQISHY 492
>gi|341880983|gb|EGT36918.1| hypothetical protein CAEBREN_11693 [Caenorhabditis brenneri]
Length = 597
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 37/166 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A +VD N IVP G GE+++RG+ M YW E++TK+ I DRW TG
Sbjct: 409 LEAAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQDRWYHTG-------- 460
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ ++G +VGR KDMI+RGGENIYP
Sbjct: 461 -----------------------------DIAVMHDNGTISIVGRSKDMIVRGGENIYPT 491
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
E+E+F+ H +V + + GVPDER GE V ++L E+A+ E+
Sbjct: 492 EVEQFLFKHQSVEDVHIVGVPDERFGEVVCAWVRLHESAEGKTTEE 537
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 8/197 (4%)
Query: 294 PVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITPALKGLYHFKKWMNPKFSTT 353
P+TL R L+ + + ++ E F ++ +K + H M+ +
Sbjct: 357 PITLCRRLVQDMHMTDMQVCYGTTETSPVSFMSTRDDPPEQRIKSVGHI---MDHLEAAI 413
Query: 354 TRKVALTWPNSMDSEARIYHY---KKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQV 410
K P + E + Y + Y EE + R D V+ ++G +
Sbjct: 414 VDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQDRWYHTGDIAVMHDNGTISI 473
Query: 411 VGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA--K 468
VGR KDMI+RGGENIYP E+E+F+ H +V + + GVPDER GE V ++L E+A K
Sbjct: 474 VGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHIVGVPDERFGEVVCAWVRLHESAEGK 533
Query: 469 LNADDIRTFCKGKVSKF 485
+DI+ +CKGK++ F
Sbjct: 534 TTEEDIKAWCKGKIAHF 550
>gi|307352961|ref|YP_003894012.1| AMP-dependent synthetase and ligase [Methanoplanus petrolearius DSM
11571]
gi|307156194|gb|ADN35574.1| AMP-dependent synthetase and ligase [Methanoplanus petrolearius DSM
11571]
Length = 565
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 90/171 (52%), Gaps = 38/171 (22%)
Query: 20 QAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD +IV G PGE+ RG+ M Y+ + T++TI DRW TG
Sbjct: 382 ELKIVDPVTQKIVSRGEPGEICARGYVVMKCYYNNPSATRQTIDSDRWNHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D ++ +DGY ++VGR+K+M+IRGGENIYP+
Sbjct: 434 -----------------------------DLGIMDDDGYFRIVGRLKEMVIRGGENIYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISS 189
EIEEF+ T+P + + Y GVPDE+ GEE+ +K+K+N +L E K +
Sbjct: 465 EIEEFLHTNPKIEDVYIIGVPDEKYGEELMAWVKVKDNQQLTGDEIKEFCN 515
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 75/104 (72%), Gaps = 7/104 (6%)
Query: 389 SAGRSIFEKDQF-------VLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVL 441
SA R + D++ ++ +DGY ++VGR+K+M+IRGGENIYP+EIEEF+ T+P +
Sbjct: 418 SATRQTIDSDRWNHTGDLGIMDDDGYFRIVGRLKEMVIRGGENIYPREIEEFLHTNPKIE 477
Query: 442 EAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ Y GVPDE+ GEE+ +K+K+N +L D+I+ FC GK++++
Sbjct: 478 DVYIIGVPDEKYGEELMAWVKVKDNQQLTGDEIKEFCNGKIARY 521
>gi|268558570|ref|XP_002637276.1| Hypothetical protein CBG18959 [Caenorhabditis briggsae]
Length = 624
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 84/166 (50%), Gaps = 37/166 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A +VD N IVP G GE+++RG+ M YW E++TK+ I DRW TG
Sbjct: 436 LEAAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQDRWYHTG-------- 487
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ ++G +VGR KDMI+RGGENIYP
Sbjct: 488 -----------------------------DIAVMHDNGTISIVGRSKDMIVRGGENIYPT 518
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
E+E+F+ H V + + GVPDER GE V ++L E+A+ E+
Sbjct: 519 EVEQFLFKHQAVEDVHIVGVPDERFGEVVCAWVRLHESAEGKTTEE 564
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 8/197 (4%)
Query: 294 PVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITPALKGLYHFKKWMNPKFSTT 353
P+TL R L+ + + ++ E F ++ +K + H M+ +
Sbjct: 384 PITLCRRLVQDMHMTDMQVCYGTTETSPVSFMSTRDDPPEQRIKSVGHI---MDHLEAAI 440
Query: 354 TRKVALTWPNSMDSEARIYHY---KKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQV 410
K P + E + Y + Y EE + R D V+ ++G +
Sbjct: 441 VDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQDRWYHTGDIAVMHDNGTISI 500
Query: 411 VGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA--K 468
VGR KDMI+RGGENIYP E+E+F+ H V + + GVPDER GE V ++L E+A K
Sbjct: 501 VGRSKDMIVRGGENIYPTEVEQFLFKHQAVEDVHIVGVPDERFGEVVCAWVRLHESAEGK 560
Query: 469 LNADDIRTFCKGKVSKF 485
+DI+ +CKGK++ F
Sbjct: 561 TTEEDIKAWCKGKIAHF 577
>gi|397696067|ref|YP_006533950.1| acyl-CoA synthetase [Pseudomonas putida DOT-T1E]
gi|397332797|gb|AFO49156.1| acyl-CoA synthetase [Pseudomonas putida DOT-T1E]
Length = 560
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 85/168 (50%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSSFQA--KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + Q K+VD + IV G GEL RG+ MLGYW++ Q T + I P
Sbjct: 369 ELRVTTVGRTQPQLENKLVDTDGCIVARGEIGELCTRGYSVMLGYWDNPQATADAIDPAG 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ +G D V+ E GY ++VGR K
Sbjct: 429 WMHSG-------------------------------------DLAVMDEQGYVRIVGRNK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V +A G+P R GEE+ IKL
Sbjct: 452 DMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIKL 499
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V +A G+P R GEE+
Sbjct: 434 DLAVMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKL ++++ +CK +++ F
Sbjct: 494 VAWIKLHPGHSATTEELQGWCKARIAHF 521
>gi|392961068|ref|ZP_10326531.1| AMP-dependent synthetase and ligase [Pelosinus fermentans DSM
17108]
gi|421055058|ref|ZP_15518022.1| AMP-dependent synthetase and ligase [Pelosinus fermentans B4]
gi|421061347|ref|ZP_15523690.1| AMP-dependent synthetase and ligase [Pelosinus fermentans B3]
gi|421065469|ref|ZP_15527215.1| AMP-dependent synthetase and ligase [Pelosinus fermentans A12]
gi|421071938|ref|ZP_15533051.1| AMP-dependent synthetase and ligase [Pelosinus fermentans A11]
gi|392440161|gb|EIW17849.1| AMP-dependent synthetase and ligase [Pelosinus fermentans B4]
gi|392446526|gb|EIW23811.1| AMP-dependent synthetase and ligase [Pelosinus fermentans A11]
gi|392450033|gb|EIW27088.1| AMP-dependent synthetase and ligase [Pelosinus fermentans B3]
gi|392454319|gb|EIW31156.1| AMP-dependent synthetase and ligase [Pelosinus fermentans DSM
17108]
gi|392458841|gb|EIW35326.1| AMP-dependent synthetase and ligase [Pelosinus fermentans A12]
Length = 546
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 92/184 (50%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ +T+ + + + K++D N + VP T GEL RG+ M GY++ + T I
Sbjct: 354 DPLELRVTTVGRALPNVEVKIIDPENGKEVPVNTQGELCCRGYNTMKGYYKMIEATAAAI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D V+ E+GY ++
Sbjct: 414 DNDGWLHTG-------------------------------------DLAVMDENGYCKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEFI THP V + GVP E+ GEEV I++K +
Sbjct: 437 GRLKDMIIRGGENIYPREIEEFIYTHPKVKDVQVVGVPSEKYGEEVMAFIQIKPGNSITE 496
Query: 182 YEDK 185
E K
Sbjct: 497 EELK 500
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY ++ GR+KDMIIRGGENIYP+EIEEFI THP V + GVP E+ GEEV
Sbjct: 423 DLAVMDENGYCKITGRLKDMIIRGGENIYPREIEEFIYTHPKVKDVQVVGVPSEKYGEEV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I++K + ++++ +C+ ++++
Sbjct: 483 MAFIQIKPGNSITEEELKEYCRENIARY 510
>gi|313245546|emb|CBY40244.1| unnamed protein product [Oikopleura dioica]
Length = 578
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 82/158 (51%), Gaps = 37/158 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
QAK++D + VP GT GEL +G+ GY DE+KTKE+ D + +TG
Sbjct: 397 QAKILDKDGNTVPKGTIGELCTKGYFVFNGYINDEEKTKESFTEDGFFKTG--------- 447
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D +LREDG ++ GR KD+IIRGGENI P E
Sbjct: 448 ----------------------------DLAMLREDGMIKITGREKDLIIRGGENIQPTE 479
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
IE+FI P VL+ Y GVP R+GEEV I+LK+++
Sbjct: 480 IEDFINEMPEVLDCYVIGVPSSRLGEEVAAYIQLKDDS 517
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D +LREDG ++ GR KD+IIRGGENI P EIE+FI P VL+ Y GVP R+GEEV
Sbjct: 448 DLAMLREDGMIKITGREKDLIIRGGENIQPTEIEDFINEMPEVLDCYVIGVPSSRLGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+++ + +DI FCK ++++
Sbjct: 508 AAYIQLKDDS-VTKEDITAFCKDGLARY 534
>gi|149370391|ref|ZP_01890080.1| acyl-CoA synthase [unidentified eubacterium SCB49]
gi|149355942|gb|EDM44499.1| acyl-CoA synthase [unidentified eubacterium SCB49]
Length = 540
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 89/181 (49%), Gaps = 40/181 (22%)
Query: 6 PTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
P D Q ST+ + + K+++ N I P G GEL +RG+ MLGYW + + T+E I
Sbjct: 350 PLDKQVSTVGTVMEHLEVKIINPENGNIQPIGEEGELCVRGYSVMLGYWNNIETTQEVID 409
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
RW+ +G D V+ ++GY + G
Sbjct: 410 NARWMHSG-------------------------------------DLAVMDDEGYVCISG 432
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
RIKD+IIRGGENI PK IE+F+ THP VL+ GVP E+ GEE+ +KL + +
Sbjct: 433 RIKDLIIRGGENISPKSIEDFLYTHPKVLDIQIIGVPSEKYGEEIMAWVKLHHGVQCSDS 492
Query: 183 E 183
E
Sbjct: 493 E 493
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 386 VPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYA 445
V D+A R + D V+ ++GY + GRIKD+IIRGGENI PK IE+F+ THP VL+
Sbjct: 407 VIDNA-RWMHSGDLAVMDDEGYVCISGRIKDLIIRGGENISPKSIEDFLYTHPKVLDIQI 465
Query: 446 YGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
GVP E+ GEE+ +KL + + ++ FCK +++ +
Sbjct: 466 IGVPSEKYGEEIMAWVKLHHGVQCSDSELLAFCKNQIAHY 505
>gi|338999710|ref|ZP_08638348.1| acyl-CoA synthetase [Halomonas sp. TD01]
gi|338763390|gb|EGP18384.1| acyl-CoA synthetase [Halomonas sp. TD01]
Length = 567
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 84/167 (50%), Gaps = 38/167 (22%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
++K+VD N I+P G GEL RG+ ML YW +++ T E I W+ TG
Sbjct: 387 LESKIVDPGNGGILPRGEIGELCTRGYSVMLKYWNNDKATTEAIDEAGWMHTG------- 439
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + E+GY Q+VGRIKDM+IRGGEN+YP
Sbjct: 440 ------------------------------DLATMDEEGYIQIVGRIKDMVIRGGENVYP 469
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
KEIEEF+ HP + E GVPD++ GEE+ +KL +A ED
Sbjct: 470 KEIEEFLYAHPAISEVQVTGVPDKKYGEELIAWVKLNSSAGDVTGED 516
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY Q+VGRIKDM+IRGGEN+YPKEIEEF+ HP + E GVPD++ GEE+
Sbjct: 440 DLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYAHPAISEVQVTGVPDKKYGEEL 499
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
+KL +A + +D+R +CKGK++ F
Sbjct: 500 IAWVKLNSSAGDVTGEDLREYCKGKITHF 528
>gi|291405797|ref|XP_002719337.1| PREDICTED: acyl-CoA synthetase family member 2 [Oryctolagus
cuniculus]
Length = 615
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 79/162 (48%), Gaps = 37/162 (22%)
Query: 27 NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRR 86
++ TPGEL IRG+C M GYW++ QKT E + D+W RTG
Sbjct: 449 TGKLAKLNTPGELCIRGYCVMQGYWDEPQKTLEAVSQDKWYRTG---------------- 492
Query: 87 KLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 146
D + E G+ ++VGR KDMIIRGGENIYP E+E+F T
Sbjct: 493 ---------------------DIASMDEQGFCRIVGRSKDMIIRGGENIYPAELEDFFHT 531
Query: 147 HPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
HP V E GV D RMGEE+ I+LK + E K+
Sbjct: 532 HPQVQEVQVVGVKDHRMGEEICACIRLKSGQTVTEEEIKAFC 573
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 57/82 (69%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D RMGEE+ I+L
Sbjct: 499 EQGFCRIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDHRMGEEICACIRL 558
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
K + ++I+ FCKGK+S F
Sbjct: 559 KSGQTVTEEEIKAFCKGKISHF 580
>gi|388569103|ref|ZP_10155510.1| FadD3 protein [Hydrogenophaga sp. PBC]
gi|388263662|gb|EIK89245.1| FadD3 protein [Hydrogenophaga sp. PBC]
Length = 564
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 89/186 (47%), Gaps = 39/186 (20%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + ST+ + K+VD + R VP GT GE RG+ M GYW D +KT E I
Sbjct: 368 DPLERRVSTVGRVQPHLEIKIVDADGRTVPRGTVGEFCTRGYSVMQGYWGDAEKTAEAID 427
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
+ W+ TG D + ++G+ +VG
Sbjct: 428 AEGWMHTG-------------------------------------DLATMDDEGFVNIVG 450
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGEN+YP+E+EEF HP V + GVPD + GE + I +K + A
Sbjct: 451 RLKDMVIRGGENVYPREVEEFYYRHPKVQDVQVVGVPDAKYGEVLCACIVVKPGLRCTAD 510
Query: 183 EDKSIS 188
E ++ +
Sbjct: 511 ELRAFA 516
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++G+ +VGR+KDM+IRGGEN+YP+E+EEF HP V + GVPD + GE +
Sbjct: 436 DLATMDDEGFVNIVGRLKDMVIRGGENVYPREVEEFYYRHPKVQDVQVVGVPDAKYGEVL 495
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I +K + AD++R F +G+++ +
Sbjct: 496 CACIVVKPGLRCTADELRAFAQGQIAHY 523
>gi|333990040|ref|YP_004522654.1| fatty-acid--CoA ligase [Mycobacterium sp. JDM601]
gi|333486008|gb|AEF35400.1| fatty-acid-CoA ligase FadD35 [Mycobacterium sp. JDM601]
Length = 511
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 82/160 (51%), Gaps = 38/160 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K++D VP G GEL RG+ M GYW D K++ I + W+ +G
Sbjct: 334 LEIKMIDPATGHPVPRGQVGELCTRGYSVMTGYWNDPAKSEAAIDAEGWMHSG------- 386
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ +DGY ++ GRIKDM+IRGGENIYP
Sbjct: 387 ------------------------------DLAVMDDDGYVRITGRIKDMVIRGGENIYP 416
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ THP++L+A GVPDE GEE+ + L++ A
Sbjct: 417 REIEEFLHTHPDILDAQVIGVPDEIYGEELMAVVMLRDGA 456
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +DGY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE GEE+
Sbjct: 387 DLAVMDDDGYVRITGRIKDMVIRGGENIYPREIEEFLHTHPDILDAQVIGVPDEIYGEEL 446
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
+ L++ A L + +R FC G+++ F
Sbjct: 447 MAVVMLRDGAGPLTVERLREFCAGRLAHF 475
>gi|404493602|ref|YP_006717708.1| AMP-binding protein [Pelobacter carbinolicus DSM 2380]
gi|404398004|gb|ABA89204.2| acyl-CoA synthetase, AMP-forming [Pelobacter carbinolicus DSM 2380]
Length = 554
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 386 VPDSAGRSIFEK------DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
+PD R I E D V+ E+GY ++ GRIK+MIIRGGENIYP+EIEEF+ TH
Sbjct: 405 MPDETARVIDEDGWLHTGDLAVMDENGYCKITGRIKNMIIRGGENIYPREIEEFLYTHSK 464
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
V + YGVPD + GE+V +IKLKEN +++I+ FC+G+++ +
Sbjct: 465 VADVQVYGVPDVKYGEQVMAAIKLKENTSATSEEIQDFCRGRIANY 510
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 91/182 (50%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ +T+ + + K+ D + +P G GEL RG+ M GY++ +T I
Sbjct: 354 DPVELRVATVGRALPDVEVKIADIETGQRLPPGRQGELCTRGYLVMKGYYKMPDETARVI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D V+ E+GY ++
Sbjct: 414 DEDGWLHTG-------------------------------------DLAVMDENGYCKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIK+MIIRGGENIYP+EIEEF+ TH V + YGVPD + GE+V +IKLKEN +
Sbjct: 437 GRIKNMIIRGGENIYPREIEEFLYTHSKVADVQVYGVPDVKYGEQVMAAIKLKENTSATS 496
Query: 182 YE 183
E
Sbjct: 497 EE 498
>gi|296134001|ref|YP_003641248.1| AMP-dependent synthetase and ligase [Thermincola potens JR]
gi|296032579|gb|ADG83347.1| AMP-dependent synthetase and ligase [Thermincola potens JR]
Length = 562
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 91/182 (50%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ +T+ S + K+V+ VP G GEL RG+ M GY++ + T I
Sbjct: 362 DPIELRVTTVGRSIPGVEVKIVNPETGEEVPRGVQGELCARGYNVMKGYYKMPEATHAAI 421
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D V+ E+GY ++
Sbjct: 422 DEDGWLHTG-------------------------------------DLAVMDENGYCKIT 444
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ THP +L+ GVPD + GEEV I+L+E ++
Sbjct: 445 GRVKDMIIRGGENIYPREIEEFLYTHPKILDVQVVGVPDVKYGEEVMAWIRLREGVEMTE 504
Query: 182 YE 183
E
Sbjct: 505 EE 506
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 67/88 (76%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY ++ GR+KDMIIRGGENIYP+EIEEF+ THP +L+ GVPD + GEEV
Sbjct: 431 DLAVMDENGYCKITGRVKDMIIRGGENIYPREIEEFLYTHPKILDVQVVGVPDVKYGEEV 490
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+L+E ++ +++R FCKG+++++
Sbjct: 491 MAWIRLREGVEMTEEEVREFCKGRIAQY 518
>gi|323487936|ref|ZP_08093192.1| AMP-binding domain protein [Planococcus donghaensis MPA1U2]
gi|323398360|gb|EGA91150.1| AMP-binding domain protein [Planococcus donghaensis MPA1U2]
Length = 547
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 82/133 (61%), Gaps = 5/133 (3%)
Query: 353 TTRKVALTWPNSMDSEARIYHYKK--YLREEENITVPDSAGRSIFEKDQFVLREDGYGQV 410
T +V L P + + R YH Y E+ DS G + D V E+GY +
Sbjct: 378 TGDEVELGLPGELCT--RGYHVMSGYYKNEDATKMAIDSEGW-LHTGDIAVEDEEGYIDI 434
Query: 411 VGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 470
GRIKDM+IRGGENIYP+EIEEF+ HP+VL+ GVPD + GEE+ I LKE +LN
Sbjct: 435 TGRIKDMVIRGGENIYPREIEEFLYQHPSVLDVQVIGVPDPKYGEELMAWIILKEGEQLN 494
Query: 471 ADDIRTFCKGKVS 483
A+++RT+CKGK+S
Sbjct: 495 AEELRTYCKGKIS 507
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 86/171 (50%), Gaps = 38/171 (22%)
Query: 17 SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKT 75
+ + K++D V G PGEL RG+ M GY+++E TK I + WL TG
Sbjct: 367 AGVEVKIIDPATGDEVELGLPGELCTRGYHVMSGYYKNEDATKMAIDSEGWLHTG----- 421
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
D V E+GY + GRIKDM+IRGGENI
Sbjct: 422 --------------------------------DIAVEDEEGYIDITGRIKDMVIRGGENI 449
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
YP+EIEEF+ HP+VL+ GVPD + GEE+ I LKE +LNA E ++
Sbjct: 450 YPREIEEFLYQHPSVLDVQVIGVPDPKYGEELMAWIILKEGEQLNAEELRT 500
>gi|192288893|ref|YP_001989498.1| AMP-binding domain-containing protein [Rhodopseudomonas palustris
TIE-1]
gi|192282642|gb|ACE99022.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
TIE-1]
Length = 564
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 37/162 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ KVVD + +IVP G GEL RG+ MLGYW++ +KT + + W+ TG
Sbjct: 385 EVKVVDLDGKIVPRGQRGELCTRGYSVMLGYWDEAEKTADVLDAAGWMHTG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + ++G+ +VGRIKDM+IRGGEN+YP+E
Sbjct: 436 ----------------------------DLATIDDEGFCNIVGRIKDMVIRGGENLYPRE 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
IEEF+ HP + + +GV D+R GEE+ ++ + L A
Sbjct: 468 IEEFLYRHPKIQDVQIFGVADDRYGEELCAWVRPRPGETLTA 509
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 69/103 (66%), Gaps = 1/103 (0%)
Query: 381 EENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
E+ V D+AG + D + ++G+ +VGRIKDM+IRGGEN+YP+EIEEF+ HP +
Sbjct: 420 EKTADVLDAAGW-MHTGDLATIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKI 478
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
+ +GV D+R GEE+ ++ + L ADD+R FC+G+++
Sbjct: 479 QDVQIFGVADDRYGEELCAWVRPRPGETLTADDVRAFCQGQIA 521
>gi|374628530|ref|ZP_09700915.1| AMP-dependent synthetase and ligase [Methanoplanus limicola DSM
2279]
gi|373906643|gb|EHQ34747.1| AMP-dependent synthetase and ligase [Methanoplanus limicola DSM
2279]
Length = 566
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 96/184 (52%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +++ ST+ + + K+VD +IV G PGE+ RG+ M Y+ + T++TI
Sbjct: 366 DPIEMRVSTVGRTFPHVEIKIVDPVTQKIVLRGEPGEICARGYVVMKCYYNNPSATRQTI 425
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D+W TG D ++ +G+ ++V
Sbjct: 426 DADKWNHTG-------------------------------------DLGIMDGEGFVKIV 448
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+K+M+IRGGENIYP+EIEEF+ T+P VL+AY GVPDE+ GEE+ +KL E +
Sbjct: 449 GRLKEMVIRGGENIYPREIEEFLHTNPKVLDAYVIGVPDEKYGEELMAWVKLHEGLTMAG 508
Query: 182 YEDK 185
E K
Sbjct: 509 EELK 512
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 73/104 (70%), Gaps = 7/104 (6%)
Query: 389 SAGRSIFEKDQF-------VLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVL 441
SA R + D++ ++ +G+ ++VGR+K+M+IRGGENIYP+EIEEF+ T+P VL
Sbjct: 419 SATRQTIDADKWNHTGDLGIMDGEGFVKIVGRLKEMVIRGGENIYPREIEEFLHTNPKVL 478
Query: 442 EAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+AY GVPDE+ GEE+ +KL E + ++++ FC G+++++
Sbjct: 479 DAYVIGVPDEKYGEELMAWVKLHEGLTMAGEELKEFCDGQIARY 522
>gi|147919060|ref|YP_687210.1| putative long chain fatty-acid CoA ligase [Methanocella arvoryzae
MRE50]
gi|110622606|emb|CAJ37884.1| putative long chain fatty-acid CoA ligase [Methanocella arvoryzae
MRE50]
Length = 569
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 83/167 (49%), Gaps = 38/167 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K++D IVP G PGE+ RG+ M GY+++ T I WL TG
Sbjct: 386 EIKIIDPKTGEIVPRGVPGEICARGYMIMEGYYKNPDATALAIDEKGWLHTG-------- 437
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D VL EDGY ++ GRIKDM+IRGGENIYP+
Sbjct: 438 -----------------------------DLGVLDEDGYCKITGRIKDMVIRGGENIYPR 468
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
E+EEF+ THP + +A GVPD + GEE+ +K+K KL E K
Sbjct: 469 EVEEFLYTHPMISDAQVIGVPDLKYGEELMAWVKVKNGCKLTEGEIK 515
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 387 PDSAGRSIFEK------DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
PD+ +I EK D VL EDGY ++ GRIKDM+IRGGENIYP+E+EEF+ THP +
Sbjct: 421 PDATALAIDEKGWLHTGDLGVLDEDGYCKITGRIKDMVIRGGENIYPREVEEFLYTHPMI 480
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+A GVPD + GEE+ +K+K KL +I+ +CKGK++ +
Sbjct: 481 SDAQVIGVPDLKYGEELMAWVKVKNGCKLTEGEIKEYCKGKIAHY 525
>gi|319795986|ref|YP_004157626.1| AMP-dependent synthetase and ligase [Variovorax paradoxus EPS]
gi|315598449|gb|ADU39515.1| AMP-dependent synthetase and ligase [Variovorax paradoxus EPS]
Length = 560
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 85/173 (49%), Gaps = 40/173 (23%)
Query: 5 NPTDLQFSTLSSSS--FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P D + ST+ + + K++D ++P G GEL RG+ M GYWEDE KT+E I
Sbjct: 363 TPLDKRVSTVGTVQPHLEVKIIDPETGAVMPVGKSGELCTRGYSVMHGYWEDEPKTREAI 422
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ W+ TG D + +GY +V
Sbjct: 423 DAEHWMHTG-------------------------------------DLATMDAEGYVNIV 445
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
GRIKD++IRGGENIYP+EIEEF+ HP V + G+PD + GEE+ I +K
Sbjct: 446 GRIKDLVIRGGENIYPREIEEFLYRHPKVQDVQVVGLPDRKYGEELCAWIIVK 498
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGRIKD++IRGGENIYP+EIEEF+ HP V + G+PD + GEE+
Sbjct: 432 DLATMDAEGYVNIVGRIKDLVIRGGENIYPREIEEFLYRHPKVQDVQVVGLPDRKYGEEL 491
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I +K +IR FCKG+++ +
Sbjct: 492 CAWIIVKPGQTATDTEIRDFCKGQIAHY 519
>gi|429335406|ref|ZP_19216036.1| AMP-binding domain protein [Pseudomonas putida CSV86]
gi|428759890|gb|EKX82174.1| AMP-binding domain protein [Pseudomonas putida CSV86]
Length = 557
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 82/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D + +VP G GEL RG+ MLGYW + T E I P
Sbjct: 369 ELRVTTVGRTQPQLESKIIDEHGCVVPRGQIGELCTRGYSVMLGYWGNPAATAEAIDPAG 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + E GY + GR K
Sbjct: 429 WMHTG-------------------------------------DLASMDEQGYVCIAGRNK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+PDER GEE+ IK
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKF 499
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY + GR KDMIIRGGENIYP+E+EEF THP V + G+PDER GEE+
Sbjct: 434 DLASMDEQGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK +++ +CK +++ F
Sbjct: 494 VAWIKFHPGHSATDVELQAWCKNRIAHF 521
>gi|410895361|ref|XP_003961168.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Takifugu rubripes]
Length = 590
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 79/158 (50%), Gaps = 38/158 (24%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+V+ + P G G++++RG+C M GYW DE K +E++ D W RTG
Sbjct: 413 EAKIVNPSTGEVAPLGETGDIMVRGYCVMQGYWGDEDKAEESVSEDGWYRTG-------- 464
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L GY Q+ GR KD+IIRGGENIYP
Sbjct: 465 -----------------------------DSGSLDAYGYLQIKGRAKDLIIRGGENIYPA 495
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
EIE+ + THP V EA GV D RMGEE+ IKL +
Sbjct: 496 EIEKTLHTHPKVQEAQVVGVEDFRMGEEICAFIKLGDG 533
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 54/80 (67%)
Query: 406 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
GY Q+ GR KD+IIRGGENIYP EIE+ + THP V EA GV D RMGEE+ IKL +
Sbjct: 473 GYLQIKGRAKDLIIRGGENIYPAEIEKTLHTHPKVQEAQVVGVEDFRMGEEICAFIKLGD 532
Query: 466 NAKLNADDIRTFCKGKVSKF 485
+IR +C+GK++ +
Sbjct: 533 GQDSAVQEIRDYCRGKIASY 552
>gi|311032883|ref|ZP_07710973.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. m3-13]
Length = 546
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 89/179 (49%), Gaps = 40/179 (22%)
Query: 10 QFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRW 66
+ ST+ S+ + K++D VP G GEL RG+ M GY+ + +TK+ I + W
Sbjct: 359 RVSTVGSALDNVDVKIIDPATGEHVPNGVQGELCTRGYLVMKGYYNMKDQTKDAIDSEGW 418
Query: 67 LRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKD 126
L TG D + +DGY + GR+KD
Sbjct: 419 LHTG-------------------------------------DLATMDDDGYVVITGRLKD 441
Query: 127 MIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
MIIRGGENIYP+EIEEF+ +HP + + GVPDE+ GE+V IK+K LN+ E K
Sbjct: 442 MIIRGGENIYPREIEEFLYSHPKIFDVQIVGVPDEKFGEQVAAFIKVKPGESLNSQEVK 500
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +DGY + GR+KDMIIRGGENIYP+EIEEF+ +HP + + GVPDE+ GE+V
Sbjct: 423 DLATMDDDGYVVITGRLKDMIIRGGENIYPREIEEFLYSHPKIFDVQIVGVPDEKFGEQV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK+K LN+ +++ +C GK+SK+
Sbjct: 483 AAFIKVKPGESLNSQEVKDYCTGKISKY 510
>gi|403718190|ref|ZP_10943189.1| putative fatty-acid--CoA ligase [Kineosphaera limosa NBRC 100340]
gi|403208635|dbj|GAB97872.1| putative fatty-acid--CoA ligase [Kineosphaera limosa NBRC 100340]
Length = 552
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 75/150 (50%), Gaps = 38/150 (25%)
Query: 19 FQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + P G GEL RG+ MLGYWE +KT E I D W+ TG
Sbjct: 367 LEVKIVDPVTEQETPRGVSGELCTRGYSVMLGYWESPEKTAEAIDADGWMHTG------- 419
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + +DGY +VGRIKDM+IRGGENIYP
Sbjct: 420 ------------------------------DLATMDDDGYCAIVGRIKDMVIRGGENIYP 449
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
+EIEEF+ +HP + + GVPD + GEE+
Sbjct: 450 REIEEFLYSHPGISDVQVVGVPDVKYGEEL 479
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +DGY +VGRIKDM+IRGGENIYP+EIEEF+ +HP + + GVPD + GEE+
Sbjct: 420 DLATMDDDGYCAIVGRIKDMVIRGGENIYPREIEEFLYSHPGISDVQVVGVPDVKYGEEL 479
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSKF 485
I K ++ L+ADDIR FC GK++ +
Sbjct: 480 MAWIIAKPGSEGLDADDIREFCSGKLAHY 508
>gi|359451343|ref|ZP_09240747.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. BSi20480]
gi|358042834|dbj|GAA76996.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. BSi20480]
Length = 577
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 89/174 (51%), Gaps = 40/174 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D I G PGE+ +G M YW DE+KTK TI D WL +G
Sbjct: 400 EVKIIDELGNIQKIGLPGEVCSKGVGIMRCYWNDEEKTKATIDSDGWLHSG--------- 450
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ +G+ +VGRIKDMIIRGGEN+YP+E
Sbjct: 451 ----------------------------DLGVMDSEGFVSIVGRIKDMIIRGGENVYPRE 482
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDYHE 193
IEE + T+P + +A +G+ DE+ GEEV I+ KE+ L ++++I + H+
Sbjct: 483 IEEVLYTYPGIQDAAVFGISDEKYGEEVCAWIQPKEDTTL---DEQAIRAFLHD 533
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Query: 380 EEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
EE+ DS G + D V+ +G+ +VGRIKDMIIRGGEN+YP+EIEE + T+P
Sbjct: 434 EEKTKATIDSDGW-LHSGDLGVMDSEGFVSIVGRIKDMIIRGGENVYPREIEEVLYTYPG 492
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ +A +G+ DE+ GEEV I+ KE+ L+ IR F K++ F
Sbjct: 493 IQDAAVFGISDEKYGEEVCAWIQPKEDTTLDEQAIRAFLHDKLAYF 538
>gi|421456140|ref|ZP_15905483.1| PF13193 domain protein [Acinetobacter baumannii IS-123]
gi|400211238|gb|EJO42201.1| PF13193 domain protein [Acinetobacter baumannii IS-123]
Length = 229
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 87/161 (54%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD +IVP GT GEL +RG+ M GYW +E+KT+E I W+ TG
Sbjct: 50 EIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEEKTREVIDAAGWMHTG--------- 100
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + ++G+ ++ GRIKD++IRGGEN++PKE
Sbjct: 101 ----------------------------DIAEMDQEGFIKIKGRIKDVVIRGGENLFPKE 132
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+F+ THP+V + G+PD + GEE+ I L E+ +++
Sbjct: 133 IEDFLYTHPDVSDVQVIGLPDAKYGEELCACIILHEHHQVD 173
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 9/108 (8%)
Query: 380 EEENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
EE+ V D+AG I E DQ +G+ ++ GRIKD++IRGGEN++PKEIE+F+
Sbjct: 84 EEKTREVIDAAGWMHTGDIAEMDQ-----EGFIKIKGRIKDVVIRGGENLFPKEIEDFLY 138
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
THP+V + G+PD + GEE+ I L E+ +++ D IR FCK +S
Sbjct: 139 THPDVSDVQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHIS 186
>gi|119472994|ref|ZP_01614829.1| acyl-CoA synthase [Alteromonadales bacterium TW-7]
gi|119444614|gb|EAW25925.1| acyl-CoA synthase [Alteromonadales bacterium TW-7]
Length = 577
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 89/174 (51%), Gaps = 40/174 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D I G PGE+ +G M YW DE+KTK TI D WL +G
Sbjct: 400 EVKIIDELGNIQKIGLPGEVCSKGVGIMRCYWNDEEKTKATIDSDGWLHSG--------- 450
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ +G+ +VGRIKDMIIRGGEN+YP+E
Sbjct: 451 ----------------------------DLGVMDSEGFVSIVGRIKDMIIRGGENVYPRE 482
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDYHE 193
IEE + T+P + +A +G+ DE+ GEEV I+ KE+ L ++++I + H+
Sbjct: 483 IEEVLYTYPGIQDAAVFGISDEKYGEEVCAWIQPKEDTTL---DEQAIRAFLHD 533
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Query: 380 EEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
EE+ DS G + D V+ +G+ +VGRIKDMIIRGGEN+YP+EIEE + T+P
Sbjct: 434 EEKTKATIDSDGW-LHSGDLGVMDSEGFVSIVGRIKDMIIRGGENVYPREIEEVLYTYPG 492
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ +A +G+ DE+ GEEV I+ KE+ L+ IR F K++ F
Sbjct: 493 IQDAAVFGISDEKYGEEVCAWIQPKEDTTLDEQAIRAFLHDKLAYF 538
>gi|413964113|ref|ZP_11403340.1| AMP-binding domain protein [Burkholderia sp. SJ98]
gi|413929945|gb|EKS69233.1| AMP-binding domain protein [Burkholderia sp. SJ98]
Length = 576
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 82/165 (49%), Gaps = 40/165 (24%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + K+VD IVP G GEL RG+ M GYW D+ KT+E I
Sbjct: 381 DPLDKRTTTVGRIQPHLEVKIVDPLGNIVPVGETGELCTRGYSVMKGYWGDDAKTREAI- 439
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D + +GY +VG
Sbjct: 440 VDGWMHTG-------------------------------------DLATIDAEGYCNIVG 462
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
R+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD++ GEEV
Sbjct: 463 RLKDMLIRGGENVYPREIEEFLFRHPKVQSVQVFGVPDQKYGEEV 507
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGR+KDM+IRGGEN+YP+EIEEF+ HP V +GVPD++ GEEV
Sbjct: 448 DLATIDAEGYCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKVQSVQVFGVPDQKYGEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I ++ + + ++IR FC+G+++ +
Sbjct: 508 CAWIVVRPGEQASEEEIREFCQGQIAHY 535
>gi|325277410|ref|ZP_08143028.1| AMP-binding domain protein [Pseudomonas sp. TJI-51]
gi|324097454|gb|EGB95682.1| AMP-binding domain protein [Pseudomonas sp. TJI-51]
Length = 560
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 87/178 (48%), Gaps = 39/178 (21%)
Query: 8 DLQFSTLSSSSFQA--KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + Q K+VD + IVP G GEL RG+ MLGYW++ + T I P
Sbjct: 369 ELRVTTVGRTQPQLENKLVDADGCIVPRGEIGELCTRGYSVMLGYWDNPEGTAAAIDPAG 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ +G D V+ E GY ++VGR K
Sbjct: 429 WMHSG-------------------------------------DLAVMDEHGYVRIVGRNK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
DMIIRGGENIYP+E+EEF THP V +A G+P R GE++ +KL A E
Sbjct: 452 DMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEQIVAWVKLHPGHTATAEE 509
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V +A G+P R GE++
Sbjct: 434 DLAVMDEHGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEQI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+KL A++++ +CK +++ +
Sbjct: 494 VAWVKLHPGHTATAEELQCWCKARIAHY 521
>gi|336311874|ref|ZP_08566832.1| long-chain-fatty-acid--CoA ligase [Shewanella sp. HN-41]
gi|335864620|gb|EGM69703.1| long-chain-fatty-acid--CoA ligase [Shewanella sp. HN-41]
Length = 575
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 81/161 (50%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD ++P PGE+ RG+C M YW D KT TI + WL +G
Sbjct: 398 EVKIVDEFGEVLPINQPGEVCSRGYCIMQCYWNDPDKTAATIDSEGWLHSG--------- 448
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + E GY Q+VGRIKDMIIRGGENIYP+E
Sbjct: 449 ----------------------------DIGQMDEQGYVQIVGRIKDMIIRGGENIYPRE 480
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + TH +V +A +GV ++ GEEV IK++ A ++
Sbjct: 481 IEEKLYTHKDVQDAAVFGVQSDKYGEEVCAWIKVRSGATIS 521
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 58/84 (69%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ E GY Q+VGRIKDMIIRGGENIYP+EIEE + TH +V +A +GV ++ GEEV I
Sbjct: 453 MDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVQSDKYGEEVCAWI 512
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
K++ A ++ DIR F K + F
Sbjct: 513 KVRSGATISEADIRHFLTEKFAYF 536
>gi|448746178|ref|ZP_21727846.1| AMP-dependent synthetase/ligase [Halomonas titanicae BH1]
gi|445566040|gb|ELY22147.1| AMP-dependent synthetase/ligase [Halomonas titanicae BH1]
Length = 567
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 80/160 (50%), Gaps = 38/160 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD N I+P G GEL RG+ ML YW +++ T E I W+ TG
Sbjct: 387 LENKIVDPGNGGILPRGEIGELCTRGYSVMLKYWNNDKATAEAIDEAGWMHTG------- 439
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + E+GY Q+VGRIKDM+IRGGEN+YP
Sbjct: 440 ------------------------------DLATMDEEGYIQIVGRIKDMVIRGGENVYP 469
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
KEIEEF+ HP + E GVPD++ GEE+ +KL A
Sbjct: 470 KEIEEFLYAHPAISEVQVTGVPDKKYGEELIAWVKLNSTA 509
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY Q+VGRIKDM+IRGGEN+YPKEIEEF+ HP + E GVPD++ GEE+
Sbjct: 440 DLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYAHPAISEVQVTGVPDKKYGEEL 499
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
+KL A + +++R +CKGK++ F
Sbjct: 500 IAWVKLNSTAGDVTGEELREYCKGKITHF 528
>gi|253701173|ref|YP_003022362.1| AMP-binding protein [Geobacter sp. M21]
gi|251776023|gb|ACT18604.1| AMP-dependent synthetase and ligase [Geobacter sp. M21]
Length = 549
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 95/184 (51%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ ST+ + K+VD + +P G GEL RG+ M GY++ ++T + I
Sbjct: 354 DPIELKVSTVGRVLPDVELKIVDIESGAELPPGKQGELCTRGYLVMKGYYKMPEETAKAI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D V+ E GY ++
Sbjct: 414 DADGWLHTG-------------------------------------DLAVMDEHGYCKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIK+MIIRGGENIYP+EIEEF+ THP + + YGVPD + GE+V ++ LK+ ++++
Sbjct: 437 GRIKNMIIRGGENIYPREIEEFLYTHPKISDVQVYGVPDRKYGEQVMAAVVLKQGSEMSE 496
Query: 182 YEDK 185
E K
Sbjct: 497 TEVK 500
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 66/88 (75%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++ GRIK+MIIRGGENIYP+EIEEF+ THP + + YGVPD + GE+V
Sbjct: 423 DLAVMDEHGYCKITGRIKNMIIRGGENIYPREIEEFLYTHPKISDVQVYGVPDRKYGEQV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++ LK+ ++++ +++ FC+G+++ +
Sbjct: 483 MAAVVLKQGSEMSETEVKEFCRGRIANY 510
>gi|367470281|ref|ZP_09469993.1| Acetoacetyl-CoA synthetase [Patulibacter sp. I11]
gi|365814636|gb|EHN09822.1| Acetoacetyl-CoA synthetase [Patulibacter sp. I11]
Length = 543
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 74/150 (49%), Gaps = 38/150 (25%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD VP G GEL RG+ M GYW D KT E I D W+ TG
Sbjct: 362 VEVKVVDPATGETVPRGETGELCTRGYSVMRGYWNDPGKTAEAIDGDGWMHTG------- 414
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + E GY ++VGR KDMIIRGGEN+YP
Sbjct: 415 ------------------------------DLATIDEQGYLRIVGRSKDMIIRGGENVYP 444
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
+EIEEF+ THP+V + GVPDER GEE+
Sbjct: 445 REIEEFLYTHPDVADVQVIGVPDERFGEEI 474
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY ++VGR KDMIIRGGEN+YP+EIEEF+ THP+V + GVPDER GEE+
Sbjct: 415 DLATIDEQGYLRIVGRSKDMIIRGGENVYPREIEEFLYTHPDVADVQVIGVPDERFGEEI 474
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ + L+ + IR FC+G ++ +
Sbjct: 475 MAWVIPRAGVALDGERIREFCRGTIAHY 502
>gi|344344713|ref|ZP_08775573.1| Long-chain-fatty-acid--CoA ligase [Marichromatium purpuratum 984]
gi|343803647|gb|EGV21553.1| Long-chain-fatty-acid--CoA ligase [Marichromatium purpuratum 984]
Length = 562
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 87/177 (49%), Gaps = 39/177 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + T+ +AKV+D RI P G PGEL +RG+ M GYW+D + T I
Sbjct: 368 DPVERRLQTVGRIGPHLEAKVIDDAGRIRPVGEPGELCVRGYSLMRGYWDDPELTARVID 427
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
WL TG D VL +GY ++VG
Sbjct: 428 EAGWLHTG-------------------------------------DLAVLDAEGYCRIVG 450
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKL 179
+KD IIRGGENI+P+E+E F++THP V A GVPD R+GE V ++L+ A L
Sbjct: 451 GVKDTIIRGGENIHPEEVERFLETHPAVRAAVVVGVPDARLGEVVCACVELQPGASL 507
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D VL +GY ++VG +KD IIRGGENI+P+E+E F++THP V A GVPD R+GE V
Sbjct: 436 DLAVLDAEGYCRIVGGVKDTIIRGGENIHPEEVERFLETHPAVRAAVVVGVPDARLGEVV 495
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++L+ A L + +R +CK +++ F
Sbjct: 496 CACVELQPGASLAPEALREYCKDQIAYF 523
>gi|404259900|ref|ZP_10963203.1| putative fatty-acid--CoA ligase [Gordonia namibiensis NBRC 108229]
gi|403401568|dbj|GAC01613.1| putative fatty-acid--CoA ligase [Gordonia namibiensis NBRC 108229]
Length = 551
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 93/189 (49%), Gaps = 40/189 (21%)
Query: 5 NPTDLQFSTLSSSS--FQAKVVDHN-NRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P DL+ +T+ + K+V + GEL RG+ M GYW D +KT E I
Sbjct: 357 DPLDLRVTTVGQVGPHLEIKIVAPGMGETLGRNETGELCTRGYSVMTGYWNDPEKTAEAI 416
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ W+ TG D + + GY ++
Sbjct: 417 DSEGWMHTG-------------------------------------DLAEMDDAGYVRIT 439
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+ I+L+++A
Sbjct: 440 GRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWIRLRDHATDLT 499
Query: 182 YEDKSISSD 190
ED +D
Sbjct: 500 AEDVRAFAD 508
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Query: 406 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
GY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+ I+L++
Sbjct: 434 GYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWIRLRD 493
Query: 466 NAK-LNADDIRTFCKGKVSK 484
+A L A+D+R F GK+++
Sbjct: 494 HATDLTAEDVRAFADGKIAR 513
>gi|352100941|ref|ZP_08958452.1| AMP-binding domain protein [Halomonas sp. HAL1]
gi|350600862|gb|EHA16919.1| AMP-binding domain protein [Halomonas sp. HAL1]
Length = 573
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 80/160 (50%), Gaps = 38/160 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD N I+P G GEL RG+ ML YW +++ T E I W+ TG
Sbjct: 387 LENKIVDPGNGGILPRGEIGELCTRGYSVMLKYWNNDKATAEAIDEAGWMHTG------- 439
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + E+GY Q+VGRIKDM+IRGGEN+YP
Sbjct: 440 ------------------------------DLATMDEEGYIQIVGRIKDMVIRGGENVYP 469
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
KEIEEF+ HP + E GVPD++ GEE+ +KL A
Sbjct: 470 KEIEEFLYAHPAISEVQVTGVPDKKYGEELIAWVKLNSTA 509
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY Q+VGRIKDM+IRGGEN+YPKEIEEF+ HP + E GVPD++ GEE+
Sbjct: 440 DLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYAHPAISEVQVTGVPDKKYGEEL 499
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
+KL A ++ +++R +CKGK++ F
Sbjct: 500 IAWVKLNSTASEVTGEELREYCKGKITHF 528
>gi|373949980|ref|ZP_09609941.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS183]
gi|386324187|ref|YP_006020304.1| long-chain-fatty-acid--CoA ligase [Shewanella baltica BA175]
gi|333818332|gb|AEG10998.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica BA175]
gi|373886580|gb|EHQ15472.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS183]
Length = 570
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 80/161 (49%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD ++P PGE+ RG+C M YW D +KT TI WL +G
Sbjct: 393 EVKIVDEFGEVLPINQPGEVCSRGYCIMQCYWNDPEKTAATIDSAGWLHSG--------- 443
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + E GY Q+VGRIKDMIIRGGENIYP+E
Sbjct: 444 ----------------------------DIGQMDEQGYVQIVGRIKDMIIRGGENIYPRE 475
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + TH +V +A +GV ++ GEEV IK++ A +
Sbjct: 476 IEEKLYTHKDVQDAAVFGVQSDKYGEEVCAWIKVRSGATIT 516
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 381 EENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
E+ DSAG + D + E GY Q+VGRIKDMIIRGGENIYP+EIEE + TH +V
Sbjct: 428 EKTAATIDSAGW-LHSGDIGQMDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDV 486
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+A +GV ++ GEEV IK++ A + +DIR F K + F
Sbjct: 487 QDAAVFGVQSDKYGEEVCAWIKVRSGATITEEDIRHFLTEKFAYF 531
>gi|91789999|ref|YP_550951.1| AMP-binding domain-containing protein [Polaromonas sp. JS666]
gi|91699224|gb|ABE46053.1| AMP-dependent synthetase and ligase [Polaromonas sp. JS666]
Length = 577
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 90/201 (44%), Gaps = 50/201 (24%)
Query: 1 MWDMNPTDLQFST------------LSSSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNM 47
M + +P Q ST L + K+VD + IV G GEL RG+ M
Sbjct: 366 MTETSPVSCQSSTDTPLEKRVATVGLVQPHLEVKIVDPESGEIVAPGVSGELCTRGYSVM 425
Query: 48 LGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVS 107
GYWEDE +T E I + W+ TG
Sbjct: 426 HGYWEDEARTAEAIDAEGWMHTG------------------------------------- 448
Query: 108 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
D + +GY +VGRIKDM+IRGGENIYP+EIEEF+ HP V + GVPD + GEE+
Sbjct: 449 DLATMDAEGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPKVQDVQVVGVPDPKYGEEL 508
Query: 168 GISIKLKENAKLNAYEDKSIS 188
I +K +N E ++
Sbjct: 509 CAWIIVKPGQSVNEEEIRAFC 529
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGRIKDM+IRGGENIYP+EIEEF+ HP V + GVPD + GEE+
Sbjct: 449 DLATMDAEGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPKVQDVQVVGVPDPKYGEEL 508
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I +K +N ++IR FCKG+++ +
Sbjct: 509 CAWIIVKPGQSVNEEEIRAFCKGQIAHY 536
>gi|359436951|ref|ZP_09227027.1| acyl-CoA synthetase [Pseudoalteromonas sp. BSi20311]
gi|358028325|dbj|GAA63276.1| acyl-CoA synthetase [Pseudoalteromonas sp. BSi20311]
Length = 577
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 81/161 (50%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D I G PGE+ RG M YW DE+KTK TI D WL +G
Sbjct: 400 EVKIIDEVGDIQKIGQPGEVCSRGAGIMRCYWNDEEKTKATIDNDGWLHSG--------- 450
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ +G+ +VGRIKDMIIRGGENIYP+E
Sbjct: 451 ----------------------------DLGVMDSEGFVSIVGRIKDMIIRGGENIYPRE 482
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + T+P + +A +G+ DE+ GEEV I+ KE L+
Sbjct: 483 IEEVLYTYPGIQDAAIFGISDEKFGEEVCAWIQPKEGEVLD 523
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +G+ +VGRIKDMIIRGGENIYP+EIEE + T+P + +A +G+ DE+ GEEV
Sbjct: 451 DLGVMDSEGFVSIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGISDEKFGEEV 510
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+ KE L+ IR F K K++ F
Sbjct: 511 CAWIQPKEGEVLDEQAIRLFLKDKLAYF 538
>gi|261419843|ref|YP_003253525.1| AMP-binding protein [Geobacillus sp. Y412MC61]
gi|297530199|ref|YP_003671474.1| AMP-dependent synthetase and ligase [Geobacillus sp. C56-T3]
gi|319766657|ref|YP_004132158.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC52]
gi|261376300|gb|ACX79043.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC61]
gi|297253451|gb|ADI26897.1| AMP-dependent synthetase and ligase [Geobacillus sp. C56-T3]
gi|317111523|gb|ADU94015.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC52]
Length = 544
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 89/182 (48%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + + K+V+ N+ VP G GEL RG+ M GY+ + + T E I
Sbjct: 351 DPLELRVETVGRALPGVEVKIVEPGTNKEVPRGVQGELCTRGYHVMKGYYNNPEATNEAI 410
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D + E+GY ++
Sbjct: 411 DADGWLHTG-------------------------------------DLATMDENGYCRIT 433
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ HP +L+ GVPDE GEEV I LK+ A
Sbjct: 434 GRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVGVPDEVYGEEVMAWIILKDGETATA 493
Query: 182 YE 183
E
Sbjct: 494 EE 495
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 61/87 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY ++ GR+KDMIIRGGENIYP+EIEEF+ HP +L+ GVPDE GEEV
Sbjct: 420 DLATMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVGVPDEVYGEEV 479
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
I LK+ A++IR FC+G +S+
Sbjct: 480 MAWIILKDGETATAEEIREFCRGNISR 506
>gi|406888952|gb|EKD35271.1| hypothetical protein ACD_75C01967G0001, partial [uncultured
bacterium]
Length = 545
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 92/195 (47%), Gaps = 40/195 (20%)
Query: 3 DMNPTDLQFSTLSSS--SFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKE 59
D + +L+ +T+ + + + K+ D N +P G GEL RG+ M GY++ + T
Sbjct: 357 DRDSLELRTTTVGRALPNVEVKISDPVTNEDLPVGVQGELCTRGYHVMKGYYKMPEATAN 416
Query: 60 TIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQ 119
TI D WL TG D ++ E+GY +
Sbjct: 417 TIDKDNWLHTG-------------------------------------DLAIMDENGYCK 439
Query: 120 VVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKL 179
+ GRIKDMIIRGGENIYP+EIEEF+ THP V + GVP E+ GEEV I+LK
Sbjct: 440 ITGRIKDMIIRGGENIYPREIEEFLYTHPKVKDVQVVGVPSEKYGEEVAAFIQLKSGETA 499
Query: 180 NAYEDKSISSDYHEF 194
E + D F
Sbjct: 500 TDTEIAAFCKDQISF 514
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E+GY ++ GRIKDMIIRGGENIYP+EIEEF+ THP V + GVP E+ GEEV
Sbjct: 428 DLAIMDENGYCKITGRIKDMIIRGGENIYPREIEEFLYTHPKVKDVQVVGVPSEKYGEEV 487
Query: 458 GISIKLKENAKLNADDIRTFCKGKVS 483
I+LK +I FCK ++S
Sbjct: 488 AAFIQLKSGETATDTEIAAFCKDQIS 513
>gi|340795049|ref|YP_004760512.1| acyl-CoA synthetase [Corynebacterium variabile DSM 44702]
gi|340534959|gb|AEK37439.1| acyl-CoA synthetase [Corynebacterium variabile DSM 44702]
Length = 570
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 93/185 (50%), Gaps = 42/185 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD + V GT GEL +RG+ M GYW+ +KT E I + W+ +G
Sbjct: 384 LEVKIVDADGSTVSRGTQGELPVRGYSVMQGYWDMPEKTAEAIDAEGWMHSG-------- 435
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + +GY Q+ GRIKDM+IRGGENIYP+
Sbjct: 436 -----------------------------DLATMDTEGYVQITGRIKDMVIRGGENIYPR 466
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDYHEFETMY 198
EIEEF+ HP++ + GVPDE+ GEE+ I L E+A + +++++D + T
Sbjct: 467 EIEEFLYEHPDIADVQVIGVPDEKYGEELMAWIILDEDA---VADGRTLTAD--DIRTFS 521
Query: 199 DSIMA 203
D +A
Sbjct: 522 DGKLA 526
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 64/93 (68%), Gaps = 5/93 (5%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY Q+ GRIKDM+IRGGENIYP+EIEEF+ HP++ + GVPDE+ GEE+
Sbjct: 436 DLATMDTEGYVQITGRIKDMVIRGGENIYPREIEEFLYEHPDIADVQVIGVPDEKYGEEL 495
Query: 458 GISIKLKENA-----KLNADDIRTFCKGKVSKF 485
I L E+A L ADDIRTF GK++KF
Sbjct: 496 MAWIILDEDAVADGRTLTADDIRTFSDGKLAKF 528
>gi|327399671|ref|YP_004340540.1| long-chain-fatty-acid--CoA ligase [Hippea maritima DSM 10411]
gi|327182300|gb|AEA34481.1| Long-chain-fatty-acid--CoA ligase [Hippea maritima DSM 10411]
Length = 564
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 80/158 (50%), Gaps = 38/158 (24%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+V+ I+P G GEL RG+ M Y+ + Q TKE I D WL TG
Sbjct: 380 IEVKIVNPETGEILPVGEQGELCARGYNVMKYYYNNPQATKEAIDEDGWLHTG------- 432
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + EDGY ++ GRIKDMIIRGG+NIYP
Sbjct: 433 ------------------------------DLATMDEDGYFKITGRIKDMIIRGGQNIYP 462
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 175
+EIEEF+ THP V + GVPD++ GEEV ++LKE
Sbjct: 463 REIEEFLYTHPKVADVQVIGVPDKKYGEEVCAWVRLKE 500
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDGY ++ GRIKDMIIRGG+NIYP+EIEEF+ THP V + GVPD++ GEEV
Sbjct: 433 DLATMDEDGYFKITGRIKDMIIRGGQNIYPREIEEFLYTHPKVADVQVIGVPDKKYGEEV 492
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++LKE ++I+ +C+GK++ +
Sbjct: 493 CAWVRLKEGETATEEEIKEYCQGKIAHY 520
>gi|453382972|dbj|GAC82634.1| putative fatty-acid--CoA ligase [Gordonia paraffinivorans NBRC
108238]
Length = 551
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 91/183 (49%), Gaps = 40/183 (21%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + K++D + GEL RG+ M GYW D +KT E I
Sbjct: 357 DPLELRVGTVGRVGPHLEIKIIDPTTGETLGRNETGELCTRGYSVMKGYWNDPEKTAEAI 416
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ TG D + + GY ++
Sbjct: 417 DADGWMHTG-------------------------------------DLAEMDDAGYVRIT 439
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+ ++L+++A
Sbjct: 440 GRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWVRLRDHADDLT 499
Query: 182 YED 184
ED
Sbjct: 500 AED 502
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Query: 406 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
GY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+ ++L++
Sbjct: 434 GYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWVRLRD 493
Query: 466 NA-KLNADDIRTFCKGKVSK 484
+A L A+D+R F +GK+++
Sbjct: 494 HADDLTAEDVRAFAEGKIAR 513
>gi|359397207|ref|ZP_09190257.1| Putative acyl-CoA synthetase yngI [Halomonas boliviensis LC1]
gi|357969001|gb|EHJ91450.1| Putative acyl-CoA synthetase yngI [Halomonas boliviensis LC1]
Length = 579
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 80/160 (50%), Gaps = 38/160 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD N I+P G GEL RG+ ML YW +++ T E I W+ TG
Sbjct: 387 LENKIVDPGNGGILPRGEIGELCTRGYSVMLKYWNNDKATTEAIDEAGWMHTG------- 439
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + E+GY Q+VGRIKDM+IRGGEN+YP
Sbjct: 440 ------------------------------DLATMDEEGYIQIVGRIKDMVIRGGENVYP 469
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
KEIEEF+ HP + E GVPD++ GEE+ +KL A
Sbjct: 470 KEIEEFLYAHPAISEVQVTGVPDKKYGEELIAWVKLNSTA 509
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY Q+VGRIKDM+IRGGEN+YPKEIEEF+ HP + E GVPD++ GEE+
Sbjct: 440 DLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYAHPAISEVQVTGVPDKKYGEEL 499
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
+KL A ++ +++R +CKGK++ F
Sbjct: 500 IAWVKLNSTAGEVTGEELREYCKGKITHF 528
>gi|71064885|ref|YP_263612.1| AMP-binding protein [Psychrobacter arcticus 273-4]
gi|71037870|gb|AAZ18178.1| putative long-chain fatty acid acyl-CoA ligase [Psychrobacter
arcticus 273-4]
Length = 584
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 96/211 (45%), Gaps = 44/211 (20%)
Query: 5 NPTDLQFST--LSSSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P D Q ST L + + KVVD IVP G GELL RG+ M GYW KT+E I
Sbjct: 394 TPLDKQVSTVGLVQPALEVKVVDAETGEIVPLGETGELLTRGYSVMKGYWGSRFKTREAI 453
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ TG D + EDGY ++V
Sbjct: 454 -QDGWMHTG-------------------------------------DLATMDEDGYVKIV 475
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR KDM+IRGGENIYP EIE ++ HP + + G+PD+R GE + I KE L
Sbjct: 476 GRSKDMVIRGGENIYPVEIENYLYRHPKIRDVQIVGIPDKRYGEVLAAWIIPKEAGSLTE 535
Query: 182 YEDKSISSD---YHEFETMYDSIMAHPNRTT 209
E + S+ +++ T Y + +P T
Sbjct: 536 EEVRQFCSEHIAHYKVPTYYRFVTEYPMTIT 566
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDGY ++VGR KDM+IRGGENIYP EIE ++ HP + + G+PD+R GE +
Sbjct: 462 DLATMDEDGYVKIVGRSKDMVIRGGENIYPVEIENYLYRHPKIRDVQIVGIPDKRYGEVL 521
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I KE L +++R FC ++ +
Sbjct: 522 AAWIIPKEAGSLTEEEVRQFCSEHIAHY 549
>gi|456011983|gb|EMF45703.1| Long-chain-fatty-acid--CoA ligase [Planococcus halocryophilus Or1]
Length = 547
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 87/171 (50%), Gaps = 38/171 (22%)
Query: 17 SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKT 75
+ + K++D V G PGEL RG+ M GY+++E TK I + WL TG
Sbjct: 367 AGVEVKIIDPATGETVEIGMPGELCTRGYHVMSGYYKNEDATKVAIDSEGWLHTG----- 421
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
D V E+GY + GRIKDM+IRGGENI
Sbjct: 422 --------------------------------DIAVEDEEGYIDITGRIKDMVIRGGENI 449
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
YP+EIEEF+ HP+VL+ GVPD + GEE+ I LKE+ +L+A E ++
Sbjct: 450 YPREIEEFLYQHPSVLDVQVIGVPDPKYGEELMAWIILKEDEQLSAEELRT 500
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 83/133 (62%), Gaps = 3/133 (2%)
Query: 353 TTRKVALTWPNSMDSEARIYHY-KKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQVV 411
T V + P + + R YH Y + E+ V + + D V E+GY +
Sbjct: 378 TGETVEIGMPGELCT--RGYHVMSGYYKNEDATKVAIDSEGWLHTGDIAVEDEEGYIDIT 435
Query: 412 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 471
GRIKDM+IRGGENIYP+EIEEF+ HP+VL+ GVPD + GEE+ I LKE+ +L+A
Sbjct: 436 GRIKDMVIRGGENIYPREIEEFLYQHPSVLDVQVIGVPDPKYGEELMAWIILKEDEQLSA 495
Query: 472 DDIRTFCKGKVSK 484
+++RT+CKGK+S+
Sbjct: 496 EELRTYCKGKISR 508
>gi|332534272|ref|ZP_08410116.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas haloplanktis
ANT/505]
gi|332036268|gb|EGI72740.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas haloplanktis
ANT/505]
Length = 577
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 82/161 (50%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D I G PGE+ +G M YW DE KTK TI + WL +G
Sbjct: 400 EVKIIDELGNIQKIGQPGEVCSKGAGIMRCYWNDEAKTKATIDGEGWLHSG--------- 450
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ +G+ +VGRIKDMIIRGGENIYP+E
Sbjct: 451 ----------------------------DLGVMDTEGFVTIVGRIKDMIIRGGENIYPRE 482
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + T+P + +A +G+ DE+ GEEV I+ KE+A LN
Sbjct: 483 IEEVLYTYPGIQDAAIFGITDEKYGEEVCAWIQPKEDAVLN 523
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +G+ +VGRIKDMIIRGGENIYP+EIEE + T+P + +A +G+ DE+ GEEV
Sbjct: 451 DLGVMDTEGFVTIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGITDEKYGEEV 510
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+ KE+A LN IR F K K++ F
Sbjct: 511 CAWIQPKEDAVLNEQAIREFLKDKLAYF 538
>gi|239817684|ref|YP_002946594.1| AMP-binding domain-containing protein [Variovorax paradoxus S110]
gi|239804261|gb|ACS21328.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
Length = 560
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 82/166 (49%), Gaps = 40/166 (24%)
Query: 5 NPTDLQFSTLSSSS--FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P D + ST+ + + K++D IVP G+ GE RG+ M GYWEDE KT+E I
Sbjct: 363 TPLDKRVSTVGTVQPHLEIKIIDPETGAIVPRGSSGEFCTRGYSVMHGYWEDEPKTREAI 422
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ W+ TG D + +GY +V
Sbjct: 423 DTEHWMHTG-------------------------------------DLATMDAEGYVNIV 445
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
GRIKD++IRGGENIYP+EIEEF+ HP V + G+PD + GEE+
Sbjct: 446 GRIKDLVIRGGENIYPREIEEFLYRHPKVQDVQVVGLPDRKYGEEL 491
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGRIKD++IRGGENIYP+EIEEF+ HP V + G+PD + GEE+
Sbjct: 432 DLATMDAEGYVNIVGRIKDLVIRGGENIYPREIEEFLYRHPKVQDVQVVGLPDRKYGEEL 491
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I K D+IR FCKG+++ +
Sbjct: 492 CAWIIAKPGQAATEDEIRDFCKGQIAHY 519
>gi|224368113|ref|YP_002602276.1| protein AcsL2 [Desulfobacterium autotrophicum HRM2]
gi|223690829|gb|ACN14112.1| AcsL2 [Desulfobacterium autotrophicum HRM2]
Length = 556
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 97/198 (48%), Gaps = 43/198 (21%)
Query: 3 DMNPTDLQFSTLSSS--SFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKE 59
D + +++ ST+ + + + K+VD +P G GEL RG+ M GY++ E+ TK
Sbjct: 357 DHDSLEIKTSTVGCALPNVEVKIVDPVTGDEMPRGKQGELCSRGYHVMKGYYKMEEATKN 416
Query: 60 TIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQ 119
TI D WL TG D + E+GY +
Sbjct: 417 TIDKDGWLHTG-------------------------------------DLAEMDENGYCK 439
Query: 120 VVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKL 179
+ GRIKDMIIRGGENIYP+EIEEF+ THP V + G+P E+ GEEV I+++ K
Sbjct: 440 ITGRIKDMIIRGGENIYPREIEEFLYTHPKVKDVQVVGIPSEKYGEEVAAFIQVRPGDKS 499
Query: 180 NAYEDKSISSD---YHEF 194
A E K D YH+
Sbjct: 500 TAEEIKEFCKDQISYHKI 517
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 77/123 (62%), Gaps = 15/123 (12%)
Query: 369 ARIYHY-KKYLREEENITVPDSAGRSIFEKDQFV-------LREDGYGQVVGRIKDMIIR 420
+R YH K Y + EE A ++ +KD ++ + E+GY ++ GRIKDMIIR
Sbjct: 398 SRGYHVMKGYYKMEE-------ATKNTIDKDGWLHTGDLAEMDENGYCKITGRIKDMIIR 450
Query: 421 GGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKG 480
GGENIYP+EIEEF+ THP V + G+P E+ GEEV I+++ K A++I+ FCK
Sbjct: 451 GGENIYPREIEEFLYTHPKVKDVQVVGIPSEKYGEEVAAFIQVRPGDKSTAEEIKEFCKD 510
Query: 481 KVS 483
++S
Sbjct: 511 QIS 513
>gi|359777990|ref|ZP_09281264.1| putative fatty-acid--CoA ligase [Arthrobacter globiformis NBRC
12137]
gi|359304844|dbj|GAB15093.1| putative fatty-acid--CoA ligase [Arthrobacter globiformis NBRC
12137]
Length = 557
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 78/160 (48%), Gaps = 37/160 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++K+VD +V G GEL RG+ M GYW KT E I D W+ TG +
Sbjct: 382 LESKIVDLAGEVVERGVIGELCTRGYAVMQGYWNQPDKTAEAIDADGWMHTGDLAR---- 437
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
+ +DGY + GR+KDM+IRGGENIYP+
Sbjct: 438 ---------------------------------MDDDGYVVIEGRMKDMVIRGGENIYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
EIEEF+ THP++ + GVPD R GEE+ I LK A+
Sbjct: 465 EIEEFLYTHPSIQDVQVIGVPDARYGEELMACIILKPGAE 504
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ +DGY + GR+KDM+IRGGENIYP+EIEEF+ THP++ + GVPD R GEE+ I
Sbjct: 438 MDDDGYVVIEGRMKDMVIRGGENIYPREIEEFLYTHPSIQDVQVIGVPDARYGEELMACI 497
Query: 462 KLKENAK-LNADDIRTFCKGKVSKF 485
LK A+ L+A + FC+GK++ +
Sbjct: 498 ILKPGAEPLDAAAVAEFCRGKLAHY 522
>gi|315126511|ref|YP_004068514.1| acyl-CoA synthetase [Pseudoalteromonas sp. SM9913]
gi|315015025|gb|ADT68363.1| acyl-CoA synthetase [Pseudoalteromonas sp. SM9913]
Length = 577
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 81/161 (50%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D I G PGE+ RG M YW DE+KTK TI D WL +G
Sbjct: 400 EVKIIDEVGDIQKIGQPGEVCSRGAGIMRCYWNDEEKTKATIDNDGWLHSG--------- 450
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ +G+ +VGRIKDMIIRGGENIYP+E
Sbjct: 451 ----------------------------DLGVMDSEGFVSIVGRIKDMIIRGGENIYPRE 482
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + T+P + +A +G+ DE+ GEEV I+ KE L+
Sbjct: 483 IEEVLYTYPGIQDAAIFGISDEKFGEEVCAWIQPKEGEVLD 523
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +G+ +VGRIKDMIIRGGENIYP+EIEE + T+P + +A +G+ DE+ GEEV
Sbjct: 451 DLGVMDSEGFVSIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGISDEKFGEEV 510
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+ KE L+ IR F K K++ F
Sbjct: 511 CAWIQPKEGEVLDEQAIRLFLKDKLAYF 538
>gi|404497540|ref|YP_006721646.1| AMP-binding protein [Geobacter metallireducens GS-15]
gi|418065117|ref|ZP_12702492.1| AMP-dependent synthetase and ligase [Geobacter metallireducens
RCH3]
gi|78195143|gb|ABB32910.1| acyl-CoA synthetase, AMP-forming [Geobacter metallireducens GS-15]
gi|373562749|gb|EHP88956.1| AMP-dependent synthetase and ligase [Geobacter metallireducens
RCH3]
Length = 552
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 76/119 (63%), Gaps = 3/119 (2%)
Query: 369 ARIYHYKK--YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIY 426
AR Y K Y EE V D+ G + D V+ E+GY ++ GRIK MIIRGGENIY
Sbjct: 393 ARGYMVMKGYYKMPEETAKVIDADGW-LHTGDLAVMDENGYCKITGRIKQMIIRGGENIY 451
Query: 427 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
PKEIEEF+ THP + + YGVPD + GE+V +I LK ++ D+++ FC+GK++ +
Sbjct: 452 PKEIEEFLYTHPKISDVQIYGVPDRKYGEQVMAAIILKNGVEMTEDEVKEFCRGKIANY 510
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 90/184 (48%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+ +L+ ST+ + + K VD +P G GEL RG+ M GY++ ++T + I
Sbjct: 354 DSVELRVSTVGRALPGAEVKTVDIETGATLPPGKQGELCARGYMVMKGYYKMPEETAKVI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D V+ E+GY ++
Sbjct: 414 DADGWLHTG-------------------------------------DLAVMDENGYCKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIK MIIRGGENIYPKEIEEF+ THP + + YGVPD + GE+V +I LK ++
Sbjct: 437 GRIKQMIIRGGENIYPKEIEEFLYTHPKISDVQIYGVPDRKYGEQVMAAIILKNGVEMTE 496
Query: 182 YEDK 185
E K
Sbjct: 497 DEVK 500
>gi|51244407|ref|YP_064291.1| AMP-binding domain protein [Desulfotalea psychrophila LSv54]
gi|50875444|emb|CAG35284.1| probable long chain fatty acid-CoA ligase [Desulfotalea
psychrophila LSv54]
Length = 572
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 75/148 (50%), Gaps = 38/148 (25%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
Q K+V + VP G GEL RG+ M GYW D ++T E+I D W+RTG
Sbjct: 398 QVKLVSKEGKTVPVGVTGELWTRGYSVMCGYWADPERTAESI-QDGWMRTG--------- 447
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D VL E+GY +VGR+ DMI+R GENIYP+E
Sbjct: 448 ----------------------------DLAVLDEEGYCSIVGRLSDMILRCGENIYPRE 479
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEV 167
IE ++ HP + E +G+PD R+GEE+
Sbjct: 480 IENYLYGHPAIQEVQVFGIPDPRLGEEL 507
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D VL E+GY +VGR+ DMI+R GENIYP+EIE ++ HP + E +G+PD R+GEE+
Sbjct: 448 DLAVLDEEGYCSIVGRLSDMILRCGENIYPREIENYLYGHPAIQEVQVFGIPDPRLGEEL 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I ++ L DIR FC+GK++ +
Sbjct: 508 CAWIIVRPEHSLEKSDIRQFCRGKIASY 535
>gi|350266151|ref|YP_004877458.1| hypothetical protein GYO_2194 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599038|gb|AEP86826.1| YngI [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 549
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 77/152 (50%), Gaps = 37/152 (24%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY++DE+ T++ I PD WL TG
Sbjct: 386 GVQGELCTRGYHVMKGYYKDEEATRKAINPDGWLFTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+E EEF+ HP +L+
Sbjct: 423 --------------DLAVMDEDGYCRITGRLKDMLIRGGENIYPRETEEFLYRHPYILDV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
GVPD + GEE IKLK+ + E K
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKTASPEEIK 500
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Query: 370 RIYHYKK-YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 428
R YH K Y ++EE + +F D V+ EDGY ++ GR+KDM+IRGGENIYP+
Sbjct: 394 RGYHVMKGYYKDEEATRKAINPDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPR 453
Query: 429 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
E EEF+ HP +L+ GVPD + GEE IKLK+ + ++I+ +CKGK+++
Sbjct: 454 ETEEFLYRHPYILDVQVVGVPDAKFGEEAAAWIKLKDGKTASPEEIKDYCKGKIAR 509
>gi|398306926|ref|ZP_10510512.1| AMP-binding domain protein [Bacillus vallismortis DV1-F-3]
Length = 548
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 73/140 (52%), Gaps = 37/140 (26%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY++DE+ T++ I PD WL TG
Sbjct: 386 GVQGELCTRGYHVMKGYYKDEEATRKAINPDGWLFTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP +L+
Sbjct: 423 --------------DLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPAILDV 468
Query: 154 YAYGVPDERMGEEVGISIKL 173
GVPD + GEE IKL
Sbjct: 469 QVVGVPDTKFGEEAAAWIKL 488
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Query: 370 RIYHYKK-YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 428
R YH K Y ++EE + +F D V+ EDGY ++ GR+KDM+IRGGENIYP+
Sbjct: 394 RGYHVMKGYYKDEEATRKAINPDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPR 453
Query: 429 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
EIEEF+ HP +L+ GVPD + GEE IKL + + ++I+ +CKGK+++
Sbjct: 454 EIEEFLYRHPAILDVQVVGVPDTKFGEEAAAWIKLIDGKTASPEEIKDYCKGKIAR 509
>gi|398843945|ref|ZP_10601058.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
gi|398255049|gb|EJN40093.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
Length = 557
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 88/178 (49%), Gaps = 39/178 (21%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K+VD + IV G GEL RG+ MLGYW + Q + + I P
Sbjct: 369 ELRVTTVGRTQPQLESKLVDADGCIVARGEIGELCTRGYSVMLGYWNNPQASSDAIDPAG 428
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ +G D V+ E GY ++VGR K
Sbjct: 429 WMHSG-------------------------------------DLAVMDEQGYVRIVGRNK 451
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
DMIIRGGENIYP+E+EEF THP V +A G+P + GEEV IKL +A E
Sbjct: 452 DMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSKYGEEVVAWIKLHPGHVASAEE 509
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V +A G+P + GEEV
Sbjct: 434 DLAVMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSKYGEEV 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKL +A++++ +CK +++ F
Sbjct: 494 VAWIKLHPGHVASAEELQVWCKARIAHF 521
>gi|271966242|ref|YP_003340438.1| AMP-dependent synthetase and ligase [Streptosporangium roseum DSM
43021]
gi|270509417|gb|ACZ87695.1| AMP-dependent synthetase and ligase [Streptosporangium roseum DSM
43021]
Length = 530
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 71/137 (51%), Gaps = 37/137 (27%)
Query: 31 VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKP 90
VP G PGEL RG+ MLGYW + ++T E I RW+ TG
Sbjct: 365 VPRGEPGELCTRGYSVMLGYWNEPERTAEAIDTARWMHTG-------------------- 404
Query: 91 LQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 150
D + DGY VVGRIKDM+IRGGEN+YP+E+EEF+ HP++
Sbjct: 405 -----------------DLATMDADGYVNVVGRIKDMVIRGGENVYPREVEEFLYRHPDI 447
Query: 151 LEAYAYGVPDERMGEEV 167
+ GVPDE+ GEE+
Sbjct: 448 ADVQVIGVPDEKYGEEL 464
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 353 TTRKVALTWPNSMDSEARIYHYK---KYLREEENITVPDSAGRSIFEKDQFVLREDGYGQ 409
T + LT P E Y Y E E R + D + DGY
Sbjct: 357 THPETGLTVPRGEPGELCTRGYSVMLGYWNEPERTAEAIDTARWMHTGDLATMDADGYVN 416
Query: 410 VVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK- 468
VVGRIKDM+IRGGEN+YP+E+EEF+ HP++ + GVPDE+ GEE+ + +++
Sbjct: 417 VVGRIKDMVIRGGENVYPREVEEFLYRHPDIADVQVIGVPDEKYGEELMAWVVIRQGGTP 476
Query: 469 LNADDIRTFCKGKVSKF 485
L A+ +R FC GK++ +
Sbjct: 477 LTAEAVREFCAGKLAHY 493
>gi|410455900|ref|ZP_11309772.1| AMP-binding domain protein [Bacillus bataviensis LMG 21833]
gi|409928720|gb|EKN65820.1| AMP-binding domain protein [Bacillus bataviensis LMG 21833]
Length = 545
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 93/184 (50%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + + + K+V+ +R V +G GEL RG+ M GY+++ T E I
Sbjct: 354 DPIELRVETVGKALPNVEVKIVEPGTDREVGYGVQGELCTRGYHVMKGYYKNITATNEAI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ WL TG D V+ E+GY ++
Sbjct: 414 DAEGWLHTG-------------------------------------DLAVMDENGYCKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ +HP VL+ G+PDE GEEV I LKE A
Sbjct: 437 GRLKDMIIRGGENIYPREIEEFLYSHPKVLDIQVIGIPDEVYGEEVMAWIILKEGETATA 496
Query: 182 YEDK 185
E K
Sbjct: 497 EELK 500
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 63/87 (72%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY ++ GR+KDMIIRGGENIYP+EIEEF+ +HP VL+ G+PDE GEEV
Sbjct: 423 DLAVMDENGYCKITGRLKDMIIRGGENIYPREIEEFLYSHPKVLDIQVIGIPDEVYGEEV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
I LKE A++++ FC G++SK
Sbjct: 483 MAWIILKEGETATAEELKEFCLGRISK 509
>gi|24373535|ref|NP_717578.1| AMP-dependent synthetase and ligase family protein [Shewanella
oneidensis MR-1]
gi|24347847|gb|AAN55022.1| AMP-dependent synthetase and ligase family protein [Shewanella
oneidensis MR-1]
Length = 578
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 81/160 (50%), Gaps = 37/160 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD ++P PGE+ RG+C M YW D +KT TI + WL +G
Sbjct: 401 EVKIVDEFGEVLPINQPGEVCSRGYCIMQCYWNDPEKTAATIDREGWLHSG--------- 451
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + E GY Q+VGRIKDMIIRGGENIYP+E
Sbjct: 452 ----------------------------DIGQMDEQGYVQIVGRIKDMIIRGGENIYPRE 483
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKL 179
IEE + TH +V +A +GV ++ GEEV IK++ A +
Sbjct: 484 IEEKLYTHKDVQDAAVFGVHSDKYGEEVCAWIKVRSGATI 523
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 58/84 (69%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ E GY Q+VGRIKDMIIRGGENIYP+EIEE + TH +V +A +GV ++ GEEV I
Sbjct: 456 MDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVHSDKYGEEVCAWI 515
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
K++ A + +DIR F K + F
Sbjct: 516 KVRSGATIKEEDIRHFLTEKFAYF 539
>gi|406890696|gb|EKD36525.1| AcsL2 [uncultured bacterium]
Length = 385
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 93/195 (47%), Gaps = 40/195 (20%)
Query: 3 DMNPTDLQFSTLSSS--SFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKE 59
D + +L+ ST+ + + + K+ D R +P G GEL RG+ M GY++ + T +
Sbjct: 191 DRDSLELKTSTVGRALPNVEVKITDPVTGREMPVGQQGELCTRGYHVMKGYYKMPEATAK 250
Query: 60 TIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQ 119
T+ DRWL TG D ++ ++GY +
Sbjct: 251 TVDRDRWLHTG-------------------------------------DLAIMDQNGYCK 273
Query: 120 VVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKL 179
+ GRIKDMIIRGGENIYP+EIEEF+ TH V + G+P E+ GEEV I+LK K
Sbjct: 274 ITGRIKDMIIRGGENIYPREIEEFLYTHAKVKDVQVVGIPSEKYGEEVAAFIQLKNGEKA 333
Query: 180 NAYEDKSISSDYHEF 194
E D F
Sbjct: 334 TDTEITGFCKDQISF 348
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
Query: 370 RIYHY-KKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 428
R YH K Y + E R + D ++ ++GY ++ GRIKDMIIRGGENIYP+
Sbjct: 233 RGYHVMKGYYKMPEATAKTVDRDRWLHTGDLAIMDQNGYCKITGRIKDMIIRGGENIYPR 292
Query: 429 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
EIEEF+ TH V + G+P E+ GEEV I+LK K +I FCK ++S
Sbjct: 293 EIEEFLYTHAKVKDVQVVGIPSEKYGEEVAAFIQLKNGEKATDTEITGFCKDQIS 347
>gi|448237839|ref|YP_007401897.1| acyl-CoA synthetase [Geobacillus sp. GHH01]
gi|445206681|gb|AGE22146.1| acyl-CoA synthetase [Geobacillus sp. GHH01]
Length = 544
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 89/182 (48%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + + K+V+ N+ VP G GEL RG+ M GY+ + + T E I
Sbjct: 351 DPLELRVETVGRALPGVEVKIVEPGTNKEVPRGVQGELCTRGYHVMKGYYNNPEATNEAI 410
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D + E+GY ++
Sbjct: 411 DQDGWLHTG-------------------------------------DLATMDENGYCRIT 433
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ HP +L+ GVPDE GEEV I LK+ A
Sbjct: 434 GRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVGVPDEVYGEEVMAWIILKDGETATA 493
Query: 182 YE 183
E
Sbjct: 494 EE 495
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 61/87 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY ++ GR+KDMIIRGGENIYP+EIEEF+ HP +L+ GVPDE GEEV
Sbjct: 420 DLATMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVGVPDEVYGEEV 479
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
I LK+ A++IR FC+G +S+
Sbjct: 480 MAWIILKDGETATAEEIREFCRGNISR 506
>gi|351713573|gb|EHB16492.1| Acyl-CoA synthetase family member 2, mitochondrial [Heterocephalus
glaber]
Length = 578
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 82/168 (48%), Gaps = 38/168 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V + TPGEL IRG+C M GYW + KT E +G D+W RTG
Sbjct: 404 EAQIVSMETGELAALNTPGELCIRGYCIMQGYWGEPDKTSEVVGQDKWYRTG-------- 455
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E+G+ ++VGR KDMIIRGGENIYP
Sbjct: 456 -----------------------------DIATMDEEGFCRIVGRSKDMIIRGGENIYPA 486
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
E+E+F HP V E GV D+RMGEE+ I+LK E K+
Sbjct: 487 ELEDFFHKHPQVQEVQVVGVKDQRMGEEICACIRLKSGETTTEEEIKA 534
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+G+ ++VGR KDMIIRGGENIYP E+E+F HP V E GV D+RMGEE+
Sbjct: 456 DIATMDEEGFCRIVGRSKDMIIRGGENIYPAELEDFFHKHPQVQEVQVVGVKDQRMGEEI 515
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK ++I+ FCKGK+S F
Sbjct: 516 CACIRLKSGETTTEEEIKAFCKGKISHF 543
>gi|425747028|ref|ZP_18865048.1| AMP-binding enzyme [Acinetobacter baumannii WC-323]
gi|425484455|gb|EKU50859.1| AMP-binding enzyme [Acinetobacter baumannii WC-323]
Length = 564
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 37/162 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD IV G GEL +RG+ M GYW++ +KTKE I W+ TG
Sbjct: 384 LEVKIVDLEGEIVQQGVLGELCVRGYSVMAGYWDEPEKTKEVIDAAGWMHTG-------- 435
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + +DG+ ++ GRIKD++IRGGEN++PK
Sbjct: 436 -----------------------------DIAEMDQDGFIKIKGRIKDVVIRGGENLFPK 466
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIE+F+ THP++ + G+PD R GEE+ I L E+ + +
Sbjct: 467 EIEDFLYTHPDISDVQVIGLPDSRYGEELCACIILHEHHQCD 508
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 68/107 (63%), Gaps = 9/107 (8%)
Query: 381 EENITVPDSAG----RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
E+ V D+AG I E DQ DG+ ++ GRIKD++IRGGEN++PKEIE+F+ T
Sbjct: 420 EKTKEVIDAAGWMHTGDIAEMDQ-----DGFIKIKGRIKDVVIRGGENLFPKEIEDFLYT 474
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVS 483
HP++ + G+PD R GEE+ I L E+ + + D IR FCK +S
Sbjct: 475 HPDISDVQVIGLPDSRYGEELCACIILHEHHQCDEDSIRHFCKEHIS 521
>gi|56962365|ref|YP_174090.1| AMP-binding protein [Bacillus clausii KSM-K16]
gi|56908602|dbj|BAD63129.1| long-chain-fatty-acid--CoA ligase [Bacillus clausii KSM-K16]
Length = 545
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 87/167 (52%), Gaps = 38/167 (22%)
Query: 18 SFQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTS 76
+ + K+VD + + V G GELL RG+ M GY++ ++T + + D WL TG
Sbjct: 368 NVEVKIVDPDTQEEVAAGVQGELLTRGYHVMKGYYKQPEETAKVLTGDGWLHTG------ 421
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
D ++ EDGY ++ GR+KDMIIRGGENIY
Sbjct: 422 -------------------------------DLAIMDEDGYCKITGRLKDMIIRGGENIY 450
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
P+EIEEF+ THP++L+ G+PD + GE V I+LK + L A E
Sbjct: 451 PREIEEFLYTHPSILDVQVVGLPDPKYGEIVSAWIRLKADHSLTAAE 497
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Query: 370 RIYHYKK--YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYP 427
R YH K Y + EE V G + D ++ EDGY ++ GR+KDMIIRGGENIYP
Sbjct: 393 RGYHVMKGYYKQPEETAKVLTGDGW-LHTGDLAIMDEDGYCKITGRLKDMIIRGGENIYP 451
Query: 428 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+EIEEF+ THP++L+ G+PD + GE V I+LK + L A +++ +CKG+++ F
Sbjct: 452 REIEEFLYTHPSILDVQVVGLPDPKYGEIVSAWIRLKADHSLTAAEVQDYCKGQIAHF 509
>gi|403722609|ref|ZP_10945108.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
gi|403206504|dbj|GAB89439.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
Length = 543
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 94/195 (48%), Gaps = 46/195 (23%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + KVVD + G GE RG+ M GYW +KT E I
Sbjct: 351 DPLELRVGTVGRVGPHLEIKVVDPATGETLRRGETGEFCTRGYSVMKGYWNQPEKTAEAI 410
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ TG D V+ ++GY ++
Sbjct: 411 DTDGWMHTG-------------------------------------DLAVMDDNGYVRIT 433
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPD + GEE+ ++L++ +
Sbjct: 434 GRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDAKYGEELMAWVRLRDGVS-DF 492
Query: 182 YEDKSISSDYHEFET 196
ED D EF T
Sbjct: 493 TED-----DLREFAT 502
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ ++GY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPD + GEE+
Sbjct: 420 DLAVMDDNGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDAKYGEEL 479
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSK 484
++L++ + DD+R F GK+++
Sbjct: 480 MAWVRLRDGVSDFTEDDLREFATGKIAR 507
>gi|138895109|ref|YP_001125562.1| AMP-binding protein [Geobacillus thermodenitrificans NG80-2]
gi|196248309|ref|ZP_03147010.1| AMP-dependent synthetase and ligase [Geobacillus sp. G11MC16]
gi|134266622|gb|ABO66817.1| Long-chain fatty-acid-CoA ligase [Geobacillus thermodenitrificans
NG80-2]
gi|196212034|gb|EDY06792.1| AMP-dependent synthetase and ligase [Geobacillus sp. G11MC16]
Length = 544
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 88/182 (48%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + + K+V+ VP G GEL RG+ M GY+ + + T E I
Sbjct: 351 DPIELRVETVGRALPGVEVKIVEPGTCNEVPRGVQGELCTRGYHVMKGYYNNPEATNEAI 410
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D + E+GY ++
Sbjct: 411 DEDGWLHTG-------------------------------------DLATMDENGYCRIT 433
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ HP +L+ GVPDER GEEV I LK+ A
Sbjct: 434 GRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVGVPDERYGEEVMAWIILKDGETATA 493
Query: 182 YE 183
E
Sbjct: 494 EE 495
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 62/87 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY ++ GR+KDMIIRGGENIYP+EIEEF+ HP +L+ GVPDER GEEV
Sbjct: 420 DLATMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVGVPDERYGEEV 479
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
I LK+ A++IR FC+G +S+
Sbjct: 480 MAWIILKDGETATAEEIREFCRGNISR 506
>gi|145477323|ref|XP_001424684.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391750|emb|CAK57286.1| unnamed protein product [Paramecium tetraurelia]
Length = 572
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 82/159 (51%), Gaps = 37/159 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD N +VP+ TPGE RG+ M YWEDE+ T+ETI + +L +G
Sbjct: 388 EVKIVDSNGNVVPYDTPGEYCARGYSVMKKYWEDEKATRETIDKNGFLHSG--------- 438
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + +DGY +VGR KDMIIRGGENIYPKE
Sbjct: 439 ----------------------------DIATMDKDGYIAIVGRNKDMIIRGGENIYPKE 470
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
IEE++ V + G DE+ GEEV IK+K++A+
Sbjct: 471 IEEYLSHMNGVEQVQVIGCNDEKYGEEVVALIKMKKDAE 509
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 65/106 (61%), Gaps = 8/106 (7%)
Query: 388 DSAGRSIFEKDQFV-------LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
+ A R +K+ F+ + +DGY +VGR KDMIIRGGENIYPKEIEE++ V
Sbjct: 422 EKATRETIDKNGFLHSGDIATMDKDGYIAIVGRNKDMIIRGGENIYPKEIEEYLSHMNGV 481
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
+ G DE+ GEEV IK+K++A +++ D+ +C K++ +
Sbjct: 482 EQVQVIGCNDEKYGEEVVALIKMKKDAEEISGLDVYQYCHKKIAYY 527
>gi|23099672|ref|NP_693138.1| AMP-binding protein [Oceanobacillus iheyensis HTE831]
gi|22777902|dbj|BAC14173.1| long-chain fatty-acid-CoA ligase [Oceanobacillus iheyensis HTE831]
Length = 547
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 91/174 (52%), Gaps = 40/174 (22%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ ++ + + + K++D N +P T GEL RG+ M GY+++ + T+ TI
Sbjct: 354 DPIELRVESVGKALPNVEVKIIDPATNEELPHYTQGELCTRGYHVMKGYYKNPEATQRTI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D ++ ++GY ++
Sbjct: 414 DEDGWLHTG-------------------------------------DLAIMDDNGYCKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 175
GR+KDMIIRGGENIYP+EIEE + HP +L+A GVPDE+ GEEV I LKE
Sbjct: 437 GRLKDMIIRGGENIYPREIEELLYKHPKILDAQVVGVPDEKFGEEVHAWIILKE 490
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 72/105 (68%), Gaps = 6/105 (5%)
Query: 387 PDSAGRSIFEK------DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
P++ R+I E D ++ ++GY ++ GR+KDMIIRGGENIYP+EIEE + HP +
Sbjct: 406 PEATQRTIDEDGWLHTGDLAIMDDNGYCKITGRLKDMIIRGGENIYPREIEELLYKHPKI 465
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
L+A GVPDE+ GEEV I LKE ++D+I+ FC G++SK+
Sbjct: 466 LDAQVVGVPDEKFGEEVHAWIILKEGEISSSDEIKQFCNGQISKY 510
>gi|433635586|ref|YP_007269213.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070017]
gi|432167179|emb|CCK64690.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070017]
Length = 547
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 79/160 (49%), Gaps = 38/160 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD VP G GE RG+ M GYW D QKT E I D W+ TG
Sbjct: 369 LEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMHTG------- 421
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + + GY ++ GRIKD+++RGGENI P
Sbjct: 422 ------------------------------DLAEMDQSGYVRIAGRIKDLVVRGGENISP 451
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEE + THP++++ + GVPD + GEE+ +KL+ +A
Sbjct: 452 REIEELLHTHPDIVDGHVIGVPDAKYGEELMAVVKLRNDA 491
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
+ GY ++ GRIKD+++RGGENI P+EIEE + THP++++ + GVPD + GEE+ +KL
Sbjct: 428 QSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGEELMAVVKL 487
Query: 464 KENA-KLNADDIRTFCKGKVSKF 485
+ +A +L + +R +C G++++F
Sbjct: 488 RNDAPELTIERLREYCMGRIARF 510
>gi|378716736|ref|YP_005281625.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans VH2]
gi|375751439|gb|AFA72259.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans VH2]
Length = 561
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 68/88 (77%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +GY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+
Sbjct: 436 DLAVMDPNGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEEL 495
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSK 484
I+L++ A +L ADD+R F GK+++
Sbjct: 496 MAWIRLRDGASELTADDVREFATGKIAR 523
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 96/202 (47%), Gaps = 53/202 (26%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + KV+D + + G GE RG+ M GYW K+ E +
Sbjct: 360 DPLELRVGTVGRVGPHLEVKVIDPVSGETLRRGETGEFCTRGYSVMSGYWNQPDKSAEVL 419
Query: 62 GPDR-------WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLRE 114
P+ W+RTG D V+
Sbjct: 420 IPEPTDPQGSPWMRTG-------------------------------------DLAVMDP 442
Query: 115 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
+GY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+ I+L+
Sbjct: 443 NGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWIRLR 502
Query: 175 ENAKLNAYEDKSISSDYHEFET 196
+ A + + D EF T
Sbjct: 503 DGAS------ELTADDVREFAT 518
>gi|359765441|ref|ZP_09269267.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans NBRC
16320]
gi|359317165|dbj|GAB22100.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans NBRC
16320]
Length = 561
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 68/88 (77%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +GY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+
Sbjct: 436 DLAVMDPNGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEEL 495
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSK 484
I+L++ A +L ADD+R F GK+++
Sbjct: 496 MAWIRLRDGASELTADDVREFATGKIAR 523
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 96/202 (47%), Gaps = 53/202 (26%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + KV+D + + G GE RG+ M GYW K+ E +
Sbjct: 360 DPLELRVGTVGRVGPHLEVKVIDPVSGETLRRGETGEFCTRGYSVMSGYWNQPDKSAEVL 419
Query: 62 GPDR-------WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLRE 114
P+ W+RTG D V+
Sbjct: 420 IPEPTDPQGSPWMRTG-------------------------------------DLAVMDP 442
Query: 115 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
+GY ++ GRIKDM+IRGGENIYP+EIEEF+ THP++L+A GVPDE+ GEE+ I+L+
Sbjct: 443 NGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWIRLR 502
Query: 175 ENAKLNAYEDKSISSDYHEFET 196
+ A + + D EF T
Sbjct: 503 DGAS------ELTADDVREFAT 518
>gi|377574787|ref|ZP_09803802.1| putative fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC 104925]
gi|377536492|dbj|GAB48967.1| putative fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC 104925]
Length = 543
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 70/137 (51%), Gaps = 37/137 (27%)
Query: 31 VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKP 90
VP GT GE RG+ M GYW ++T E I D W+ TG
Sbjct: 378 VPRGTTGEFCTRGYSVMKGYWNAPERTAEAIDADGWMHTG-------------------- 417
Query: 91 LQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 150
D V+ EDGY +VGR+KDM+IRGGENIYP+EIEEF+ THP +
Sbjct: 418 -----------------DLAVMDEDGYCAIVGRMKDMVIRGGENIYPREIEEFLYTHPAI 460
Query: 151 LEAYAYGVPDERMGEEV 167
+ GVPDE+ GEE+
Sbjct: 461 ADVSVVGVPDEKYGEEL 477
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDGY +VGR+KDM+IRGGENIYP+EIEEF+ THP + + GVPDE+ GEE+
Sbjct: 418 DLAVMDEDGYCAIVGRMKDMVIRGGENIYPREIEEFLYTHPAIADVSVVGVPDEKYGEEL 477
Query: 458 -GISIKLKENAKLNADDIRTFCKGKVSKF 485
I + + L A+D+ F G+++ +
Sbjct: 478 MAWIITVPGHEALTAEDLDEFSAGRLAHY 506
>gi|312794897|ref|YP_004027819.1| long-chain-fatty-acid--CoA ligase [Burkholderia rhizoxinica HKI
454]
gi|312166672|emb|CBW73675.1| Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) [Burkholderia
rhizoxinica HKI 454]
Length = 582
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 79/163 (48%), Gaps = 38/163 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK++D IVP G GEL +G+ M GYW D++KT+E+I D W+ TG
Sbjct: 403 LEAKIIDALGNIVPVGQTGELCTKGYSVMQGYWGDDEKTRESI-IDGWMHTG-------- 453
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L GY +VGR+KDM+IRGGENIYP+
Sbjct: 454 -----------------------------DLATLDAQGYCNIVGRLKDMVIRGGENIYPR 484
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
EIEE + HP + +GVPD + GEE+ I L+ A
Sbjct: 485 EIEELLFRHPKIQSVQVFGVPDAKYGEELCAWIVLRPGETATA 527
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L GY +VGR+KDM+IRGGENIYP+EIEE + HP + +GVPD + GEE+
Sbjct: 454 DLATLDAQGYCNIVGRLKDMVIRGGENIYPREIEELLFRHPKIQSVQVFGVPDAKYGEEL 513
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ A+DIR FC G+++ +
Sbjct: 514 CAWIVLRPGETATAEDIRDFCHGQIAHY 541
>gi|340789441|ref|YP_004754906.1| long-chain-fatty-acid--CoA ligase [Collimonas fungivorans Ter331]
gi|340554708|gb|AEK64083.1| Long-chain-fatty-acid--CoA ligase [Collimonas fungivorans Ter331]
Length = 564
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 86/173 (49%), Gaps = 40/173 (23%)
Query: 5 NPTDLQFSTLSSSS--FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P + + ST+ Q K+VD + I+P G+ GEL G+ M GYW DE+KT+E I
Sbjct: 367 TPLEKRVSTVGQVQPHLQVKIVDPESGAIMPIGSSGELCTHGYSVMHGYWGDEEKTREAI 426
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ W+ TG D + +GY +V
Sbjct: 427 DGEGWMHTG-------------------------------------DLATMDSEGYVNIV 449
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
GR+KDM+IRGGENIYP+EIEEF+ HP + + GVPD++ GEE+ I L+
Sbjct: 450 GRMKDMVIRGGENIYPREIEEFLYRHPAIQDVQVVGVPDQKYGEELCAWIILR 502
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGR+KDM+IRGGENIYP+EIEEF+ HP + + GVPD++ GEE+
Sbjct: 436 DLATMDSEGYVNIVGRMKDMVIRGGENIYPREIEEFLYRHPAIQDVQVVGVPDQKYGEEL 495
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ + +R FC+G+++ +
Sbjct: 496 CAWIILRPGQTADEQSVRDFCQGQIAHY 523
>gi|403385096|ref|ZP_10927153.1| acyl-CoA synthase [Kurthia sp. JC30]
Length = 542
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 84/170 (49%), Gaps = 41/170 (24%)
Query: 23 VVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAM 82
V N +P G GE++ RG+C M GY++++ T E I D WL TG
Sbjct: 375 VAPGTNEELPRGVQGEIVARGYCVMKGYYKNQDATAEAIDQDGWLHTG------------ 422
Query: 83 AIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEE 142
D + EDGY +V GR+KDMIIRGGENIYP+EIEE
Sbjct: 423 -------------------------DLGTMDEDGYLKVTGRLKDMIIRGGENIYPREIEE 457
Query: 143 FIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN----AKLNAYEDKSIS 188
F+ +HP +L+ GVPD + GEE+ I K++ A + AY IS
Sbjct: 458 FLYSHPQILDVQVVGVPDPKYGEELAAWIIPKDSSLDEADIRAYCTGKIS 507
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDGY +V GR+KDMIIRGGENIYP+EIEEF+ +HP +L+ GVPD + GEE+
Sbjct: 423 DLGTMDEDGYLKVTGRLKDMIIRGGENIYPREIEEFLYSHPQILDVQVVGVPDPKYGEEL 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
I + +++ L+ DIR +C GK+S+
Sbjct: 483 AAWI-IPKDSSLDEADIRAYCTGKISR 508
>gi|333371631|ref|ZP_08463576.1| AMP-binding enzyme family protein [Desmospora sp. 8437]
gi|332975849|gb|EGK12727.1| AMP-binding enzyme family protein [Desmospora sp. 8437]
Length = 568
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 79/124 (63%), Gaps = 13/124 (10%)
Query: 369 ARIYHYKK-YLREEENITVPDSAGRSIFEK------DQFVLREDGYGQVVGRIKDMIIRG 421
R YH K Y R +P++ ++I E+ D L E+GY ++ GR+KDMIIRG
Sbjct: 412 TRGYHVMKGYYR------MPEATRQAIDEEGWLHTGDLATLDEEGYLRITGRLKDMIIRG 465
Query: 422 GENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGK 481
GENIYP+EIEEF+ THP +L+ GVPDE+ GEEV I+ KE L D+IR +C GK
Sbjct: 466 GENIYPREIEEFLYTHPKILDVQIVGVPDEKYGEEVMAFIRPKEGESLTIDEIREYCIGK 525
Query: 482 VSKF 485
++++
Sbjct: 526 IARY 529
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 87/182 (47%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + + ST+ + K++D V G GEL RG+ M GY+ + T++ I
Sbjct: 373 DPIERRVSTVGKKLPHVEVKIIDPATGEEVETGEQGELCTRGYHVMKGYYRMPEATRQAI 432
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ WL TG D L E+GY ++
Sbjct: 433 DEEGWLHTG-------------------------------------DLATLDEEGYLRIT 455
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ THP +L+ GVPDE+ GEEV I+ KE L
Sbjct: 456 GRLKDMIIRGGENIYPREIEEFLYTHPKILDVQIVGVPDEKYGEEVMAFIRPKEGESLTI 515
Query: 182 YE 183
E
Sbjct: 516 DE 517
>gi|393718188|ref|ZP_10338115.1| AMP-binding domain protein [Sphingomonas echinoides ATCC 14820]
Length = 565
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 78/162 (48%), Gaps = 37/162 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK++D RIVP G GE+ RG+ MLGYW D+ T T W+ TG
Sbjct: 381 IEAKLIDEEGRIVPRGAIGEICTRGYSTMLGYWNDQDATAATKDVAGWVHTG-------- 432
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D L G ++VGRIKDM+IRGGEN+YPK
Sbjct: 433 -----------------------------DLGTLDPRGDLRIVGRIKDMVIRGGENLYPK 463
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
EIEEF+ HP + + +G+PD + GEE+ I E A L+
Sbjct: 464 EIEEFLHAHPAIRDVQVFGIPDPKFGEELCAWIIPNEPAGLD 505
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
+ D L G ++VGRIKDM+IRGGEN+YPKEIEEF+ HP + + +G+PD +
Sbjct: 429 VHTGDLGTLDPRGDLRIVGRIKDMVIRGGENLYPKEIEEFLHAHPAIRDVQVFGIPDPKF 488
Query: 454 GEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
GEE+ I E A L+ D++R C +S+
Sbjct: 489 GEELCAWIIPNEPAGLDEDELRRHCMAAISR 519
>gi|260904720|ref|ZP_05913042.1| AMP-binding domain protein [Brevibacterium linens BL2]
Length = 564
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 82/159 (51%), Gaps = 38/159 (23%)
Query: 19 FQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+ D + VP G GEL RG+ MLGYWE+++KT ETI RW+ TG
Sbjct: 384 LEIKIADPVTGQAVPRGQKGELCTRGYAVMLGYWENQEKTAETIDASRWIHTG------- 436
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D ++ ++GY + GRIKDM+IRGGEN+YP
Sbjct: 437 ------------------------------DLGIMDDNGYVDISGRIKDMVIRGGENVYP 466
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
+E+EEF+ HP++ + GV DE+ GEE+ + LK+
Sbjct: 467 REVEEFLYHHPSIRDVQVVGVADEKYGEELMAWVILKDG 505
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R I D ++ ++GY + GRIKDM+IRGGEN+YP+E+EEF+ HP++ + GV
Sbjct: 429 ASRWIHTGDLGIMDDNGYVDISGRIKDMVIRGGENVYPREVEEFLYHHPSIRDVQVVGVA 488
Query: 450 DERMGEEVGISIKLKEN-AKLNADDIRTFCKGKVSKF 485
DE+ GEE+ + LK+ L A ++R FC GK++ F
Sbjct: 489 DEKYGEELMAWVILKDGFDSLTAAEVREFCNGKLAHF 525
>gi|313240223|emb|CBY32571.1| unnamed protein product [Oikopleura dioica]
Length = 577
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 84/169 (49%), Gaps = 39/169 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
QAK++D + VP GT GEL +G+ GY DE+KTKE+ D + +TG
Sbjct: 397 QAKILDKDGNTVPKGTIGELCTKGYFVFNGYINDEEKTKESFTEDGFFKTG--------- 447
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D +LREDG ++ GR KD+IIRGGENI P E
Sbjct: 448 ----------------------------DLAMLREDGMIKITGREKDLIIRGGENIQPTE 479
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
IE+FI P V Y +GVP +R+ EEV I L ENA + ED I+
Sbjct: 480 IEDFINEMPEVKATYVFGVPSKRLDEEVAAYIDLNENASIT--EDDVIA 526
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D +LREDG ++ GR KD+IIRGGENI P EIE+FI P V Y +GVP +R+ EEV
Sbjct: 448 DLAMLREDGMIKITGREKDLIIRGGENIQPTEIEDFINEMPEVKATYVFGVPSKRLDEEV 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L ENA + DD+ CK +++F
Sbjct: 508 AAYIDLNENASITEDDVIAHCKNGLARF 535
>gi|313237125|emb|CBY12346.1| unnamed protein product [Oikopleura dioica]
Length = 255
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 84/169 (49%), Gaps = 39/169 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
QAK++D + VP GT GEL +G+ GY DE+KTKE+ D + +TG
Sbjct: 75 QAKILDKDGNTVPKGTIGELCTKGYFVFNGYINDEEKTKESFTEDGFFKTG--------- 125
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D +LREDG ++ GR KD+IIRGGENI P E
Sbjct: 126 ----------------------------DLAMLREDGMIKITGREKDLIIRGGENIQPTE 157
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
IE+FI P V Y +GVP +R+ EEV I L ENA + ED I+
Sbjct: 158 IEDFINEMPEVKATYVFGVPSKRLDEEVAAYIDLNENASIT--EDDVIA 204
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D +LREDG ++ GR KD+IIRGGENI P EIE+FI P V Y +GVP +R+ EEV
Sbjct: 126 DLAMLREDGMIKITGREKDLIIRGGENIQPTEIEDFINEMPEVKATYVFGVPSKRLDEEV 185
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L ENA + DD+ CK +++F
Sbjct: 186 AAYIDLNENASITEDDVIAHCKNGLARF 213
>gi|330808606|ref|YP_004353068.1| long-chain-fatty-acid--CoA ligase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327376714|gb|AEA68064.1| long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase)
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 565
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 84/174 (48%), Gaps = 42/174 (24%)
Query: 5 NPTD---LQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKE 59
PTD L+ +T+ + ++K++D IVP GEL RG+ MLGYW + + + +
Sbjct: 369 GPTDELELRVTTVGRTQPQLESKIIDEAGNIVPRDAVGELCTRGYSVMLGYWNNPKGSTD 428
Query: 60 TIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQ 119
I PD W+ TG D + E GY +
Sbjct: 429 AIDPDGWMHTG-------------------------------------DLATMDEQGYVR 451
Query: 120 VVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
+VGR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 452 IVGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 39/198 (19%)
Query: 294 PVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITPALKGL------YHFKKWMN 347
PV+L+ D LE+ + + + + K+ + N + A+ L W N
Sbjct: 363 PVSLQTGPTDELELRVTTVGRTQPQLESKIIDEAGNIVPRDAVGELCTRGYSVMLGYWNN 422
Query: 348 PKFSTTTRKVALTWPNSMDSEARIYHYKKYLREEENITVPDSAGRSIFEKDQFVLREDGY 407
PK ST +++D + ++ D + E GY
Sbjct: 423 PKGST----------DAIDPDGWMH-----------------------TGDLATMDEQGY 449
Query: 408 GQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 467
++VGR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 450 VRIVGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKFHPGH 509
Query: 468 KLNADDIRTFCKGKVSKF 485
+ +++ +CK +++ F
Sbjct: 510 SASEQELQAWCKERIAHF 527
>gi|26990171|ref|NP_745596.1| acyl-CoA synthetase [Pseudomonas putida KT2440]
gi|24985110|gb|AAN69060.1|AE016539_1 long-chain-fatty-acid-CoA ligase, putative [Pseudomonas putida
KT2440]
Length = 562
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 80/165 (48%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++KVVD VP G GEL RG+ MLGYW + + T E+I + W+ TG
Sbjct: 382 LESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAESIDAEGWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E GY ++VGR KDMIIRGGENIYP+
Sbjct: 434 -----------------------------DLAVMDEQGYVRIVGRSKDMIIRGGENIYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
E+EEF THP V + GVP + GEE+ ++L ++ E
Sbjct: 465 ELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRLHPGHAVSEVE 509
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V + GVP + GEE+
Sbjct: 434 DLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++L ++ ++R + + +++ F
Sbjct: 494 VAWVRLHPGHAVSEVELREWARARIAHF 521
>gi|392406245|ref|YP_006442855.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
gi|315024178|gb|ADT71659.1| putative acyl-CoA synthetase [Mycobacterium chubuense NBB4]
gi|390619381|gb|AFM20530.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
Length = 543
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 82/167 (49%), Gaps = 38/167 (22%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD V G+PGEL RG+ MLGYWE T I RW+ TG
Sbjct: 364 LEIKIVDPETGATVLRGSPGELCTRGYSVMLGYWERPDWTSGAIDAARWMHTG------- 416
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ + GY ++GR KDM+IRGGEN+YP
Sbjct: 417 ------------------------------DLAVMDDAGYVSIIGRNKDMVIRGGENLYP 446
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
+EIEEF+ THP +++ GVPD + GEE+ I++KE A+ ED
Sbjct: 447 REIEEFLYTHPEIVDVQVIGVPDPKYGEELMAWIRMKEGAQPLTRED 493
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 390 AGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 449
A R + D V+ + GY ++GR KDM+IRGGEN+YP+EIEEF+ THP +++ GVP
Sbjct: 409 AARWMHTGDLAVMDDAGYVSIIGRNKDMVIRGGENLYPREIEEFLYTHPEIVDVQVIGVP 468
Query: 450 DERMGEEVGISIKLKENAK-LNADDIRTFCKGKVSKF 485
D + GEE+ I++KE A+ L +D+ FC GK++ +
Sbjct: 469 DPKYGEELMAWIRMKEGAQPLTREDLHGFCAGKLAHY 505
>gi|398844830|ref|ZP_10601884.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
gi|398254189|gb|EJN39292.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
Length = 557
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 77/155 (49%), Gaps = 37/155 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ KVVD + VP G GEL RG+ MLGYW + + T ++I + W+ TG
Sbjct: 382 LENKVVDGDGNTVPCGEIGELCTRGYSVMLGYWNNPKATAQSIDAEGWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E GY ++VGR KDMIIRGGENIYP+
Sbjct: 434 -----------------------------DLAVMDEQGYVRIVGRSKDMIIRGGENIYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
E+EEF THP V + GVP R GEE+ ++L
Sbjct: 465 ELEEFFFTHPAVADVQVIGVPCSRYGEEIVAWVRL 499
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V + GVP R GEE+
Sbjct: 434 DLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSRYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++L + D++R + + +++ F
Sbjct: 494 VAWVRLHPGHVASEDELREWARARIAHF 521
>gi|294140897|ref|YP_003556875.1| long-chain-fatty-acid--CoA ligase [Shewanella violacea DSS12]
gi|293327366|dbj|BAJ02097.1| long-chain-fatty-acid--CoA ligase, putative [Shewanella violacea
DSS12]
Length = 588
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 81/155 (52%), Gaps = 37/155 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
Q K++D + V GE+ +G+C MLGYW D +KT+ TI WL +G
Sbjct: 407 QVKIIDESGDTVAINQSGEVCSKGYCVMLGYWNDVEKTQATIDSQGWLHSG--------- 457
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + ++GY ++VGRIKDMIIRGGENIYP+E
Sbjct: 458 ----------------------------DIGEMDDEGYVKIVGRIKDMIIRGGENIYPRE 489
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
IEE + +H +VL+A +GV ++ GEEV IKL+
Sbjct: 490 IEEKLYSHADVLDAAVFGVQSDKYGEEVCAWIKLR 524
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 59/84 (70%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ ++GY ++VGRIKDMIIRGGENIYP+EIEE + +H +VL+A +GV ++ GEEV I
Sbjct: 462 MDDEGYVKIVGRIKDMIIRGGENIYPREIEEKLYSHADVLDAAVFGVQSDKYGEEVCAWI 521
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
KL+ D+IR F K++ F
Sbjct: 522 KLRPGCLEIKDEIRHFLTDKIAYF 545
>gi|301061479|ref|ZP_07202243.1| putative long-chain-fatty-acid--CoA ligase [delta proteobacterium
NaphS2]
gi|300444397|gb|EFK08398.1| putative long-chain-fatty-acid--CoA ligase [delta proteobacterium
NaphS2]
Length = 515
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 82/171 (47%), Gaps = 38/171 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ ++VD N+ VP TPGE + RG M GYW+ + T ETI D WL TG
Sbjct: 343 EVRIVDRNDIEVPPDTPGEQVARGDNVMKGYWKLPEATAETI-VDGWLHTG--------- 392
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D E GY V RIKDMIIRGGEN+YP+E
Sbjct: 393 ----------------------------DICTKDEGGYVYYVDRIKDMIIRGGENVYPRE 424
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
IEE I HP+V E GVPDER+GEE+ I LK+ K E ++ D
Sbjct: 425 IEEVIAGHPSVFEVAVIGVPDERLGEEIMAVISLKKGHKAMEKEIATLCED 475
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 55/82 (67%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
E GY V RIKDMIIRGGEN+YP+EIEE I HP+V E GVPDER+GEE+ I L
Sbjct: 399 EGGYVYYVDRIKDMIIRGGENVYPREIEEVIAGHPSVFEVAVIGVPDERLGEEIMAVISL 458
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
K+ K +I T C+ ++++
Sbjct: 459 KKGHKAMEKEIATLCEDSLARY 480
>gi|359446340|ref|ZP_09236030.1| hypothetical protein P20439_2365 [Pseudoalteromonas sp. BSi20439]
gi|358039848|dbj|GAA72279.1| hypothetical protein P20439_2365 [Pseudoalteromonas sp. BSi20439]
Length = 577
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 81/161 (50%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D I G PGE+ RG M YW DE+KTK TI + WL +G
Sbjct: 400 EVKIIDEVGEIQKIGQPGEVCSRGAGIMRCYWNDEEKTKATIDNEGWLHSG--------- 450
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ +G+ +VGRIKDMIIRGGENIYP+E
Sbjct: 451 ----------------------------DLGVMDSEGFVSIVGRIKDMIIRGGENIYPRE 482
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + T+P + +A +G+ DE+ GEEV I+ KE L+
Sbjct: 483 IEEVLYTYPGIQDAAIFGISDEKFGEEVCAWIQPKEGEVLD 523
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +G+ +VGRIKDMIIRGGENIYP+EIEE + T+P + +A +G+ DE+ GEEV
Sbjct: 451 DLGVMDSEGFVSIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGISDEKFGEEV 510
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+ KE L+ IR F K K++ F
Sbjct: 511 CAWIQPKEGEVLDEQAIRLFLKDKLAYF 538
>gi|167033483|ref|YP_001668714.1| acyl-CoA synthetase [Pseudomonas putida GB-1]
gi|166859971|gb|ABY98378.1| AMP-dependent synthetase and ligase [Pseudomonas putida GB-1]
Length = 557
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 78/155 (50%), Gaps = 37/155 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ KV+D++ VP G GEL RG+ MLGYW + + T E+I D W+ TG
Sbjct: 382 LENKVIDNDGGTVPRGEIGELCTRGYSVMLGYWNNPKATAESIDEDGWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E GY ++VGR KDMIIRGGENIYP+
Sbjct: 434 -----------------------------DLAVMDEQGYVRIVGRSKDMIIRGGENIYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
E+EEF THP V + GVP + GEE+ ++L
Sbjct: 465 ELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRL 499
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V + GVP + GEE+
Sbjct: 434 DLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++L + +++R + K +++ F
Sbjct: 494 VAWVRLHPGHAASEEELREWAKARIAHF 521
>gi|386011894|ref|YP_005930171.1| Acyl-CoA synthetase [Pseudomonas putida BIRD-1]
gi|313498600|gb|ADR59966.1| Acyl-CoA synthetase [Pseudomonas putida BIRD-1]
Length = 557
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 80/165 (48%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++KVVD VP G GEL RG+ MLGYW + + T E+I + W+ TG
Sbjct: 382 LESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAESIDAEGWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E GY ++VGR KDMIIRGGENIYP+
Sbjct: 434 -----------------------------DLAVMDEQGYVRIVGRSKDMIIRGGENIYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
E+EEF THP V + GVP + GEE+ ++L ++ E
Sbjct: 465 ELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRLHPGHAVSEVE 509
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V + GVP + GEE+
Sbjct: 434 DLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++L ++ ++R + + +++ F
Sbjct: 494 VAWVRLHPGHAVSEVELREWARARIAHF 521
>gi|153001163|ref|YP_001366844.1| AMP-binding domain-containing protein [Shewanella baltica OS185]
gi|160875833|ref|YP_001555149.1| AMP-binding domain-containing protein [Shewanella baltica OS195]
gi|217972916|ref|YP_002357667.1| AMP-binding domain-containing protein [Shewanella baltica OS223]
gi|378709035|ref|YP_005273929.1| AMP-dependent synthetase and ligase [Shewanella baltica OS678]
gi|418024593|ref|ZP_12663575.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS625]
gi|151365781|gb|ABS08781.1| AMP-dependent synthetase and ligase [Shewanella baltica OS185]
gi|160861355|gb|ABX49889.1| AMP-dependent synthetase and ligase [Shewanella baltica OS195]
gi|217498051|gb|ACK46244.1| AMP-dependent synthetase and ligase [Shewanella baltica OS223]
gi|315268024|gb|ADT94877.1| AMP-dependent synthetase and ligase [Shewanella baltica OS678]
gi|353535879|gb|EHC05439.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS625]
Length = 570
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 80/161 (49%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD ++P PGE+ RG+C M YW D +KT TI WL +G
Sbjct: 393 EVKIVDEFGEVLPVNQPGEVCSRGYCIMQCYWNDPEKTAATIDSAGWLHSG--------- 443
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + E GY Q+VGRIKDMIIRGGENIYP+E
Sbjct: 444 ----------------------------DIGQMDEQGYVQIVGRIKDMIIRGGENIYPRE 475
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + TH +V +A +GV ++ GEEV IK++ + +
Sbjct: 476 IEEKLYTHKDVQDAAVFGVQSDKYGEEVCAWIKVRSGSAIT 516
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 381 EENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
E+ DSAG + D + E GY Q+VGRIKDMIIRGGENIYP+EIEE + TH +V
Sbjct: 428 EKTAATIDSAGW-LHSGDIGQMDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDV 486
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+A +GV ++ GEEV IK++ + + DDIR F K + F
Sbjct: 487 QDAAVFGVQSDKYGEEVCAWIKVRSGSAITEDDIRHFLTEKFAYF 531
>gi|407797844|ref|ZP_11144760.1| AMP-binding domain protein [Salimicrobium sp. MJ3]
gi|407017844|gb|EKE30600.1| AMP-binding domain protein [Salimicrobium sp. MJ3]
Length = 544
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 92/179 (51%), Gaps = 40/179 (22%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P DL+ ++ + + + KVV+ G PGEL RG+ M GY++DE+ T+ I
Sbjct: 353 DPIDLRVKSVGRAHPNVEVKVVEPATGEEAERGMPGELCTRGYLVMEGYYKDEESTETAI 412
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
PD WL TG D + E+GY ++
Sbjct: 413 DPDGWLHTG-------------------------------------DIAEMDENGYVEIT 435
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
GR+KDMIIRGGENIYP+EIEEF+ HP+VL+ G+PD GEE+ I KE+++++
Sbjct: 436 GRMKDMIIRGGENIYPREIEEFLYQHPDVLDVQVVGIPDATYGEEIMAWIIPKEDSEVS 494
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 62/83 (74%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ E+GY ++ GR+KDMIIRGGENIYP+EIEEF+ HP+VL+ G+PD GEE+ I
Sbjct: 426 MDENGYVEITGRMKDMIIRGGENIYPREIEEFLYQHPDVLDVQVVGIPDATYGEEIMAWI 485
Query: 462 KLKENAKLNADDIRTFCKGKVSK 484
KE+++++ DIR F +G++SK
Sbjct: 486 IPKEDSEVSEKDIRAFFEGEISK 508
>gi|386714460|ref|YP_006180783.1| long-chain-fatty-acid--CoA ligase [Halobacillus halophilus DSM
2266]
gi|384074016|emb|CCG45509.1| long-chain-fatty-acid--CoA ligase [Halobacillus halophilus DSM
2266]
Length = 546
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 92/178 (51%), Gaps = 40/178 (22%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVDHN-NRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ S++ + + + K++D G PGEL RG+ M GY+++++ T+ I
Sbjct: 353 DPIELRVSSVGKAHPNVEVKIIDPAIGDEAEAGIPGELCTRGYLVMEGYYKNQEATETAI 412
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
P+ WL TG D V+ EDGY ++
Sbjct: 413 DPEGWLHTG-------------------------------------DIAVMDEDGYIEIT 435
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKL 179
GR+KDMIIRGGEN+YP+EIEEF+ HP+VL+ GVPD++ GEE+ I KE +
Sbjct: 436 GRMKDMIIRGGENVYPREIEEFLYQHPDVLDVQVVGVPDQKYGEEIMAWIIPKEGKSI 493
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 64/87 (73%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDGY ++ GR+KDMIIRGGEN+YP+EIEEF+ HP+VL+ GVPD++ GEE+
Sbjct: 422 DIAVMDEDGYIEITGRMKDMIIRGGENVYPREIEEFLYQHPDVLDVQVVGVPDQKYGEEI 481
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
I KE + +DIR FC+G++SK
Sbjct: 482 MAWIIPKEGKSIEENDIRDFCEGQISK 508
>gi|289746287|ref|ZP_06505665.1| substrate-CoA ligase [Mycobacterium tuberculosis 02_1987]
gi|289686815|gb|EFD54303.1| substrate-CoA ligase [Mycobacterium tuberculosis 02_1987]
Length = 547
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 78/160 (48%), Gaps = 38/160 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD VP G GE RG+ M GYW D QKT E I D W+ TG
Sbjct: 369 LEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMHTG------- 421
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + GY ++ GRIKD+++RGGENI P
Sbjct: 422 ------------------------------DLAEMDPSGYVRIAGRIKDLVVRGGENISP 451
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEE + THP++++ + GVPD + GEE+ +KL+ +A
Sbjct: 452 REIEELLHTHPDIVDGHVIGVPDAKYGEELMAVVKLRNDA 491
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 406 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
GY ++ GRIKD+++RGGENI P+EIEE + THP++++ + GVPD + GEE+ +KL+
Sbjct: 430 GYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGEELMAVVKLRN 489
Query: 466 NA-KLNADDIRTFCKGKVSKF 485
+A +L + +R +C G++++F
Sbjct: 490 DAPELTIERLREYCMGRIARF 510
>gi|312134673|ref|YP_004002011.1| amp-dependent synthetase and ligase [Caldicellulosiruptor
owensensis OL]
gi|311774724|gb|ADQ04211.1| AMP-dependent synthetase and ligase [Caldicellulosiruptor
owensensis OL]
Length = 553
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 91/184 (49%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + + ST+ + K+VD H + VP G GE+ RG+ M GY++ + TK+ I
Sbjct: 353 DPLEFRVSTVGKPLEGVEVKIVDIHTKKEVPNGVIGEICARGYNIMKGYYKMPEATKQAI 412
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D + ++GY ++
Sbjct: 413 DEDGWLHTG-------------------------------------DLGYIDQNGYLRIT 435
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ THP V + GVPD+ GEE+ I LK+ K+
Sbjct: 436 GRLKDMIIRGGENIYPREIEEFLYTHPAVKDVQVVGVPDKVYGEEIAAFIILKDGCKVAE 495
Query: 182 YEDK 185
E K
Sbjct: 496 EEIK 499
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 59/83 (71%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ ++GY ++ GR+KDMIIRGGENIYP+EIEEF+ THP V + GVPD+ GEE+ I
Sbjct: 426 IDQNGYLRITGRLKDMIIRGGENIYPREIEEFLYTHPAVKDVQVVGVPDKVYGEEIAAFI 485
Query: 462 KLKENAKLNADDIRTFCKGKVSK 484
LK+ K+ ++I+ F K +++
Sbjct: 486 ILKDGCKVAEEEIKEFVKANLAR 508
>gi|378951790|ref|YP_005209278.1| acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Pseudomonas fluorescens F113]
gi|359761804|gb|AEV63883.1| Acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Pseudomonas fluorescens F113]
Length = 565
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 82/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D IV G GEL RG+ MLGYW + + T + I PD
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNIVSRGAVGELCTRGYSVMLGYWNNPKGTTDAIDPDG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + E GY ++VGR K
Sbjct: 435 WMHTG-------------------------------------DLATMDEQGYVRIVGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIIAWIKF 505
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 39/198 (19%)
Query: 294 PVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITPALKGL------YHFKKWMN 347
PV+L+ D LE+ + + + + K+ + N + A+ L W N
Sbjct: 363 PVSLQTGPSDELELRVTTVGRTQPQLESKIIDEAGNIVSRGAVGELCTRGYSVMLGYWNN 422
Query: 348 PKFSTTTRKVALTWPNSMDSEARIYHYKKYLREEENITVPDSAGRSIFEKDQFVLREDGY 407
PK +T +++D + ++ D + E GY
Sbjct: 423 PKGTT----------DAIDPDGWMH-----------------------TGDLATMDEQGY 449
Query: 408 GQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 467
++VGR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 450 VRIVGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIIAWIKFHPGH 509
Query: 468 KLNADDIRTFCKGKVSKF 485
+ +++ +CK +++ F
Sbjct: 510 SASEQELQAWCKERIAHF 527
>gi|421521513|ref|ZP_15968167.1| acyl-CoA synthetase [Pseudomonas putida LS46]
gi|402754665|gb|EJX15145.1| acyl-CoA synthetase [Pseudomonas putida LS46]
Length = 557
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 77/155 (49%), Gaps = 37/155 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++KVVD VP G GEL RG+ MLGYW + + T E+I + W+ TG
Sbjct: 382 LESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAESIDAEGWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E GY ++VGR KDMIIRGGENIYP+
Sbjct: 434 -----------------------------DLAVMDEQGYVRIVGRSKDMIIRGGENIYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
E+EEF THP V + GVP + GEE+ ++L
Sbjct: 465 ELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRL 499
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V + GVP + GEE+
Sbjct: 434 DLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++L ++ + +R + + +++ F
Sbjct: 494 VAWVRLHPGHAVSEEALREWARARIAHF 521
>gi|319950960|ref|ZP_08024832.1| AMP-binding domain protein [Dietzia cinnamea P4]
gi|319435382|gb|EFV90630.1| AMP-binding domain protein [Dietzia cinnamea P4]
Length = 549
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 84/179 (46%), Gaps = 44/179 (24%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K++D +P G GE RG+ MLGYWE KT E I W+ TG
Sbjct: 372 LEIKIIDPSTGETLPRGEAGEFCTRGYSVMLGYWEQPDKTAEAIDEAGWMHTG------- 424
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + DGY ++ GRIKDM+IRGGENIYP
Sbjct: 425 ------------------------------DIGEMDADGYVKITGRIKDMVIRGGENIYP 454
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDYHEFET 196
+E+EEF+ THP++L+A GVPD + GEE+ ++LK D + + EF T
Sbjct: 455 REVEEFLYTHPDILDAQVIGVPDPKYGEELMAWVRLKPG------RDDLTADEVREFAT 507
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY ++ GRIKDM+IRGGENIYP+E+EEF+ THP++L+A GVPD + GEE+ ++LK
Sbjct: 432 DGYVKITGRIKDMVIRGGENIYPREVEEFLYTHPDILDAQVIGVPDPKYGEELMAWVRLK 491
Query: 465 ENA-KLNADDIRTFCKGKVSK 484
L AD++R F GK+++
Sbjct: 492 PGRDDLTADEVREFATGKLAR 512
>gi|15609642|ref|NP_217021.1| Probable fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium tuberculosis
H37Rv]
gi|15842033|ref|NP_337070.1| AMP-binding protein [Mycobacterium tuberculosis CDC1551]
gi|31793685|ref|NP_856178.1| AMP-binding protein [Mycobacterium bovis AF2122/97]
gi|148662341|ref|YP_001283864.1| AMP-binding protein [Mycobacterium tuberculosis H37Ra]
gi|148823702|ref|YP_001288456.1| AMP-binding domain protein [Mycobacterium tuberculosis F11]
gi|167967650|ref|ZP_02549927.1| acyl-CoA synthetase [Mycobacterium tuberculosis H37Ra]
gi|253798415|ref|YP_003031416.1| AMP-binding protein [Mycobacterium tuberculosis KZN 1435]
gi|254232634|ref|ZP_04925961.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis C]
gi|254366808|ref|ZP_04982850.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis str.
Haarlem]
gi|254551552|ref|ZP_05141999.1| AMP-binding domain protein [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289444036|ref|ZP_06433780.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T46]
gi|289570665|ref|ZP_06450892.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T17]
gi|289575210|ref|ZP_06455437.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis K85]
gi|289751114|ref|ZP_06510492.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T92]
gi|289754614|ref|ZP_06513992.1| substrate-CoA ligase [Mycobacterium tuberculosis EAS054]
gi|289758637|ref|ZP_06518015.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis T85]
gi|289762673|ref|ZP_06522051.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis GM 1503]
gi|294994388|ref|ZP_06800079.1| AMP-binding domain protein [Mycobacterium tuberculosis 210]
gi|297635113|ref|ZP_06952893.1| AMP-binding domain protein [Mycobacterium tuberculosis KZN 4207]
gi|297732104|ref|ZP_06961222.1| AMP-binding domain protein [Mycobacterium tuberculosis KZN R506]
gi|298525977|ref|ZP_07013386.1| acyl-CoA synthetase [Mycobacterium tuberculosis 94_M4241A]
gi|306776778|ref|ZP_07415115.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu001]
gi|306780544|ref|ZP_07418881.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu002]
gi|306785305|ref|ZP_07423627.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu003]
gi|306789659|ref|ZP_07427981.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu004]
gi|306793986|ref|ZP_07432288.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu005]
gi|306798381|ref|ZP_07436683.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu006]
gi|306804261|ref|ZP_07440929.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu008]
gi|306807698|ref|ZP_07444366.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu007]
gi|306968658|ref|ZP_07481319.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu009]
gi|306972889|ref|ZP_07485550.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu010]
gi|307080602|ref|ZP_07489772.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu011]
gi|307085188|ref|ZP_07494301.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu012]
gi|313659438|ref|ZP_07816318.1| AMP-binding domain protein [Mycobacterium tuberculosis KZN V2475]
gi|339632531|ref|YP_004724173.1| fatty-acid-CoA ligase [Mycobacterium africanum GM041182]
gi|340627519|ref|YP_004745971.1| putative fatty-acid-CoA ligase FADD35 [Mycobacterium canettii CIPT
140010059]
gi|375295678|ref|YP_005099945.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis KZN 4207]
gi|385991815|ref|YP_005910113.1| AMP-binding protein [Mycobacterium tuberculosis CCDC5180]
gi|385995434|ref|YP_005913732.1| AMP-binding protein [Mycobacterium tuberculosis CCDC5079]
gi|385999285|ref|YP_005917584.1| AMP-binding protein [Mycobacterium tuberculosis CTRI-2]
gi|392387143|ref|YP_005308772.1| fadD35 [Mycobacterium tuberculosis UT205]
gi|392431886|ref|YP_006472930.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis KZN 605]
gi|397674409|ref|YP_006515944.1| fatty-acyl-CoA synthase [Mycobacterium tuberculosis H37Rv]
gi|422813553|ref|ZP_16861925.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CDC1551A]
gi|424804843|ref|ZP_18230274.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis W-148]
gi|424948174|ref|ZP_18363870.1| acyl-CoA synthetase [Mycobacterium tuberculosis NCGM2209]
gi|433627640|ref|YP_007261269.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140060008]
gi|13882311|gb|AAK46884.1| substrate--CoA ligase [Mycobacterium tuberculosis CDC1551]
gi|31619278|emb|CAD97394.1| PROBABLE FATTY-ACID-COA LIGASE FADD35 (FATTY-ACID-COA SYNTHETASE)
(FATTY-ACID-COA SYNTHASE) [Mycobacterium bovis
AF2122/97]
gi|124601693|gb|EAY60703.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis C]
gi|134152318|gb|EBA44363.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis str.
Haarlem]
gi|148506493|gb|ABQ74302.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis H37Ra]
gi|148722229|gb|ABR06854.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis F11]
gi|253319918|gb|ACT24521.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis KZN 1435]
gi|289416955|gb|EFD14195.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T46]
gi|289539641|gb|EFD44219.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis K85]
gi|289544419|gb|EFD48067.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T17]
gi|289691701|gb|EFD59130.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T92]
gi|289695201|gb|EFD62630.1| substrate-CoA ligase [Mycobacterium tuberculosis EAS054]
gi|289710179|gb|EFD74195.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis GM 1503]
gi|289714201|gb|EFD78213.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis T85]
gi|298495771|gb|EFI31065.1| acyl-CoA synthetase [Mycobacterium tuberculosis 94_M4241A]
gi|308214839|gb|EFO74238.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu001]
gi|308326610|gb|EFP15461.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu002]
gi|308330032|gb|EFP18883.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu003]
gi|308333876|gb|EFP22727.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu004]
gi|308337676|gb|EFP26527.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu005]
gi|308341357|gb|EFP30208.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu006]
gi|308345886|gb|EFP34737.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu007]
gi|308349149|gb|EFP38000.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu008]
gi|308353773|gb|EFP42624.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu009]
gi|308357716|gb|EFP46567.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu010]
gi|308361656|gb|EFP50507.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu011]
gi|308365268|gb|EFP54119.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu012]
gi|323718913|gb|EGB28067.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CDC1551A]
gi|326904119|gb|EGE51052.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis W-148]
gi|328458183|gb|AEB03606.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis KZN 4207]
gi|339295388|gb|AEJ47499.1| AMP-binding domain protein [Mycobacterium tuberculosis CCDC5079]
gi|339299008|gb|AEJ51118.1| AMP-binding domain protein [Mycobacterium tuberculosis CCDC5180]
gi|339331887|emb|CCC27590.1| putative fatty-acid-CoA ligase FADD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium africanum
GM041182]
gi|340005709|emb|CCC44875.1| putative fatty-acid-CoA ligase FADD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140010059]
gi|344220332|gb|AEN00963.1| AMP-binding domain protein [Mycobacterium tuberculosis CTRI-2]
gi|358232689|dbj|GAA46181.1| acyl-CoA synthetase [Mycobacterium tuberculosis NCGM2209]
gi|378545694|emb|CCE37972.1| fadD35 [Mycobacterium tuberculosis UT205]
gi|379028808|dbj|BAL66541.1| acyl-CoA synthetase [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
gi|392053295|gb|AFM48853.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis KZN 605]
gi|395139314|gb|AFN50473.1| fatty-acyl-CoA synthase [Mycobacterium tuberculosis H37Rv]
gi|432155246|emb|CCK52492.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140060008]
gi|440581981|emb|CCG12384.1| putative FATTY-ACID-CoA LIGASE FADD35 (FATTY-ACID-CoA SYNTHETASE)
(FATTY-ACID-CoA SYNTHASE) [Mycobacterium tuberculosis
7199-99]
gi|444896038|emb|CCP45299.1| Probable fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium tuberculosis
H37Rv]
Length = 547
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 78/160 (48%), Gaps = 38/160 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD VP G GE RG+ M GYW D QKT E I D W+ TG
Sbjct: 369 LEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMHTG------- 421
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + GY ++ GRIKD+++RGGENI P
Sbjct: 422 ------------------------------DLAEMDPSGYVRIAGRIKDLVVRGGENISP 451
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEE + THP++++ + GVPD + GEE+ +KL+ +A
Sbjct: 452 REIEELLHTHPDIVDGHVIGVPDAKYGEELMAVVKLRNDA 491
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 406 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
GY ++ GRIKD+++RGGENI P+EIEE + THP++++ + GVPD + GEE+ +KL+
Sbjct: 430 GYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGEELMAVVKLRN 489
Query: 466 NA-KLNADDIRTFCKGKVSKF 485
+A +L + +R +C G++++F
Sbjct: 490 DAPELTIERLREYCMGRIARF 510
>gi|56420133|ref|YP_147451.1| AMP-binding protein [Geobacillus kaustophilus HTA426]
gi|375008623|ref|YP_004982256.1| acyl-CoA synthetase yngI [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56379975|dbj|BAD75883.1| fatty-acid-CoA ligase [Geobacillus kaustophilus HTA426]
gi|359287472|gb|AEV19156.1| acyl-CoA synthetase yngI [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 544
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 89/182 (48%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + + K+V+ N+ VP G GEL RG+ M GY+ + + T E I
Sbjct: 351 DPLELRVETVGRALPGVEVKIVEPGTNKEVPPGVQGELCTRGYHVMKGYYNNPEATNEAI 410
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D + E+GY ++
Sbjct: 411 DQDGWLHTG-------------------------------------DLATMDENGYFRIT 433
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ HP +L+ GVPDE GEEV I LK+ A
Sbjct: 434 GRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVGVPDEVYGEEVMAWIILKDGETATA 493
Query: 182 YE 183
E
Sbjct: 494 EE 495
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 61/87 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY ++ GR+KDMIIRGGENIYP+EIEEF+ HP +L+ GVPDE GEEV
Sbjct: 420 DLATMDENGYFRITGRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVGVPDEVYGEEV 479
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
I LK+ A++IR FC+G +S+
Sbjct: 480 MAWIILKDGETATAEEIREFCRGHISR 506
>gi|289448150|ref|ZP_06437894.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CPHL_A]
gi|289421108|gb|EFD18309.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CPHL_A]
Length = 547
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 78/160 (48%), Gaps = 38/160 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD VP G GE RG+ M GYW D QKT E I D W+ TG
Sbjct: 369 LEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMHTG------- 421
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + GY ++ GRIKD+++RGGENI P
Sbjct: 422 ------------------------------DLAEMDPSGYVRIAGRIKDLVVRGGENISP 451
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEE + THP++++ + GVPD + GEE+ +KL+ +A
Sbjct: 452 REIEELLHTHPDIVDGHVIGVPDAKYGEELMAVVKLRNDA 491
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 406 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
GY ++ GRIKD+++RGGENI P+EIEE + THP++++ + GVPD + GEE+ +KL+
Sbjct: 430 GYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGEELMAVVKLRN 489
Query: 466 NA-KLNADDIRTFCKGKVSKF 485
+A +L + +R +C G++++F
Sbjct: 490 DAPELTIERLREYCMGRIARF 510
>gi|119474942|ref|ZP_01615295.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2143]
gi|119451145|gb|EAW32378.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2143]
Length = 557
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 37/165 (22%)
Query: 17 SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTS 76
++++ K++ + GE+ RG+ M GYWED ++T +TI D WL +G
Sbjct: 380 TNWEMKIIREDGSTAATEETGEVCARGYGVMQGYWEDAERTADTIDSDGWLHSG------ 433
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
D + +G+ ++ GRIKDMIIRGGENIY
Sbjct: 434 -------------------------------DLGEMDAEGFVKITGRIKDMIIRGGENIY 462
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
P+E+EEF +HP + E +GVPDE+ GE+V I+LKE ++A
Sbjct: 463 PREVEEFFYSHPAIQEVQVFGVPDEKYGEQVAAWIQLKEGQSMSA 507
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 61/81 (75%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
+G+ ++ GRIKDMIIRGGENIYP+E+EEF +HP + E +GVPDE+ GE+V I+LK
Sbjct: 441 EGFVKITGRIKDMIIRGGENIYPREVEEFFYSHPAIQEVQVFGVPDEKYGEQVAAWIQLK 500
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
E ++A+ ++ +C G+++ +
Sbjct: 501 EGQSMSAEALQQYCAGQITHY 521
>gi|302871381|ref|YP_003840017.1| AMP-dependent synthetase and ligase [Caldicellulosiruptor
obsidiansis OB47]
gi|302574240|gb|ADL42031.1| AMP-dependent synthetase and ligase [Caldicellulosiruptor
obsidiansis OB47]
Length = 553
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 91/184 (49%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + + ST+ + K+VD H + VP G GE+ RG+ M GY++ + TK+ I
Sbjct: 353 DPLEFRVSTVGKPLEGVEVKIVDIHTKKEVPNGVIGEICARGYNIMKGYYKMPEATKQAI 412
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D + ++GY ++
Sbjct: 413 DEDGWLHTG-------------------------------------DLGYIDQNGYLRIT 435
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ THP V + GVPD+ GEE+ I LK+ K+
Sbjct: 436 GRLKDMIIRGGENIYPREIEEFLYTHPAVKDVQVVGVPDKVYGEEIAAFIILKDGCKVAE 495
Query: 182 YEDK 185
E K
Sbjct: 496 EEIK 499
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 59/83 (71%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ ++GY ++ GR+KDMIIRGGENIYP+EIEEF+ THP V + GVPD+ GEE+ I
Sbjct: 426 IDQNGYLRITGRLKDMIIRGGENIYPREIEEFLYTHPAVKDVQVVGVPDKVYGEEIAAFI 485
Query: 462 KLKENAKLNADDIRTFCKGKVSK 484
LK+ K+ ++I+ F K +++
Sbjct: 486 ILKDGCKVAEEEIKEFVKANLAR 508
>gi|86136427|ref|ZP_01055006.1| acyl-CoA synthase [Roseobacter sp. MED193]
gi|85827301|gb|EAQ47497.1| acyl-CoA synthase [Roseobacter sp. MED193]
Length = 590
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 85/178 (47%), Gaps = 40/178 (22%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+PT+ + T+ + K +D + +I P G GEL RG+ M GYW + +KT ++I
Sbjct: 394 DPTEKRCETVGRVHPHLEVKCIDQHGQITPVGVQGELCTRGYSVMKGYWGNPEKTAQSIR 453
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
D W+ TG D VL DG + G
Sbjct: 454 -DGWMHTG-------------------------------------DLAVLDRDGVCTITG 475
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
R+KDMIIRGGENIYP+EIE ++ HP V + +G+PDE++GE V + K LN
Sbjct: 476 RVKDMIIRGGENIYPREIEAYLMRHPLVSDVQVFGIPDEKLGEVVCAWVTAKPGETLN 533
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D VL DG + GR+KDMIIRGGENIYP+EIE ++ HP V + +G+PDE++GE V
Sbjct: 461 DLAVLDRDGVCTITGRVKDMIIRGGENIYPREIEAYLMRHPLVSDVQVFGIPDEKLGEVV 520
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ K LN + FC+G+++ F
Sbjct: 521 CAWVTAKPGETLNEKQLSAFCQGQIAHF 548
>gi|442318693|ref|YP_007358714.1| AMP-binding protein [Myxococcus stipitatus DSM 14675]
gi|441486335|gb|AGC43030.1| AMP-binding protein [Myxococcus stipitatus DSM 14675]
Length = 594
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 85/179 (47%), Gaps = 40/179 (22%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P D + ST+ + KVV+ +VP G+ GE+ RG+ MLGYW + + T + +
Sbjct: 394 DPLDKRVSTVGRVHPHLEVKVVEPETGAVVPRGSAGEMCTRGYSVMLGYWANPEATAKAV 453
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
W+ TG D + DGY ++V
Sbjct: 454 DAAGWMHTG-------------------------------------DLATMDADGYVRIV 476
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
GRIKD+IIRGGENI P+E+EEF+ THP V EA GVP + GEEV +K K L
Sbjct: 477 GRIKDLIIRGGENISPREVEEFLHTHPGVSEAQVIGVPSAKYGEEVMAWVKPKPGVTLT 535
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 388 DSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYG 447
D+AG + D + DGY ++VGRIKD+IIRGGENI P+E+EEF+ THP V EA G
Sbjct: 454 DAAGW-MHTGDLATMDADGYVRIVGRIKDLIIRGGENISPREVEEFLHTHPGVSEAQVIG 512
Query: 448 VPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
VP + GEEV +K K L + + C G+++ F
Sbjct: 513 VPSAKYGEEVMAWVKPKPGVTLTPEQLTRHCSGRIATF 550
>gi|425734007|ref|ZP_18852327.1| AMP-binding domain protein [Brevibacterium casei S18]
gi|425482447|gb|EKU49604.1| AMP-binding domain protein [Brevibacterium casei S18]
Length = 561
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 82/167 (49%), Gaps = 38/167 (22%)
Query: 19 FQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + +P G GEL RG+ MLGYWE+ +KT E I RW+ TG
Sbjct: 384 VEVKIVDPVTGQTMPRGQKGELCTRGYSVMLGYWEEPEKTAEAIDSARWMHTG------- 436
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D ++ +DGY + GRIKDM+IRGGEN+YP
Sbjct: 437 ------------------------------DLAIMDDDGYVDISGRIKDMVIRGGENVYP 466
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
+EIEEF+ HP + + GV DE+ GEE+ + LK+ ED
Sbjct: 467 REIEEFLYQHPAISDVQVIGVSDEKYGEELMAWVILKDGYDTLTAED 513
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y E E + R + D ++ +DGY + GRIKDM+IRGGEN+YP+EIEEF+
Sbjct: 416 YWEEPEKTAEAIDSARWMHTGDLAIMDDDGYVDISGRIKDMVIRGGENVYPREIEEFLYQ 475
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKEN-AKLNADDIRTFCKGKVSKF 485
HP + + GV DE+ GEE+ + LK+ L A+D+R F G+++ F
Sbjct: 476 HPAISDVQVIGVSDEKYGEELMAWVILKDGYDTLTAEDVREFAAGRLAHF 525
>gi|397694374|ref|YP_006532255.1| acyl-CoA synthetase [Pseudomonas putida DOT-T1E]
gi|298682215|gb|ADI95281.1| putative acyl-CoA synthetase [Pseudomonas putida DOT-T1E]
gi|397331104|gb|AFO47463.1| acyl-CoA synthetase [Pseudomonas putida DOT-T1E]
Length = 557
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 77/155 (49%), Gaps = 37/155 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++KVVD VP G GEL RG+ MLGYW + + T E+I + W+ TG
Sbjct: 382 LESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAESIDAEGWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E GY ++VGR KDMIIRGGENIYP+
Sbjct: 434 -----------------------------DLAVMDEQGYVRIVGRSKDMIIRGGENIYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
E+EEF THP V + GVP + GEE+ ++L
Sbjct: 465 ELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRL 499
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V + GVP + GEE+
Sbjct: 434 DLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++L ++ + +R + + +++ F
Sbjct: 494 VAWVRLHPGHAVSEEALREWARARIAHF 521
>gi|121638387|ref|YP_978611.1| AMP-binding protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990881|ref|YP_002645568.1| AMP-binding protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378772241|ref|YP_005171974.1| Fatty-acid-CoA ligase [Mycobacterium bovis BCG str. Mexico]
gi|449064578|ref|YP_007431661.1| AMP-binding domain protein [Mycobacterium bovis BCG str. Korea
1168P]
gi|121494035|emb|CAL72513.1| Probable fatty-acid-CoA ligase fadD35 [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773994|dbj|BAH26800.1| acyl-CoA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
gi|341602425|emb|CCC65101.1| probable fatty-acid-CoA ligase fadD35 [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|356594562|gb|AET19791.1| Fatty-acid-CoA ligase [Mycobacterium bovis BCG str. Mexico]
gi|449033086|gb|AGE68513.1| AMP-binding domain protein [Mycobacterium bovis BCG str. Korea
1168P]
Length = 547
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 78/160 (48%), Gaps = 38/160 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD VP G GE RG+ M GYW D QKT E I D W+ TG
Sbjct: 369 LEIKVVDPATGEAVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMHTG------- 421
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + GY ++ GRIKD+++RGGENI P
Sbjct: 422 ------------------------------DLAEMDPSGYVRIAGRIKDLVVRGGENISP 451
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEE + THP++++ + GVPD + GEE+ +KL+ +A
Sbjct: 452 REIEELLHTHPDIVDGHVIGVPDAKYGEELMAVVKLRNDA 491
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 406 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
GY ++ GRIKD+++RGGENI P+EIEE + THP++++ + GVPD + GEE+ +KL+
Sbjct: 430 GYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGEELMAVVKLRN 489
Query: 466 NA-KLNADDIRTFCKGKVSKF 485
+A +L + +R +C G++++F
Sbjct: 490 DAPELTIERLREYCMGRIARF 510
>gi|433631621|ref|YP_007265249.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070010]
gi|432163214|emb|CCK60616.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070010]
Length = 547
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 78/160 (48%), Gaps = 38/160 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD VP G GE RG+ M GYW D QKT E I D W+ TG
Sbjct: 369 LEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMHTG------- 421
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + GY ++ GRIKD+++RGGENI P
Sbjct: 422 ------------------------------DLAEMDPSGYVRIAGRIKDLVVRGGENISP 451
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEE + THP++++ + GVPD + GEE+ +KL+ +A
Sbjct: 452 REIEELLHTHPDIVDGHVIGVPDAKYGEELMAVVKLRNDA 491
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 406 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
GY ++ GRIKD+++RGGENI P+EIEE + THP++++ + GVPD + GEE+ +KL+
Sbjct: 430 GYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGEELMAVVKLRN 489
Query: 466 NA-KLNADDIRTFCKGKVSKF 485
+A +L + +R +C G++++F
Sbjct: 490 DAPELTIERLREYCMGRIARF 510
>gi|423696441|ref|ZP_17670931.1| long-chain-fatty-acid--CoA ligase Acs [Pseudomonas fluorescens
Q8r1-96]
gi|388003967|gb|EIK65294.1| long-chain-fatty-acid--CoA ligase Acs [Pseudomonas fluorescens
Q8r1-96]
Length = 565
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 84/174 (48%), Gaps = 42/174 (24%)
Query: 5 NPTD---LQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKE 59
PTD L+ +T+ + ++K++D IVP GEL RG+ MLGYW + + + +
Sbjct: 369 GPTDELELRVTTVGRTQPQLESKIIDEAGNIVPRDAVGELCTRGYSVMLGYWNNPKGSTD 428
Query: 60 TIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQ 119
I PD W+ TG D + E GY +
Sbjct: 429 AIDPDGWMHTG-------------------------------------DLATMDEQGYVR 451
Query: 120 VVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
+VGR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 452 IVGRNKDMIIRGGENIYPRELEEFFFTHPVVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 39/198 (19%)
Query: 294 PVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITPALKGL------YHFKKWMN 347
PV+L+ D LE+ + + + + K+ + N + A+ L W N
Sbjct: 363 PVSLQTGPTDELELRVTTVGRTQPQLESKIIDEAGNIVPRDAVGELCTRGYSVMLGYWNN 422
Query: 348 PKFSTTTRKVALTWPNSMDSEARIYHYKKYLREEENITVPDSAGRSIFEKDQFVLREDGY 407
PK ST +++D + ++ D + E GY
Sbjct: 423 PKGST----------DAIDPDGWMH-----------------------TGDLATMDEQGY 449
Query: 408 GQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 467
++VGR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 450 VRIVGRNKDMIIRGGENIYPRELEEFFFTHPVVADVQVIGIPCSRYGEEIVAWIKFHPGH 509
Query: 468 KLNADDIRTFCKGKVSKF 485
+ +++ +CK +++ F
Sbjct: 510 SASEQELQAWCKERIAHF 527
>gi|402699063|ref|ZP_10847042.1| AMP-binding domain protein [Pseudomonas fragi A22]
Length = 560
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 86/181 (47%), Gaps = 39/181 (21%)
Query: 8 DLQFSTLSSSSFQA--KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + Q K++D +V G GEL RG+ MLGYW + Q T+E I +
Sbjct: 372 ELRVTTVGRTQPQLENKLIDAEGNVVVRGAIGELCTRGYSVMLGYWNNPQATREAIDSEG 431
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + E GY ++VGR K
Sbjct: 432 WMHTG-------------------------------------DLAQMDEQGYVRIVGRNK 454
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
DMIIRGGENIYP+E+EEF THP V + G+PD R GEE+ IK N E +
Sbjct: 455 DMIIRGGENIYPRELEEFFFTHPAVADVQVVGIPDARYGEEIVAWIKFHPGHTANELELQ 514
Query: 186 S 186
+
Sbjct: 515 T 515
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 56/84 (66%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V + G+PD R GEE+ I
Sbjct: 441 MDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVVGIPDARYGEEIVAWI 500
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
K N +++T+CK +++ F
Sbjct: 501 KFHPGHTANELELQTWCKSRIAHF 524
>gi|70731294|ref|YP_261035.1| AMP-binding protein [Pseudomonas protegens Pf-5]
gi|68345593|gb|AAY93199.1| long-chain-fatty-acid--CoA ligase [Pseudomonas protegens Pf-5]
Length = 567
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 85/178 (47%), Gaps = 39/178 (21%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D +VP GT GEL RG+ MLGYW + + T+E+I
Sbjct: 375 ELRVTTVGRTQPHLESKIIDEAGNVVPRGTIGELCTRGYSVMLGYWNNPEGTRESIDQAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + + GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLATMNQQGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
DMIIRGGENIYP+E+EEF THP V + G+P +R GEE+ IK N E
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCDRYGEEIVAWIKFHPGHSANELE 515
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + + GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P +R GEE+
Sbjct: 440 DLATMNQQGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCDRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK N +++T+CK +++ F
Sbjct: 500 VAWIKFHPGHSANELELQTWCKERIAHF 527
>gi|433642703|ref|YP_007288462.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070008]
gi|432159251|emb|CCK56555.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070008]
Length = 547
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 78/160 (48%), Gaps = 38/160 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KVVD VP G GE RG+ M GYW D QKT E I D W+ TG
Sbjct: 369 LEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMHTG------- 421
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + GY ++ GRIKD+++RGGENI P
Sbjct: 422 ------------------------------DLAEMDPSGYVRIAGRIKDLVVRGGENISP 451
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEE + THP++++ + GVPD + GEE+ +KL+ +A
Sbjct: 452 REIEELLHTHPDIVDGHVIGVPDAKYGEELMAVVKLRNDA 491
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 406 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
GY ++ GRIKD+++RGGENI P+EIEE + THP++++ + GVPD + GEE+ +KL+
Sbjct: 430 GYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGEELMAVVKLRN 489
Query: 466 NA-KLNADDIRTFCKGKVSKF 485
+A +L + +R +C G++++F
Sbjct: 490 DAPELTIERLREYCMGRIARF 510
>gi|120599150|ref|YP_963724.1| AMP-binding protein [Shewanella sp. W3-18-1]
gi|120559243|gb|ABM25170.1| AMP-dependent synthetase and ligase [Shewanella sp. W3-18-1]
Length = 570
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 80/161 (49%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D ++P PGE+ RG+C M YW D +KT TI WL +G
Sbjct: 393 EVKIIDEFGEVLPINQPGEVCSRGYCIMQCYWNDPEKTAATIDSASWLHSG--------- 443
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + E GY Q+VGRIKDMIIRGGENIYP+E
Sbjct: 444 ----------------------------DIGQMDEQGYVQIVGRIKDMIIRGGENIYPRE 475
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + TH +V +A +GV ++ GEEV IK++ + +
Sbjct: 476 IEEKLYTHKDVQDAAVFGVQSDKYGEEVCAWIKVRSGSIIT 516
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ E GY Q+VGRIKDMIIRGGENIYP+EIEE + TH +V +A +GV ++ GEEV I
Sbjct: 448 MDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVQSDKYGEEVCAWI 507
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
K++ + + DIR F K + F
Sbjct: 508 KVRSGSIITEADIRHFLTEKFAYF 531
>gi|359452445|ref|ZP_09241793.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. BSi20495]
gi|358050423|dbj|GAA78042.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. BSi20495]
Length = 577
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 82/161 (50%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D I G PGE+ +G M YW DE KTK TI + WL +G
Sbjct: 400 EVKIIDELGNIQKIGQPGEVCSKGAGIMRCYWNDETKTKATIDEEGWLHSG--------- 450
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ +G+ +VGRIKDMIIRGGENIYP+E
Sbjct: 451 ----------------------------DLGVMDTEGFVTIVGRIKDMIIRGGENIYPRE 482
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + T+P + +A +G+ DE+ GEEV I+ KE+A L+
Sbjct: 483 IEEVLYTYPGIQDAAIFGITDEKYGEEVCAWIQPKEDAVLD 523
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +G+ +VGRIKDMIIRGGENIYP+EIEE + T+P + +A +G+ DE+ GEEV
Sbjct: 451 DLGVMDTEGFVTIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGITDEKYGEEV 510
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+ KE+A L+ IR F K K++ F
Sbjct: 511 CAWIQPKEDAVLDEQAIRDFLKDKLAYF 538
>gi|398991917|ref|ZP_10694998.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM24]
gi|399015364|ref|ZP_10717637.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM16]
gi|398108615|gb|EJL98568.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM16]
gi|398136210|gb|EJM25304.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM24]
Length = 565
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 81/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D +VP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQATAEAIDEAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + E+GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNEEGYVNIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNEEGYVNIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK + +++T+CK +++ F
Sbjct: 500 VAWIKFHPGHNASELELQTWCKERIAHF 527
>gi|148547532|ref|YP_001267634.1| acyl-CoA synthetase [Pseudomonas putida F1]
gi|395449760|ref|YP_006390013.1| acyl-CoA synthetase [Pseudomonas putida ND6]
gi|148511590|gb|ABQ78450.1| AMP-dependent synthetase and ligase [Pseudomonas putida F1]
gi|388563757|gb|AFK72898.1| acyl-CoA synthetase [Pseudomonas putida ND6]
Length = 557
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 77/155 (49%), Gaps = 37/155 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++KVVD VP G GEL RG+ MLGYW + + T E+I + W+ TG
Sbjct: 382 LESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAESIDAEGWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E GY ++VGR KDMIIRGGENIYP+
Sbjct: 434 -----------------------------DLAVMDEQGYVRIVGRSKDMIIRGGENIYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
E+EEF THP V + GVP + GEE+ ++L
Sbjct: 465 ELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRL 499
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V + GVP + GEE+
Sbjct: 434 DLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++L ++ D +R + + +++ F
Sbjct: 494 VAWVRLHPGHAVSEDALREWARARIAHF 521
>gi|352106214|ref|ZP_08961265.1| long-chain-fatty-acid--CoA ligase [Halomonas sp. HAL1]
gi|350597862|gb|EHA13987.1| long-chain-fatty-acid--CoA ligase [Halomonas sp. HAL1]
Length = 561
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 91/179 (50%), Gaps = 41/179 (22%)
Query: 5 NPTD-LQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
NPTD +Q T+ + KVVD + VP G PGEL ++G M GYW+ E +T+ +I
Sbjct: 368 NPTDAIQLGTIGKPVAGTAVKVVDADGNDVPMGEPGELCVQGPQVMKGYWQREDETRVSI 427
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W TG D VL++DGY ++V
Sbjct: 428 DGDGWFHTG-------------------------------------DIAVLQDDGYIRIV 450
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
R KDMI+ G N+YP E+E+ + HP+VLE+ A GVPDE GE + + + + +N++L+
Sbjct: 451 DRKKDMILVSGFNVYPNEVEDVVAAHPDVLESAAVGVPDENAGEAIKLFV-VSKNSQLD 508
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D VL++DGY ++V R KDMI+ G N+YP E+E+ + HP+VLE+ A GVPDE GE +
Sbjct: 437 DIAVLQDDGYIRIVDRKKDMILVSGFNVYPNEVEDVVAAHPDVLESAAVGVPDENAGEAI 496
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ + + +N++L+ +R +CK +++ +
Sbjct: 497 KLFV-VSKNSQLDEKTLRDWCKKELTGY 523
>gi|452853284|ref|YP_007494968.1| acyl-CoA synthetase yngI [Desulfovibrio piezophilus]
gi|451896938|emb|CCH49817.1| acyl-CoA synthetase yngI [Desulfovibrio piezophilus]
Length = 546
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 64/88 (72%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDGY + GR+KDMIIRGGENIYP+EIEEF+ T +L+ GVP R+GEEV
Sbjct: 423 DLGVMDEDGYLSITGRLKDMIIRGGENIYPREIEEFLYTMDGILDVQVAGVPSARLGEEV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
G + LKE+A L +D+ +C+GK+S++
Sbjct: 483 GAFVILKEDADLMPEDVMDYCRGKISRY 510
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 73/146 (50%), Gaps = 37/146 (25%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GE+ RG+ M GY+ + + T E I + WL +G
Sbjct: 386 GIQGEVCCRGYNVMEGYYNNPKGTAEAIDANGWLHSG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY + GR+KDMIIRGGENIYP+EIEEF+ T +L+
Sbjct: 423 --------------DLGVMDEDGYLSITGRLKDMIIRGGENIYPREIEEFLYTMDGILDV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKL 179
GVP R+GEEVG + LKE+A L
Sbjct: 469 QVAGVPSARLGEEVGAFVILKEDADL 494
>gi|449543812|gb|EMD34787.1| hypothetical protein CERSUDRAFT_116973 [Ceriporiopsis subvermispora
B]
Length = 638
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 82/160 (51%), Gaps = 33/160 (20%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AKVVD +VP GTPGE++I G+ GYW+DE +T + +
Sbjct: 439 VRAKVVDLEGNVVPVGTPGEIMIAGYLLQKGYWKDEAQTAKVM----------------- 481
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
++ + G + D+ ++ E+GY +VVGRIKD+IIRGGEN++P
Sbjct: 482 ----------------RKDEEGTLWMYTGDEGIMDEEGYLRVVGRIKDIIIRGGENLFPV 525
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+IE + HP + EA VPD R GE VG I +AK
Sbjct: 526 QIENVLMEHPTIREAAVVSVPDPRFGETVGTWIVRAPSAK 565
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
++ D+ ++ E+GY +VVGRIKD+IIRGGEN++P +IE + HP + EA VPD R
Sbjct: 491 MYTGDEGIMDEEGYLRVVGRIKDIIIRGGENLFPVQIENVLMEHPTIREAAVVSVPDPRF 550
Query: 454 GEEVGISIKLKENAK--LNADDIRTFCKGKVS 483
GE VG I +AK L +++ F G+++
Sbjct: 551 GETVGTWIVRAPSAKEPLTRANVKAFVAGRMN 582
>gi|414068972|ref|ZP_11404968.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. Bsw20308]
gi|410808430|gb|EKS14400.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. Bsw20308]
Length = 577
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 82/161 (50%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D I G PGE+ +G M YW DE KTK TI + WL +G
Sbjct: 400 EVKIIDELGNIQKIGQPGEVCSKGAGIMRCYWNDEAKTKATIDDEGWLHSG--------- 450
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ +G+ +VGRIKDMIIRGGENIYP+E
Sbjct: 451 ----------------------------DLGVMDTEGFVTIVGRIKDMIIRGGENIYPRE 482
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + T+P + +A +G+ DE+ GEEV I+ KE+A L+
Sbjct: 483 IEEVLYTYPGIQDAAIFGITDEKYGEEVCAWIQPKEDAVLD 523
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +G+ +VGRIKDMIIRGGENIYP+EIEE + T+P + +A +G+ DE+ GEEV
Sbjct: 451 DLGVMDTEGFVTIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGITDEKYGEEV 510
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+ KE+A L+ IR F K K++ F
Sbjct: 511 CAWIQPKEDAVLDEQAIRDFLKDKLAYF 538
>gi|359441402|ref|ZP_09231302.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. BSi20429]
gi|358036872|dbj|GAA67551.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. BSi20429]
Length = 577
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 82/161 (50%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D I G PGE+ +G M YW D+ KTK TI + WL +G
Sbjct: 400 EVKIIDELGNIQQIGQPGEVCSKGAGIMRCYWNDDAKTKATIDDNGWLHSG--------- 450
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ +G+ +VGRIKDMIIRGGENIYP+E
Sbjct: 451 ----------------------------DLGVMDTEGFVTIVGRIKDMIIRGGENIYPRE 482
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + T+P + +A +G+ DER GEEV I+ KE+A L+
Sbjct: 483 IEEVLYTYPGIQDAAIFGITDERYGEEVCAWIQPKEDAVLD 523
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +G+ +VGRIKDMIIRGGENIYP+EIEE + T+P + +A +G+ DER GEEV
Sbjct: 451 DLGVMDTEGFVTIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGITDERYGEEV 510
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+ KE+A L+ IR F K +++ F
Sbjct: 511 CAWIQPKEDAVLDEQAIREFLKDELAYF 538
>gi|398852244|ref|ZP_10608909.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM80]
gi|398244606|gb|EJN30150.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM80]
Length = 565
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 81/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D +VP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWSNPQATAEAIDEAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + E+GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNEEGYVNIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGEN+YP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENVYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY + GR KDMIIRGGEN+YP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNEEGYVNIAGRNKDMIIRGGENVYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK + +++T+CK +++ F
Sbjct: 500 VAWIKFHPGHNASELELQTWCKERIAHF 527
>gi|357040246|ref|ZP_09102035.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355356910|gb|EHG04691.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 554
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 95/188 (50%), Gaps = 40/188 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ ST+ + + K+VD N VP G GE+ RG+ M GY++ + T I
Sbjct: 355 DPLELRVSTVGKALDGVEVKIVDPENGEEVPAGVQGEICARGYNVMKGYYKMPEATAAAI 414
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ WL TG D ++ E+GY ++
Sbjct: 415 DQEGWLHTG-------------------------------------DLGIMDENGYLRIT 437
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIKDMIIRGGENIYP+EIEEF+ T+P V + GVP E+ GEEV I+LK ++++
Sbjct: 438 GRIKDMIIRGGENIYPREIEEFLYTYPQVKDVQVVGVPSEKYGEEVMAFIQLKAGSRVSV 497
Query: 182 YEDKSISS 189
+ K+ S
Sbjct: 498 EDIKNYCS 505
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 66/88 (75%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E+GY ++ GRIKDMIIRGGENIYP+EIEEF+ T+P V + GVP E+ GEEV
Sbjct: 424 DLGIMDENGYLRITGRIKDMIIRGGENIYPREIEEFLYTYPQVKDVQVVGVPSEKYGEEV 483
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK ++++ +DI+ +C GK++++
Sbjct: 484 MAFIQLKAGSRVSVEDIKNYCSGKIARY 511
>gi|392562340|gb|EIW55520.1| acyl-CoA synthetase [Trametes versicolor FP-101664 SS1]
Length = 605
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 33/172 (19%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AK+VD R+VP GTPGE+L+ G+ GYW D ++T +
Sbjct: 411 VKAKIVDLEGRVVPVGTPGEILVAGYLLQKGYWGDPEQTAHVM----------------- 453
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
Q + G + D+ ++ E+GY ++VGRIKD+IIRGGEN++P
Sbjct: 454 ----------------QTDEKGTLWMHTGDEGIMDEEGYLRIVGRIKDIIIRGGENLFPV 497
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
+IE + HP++ EA VPD + GE VG I + ++ E + + +D
Sbjct: 498 QIENVLTAHPHIREAAVVSVPDPKYGEVVGAWIVREAQTAISKEETRRVVAD 549
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ ++ E+GY ++VGRIKD+IIRGGEN++P +IE + HP++ EA VPD + GE V
Sbjct: 467 DEGIMDEEGYLRIVGRIKDIIIRGGENLFPVQIENVLTAHPHIREAAVVSVPDPKYGEVV 526
Query: 458 GISIKLKENAKLNADDIR 475
G I + ++ ++ R
Sbjct: 527 GAWIVREAQTAISKEETR 544
>gi|118353812|ref|XP_001010171.1| AMP-binding enzyme family protein [Tetrahymena thermophila]
gi|89291938|gb|EAR89926.1| AMP-binding enzyme family protein [Tetrahymena thermophila SB210]
Length = 606
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 80/162 (49%), Gaps = 37/162 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D+ +IVP G GE+ IRG M YW D + T ETI + WL+TG +
Sbjct: 420 EMKLIDNEGKIVPVGEKGEICIRGFGVMQKYWGDIKATSETINEEGWLKTGDLGQVDV-- 477
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
GY ++VGRIK++IIRGGENIYPKE
Sbjct: 478 -----------------------------------RGYLKIVGRIKELIIRGGENIYPKE 502
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
IEE+++ H VL+ +PD + GEE IKLKE L +
Sbjct: 503 IEEYLRRHEKVLDVQVVAIPDVKYGEETFCLIKLKEGVTLES 544
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 56/80 (70%)
Query: 406 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
GY ++VGRIK++IIRGGENIYPKEIEE+++ H VL+ +PD + GEE IKLKE
Sbjct: 479 GYLKIVGRIKELIIRGGENIYPKEIEEYLRRHEKVLDVQVVAIPDVKYGEETFCLIKLKE 538
Query: 466 NAKLNADDIRTFCKGKVSKF 485
L + DI FC G++S +
Sbjct: 539 GVTLESKDIYHFCHGQISHY 558
>gi|333977920|ref|YP_004515865.1| long-chain-fatty-acid--CoA ligase [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821401|gb|AEG14064.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum kuznetsovii DSM
6115]
Length = 554
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E GY ++ GRIKDMIIRGGENIYP+EIEEF+ THP + + GVP + GEEV
Sbjct: 423 DLGIMDEQGYVRITGRIKDMIIRGGENIYPREIEEFLHTHPKIKDVQVVGVPSSKYGEEV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LKE A++IR FC GK++++
Sbjct: 483 MAFIQLKEGCTATAEEIREFCNGKIARY 510
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 88/182 (48%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +++ ST+ + + KVVD VP G GE+ RG+ M GY++ + T TI
Sbjct: 354 DPLEIRVSTVGRALPGVEVKVVDPATGEEVPRGYQGEICARGYNVMKGYYKMPEATASTI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ WL TG D ++ E GY ++
Sbjct: 414 DREGWLHTG-------------------------------------DLGIMDEQGYVRIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIKDMIIRGGENIYP+EIEEF+ THP + + GVP + GEEV I+LKE A
Sbjct: 437 GRIKDMIIRGGENIYPREIEEFLHTHPKIKDVQVVGVPSSKYGEEVMAFIQLKEGCTATA 496
Query: 182 YE 183
E
Sbjct: 497 EE 498
>gi|333915332|ref|YP_004489064.1| long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
gi|333745532|gb|AEF90709.1| Long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
Length = 564
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 86/179 (48%), Gaps = 40/179 (22%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P + + ST+ + KV+ + I+P G GEL RG+ M GYWED KT E I
Sbjct: 367 TPLEKRVSTIGKVLPHLELKVISPESGEILPVGAVGELCTRGYSVMRGYWEDAAKTSEAI 426
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ W+ +G D + EDGY +
Sbjct: 427 DAEGWMHSG-------------------------------------DLATIDEDGYVNIA 449
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
GRIKD++IRGGEN+YP+E+EEF+ HP + + GVPD++ GEE+ L++ A L+
Sbjct: 450 GRIKDLVIRGGENVYPREVEEFLYRHPAIQDVQVIGVPDQKYGEELCAWAILRDGATLS 508
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDGY + GRIKD++IRGGEN+YP+E+EEF+ HP + + GVPD++ GEE+
Sbjct: 436 DLATIDEDGYVNIAGRIKDLVIRGGENVYPREVEEFLYRHPAIQDVQVIGVPDQKYGEEL 495
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
L++ A L+ D +R FCKG+++ +
Sbjct: 496 CAWAILRDGATLSEDGLRAFCKGQIAHY 523
>gi|146292779|ref|YP_001183203.1| AMP-binding protein [Shewanella putrefaciens CN-32]
gi|386313458|ref|YP_006009623.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens 200]
gi|145564469|gb|ABP75404.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens CN-32]
gi|319426083|gb|ADV54157.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens 200]
Length = 570
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 80/161 (49%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D ++P PGE+ RG+C M YW D +KT TI WL +G
Sbjct: 393 EVKIIDEFGEVLPINQPGEVCSRGYCIMQCYWNDPEKTAATIDSAGWLHSG--------- 443
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + E GY Q+VGRIKDMIIRGGENIYP+E
Sbjct: 444 ----------------------------DIGQMDEQGYVQIVGRIKDMIIRGGENIYPRE 475
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + TH +V +A +GV ++ GEEV IK++ + +
Sbjct: 476 IEEKLYTHKDVQDAAVFGVQSDKYGEEVCAWIKVRSGSIIT 516
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 381 EENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
E+ DSAG + D + E GY Q+VGRIKDMIIRGGENIYP+EIEE + TH +V
Sbjct: 428 EKTAATIDSAGW-LHSGDIGQMDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDV 486
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+A +GV ++ GEEV IK++ + + DIR F K + F
Sbjct: 487 QDAAVFGVQSDKYGEEVCAWIKVRSGSIITEADIRHFLTEKFAYF 531
>gi|213964984|ref|ZP_03393183.1| acyl-CoA synthetase family member 2 [Corynebacterium amycolatum
SK46]
gi|213952520|gb|EEB63903.1| acyl-CoA synthetase family member 2 [Corynebacterium amycolatum
SK46]
Length = 584
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 82/162 (50%), Gaps = 37/162 (22%)
Query: 23 VVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAM 82
+ + +P G GE+++RG+ M YWE +KT E I D W+ TG
Sbjct: 412 ICEETGETLPRGEQGEVVVRGYSVMKEYWEHPEKTAEAIDADGWMHTG------------ 459
Query: 83 AIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEE 142
D VL ++GY + GRIKDM+IRGGENIYP+EIEE
Sbjct: 460 -------------------------DLGVLDDEGYLSITGRIKDMLIRGGENIYPREIEE 494
Query: 143 FIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
F+ THP V++A GVPD++ GEE+ + L ++ + ED
Sbjct: 495 FLFTHPAVVDAQVIGVPDDKYGEEIMAWVILHDDVEDLTAED 536
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 20/256 (7%)
Query: 236 RALYSLKMSSL--LPHNFSAEVEAHYNQKSDIDWEYADKCEKSMQGWAKTLSSEYNSYAG 293
+A++S K +SL +P F E+E ++Q+ EY + SM AG
Sbjct: 305 KAVHSAKATSLYGVPTMFINELEEAHDQE-----EYGSPYDLSML--------RTGVMAG 351
Query: 294 PVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITPALKGLYHFKKWM-NPKFST 352
+ + D ++ + R + Y E + +P K + + M + +
Sbjct: 352 TSCPSKTMRDVMDKLNMREIAICYGMTETSPVSFQTRADSPLEKRVNTVGQIMPHLEARI 411
Query: 353 TTRKVALTWPNSMDSEARIYHY---KKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQ 409
+ T P E + Y K+Y E A + D VL ++GY
Sbjct: 412 ICEETGETLPRGEQGEVVVRGYSVMKEYWEHPEKTAEAIDADGWMHTGDLGVLDDEGYLS 471
Query: 410 VVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK- 468
+ GRIKDM+IRGGENIYP+EIEEF+ THP V++A GVPD++ GEE+ + L ++ +
Sbjct: 472 ITGRIKDMLIRGGENIYPREIEEFLFTHPAVVDAQVIGVPDDKYGEEIMAWVILHDDVED 531
Query: 469 LNADDIRTFCKGKVSK 484
L A+D+ F GK+S+
Sbjct: 532 LTAEDVAAFAHGKLSR 547
>gi|392555397|ref|ZP_10302534.1| AMP-binding domain protein [Pseudoalteromonas undina NCIMB 2128]
Length = 577
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 80/161 (49%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D + G PGE+ RG M YW DE+KTK TI WL +G
Sbjct: 400 EVKIIDEVGEVQKIGQPGEVCSRGAGIMRCYWNDEEKTKATIDNQGWLHSG--------- 450
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ +G+ +VGRIKDMIIRGGENIYP+E
Sbjct: 451 ----------------------------DLGVMDSEGFVSIVGRIKDMIIRGGENIYPRE 482
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + T+P + +A +G+ DE+ GEEV I+ KE L+
Sbjct: 483 IEEVLYTYPGIQDAAIFGITDEKFGEEVCAWIQPKEGEVLD 523
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +G+ +VGRIKDMIIRGGENIYP+EIEE + T+P + +A +G+ DE+ GEEV
Sbjct: 451 DLGVMDSEGFVSIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGITDEKFGEEV 510
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+ KE L+ IR F K K++ F
Sbjct: 511 CAWIQPKEGEVLDEQAIRLFLKDKLAYF 538
>gi|392534955|ref|ZP_10282092.1| AMP-binding domain protein [Pseudoalteromonas arctica A 37-1-2]
Length = 577
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 81/161 (50%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K++D I G PGE+ +G M YW D+ KTK TI WL +G
Sbjct: 400 EVKIIDELGNIQQIGQPGEVCSKGAGIMRCYWNDDAKTKATIDESGWLHSG--------- 450
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ +G+ +VGRIKDMIIRGGENIYP+E
Sbjct: 451 ----------------------------DLGVMDTEGFVTIVGRIKDMIIRGGENIYPRE 482
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + T+P + +A +G+ DER GEEV I+ KE+A L+
Sbjct: 483 IEEVLYTYPGIQDAAIFGITDERYGEEVCAWIQPKEDAVLD 523
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +G+ +VGRIKDMIIRGGENIYP+EIEE + T+P + +A +G+ DER GEEV
Sbjct: 451 DLGVMDTEGFVTIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGITDERYGEEV 510
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+ KE+A L+ IR F K K++ F
Sbjct: 511 CAWIQPKEDAVLDEQAIREFLKDKLAYF 538
>gi|256392289|ref|YP_003113853.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
gi|256358515|gb|ACU72012.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
Length = 550
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 76/143 (53%), Gaps = 37/143 (25%)
Query: 36 PGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQ 95
PGEL RG+ MLGYW++ Q+T E + D W+ TG
Sbjct: 391 PGELCTRGYSVMLGYWDEPQRTAEAVDGDGWMHTG------------------------- 425
Query: 96 QQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYA 155
D + DGY +VGRIKDM+IRGGEN+YP+E+EEF+ +HP+V +
Sbjct: 426 ------------DLAQMDADGYVAIVGRIKDMVIRGGENVYPREVEEFLYSHPDVEDVQV 473
Query: 156 YGVPDERMGEEVGISIKLKENAK 178
GVPD++ GEE+ ++L+ A+
Sbjct: 474 IGVPDQKYGEELMAWVRLRPGAQ 496
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY +VGRIKDM+IRGGEN+YP+E+EEF+ +HP+V + GVPD++ GEE+ ++L+
Sbjct: 433 DGYVAIVGRIKDMVIRGGENVYPREVEEFLYSHPDVEDVQVIGVPDQKYGEELMAWVRLR 492
Query: 465 ENAK-LNADDIRTFCKGKVSKF 485
A+ L + +RTFC+G+++ +
Sbjct: 493 PGAQPLTPEAVRTFCEGRLAHY 514
>gi|209514969|ref|ZP_03263838.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
gi|209504595|gb|EEA04582.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
Length = 564
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 88/186 (47%), Gaps = 39/186 (20%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P + + ST+ + K+VD R V G GELL RG+ M GYW D +KT E I
Sbjct: 367 DPPEYRVSTVGRVQPHLEVKIVDEWGRTVLRGAMGELLTRGYSVMCGYWNDPEKTSEAID 426
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
+ W+ TG D + EDGY ++VG
Sbjct: 427 QEGWMHTG-------------------------------------DLATIDEDGYCRIVG 449
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R KD+IIRGGENI P+++EEF+ + + + GVPD + GEE+ I L+ A +A
Sbjct: 450 RSKDLIIRGGENICPRDVEEFLYRYSKIQDVQCVGVPDPKYGEELCACIILRPGAAADAE 509
Query: 183 EDKSIS 188
E +S
Sbjct: 510 EIRSFC 515
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDGY ++VGR KD+IIRGGENI P+++EEF+ + + + GVPD + GEE+
Sbjct: 435 DLATIDEDGYCRIVGRSKDLIIRGGENICPRDVEEFLYRYSKIQDVQCVGVPDPKYGEEL 494
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L+ A +A++IR+FC+G+++ +
Sbjct: 495 CACIILRPGAAADAEEIRSFCRGRIAHY 522
>gi|39933541|ref|NP_945817.1| long-chain fatty acid CoA ligase (AMP-binding) [Rhodopseudomonas
palustris CGA009]
gi|39647387|emb|CAE25908.1| putative long-chain fatty-acid-CoA ligase [Rhodopseudomonas
palustris CGA009]
Length = 541
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 19 FQAKVVDHN-NRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ ++VD N +R+V G GE+ +RG+ MLGY+ ++T ETI D WLRTG
Sbjct: 363 VEVRIVDPNGDRVVVIGVEGEIQVRGYQTMLGYFNAPKETSETITADGWLRTG------- 415
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + E GY ++ GR+KDMIIRGGENIYP
Sbjct: 416 ------------------------------DLGAMDEAGYLRITGRLKDMIIRGGENIYP 445
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
E+E + HP V + +G PD++ GE V +++L + + A E
Sbjct: 446 AEVEACLLRHPAVADISVFGAPDDKWGEVVAAAVRLVPDVPVTATE 491
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY ++ GR+KDMIIRGGENIYP E+E + HP V + +G PD++ GE V
Sbjct: 416 DLGAMDEAGYLRITGRLKDMIIRGGENIYPAEVEACLLRHPAVADISVFGAPDDKWGEVV 475
Query: 458 GISIKLKENAKLNADDIRTFCKGKVS 483
+++L + + A ++ FCK +++
Sbjct: 476 AAAVRLVPDVPVTATELSAFCKTEIA 501
>gi|375107842|ref|ZP_09754103.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Burkholderiales bacterium JOSHI_001]
gi|374668573|gb|EHR73358.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Burkholderiales bacterium JOSHI_001]
Length = 562
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 86/188 (45%), Gaps = 40/188 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + +T+ + KVVD + R VP G GEL +G+ M GYW + ++T E +
Sbjct: 367 DPLDKRVATVGRVLPHLEVKVVDVDGRTVPVGDKGELCTKGYSVMQGYWGEPERTAEAV- 425
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ TG D + GY +VG
Sbjct: 426 RGGWMHTG-------------------------------------DLATIDAQGYCNIVG 448
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
R+KDM+IRGGEN+YP+E+EEF+ HP V +GVPD R GEE+ I K A
Sbjct: 449 RVKDMVIRGGENVYPREVEEFLFRHPKVAAVQVFGVPDARYGEELCAWIITKPGAACTED 508
Query: 183 EDKSISSD 190
E ++ D
Sbjct: 509 ELRAFCRD 516
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + GY +VGR+KDM+IRGGEN+YP+E+EEF+ HP V +GVPD R GEE+
Sbjct: 434 DLATIDAQGYCNIVGRVKDMVIRGGENVYPREVEEFLFRHPKVAAVQVFGVPDARYGEEL 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I K A D++R FC+ +++ +
Sbjct: 494 CAWIITKPGAACTEDELRAFCRDQIAHY 521
>gi|114563672|ref|YP_751185.1| AMP-binding protein [Shewanella frigidimarina NCIMB 400]
gi|114334965|gb|ABI72347.1| AMP-dependent synthetase and ligase [Shewanella frigidimarina NCIMB
400]
Length = 568
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 80/161 (49%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+++ +V G PGE+ RG+C M YW D KT TI WL +G +
Sbjct: 392 EVKIINEFGDVVAIGQPGEVCSRGYCIMQSYWNDAVKTAATIDSAGWLHSGDIGQ----- 446
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
+ E GY Q+VGRIKDMIIRGGENIYP+E
Sbjct: 447 --------------------------------MDELGYVQIVGRIKDMIIRGGENIYPRE 474
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + +H +V +A +GV ++ GEEV IK++ NA +
Sbjct: 475 IEEKLYSHKDVQDAAVFGVQSDKYGEEVCAWIKVRANADIT 515
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 388 DSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYG 447
DSAG + D + E GY Q+VGRIKDMIIRGGENIYP+EIEE + +H +V +A +G
Sbjct: 434 DSAGW-LHSGDIGQMDELGYVQIVGRIKDMIIRGGENIYPREIEEKLYSHKDVQDAAVFG 492
Query: 448 VPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
V ++ GEEV IK++ NA + DDIR F K + F
Sbjct: 493 VQSDKYGEEVCAWIKVRANADITEDDIRHFLTEKFAYF 530
>gi|448747756|ref|ZP_21729411.1| AMP-dependent synthetase/ligase [Halomonas titanicae BH1]
gi|445564699|gb|ELY20816.1| AMP-dependent synthetase/ligase [Halomonas titanicae BH1]
Length = 558
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 93/186 (50%), Gaps = 44/186 (23%)
Query: 5 NPTD-LQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
NPTD +Q T+ + KVVD + V G PGEL ++G M GYW+ E +T++ I
Sbjct: 370 NPTDSIQLGTIGKPVAGTAVKVVDADGNDVALGEPGELCVQGPQVMKGYWQREDETRDAI 429
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W RTG D VL++DGY ++V
Sbjct: 430 DEDGWFRTG-------------------------------------DIAVLQDDGYIRIV 452
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
R KDMI+ G N+YP E+E+ + HP+VLE+ A GVPDE GE +IKL +K +
Sbjct: 453 DRKKDMILVSGFNVYPNEVEDVVAAHPDVLESAAVGVPDENAGE----AIKLFVVSKNDQ 508
Query: 182 YEDKSI 187
++K++
Sbjct: 509 LDEKTL 514
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D VL++DGY ++V R KDMI+ G N+YP E+E+ + HP+VLE+ A GVPDE GE +
Sbjct: 439 DIAVLQDDGYIRIVDRKKDMILVSGFNVYPNEVEDVVAAHPDVLESAAVGVPDENAGEAI 498
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ + + +N +L+ +R +CK +++ +
Sbjct: 499 KLFV-VSKNDQLDEKTLRDWCKKELTGY 525
>gi|39996205|ref|NP_952156.1| AMP-binding protein [Geobacter sulfurreducens PCA]
gi|409911646|ref|YP_006890111.1| acyl-CoA synthetase, AMP-forming [Geobacter sulfurreducens KN400]
gi|39982970|gb|AAR34429.1| acyl-CoA synthetase, AMP-forming [Geobacter sulfurreducens PCA]
gi|307634802|gb|ADI83940.2| acyl-CoA synthetase, AMP-forming [Geobacter sulfurreducens KN400]
Length = 552
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 386 VPDSAGRSI------FEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
+P+ R+I D V+ E+GY ++ GRIK+MIIRGGENIYP+EIEEF+ THP
Sbjct: 405 MPEETARAIDADGWLHTGDLAVMDENGYCKITGRIKNMIIRGGENIYPREIEEFLYTHPK 464
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ + YGVPD + GE+V ++ LK+ + +D+R FC+GK++ +
Sbjct: 465 ISDVQIYGVPDRKYGEQVMAAVILKKGDTMTEEDVRDFCRGKIANY 510
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 40/172 (23%)
Query: 8 DLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPD 64
+L+ +T+ + + K+VD +P G GEL RG+ M GY++ ++T I D
Sbjct: 357 ELRVATVGRALPDVEVKIVDIETGAELPPGKQGELCTRGYLVMKGYYKMPEETARAIDAD 416
Query: 65 RWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRI 124
WL TG D V+ E+GY ++ GRI
Sbjct: 417 GWLHTG-------------------------------------DLAVMDENGYCKITGRI 439
Query: 125 KDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
K+MIIRGGENIYP+EIEEF+ THP + + YGVPD + GE+V ++ LK+
Sbjct: 440 KNMIIRGGENIYPREIEEFLYTHPKISDVQIYGVPDRKYGEQVMAAVILKKG 491
>gi|357039287|ref|ZP_09101081.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355358186|gb|EHG05954.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 547
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 92/188 (48%), Gaps = 40/188 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ S++ + + + KVVD + R VP G GEL RG+ M GY+ + T+ I
Sbjct: 356 DPIELRVSSVGRALPNVEVKVVDPDTGREVPPGIQGELCTRGYHVMKGYYNMPEATESAI 415
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D ++ E+GY ++
Sbjct: 416 DKDNWLHTG-------------------------------------DLAIMDENGYCKIT 438
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ TH V + GVP ++ GEEV I+LK+
Sbjct: 439 GRLKDMIIRGGENIYPREIEEFLYTHTKVRDVQIVGVPSQKYGEEVAAFIQLKDGTSATV 498
Query: 182 YEDKSISS 189
E K +
Sbjct: 499 EEFKEFCT 506
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E+GY ++ GR+KDMIIRGGENIYP+EIEEF+ TH V + GVP ++ GEEV
Sbjct: 425 DLAIMDENGYCKITGRLKDMIIRGGENIYPREIEEFLYTHTKVRDVQIVGVPSQKYGEEV 484
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ ++ + FC GK+S+F
Sbjct: 485 AAFIQLKDGTSATVEEFKEFCTGKISRF 512
>gi|333369906|ref|ZP_08461993.1| AMP-binding domain protein [Psychrobacter sp. 1501(2011)]
gi|332969073|gb|EGK08112.1| AMP-binding domain protein [Psychrobacter sp. 1501(2011)]
Length = 599
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 89/189 (47%), Gaps = 41/189 (21%)
Query: 5 NPTDLQFST--LSSSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P D Q ST L + + K+VD +VP G GELL RG+ M GYW KT+E+I
Sbjct: 409 TPLDKQVSTVGLVQPNLEVKIVDTETGEVVPIGETGELLTRGYSVMKGYWGSRFKTRESI 468
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ TG D + E+GY +VV
Sbjct: 469 -KDGWMHTG-------------------------------------DLATMDEEGYIKVV 490
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR KDM+IRGGENIYP EIE ++ HP + + GVPD++ GE + I K+N +L
Sbjct: 491 GRSKDMVIRGGENIYPVEIENYLYRHPKISDVQIVGVPDQKYGEVLAAWIIAKQNVELTE 550
Query: 182 YEDKSISSD 190
E K +
Sbjct: 551 EEVKQFCKE 559
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY +VVGR KDM+IRGGENIYP EIE ++ HP + + GVPD++ GE +
Sbjct: 477 DLATMDEEGYIKVVGRSKDMVIRGGENIYPVEIENYLYRHPKISDVQIVGVPDQKYGEVL 536
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I K+N +L ++++ FCK ++ +
Sbjct: 537 AAWIIAKQNVELTEEEVKQFCKENIAHY 564
>gi|126179036|ref|YP_001047001.1| AMP-dependent synthetase/ligase [Methanoculleus marisnigri JR1]
gi|125861830|gb|ABN57019.1| AMP-dependent synthetase and ligase [Methanoculleus marisnigri JR1]
Length = 566
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 88/184 (47%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + + ST+ + K++D N RIVP G GE+ RG+C M Y+ + T+ TI
Sbjct: 366 DPLERRVSTIGKPFPHTEIKIIDPNTQRIVPRGETGEICARGYCVMRCYYNNPNATRATI 425
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
W TG D + E+ Y ++V
Sbjct: 426 DESHWNHTG-------------------------------------DLGTMDEEDYVKIV 448
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDM+IRGGENIYP+EIEE++ HP V +AY GVPD + GEE+ IK A L
Sbjct: 449 GRLKDMVIRGGENIYPREIEEYLHNHPKVADAYVIGVPDRKYGEELMAWIKTDNGATLTE 508
Query: 182 YEDK 185
E K
Sbjct: 509 DEVK 512
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+ Y ++VGR+KDM+IRGGENIYP+EIEE++ HP V +AY GVPD + GEE+
Sbjct: 435 DLGTMDEEDYVKIVGRLKDMVIRGGENIYPREIEEYLHNHPKVADAYVIGVPDRKYGEEL 494
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK A L D+++ FC+G+++ F
Sbjct: 495 MAWIKTDNGATLTEDEVKEFCRGRIAHF 522
>gi|340515846|gb|EGR46098.1| predicted protein [Trichoderma reesei QM6a]
Length = 582
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 80/163 (49%), Gaps = 41/163 (25%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR----WLRTGRYKKT 75
QAK+VD + IVP GT GEL + G+ GYW + +KT E + D WL TG
Sbjct: 391 QAKIVDRDGNIVPIGTRGELCMAGYQLQAGYWNNSEKTNEVMVRDAAGVLWLHTG----- 445
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
D+ V EDGY + GR KD+IIRGGENI
Sbjct: 446 --------------------------------DEAVFDEDGYCTITGRFKDIIIRGGENI 473
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
YP EIEE + HP++ A G+ ++ GE VG ++L +NAK
Sbjct: 474 YPLEIEERLMAHPSISRAIVVGLKNKHYGEVVGAFVELADNAK 516
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 384 ITVPDSAGRS-IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 442
+ V D+AG + D+ V EDGY + GR KD+IIRGGENIYP EIEE + HP++
Sbjct: 431 VMVRDAAGVLWLHTGDEAVFDEDGYCTITGRFKDIIIRGGENIYPLEIEERLMAHPSISR 490
Query: 443 AYAYGVPDERMGEEVGISIKLKENAKLNAD 472
A G+ ++ GE VG ++L +NAK +D
Sbjct: 491 AIVVGLKNKHYGEVVGAFVELADNAKKLSD 520
>gi|170585217|ref|XP_001897382.1| AMP-binding enzyme family protein [Brugia malayi]
gi|158595208|gb|EDP33778.1| AMP-binding enzyme family protein [Brugia malayi]
Length = 631
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 82/159 (51%), Gaps = 37/159 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++ VVD I+P G GE+L+RG+ M YW +E++TKE I DRW TG
Sbjct: 425 LESAVVDSEGIILPRGERGEVLVRGYSVMKYYWNNERQTKEEITADRWYHTG-------- 476
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E+G +VGR KDMI+RGGENIYP
Sbjct: 477 -----------------------------DIGVIHENGSLSIVGRKKDMIVRGGENIYPL 507
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
EIE+++ HP + + GVPDER GE V I+L+++A
Sbjct: 508 EIEQYLFRHPKIEDVQVVGVPDERYGEVVCAWIRLRDSA 546
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 372 YHYKKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIE 431
Y++ + +E IT A R D V+ E+G +VGR KDMI+RGGENIYP EIE
Sbjct: 455 YYWNNERQTKEEIT----ADRWYHTGDIGVIHENGSLSIVGRKKDMIVRGGENIYPLEIE 510
Query: 432 EFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA-KLNADDIRTFCKGKVSKF 485
+++ HP + + GVPDER GE V I+L+++A + +DIR FCKG+++ F
Sbjct: 511 QYLFRHPKIEDVQVVGVPDERYGEVVCAWIRLRDSAGDITEEDIRDFCKGRIAHF 565
>gi|374619695|ref|ZP_09692229.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [gamma
proteobacterium HIMB55]
gi|374302922|gb|EHQ57106.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [gamma
proteobacterium HIMB55]
Length = 569
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 86/166 (51%), Gaps = 38/166 (22%)
Query: 16 SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKT 75
+ +F KVVD + + +P G GE+ ++G + GY + T +TI D WL TG
Sbjct: 392 APTFDGKVVDKSGKELPVGELGEICVKGAAVIKGYLNRPEATADTI-VDGWLHTG----- 445
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
+G+F E+G+ +V R KDMI+RGGENI
Sbjct: 446 ----------------------DLGYF----------DEEGFLYLVDRAKDMILRGGENI 473
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
Y E+E + HP VLE A+ VPDER+GEEVG++I LK+ A L+A
Sbjct: 474 YGAEVEFAVFDHPAVLECVAFAVPDERLGEEVGVAIHLKDGAMLDA 519
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 57/82 (69%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
E+G+ +V R KDMI+RGGENIY E+E + HP VLE A+ VPDER+GEEVG++I L
Sbjct: 452 EEGFLYLVDRAKDMILRGGENIYGAEVEFAVFDHPAVLECVAFAVPDERLGEEVGVAIHL 511
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
K+ A L+A +R +++ F
Sbjct: 512 KDGAMLDASGLREHLSTRLAAF 533
>gi|424922517|ref|ZP_18345878.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
fluorescens R124]
gi|404303677|gb|EJZ57639.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
fluorescens R124]
Length = 565
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 81/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D +VP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNSQATAEAIDEAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVNIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNDEGYVNIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK + +++ +CK +++ F
Sbjct: 500 VAWIKFHPGHNASELELQAWCKERIAHF 527
>gi|170722114|ref|YP_001749802.1| acyl-CoA synthetase [Pseudomonas putida W619]
gi|169760117|gb|ACA73433.1| AMP-dependent synthetase and ligase [Pseudomonas putida W619]
Length = 557
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 82/165 (49%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++KV+D + VP G GEL RG+ MLGYW + + T E+I + W+ TG
Sbjct: 382 LESKVIDADGNTVPRGDIGELCTRGYNVMLGYWNNPEATAESIDGEGWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E GY ++VGR KDMIIRGGENIYP+
Sbjct: 434 -----------------------------DLAVMDEQGYVRIVGRSKDMIIRGGENIYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
E+EEF THP V + GVP + GEE+ ++L ++ + E
Sbjct: 465 ELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRLHPGHQVASDE 509
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V + GVP + GEE+
Sbjct: 434 DLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++L ++ +D++R + + +++ F
Sbjct: 494 VAWVRLHPGHQVASDELREWARARIAHF 521
>gi|407980554|ref|ZP_11161337.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. HYC-10]
gi|407412687|gb|EKF34460.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. HYC-10]
Length = 544
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 77/150 (51%), Gaps = 37/150 (24%)
Query: 31 VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKP 90
VP G GEL RG+ M GY+++E+ T E I D WL TG
Sbjct: 382 VPRGEQGELCTRGYHVMKGYYKNEEATNEVIDEDGWLHTG-------------------- 421
Query: 91 LQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 150
D + +DGY ++ GR+KDMIIRGGEN+YPKEIE+ + THP +
Sbjct: 422 -----------------DLAEMDQDGYVKITGRLKDMIIRGGENVYPKEIEDVLYTHPAI 464
Query: 151 LEAYAYGVPDERMGEEVGISIKLKENAKLN 180
L+A G+PDE GEE I+LK+ ++
Sbjct: 465 LDAQVVGIPDETYGEEAAAFIRLKQGQTVS 494
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 3/119 (2%)
Query: 369 ARIYHYKK--YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIY 426
R YH K Y EE V D G + D + +DGY ++ GR+KDMIIRGGEN+Y
Sbjct: 392 TRGYHVMKGYYKNEEATNEVIDEDGW-LHTGDLAEMDQDGYVKITGRLKDMIIRGGENVY 450
Query: 427 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
PKEIE+ + THP +L+A G+PDE GEE I+LK+ ++ D + ++C+ +++++
Sbjct: 451 PKEIEDVLYTHPAILDAQVVGIPDETYGEEAAAFIRLKQGQTVSIDKLTSYCQSQMARY 509
>gi|393220000|gb|EJD05486.1| acetyl-CoA synthetase-like protein [Fomitiporia mediterranea
MF3/22]
Length = 636
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 89/187 (47%), Gaps = 45/187 (24%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D + T+ +AK++D ++VP GTPGE+ + G+ GYW DE +TK +
Sbjct: 427 DPLDKRVETVGRIQPHVKAKIIDTEGKVVPVGTPGEICVAGYLVQKGYWGDEDQTKAAVK 486
Query: 63 PDR------WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDG 116
W+ +G D V+ E+G
Sbjct: 487 THSDDPHTLWMHSG-------------------------------------DIGVMDEEG 509
Query: 117 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
Y +VVGRIKD+IIRGGEN++P IE + HP + EA A VPD + GE VG I L +N
Sbjct: 510 YLRVVGRIKDVIIRGGENLFPVVIENRVSLHPKISEAAAVAVPDPKYGEVVGAWITLADN 569
Query: 177 AKLNAYE 183
A L+ E
Sbjct: 570 ASLSREE 576
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 54/78 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY +VVGRIKD+IIRGGEN++P IE + HP + EA A VPD + GE V
Sbjct: 501 DIGVMDEEGYLRVVGRIKDVIIRGGENLFPVVIENRVSLHPKISEAAAVAVPDPKYGEVV 560
Query: 458 GISIKLKENAKLNADDIR 475
G I L +NA L+ ++IR
Sbjct: 561 GAWITLADNASLSREEIR 578
>gi|126174820|ref|YP_001050969.1| AMP-binding protein [Shewanella baltica OS155]
gi|386341573|ref|YP_006037939.1| long-chain-fatty-acid--CoA ligase [Shewanella baltica OS117]
gi|125998025|gb|ABN62100.1| AMP-dependent synthetase and ligase [Shewanella baltica OS155]
gi|334863974|gb|AEH14445.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS117]
Length = 570
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 79/161 (49%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+VD ++P GE+ RG+C M YW D +KT TI WL +G
Sbjct: 393 EVKIVDEFGEVLPINQAGEVCSRGYCIMQCYWNDPEKTAATIDSAGWLHSG--------- 443
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + E GY Q+VGRIKDMIIRGGENIYP+E
Sbjct: 444 ----------------------------DIGQMDEQGYVQIVGRIKDMIIRGGENIYPRE 475
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IEE + TH +V +A +GV ++ GEEV IK++ A +
Sbjct: 476 IEEKLYTHKDVQDAAVFGVQSDKYGEEVCAWIKVRSGATIT 516
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 381 EENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
E+ DSAG + D + E GY Q+VGRIKDMIIRGGENIYP+EIEE + TH +V
Sbjct: 428 EKTAATIDSAGW-LHSGDIGQMDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDV 486
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+A +GV ++ GEEV IK++ A + +DIR F K + F
Sbjct: 487 QDAAVFGVQSDKYGEEVCAWIKVRSGATITEEDIRHFLTEKFAYF 531
>gi|221069244|ref|ZP_03545349.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
gi|220714267|gb|EED69635.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
Length = 587
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 80/163 (49%), Gaps = 38/163 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD I+ G GEL RG+ M GYW+DE +T+E I ++W+ TG
Sbjct: 406 LEVKIVDPSTGEIMAPGQSGELCTRGYSVMHGYWDDEARTREAIDAEQWMHTG------- 458
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + +GY +VGRIKDM+IRGGENIYP
Sbjct: 459 ------------------------------DLATMDAEGYVNIVGRIKDMVIRGGENIYP 488
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
+EIEEF+ HP V + GVPD R GEE+ + +K +L
Sbjct: 489 REIEEFLYRHPKVQDVQVVGVPDVRYGEELCAWVIVKPGLELG 531
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGRIKDM+IRGGENIYP+EIEEF+ HP V + GVPD R GEE+
Sbjct: 459 DLATMDAEGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPKVQDVQVVGVPDVRYGEEL 518
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ +K +L D++R FCKG+++ +
Sbjct: 519 CAWVIVKPGLELGEDEVRDFCKGQIAHY 546
>gi|104782040|ref|YP_608538.1| acyl-CoA synthetase [Pseudomonas entomophila L48]
gi|95111027|emb|CAK15747.1| long-chain-fatty-acid-CoA ligase [Pseudomonas entomophila L48]
Length = 556
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 37/155 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ KV+D +P G GEL RG+ M+GYW + + T E+I D W+ TG
Sbjct: 382 LETKVIDSEGATLPRGEVGELCTRGYSVMIGYWNNPKATAESIDSDGWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E GY ++VGR KDMIIRGGENIYP+
Sbjct: 434 -----------------------------DLAVMDEQGYVRIVGRSKDMIIRGGENIYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
E+EEF THP V + GVP + GEE+ ++L
Sbjct: 465 ELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRL 499
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V + GVP + GEE+
Sbjct: 434 DLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++L + D++R + K +++ F
Sbjct: 494 VAWVRLHPGHAASEDELREWAKARIAHF 521
>gi|421075462|ref|ZP_15536475.1| AMP-dependent synthetase and ligase [Pelosinus fermentans JBW45]
gi|392526460|gb|EIW49573.1| AMP-dependent synthetase and ligase [Pelosinus fermentans JBW45]
Length = 546
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 91/184 (49%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ +T+ + + + K++D + VP T GEL RG+ M GY++ + T I
Sbjct: 354 DPLELRVTTVGRALPNVEVKIIDSETGKEVPRNTQGELCSRGYNTMKGYYKMIEATAAAI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D V+ E+GY ++
Sbjct: 414 DNDGWLHTG-------------------------------------DLAVMDENGYCKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEFI THP V + GVP E+ GEEV I++K +
Sbjct: 437 GRLKDMIIRGGENIYPREIEEFIYTHPKVKDVQVVGVPSEKYGEEVMAFIQIKPGNSITE 496
Query: 182 YEDK 185
E K
Sbjct: 497 EELK 500
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY ++ GR+KDMIIRGGENIYP+EIEEFI THP V + GVP E+ GEEV
Sbjct: 423 DLAVMDENGYCKITGRLKDMIIRGGENIYPREIEEFIYTHPKVKDVQVVGVPSEKYGEEV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I++K + ++++ +C+ K++++
Sbjct: 483 MAFIQIKPGNSITEEELKEYCREKIARY 510
>gi|340500544|gb|EGR27412.1| hypothetical protein IMG5_195940 [Ichthyophthirius multifiliis]
Length = 496
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 85/165 (51%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++K+++ +IVP G GE+ IRG+ M YW+D +KT ETI + W++TG K
Sbjct: 309 LESKLINKKGKIVPRGEIGEIYIRGYSVMQKYWDDIKKTNETIDINSWIKTGDLGK---- 364
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
+ E GY Q+VGR KD+IIRGGENIYPK
Sbjct: 365 ---------------------------------MDERGYMQIVGRSKDIIIRGGENIYPK 391
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
EIEE+++ P +++ G+P+++ GEE+ I L N + E
Sbjct: 392 EIEEYLRKIPKIMDVQIVGIPNKKYGEEIFCLIILNPNVYFDKQE 436
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 56/84 (66%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ E GY Q+VGR KD+IIRGGENIYPKEIEE+++ P +++ G+P+++ GEE+ I
Sbjct: 365 MDERGYMQIVGRSKDIIIRGGENIYPKEIEEYLRKIPKIMDVQIVGIPNKKYGEEIFCLI 424
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
L N + ++ FC K++ F
Sbjct: 425 ILNPNVYFDKQEVYEFCNRKIAYF 448
>gi|425900342|ref|ZP_18876933.1| long-chain-fatty-acid--CoA ligase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397889460|gb|EJL05942.1| long-chain-fatty-acid--CoA ligase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 564
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 80/168 (47%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D IVP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNIVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + E GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLATMNEQGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P + GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSKYGEEIVAWIKF 505
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P + GEE+
Sbjct: 440 DLATMNEQGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSKYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK + ++++ +CK +++ F
Sbjct: 500 VAWIKFHPGHSASEEELQAWCKARIAHF 527
>gi|194014794|ref|ZP_03053411.1| long-chain-fatty-acid--CoA ligase [Bacillus pumilus ATCC 7061]
gi|194013820|gb|EDW23385.1| long-chain-fatty-acid--CoA ligase [Bacillus pumilus ATCC 7061]
Length = 545
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 74/146 (50%), Gaps = 37/146 (25%)
Query: 31 VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKP 90
VP G GEL RG+ M GY+++E+ T E I D WL TG
Sbjct: 383 VPRGEQGELCTRGYHVMKGYYKNEEATNEVIDEDGWLHTG-------------------- 422
Query: 91 LQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 150
D + EDGY + GR+KDMIIRGGEN+YPKEIE+ + THP +
Sbjct: 423 -----------------DLAEMDEDGYVIITGRLKDMIIRGGENVYPKEIEDVLYTHPAI 465
Query: 151 LEAYAYGVPDERMGEEVGISIKLKEN 176
L+A G+PDE GEE I+LK+
Sbjct: 466 LDAQVVGIPDETYGEEAAAFIRLKQG 491
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 369 ARIYHYKK--YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIY 426
R YH K Y EE V D G + D + EDGY + GR+KDMIIRGGEN+Y
Sbjct: 393 TRGYHVMKGYYKNEEATNEVIDEDGW-LHTGDLAEMDEDGYVIITGRLKDMIIRGGENVY 451
Query: 427 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
PKEIE+ + THP +L+A G+PDE GEE I+LK+ + + + ++C+ +++++
Sbjct: 452 PKEIEDVLYTHPAILDAQVVGIPDETYGEEAAAFIRLKQGHAVTIETLTSYCQSQMARY 510
>gi|432331437|ref|YP_007249580.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Methanoregula
formicicum SMSP]
gi|432138146|gb|AGB03073.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Methanoregula
formicicum SMSP]
Length = 566
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 90/184 (48%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P D + +T+ + + K++D N +IVP G GE+ RG+C M Y+ + T T+
Sbjct: 366 DPLDRRVTTVGRAFPHTELKIIDPNTGKIVPTGAIGEICARGYCVMKCYYNNPAATHATL 425
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
DRW TG D + ++GY ++V
Sbjct: 426 DKDRWNHTG-------------------------------------DLGTMDDEGYFKIV 448
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDM+IRGGENIYP+EIEEF+ H + + Y GVPD + GEE+ +KLK +
Sbjct: 449 GRLKDMVIRGGENIYPREIEEFLHHHEKISDVYITGVPDVKYGEELCAWVKLKPGVTMTE 508
Query: 182 YEDK 185
E K
Sbjct: 509 QEVK 512
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY ++VGR+KDM+IRGGENIYP+EIEEF+ H + + Y GVPD + GEE+
Sbjct: 435 DLGTMDDEGYFKIVGRLKDMVIRGGENIYPREIEEFLHHHEKISDVYITGVPDVKYGEEL 494
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+KLK + +++ +CKGK++++
Sbjct: 495 CAWVKLKPGVTMTEQEVKDYCKGKIARY 522
>gi|431802842|ref|YP_007229745.1| acyl-CoA synthetase [Pseudomonas putida HB3267]
gi|430793607|gb|AGA73802.1| acyl-CoA synthetase [Pseudomonas putida HB3267]
Length = 557
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 80/165 (48%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ KV+D + +P G GEL RG+ MLGYW + + T E+I + W+ TG
Sbjct: 382 LENKVIDADGNTLPRGEIGELCTRGYSVMLGYWNNPKATAESIDEEGWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E GY ++VGR KDMIIRGGENIYP+
Sbjct: 434 -----------------------------DLAVMDEQGYVRIVGRSKDMIIRGGENIYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
E+EEF THP V + GVP + GEE+ ++L +A E
Sbjct: 465 ELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRLHPGHTASAEE 509
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 387 PDSAGRSIFEK------DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
P + SI E+ D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V
Sbjct: 417 PKATAESIDEEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAV 476
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ GVP + GEE+ ++L +A+++R + K +++ F
Sbjct: 477 ADVQVIGVPCSKYGEEIVAWVRLHPGHTASAEELRDWAKARIAHF 521
>gi|389681151|ref|ZP_10172496.1| putative long-chain-fatty-acid--CoA ligase [Pseudomonas
chlororaphis O6]
gi|388554687|gb|EIM17935.1| putative long-chain-fatty-acid--CoA ligase [Pseudomonas
chlororaphis O6]
Length = 564
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 80/168 (47%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D IVP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNIVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + E GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLATMNEQGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P + GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSKYGEEIVAWIKF 505
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P + GEE+
Sbjct: 440 DLATMNEQGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSKYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK + ++++ +CK +++ F
Sbjct: 500 VAWIKFHPGHTASEEELQAWCKERIAHF 527
>gi|441661312|ref|XP_004091499.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Nomascus leucogenys]
Length = 262
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 76/139 (54%), Gaps = 8/139 (5%)
Query: 345 WMNPKFSTTTRKVALTWPNSMDSEARIYHYKKYLREEENITVPDSAGRSIFEKDQFVLRE 404
W P RK P ++ S+ARI + + E N + G D + E
Sbjct: 126 WRPPILKQEDRK---PHPEAILSQARIMNMEAGTLAELN-----TPGELCIRGDVATVNE 177
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
G+ ++VGR KDMIIRG ENIYP E+E+F THP V E GV D+RMGEE+ I+LK
Sbjct: 178 QGFCKIVGRSKDMIIRGAENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEICAFIRLK 237
Query: 465 ENAKLNADDIRTFCKGKVS 483
+ + ++I+ FCKGKV
Sbjct: 238 DGEETTVEEIKAFCKGKVG 256
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 52/85 (61%)
Query: 104 SLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 163
+ D + E G+ ++VGR KDMIIRG ENIYP E+E+F THP V E GV D+RM
Sbjct: 167 CIRGDVATVNEQGFCKIVGRSKDMIIRGAENIYPAELEDFFHTHPKVQEVQVVGVKDDRM 226
Query: 164 GEEVGISIKLKENAKLNAYEDKSIS 188
GEE+ I+LK+ + E K+
Sbjct: 227 GEEICAFIRLKDGEETTVEEIKAFC 251
>gi|399009260|ref|ZP_10711701.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM17]
gi|398113155|gb|EJM03005.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM17]
Length = 564
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 80/168 (47%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D IVP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNIVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + E GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLATMNEQGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P + GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSKYGEEIVAWIKF 505
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P + GEE+
Sbjct: 440 DLATMNEQGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSKYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK + ++++ +CK +++ F
Sbjct: 500 VAWIKFHPGHSASEEELQAWCKARIAHF 527
>gi|440741171|ref|ZP_20920624.1| AMP-binding domain protein [Pseudomonas fluorescens BRIP34879]
gi|440373654|gb|ELQ10411.1| AMP-binding domain protein [Pseudomonas fluorescens BRIP34879]
Length = 544
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 76/165 (46%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ ++D V G GEL RG+ MLGYW + + T+ETIG WL TG
Sbjct: 368 LENAIIDAAGNTVARGEIGELCTRGYSVMLGYWNNPESTRETIGEAGWLHTG-------- 419
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + GY + GR KDMIIRGGEN+YP+
Sbjct: 420 -----------------------------DLATMDRHGYVCIAGRNKDMIIRGGENVYPR 450
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
E+EEF THP V + G+PDER GEE+ IK ++A E
Sbjct: 451 ELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKCHPGHAVDALE 495
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 63/105 (60%), Gaps = 6/105 (5%)
Query: 387 PDSAGRSIFEK------DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
P+S +I E D + GY + GR KDMIIRGGEN+YP+E+EEF THP V
Sbjct: 403 PESTRETIGEAGWLHTGDLATMDRHGYVCIAGRNKDMIIRGGENVYPRELEEFFFTHPAV 462
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ G+PDER GEE+ IK ++A ++ T+CKG+++ F
Sbjct: 463 ADVQVIGIPDERYGEEIVAWIKCHPGHAVDALELHTWCKGRIAHF 507
>gi|116622709|ref|YP_824865.1| AMP-dependent synthetase/ligase [Candidatus Solibacter usitatus
Ellin6076]
gi|116225871|gb|ABJ84580.1| AMP-dependent synthetase and ligase [Candidatus Solibacter usitatus
Ellin6076]
Length = 540
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 88/185 (47%), Gaps = 40/185 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ +T+ ++ + + ++ D + VP G GEL RG+ M GY ED + T I
Sbjct: 340 DPLELRVATVGAALANTEVRIADPESGTTVPIGEQGELCTRGYLVMKGYDEDPEATAAVI 399
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D +R DGY
Sbjct: 400 DRDGWLHTG-------------------------------------DLAAMRPDGYFSFR 422
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR KD IIRGGENIYP+E+E+F+ THP + + Y G+PD R+GE V ++LK A
Sbjct: 423 GRAKDTIIRGGENIYPREVEDFLHTHPKIADVYIIGIPDARLGETVLAWVQLKPGEAATA 482
Query: 182 YEDKS 186
E ++
Sbjct: 483 EEIQA 487
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D +R DGY GR KD IIRGGENIYP+E+E+F+ THP + + Y G+PD R+GE V
Sbjct: 409 DLAAMRPDGYFSFRGRAKDTIIRGGENIYPREVEDFLHTHPKIADVYIIGIPDARLGETV 468
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++LK A++I+ FCKGK++ F
Sbjct: 469 LAWVQLKPGEAATAEEIQAFCKGKIAYF 496
>gi|389574151|ref|ZP_10164220.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. M 2-6]
gi|388426340|gb|EIL84156.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. M 2-6]
Length = 545
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 76/150 (50%), Gaps = 37/150 (24%)
Query: 31 VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKP 90
VP G GEL RG+ M GY+++E+ T E I D WL TG
Sbjct: 383 VPRGQQGELCTRGYHVMKGYYKNEEATNEVIDEDGWLHTG-------------------- 422
Query: 91 LQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 150
D + DGY ++ GR+KDMIIRGGEN+YPKEIE+ + THP +
Sbjct: 423 -----------------DLAEMDHDGYVKITGRLKDMIIRGGENVYPKEIEDVLYTHPAI 465
Query: 151 LEAYAYGVPDERMGEEVGISIKLKENAKLN 180
L+A G+PDE GEE I+LK+ ++
Sbjct: 466 LDAQVVGIPDETYGEEAAAFIRLKQGKSVS 495
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
Query: 369 ARIYHYKK--YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIY 426
R YH K Y EE V D G + D + DGY ++ GR+KDMIIRGGEN+Y
Sbjct: 393 TRGYHVMKGYYKNEEATNEVIDEDGW-LHTGDLAEMDHDGYVKITGRLKDMIIRGGENVY 451
Query: 427 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
PKEIE+ + THP +L+A G+PDE GEE I+LK+ ++ + + ++C+ +++++
Sbjct: 452 PKEIEDVLYTHPAILDAQVVGIPDETYGEEAAAFIRLKQGKSVSIETLTSYCQSQMARY 510
>gi|339487838|ref|YP_004702366.1| acyl-CoA synthetase [Pseudomonas putida S16]
gi|338838681|gb|AEJ13486.1| acyl-CoA synthetase [Pseudomonas putida S16]
Length = 602
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 80/165 (48%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ KV+D + +P G GEL RG+ MLGYW + + T E+I + W+ TG
Sbjct: 427 LENKVIDADGNTLPRGEIGELCTRGYSVMLGYWNNPKATAESIDEEGWMHTG-------- 478
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E GY ++VGR KDMIIRGGENIYP+
Sbjct: 479 -----------------------------DLAVMDEQGYVRIVGRSKDMIIRGGENIYPR 509
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
E+EEF THP V + GVP + GEE+ ++L +A E
Sbjct: 510 ELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRLHPGHTASAEE 554
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 387 PDSAGRSIFEK------DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
P + SI E+ D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V
Sbjct: 462 PKATAESIDEEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAV 521
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ GVP + GEE+ ++L +A+++R + K +++ F
Sbjct: 522 ADVQVIGVPCSKYGEEIVAWVRLHPGHTASAEELRDWAKARIAHF 566
>gi|324506941|gb|ADY42950.1| Acyl-CoA synthetase family member 2 [Ascaris suum]
Length = 634
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 80/160 (50%), Gaps = 37/160 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++ +V ++ ++P G GE+L+RG+ M YW+ E TK I PDRW TG
Sbjct: 407 LESAIVGNDGTVLPRGERGEVLVRGYSVMRCYWDSEDMTKTEITPDRWYHTG-------- 458
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E+G +VGR KDMI+RGGENIYP
Sbjct: 459 -----------------------------DIGVMHENGTVSIVGRKKDMIVRGGENIYPT 489
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
E+E+++ HP + + GVPDER GE V I+L E AK
Sbjct: 490 EVEQYLFRHPMIEDVQIVGVPDERYGEVVCAWIRLNEEAK 529
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+G +VGR KDMI+RGGENIYP E+E+++ HP + + GVPDER GE V
Sbjct: 459 DIGVMHENGTVSIVGRKKDMIVRGGENIYPTEVEQYLFRHPMIEDVQIVGVPDERYGEVV 518
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSKF 485
I+L E AK + DIR FCKG+++ F
Sbjct: 519 CAWIRLNEEAKNITEQDIRDFCKGRIAHF 547
>gi|89097499|ref|ZP_01170388.1| acyl-CoA synthase [Bacillus sp. NRRL B-14911]
gi|89087795|gb|EAR66907.1| acyl-CoA synthase [Bacillus sp. NRRL B-14911]
Length = 586
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 76/158 (48%), Gaps = 37/158 (23%)
Query: 31 VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKP 90
VP GT GEL RG+ M GY+ + TKE I + WL TG
Sbjct: 415 VPRGTQGELCTRGYHVMKGYYNNPDATKEAIDSEGWLHTG-------------------- 454
Query: 91 LQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 150
D V+ E+GY + GR+KDM+IRGGENIYP+EIEEF+ THP V
Sbjct: 455 -----------------DLAVMDENGYCSITGRLKDMVIRGGENIYPREIEEFLYTHPKV 497
Query: 151 LEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
L+ GVPD GEE+ I LKE E +S
Sbjct: 498 LDVQVTGVPDPVFGEELMAWIILKEGETAGKEELRSFC 535
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 62/87 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY + GR+KDM+IRGGENIYP+EIEEF+ THP VL+ GVPD GEE+
Sbjct: 455 DLAVMDENGYCSITGRLKDMVIRGGENIYPREIEEFLYTHPKVLDVQVTGVPDPVFGEEL 514
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
I LKE +++R+FC+GK+S+
Sbjct: 515 MAWIILKEGETAGKEELRSFCRGKISR 541
>gi|238025755|ref|YP_002909986.1| AMP-binding domain-containing protein [Burkholderia glumae BGR1]
gi|237874949|gb|ACR27282.1| AMP-binding domain protein [Burkholderia glumae BGR1]
Length = 590
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 80/169 (47%), Gaps = 44/169 (26%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWED------EQKTKETIGPDRWLRTGRY 72
+AK+VD IVP G GEL RG+ M GYW D + T+ I D W+ TG
Sbjct: 405 LEAKIVDATGAIVPVGETGELCTRGYSVMSGYWCDGAGDGGDALTRAAI-VDGWMHTG-- 461
Query: 73 KKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGG 132
D E+G+ +VGR+KDM+IRGG
Sbjct: 462 -----------------------------------DLATFDEEGFCNIVGRLKDMLIRGG 486
Query: 133 ENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
ENIYP+EIEEF+ HP + A +GVPD + GEEV + L+ L+A
Sbjct: 487 ENIYPREIEEFLFRHPKIQSAQVFGVPDAKYGEEVCAWVVLRAGETLDA 535
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D E+G+ +VGR+KDM+IRGGENIYP+EIEEF+ HP + A +GVPD + GEEV
Sbjct: 462 DLATFDEEGFCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSAQVFGVPDAKYGEEV 521
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ L+ L+A+ +R FC+G+++ +
Sbjct: 522 CAWVVLRAGETLDAEALREFCRGQIAHY 549
>gi|324510383|gb|ADY44340.1| Acyl-CoA synthetase family member 2, partial [Ascaris suum]
Length = 528
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 80/160 (50%), Gaps = 37/160 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++ +V ++ ++P G GE+L+RG+ M YW+ E TK I PDRW TG
Sbjct: 374 LESAIVGNDGTVLPRGERGEVLVRGYSVMRCYWDSEDMTKTEITPDRWYHTG-------- 425
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E+G +VGR KDMI+RGGENIYP
Sbjct: 426 -----------------------------DIGVMHENGTVSIVGRKKDMIVRGGENIYPT 456
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
E+E+++ HP + + GVPDER GE V I+L E AK
Sbjct: 457 EVEQYLFRHPMIEDVQIVGVPDERYGEVVCAWIRLNEEAK 496
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+G +VGR KDMI+RGGENIYP E+E+++ HP + + GVPDER GE V
Sbjct: 426 DIGVMHENGTVSIVGRKKDMIVRGGENIYPTEVEQYLFRHPMIEDVQIVGVPDERYGEVV 485
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSKF 485
I+L E AK + DIR FCKG+++ F
Sbjct: 486 CAWIRLNEEAKNITEQDIRDFCKGRIAHF 514
>gi|222056632|ref|YP_002538994.1| AMP-binding protein [Geobacter daltonii FRC-32]
gi|221565921|gb|ACM21893.1| AMP-dependent synthetase and ligase [Geobacter daltonii FRC-32]
Length = 550
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 91/184 (49%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ +T+ + + K+VD +P G GEL RG+ M GY++ ++T + I
Sbjct: 354 DPVELRVATVGRALPGAEVKIVDIETGATLPPGKQGELCARGYMVMKGYYKMPEETAKVI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D V+ E GY ++
Sbjct: 414 DNDGWLHTG-------------------------------------DLAVMDESGYCKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIK MIIRGGENIYPKEIEE++ THP + + YGVPD + GE+V ++ LK+ +
Sbjct: 437 GRIKQMIIRGGENIYPKEIEEYLYTHPKISDVQIYGVPDRKFGEQVMAAVILKKGEIMTE 496
Query: 182 YEDK 185
E K
Sbjct: 497 DEVK 500
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 75/119 (63%), Gaps = 3/119 (2%)
Query: 369 ARIYHYKK--YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIY 426
AR Y K Y EE V D+ G + D V+ E GY ++ GRIK MIIRGGENIY
Sbjct: 393 ARGYMVMKGYYKMPEETAKVIDNDGW-LHTGDLAVMDESGYCKITGRIKQMIIRGGENIY 451
Query: 427 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
PKEIEE++ THP + + YGVPD + GE+V ++ LK+ + D+++ FCKG+++ +
Sbjct: 452 PKEIEEYLYTHPKISDVQIYGVPDRKFGEQVMAAVILKKGEIMTEDEVKDFCKGRIANY 510
>gi|398938415|ref|ZP_10667818.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM41(2012)]
gi|398165963|gb|EJM54073.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM41(2012)]
Length = 564
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 81/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D +VP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK +++T+CK +++ F
Sbjct: 500 VAWIKFHPGHSATEQELQTWCKERIAHF 527
>gi|383320319|ref|YP_005381160.1| acyl-CoA synthetase/AMP-acid ligase [Methanocella conradii HZ254]
gi|379321689|gb|AFD00642.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[Methanocella conradii HZ254]
Length = 583
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 90/184 (48%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSSSSFQA--KVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + + ST+ A K+VD ++VP G PGE+ RG+ M GY+ + + T I
Sbjct: 383 DPLERRVSTVGKPMPHAEIKIVDPKTGKMVPRGQPGEICARGYMIMKGYYNNPEATSLAI 442
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D +L ++GY ++
Sbjct: 443 DKDGWLHTG-------------------------------------DLGILDDEGYCKIT 465
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDM+IRGGENIYP+E+EEF+ HP++ + GVPD + GEE+ IKLK +
Sbjct: 466 GRLKDMVIRGGENIYPREVEEFLYEHPSISDVQVIGVPDLKYGEELMAWIKLKNGCNVTP 525
Query: 182 YEDK 185
E K
Sbjct: 526 EEIK 529
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D +L ++GY ++ GR+KDM+IRGGENIYP+E+EEF+ HP++ + GVPD + GEE+
Sbjct: 452 DLGILDDEGYCKITGRLKDMVIRGGENIYPREVEEFLYEHPSISDVQVIGVPDLKYGEEL 511
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKLK + ++I+ FC+GK++ +
Sbjct: 512 MAWIKLKNGCNVTPEEIKEFCRGKIAHY 539
>gi|398894512|ref|ZP_10646722.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM55]
gi|398182332|gb|EJM69852.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM55]
Length = 564
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 81/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D +VP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK +++T+CK +++ F
Sbjct: 500 VAWIKFHPGHSATEQELQTWCKERIAHF 527
>gi|398878775|ref|ZP_10633883.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM67]
gi|398198250|gb|EJM85209.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM67]
Length = 565
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 81/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D +VP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK +++T+CK +++ F
Sbjct: 500 VAWIKFHPGHSATEQELQTWCKERIAHF 527
>gi|398885459|ref|ZP_10640370.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM60]
gi|398192488|gb|EJM79640.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM60]
Length = 565
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 81/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D +VP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK +++T+CK +++ F
Sbjct: 500 VAWIKFHPGHSATEQELQTWCKERIAHF 527
>gi|398996416|ref|ZP_10699273.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
gi|398126947|gb|EJM16368.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
Length = 565
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 81/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D +VP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVNIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGEN+YP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENVYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY + GR KDMIIRGGEN+YP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNDEGYVNIAGRNKDMIIRGGENVYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK +++ +CK +++ F
Sbjct: 500 VAWIKFHPGHSATEQELQAWCKERIAHF 527
>gi|398841820|ref|ZP_10599027.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM102]
gi|398107306|gb|EJL97309.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM102]
Length = 564
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 81/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D +VP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDEAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK +++ +CK +++ F
Sbjct: 500 VAWIKFHPGHSATEQELQAWCKERIAHF 527
>gi|398916882|ref|ZP_10657938.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM49]
gi|398173935|gb|EJM61749.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM49]
Length = 565
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 81/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D +VP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK +++ +CK +++ F
Sbjct: 500 VAWIKFHPGHSATEQELQAWCKERIAHF 527
>gi|355571892|ref|ZP_09043100.1| Long-chain-fatty-acid--CoA ligase [Methanolinea tarda NOBI-1]
gi|354824988|gb|EHF09223.1| Long-chain-fatty-acid--CoA ligase [Methanolinea tarda NOBI-1]
Length = 566
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 88/182 (48%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + + ST+ + K++D RIVP G GE+ RG+C M Y+ + T T+
Sbjct: 366 DPLERRVSTVGRVFPHTEIKIIDPKTGRIVPRGEVGEICARGYCVMKCYYNNPSATHATL 425
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
DRW TG D + +GY ++V
Sbjct: 426 DADRWNHTG-------------------------------------DLGTMDAEGYVKIV 448
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDM+IRGGENIYP+EIEEF+ HP + + Y GVPDE+ GEE+ I +++ +
Sbjct: 449 GRLKDMVIRGGENIYPREIEEFLHNHPKIADVYVIGVPDEKYGEELMAWIMVEKGETMTG 508
Query: 182 YE 183
E
Sbjct: 509 EE 510
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY ++VGR+KDM+IRGGENIYP+EIEEF+ HP + + Y GVPDE+ GEE+
Sbjct: 435 DLGTMDAEGYVKIVGRLKDMVIRGGENIYPREIEEFLHNHPKIADVYVIGVPDEKYGEEL 494
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I +++ + +++R FC+GK++ +
Sbjct: 495 MAWIMVEKGETMTGEEVREFCRGKIAHY 522
>gi|403367160|gb|EJY83390.1| AMP-binding enzyme family protein [Oxytricha trifallax]
Length = 485
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 38/148 (25%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+++ ++ + +G PGE+ RG+ M GY+ D++K+K+TI P WLRTG
Sbjct: 354 ELKIINPETSQTLKWGEPGEVCARGYGVMTGYFNDQEKSKDTICPKGWLRTG-------- 405
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
+G F EDG+ +++GR KDMIIRGGENIYP+
Sbjct: 406 -------------------DLGQF----------DEDGFLKIIGRSKDMIIRGGENIYPR 436
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEE 166
EIEEF +H NVL+ GV DE MGEE
Sbjct: 437 EIEEFFMSHSNVLDVQVIGVTDEFMGEE 464
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 42/53 (79%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEE 456
EDG+ +++GR KDMIIRGGENIYP+EIEEF +H NVL+ GV DE MGEE
Sbjct: 412 EDGFLKIIGRSKDMIIRGGENIYPREIEEFFMSHSNVLDVQVIGVTDEFMGEE 464
>gi|302906369|ref|XP_003049465.1| hypothetical protein NECHADRAFT_45450 [Nectria haematococca mpVI
77-13-4]
gi|256730400|gb|EEU43752.1| hypothetical protein NECHADRAFT_45450 [Nectria haematococca mpVI
77-13-4]
Length = 590
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 94/202 (46%), Gaps = 50/202 (24%)
Query: 21 AKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR----WLRTGRYKKTS 76
AKVVD + + VP G GE+LI G+ + GYW++ Q T+E + + WLRTG
Sbjct: 405 AKVVDTDGKTVPLGQRGEILIAGYNSFRGYWKNPQGTEEMLHKEDDGTVWLRTG------ 458
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
D+ L +DG+ +V GRIKD+IIRGGENIY
Sbjct: 459 -------------------------------DEVTLDKDGFCRVTGRIKDIIIRGGENIY 487
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDYHEFET 196
P EIE+ + HP++++A G+ D + GE V ++ +E + + E +T
Sbjct: 488 PAEIEDCLVQHPSIIQASVVGIKDAKYGEVVAAFVQKEEGS-------GPVRPSTSELQT 540
Query: 197 MYDSIMAHPNRTTPYYQWWSYD 218
+A P Y WW D
Sbjct: 541 WVGKTLAR--HKIPAYIWWIGD 560
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 49/70 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ L +DG+ +V GRIKD+IIRGGENIYP EIE+ + HP++++A G+ D + GE V
Sbjct: 459 DEVTLDKDGFCRVTGRIKDIIIRGGENIYPAEIEDCLVQHPSIIQASVVGIKDAKYGEVV 518
Query: 458 GISIKLKENA 467
++ +E +
Sbjct: 519 AAFVQKEEGS 528
>gi|451346780|ref|YP_007445411.1| AMP-binding domain protein [Bacillus amyloliquefaciens IT-45]
gi|449850538|gb|AGF27530.1| AMP-binding domain protein [Bacillus amyloliquefaciens IT-45]
Length = 546
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V + GVPD + GEE
Sbjct: 423 DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDPKYGEEA 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++LKE +A+DIRTFCK ++++
Sbjct: 483 AAWVRLKEGQTASAEDIRTFCKEHIARY 510
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 79/158 (50%), Gaps = 37/158 (23%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY+++++ T+E I D WL TG
Sbjct: 386 GEQGELCTRGYHVMKGYYKNQEATEEAIDKDGWLHTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V +
Sbjct: 423 --------------DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDY 191
GVPD + GEE ++LKE +A + ++ ++
Sbjct: 469 QVVGVPDPKYGEEAAAWVRLKEGQTASAEDIRTFCKEH 506
>gi|398857242|ref|ZP_10612943.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM79]
gi|398241091|gb|EJN26750.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM79]
Length = 568
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 81/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D +VP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDEAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK +++ +CK +++ F
Sbjct: 500 VAWIKFHPGHNATEQELQAWCKERIAHF 527
>gi|146295968|ref|YP_001179739.1| AMP-dependent synthetase and ligase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409544|gb|ABP66548.1| AMP-dependent synthetase and ligase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 553
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 92/184 (50%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + + ST+ + K+VD N + VP GT GE+ RG+ M GY++ + TK+ I
Sbjct: 353 DPLEFRVSTVGRPLEGVEVKIVDINTKEEVPNGTIGEICARGYNIMKGYYKMPEATKQAI 412
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D + ++GY ++
Sbjct: 413 DEDGWLHTG-------------------------------------DLGYIDQNGYLRIT 435
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ THP + + GVPD+ GEE+ + LK+ A +
Sbjct: 436 GRLKDMIIRGGENIYPREIEEFLYTHPAIKDVQVVGVPDKVYGEEIMAFVILKDGASVTE 495
Query: 182 YEDK 185
E K
Sbjct: 496 EEIK 499
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 59/83 (71%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ ++GY ++ GR+KDMIIRGGENIYP+EIEEF+ THP + + GVPD+ GEE+ +
Sbjct: 426 IDQNGYLRITGRLKDMIIRGGENIYPREIEEFLYTHPAIKDVQVVGVPDKVYGEEIMAFV 485
Query: 462 KLKENAKLNADDIRTFCKGKVSK 484
LK+ A + ++I+ + + +S+
Sbjct: 486 ILKDGASVTEEEIKEYVRQNLSR 508
>gi|148653865|ref|YP_001280958.1| AMP-binding domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148572949|gb|ABQ95008.1| AMP-dependent synthetase and ligase [Psychrobacter sp. PRwf-1]
Length = 596
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 87/189 (46%), Gaps = 41/189 (21%)
Query: 5 NPTDLQFST--LSSSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P D Q ST L + + K+VD +VP G GELL RG+ M GYW KT+E I
Sbjct: 406 TPLDKQVSTVGLVQPNLEVKIVDTQTGEVVPIGETGELLTRGYSVMKGYWGSRFKTREAI 465
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ TG D + EDGY +VV
Sbjct: 466 -QDGWMHTG-------------------------------------DLATMDEDGYIKVV 487
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR KDM+IRGGENIYP EIE ++ HP + + GVPD++ GE + I ++ +L
Sbjct: 488 GRSKDMVIRGGENIYPVEIENYLYRHPKISDVQVVGVPDKKYGEVLAAWIIARKGEQLTE 547
Query: 182 YEDKSISSD 190
E K D
Sbjct: 548 DEVKQFCKD 556
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDGY +VVGR KDM+IRGGENIYP EIE ++ HP + + GVPD++ GE +
Sbjct: 474 DLATMDEDGYIKVVGRSKDMVIRGGENIYPVEIENYLYRHPKISDVQVVGVPDKKYGEVL 533
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I ++ +L D+++ FCK ++ +
Sbjct: 534 AAWIIARKGEQLTEDEVKQFCKDNIAHY 561
>gi|93005170|ref|YP_579607.1| AMP-binding domain-containing protein [Psychrobacter cryohalolentis
K5]
gi|92392848|gb|ABE74123.1| AMP-dependent synthetase and ligase [Psychrobacter cryohalolentis
K5]
Length = 602
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 87/190 (45%), Gaps = 41/190 (21%)
Query: 5 NPTDLQFST--LSSSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P D Q ST L + + KV+D IV G GELL RG+ M GYW KT+E I
Sbjct: 412 TPLDKQVSTVGLVQPALEVKVIDTETGEIVRLGETGELLTRGYSVMKGYWGSRFKTREAI 471
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ TG D + EDGY ++V
Sbjct: 472 -QDGWMHTG-------------------------------------DLATMDEDGYVKIV 493
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR KDM+IRGGENIYP EIE ++ HP + + GVPDE+ GE + I KE L
Sbjct: 494 GRSKDMVIRGGENIYPVEIENYLYRHPKIRDVQIVGVPDEKYGEVLAAWIIPKEAGSLTE 553
Query: 182 YEDKSISSDY 191
E + S++
Sbjct: 554 EEVRQFCSEH 563
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDGY ++VGR KDM+IRGGENIYP EIE ++ HP + + GVPDE+ GE +
Sbjct: 480 DLATMDEDGYVKIVGRSKDMVIRGGENIYPVEIENYLYRHPKIRDVQIVGVPDEKYGEVL 539
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I KE L +++R FC ++ +
Sbjct: 540 AAWIIPKEAGSLTEEEVRQFCSEHIAHY 567
>gi|312622916|ref|YP_004024529.1| amp-dependent synthetase and ligase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203383|gb|ADQ46710.1| AMP-dependent synthetase and ligase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 553
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 87/176 (49%), Gaps = 40/176 (22%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + + ST+ + K+VD H + VP G GE+ RG+ M GY++ + TK+ I
Sbjct: 353 DPLEFRVSTVGKPLEGVEVKIVDIHTKKEVPNGVIGEICARGYNVMRGYYKMPEATKQAI 412
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D + ++GY ++
Sbjct: 413 DEDGWLHTG-------------------------------------DLGYIDQNGYLRIT 435
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
GR+KDMIIRGGENIYP+EIEEF+ THP V + GVPD+ GEE+ I LK+
Sbjct: 436 GRLKDMIIRGGENIYPREIEEFLYTHPAVKDVQVVGVPDKVYGEEIAAFIILKDGC 491
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 58/83 (69%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ ++GY ++ GR+KDMIIRGGENIYP+EIEEF+ THP V + GVPD+ GEE+ I
Sbjct: 426 IDQNGYLRITGRLKDMIIRGGENIYPREIEEFLYTHPAVKDVQVVGVPDKVYGEEIAAFI 485
Query: 462 KLKENAKLNADDIRTFCKGKVSK 484
LK+ + ++I+ F K +S+
Sbjct: 486 ILKDGCYASEEEIKEFVKANLSR 508
>gi|312961757|ref|ZP_07776255.1| long-chain fatty-acid-CoA ligase [Pseudomonas fluorescens WH6]
gi|311284016|gb|EFQ62599.1| long-chain fatty-acid-CoA ligase [Pseudomonas fluorescens WH6]
Length = 542
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 78/165 (47%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K++D + G GEL RG+ MLGYW + + T++ I P W+ TG
Sbjct: 368 LENKIIDAAGNTLARGEIGELCTRGYSVMLGYWNNPEGTRDAIDPAGWMHTG-------- 419
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E GY +VGR KDMIIRGGEN+YP+
Sbjct: 420 -----------------------------DLATMDEQGYVCIVGRNKDMIIRGGENVYPR 450
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
E+EEF THP V + G+PDER GEE+ +K ++N E
Sbjct: 451 ELEEFFFTHPAVADVQVIGIPDERYGEEIVAWVKCHPGHEVNELE 495
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY +VGR KDMIIRGGEN+YP+E+EEF THP V + G+PDER GEE+
Sbjct: 420 DLATMDEQGYVCIVGRNKDMIIRGGENVYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 479
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+K ++N ++ +CKG+++ F
Sbjct: 480 VAWVKCHPGHEVNELELLDWCKGRIAHF 507
>gi|153005842|ref|YP_001380167.1| AMP-binding domain-containing protein [Anaeromyxobacter sp.
Fw109-5]
gi|152029415|gb|ABS27183.1| AMP-dependent synthetase and ligase [Anaeromyxobacter sp. Fw109-5]
Length = 546
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 89/180 (49%), Gaps = 40/180 (22%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P D + ST+ + K+VD R+VP G PGEL RG+ MLGYW+D T+ I
Sbjct: 346 DPLDKRVSTVGQVHPHVEIKIVDPTTGRVVPRGAPGELCTRGYSVMLGYWDDAAATRAAI 405
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
RW+ TG D L +GY ++V
Sbjct: 406 DAGRWMHTG-------------------------------------DLATLDAEGYVKIV 428
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIKDM++RGGEN++P+E+EEF+ T P + + GVPD + GEE+ +KL+ L+
Sbjct: 429 GRIKDMVLRGGENVFPREVEEFLYTIPGISDVQVIGVPDAKYGEELMAWVKLRPGVTLDG 488
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 63/95 (66%)
Query: 391 GRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPD 450
GR + D L +GY ++VGRIKDM++RGGEN++P+E+EEF+ T P + + GVPD
Sbjct: 408 GRWMHTGDLATLDAEGYVKIVGRIKDMVLRGGENVFPREVEEFLYTIPGISDVQVIGVPD 467
Query: 451 ERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ GEE+ +KL+ L+ + IR C+GK++ +
Sbjct: 468 AKYGEELMAWVKLRPGVTLDGEAIRRLCRGKIATY 502
>gi|89092350|ref|ZP_01165304.1| acyl-CoA synthase [Neptuniibacter caesariensis]
gi|89083438|gb|EAR62656.1| acyl-CoA synthase [Oceanospirillum sp. MED92]
Length = 562
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 87/176 (49%), Gaps = 40/176 (22%)
Query: 5 NPTDLQFSTLSSSS--FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + Q +T+ + + K+VD + +V G GEL RG+ ML YW + + T I
Sbjct: 367 DPFEKQVTTVGRTQPHLETKIVDPASGNVVARGEVGELCTRGYSVMLKYWNNPEATAGAI 426
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
W+ TG D + E+GY Q+V
Sbjct: 427 DNGGWMHTG-------------------------------------DLATMDEEGYIQIV 449
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
GRIKDM+IRGGEN+YPKEIEEF+ THP++ + GVPD++ GEE+ +KL A
Sbjct: 450 GRIKDMVIRGGENVYPKEIEEFLYTHPSISDVQVTGVPDKKYGEELVAWVKLAPGA 505
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY Q+VGRIKDM+IRGGEN+YPKEIEEF+ THP++ + GVPD++ GEE+
Sbjct: 436 DLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYTHPSISDVQVTGVPDKKYGEEL 495
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
+KL A ++ ++++ FCKGK++ F
Sbjct: 496 VAWVKLAPGADEVTEEELKAFCKGKITHF 524
>gi|358368603|dbj|GAA85219.1| AMP-binding enzyme [Aspergillus kawachii IFO 4308]
Length = 594
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 91/190 (47%), Gaps = 47/190 (24%)
Query: 5 NPTDLQFSTLSS--SSFQAKVV---DHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKE 59
+P D + +T+ +AKVV DHNN I+P T GEL + G+ M YW D KT E
Sbjct: 388 DPVDKRINTVGKLLPHVEAKVVSLDDHNN-ILPINTRGELAVSGYLLMKEYWNDPVKTAE 446
Query: 60 TIGPDR----WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLRED 115
+ D W+ TG D+ + D
Sbjct: 447 VMVADNDGKVWMHTG-------------------------------------DEASMSPD 469
Query: 116 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 175
GY + GR+KD+IIRGGENI+P EIE + T+P V++A A GVPDER GE V + I +E
Sbjct: 470 GYITITGRVKDLIIRGGENIHPLEIENCLLTYPGVIDASAVGVPDERYGEAVAVFIIHRE 529
Query: 176 NAKLNAYEDK 185
A EDK
Sbjct: 530 PESEAADEDK 539
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Query: 384 ITVPDSAGRS-IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 442
+ V D+ G+ + D+ + DGY + GR+KD+IIRGGENI+P EIE + T+P V++
Sbjct: 447 VMVADNDGKVWMHTGDEASMSPDGYITITGRVKDLIIRGGENIHPLEIENCLLTYPGVID 506
Query: 443 AYAYGVPDERMGEEVGISI--KLKENAKLNADDIRTFCKGKVS 483
A A GVPDER GE V + I + E+ + D IR + + K+S
Sbjct: 507 ASAVGVPDERYGEAVAVFIIHREPESEAADEDKIRQWVREKLS 549
>gi|423692301|ref|ZP_17666821.1| long-chain-fatty-acid--CoA ligase [Pseudomonas fluorescens SS101]
gi|387999829|gb|EIK61158.1| long-chain-fatty-acid--CoA ligase [Pseudomonas fluorescens SS101]
Length = 543
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 77/172 (44%), Gaps = 37/172 (21%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD V G GEL RG+ MLGYW + + T+E I W+ TG
Sbjct: 368 LETKIVDEAGNTVARGVIGELCTRGYSVMLGYWNNPEGTREAIDDAGWMHTG-------- 419
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E+GY + GR KDMIIRGGEN+YP+
Sbjct: 420 -----------------------------DLATMDEEGYVCIAGRNKDMIIRGGENVYPR 450
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
E+EEF THP V + G+PDER GEE+ IK N E S D
Sbjct: 451 ELEEFFFTHPAVADVQIVGIPDERYGEEIVAWIKFHPGQVANELELLSWCKD 502
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY + GR KDMIIRGGEN+YP+E+EEF THP V + G+PDER GEE+
Sbjct: 420 DLATMDEEGYVCIAGRNKDMIIRGGENVYPRELEEFFFTHPAVADVQIVGIPDERYGEEI 479
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK N ++ ++CK +++ F
Sbjct: 480 VAWIKFHPGQVANELELLSWCKDRIAHF 507
>gi|322419002|ref|YP_004198225.1| AMP-dependent synthetase and ligase [Geobacter sp. M18]
gi|320125389|gb|ADW12949.1| AMP-dependent synthetase and ligase [Geobacter sp. M18]
Length = 549
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 92/184 (50%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ +T+ + + K+VD +P G GEL RG+ M GY+ ++T + I
Sbjct: 354 DPIELKVATVGRVLPNVELKIVDIETGAELPPGKQGELCTRGYLVMKGYYRMPEETAKAI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
WL TG D V+ E+GY ++
Sbjct: 414 DAQGWLHTG-------------------------------------DLAVMDENGYCKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIK+MIIRGGENIYP+EIEEF+ THP + + YGVPD + GE+V +I LK+ + +
Sbjct: 437 GRIKNMIIRGGENIYPREIEEFLYTHPGISDIQVYGVPDRKYGEQVMAAIVLKKGSDMTE 496
Query: 182 YEDK 185
E K
Sbjct: 497 EEVK 500
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 72/111 (64%)
Query: 375 KKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFI 434
K Y R E A + D V+ E+GY ++ GRIK+MIIRGGENIYP+EIEEF+
Sbjct: 400 KGYYRMPEETAKAIDAQGWLHTGDLAVMDENGYCKITGRIKNMIIRGGENIYPREIEEFL 459
Query: 435 QTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
THP + + YGVPD + GE+V +I LK+ + + ++++ FC+G+++ +
Sbjct: 460 YTHPGISDIQVYGVPDRKYGEQVMAAIVLKKGSDMTEEEVKEFCRGRIANY 510
>gi|121596053|ref|YP_987949.1| AMP-binding domain-containing protein [Acidovorax sp. JS42]
gi|120608133|gb|ABM43873.1| AMP-dependent synthetase and ligase [Acidovorax sp. JS42]
Length = 578
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 78/161 (48%), Gaps = 38/161 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K++D +VP G GEL +G+ M GYW DE KT+E I W+ TG
Sbjct: 397 LEVKIIDPETGAVVPRGERGELCTQGYSVMHGYWGDEAKTREAIDEGGWMHTG------- 449
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + ++GY +VGRIKDM+IRGGEN+YP
Sbjct: 450 ------------------------------DLATMDDEGYVNIVGRIKDMVIRGGENVYP 479
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ HP V + GVPD+R GEE+ I K +
Sbjct: 480 REIEEFLYRHPMVQDVQVVGVPDQRFGEELCAWIIAKPGTR 520
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY +VGRIKDM+IRGGEN+YP+EIEEF+ HP V + GVPD+R GEE+
Sbjct: 450 DLATMDDEGYVNIVGRIKDMVIRGGENVYPREIEEFLYRHPMVQDVQVVGVPDQRFGEEL 509
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I K + + DDIR FCKG+++ +
Sbjct: 510 CAWIIAKPGTRPSEDDIRAFCKGQIAHY 537
>gi|325964235|ref|YP_004242141.1| acyl-CoA synthetase [Arthrobacter phenanthrenivorans Sphe3]
gi|323470322|gb|ADX74007.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Arthrobacter
phenanthrenivorans Sphe3]
Length = 558
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 78/161 (48%), Gaps = 38/161 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
++KVVD + ++ G GEL RG+ M GYW KT E I PD W+ TG +
Sbjct: 382 LESKVVDPASGEVLERGQIGELCTRGYAVMAGYWNQPDKTIEAIDPDGWMHTGDLAR--- 438
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
+ DGY + GRIKDM+IRGGENIYP
Sbjct: 439 ----------------------------------MDGDGYVVIEGRIKDMVIRGGENIYP 464
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP+V + GVPD GEE+ I LK A+
Sbjct: 465 REIEEFLYTHPSVQDVQVIGVPDATYGEELMACIILKPGAE 505
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY + GRIKDM+IRGGENIYP+EIEEF+ THP+V + GVPD GEE+ I LK
Sbjct: 442 DGYVVIEGRIKDMVIRGGENIYPREIEEFLYTHPSVQDVQVIGVPDATYGEELMACIILK 501
Query: 465 ENAK-LNADDIRTFCKGKVSKF 485
A+ L+ + FC+GK++ +
Sbjct: 502 PGAEPLDQAAVAGFCRGKLAHY 523
>gi|311068394|ref|YP_003973317.1| AMP-binding protein [Bacillus atrophaeus 1942]
gi|419823695|ref|ZP_14347237.1| AMP-binding domain protein [Bacillus atrophaeus C89]
gi|310868911|gb|ADP32386.1| AMP-binding domain protein [Bacillus atrophaeus 1942]
gi|388472185|gb|EIM08966.1| AMP-binding domain protein [Bacillus atrophaeus C89]
Length = 548
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 79/133 (59%), Gaps = 3/133 (2%)
Query: 353 TTRKVALTWPNSMDSEARIYHYKK-YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVV 411
T+R+VA + + R YH K Y ++ E A + D V+ E GY ++
Sbjct: 379 TSREVARGVQGELCT--RGYHVMKGYYKDPEATASAIDADGWLHTGDLAVMDEQGYCRIT 436
Query: 412 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 471
GR+KDM+IRGGENIYP+EIEE + HP VL+ GVPD + GEE +KLKE +
Sbjct: 437 GRLKDMLIRGGENIYPREIEELLYQHPKVLDVQVVGVPDAKFGEEAAAWVKLKEGQTASP 496
Query: 472 DDIRTFCKGKVSK 484
++++ +CKGK+++
Sbjct: 497 EELQAYCKGKIAR 509
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 72/150 (48%), Gaps = 37/150 (24%)
Query: 27 NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRR 86
+R V G GEL RG+ M GY++D + T I D WL TG
Sbjct: 379 TSREVARGVQGELCTRGYHVMKGYYKDPEATASAIDADGWLHTG---------------- 422
Query: 87 KLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 146
D V+ E GY ++ GR+KDM+IRGGENIYP+EIEE +
Sbjct: 423 ---------------------DLAVMDEQGYCRITGRLKDMLIRGGENIYPREIEELLYQ 461
Query: 147 HPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
HP VL+ GVPD + GEE +KLKE
Sbjct: 462 HPKVLDVQVVGVPDAKFGEEAAAWVKLKEG 491
>gi|150014678|gb|ABR57200.1| Acs [Pseudomonas putida]
Length = 557
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 77/155 (49%), Gaps = 37/155 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ KVVD + VP G GEL RG+ MLGYW + + T ++I + W+ TG
Sbjct: 382 LENKVVDADGNTVPRGEIGELCTRGYSVMLGYWNNLKATADSIDAEGWMHTG-------- 433
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E GY ++VGR KDMIIRGGENIYP+
Sbjct: 434 -----------------------------DLAVMDEQGYVRIVGRSKDMIIRGGENIYPR 464
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
E+EEF THP V + GVP + GEE+ ++L
Sbjct: 465 ELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRL 499
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++VGR KDMIIRGGENIYP+E+EEF THP V + GVP + GEE+
Sbjct: 434 DLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEI 493
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++L + + +R + + +++ F
Sbjct: 494 VAWVRLHPGHTASEEALREWARARIAHF 521
>gi|423129005|ref|ZP_17116680.1| hypothetical protein HMPREF9714_00080 [Myroides odoratimimus CCUG
12901]
gi|371649847|gb|EHO15323.1| hypothetical protein HMPREF9714_00080 [Myroides odoratimimus CCUG
12901]
Length = 537
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 81/173 (46%), Gaps = 38/173 (21%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K++D RIVP G GEL RG+ ML YW + T E + +RW+ TG
Sbjct: 362 LEIKIIDPETGRIVPRGEAGELCTRGYSVMLKYWNNRTLTSEVLDENRWMHTG------- 414
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + + GY + GRIKD+IIRGGENI P
Sbjct: 415 ------------------------------DLATMDDQGYISITGRIKDLIIRGGENISP 444
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
K IE+F+ THP++ + GVPDE+ GEE+ + LK L E K ++
Sbjct: 445 KWIEDFLYTHPSIADVQVIGVPDEKYGEEIMAWVILKPGITLTGEELKGFCTE 497
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%)
Query: 392 RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDE 451
R + D + + GY + GRIKD+IIRGGENI PK IE+F+ THP++ + GVPDE
Sbjct: 409 RWMHTGDLATMDDQGYISITGRIKDLIIRGGENISPKWIEDFLYTHPSIADVQVIGVPDE 468
Query: 452 RMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ GEE+ + LK L ++++ FC K++ F
Sbjct: 469 KYGEEIMAWVILKPGITLTGEELKGFCTEKIAHF 502
>gi|386001613|ref|YP_005919912.1| AMP-dependent acyl-CoA synthetase and ligase [Methanosaeta
harundinacea 6Ac]
gi|357209669|gb|AET64289.1| AMP-dependent acyl-CoA synthetase and ligase [Methanosaeta
harundinacea 6Ac]
Length = 569
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 64/88 (72%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D +L ++ Y ++ GR+KDM+IRGGENIYP+EIEEF+ THP++ + GVPD R GEE+
Sbjct: 438 DLGILDDEDYCKITGRLKDMVIRGGENIYPREIEEFLYTHPDISDVQVIGVPDARYGEEL 497
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKLKE L A+++ FC+G+++ F
Sbjct: 498 MAWIKLKEGRTLTAEEVLAFCRGRIAHF 525
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 81/165 (49%), Gaps = 38/165 (23%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+ D +I+ G GE+ RG+ M Y+ + T++ I + WL TG
Sbjct: 386 EVKITDPKTGKIMHRGETGEICARGYAIMRCYYNNPGATEKAIDKEGWLHTG-------- 437
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D +L ++ Y ++ GR+KDM+IRGGENIYP+
Sbjct: 438 -----------------------------DLGILDDEDYCKITGRLKDMVIRGGENIYPR 468
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
EIEEF+ THP++ + GVPD R GEE+ IKLKE L A E
Sbjct: 469 EIEEFLYTHPDISDVQVIGVPDARYGEELMAWIKLKEGRTLTAEE 513
>gi|222112214|ref|YP_002554478.1| AMP-binding protein [Acidovorax ebreus TPSY]
gi|221731658|gb|ACM34478.1| AMP-dependent synthetase and ligase [Acidovorax ebreus TPSY]
Length = 578
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 78/161 (48%), Gaps = 38/161 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K++D +VP G GEL +G+ M GYW DE KT+E I W+ TG
Sbjct: 397 LEVKIIDPETGAVVPRGERGELCTQGYSVMHGYWGDEAKTREAIDEGGWMHTG------- 449
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + ++GY +VGRIKDM+IRGGEN+YP
Sbjct: 450 ------------------------------DLATMDDEGYVNIVGRIKDMVIRGGENVYP 479
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ HP V + GVPD+R GEE+ I K +
Sbjct: 480 REIEEFLYRHPMVQDVQVVGVPDQRFGEELCAWIIAKPGTR 520
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY +VGRIKDM+IRGGEN+YP+EIEEF+ HP V + GVPD+R GEE+
Sbjct: 450 DLATMDDEGYVNIVGRIKDMVIRGGENVYPREIEEFLYRHPMVQDVQVVGVPDQRFGEEL 509
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I K + + DDIR FCKG+++ +
Sbjct: 510 CAWIIAKPGTRPSEDDIRAFCKGQIAHY 537
>gi|5051464|emb|CAB44985.1| unnamed protein product [Pseudomonas putida]
Length = 226
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 76/155 (49%), Gaps = 37/155 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++KVVD VP G GEL RG+ MLGYW + + T E+I D W+ TG
Sbjct: 51 LESKVVDTEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAESIDVDGWMHTG-------- 102
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D ++ E GY +VGR KDMIIRGGENIYP+
Sbjct: 103 -----------------------------DLAMMDEHGYVCIVGRSKDMIIRGGENIYPR 133
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
E+EEF THP V + GVP + GEE+ ++L
Sbjct: 134 ELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRL 168
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E GY +VGR KDMIIRGGENIYP+E+EEF THP V + GVP + GEE+
Sbjct: 103 DLAMMDEHGYVCIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEI 162
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++L + + +R + + +++ F
Sbjct: 163 VAWVRLHPGHTASEEALREWARARIAHF 190
>gi|423132663|ref|ZP_17120310.1| hypothetical protein HMPREF9715_00085 [Myroides odoratimimus CIP
101113]
gi|423328274|ref|ZP_17306081.1| hypothetical protein HMPREF9711_01655 [Myroides odoratimimus CCUG
3837]
gi|371650040|gb|EHO15514.1| hypothetical protein HMPREF9715_00085 [Myroides odoratimimus CIP
101113]
gi|404605177|gb|EKB04790.1| hypothetical protein HMPREF9711_01655 [Myroides odoratimimus CCUG
3837]
Length = 537
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 81/173 (46%), Gaps = 38/173 (21%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K++D RIVP G GEL RG+ ML YW + T E + +RW+ TG
Sbjct: 362 LEIKIIDPETGRIVPRGEAGELCTRGYSVMLKYWNNRTLTSEVLDENRWMHTG------- 414
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + + GY + GRIKD+IIRGGENI P
Sbjct: 415 ------------------------------DLATMDDQGYISITGRIKDLIIRGGENISP 444
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
K IE+F+ THP++ + GVPDE+ GEE+ + LK L E K ++
Sbjct: 445 KWIEDFLYTHPSIADVQVIGVPDEKYGEEIMAWVILKPGITLTGEELKGFCTE 497
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%)
Query: 392 RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDE 451
R + D + + GY + GRIKD+IIRGGENI PK IE+F+ THP++ + GVPDE
Sbjct: 409 RWMHTGDLATMDDQGYISITGRIKDLIIRGGENISPKWIEDFLYTHPSIADVQVIGVPDE 468
Query: 452 RMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ GEE+ + LK L ++++ FC K++ F
Sbjct: 469 KYGEEIMAWVILKPGITLTGEELKGFCTEKIAHF 502
>gi|398906734|ref|ZP_10653576.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM50]
gi|398172501|gb|EJM60362.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM50]
Length = 565
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 81/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D +VP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDEAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGEN+YP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENVYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY + GR KDMIIRGGEN+YP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNDEGYVCIAGRNKDMIIRGGENVYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK +++ +CK +++ F
Sbjct: 500 VAWIKFHPGHSATEQELQAWCKERIAHF 527
>gi|222528795|ref|YP_002572677.1| AMP-dependent synthetase and ligase [Caldicellulosiruptor bescii
DSM 6725]
gi|222455642|gb|ACM59904.1| AMP-dependent synthetase and ligase [Caldicellulosiruptor bescii
DSM 6725]
Length = 553
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 87/176 (49%), Gaps = 40/176 (22%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + + ST+ + K+VD H + VP G GE+ RG+ M GY++ + TK+ I
Sbjct: 353 DPLEFRVSTVGKPLEGVEVKIVDIHTKKEVPNGVIGEICARGYNVMKGYYKMPEATKQAI 412
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D + ++GY ++
Sbjct: 413 DEDGWLHTG-------------------------------------DLGYIDQNGYLRIT 435
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
GR+KDMIIRGGENIYP+EIEEF+ THP V + GVPD+ GEE+ I LK+
Sbjct: 436 GRLKDMIIRGGENIYPREIEEFLYTHPAVKDVQVVGVPDKVYGEEIAAFIILKDGC 491
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 58/83 (69%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ ++GY ++ GR+KDMIIRGGENIYP+EIEEF+ THP V + GVPD+ GEE+ I
Sbjct: 426 IDQNGYLRITGRLKDMIIRGGENIYPREIEEFLYTHPAVKDVQVVGVPDKVYGEEIAAFI 485
Query: 462 KLKENAKLNADDIRTFCKGKVSK 484
LK+ + ++I+ F K +S+
Sbjct: 486 ILKDGCYASEEEIKEFVKANLSR 508
>gi|407364067|ref|ZP_11110599.1| AMP-binding domain protein [Pseudomonas mandelii JR-1]
Length = 565
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 81/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D +VP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGEN+YP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENVYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY + GR KDMIIRGGEN+YP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNDEGYVCIAGRNKDMIIRGGENVYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK +++ +CK +++ F
Sbjct: 500 VAWIKFHPGHSATEQELQAWCKERIAHF 527
>gi|312794091|ref|YP_004027014.1| amp-dependent synthetase and ligase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181231|gb|ADQ41401.1| AMP-dependent synthetase and ligase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 553
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 87/174 (50%), Gaps = 40/174 (22%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + + ST+ + K+VD H + VP G GE+ RG+ M GY++ + TK+ I
Sbjct: 353 DPLEFRVSTVGKPLEGVEVKIVDIHTKKEVPNGVVGEICARGYNVMKGYYKMPEATKQAI 412
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D + ++GY ++
Sbjct: 413 DEDGWLHTG-------------------------------------DLGYIDQNGYLRIT 435
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 175
GR+KDMIIRGGENIYP+EIEEF+ THP V + GVPD+ GEE+ I LK+
Sbjct: 436 GRLKDMIIRGGENIYPREIEEFLYTHPAVKDVQVVGVPDKVYGEEIAAFIILKD 489
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 57/83 (68%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ ++GY ++ GR+KDMIIRGGENIYP+EIEEF+ THP V + GVPD+ GEE+ I
Sbjct: 426 IDQNGYLRITGRLKDMIIRGGENIYPREIEEFLYTHPAVKDVQVVGVPDKVYGEEIAAFI 485
Query: 462 KLKENAKLNADDIRTFCKGKVSK 484
LK+ D+I+ F + +S+
Sbjct: 486 ILKDGYTATEDEIKEFVRTNLSR 508
>gi|221213085|ref|ZP_03586061.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD1]
gi|221167298|gb|EED99768.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD1]
Length = 564
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 82/169 (48%), Gaps = 38/169 (22%)
Query: 19 FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD + R V G GEL RG+ M GYW DE++T+E I D W+ TG
Sbjct: 383 LEIKLVDPDTGRTVDIGETGELCTRGYSVMNGYWNDEKRTREAIDEDEWMHTG------- 435
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + GY +VGRIKDM+IRGGEN+YP
Sbjct: 436 ------------------------------DLATMDAKGYVNIVGRIKDMVIRGGENVYP 465
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
+EIEEF+ HP + + GVPD + GEE+ + L+ + L E ++
Sbjct: 466 REIEEFLYGHPAIRDVQVVGVPDPKYGEELCAWVVLRPDHTLTEEELRA 514
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + GY +VGRIKDM+IRGGEN+YP+EIEEF+ HP + + GVPD + GEE+
Sbjct: 436 DLATMDAKGYVNIVGRIKDMVIRGGENVYPREIEEFLYGHPAIRDVQVVGVPDPKYGEEL 495
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ L+ + L +++R CKG+++ +
Sbjct: 496 CAWVVLRPDHTLTEEELRAHCKGQIAHY 523
>gi|388468862|ref|ZP_10143072.1| long-chain-fatty-acid--CoA ligase Acs [Pseudomonas synxantha BG33R]
gi|388012442|gb|EIK73629.1| long-chain-fatty-acid--CoA ligase Acs [Pseudomonas synxantha BG33R]
Length = 545
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 77/172 (44%), Gaps = 37/172 (21%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ ++VD V G GEL RG+ MLGYW + T+E I W+ TG
Sbjct: 368 LETRIVDDAGNTVARGVIGELCTRGYSVMLGYWNNPDGTREAIDEAGWMHTG-------- 419
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E GY + GR KDMIIRGGEN+YP+
Sbjct: 420 -----------------------------DLATMDEHGYVCIAGRNKDMIIRGGENVYPR 450
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
E+EEF THP V + G+PDER GEE+ IK NA E ++ D
Sbjct: 451 ELEEFFFTHPAVADVQIIGIPDERYGEEIVAWIKFHPGQVANALELQTWCKD 502
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY + GR KDMIIRGGEN+YP+E+EEF THP V + G+PDER GEE+
Sbjct: 420 DLATMDEHGYVCIAGRNKDMIIRGGENVYPRELEEFFFTHPAVADVQIIGIPDERYGEEI 479
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK NA +++T+CK +++ F
Sbjct: 480 VAWIKFHPGQVANALELQTWCKDRIAYF 507
>gi|384159161|ref|YP_005541234.1| AMP-binding protein [Bacillus amyloliquefaciens TA208]
gi|384164411|ref|YP_005545790.1| AMP-binding domain protein,fatty-acyl-CoA synthase [Bacillus
amyloliquefaciens LL3]
gi|384168205|ref|YP_005549583.1| AMP-binding protein [Bacillus amyloliquefaciens XH7]
gi|328553249|gb|AEB23741.1| AMP-binding domain protein [Bacillus amyloliquefaciens TA208]
gi|328911966|gb|AEB63562.1| AMP-binding domain protein,fatty-acyl-CoA synthase [Bacillus
amyloliquefaciens LL3]
gi|341827484|gb|AEK88735.1| AMP-binding domain protein [Bacillus amyloliquefaciens XH7]
Length = 546
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V + GVPD + GEE
Sbjct: 423 DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDPKYGEEA 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ +A+DIRTFCK ++++
Sbjct: 483 AAWIRLKDGQTASAEDIRTFCKENIARY 510
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 78/157 (49%), Gaps = 37/157 (23%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY+++++ T+E I D WL TG
Sbjct: 386 GEQGELCTRGYHVMKGYYKNQEATEEAIDKDGWLHTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V +
Sbjct: 423 --------------DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
GVPD + GEE I+LK+ +A + ++ +
Sbjct: 469 QVVGVPDPKYGEEAAAWIRLKDGQTASAEDIRTFCKE 505
>gi|344996579|ref|YP_004798922.1| AMP-dependent synthetase and ligase [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964798|gb|AEM73945.1| AMP-dependent synthetase and ligase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 553
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 87/174 (50%), Gaps = 40/174 (22%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + + ST+ + K+VD H + VP G GE+ RG+ M GY++ + TK+ I
Sbjct: 353 DPLEFRVSTVGKPLEGVEVKIVDIHTKKEVPNGVVGEICARGYNVMKGYYKMPEATKQAI 412
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D + ++GY ++
Sbjct: 413 DEDGWLHTG-------------------------------------DLGYIDQNGYLRIT 435
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 175
GR+KDMIIRGGENIYP+EIEEF+ THP V + GVPD+ GEE+ I LK+
Sbjct: 436 GRLKDMIIRGGENIYPREIEEFLYTHPAVKDVQVVGVPDKVYGEEIAAFIILKD 489
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 57/83 (68%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ ++GY ++ GR+KDMIIRGGENIYP+EIEEF+ THP V + GVPD+ GEE+ I
Sbjct: 426 IDQNGYLRITGRLKDMIIRGGENIYPREIEEFLYTHPAVKDVQVVGVPDKVYGEEIAAFI 485
Query: 462 KLKENAKLNADDIRTFCKGKVSK 484
LK+ D+I+ F + +S+
Sbjct: 486 ILKDGYTATEDEIKEFVRTNLSR 508
>gi|145488402|ref|XP_001430205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397301|emb|CAK62807.1| unnamed protein product [Paramecium tetraurelia]
Length = 572
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 37/161 (22%)
Query: 18 SFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ + K++D + +VP+ TPGE RG+ M GYW DE+ TK TI + +L +G
Sbjct: 386 NMEVKIIDSDGMVVPYDTPGEYCSRGYGIMKGYWGDEKATKNTIDVNGFLHSG------- 438
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + ++GY +VGRIKDMIIRGGENIYP
Sbjct: 439 ------------------------------DVATMDKNGYVAIVGRIKDMIIRGGENIYP 468
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
KEIE+++ V + G DE+ GEEV IK+K++A+
Sbjct: 469 KEIEDYLSHMKGVEQVQVVGCFDEKYGEEVVALIKMKKDAE 509
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY +VGRIKDMIIRGGENIYPKEIE+++ V + G DE+ GEEV
Sbjct: 439 DVATMDKNGYVAIVGRIKDMIIRGGENIYPKEIEDYLSHMKGVEQVQVVGCFDEKYGEEV 498
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
IK+K++A +L D+ FC K++ +
Sbjct: 499 VALIKMKKDAEELTGLDVYQFCHKKIAHY 527
>gi|259489124|tpe|CBF89137.1| TPA: acyl CoA synthetase (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 593
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 79/163 (48%), Gaps = 41/163 (25%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR----WLRTGRYKKT 75
+AK++D N IVP GT GEL + G+ GYW + +KT ET+ D WL+TG
Sbjct: 401 KAKIIDANGAIVPVGTRGELCMAGYQLTKGYWNNPEKTAETLVTDEEGTVWLKTG----- 455
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
D+ V +GY + GR KD+IIRGGENI
Sbjct: 456 --------------------------------DEAVFTPEGYCTITGRFKDIIIRGGENI 483
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
YP EIEE + HP++ + G+ D + GE VG I L E AK
Sbjct: 484 YPLEIEERLTAHPSISLSSVIGIQDSKYGEVVGAFIALAEGAK 526
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ V +GY + GR KD+IIRGGENIYP EIEE + HP++ + G+ D + GE V
Sbjct: 456 DEAVFTPEGYCTITGRFKDIIIRGGENIYPLEIEERLTAHPSISLSSVIGIQDSKYGEVV 515
Query: 458 GISIKLKENAKLNADD 473
G I L E AK +DD
Sbjct: 516 GAFIALAEGAKRPSDD 531
>gi|452855793|ref|YP_007497476.1| putative acyl-CoA synthetase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452080053|emb|CCP21814.1| putative acyl-CoA synthetase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 546
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V + GVPD + GEE
Sbjct: 423 DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDPKYGEEA 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ +A+DIRTFCK ++++
Sbjct: 483 AAWIRLKDGQTASAEDIRTFCKEHIARY 510
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 79/158 (50%), Gaps = 37/158 (23%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY+++++ T+E I D WL TG
Sbjct: 386 GEQGELCTRGYHVMKGYYKNQEATEEAIDKDGWLHTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V +
Sbjct: 423 --------------DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDY 191
GVPD + GEE I+LK+ +A + ++ ++
Sbjct: 469 QVVGVPDPKYGEEAAAWIRLKDGQTASAEDIRTFCKEH 506
>gi|67538204|ref|XP_662876.1| hypothetical protein AN5272.2 [Aspergillus nidulans FGSC A4]
gi|40743242|gb|EAA62432.1| hypothetical protein AN5272.2 [Aspergillus nidulans FGSC A4]
gi|259485295|tpe|CBF82198.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 574
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 82/162 (50%), Gaps = 41/162 (25%)
Query: 21 AKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR----WLRTGRYKKTS 76
AKVVD +IVP G GEL + G+ GYW++E+KT+E + D W+ TG
Sbjct: 384 AKVVDKQGKIVPQGQRGELCVGGYALQKGYWKNEEKTREVMKYDANGMLWMHTG------ 437
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
D+ ++ E GYG + GRIKD+IIRGGENI+
Sbjct: 438 -------------------------------DEVMIDEGGYGHITGRIKDLIIRGGENIF 466
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
P+EIE+ + H ++ EA G+ DE+ GE VG +KL +
Sbjct: 467 PREIEDRLVAHDSITEASVVGIKDEKYGEVVGCFLKLTPGCQ 508
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ ++ E GYG + GRIKD+IIRGGENI+P+EIE+ + H ++ EA G+ DE+ GE V
Sbjct: 438 DEVMIDEGGYGHITGRIKDLIIRGGENIFPREIEDRLVAHDSITEASVVGIKDEKYGEVV 497
Query: 458 GISIKLKENAK 468
G +KL +
Sbjct: 498 GCFLKLTPGCQ 508
>gi|116671612|ref|YP_832545.1| AMP-dependent synthetase and ligase [Arthrobacter sp. FB24]
gi|116611721|gb|ABK04445.1| AMP-dependent synthetase and ligase [Arthrobacter sp. FB24]
Length = 558
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 83/177 (46%), Gaps = 44/177 (24%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+++VVD ++ G GEL RG+ M GYW KT E I PD W+ TG +
Sbjct: 382 LESQVVDPATGEVLERGEIGELCTRGYAVMKGYWNQPDKTAEAIDPDGWMHTGDLAR--- 438
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
+ DGY + GRIKDM+IRGGENIYP
Sbjct: 439 ----------------------------------MDADGYVVIEGRIKDMVIRGGENIYP 464
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDYHEF 194
+EIEEF+ THP++ + GVPD + GEE+ I +K A D ++D EF
Sbjct: 465 REIEEFLYTHPSIQDVQVIGVPDAKYGEELMACIIVKPGA------DPLDAADVAEF 515
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY + GRIKDM+IRGGENIYP+EIEEF+ THP++ + GVPD + GEE+ I +K
Sbjct: 442 DGYVVIEGRIKDMVIRGGENIYPREIEEFLYTHPSIQDVQVIGVPDAKYGEELMACIIVK 501
Query: 465 ENA-KLNADDIRTFCKGKVSKF 485
A L+A D+ FC+GK++ +
Sbjct: 502 PGADPLDAADVAEFCRGKLAHY 523
>gi|429505407|ref|YP_007186591.1| AMP-binding protein [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|429486997|gb|AFZ90921.1| AMP-binding domain protein [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 546
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V + GVPD + GEE
Sbjct: 423 DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDPKYGEEA 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ +A+DIRTFCK ++++
Sbjct: 483 AAWIRLKDGQTASAEDIRTFCKEHIARY 510
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 79/158 (50%), Gaps = 37/158 (23%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY+++++ T+E I D WL TG
Sbjct: 386 GEQGELCTRGYHVMKGYYKNQEATEEAIDKDGWLHTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V +
Sbjct: 423 --------------DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDY 191
GVPD + GEE I+LK+ +A + ++ ++
Sbjct: 469 QVVGVPDPKYGEEAAAWIRLKDGQTASAEDIRTFCKEH 506
>gi|308173824|ref|YP_003920529.1| short-chain acyl-CoA synthetase [Bacillus amyloliquefaciens DSM 7]
gi|307606688|emb|CBI43059.1| short-chain acyl-CoA synthetase [Bacillus amyloliquefaciens DSM 7]
Length = 449
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V + GVPD + GEE
Sbjct: 326 DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDPKYGEEA 385
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ +A+DIRTFCK ++++
Sbjct: 386 AAWIRLKDGQTASAEDIRTFCKENIARY 413
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 78/157 (49%), Gaps = 37/157 (23%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY+++++ T+E I D WL TG
Sbjct: 289 GEQGELCTRGYHVMKGYYKNQEATEEAIDKDGWLHTG----------------------- 325
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V +
Sbjct: 326 --------------DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 371
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
GVPD + GEE I+LK+ +A + ++ +
Sbjct: 372 QVVGVPDPKYGEEAAAWIRLKDGQTASAEDIRTFCKE 408
>gi|373109327|ref|ZP_09523606.1| hypothetical protein HMPREF9712_01199 [Myroides odoratimimus CCUG
10230]
gi|371645325|gb|EHO10851.1| hypothetical protein HMPREF9712_01199 [Myroides odoratimimus CCUG
10230]
Length = 537
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 81/173 (46%), Gaps = 38/173 (21%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K++D RIVP G GEL RG+ ML YW + T E + +RW+ TG
Sbjct: 362 LEIKIIDPETGRIVPRGEAGELCTRGYSVMLKYWNNRTLTSEVLDENRWMHTG------- 414
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + + GY + GRIKD+IIRGGENI P
Sbjct: 415 ------------------------------DLATMDDQGYISITGRIKDLIIRGGENISP 444
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
K IE+F+ THP++ + GVPDE+ GEE+ + LK L E K ++
Sbjct: 445 KWIEDFLYTHPSIADVQVIGVPDEKYGEEIMAWVILKPGITLTGDELKGFCTE 497
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 392 RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDE 451
R + D + + GY + GRIKD+IIRGGENI PK IE+F+ THP++ + GVPDE
Sbjct: 409 RWMHTGDLATMDDQGYISITGRIKDLIIRGGENISPKWIEDFLYTHPSIADVQVIGVPDE 468
Query: 452 RMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ GEE+ + LK L D+++ FC K++ F
Sbjct: 469 KYGEEIMAWVILKPGITLTGDELKGFCTEKIAHF 502
>gi|330509006|ref|YP_004385434.1| AMP-dependent synthetase and ligase [Methanosaeta concilii GP6]
gi|328929814|gb|AEB69616.1| AMP-dependent synthetase and ligase [Methanosaeta concilii GP6]
Length = 569
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L E+ Y ++ GR+KDM+IRGGENIYP+EIEEF+ THP + + GVPD++ GEE+
Sbjct: 438 DLGTLDENDYCKITGRLKDMVIRGGENIYPREIEEFLYTHPAISDVQVIGVPDKKYGEEL 497
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKLK A N ++I+ FCKG+++ F
Sbjct: 498 MAWIKLKNGASANQEEIKAFCKGRIAHF 525
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 89/184 (48%), Gaps = 40/184 (21%)
Query: 8 DLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPD 64
DL+ ST+ + K+VD +IVP G GE+ RG+ M Y+ + T++ I +
Sbjct: 372 DLRVSTVGKPMPHTEMKIVDPKTGKIVPRGETGEICARGYMIMREYYNNPVATEQCIDEE 431
Query: 65 RWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRI 124
WL TG D L E+ Y ++ GR+
Sbjct: 432 GWLHTG-------------------------------------DLGTLDENDYCKITGRL 454
Query: 125 KDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
KDM+IRGGENIYP+EIEEF+ THP + + GVPD++ GEE+ IKLK A N E
Sbjct: 455 KDMVIRGGENIYPREIEEFLYTHPAISDVQVIGVPDKKYGEELMAWIKLKNGASANQEEI 514
Query: 185 KSIS 188
K+
Sbjct: 515 KAFC 518
>gi|394994435|ref|ZP_10387152.1| AMP-binding domain protein [Bacillus sp. 916]
gi|393804698|gb|EJD66100.1| AMP-binding domain protein [Bacillus sp. 916]
Length = 546
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V + GVPD + GEE
Sbjct: 423 DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDPKYGEEA 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ +A+DIRTFCK ++++
Sbjct: 483 AAWIRLKDGQTASAEDIRTFCKEHIARY 510
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 79/158 (50%), Gaps = 37/158 (23%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY+++++ T+E I D WL TG
Sbjct: 386 GEQGELCTRGYHVMKGYYKNQEATEEAIDKDGWLHTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V +
Sbjct: 423 --------------DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDY 191
GVPD + GEE I+LK+ +A + ++ ++
Sbjct: 469 QVVGVPDPKYGEEAAAWIRLKDGQTASAEDIRTFCKEH 506
>gi|389646485|ref|XP_003720874.1| short-chain-fatty-acid-CoA ligase [Magnaporthe oryzae 70-15]
gi|86196574|gb|EAQ71212.1| hypothetical protein MGCH7_ch7g619 [Magnaporthe oryzae 70-15]
gi|351638266|gb|EHA46131.1| short-chain-fatty-acid-CoA ligase [Magnaporthe oryzae 70-15]
gi|440473638|gb|ELQ42423.1| short-chain-fatty-acid-CoA ligase [Magnaporthe oryzae Y34]
gi|440482421|gb|ELQ62913.1| short-chain-fatty-acid-CoA ligase [Magnaporthe oryzae P131]
Length = 695
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 7/149 (4%)
Query: 22 KVVDHNNR--IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
K+V +R IVP G GE+ G+ M GYW DE +TKE DR
Sbjct: 458 KIVQPGDRTKIVPIGEKGEIATSGYLIMQGYWGDENRTKE----DRLWAADDDDGLGAAV 513
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
+ I + + P ++Q ++ G + D+ V+ +DGY V GRIKD+IIRGGENI+P E
Sbjct: 514 EPLGIGKTV-PESEEQARRNGRVWMFSGDEGVMDKDGYVAVTGRIKDLIIRGGENIHPLE 572
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVG 168
IE + HP V EA GV DER GE VG
Sbjct: 573 IENCLFQHPLVAEASVVGVSDERYGEVVG 601
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 57/95 (60%), Gaps = 7/95 (7%)
Query: 385 TVPDSA------GRS-IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTH 437
TVP+S GR +F D+ V+ +DGY V GRIKD+IIRGGENI+P EIE + H
Sbjct: 521 TVPESEEQARRNGRVWMFSGDEGVMDKDGYVAVTGRIKDLIIRGGENIHPLEIENCLFQH 580
Query: 438 PNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAD 472
P V EA GV DER GE VG + + K+ D
Sbjct: 581 PLVAEASVVGVSDERYGEVVGAFVVPHKGVKVVED 615
>gi|317126641|ref|YP_004100753.1| AMP-dependent synthetase and ligase [Intrasporangium calvum DSM
43043]
gi|315590729|gb|ADU50026.1| AMP-dependent synthetase and ligase [Intrasporangium calvum DSM
43043]
Length = 502
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 79/159 (49%), Gaps = 38/159 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ K+V+ + G GE+ IRG M GYW + T E I PD W RTG
Sbjct: 336 EMKLVNLDGTDTAPGEIGEIAIRGENVMKGYWGKPEATAEAI-PDGWFRTG--------- 385
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + EDGY +V R KDMIIRGG N+YP+E
Sbjct: 386 ----------------------------DLATVDEDGYFTIVDRKKDMIIRGGMNVYPRE 417
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EE + THP+VLEA G+PD+ MGEE+G ++ LK ++
Sbjct: 418 VEEVLYTHPDVLEAAVVGIPDDVMGEEIGAAVALKPGSE 456
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDGY +V R KDMIIRGG N+YP+E+EE + THP+VLEA G+PD+ MGEE+
Sbjct: 386 DLATVDEDGYFTIVDRKKDMIIRGGMNVYPREVEEVLYTHPDVLEAAVVGIPDDVMGEEI 445
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
G ++ LK ++ D+++ + K +++ +
Sbjct: 446 GAAVALKPGSETTLDEVQEYVKERIAAY 473
>gi|390337056|ref|XP_796724.3| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 794
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY + GRIKD++IRGGENIYP EIE+F+ HP + + GVPDERMGEE+
Sbjct: 672 DIATMNEEGYITMAGRIKDLVIRGGENIYPTEIEQFLYKHPKIEDVQVIGVPDERMGEEL 731
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK + ++I++FCKGK+S F
Sbjct: 732 CAWIRLKAGQEATPEEIKSFCKGKISHF 759
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 61/91 (67%)
Query: 395 FEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMG 454
+ D + E+GY + GRIKD++IRGGENIYP EIE+F+ HP + + GVPDERMG
Sbjct: 443 LKNDIATMNEEGYITMAGRIKDLVIRGGENIYPTEIEQFLYKHPKIEDVQVIGVPDERMG 502
Query: 455 EEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
EE+ I+LK + ++I+ FCKGK+ +
Sbjct: 503 EELCAWIRLKAGQEATPEEIKAFCKGKLDPY 533
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%)
Query: 108 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
D + E+GY + GRIKD++IRGGENIYP EIE+F+ HP + + GVPDERMGEE+
Sbjct: 672 DIATMNEEGYITMAGRIKDLVIRGGENIYPTEIEQFLYKHPKIEDVQVIGVPDERMGEEL 731
Query: 168 GISIKLKENAKLNAYEDKSIS 188
I+LK + E KS
Sbjct: 732 CAWIRLKAGQEATPEEIKSFC 752
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%)
Query: 105 LVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMG 164
L +D + E+GY + GRIKD++IRGGENIYP EIE+F+ HP + + GVPDERMG
Sbjct: 443 LKNDIATMNEEGYITMAGRIKDLVIRGGENIYPTEIEQFLYKHPKIEDVQVIGVPDERMG 502
Query: 165 EEVGISIKLKENAKLNAYEDKSIS 188
EE+ I+LK + E K+
Sbjct: 503 EELCAWIRLKAGQEATPEEIKAFC 526
>gi|398961392|ref|ZP_10678700.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM30]
gi|398152596|gb|EJM41112.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM30]
Length = 565
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 80/168 (47%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D VP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNPVPRGTIGELCTRGYSVMLGYWSNPQATAEAIDEAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVNIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNDEGYVNIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK + +++T+CK +++ F
Sbjct: 500 VAWIKFHPGHTASELELQTWCKERIAHF 527
>gi|260577833|ref|ZP_05845767.1| long-chain-fatty-acid--CoA ligase [Corynebacterium jeikeium ATCC
43734]
gi|258604060|gb|EEW17303.1| long-chain-fatty-acid--CoA ligase [Corynebacterium jeikeium ATCC
43734]
Length = 564
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 81/161 (50%), Gaps = 38/161 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD V G GE+LIRG M GYW+ KT + I D W+ +G
Sbjct: 385 IEVKIVDPETGETVKRGEQGEILIRGFLVMQGYWDMPGKTADAIDEDGWMHSG------- 437
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + E+GY ++ GR KDM+IRGGEN+YP
Sbjct: 438 ------------------------------DLGTMDEEGYARITGRAKDMVIRGGENLYP 467
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++ + GVPDE+ GEE+ I ++E+A+
Sbjct: 468 REIEEFLMTHPDISDVQVVGVPDEKYGEELMAFIIMREDAE 508
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY ++ GR KDM+IRGGEN+YP+EIEEF+ THP++ + GVPDE+ GEE+
Sbjct: 438 DLGTMDEEGYARITGRAKDMVIRGGENLYPREIEEFLMTHPDISDVQVVGVPDEKYGEEL 497
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSK 484
I ++E+A+ L+ +R FC G +++
Sbjct: 498 MAFIIMREDAEPLDQAAVREFCAGDLTR 525
>gi|421731485|ref|ZP_16170608.1| AMP-binding domain protein [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|407073698|gb|EKE46688.1| AMP-binding domain protein [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 546
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V + GVPD + GEE
Sbjct: 423 DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDPKYGEEA 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++LK+ +A+DIRTFCK ++++
Sbjct: 483 AAWVRLKDGQTASAEDIRTFCKEHIARY 510
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 37/158 (23%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY+++++ T+E I D WL TG
Sbjct: 386 GEQGELCTRGYHVMKGYYKNQEATEEAIDKDGWLHTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V +
Sbjct: 423 --------------DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDY 191
GVPD + GEE ++LK+ +A + ++ ++
Sbjct: 469 QVVGVPDPKYGEEAAAWVRLKDGQTASAEDIRTFCKEH 506
>gi|385264992|ref|ZP_10043079.1| short-chain acyl-CoA synthetase [Bacillus sp. 5B6]
gi|385149488|gb|EIF13425.1| short-chain acyl-CoA synthetase [Bacillus sp. 5B6]
Length = 546
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V + GVPD + GEE
Sbjct: 423 DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDPKYGEEA 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++LK+ +A+DIRTFCK ++++
Sbjct: 483 AAWVRLKDGQTASAEDIRTFCKEHIARY 510
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 37/158 (23%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY+++++ T+E I D WL TG
Sbjct: 386 GEQGELCTRGYHVMKGYYKNQEATEEAIDKDGWLHTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V +
Sbjct: 423 --------------DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDY 191
GVPD + GEE ++LK+ +A + ++ ++
Sbjct: 469 QVVGVPDPKYGEEAAAWVRLKDGQTASAEDIRTFCKEH 506
>gi|157692555|ref|YP_001487017.1| long-chain-fatty-acid--CoA ligase [Bacillus pumilus SAFR-032]
gi|157681313|gb|ABV62457.1| long-chain-fatty-acid--CoA ligase [Bacillus pumilus SAFR-032]
Length = 545
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 73/143 (51%), Gaps = 37/143 (25%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY+++E+ T E I D WL TG
Sbjct: 386 GEQGELCTRGYHVMKGYYKNEEATNEVIDEDGWLHTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D + EDGY ++ GR+KDMIIRGGEN+YPKEIE+ + THP +L+A
Sbjct: 423 --------------DLAEMDEDGYVKITGRLKDMIIRGGENVYPKEIEDVLYTHPAILDA 468
Query: 154 YAYGVPDERMGEEVGISIKLKEN 176
G+PDE GEE I+LK+
Sbjct: 469 QVVGIPDETYGEEAAAFIRLKQG 491
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
Query: 369 ARIYHYKK--YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIY 426
R YH K Y EE V D G + D + EDGY ++ GR+KDMIIRGGEN+Y
Sbjct: 393 TRGYHVMKGYYKNEEATNEVIDEDGW-LHTGDLAEMDEDGYVKITGRLKDMIIRGGENVY 451
Query: 427 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
PKEIE+ + THP +L+A G+PDE GEE I+LK+ + + + ++C+ +++++
Sbjct: 452 PKEIEDVLYTHPAILDAQVVGIPDETYGEEAAAFIRLKQGHTVTIETLTSYCQSQMARY 510
>gi|154686271|ref|YP_001421432.1| AMP-binding protein [Bacillus amyloliquefaciens FZB42]
gi|42491132|emb|CAE11269.1| YngI protein [Bacillus amyloliquefaciens FZB42]
gi|154352122|gb|ABS74201.1| YngI [Bacillus amyloliquefaciens FZB42]
Length = 546
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V + GVPD + GEE
Sbjct: 423 DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDPKYGEEA 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++LK+ +A+DIRTFCK ++++
Sbjct: 483 AAWVRLKDGQTASAEDIRTFCKEHIARY 510
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 37/158 (23%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY+++++ T+E I D WL TG
Sbjct: 386 GEQGELCTRGYHVMKGYYKNQEATEEAIDKDGWLHTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V +
Sbjct: 423 --------------DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDY 191
GVPD + GEE ++LK+ +A + ++ ++
Sbjct: 469 QVVGVPDPKYGEEAAAWVRLKDGQTASAEDIRTFCKEH 506
>gi|145300244|ref|YP_001143085.1| AMP-binding domain protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142853016|gb|ABO91337.1| AMP-binding family protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 541
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 39/186 (20%)
Query: 6 PTDLQFSTLSSS--SFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGP 63
P D + +T+ + + K++D + +VP G GE+ R M GYW+D KT ETI
Sbjct: 374 PLDKRVTTVGRALDHTEIKLIDPSGELVPIGERGEICCRSKGVMQGYWQDPVKTAETIDD 433
Query: 64 DRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGR 123
+ WL +G D ++ E+GY Q+VGR
Sbjct: 434 EGWLHSG-------------------------------------DIGIMDEEGYVQIVGR 456
Query: 124 IKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
K++IIRGGENIYP+EIE+ + HP V +A +GV ER GEEV +KL+ + ++ E
Sbjct: 457 SKELIIRGGENIYPREIEDRLYDHPAVQDAAVFGVDSERYGEEVCAWVKLRPDQMVSEEE 516
Query: 184 DKSISS 189
K S
Sbjct: 517 IKHFLS 522
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E+GY Q+VGR K++IIRGGENIYP+EIE+ + HP V +A +GV ER GEEV
Sbjct: 441 DIGIMDEEGYVQIVGRSKELIIRGGENIYPREIEDRLYDHPAVQDAAVFGVDSERYGEEV 500
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+KL+ + ++ ++I+ F +++ F
Sbjct: 501 CAWVKLRPDQMVSEEEIKHFLSARIAYF 528
>gi|405372113|ref|ZP_11027377.1| Acetoacetyl-CoA synthetase/ Long-chain-fatty-acid--CoA ligase
[Chondromyces apiculatus DSM 436]
gi|397088486|gb|EJJ19467.1| Acetoacetyl-CoA synthetase/ Long-chain-fatty-acid--CoA ligase
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 549
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 83/178 (46%), Gaps = 40/178 (22%)
Query: 6 PTDLQFSTLSS--SSFQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
P D + ST+ + K+VD +VP G PGEL RG+ MLGYW + + T +
Sbjct: 350 PLDKRVSTVGRVHPHLEVKIVDAGTGEVVPRGAPGELCTRGYSVMLGYWANPEATAAAVD 409
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ TG D V+ +GY +VVG
Sbjct: 410 AAGWMHTG-------------------------------------DLAVMDAEGYVKVVG 432
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
RIKD IIRGGENI P+E+EEF+ THP V E GVP ++ GEEV ++ K L
Sbjct: 433 RIKDTIIRGGENISPREVEEFLHTHPGVSETQVIGVPSKKYGEEVMAWVRGKPGVTLT 490
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +GY +VVGRIKD IIRGGENI P+E+EEF+ THP V E GVP ++ GEEV
Sbjct: 418 DLAVMDAEGYVKVVGRIKDTIIRGGENISPREVEEFLHTHPGVSETQVIGVPSKKYGEEV 477
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++ K L D + FC G+++ F
Sbjct: 478 MAWVRGKPGVTLTPDALTAFCTGRIASF 505
>gi|375362485|ref|YP_005130524.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|371568479|emb|CCF05329.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
Length = 546
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V + GVPD + GEE
Sbjct: 423 DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDPKYGEEA 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++LK+ +A+DIRTFCK ++++
Sbjct: 483 AAWVRLKDGQTASAEDIRTFCKEHIARY 510
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 37/158 (23%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY+++++ T+E I D WL TG
Sbjct: 386 GEQGELCTRGYHVMKGYYKNQEATEEAIDKDGWLHTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V +
Sbjct: 423 --------------DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDY 191
GVPD + GEE ++LK+ +A + ++ ++
Sbjct: 469 QVVGVPDPKYGEEAAAWVRLKDGQTASAEDIRTFCKEH 506
>gi|350635657|gb|EHA24018.1| hypothetical protein ASPNIDRAFT_121695 [Aspergillus niger ATCC
1015]
Length = 545
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 91/189 (48%), Gaps = 45/189 (23%)
Query: 5 NPTDLQFSTLSS--SSFQAKVV--DHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKET 60
+P D + +T+ +AKVV D++N I+P T GEL + G+ M YW D KT E
Sbjct: 339 DPIDKRINTVGRLLPHVEAKVVSLDNHNNILPINTRGELAVSGYLLMKEYWNDPVKTAEV 398
Query: 61 IGPDR----WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDG 116
+ D W+ TG D+ + DG
Sbjct: 399 MIADDDGKVWMHTG-------------------------------------DEASMSPDG 421
Query: 117 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
Y + GR+KD+IIRGGENI+P EIE + T+P V++A A GVPDER GE V + I +E
Sbjct: 422 YITITGRVKDLIIRGGENIHPLEIENCLLTYPGVIDASAVGVPDERYGEAVAVFIIHREP 481
Query: 177 AKLNAYEDK 185
A EDK
Sbjct: 482 ESEAADEDK 490
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ + DGY + GR+KD+IIRGGENI+P EIE + T+P V++A A GVPDER GE V
Sbjct: 413 DEASMSPDGYITITGRVKDLIIRGGENIHPLEIENCLLTYPGVIDASAVGVPDERYGEAV 472
Query: 458 GISI--KLKENAKLNADDIRTFCKGKVS 483
+ I + E+ + D IR + + K+S
Sbjct: 473 AVFIIHREPESEAADEDKIRQWVREKLS 500
>gi|398934088|ref|ZP_10666138.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM48]
gi|398159328|gb|EJM47633.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM48]
Length = 565
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 81/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D +VP GT GEL RG+ MLGYW + + T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPEGTAEAIDQAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK +++ +CK +++ F
Sbjct: 500 VAWIKFHPGHSATEQELQAWCKERIAHF 527
>gi|283780132|ref|YP_003370887.1| AMP-dependent synthetase and ligase [Pirellula staleyi DSM 6068]
gi|283438585|gb|ADB17027.1| AMP-dependent synthetase and ligase [Pirellula staleyi DSM 6068]
Length = 576
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 94/191 (49%), Gaps = 44/191 (23%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P +L+ T+ F+ ++V +N VP G GEL+ RGH M+GY+ + Q T I
Sbjct: 380 DPLELRVETVGRPLPGFEVRIVGPDNLDVPEGEQGELVARGHGVMIGYYANPQATAAAID 439
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
+ WL +G + R+L G+ ++ G
Sbjct: 440 REGWLHSGD------------LARRLP-------------------------TGHYKITG 462
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN-- 180
R+K+M+IRGGENIYP+EIEEF+ THP + + GVPD GEE+ IK K +A+L
Sbjct: 463 RLKEMVIRGGENIYPREIEEFLFTHPAIEQVAVVGVPDSHFGEELCAWIKRKADAQLTED 522
Query: 181 ---AYEDKSIS 188
AY SI+
Sbjct: 523 DVRAYCRGSIA 533
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 58/80 (72%)
Query: 406 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
G+ ++ GR+K+M+IRGGENIYP+EIEEF+ THP + + GVPD GEE+ IK K
Sbjct: 456 GHYKITGRLKEMVIRGGENIYPREIEEFLFTHPAIEQVAVVGVPDSHFGEELCAWIKRKA 515
Query: 466 NAKLNADDIRTFCKGKVSKF 485
+A+L DD+R +C+G ++ +
Sbjct: 516 DAQLTEDDVRAYCRGSIAHY 535
>gi|121607355|ref|YP_995162.1| AMP-dependent synthetase and ligase [Verminephrobacter eiseniae
EF01-2]
gi|121551995|gb|ABM56144.1| AMP-dependent synthetase and ligase [Verminephrobacter eiseniae
EF01-2]
Length = 576
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 78/160 (48%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K++ + + P G GEL +G+ M GYW D Q+T+E + D W+ TG
Sbjct: 400 LEVKIIGEDGKTRPIGQVGELCTKGYAVMQGYWADPQRTREAV-IDGWMHTGDLATI--- 455
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D F GY ++ GR+KDM+IRGGENIYP+
Sbjct: 456 -----------------------------DAF-----GYCRIAGRLKDMLIRGGENIYPR 481
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
EIEEF+ HP V +A +G+P + GEEV I LK A+
Sbjct: 482 EIEEFLYRHPAVSQAQVFGIPSAKYGEEVCAWIVLKPQAQ 521
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 55/80 (68%)
Query: 406 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
GY ++ GR+KDM+IRGGENIYP+EIEEF+ HP V +A +G+P + GEEV I LK
Sbjct: 459 GYCRIAGRLKDMLIRGGENIYPREIEEFLYRHPAVSQAQVFGIPSAKYGEEVCAWIVLKP 518
Query: 466 NAKLNADDIRTFCKGKVSKF 485
A+ + + IR C+ ++ F
Sbjct: 519 QAQASPESIREHCRAHLAHF 538
>gi|399925994|ref|ZP_10783352.1| AMP-dependent synthetase and ligase [Myroides injenensis M09-0166]
Length = 537
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 85/176 (48%), Gaps = 43/176 (24%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K++D RI+P G GEL RG+ ML YW + T E + +RW+ +G
Sbjct: 362 LEIKIIDPETGRILPRGEAGELCTRGYSVMLKYWNNRTLTGEVLDENRWMHSG------- 414
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + E+GY + GRIKD+IIRGGENI P
Sbjct: 415 ------------------------------DLATMDEEGYISITGRIKDLIIRGGENISP 444
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA-----KLNAYEDKSIS 188
K IE+F+ THP+V + GVP E+ GEE+ + LKE A +L Y D+ I+
Sbjct: 445 KWIEDFLYTHPSVADVQVIGVPSEKYGEEIMAWLILKEGATVTEDELRTYCDQKIA 500
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 62/94 (65%)
Query: 392 RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDE 451
R + D + E+GY + GRIKD+IIRGGENI PK IE+F+ THP+V + GVP E
Sbjct: 409 RWMHSGDLATMDEEGYISITGRIKDLIIRGGENISPKWIEDFLYTHPSVADVQVIGVPSE 468
Query: 452 RMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ GEE+ + LKE A + D++RT+C K++ F
Sbjct: 469 KYGEEIMAWLILKEGATVTEDELRTYCDQKIAHF 502
>gi|418357708|ref|ZP_12960398.1| AMP-binding domain protein [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|356688947|gb|EHI53495.1| AMP-binding domain protein [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 535
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 39/186 (20%)
Query: 6 PTDLQFSTLSSS--SFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGP 63
P D + +T+ + + K++D + +VP G GE+ R M GYW+D KT ETI
Sbjct: 368 PLDKRVTTVGRALDHTEIKLIDPSGELVPIGERGEICCRSKGVMQGYWQDPVKTAETIDD 427
Query: 64 DRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGR 123
+ WL +G D ++ E+GY Q+VGR
Sbjct: 428 EGWLHSG-------------------------------------DIGIMDEEGYVQIVGR 450
Query: 124 IKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
K++IIRGGENIYP+EIE+ + HP V +A +GV ER GEEV +KL+ + ++ E
Sbjct: 451 SKELIIRGGENIYPREIEDRLYDHPAVQDAAVFGVDSERYGEEVCAWVKLRPDQMVSEEE 510
Query: 184 DKSISS 189
K S
Sbjct: 511 IKHFLS 516
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E+GY Q+VGR K++IIRGGENIYP+EIE+ + HP V +A +GV ER GEEV
Sbjct: 435 DIGIMDEEGYVQIVGRSKELIIRGGENIYPREIEDRLYDHPAVQDAAVFGVDSERYGEEV 494
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+KL+ + ++ ++I+ F +++ F
Sbjct: 495 CAWVKLRPDQMVSEEEIKHFLSARIAYF 522
>gi|134076081|emb|CAK39440.1| unnamed protein product [Aspergillus niger]
Length = 546
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 91/189 (48%), Gaps = 45/189 (23%)
Query: 5 NPTDLQFSTLSS--SSFQAKVV--DHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKET 60
+P D + +T+ +AKVV D++N I+P T GEL + G+ M YW D KT E
Sbjct: 340 DPIDKRINTVGRLLPHVEAKVVSLDNHNNILPINTRGELAVSGYLLMKEYWNDPVKTAEV 399
Query: 61 IGPDR----WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDG 116
+ D W+ TG D+ + DG
Sbjct: 400 MIADDDGKVWMHTG-------------------------------------DEASMSPDG 422
Query: 117 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
Y + GR+KD+IIRGGENI+P EIE + T+P V++A A GVPDER GE V + I +E
Sbjct: 423 YITITGRVKDLIIRGGENIHPLEIENCLLTYPGVIDASAVGVPDERYGEAVAVFIIHREP 482
Query: 177 AKLNAYEDK 185
A EDK
Sbjct: 483 ESEAADEDK 491
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ + DGY + GR+KD+IIRGGENI+P EIE + T+P V++A A GVPDER GE V
Sbjct: 414 DEASMSPDGYITITGRVKDLIIRGGENIHPLEIENCLLTYPGVIDASAVGVPDERYGEAV 473
Query: 458 GISIKLKENAKLNADD--IRTFCKGKVS 483
+ I +E AD+ IR + + K+S
Sbjct: 474 AVFIIHREPESEAADEDKIRQWVREKLS 501
>gi|147677173|ref|YP_001211388.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[Pelotomaculum thermopropionicum SI]
gi|146273270|dbj|BAF59019.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[Pelotomaculum thermopropionicum SI]
Length = 554
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 85/182 (46%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P D + ST+ + + K+V+ VP G GEL RG+ M GY++ + T I
Sbjct: 354 DPLDYRVSTVGRALPGVEVKIVNPETGEEVPRGVQGELCARGYNIMKGYYKMPEATAAAI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D + E+GY +
Sbjct: 414 DKDGWLHTG-------------------------------------DLATMGENGYCNIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ THP V + GVP + GEEV I+LKE L
Sbjct: 437 GRLKDMIIRGGENIYPREIEEFLYTHPKVKDVQVVGVPSIKYGEEVMAFIQLKEGCTLTQ 496
Query: 182 YE 183
E
Sbjct: 497 EE 498
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY + GR+KDMIIRGGENIYP+EIEEF+ THP V + GVP + GEEV
Sbjct: 423 DLATMGENGYCNITGRLKDMIIRGGENIYPREIEEFLYTHPKVKDVQVVGVPSIKYGEEV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LKE L ++++ FCKGK++ +
Sbjct: 483 MAFIQLKEGCTLTQEEVQEFCKGKIANY 510
>gi|426408677|ref|YP_007028776.1| long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase)
[Pseudomonas sp. UW4]
gi|426266894|gb|AFY18971.1| long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase)
[Pseudomonas sp. UW4]
Length = 565
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 81/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D +VP GT GEL RG+ MLGYW + + T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPEGTAEAIDQAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK +++ +CK +++ F
Sbjct: 500 VAWIKFHPGHSATEQELQAWCKERIAHF 527
>gi|67516655|ref|XP_658213.1| hypothetical protein AN0609.2 [Aspergillus nidulans FGSC A4]
gi|40747552|gb|EAA66708.1| hypothetical protein AN0609.2 [Aspergillus nidulans FGSC A4]
Length = 546
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 79/163 (48%), Gaps = 41/163 (25%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR----WLRTGRYKKT 75
+AK++D N IVP GT GEL + G+ GYW + +KT ET+ D WL+TG
Sbjct: 354 KAKIIDANGAIVPVGTRGELCMAGYQLTKGYWNNPEKTAETLVTDEEGTVWLKTG----- 408
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
D+ V +GY + GR KD+IIRGGENI
Sbjct: 409 --------------------------------DEAVFTPEGYCTITGRFKDIIIRGGENI 436
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
YP EIEE + HP++ + G+ D + GE VG I L E AK
Sbjct: 437 YPLEIEERLTAHPSISLSSVIGIQDSKYGEVVGAFIALAEGAK 479
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ V +GY + GR KD+IIRGGENIYP EIEE + HP++ + G+ D + GE V
Sbjct: 409 DEAVFTPEGYCTITGRFKDIIIRGGENIYPLEIEERLTAHPSISLSSVIGIQDSKYGEVV 468
Query: 458 GISIKLKENAKLNADD 473
G I L E AK +DD
Sbjct: 469 GAFIALAEGAKRPSDD 484
>gi|398959911|ref|ZP_10678305.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM33]
gi|398144648|gb|EJM33470.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM33]
Length = 564
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 81/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D +VP GT GEL RG+ MLGYW + + T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPEGTAEAIDQAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK +++ +CK +++ F
Sbjct: 500 VAWIKFHPGHSATEQELQAWCKERIAHF 527
>gi|317029446|ref|XP_001391604.2| AMP-binding enzyme [Aspergillus niger CBS 513.88]
Length = 613
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 91/189 (48%), Gaps = 45/189 (23%)
Query: 5 NPTDLQFSTLSS--SSFQAKVV--DHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKET 60
+P D + +T+ +AKVV D++N I+P T GEL + G+ M YW D KT E
Sbjct: 407 DPIDKRINTVGRLLPHVEAKVVSLDNHNNILPINTRGELAVSGYLLMKEYWNDPVKTAEV 466
Query: 61 IGPDR----WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDG 116
+ D W+ TG D+ + DG
Sbjct: 467 MIADDDGKVWMHTG-------------------------------------DEASMSPDG 489
Query: 117 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
Y + GR+KD+IIRGGENI+P EIE + T+P V++A A GVPDER GE V + I +E
Sbjct: 490 YITITGRVKDLIIRGGENIHPLEIENCLLTYPGVIDASAVGVPDERYGEAVAVFIIHREP 549
Query: 177 AKLNAYEDK 185
A EDK
Sbjct: 550 ESEAADEDK 558
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ + DGY + GR+KD+IIRGGENI+P EIE + T+P V++A A GVPDER GE V
Sbjct: 481 DEASMSPDGYITITGRVKDLIIRGGENIHPLEIENCLLTYPGVIDASAVGVPDERYGEAV 540
Query: 458 GISI--KLKENAKLNADDIRTFCKGKVS 483
+ I + E+ + D IR + + K+S
Sbjct: 541 AVFIIHREPESEAADEDKIRQWVREKLS 568
>gi|156408191|ref|XP_001641740.1| predicted protein [Nematostella vectensis]
gi|156228880|gb|EDO49677.1| predicted protein [Nematostella vectensis]
Length = 704
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 40/187 (21%)
Query: 6 PTDLQFSTLSSSS--FQAKVVD--HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P DL+ ST+ + + +AK++D H N +VP TPGE+ RG+ M GYW+D +KT I
Sbjct: 422 PVDLRVSTVGTMAPNVEAKIIDSEHGN-VVPINTPGEICFRGYNVMQGYWDDYEKTDAAI 480
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQ-- 119
+ W +G K + P+ + V+ F+++E G+
Sbjct: 481 DSNGWFHSGATPKAP-----------VHPIHLRVS---------VAQVFLMKEGNKGRER 520
Query: 120 ----------VVGRI---KDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEE 166
++ + KD+IIRGGENIYP E+E+F+ HP + + G+PDER+GEE
Sbjct: 521 FCDTLLLWTPMIPSLFIPKDVIIRGGENIYPTEVEQFLYKHPKIQDVQIIGIPDERLGEE 580
Query: 167 VGISIKL 173
V I+L
Sbjct: 581 VCACIRL 587
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 50/71 (70%)
Query: 415 KDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDI 474
KD+IIRGGENIYP E+E+F+ HP + + G+PDER+GEEV I+L + ++I
Sbjct: 539 KDVIIRGGENIYPTEVEQFLYKHPKIQDVQIIGIPDERLGEEVCACIRLHPGESSSPEEI 598
Query: 475 RTFCKGKVSKF 485
+ FCKG+++ F
Sbjct: 599 KEFCKGQIAHF 609
>gi|239918243|ref|YP_002957801.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Micrococcus
luteus NCTC 2665]
gi|281415565|ref|ZP_06247307.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Micrococcus
luteus NCTC 2665]
gi|239839450|gb|ACS31247.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Micrococcus
luteus NCTC 2665]
Length = 592
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 80/159 (50%), Gaps = 38/159 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD +VP G GEL RG+ MLGYW+ +KT E + D W+ +G
Sbjct: 400 VETKIVDPATGDVVPRGATGELCTRGYSVMLGYWDAPEKTAEVLDADGWMHSG------- 452
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + EDG ++ GRIKD++IRGGENI P
Sbjct: 453 ------------------------------DLASMDEDGSVRIEGRIKDLVIRGGENISP 482
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
+E+EEF+ THP++ + GVPDE+ GE++ + +K+
Sbjct: 483 REVEEFLYTHPDIQDVQVVGVPDEKYGEQLMACVIMKDG 521
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDG ++ GRIKD++IRGGENI P+E+EEF+ THP++ + GVPDE+ GE++
Sbjct: 453 DLASMDEDGSVRIEGRIKDLVIRGGENISPREVEEFLYTHPDIQDVQVVGVPDEKYGEQL 512
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSKF 485
+ +K+ + L D +R F G+++ F
Sbjct: 513 MACVIMKDGIEPLTVDAVREFAAGRIAHF 541
>gi|294501637|ref|YP_003565337.1| AMP-binding domain-containing protein [Bacillus megaterium QM
B1551]
gi|294351574|gb|ADE71903.1| AMP-binding enzyme domain protein [Bacillus megaterium QM B1551]
Length = 528
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Query: 375 KKYLREEENITVPDSAGRSIFEK-----DQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 429
K YL + +P+ ++I E D + +DGY ++ GR+KDMIIRGGENIYP+E
Sbjct: 379 KGYLTMKGYYKMPEETEKTIVEGWLHTGDLATIDKDGYVKITGRLKDMIIRGGENIYPRE 438
Query: 430 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
IEEF+ P V + G+PD + GE V IKLK+++ L A +I+ FCKGK++ F
Sbjct: 439 IEEFLYRIPEVEDVQIVGIPDPKYGERVAACIKLKQHSFLTAQEIKDFCKGKLAHF 494
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 78/153 (50%), Gaps = 38/153 (24%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
FG GEL +G+ M GY++ ++T++TI + WL TG
Sbjct: 370 FGEQGELCAKGYLTMKGYYKMPEETEKTI-VEGWLHTG---------------------- 406
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
D + +DGY ++ GR+KDMIIRGGENIYP+EIEEF+ P V +
Sbjct: 407 ---------------DLATIDKDGYVKITGRLKDMIIRGGENIYPREIEEFLYRIPEVED 451
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
G+PD + GE V IKLK+++ L A E K
Sbjct: 452 VQIVGIPDPKYGERVAACIKLKQHSFLTAQEIK 484
>gi|398864574|ref|ZP_10620107.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
gi|398244873|gb|EJN30407.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
Length = 565
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 80/168 (47%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D VP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNPVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK +++ +CK +++ F
Sbjct: 500 VAWIKFHPGHSATEQELQAWCKERIAHF 527
>gi|145477401|ref|XP_001424723.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391789|emb|CAK57325.1| unnamed protein product [Paramecium tetraurelia]
Length = 572
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 80/161 (49%), Gaps = 37/161 (22%)
Query: 18 SFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ + K+VD N +IVP T GE RG+ M GYW DE+ TK I + +L +G
Sbjct: 386 NMEVKIVDSNGKIVPCDTTGEYCSRGYAVMKGYWGDEKATKNAIDENGFLHSG------- 438
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + ++GY +VGRIKDMIIRGGENIYP
Sbjct: 439 ------------------------------DLATMDKNGYVAIVGRIKDMIIRGGENIYP 468
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
KEIE+++ V + G DE+ GEEV IK+K+ A+
Sbjct: 469 KEIEDYLSHMTGVEQVQVVGCFDEKYGEEVVALIKMKKGAE 509
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY +VGRIKDMIIRGGENIYPKEIE+++ V + G DE+ GEEV
Sbjct: 439 DLATMDKNGYVAIVGRIKDMIIRGGENIYPKEIEDYLSHMTGVEQVQVVGCFDEKYGEEV 498
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
IK+K+ A +L+ D+ FC +++ +
Sbjct: 499 VALIKMKKGAEELSGLDVYQFCHKRIAHY 527
>gi|384044522|ref|YP_005492539.1| fatty-acid--coa ligase transmembrane protein [Bacillus megaterium
WSH-002]
gi|345442213|gb|AEN87230.1| Putative fatty-acid--coa ligase transmembrane protein [Bacillus
megaterium WSH-002]
Length = 528
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Query: 375 KKYLREEENITVPDSAGRSIFEK-----DQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 429
K YL + +P+ ++I E D + +DGY ++ GR+KDMIIRGGENIYP+E
Sbjct: 379 KGYLTMKGYYKMPEETEKTIVEGWLHTGDLATIDKDGYVKITGRLKDMIIRGGENIYPRE 438
Query: 430 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
IEEF+ P V + G+PD + GE V IKLK+++ L A +I+ FCKGK++ F
Sbjct: 439 IEEFLYRIPEVEDVQIVGIPDPKYGERVAACIKLKQHSFLTAQEIKDFCKGKLAHF 494
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 78/153 (50%), Gaps = 38/153 (24%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
FG GEL +G+ M GY++ ++T++TI + WL TG
Sbjct: 370 FGEQGELCAKGYLTMKGYYKMPEETEKTI-VEGWLHTG---------------------- 406
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
D + +DGY ++ GR+KDMIIRGGENIYP+EIEEF+ P V +
Sbjct: 407 ---------------DLATIDKDGYVKITGRLKDMIIRGGENIYPREIEEFLYRIPEVED 451
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
G+PD + GE V IKLK+++ L A E K
Sbjct: 452 VQIVGIPDPKYGERVAACIKLKQHSFLTAQEIK 484
>gi|359787358|ref|ZP_09290414.1| long-chain-fatty-acid--CoA ligase [Halomonas sp. GFAJ-1]
gi|359295375|gb|EHK59645.1| long-chain-fatty-acid--CoA ligase [Halomonas sp. GFAJ-1]
Length = 556
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 90/180 (50%), Gaps = 41/180 (22%)
Query: 5 NPTD-LQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
NPT+ +Q ++ + K VD + V G PGEL ++G M GYW+ E++T+ +I
Sbjct: 368 NPTNAIQLGSIGKPVAGTSVKAVDADGNEVALGEPGELCVQGPQVMKGYWQREEETRNSI 427
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W TG D VL+EDGY ++V
Sbjct: 428 DEDGWFHTG-------------------------------------DIAVLQEDGYIRIV 450
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
R KDMI+ G N+YP EIE+ + HP+VLE A GVPDE GE + + + + +N++L+A
Sbjct: 451 DRKKDMILVSGFNVYPNEIEDVVAAHPDVLETAAVGVPDENAGEAIKLFV-VSKNSQLDA 509
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Query: 356 KVALTWPNSMDSEARIYHYKKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIK 415
+VAL P + + + REEE D G D VL+EDGY ++V R K
Sbjct: 396 EVALGEPGELCVQGPQVMKGYWQREEETRNSIDEDGW-FHTGDIAVLQEDGYIRIVDRKK 454
Query: 416 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIR 475
DMI+ G N+YP EIE+ + HP+VLE A GVPDE GE + + + + +N++L+A+ +R
Sbjct: 455 DMILVSGFNVYPNEIEDVVAAHPDVLETAAVGVPDENAGEAIKLFV-VSKNSQLDAETLR 513
Query: 476 TFCKGKVSKF 485
++CK +++ +
Sbjct: 514 SWCKKELTGY 523
>gi|444305385|ref|ZP_21141168.1| AMP-dependent synthetase and ligase [Arthrobacter sp. SJCon]
gi|443482303|gb|ELT45215.1| AMP-dependent synthetase and ligase [Arthrobacter sp. SJCon]
Length = 559
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 79/157 (50%), Gaps = 38/157 (24%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+++V+D + ++ G GEL RG+ M GYW +KT E I D W+ TG
Sbjct: 383 LESQVIDPASGDVLERGEIGELCTRGYAVMAGYWNQPEKTAEVIDADGWMHTG------- 435
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D ++ +DGY + GRIKDM+IRGGENIYP
Sbjct: 436 ------------------------------DLALMDDDGYVVIEGRIKDMVIRGGENIYP 465
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
+EIEEF+ THP + + GVPDE+ GEE+ I LK
Sbjct: 466 REIEEFLYTHPAIQDVQVIGVPDEKYGEELMACIILK 502
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ +DGY + GRIKDM+IRGGENIYP+EIEEF+ THP + + GVPDE+ GEE+
Sbjct: 436 DLALMDDDGYVVIEGRIKDMVIRGGENIYPREIEEFLYTHPAIQDVQVIGVPDEKYGEEL 495
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSKF 485
I LK + L+AD + FC+G ++ +
Sbjct: 496 MACIILKPGEEPLDADAVAGFCRGNLAHY 524
>gi|399053605|ref|ZP_10742404.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. CF112]
gi|433546213|ref|ZP_20502546.1| long-chain-fatty-acid--CoA ligase [Brevibacillus agri BAB-2500]
gi|398048382|gb|EJL40854.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. CF112]
gi|432182483|gb|ELK40051.1| long-chain-fatty-acid--CoA ligase [Brevibacillus agri BAB-2500]
Length = 552
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 386 VPDSAGRSIFEK------DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
+PD ++I E+ D + E+GY ++ GR+KDMIIRGGENIYP+E+EEF+ THP
Sbjct: 403 MPDQTAKAIDEEGWLHTGDLATVDEEGYYRITGRLKDMIIRGGENIYPREVEEFLYTHPK 462
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+L+ GVPD + GE+V I++K L +++ +C+GK+++F
Sbjct: 463 ILDVQIVGVPDAKYGEQVLACIRVKPGETLTEEEVLAYCEGKIARF 508
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 81/167 (48%), Gaps = 38/167 (22%)
Query: 18 SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTS 76
+AK+++ IVP G GEL RG+ M GY+ +T + I + WL TG
Sbjct: 367 GVEAKIINPATGEIVPPGVQGELCTRGYLVMKGYYNMPDQTAKAIDEEGWLHTG------ 420
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
D + E+GY ++ GR+KDMIIRGGENIY
Sbjct: 421 -------------------------------DLATVDEEGYYRITGRLKDMIIRGGENIY 449
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
P+E+EEF+ THP +L+ GVPD + GE+V I++K L E
Sbjct: 450 PREVEEFLYTHPKILDVQIVGVPDAKYGEQVLACIRVKPGETLTEEE 496
>gi|326202013|ref|ZP_08191883.1| AMP-dependent synthetase and ligase [Clostridium papyrosolvens DSM
2782]
gi|325987808|gb|EGD48634.1| AMP-dependent synthetase and ligase [Clostridium papyrosolvens DSM
2782]
Length = 554
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 88/182 (48%), Gaps = 40/182 (21%)
Query: 8 DLQFSTLSSSS--FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPD 64
+L+ ST+ S + K+VD N+ +P G PGE + RG+ M GY++ + T + I D
Sbjct: 357 ELRVSTVGRSLPFIECKIVDPETNQDLPDGVPGEFVARGYNVMKGYYKMPEATAQAIDAD 416
Query: 65 RWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRI 124
WL TG D E+GY ++ GRI
Sbjct: 417 GWLHTG-------------------------------------DLATRDENGYYKITGRI 439
Query: 125 KDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
KDMIIRGGENIYPKEIEEF+ T P + + GVP + GEE+ + LKE L +
Sbjct: 440 KDMIIRGGENIYPKEIEEFLYTLPEIKDVQVIGVPSKVYGEEIMACVILKEGCSLTEEQV 499
Query: 185 KS 186
K+
Sbjct: 500 KA 501
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
E+GY ++ GRIKDMIIRGGENIYPKEIEEF+ T P + + GVP + GEE+ + L
Sbjct: 429 ENGYYKITGRIKDMIIRGGENIYPKEIEEFLYTLPEIKDVQVIGVPSKVYGEEIMACVIL 488
Query: 464 KENAKLNADDIRTFCKGKVSK 484
KE L + ++ K +++
Sbjct: 489 KEGCSLTEEQVKAAVKANMAR 509
>gi|119479619|ref|XP_001259838.1| AMP-binding enzyme, putative [Neosartorya fischeri NRRL 181]
gi|119407992|gb|EAW17941.1| AMP-binding enzyme, putative [Neosartorya fischeri NRRL 181]
Length = 616
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 86/189 (45%), Gaps = 45/189 (23%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNR--IVPFGTPGELLIRGHCNMLGYWEDEQKTKET 60
+P D + ST+ +AKVVD NR I+P T GEL + G+ M YW D KT E
Sbjct: 410 DPLDKRISTVGRLMPHVEAKVVDPANRSKILPINTRGELAVSGYLLMKEYWGDPHKTAEV 469
Query: 61 IGPDR----WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDG 116
+ D+ W+ TG D+ + DG
Sbjct: 470 MIADQEGKIWMHTG-------------------------------------DEASMSPDG 492
Query: 117 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
Y + GRIKD+IIRGGENI+P EIE + T P V + GVPDER GE V I KE
Sbjct: 493 YITITGRIKDLIIRGGENIHPLEIENCLLTCPGVADVSVVGVPDERYGEVVAAFIICKEQ 552
Query: 177 AKLNAYEDK 185
+ EDK
Sbjct: 553 DRRTVTEDK 561
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ + DGY + GRIKD+IIRGGENI+P EIE + T P V + GVPDER GE V
Sbjct: 484 DEASMSPDGYITITGRIKDLIIRGGENIHPLEIENCLLTCPGVADVSVVGVPDERYGEVV 543
Query: 458 GISIKLKENAK--LNADDIRTFCKGKVS 483
I KE + + D IR + + ++S
Sbjct: 544 AAFIICKEQDRRTVTEDKIREWVRERLS 571
>gi|154150313|ref|YP_001403931.1| AMP-dependent synthetase/ligase [Methanoregula boonei 6A8]
gi|153998865|gb|ABS55288.1| AMP-dependent synthetase and ligase [Methanoregula boonei 6A8]
Length = 566
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY +VVGR+KDM+IRGGENIYP+EIEEF+ H V + Y GVPD + GEE+
Sbjct: 435 DLATMDEEGYFKVVGRLKDMVIRGGENIYPREIEEFLHHHEKVSDVYVVGVPDIKYGEEL 494
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+K+K L D+++ FCKGK++ F
Sbjct: 495 CAWVKVKAGQALTEDEVKEFCKGKIAHF 522
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + + +T+ + + K++D +IVP G GE+ RG+C M Y+ + T T+
Sbjct: 366 DPLERRVTTIGRAFPHTELKIIDPKTGKIVPMGEVGEICARGYCVMKCYYNNPAATHATL 425
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W TG D + E+GY +VV
Sbjct: 426 DKDHWNHTG-------------------------------------DLATMDEEGYFKVV 448
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDM+IRGGENIYP+EIEEF+ H V + Y GVPD + GEE+ +K+K L
Sbjct: 449 GRLKDMVIRGGENIYPREIEEFLHHHEKVSDVYVVGVPDIKYGEELCAWVKVKAGQALTE 508
Query: 182 YEDK 185
E K
Sbjct: 509 DEVK 512
>gi|399003457|ref|ZP_10706121.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM18]
gi|398122936|gb|EJM12517.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM18]
Length = 564
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 80/168 (47%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D VP GT GEL RG+ MLGYW + Q T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNPVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDEAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCPRYGEEIVAWIKF 505
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCPRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK +++ +CK +++ F
Sbjct: 500 VAWIKFHPGHSATEQELQAWCKERIAHF 527
>gi|226312117|ref|YP_002772011.1| long-chain-fatty-acid--CoA ligase [Brevibacillus brevis NBRC
100599]
gi|226095065|dbj|BAH43507.1| long-chain-fatty-acid--CoA ligase [Brevibacillus brevis NBRC
100599]
Length = 552
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
Query: 381 EENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
EE + D G + D + E+GY ++ GR+KDMIIRGGENIYP+E+EEF+ THP V
Sbjct: 405 EETVKAIDHEGW-LHTGDLATVDEEGYYRITGRLKDMIIRGGENIYPREVEEFLYTHPKV 463
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
L+ GVPD + GE+V I++K + L+ D++R +C+GK++ +
Sbjct: 464 LDVQIIGVPDVKYGEQVLACIRVKPHETLSEDEVRDYCEGKIAHY 508
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 84/165 (50%), Gaps = 38/165 (23%)
Query: 17 SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKT 75
+ +AK++D I+P G GEL RG+ M GY+ ++T + I + WL TG
Sbjct: 366 AEVEAKIIDPATGDILPPGVQGELCTRGYLVMKGYYNMPEETVKAIDHEGWLHTG----- 420
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
D + E+GY ++ GR+KDMIIRGGENI
Sbjct: 421 --------------------------------DLATVDEEGYYRITGRLKDMIIRGGENI 448
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
YP+E+EEF+ THP VL+ GVPD + GE+V I++K + L+
Sbjct: 449 YPREVEEFLYTHPKVLDVQIIGVPDVKYGEQVLACIRVKPHETLS 493
>gi|410090765|ref|ZP_11287350.1| AMP-binding domain protein [Pseudomonas viridiflava UASWS0038]
gi|409761922|gb|EKN46964.1| AMP-binding domain protein [Pseudomonas viridiflava UASWS0038]
Length = 557
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 84/171 (49%), Gaps = 39/171 (22%)
Query: 5 NPTDLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P +L+ +++ + + KV+D + V G GEL RG+ MLGYW+D + T I
Sbjct: 364 DPLELRVTSVGRTQPHLEHKVIDTDANTVERGQVGELCTRGYSVMLGYWQDAEATARDID 423
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
+ W+ TG D + DGY +VG
Sbjct: 424 AEGWMHTG-------------------------------------DLVQMDADGYVTIVG 446
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
R KDMIIRGGENIYP+EIEE + H ++ EAY G+P +R GE++ ++L
Sbjct: 447 RSKDMIIRGGENIYPREIEELLLQHSDIAEAYVVGIPCDRYGEDLVAWVRL 497
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + DGY +VGR KDMIIRGGENIYP+EIEE + H ++ EAY G+P +R GE++
Sbjct: 432 DLVQMDADGYVTIVGRSKDMIIRGGENIYPREIEELLLQHSDIAEAYVVGIPCDRYGEDL 491
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++L +R F + +V+ F
Sbjct: 492 VAWVRLHPGHVCEEPLLRDFFRSRVAHF 519
>gi|384265593|ref|YP_005421300.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387898579|ref|YP_006328875.1| AMP-binding protein [Bacillus amyloliquefaciens Y2]
gi|380498946|emb|CCG49984.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387172689|gb|AFJ62150.1| AMP-binding domain protein [Bacillus amyloliquefaciens Y2]
Length = 546
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Query: 370 RIYHYKK-YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 428
R YH K Y + +E + D V+ EDGY ++ GR+KDM+IRGGENIYP+
Sbjct: 394 RGYHVMKGYYKNQEATEAAIDKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPR 453
Query: 429 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
EIEE + HP V + GVPD + GEE I+LK+ +A+DIR FCK ++++
Sbjct: 454 EIEEMLYRHPAVADVQVVGVPDPKYGEEAAAWIRLKDGQTASAEDIRAFCKEHIARY 510
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 37/158 (23%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY+++++ T+ I D WL TG
Sbjct: 386 GEQGELCTRGYHVMKGYYKNQEATEAAIDKDGWLHTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEE + HP V +
Sbjct: 423 --------------DLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDY 191
GVPD + GEE I+LK+ +A + ++ ++
Sbjct: 469 QVVGVPDPKYGEEAAAWIRLKDGQTASAEDIRAFCKEH 506
>gi|89902592|ref|YP_525063.1| AMP-binding domain-containing protein [Rhodoferax ferrireducens
T118]
gi|89347329|gb|ABD71532.1| AMP-dependent synthetase and ligase [Rhodoferax ferrireducens T118]
Length = 601
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 86/201 (42%), Gaps = 50/201 (24%)
Query: 1 MWDMNPTDLQFST------------LSSSSFQAKVVDH-NNRIVPFGTPGELLIRGHCNM 47
M + +P Q ST L Q KV+D + V G GEL RG+ M
Sbjct: 390 MTETSPVSCQSSTTTPLEKRVATVGLVQPHLQVKVIDPVSGETVAPGVSGELCTRGYSVM 449
Query: 48 LGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVS 107
GYWED +T E I W+ TG
Sbjct: 450 HGYWEDPVRTAEAIDEQGWMHTG------------------------------------- 472
Query: 108 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
D + +GY +VGRIKDM+IRGGENIYP+EIEEF+ HP + + G+PD + GEE+
Sbjct: 473 DLATMDIEGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPQIQDVQVVGIPDPKYGEEL 532
Query: 168 GISIKLKENAKLNAYEDKSIS 188
I K L+ E K+
Sbjct: 533 CAWIIAKPGQTLSEIEVKAFC 553
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
+GY +VGRIKDM+IRGGENIYP+EIEEF+ HP + + G+PD + GEE+ I K
Sbjct: 480 EGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPQIQDVQVVGIPDPKYGEELCAWIIAK 539
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
L+ +++ FCKG+++ +
Sbjct: 540 PGQTLSEIEVKAFCKGQIAHY 560
>gi|447917306|ref|YP_007397874.1| AMP-binding domain protein [Pseudomonas poae RE*1-1-14]
gi|445201169|gb|AGE26378.1| AMP-binding domain protein [Pseudomonas poae RE*1-1-14]
Length = 544
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 75/165 (45%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ ++D V G GEL RG+ MLGYW + + T+ETI WL TG
Sbjct: 368 LENAIIDAAGNTVARGEIGELCTRGYSVMLGYWNNPESTRETIDEAGWLHTG-------- 419
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + GY + GR KDMIIRGGEN+YP+
Sbjct: 420 -----------------------------DLATMDRHGYVCIAGRNKDMIIRGGENVYPR 450
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
E+EEF THP V + G+PDER GEE+ IK ++A E
Sbjct: 451 ELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKCHPGHAVDALE 495
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + GY + GR KDMIIRGGEN+YP+E+EEF THP V + G+PDER GEE+
Sbjct: 420 DLATMDRHGYVCIAGRNKDMIIRGGENVYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 479
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK ++A ++ T+CKG+++ F
Sbjct: 480 VAWIKCHPGHAVDALELHTWCKGRIAHF 507
>gi|302900576|ref|XP_003048290.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729223|gb|EEU42577.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 575
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 81/169 (47%), Gaps = 41/169 (24%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR----WLRTGRYKKT 75
+AK+VD + IVP G+ GEL I G+ GYW + +KT ET+ D WL TG
Sbjct: 384 KAKIVDRDGNIVPLGSRGELCIGGYQLQAGYWNNSEKTNETMMRDASGVLWLHTG----- 438
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
D+ V E GY + GR KD+IIRGGENI
Sbjct: 439 --------------------------------DEAVFDEAGYCSITGRFKDIIIRGGENI 466
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
YP EIEE + HPN+ A G+ ++ GE VG ++L E + +E+
Sbjct: 467 YPLEIEERLMAHPNISRAIVVGLKNKHYGEVVGAFVELAEGHQKPTFEE 515
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ V E GY + GR KD+IIRGGENIYP EIEE + HPN+ A G+ ++ GE V
Sbjct: 439 DEAVFDEAGYCSITGRFKDIIIRGGENIYPLEIEERLMAHPNISRAIVVGLKNKHYGEVV 498
Query: 458 GISIKLKE-NAKLNADDIRTFCKGKVS 483
G ++L E + K ++++ +C+ ++
Sbjct: 499 GAFVELAEGHQKPTFEELKDWCRKRLG 525
>gi|398874629|ref|ZP_10629833.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM74]
gi|398194509|gb|EJM81580.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM74]
Length = 565
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 81/168 (48%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D +VP GT GEL RG+ MLGYW + + T + I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPEGTAQAIDQAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY + GR KDMIIRGGENIYP+E+EEF THP V + G+P R GEE+
Sbjct: 440 DLASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEI 499
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK +++ +CK +++ F
Sbjct: 500 VAWIKFHPGHSATEQELQAWCKERIAHF 527
>gi|398816032|ref|ZP_10574690.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. BC25]
gi|398033379|gb|EJL26682.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. BC25]
Length = 552
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
Query: 381 EENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
EE + D G + D + E+GY ++ GR+KDMIIRGGENIYP+E+EEF+ THP V
Sbjct: 405 EETVKAIDHEGW-LHTGDLATVDEEGYYRITGRLKDMIIRGGENIYPREVEEFLYTHPKV 463
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
L+ G+PD + GE+V I++K + L D++R +C+GK++ +
Sbjct: 464 LDVQIVGIPDAKYGEQVLACIRVKPHETLTEDEVRDYCEGKIAHY 508
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 42/178 (23%)
Query: 17 SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKT 75
+ +AK++D I+P G GEL RG+ M GY+ ++T + I + WL TG
Sbjct: 366 AEVEAKIIDPATGDILPPGVQGELCTRGYLVMKGYYNMPEETVKAIDHEGWLHTG----- 420
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
D + E+GY ++ GR+KDMIIRGGENI
Sbjct: 421 --------------------------------DLATVDEEGYYRITGRLKDMIIRGGENI 448
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDYHE 193
YP+E+EEF+ THP VL+ G+PD + GE+V I++K + L E + DY E
Sbjct: 449 YPREVEEFLYTHPKVLDVQIVGIPDAKYGEQVLACIRVKPHETLTEDEVR----DYCE 502
>gi|374299364|ref|YP_005051003.1| long-chain-fatty-acid--CoA ligase [Desulfovibrio africanus str.
Walvis Bay]
gi|332552300|gb|EGJ49344.1| Long-chain-fatty-acid--CoA ligase [Desulfovibrio africanus str.
Walvis Bay]
Length = 549
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 60/86 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY + GR+KDMIIRGGENIYP+EIEEF+ + P + + GVP + GEEV
Sbjct: 424 DLGVMDERGYVTITGRLKDMIIRGGENIYPREIEEFLYSMPGIRDVQVAGVPSRKYGEEV 483
Query: 458 GISIKLKENAKLNADDIRTFCKGKVS 483
G I LKE A L +D+R FC+GK++
Sbjct: 484 GAFIILKEGANLAPEDVRDFCRGKIA 509
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 78/166 (46%), Gaps = 38/166 (22%)
Query: 15 SSSSFQAKVVDHNNR-IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYK 73
S + ++D R +VP T GE+ RG+ M GY+ + + T E I WL +G
Sbjct: 367 SMPEIEVCIMDPETRQVVPPNTVGEICCRGYNLMKGYYNNAKATTEAIDAHGWLHSG--- 423
Query: 74 KTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGE 133
D V+ E GY + GR+KDMIIRGGE
Sbjct: 424 ----------------------------------DLGVMDERGYVTITGRLKDMIIRGGE 449
Query: 134 NIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKL 179
NIYP+EIEEF+ + P + + GVP + GEEVG I LKE A L
Sbjct: 450 NIYPREIEEFLYSMPGIRDVQVAGVPSRKYGEEVGAFIILKEGANL 495
>gi|302344469|ref|YP_003808998.1| AMP-dependent synthetase and ligase [Desulfarculus baarsii DSM
2075]
gi|301641082|gb|ADK86404.1| AMP-dependent synthetase and ligase [Desulfarculus baarsii DSM
2075]
Length = 548
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D VL DGY + GR KDMIIRGGENIYP E+EEFI+ P V + GVP ++ GE+V
Sbjct: 425 DLGVLDADGYLAITGRYKDMIIRGGENIYPLEVEEFIRHIPGVRDVQVVGVPSQKYGEQV 484
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
G I+L E A L A+D+R C+G++S++
Sbjct: 485 GAFIQLAEGADLTAEDVRDLCRGQISRY 512
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 82/172 (47%), Gaps = 38/172 (22%)
Query: 18 SFQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTS 76
+ K+VD + + +P GT GE+ RG+ M GY+ + T + I D WL +G
Sbjct: 371 GIEVKIVDPESHVELPTGTIGEVCCRGYSVMKGYYNMPEATAQAIDHDGWLHSG------ 424
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
D VL DGY + GR KDMIIRGGENIY
Sbjct: 425 -------------------------------DLGVLDADGYLAITGRYKDMIIRGGENIY 453
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
P E+EEFI+ P V + GVP ++ GE+VG I+L E A L A + + +
Sbjct: 454 PLEVEEFIRHIPGVRDVQVVGVPSQKYGEQVGAFIQLAEGADLTAEDVRDLC 505
>gi|399022746|ref|ZP_10724815.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Chryseobacterium sp. CF314]
gi|398084166|gb|EJL74862.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Chryseobacterium sp. CF314]
Length = 539
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 39/176 (22%)
Query: 10 QFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWL 67
Q ST+ + + K+++ N ++V G GEL RG+ ML YW D + T + + RW+
Sbjct: 350 QVSTVGTVQDHLEIKIINENGKVVNRGEHGELCTRGYSVMLKYWNDPENTGKVLDDARWM 409
Query: 68 RTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDM 127
TG D V+ ++GY + GRIKD+
Sbjct: 410 HTG-------------------------------------DLAVMDDEGYITISGRIKDL 432
Query: 128 IIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
IIRGGENI PKEIE+F+ T+ N+L+ GVP E+ GEEV +K+++ ++ E
Sbjct: 433 IIRGGENISPKEIEDFLYTYRNILDVQIIGVPSEKFGEEVMAWVKIRKGFEITENE 488
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 70/110 (63%)
Query: 376 KYLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQ 435
KY + EN R + D V+ ++GY + GRIKD+IIRGGENI PKEIE+F+
Sbjct: 391 KYWNDPENTGKVLDDARWMHTGDLAVMDDEGYITISGRIKDLIIRGGENISPKEIEDFLY 450
Query: 436 THPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
T+ N+L+ GVP E+ GEEV +K+++ ++ +++ +CKG+++ +
Sbjct: 451 TYRNILDVQIIGVPSEKFGEEVMAWVKIRKGFEITENELLDYCKGRIAHY 500
>gi|452976215|gb|EME76031.1| acyl-CoA synthetase [Bacillus sonorensis L12]
Length = 539
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 70/105 (66%), Gaps = 7/105 (6%)
Query: 388 DSAGRSIFEKDQFV-------LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
+ A R +KD ++ + +DGY ++ GR+KDMI+RGGENIYP+EIEEF+ H ++
Sbjct: 397 EEATRKAIDKDGWLHTGDLAEMDQDGYVRITGRLKDMIVRGGENIYPREIEEFLYEHEDI 456
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
++ GVPDE+ GE+ IK K L+ +D+RTFCKG++S +
Sbjct: 457 VDVQVVGVPDEKYGEKTAAFIKCKPGKTLSLEDVRTFCKGQLSYY 501
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 72/144 (50%), Gaps = 37/144 (25%)
Query: 37 GELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQ 96
GEL RG+ M GY++ E+ T++ I D WL TG
Sbjct: 380 GELCTRGYLVMKGYYKMEEATRKAIDKDGWLHTG-------------------------- 413
Query: 97 QQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAY 156
D + +DGY ++ GR+KDMI+RGGENIYP+EIEEF+ H ++++
Sbjct: 414 -----------DLAEMDQDGYVRITGRLKDMIVRGGENIYPREIEEFLYEHEDIVDVQVV 462
Query: 157 GVPDERMGEEVGISIKLKENAKLN 180
GVPDE+ GE+ IK K L+
Sbjct: 463 GVPDEKYGEKTAAFIKCKPGKTLS 486
>gi|220913513|ref|YP_002488822.1| AMP-dependent synthetase and ligase [Arthrobacter chlorophenolicus
A6]
gi|219860391|gb|ACL40733.1| AMP-dependent synthetase and ligase [Arthrobacter chlorophenolicus
A6]
Length = 558
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 78/161 (48%), Gaps = 38/161 (23%)
Query: 19 FQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
++K+VD + + G GEL RG+ M GYW +KT E I + W+ TG +
Sbjct: 382 LESKIVDPVSGDVAERGEIGELCTRGYAVMDGYWNQPEKTAEAIDAEGWMHTGDLAR--- 438
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
+ DGY V GRIKDM+IRGGENIYP
Sbjct: 439 ----------------------------------MDADGYVLVEGRIKDMVIRGGENIYP 464
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP V + GVPDE+ GEE+ I LK A+
Sbjct: 465 REIEEFLYTHPAVQDVQVIGVPDEKYGEELMACIILKPGAE 505
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY V GRIKDM+IRGGENIYP+EIEEF+ THP V + GVPDE+ GEE+ I LK
Sbjct: 442 DGYVLVEGRIKDMVIRGGENIYPREIEEFLYTHPAVQDVQVIGVPDEKYGEELMACIILK 501
Query: 465 ENAK-LNADDIRTFCKGKVSKF 485
A+ L+A + FC+GK++ +
Sbjct: 502 PGAEPLDAAAVADFCRGKLAHY 523
>gi|312128103|ref|YP_003992977.1| amp-dependent synthetase and ligase [Caldicellulosiruptor
hydrothermalis 108]
gi|311778122|gb|ADQ07608.1| AMP-dependent synthetase and ligase [Caldicellulosiruptor
hydrothermalis 108]
Length = 553
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 88/176 (50%), Gaps = 40/176 (22%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + + ST+ + K+VD H + VP G GE+ RG+ M GY++ + TK+ I
Sbjct: 353 DPLEFRVSTVGKPLEGVEVKIVDIHTKKEVPNGVVGEICARGYNVMKGYYKMPEATKQAI 412
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D + ++GY ++
Sbjct: 413 DEDGWLHTG-------------------------------------DLGYIDQNGYLRIT 435
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
GR+KDMIIRGGENIYP+EIEEF+ +HP V + GVPD+ GEE+ I LK+ +
Sbjct: 436 GRLKDMIIRGGENIYPREIEEFLYSHPAVKDVQVVGVPDKVYGEEIVAFIILKDGS 491
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 59/83 (71%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ ++GY ++ GR+KDMIIRGGENIYP+EIEEF+ +HP V + GVPD+ GEE+ I
Sbjct: 426 IDQNGYLRITGRLKDMIIRGGENIYPREIEEFLYSHPAVKDVQVVGVPDKVYGEEIVAFI 485
Query: 462 KLKENAKLNADDIRTFCKGKVSK 484
LK+ + + ++I+ F K +S+
Sbjct: 486 ILKDGSCASEEEIKEFVKANLSR 508
>gi|115610677|ref|XP_784098.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 556
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 77/161 (47%), Gaps = 38/161 (23%)
Query: 15 SSSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYK 73
S K+VD + ++P G GEL IR M+GYW DE+ TKET+ RWL TG
Sbjct: 376 SMKELLMKMVDPSSGDVMPVGKQGELCIRAPWVMVGYWGDEENTKETLDQTRWLHTGDLA 435
Query: 74 KTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGE 133
K + DGY +VGRIKD++IRG E
Sbjct: 436 K-------------------------------------MDSDGYISIVGRIKDVVIRGAE 458
Query: 134 NIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
NI +IE+ + THP + + GVPDERM EE+ +KLK
Sbjct: 459 NISTIQIEQCLHTHPKIEDVQVVGVPDERMIEELCACVKLK 499
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y +EEN R + D + DGY +VGRIKD++IRG ENI +IE+ + T
Sbjct: 412 YWGDEENTKETLDQTRWLHTGDLAKMDSDGYISIVGRIKDVVIRGAENISTIQIEQCLHT 471
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
HP + + GVPDERM EE+ +KLK +DIR FC+GK+S +
Sbjct: 472 HPKIEDVQVVGVPDERMIEELCACVKLKAGETCEKEDIREFCRGKLSHY 520
>gi|384106029|ref|ZP_10006942.1| AMP-dependent synthetase/ligase [Rhodococcus imtechensis RKJ300]
gi|383834552|gb|EID73988.1| AMP-dependent synthetase/ligase [Rhodococcus imtechensis RKJ300]
Length = 506
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 80/175 (45%), Gaps = 37/175 (21%)
Query: 9 LQFSTLSSSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLR 68
+ F+ + + +V DH+N P GT GE+ ++G M GYW T + D WLR
Sbjct: 315 IGFTGRAVPRLEVQVRDHDNTACPPGTVGEVFVKGATVMKGYWNRPSDTAAVLDSDGWLR 374
Query: 69 TGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMI 128
TG D + DG ++V R+KD+I
Sbjct: 375 TG-------------------------------------DLGEIDADGDLRIVDRVKDLI 397
Query: 129 IRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
IRGG N+YP E+EE + THP++LEA GVPD+ GEEV + + L+ E
Sbjct: 398 IRGGYNVYPSEVEEVLYTHPDILEAAVVGVPDDHYGEEVAAVVATVPGSGLDGGE 452
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DG ++V R+KD+IIRGG N+YP E+EE + THP++LEA GVPD+ GEEV +
Sbjct: 384 DGDLRIVDRVKDLIIRGGYNVYPSEVEEVLYTHPDILEAAVVGVPDDHYGEEVAAVVATV 443
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+ L+ ++ ++ + ++S +
Sbjct: 444 PGSGLDGGELTSWARERLSAY 464
>gi|88602899|ref|YP_503077.1| AMP-dependent synthetase/ligase [Methanospirillum hungatei JF-1]
gi|88188361|gb|ABD41358.1| AMP-dependent synthetase and ligase [Methanospirillum hungatei
JF-1]
Length = 571
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 61/81 (75%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
+G+ + GR+KDM+IRGGENIYP+EIEEF+ HP + + Y GVPDE+ GEE+ IKL+
Sbjct: 447 EGFVHIEGRLKDMVIRGGENIYPREIEEFLHQHPKIADVYVIGVPDEKYGEELMAWIKLE 506
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
E A L D+IRT+ GK++++
Sbjct: 507 EGASLTEDEIRTYADGKIARY 527
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 89/185 (48%), Gaps = 40/185 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P D + +T+ + K++D +I+P G GE+ RG+ M Y+ + T++
Sbjct: 371 DPLDKRVTTVGRVFPHTEIKIIDPETKKIIPRGEIGEICARGYMTMRCYYNNPTATRQAK 430
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
W+ TG +G F +G+ +
Sbjct: 431 DEHGWVHTG---------------------------DLGSF----------DPEGFVHIE 453
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDM+IRGGENIYP+EIEEF+ HP + + Y GVPDE+ GEE+ IKL+E A L
Sbjct: 454 GRLKDMVIRGGENIYPREIEEFLHQHPKIADVYVIGVPDEKYGEELMAWIKLEEGASLTE 513
Query: 182 YEDKS 186
E ++
Sbjct: 514 DEIRT 518
>gi|383451058|ref|YP_005357779.1| AMP-dependent synthetase and ligase [Flavobacterium indicum
GPTSA100-9]
gi|380502680|emb|CCG53722.1| AMP-dependent synthetase and ligase [Flavobacterium indicum
GPTSA100-9]
Length = 547
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 89/179 (49%), Gaps = 40/179 (22%)
Query: 6 PTDLQFSTLSS--SSFQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
P + Q ST+ + + K+++ + IVP GT GEL RG+ ML YW + + T + +
Sbjct: 348 PLEKQVSTVGTIQDHLEIKIINPDTGEIVPKGTSGELCTRGYSVMLKYWNNPEATHQVLD 407
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
W+ TG D + E+GY + G
Sbjct: 408 DAGWMHTG-------------------------------------DLAQMDEEGYINITG 430
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
RIKD+IIRGGENI P+EIEEF+ TH + + GVPDE++GE + +KLK+NA + +
Sbjct: 431 RIKDVIIRGGENISPREIEEFLYTHEWIEDVQVIGVPDEKLGEAIMAWVKLKKNAPVTS 489
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 61/84 (72%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ E+GY + GRIKD+IIRGGENI P+EIEEF+ TH + + GVPDE++GE + +
Sbjct: 420 MDEEGYINITGRIKDVIIRGGENISPREIEEFLYTHEWIEDVQVIGVPDEKLGEAIMAWV 479
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
KLK+NA + +DD+ FC+ +++ +
Sbjct: 480 KLKKNAPVTSDDLLQFCQDQIAHY 503
>gi|226360627|ref|YP_002778405.1| fatty-acid--CoA ligase [Rhodococcus opacus B4]
gi|226239112|dbj|BAH49460.1| putative fatty-acid--CoA ligase [Rhodococcus opacus B4]
Length = 505
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
Q +V DH+ P GT GE+ ++G M GYW T + PD WLRTG
Sbjct: 325 QVEVRDHDGLACPPGTVGEVFVKGSTVMKGYWNRPADTAAVLDPDGWLRTG--------- 375
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + E+G ++V R+KD+IIRGG N+YP E
Sbjct: 376 ----------------------------DLGEIDEEGDLRIVDRVKDLIIRGGYNVYPSE 407
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
IEE + THP++LEA GVPD+ GEEV + + L+ +
Sbjct: 408 IEEVLYTHPDILEAAVVGVPDDHYGEEVAAVVATVPGSGLDGSQ 451
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
E+G ++V R+KD+IIRGG N+YP EIEE + THP++LEA GVPD+ GEEV +
Sbjct: 382 EEGDLRIVDRVKDLIIRGGYNVYPSEIEEVLYTHPDILEAAVVGVPDDHYGEEVAAVVAT 441
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
+ L+ + + + ++S +
Sbjct: 442 VPGSGLDGSQLTAWARERLSAY 463
>gi|374599197|ref|ZP_09672199.1| AMP-dependent synthetase and ligase [Myroides odoratus DSM 2801]
gi|423324341|ref|ZP_17302182.1| hypothetical protein HMPREF9716_01539 [Myroides odoratimimus CIP
103059]
gi|373910667|gb|EHQ42516.1| AMP-dependent synthetase and ligase [Myroides odoratus DSM 2801]
gi|404608433|gb|EKB07897.1| hypothetical protein HMPREF9716_01539 [Myroides odoratimimus CIP
103059]
Length = 537
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 83/175 (47%), Gaps = 40/175 (22%)
Query: 10 QFSTLSSSS--FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRW 66
Q ST+ + + K++D IVP G GEL RG+ ML YW + T E + +RW
Sbjct: 351 QVSTVGTVQDHLEIKIIDPETGGIVPRGEAGELCTRGYSVMLKYWNNRTLTAEVLDENRW 410
Query: 67 LRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKD 126
+ TG D + ++G+ + GRIKD
Sbjct: 411 MHTG-------------------------------------DLATMDDEGFIAITGRIKD 433
Query: 127 MIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
+IIRGGENI PK IE+F+ THP+V + GVP E+ GEEV + LKEN A
Sbjct: 434 LIIRGGENISPKWIEDFLYTHPDVADVQVIGVPSEKYGEEVMAWVILKENKTATA 488
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++G+ + GRIKD+IIRGGENI PK IE+F+ THP+V + GVP E+ GEEV
Sbjct: 415 DLATMDDEGFIAITGRIKDLIIRGGENISPKWIEDFLYTHPDVADVQVIGVPSEKYGEEV 474
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ LKEN A+ +R FC K++ +
Sbjct: 475 MAWVILKENKTATAESMREFCDQKIAHY 502
>gi|68536632|ref|YP_251337.1| AMP-binding protein [Corynebacterium jeikeium K411]
gi|68264231|emb|CAI37719.1| acyl-CoA synthetase [Corynebacterium jeikeium K411]
Length = 564
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 80/161 (49%), Gaps = 38/161 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD V G GE+LIRG M GYW+ KT + I D W+ +G
Sbjct: 385 IEVKIVDPETGETVKRGEQGEILIRGFLVMQGYWDMPGKTADAIDEDGWMHSG------- 437
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + E+GY ++ GR KDM+IRGGEN+YP
Sbjct: 438 ------------------------------DLGTMDEEGYARITGRAKDMVIRGGENLYP 467
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+EIEEF+ THP++ + GVPDE+ GEE+ I ++E+ +
Sbjct: 468 REIEEFLMTHPDISDVQVVGVPDEKYGEELMAFIIMREDTE 508
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY ++ GR KDM+IRGGEN+YP+EIEEF+ THP++ + GVPDE+ GEE+
Sbjct: 438 DLGTMDEEGYARITGRAKDMVIRGGENLYPREIEEFLMTHPDISDVQVVGVPDEKYGEEL 497
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSK 484
I ++E+ + L+ +R FC G++++
Sbjct: 498 MAFIIMREDTEPLDQAAVRDFCDGELTR 525
>gi|371776884|ref|ZP_09483206.1| AMP-binding domain protein [Anaerophaga sp. HS1]
Length = 549
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V EDGY ++ GRIKDMIIRGGENIYP+EIE F+ P + G+PDE+ GE V
Sbjct: 426 DLAVKTEDGYYKITGRIKDMIIRGGENIYPREIENFLYNMPEIEMVEVVGLPDEKYGEIV 485
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
G IKLKE A L +++R FC+GK++++
Sbjct: 486 GAFIKLKEGAFLTEEEVRDFCRGKIARY 513
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 71/147 (48%), Gaps = 37/147 (25%)
Query: 37 GELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQ 96
GE+ RG+ M GY+ D Q T+E I D WL +G
Sbjct: 392 GEICCRGYNVMKGYYNDPQATREAIDEDGWLHSG-------------------------- 425
Query: 97 QQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAY 156
D V EDGY ++ GRIKDMIIRGGENIYP+EIE F+ P +
Sbjct: 426 -----------DLAVKTEDGYYKITGRIKDMIIRGGENIYPREIENFLYNMPEIEMVEVV 474
Query: 157 GVPDERMGEEVGISIKLKENAKLNAYE 183
G+PDE+ GE VG IKLKE A L E
Sbjct: 475 GLPDEKYGEIVGAFIKLKEGAFLTEEE 501
>gi|289706149|ref|ZP_06502518.1| AMP-binding domain protein [Micrococcus luteus SK58]
gi|289557128|gb|EFD50450.1| AMP-binding domain protein [Micrococcus luteus SK58]
Length = 611
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 37/149 (24%)
Query: 30 IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLK 89
IVP G GEL RG+ MLGYW+ +KT E + D W+ +G
Sbjct: 429 IVPRGATGELCTRGYSVMLGYWDAPEKTAEVLDADGWMHSG------------------- 469
Query: 90 PLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 149
D + EDG ++ GRIKD++IRGGENI P+E+EEF+ THP+
Sbjct: 470 ------------------DLASMDEDGSVRIEGRIKDLVIRGGENISPREVEEFLYTHPD 511
Query: 150 VLEAYAYGVPDERMGEEVGISIKLKENAK 178
+ + GVPDE+ GE++ + +K+ +
Sbjct: 512 IQDVQVVGVPDEKYGEQLMACVIMKDGVE 540
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDG ++ GRIKD++IRGGENI P+E+EEF+ THP++ + GVPDE+ GE++
Sbjct: 470 DLASMDEDGSVRIEGRIKDLVIRGGENISPREVEEFLYTHPDIQDVQVVGVPDEKYGEQL 529
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSKF 485
+ +K+ + L D +R F G+++ F
Sbjct: 530 MACVIMKDGVEPLTVDAVREFAAGRIAHF 558
>gi|421872931|ref|ZP_16304547.1| AMP-binding enzyme family protein [Brevibacillus laterosporus GI-9]
gi|372457877|emb|CCF14096.1| AMP-binding enzyme family protein [Brevibacillus laterosporus GI-9]
Length = 553
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
Query: 344 KWMNPKFSTTTRKVALTWPNSMDSEARIYHYKKYLREEENITVPDSAGRSIFEKDQFVLR 403
K MNP+ T +VA + + Y E+ DS G + D +
Sbjct: 373 KLMNPE---TGEEVARGEQGELCTRGYQVMKGYYKMPEQTAQAIDSEGW-LHTGDLATVD 428
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
E GY ++ GR+KDMIIRGGENIYP+EIEEF+ TH VL+ GVPD GE+V +K+
Sbjct: 429 ESGYYRITGRLKDMIIRGGENIYPREIEEFLYTHLKVLDVQVIGVPDPHYGEQVLACVKV 488
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
+E L +++++ FC+GK+++F
Sbjct: 489 REGETLTSNELKEFCQGKIARF 510
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 75/155 (48%), Gaps = 37/155 (23%)
Query: 31 VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKP 90
V G GEL RG+ M GY++ ++T + I + WL TG
Sbjct: 383 VARGEQGELCTRGYQVMKGYYKMPEQTAQAIDSEGWLHTG-------------------- 422
Query: 91 LQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 150
D + E GY ++ GR+KDMIIRGGENIYP+EIEEF+ TH V
Sbjct: 423 -----------------DLATVDESGYYRITGRLKDMIIRGGENIYPREIEEFLYTHLKV 465
Query: 151 LEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
L+ GVPD GE+V +K++E L + E K
Sbjct: 466 LDVQVIGVPDPHYGEQVLACVKVREGETLTSNELK 500
>gi|381210101|ref|ZP_09917172.1| AMP-binding domain protein [Lentibacillus sp. Grbi]
Length = 544
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 65/87 (74%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY Q+ GR+KDMIIRGGENIYP+E+E+F+ HP+VL+ G+PD++ GEE+
Sbjct: 422 DLAVMDENGYFQITGRMKDMIIRGGENIYPREVEKFLYQHPDVLDVQVVGIPDKKYGEEL 481
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
I LK+ + +DIR+FC+G +S+
Sbjct: 482 MAWIILKDWSNATEEDIRSFCEGNISR 508
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 74/142 (52%), Gaps = 37/142 (26%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G PGEL RG+ M GY+ +++ T I D WL TG
Sbjct: 385 GEPGELCTRGYHVMKGYYNNQEATDAAIDRDGWLHTG----------------------- 421
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ E+GY Q+ GR+KDMIIRGGENIYP+E+E+F+ HP+VL+
Sbjct: 422 --------------DLAVMDENGYFQITGRMKDMIIRGGENIYPREVEKFLYQHPDVLDV 467
Query: 154 YAYGVPDERMGEEVGISIKLKE 175
G+PD++ GEE+ I LK+
Sbjct: 468 QVVGIPDKKYGEELMAWIILKD 489
>gi|339010936|ref|ZP_08643505.1| putative acyl-CoA ligase YngI [Brevibacillus laterosporus LMG
15441]
gi|338772270|gb|EGP31804.1| putative acyl-CoA ligase YngI [Brevibacillus laterosporus LMG
15441]
Length = 553
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
Query: 344 KWMNPKFSTTTRKVALTWPNSMDSEARIYHYKKYLREEENITVPDSAGRSIFEKDQFVLR 403
K MNP+ T +VA + + Y E+ DS G + D +
Sbjct: 373 KLMNPE---TGEEVARGEQGELCTRGYQVMKGYYKMPEQTAQAIDSEGW-LHTGDLATVD 428
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
E GY ++ GR+KDMIIRGGENIYP+EIEEF+ TH VL+ GVPD GE+V +K+
Sbjct: 429 ESGYYRITGRLKDMIIRGGENIYPREIEEFLYTHLKVLDVQVIGVPDPHYGEQVLACVKV 488
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
+E L +++++ FC+GK+++F
Sbjct: 489 REGETLTSNELKDFCQGKIARF 510
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 75/155 (48%), Gaps = 37/155 (23%)
Query: 31 VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKP 90
V G GEL RG+ M GY++ ++T + I + WL TG
Sbjct: 383 VARGEQGELCTRGYQVMKGYYKMPEQTAQAIDSEGWLHTG-------------------- 422
Query: 91 LQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 150
D + E GY ++ GR+KDMIIRGGENIYP+EIEEF+ TH V
Sbjct: 423 -----------------DLATVDESGYYRITGRLKDMIIRGGENIYPREIEEFLYTHLKV 465
Query: 151 LEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
L+ GVPD GE+V +K++E L + E K
Sbjct: 466 LDVQVIGVPDPHYGEQVLACVKVREGETLTSNELK 500
>gi|347756739|ref|YP_004864302.1| acyl-CoA synthetase /AMP-acid ligase II [Candidatus
Chloracidobacterium thermophilum B]
gi|347589256|gb|AEP13785.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Candidatus
Chloracidobacterium thermophilum B]
Length = 536
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 81/163 (49%), Gaps = 38/163 (23%)
Query: 18 SFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ +V D N++ VP GT GE+++RGHC M GY++ + T E + + W TG
Sbjct: 361 GIEIRVHDENDQPVPTGTVGEIVVRGHCVMKGYYKRPEATAEAMR-NGWFHTG------- 412
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
+GF + EDGY +V R KD+IIRGG N+YP
Sbjct: 413 --------------------DLGF----------IDEDGYITIVDRKKDLIIRGGYNVYP 442
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
+EIEE + THP V GVPDER+GEEV + K A +
Sbjct: 443 REIEEVMMTHPAVSLVTVIGVPDERLGEEVKAYVVRKPGATIT 485
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDGY +V R KD+IIRGG N+YP+EIEE + THP V GVPDER+GEEV
Sbjct: 413 DLGFIDEDGYITIVDRKKDLIIRGGYNVYPREIEEVMMTHPAVSLVTVIGVPDERLGEEV 472
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ K A + D++R +CK +++ +
Sbjct: 473 KAYVVRKPGATITEDELRDWCKEQMAAY 500
>gi|85094118|ref|XP_959826.1| hypothetical protein NCU06063 [Neurospora crassa OR74A]
gi|28921281|gb|EAA30590.1| hypothetical protein NCU06063 [Neurospora crassa OR74A]
Length = 580
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 84/178 (47%), Gaps = 43/178 (24%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D++ +T+ + AK+VD + +IVP GT GEL I G+ GYW + +KT E +
Sbjct: 372 DPIDVRLTTVGTLMPHAHAKIVDRDGQIVPIGTKGELCIGGYQLQAGYWNNSEKTNEVMM 431
Query: 63 PDR----WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYG 118
D WL TG D+ V E GY
Sbjct: 432 RDESGMLWLHTG-------------------------------------DEAVFNEQGYC 454
Query: 119 QVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
+ GR KD+IIRGGENIYP EIEE + HP V A G+ D+ GE VG + L++
Sbjct: 455 SITGRFKDIIIRGGENIYPLEIEERLVAHPAVSMAVVVGLKDQHYGEVVGAFLGLEKG 512
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ V E GY + GR KD+IIRGGENIYP EIEE + HP V A G+ D+ GE V
Sbjct: 444 DEAVFNEQGYCSITGRFKDIIIRGGENIYPLEIEERLVAHPAVSMAVVVGLKDQHYGEVV 503
Query: 458 GISIKL-KENAKLNADDIRTFCKGKVSK 484
G + L K + ++ +++R +C+ K+ K
Sbjct: 504 GAFLGLEKGHQPMSTEEVREWCRRKLGK 531
>gi|238493003|ref|XP_002377738.1| AMP-binding enzyme, putative [Aspergillus flavus NRRL3357]
gi|220696232|gb|EED52574.1| AMP-binding enzyme, putative [Aspergillus flavus NRRL3357]
Length = 582
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 87/180 (48%), Gaps = 45/180 (25%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNR--IVPFGTPGELLIRGHCNMLGYWEDEQKTKET 60
+P D + +T+ +AK+V+ +R I+P G PGEL + G+ M YW D Q+T E+
Sbjct: 374 DPIDKRINTVGRLMPHVEAKIVNPADRSQILPVGVPGELAVSGYLLMKEYWGDPQRTAES 433
Query: 61 IGPDR----WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDG 116
+ D W+ +G D+ + DG
Sbjct: 434 MIADEKGKVWMHSG-------------------------------------DEATISPDG 456
Query: 117 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
Y + GRIKD+IIRGGENI+P EIE I THP V++ GVPDE+ GE V I KE+
Sbjct: 457 YVTITGRIKDLIIRGGENIHPLEIENCILTHPGVMDVSVVGVPDEKYGEVVAAFIIPKEH 516
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ + DGY + GRIKD+IIRGGENI+P EIE I THP V++ GVPDE+ GE V
Sbjct: 448 DEATISPDGYVTITGRIKDLIIRGGENIHPLEIENCILTHPGVMDVSVVGVPDEKYGEVV 507
Query: 458 GISIKLKEN----AKLNADDIRTFCKGKVS 483
I KE+ A L ++IR + +G++S
Sbjct: 508 AAFIIPKEHQDEAAPLTEENIREWVRGRLS 537
>gi|148263636|ref|YP_001230342.1| AMP-binding protein [Geobacter uraniireducens Rf4]
gi|146397136|gb|ABQ25769.1| AMP-dependent synthetase and ligase [Geobacter uraniireducens Rf4]
Length = 552
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 90/184 (48%), Gaps = 40/184 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+ +L+ +T+ + + K+VD +P G GEL RG+ M GY+ ++T + I
Sbjct: 354 DAIELRVATVGRALPDVEVKIVDIETGNELPPGKQGELCTRGYLVMKGYYNMPEETAKVI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D V+ E+GY ++
Sbjct: 414 DADGWLHTG-------------------------------------DLAVMDENGYCKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIK+MIIRGGENIYP+EIEEF+ T P V + YGVPD + GE+V +I LK+ +
Sbjct: 437 GRIKNMIIRGGENIYPREIEEFLYTLPKVSDVQVYGVPDRKYGEQVMAAIVLKKGVTMTE 496
Query: 182 YEDK 185
E +
Sbjct: 497 EEAR 500
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
Query: 381 EENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
EE V D+ G + D V+ E+GY ++ GRIK+MIIRGGENIYP+EIEEF+ T P V
Sbjct: 407 EETAKVIDADGW-LHTGDLAVMDENGYCKITGRIKNMIIRGGENIYPREIEEFLYTLPKV 465
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ YGVPD + GE+V +I LK+ + ++ R FC+G+++ +
Sbjct: 466 SDVQVYGVPDRKYGEQVMAAIVLKKGVTMTEEEAREFCRGRIANY 510
>gi|281202244|gb|EFA76449.1| 4-coumarate-CoA ligase [Polysphondylium pallidum PN500]
Length = 562
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 60/82 (73%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
E+GY V+GR+KDM+IRGGEN+YP+EIEEF+ HP + +GVPDE+ GEE+ I L
Sbjct: 435 EEGYCSVIGRLKDMVIRGGENVYPREIEEFLFKHPKIQTVQVFGVPDEKYGEELCAWIIL 494
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
K + + D+I+ FCKG++S F
Sbjct: 495 KHDEQSTEDEIKQFCKGQISHF 516
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 77/158 (48%), Gaps = 39/158 (24%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+V + +IV G GE+ +RG+ MLGYW E + + D W+ TG
Sbjct: 379 LEVKLVGEDGKIVKVGEIGEIWVRGYSVMLGYW-GEPAGRNGLH-DGWMATG-------- 428
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D E+GY V+GR+KDM+IRGGEN+YP+
Sbjct: 429 -----------------------------DLGTFDEEGYCSVIGRLKDMVIRGGENVYPR 459
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
EIEEF+ HP + +GVPDE+ GEE+ I LK +
Sbjct: 460 EIEEFLFKHPKIQTVQVFGVPDEKYGEELCAWIILKHD 497
>gi|121603384|ref|YP_980713.1| AMP-binding domain-containing protein [Polaromonas
naphthalenivorans CJ2]
gi|120592353|gb|ABM35792.1| AMP-dependent synthetase and ligase [Polaromonas naphthalenivorans
CJ2]
Length = 579
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 81/176 (46%), Gaps = 38/176 (21%)
Query: 14 LSSSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRY 72
L + K++D + IV G GE RG+ M GYW+D +T E+I D W+ TG
Sbjct: 393 LVQPHLEIKIIDPESGEIVLPGVSGEFCTRGYSVMHGYWDDPARTAESIDADGWMHTGDL 452
Query: 73 KKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGG 132
F +GY +VGRIKDM+IRGG
Sbjct: 453 ATMDF-------------------------------------EGYVNIVGRIKDMVIRGG 475
Query: 133 ENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
ENIYP+EIEEF+ HP V + G+PD+R GEE+ I + L+ E ++
Sbjct: 476 ENIYPREIEEFLYRHPKVQDVQVVGLPDKRYGEELCAWIVTRPGETLSEDEIRAFC 531
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 58/81 (71%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
+GY +VGRIKDM+IRGGENIYP+EIEEF+ HP V + G+PD+R GEE+ I +
Sbjct: 458 EGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPKVQDVQVVGLPDKRYGEELCAWIVTR 517
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
L+ D+IR FCKG+++ +
Sbjct: 518 PGETLSEDEIRAFCKGQIAHY 538
>gi|338983710|ref|ZP_08632875.1| AMP-dependent synthetase and ligase [Acidiphilium sp. PM]
gi|338207360|gb|EGO95332.1| AMP-dependent synthetase and ligase [Acidiphilium sp. PM]
Length = 550
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 71/147 (48%), Gaps = 37/147 (25%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ KV+D RIV G GEL RG+ MLGYW + KT E I W+ TG
Sbjct: 376 LEVKVIDAEGRIVKRGERGELCTRGYSVMLGYWGNAAKTAEAIDAAGWMHTG-------- 427
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E+GY +VGR KD++IRGGENIYP+
Sbjct: 428 -----------------------------DLGVIDEEGYCTIVGRSKDVVIRGGENIYPR 458
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGE 165
E+EEF+ THP + +G+ D + GE
Sbjct: 459 EVEEFLFTHPRIASVAVFGIADAKWGE 485
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 388 DSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYG 447
D+AG + D V+ E+GY +VGR KD++IRGGENIYP+E+EEF+ THP + +G
Sbjct: 419 DAAG-WMHTGDLGVIDEEGYCTIVGRSKDVVIRGGENIYPREVEEFLFTHPRIASVAVFG 477
Query: 448 VPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ D + GE +K L ++ FC+G+++ +
Sbjct: 478 IADAKWGEVPCAWVKPNPGETLTPAEVVGFCEGRIAHY 515
>gi|148261347|ref|YP_001235474.1| AMP-dependent synthetase and ligase [Acidiphilium cryptum JF-5]
gi|146403028|gb|ABQ31555.1| AMP-dependent synthetase and ligase [Acidiphilium cryptum JF-5]
Length = 550
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 71/147 (48%), Gaps = 37/147 (25%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ KV+D RIV G GEL RG+ MLGYW + KT E I W+ TG
Sbjct: 376 LEVKVIDAEGRIVKRGERGELCTRGYSVMLGYWGNAAKTAEAIDAAGWMHTG-------- 427
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E+GY +VGR KD++IRGGENIYP+
Sbjct: 428 -----------------------------DLGVIDEEGYCTIVGRSKDVVIRGGENIYPR 458
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGE 165
E+EEF+ THP + +G+ D + GE
Sbjct: 459 EVEEFLFTHPRIASVAVFGIADAKWGE 485
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 388 DSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYG 447
D+AG + D V+ E+GY +VGR KD++IRGGENIYP+E+EEF+ THP + +G
Sbjct: 419 DAAG-WMHTGDLGVIDEEGYCTIVGRSKDVVIRGGENIYPREVEEFLFTHPRIASVAVFG 477
Query: 448 VPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ D + GE +K L ++ FC+G+++ +
Sbjct: 478 IADAKWGEVPCAWVKPNPGETLTPAEVVGFCEGRIAHY 515
>gi|73670286|ref|YP_306301.1| AMP-binding protein [Methanosarcina barkeri str. Fusaro]
gi|72397448|gb|AAZ71721.1| long-chain fatty-acid-CoA ligase [Methanosarcina barkeri str.
Fusaro]
Length = 552
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 88/176 (50%), Gaps = 40/176 (22%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHN-NRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ S + +VVD + N VP T GE+ RG+ M GY++ ++TK+ I
Sbjct: 353 DPLELRVETVGKHFPSVEVRVVDPDTNEPVPLNTVGEICCRGYNVMKGYYKMPEETKKVI 412
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL +G D E+GY ++
Sbjct: 413 DEDGWLHSG-------------------------------------DLGTCDENGYYRIT 435
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
GRIKDMIIRGGENIYP+EIEE + T P + + G+PD++ GE VG + LK+ A
Sbjct: 436 GRIKDMIIRGGENIYPREIEELLLTMPEITDVQVVGIPDKKYGEIVGAFVILKKGA 491
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
E+GY ++ GRIKDMIIRGGENIYP+EIEE + T P + + G+PD++ GE VG + L
Sbjct: 428 ENGYYRITGRIKDMIIRGGENIYPREIEELLLTMPEITDVQVVGIPDKKYGEIVGAFVIL 487
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
K+ A DIR + KV+++
Sbjct: 488 KKGADFTEVDIRDYALSKVARY 509
>gi|332882818|ref|ZP_08450429.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679320|gb|EGJ52306.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 545
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 82/173 (47%), Gaps = 38/173 (21%)
Query: 19 FQAKVVDHNNR-IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+++ + IVP G GEL RG+ ML YW Q T + I RW+ +G
Sbjct: 366 IEIKIINPETKAIVPRGESGELCTRGYSVMLKYWNSPQATAQVIDEQRWMHSG------- 418
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D ++ EDGY + GRIKD+IIRGGENI P
Sbjct: 419 ------------------------------DLAMMDEDGYIHISGRIKDLIIRGGENISP 448
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
KEIE+F+ T+ V++A GVP ++ GEEV IK E L E ++ D
Sbjct: 449 KEIEDFLYTYEGVMDAQVIGVPSKKFGEEVMAWIKPNEGVTLTEEELRNFCKD 501
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 392 RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDE 451
R + D ++ EDGY + GRIKD+IIRGGENI PKEIE+F+ T+ V++A GVP +
Sbjct: 413 RWMHSGDLAMMDEDGYIHISGRIKDLIIRGGENISPKEIEDFLYTYEGVMDAQVIGVPSK 472
Query: 452 RMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ GEEV IK E L +++R FCK +++ +
Sbjct: 473 KFGEEVMAWIKPNEGVTLTEEELRNFCKDRIAHY 506
>gi|295706985|ref|YP_003600060.1| AMP-binding protein [Bacillus megaterium DSM 319]
gi|294804644|gb|ADF41710.1| AMP-binding enzyme domain protein [Bacillus megaterium DSM 319]
Length = 528
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Query: 375 KKYLREEENITVPDSAGRSIFEK-----DQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 429
K YL + +P+ ++I + D + +DGY ++ GR+KDMIIRGGENIYP+E
Sbjct: 379 KGYLTMKGYYKMPEETEKTIVKGWLHTGDLATIDKDGYVKITGRLKDMIIRGGENIYPRE 438
Query: 430 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
IEEF+ P V + G+PD + GE V IKLK+++ L A +I+ FCKGK++ F
Sbjct: 439 IEEFLYRIPEVEDVQIVGIPDPKYGERVAACIKLKQHSFLTAQEIKDFCKGKLAHF 494
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 77/153 (50%), Gaps = 38/153 (24%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
FG GEL +G+ M GY++ ++T++TI WL TG
Sbjct: 370 FGEQGELCAKGYLTMKGYYKMPEETEKTI-VKGWLHTG---------------------- 406
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
D + +DGY ++ GR+KDMIIRGGENIYP+EIEEF+ P V +
Sbjct: 407 ---------------DLATIDKDGYVKITGRLKDMIIRGGENIYPREIEEFLYRIPEVED 451
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYEDK 185
G+PD + GE V IKLK+++ L A E K
Sbjct: 452 VQIVGIPDPKYGERVAACIKLKQHSFLTAQEIK 484
>gi|395646175|ref|ZP_10434035.1| AMP-dependent synthetase and ligase [Methanofollis liminatans DSM
4140]
gi|395442915|gb|EJG07672.1| AMP-dependent synthetase and ligase [Methanofollis liminatans DSM
4140]
Length = 566
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 79/149 (53%), Gaps = 38/149 (25%)
Query: 20 QAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K++D N RI+P G GE+ RG+ +M Y+ + T+ T+ + WL TG
Sbjct: 383 EIKIIDPNTKRILPRGEVGEICARGYMSMKCYYNNPSATRATLDANGWLYTG-------- 434
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E+GY ++ GR+K+M+IRGGENIYP+
Sbjct: 435 -----------------------------DLGVMDEEGYVKMSGRLKEMVIRGGENIYPR 465
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
EIEEF+ HP + +AY GVPDER GEE+
Sbjct: 466 EIEEFLHHHPKISDAYVIGVPDERYGEEL 494
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 65/92 (70%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
++ D V+ E+GY ++ GR+K+M+IRGGENIYP+EIEEF+ HP + +AY GVPDER
Sbjct: 431 LYTGDLGVMDEEGYVKMSGRLKEMVIRGGENIYPREIEEFLHHHPKISDAYVIGVPDERY 490
Query: 454 GEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
GEE+ + K + D+I +FC G+++++
Sbjct: 491 GEELMAWVAAKPGMTVTPDEIISFCNGQIARY 522
>gi|288962477|ref|YP_003452772.1| fatty-acyl-CoA synthase [Azospirillum sp. B510]
gi|288914743|dbj|BAI76228.1| fatty-acyl-CoA synthase [Azospirillum sp. B510]
Length = 541
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 38/165 (23%)
Query: 20 QAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ KV+D + VPFG GE+ RG+ M GY++D T + PD WL TG
Sbjct: 369 EVKVIDQATGKTVPFGVSGEICTRGYLTMKGYFDDPVATAAALDPDGWLHTG-------- 420
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + GY ++ GR+KDMIIRGGEN++P+
Sbjct: 421 -----------------------------DLGSMDVHGYCRIHGRLKDMIIRGGENVFPR 451
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
EIEE + THP+V++ G+PD GE V +++K++ + +A E
Sbjct: 452 EIEEILFTHPSVVDVAVVGLPDPEWGEVVAAFVRVKDDHRPSAEE 496
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 58/80 (72%)
Query: 406 GYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
GY ++ GR+KDMIIRGGEN++P+EIEE + THP+V++ G+PD GE V +++K+
Sbjct: 429 GYCRIHGRLKDMIIRGGENVFPREIEEILFTHPSVVDVAVVGLPDPEWGEVVAAFVRVKD 488
Query: 466 NAKLNADDIRTFCKGKVSKF 485
+ + +A+++ FC+ ++ F
Sbjct: 489 DHRPSAEELDAFCRNHLASF 508
>gi|77459877|ref|YP_349384.1| AMP-binding protein [Pseudomonas fluorescens Pf0-1]
gi|77383880|gb|ABA75393.1| putative long-chain-fatty-acid--CoA ligase [Pseudomonas fluorescens
Pf0-1]
Length = 565
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 79/168 (47%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D VP GT GEL RG+ MLGYW + T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNPVPRGTIGELCTRGYSVMLGYWNNPNATAEAIDAAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF THP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 388 DSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYG 447
D+AG + D + ++GY + GR KDMIIRGGENIYP+E+EEF THP V + G
Sbjct: 431 DAAGW-MHTGDLASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 489
Query: 448 VPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+P R GEE+ IK +++ +CK +++ F
Sbjct: 490 IPCSRYGEEIVAWIKFHPGHSATEQELQAWCKERIAHF 527
>gi|220929281|ref|YP_002506190.1| AMP-dependent synthetase and ligase [Clostridium cellulolyticum
H10]
gi|219999609|gb|ACL76210.1| AMP-dependent synthetase and ligase [Clostridium cellulolyticum
H10]
Length = 554
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 78/163 (47%), Gaps = 38/163 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD N+ +P G PGE + RG+ M GY++ + T + I D WL TG
Sbjct: 370 IECKIVDPETNQDLPDGVPGEFVARGYNIMKGYYKMPEATAQAIDADGWLHTG------- 422
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D E+GY ++ GRIKDMIIRGGENIYP
Sbjct: 423 ------------------------------DLATRDENGYYKITGRIKDMIIRGGENIYP 452
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
KEIEEF+ T P + + GVP + GEE+ I LKE L
Sbjct: 453 KEIEEFLYTLPEIKDVQVIGVPSKVYGEEIMACIILKEGCSLT 495
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 53/81 (65%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
E+GY ++ GRIKDMIIRGGENIYPKEIEEF+ T P + + GVP + GEE+ I L
Sbjct: 429 ENGYYKITGRIKDMIIRGGENIYPKEIEEFLYTLPEIKDVQVIGVPSKVYGEEIMACIIL 488
Query: 464 KENAKLNADDIRTFCKGKVSK 484
KE L + ++ K +++
Sbjct: 489 KEGCSLTEEQVKEAVKANMAR 509
>gi|408383162|ref|ZP_11180700.1| AMP-binding domain protein [Methanobacterium formicicum DSM 3637]
gi|407814080|gb|EKF84717.1| AMP-binding domain protein [Methanobacterium formicicum DSM 3637]
Length = 553
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 62/82 (75%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
E+GY +VGRIKDMIIRGGENIYP+EIEEF+ T P VL+ G+ DE+ GE VG I L
Sbjct: 428 EEGYYSIVGRIKDMIIRGGENIYPREIEEFLYTMPGVLDVQVVGISDEKYGEIVGACIIL 487
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
+E+A+L +D+R + + K+++F
Sbjct: 488 EEDAELTEEDVRDYARTKIARF 509
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 74/144 (51%), Gaps = 37/144 (25%)
Query: 37 GELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQ 96
GE+ +G+ M GY++ KT+E I D WL +G
Sbjct: 388 GEICCKGYNVMKGYYKMPDKTREVIDEDGWLHSG-------------------------- 421
Query: 97 QQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAY 156
D + E+GY +VGRIKDMIIRGGENIYP+EIEEF+ T P VL+
Sbjct: 422 -----------DLASVDEEGYYSIVGRIKDMIIRGGENIYPREIEEFLYTMPGVLDVQVV 470
Query: 157 GVPDERMGEEVGISIKLKENAKLN 180
G+ DE+ GE VG I L+E+A+L
Sbjct: 471 GISDEKYGEIVGACIILEEDAELT 494
>gi|407276381|ref|ZP_11104851.1| AMP-dependent synthetase and ligase [Rhodococcus sp. P14]
Length = 552
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 86/170 (50%), Gaps = 39/170 (22%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD ++ +VP G GE+ RG+ MLGY + +T TI D WLR G
Sbjct: 357 LEVKIVDPFSDEVVPVGEQGEVCCRGYQVMLGYSDMPDETAATIDADGWLRMG------- 409
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ G+ Q+ GR+K+MIIRGG NIYP
Sbjct: 410 ------------------------------DLGVMDRRGFLQITGRLKEMIIRGGLNIYP 439
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE-NAKLNAYEDKS 186
+EIEE + HP V E GVPDE+ GE++G +++K+ ++ +A E KS
Sbjct: 440 REIEELLYRHPAVAEVAIIGVPDEKWGEQIGAVVRVKDPDSPPSAAELKS 489
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ G+ Q+ GR+K+MIIRGG NIYP+EIEE + HP V E GVPDE+ GE++
Sbjct: 410 DLGVMDRRGFLQITGRLKEMIIRGGLNIYPREIEELLYRHPAVAEVAIIGVPDEKWGEQI 469
Query: 458 GISIKLKE-NAKLNADDIRTFCKGKVSK 484
G +++K+ ++ +A +++++ + +++
Sbjct: 470 GAVVRVKDPDSPPSAAELKSWLRERLAA 497
>gi|323702368|ref|ZP_08114033.1| AMP-dependent synthetase and ligase [Desulfotomaculum nigrificans
DSM 574]
gi|323532674|gb|EGB22548.1| AMP-dependent synthetase and ligase [Desulfotomaculum nigrificans
DSM 574]
Length = 554
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 91/185 (49%), Gaps = 40/185 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P DL+ +T+ + + +AK++D P G GE+ RG+ M GY++ + T + I
Sbjct: 354 DPIDLRVTTVGRTIPNVEAKILDPETGAECPPGVQGEICARGYNVMKGYYKMPEATAQAI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ WL TG D V+ +GY ++
Sbjct: 414 DANGWLHTG-------------------------------------DLGVMDHNGYFKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ THP V + GVP + GEEV I+ KE A L
Sbjct: 437 GRLKDMIIRGGENIYPREIEEFLYTHPLVKDVQVVGVPSAKYGEEVLAFIQPKEGANLTK 496
Query: 182 YEDKS 186
E ++
Sbjct: 497 EEIQA 501
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +GY ++ GR+KDMIIRGGENIYP+EIEEF+ THP V + GVP + GEEV
Sbjct: 423 DLGVMDHNGYFKITGRLKDMIIRGGENIYPREIEEFLYTHPLVKDVQVVGVPSAKYGEEV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+ KE A L ++I+ +C+ K++K+
Sbjct: 483 LAFIQPKEGANLTKEEIQAYCQNKIAKY 510
>gi|395005400|ref|ZP_10389282.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acidovorax
sp. CF316]
gi|394316643|gb|EJE53356.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acidovorax
sp. CF316]
Length = 564
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 37/164 (22%)
Query: 23 VVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAM 82
+ + I+P G GEL RG+ M GYWED KT E I + W+ +G
Sbjct: 388 IAPESGEILPVGAVGELCTRGYSVMRGYWEDAAKTSEAIDAEGWMHSG------------ 435
Query: 83 AIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEE 142
D + +GY + GRIKD++IRGGEN+YP+E+EE
Sbjct: 436 -------------------------DLATIDGNGYVNIAGRIKDLVIRGGENVYPREVEE 470
Query: 143 FIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
F+ H + + GVPD++ GEE+ + L++ A L+ E +S
Sbjct: 471 FLYRHSAIQDVQVIGVPDQKYGEELCAWVVLRDGATLSEDELRS 514
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY + GRIKD++IRGGEN+YP+E+EEF+ H + + GVPD++ GEE+
Sbjct: 436 DLATIDGNGYVNIAGRIKDLVIRGGENVYPREVEEFLYRHSAIQDVQVIGVPDQKYGEEL 495
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ L++ A L+ D++R+FC+G+++ +
Sbjct: 496 CAWVVLRDGATLSEDELRSFCRGQIAHY 523
>gi|298528111|ref|ZP_07015515.1| AMP-dependent synthetase and ligase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511763|gb|EFI35665.1| AMP-dependent synthetase and ligase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 550
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Query: 386 VPDSAGRSI------FEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
+P+ R+I D V+ EDGY + GR+KDMIIRGGEN+YP+EIEEF+ T
Sbjct: 407 MPEETSRTIDADGWLHSGDLGVMDEDGYLSITGRLKDMIIRGGENVYPREIEEFLYTMEG 466
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
V + GVP R GEEVG I LKE +DIR FC+G+++++
Sbjct: 467 VRDVQVVGVPSNRYGEEVGAFIILKEGYDYAPEDIRDFCRGRIARY 512
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 76/159 (47%), Gaps = 38/159 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ +VVD NR + G GE+ RG+ M GY+ ++T TI D WL +G
Sbjct: 372 IEVQVVDPETNRTLGPGEQGEVCCRGYNVMRGYYNMPEETSRTIDADGWLHSG------- 424
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ EDGY + GR+KDMIIRGGEN+YP
Sbjct: 425 ------------------------------DLGVMDEDGYLSITGRLKDMIIRGGENVYP 454
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
+EIEEF+ T V + GVP R GEEVG I LKE
Sbjct: 455 REIEEFLYTMEGVRDVQVVGVPSNRYGEEVGAFIILKEG 493
>gi|333924075|ref|YP_004497655.1| long-chain-fatty-acid--CoA ligase [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749636|gb|AEF94743.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 554
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 91/185 (49%), Gaps = 40/185 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P DL+ +T+ + + +AK++D P G GE+ RG+ M GY++ + T + I
Sbjct: 354 DPIDLRVTTVGRTIPNVEAKILDPETGAECPPGVQGEICARGYNVMKGYYKMPEATAQAI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ WL TG D V+ +GY ++
Sbjct: 414 DANGWLHTG-------------------------------------DLGVMDHNGYFKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ THP V + GVP + GEEV I+ KE A L
Sbjct: 437 GRLKDMIIRGGENIYPREIEEFLYTHPLVKDVQVVGVPSAKYGEEVLAFIQPKEGANLTK 496
Query: 182 YEDKS 186
E ++
Sbjct: 497 EEIQA 501
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +GY ++ GR+KDMIIRGGENIYP+EIEEF+ THP V + GVP + GEEV
Sbjct: 423 DLGVMDHNGYFKITGRLKDMIIRGGENIYPREIEEFLYTHPLVKDVQVVGVPSAKYGEEV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+ KE A L ++I+ +C+ K++K+
Sbjct: 483 LAFIQPKEGANLTKEEIQAYCQNKIAKY 510
>gi|376261461|ref|YP_005148181.1| acyl-CoA synthetase [Clostridium sp. BNL1100]
gi|373945455|gb|AEY66376.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Clostridium
sp. BNL1100]
Length = 554
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 87/176 (49%), Gaps = 40/176 (22%)
Query: 8 DLQFSTLSSSS--FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPD 64
+L+ ST+ + + K+VD N+ +P G PGE + RG+ M GY++ + T + I D
Sbjct: 357 ELRVSTVGRALPFIECKIVDPETNQDLPDGVPGEFVARGYNVMKGYYKMPEATAQAIDDD 416
Query: 65 RWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRI 124
WL TG +A R E+GY ++ GRI
Sbjct: 417 GWLHTGD----------LATRD---------------------------ENGYYKITGRI 439
Query: 125 KDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
KDMIIRGGENIYPKEIEEF+ T P + + GVP + GEE+ I LKE L
Sbjct: 440 KDMIIRGGENIYPKEIEEFLYTLPEIKDVQVIGVPSKVYGEEIMACIILKEGCVLT 495
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 53/81 (65%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
E+GY ++ GRIKDMIIRGGENIYPKEIEEF+ T P + + GVP + GEE+ I L
Sbjct: 429 ENGYYKITGRIKDMIIRGGENIYPKEIEEFLYTLPEIKDVQVIGVPSKVYGEEIMACIIL 488
Query: 464 KENAKLNADDIRTFCKGKVSK 484
KE L + ++ K +++
Sbjct: 489 KEGCVLTEEQVKEAVKANMAR 509
>gi|121611197|ref|YP_999004.1| AMP-dependent synthetase and ligase [Verminephrobacter eiseniae
EF01-2]
gi|121555837|gb|ABM59986.1| AMP-dependent synthetase and ligase [Verminephrobacter eiseniae
EF01-2]
Length = 524
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 4 MNPTDLQFSTLS-SSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
MNP + ++ +S A VVD V G GEL+I G M GY+++E T+ +
Sbjct: 338 MNPAARKPGSVGRASGCMAGVVDAALAAVRNGVTGELVISGPNVMPGYYKNEPATRASFT 397
Query: 63 PDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVG 122
PD WLRTG + GFF+ V G
Sbjct: 398 PDGWLRTGDLG---------------------HRDADGFFF----------------VTG 420
Query: 123 RIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAY 182
RIK++II+GGENI P+EI+E + HP VL+ A GVPD G+E+G+ I L+
Sbjct: 421 RIKELIIKGGENIAPREIDEALLRHPAVLDVAAVGVPDRHYGQEIGVCIVLRAGMSCTQE 480
Query: 183 EDKSISS 189
E ++ S+
Sbjct: 481 ELRAFSA 487
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DG+ V GRIK++II+GGENI P+EI+E + HP VL+ A GVPD G+E+G+ I L+
Sbjct: 413 DGFFFVTGRIKELIIKGGENIAPREIDEALLRHPAVLDVAAVGVPDRHYGQEIGVCIVLR 472
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+++R F + ++
Sbjct: 473 AGMSCTQEELRAFSAAALGRY 493
>gi|389817941|ref|ZP_10208454.1| AMP-binding domain protein [Planococcus antarcticus DSM 14505]
gi|388464231|gb|EIM06564.1| AMP-binding domain protein [Planococcus antarcticus DSM 14505]
Length = 547
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 85/171 (49%), Gaps = 38/171 (22%)
Query: 17 SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKT 75
+ + K++D +V G PGEL RG+ M GY+++E+ TK + + WL TG
Sbjct: 367 TEVEVKIIDPATGEVVEIGIPGELCTRGYHVMKGYYKNEEATKTAVDREGWLHTG----- 421
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
D V E+ Y + GRIKDM+IRGGENI
Sbjct: 422 --------------------------------DIAVQDEEDYIAITGRIKDMVIRGGENI 449
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
YP+EIEEF+ HP++ + GVPD + GEE+ + LK+ +L+ E K+
Sbjct: 450 YPREIEEFLYQHPSIQDVQVVGVPDPKYGEELMAWVILKKGEQLSVEELKA 500
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 73/118 (61%), Gaps = 3/118 (2%)
Query: 369 ARIYHYKK--YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIY 426
R YH K Y EE T D G + D V E+ Y + GRIKDM+IRGGENIY
Sbjct: 392 TRGYHVMKGYYKNEEATKTAVDREGW-LHTGDIAVQDEEDYIAITGRIKDMVIRGGENIY 450
Query: 427 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
P+EIEEF+ HP++ + GVPD + GEE+ + LK+ +L+ ++++ +CKGK+S+
Sbjct: 451 PREIEEFLYQHPSIQDVQVVGVPDPKYGEELMAWVILKKGEQLSVEELKAYCKGKISR 508
>gi|380486480|emb|CCF38673.1| AMP-binding enzyme [Colletotrichum higginsianum]
Length = 575
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 81/169 (47%), Gaps = 41/169 (24%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR----WLRTGRYKKT 75
AK+VD + IVP G GEL + G+ GYW + +KT E + D WL TG
Sbjct: 383 SAKIVDRDGNIVPMGQRGELCMAGYQLQAGYWNNSEKTNEVMVRDAAGVLWLHTG----- 437
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
D+ V +DGY + GR KD+IIRGGENI
Sbjct: 438 --------------------------------DEAVFDDDGYCSITGRFKDIIIRGGENI 465
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
YP EIEE + HP++ +A G+ DE GE VG ++ EN++ +++
Sbjct: 466 YPLEIEERLMAHPSISQAIVVGLKDEHYGEVVGAFVQRAENSEKPTFQE 514
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 384 ITVPDSAGRS-IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 442
+ V D+AG + D+ V +DGY + GR KD+IIRGGENIYP EIEE + HP++ +
Sbjct: 423 VMVRDAAGVLWLHTGDEAVFDDDGYCSITGRFKDIIIRGGENIYPLEIEERLMAHPSISQ 482
Query: 443 AYAYGVPDERMGEEVGISIKLKENAK 468
A G+ DE GE VG ++ EN++
Sbjct: 483 AIVVGLKDEHYGEVVGAFVQRAENSE 508
>gi|336467272|gb|EGO55436.1| hypothetical protein NEUTE1DRAFT_102863 [Neurospora tetrasperma
FGSC 2508]
gi|350288099|gb|EGZ69335.1| acetyl-CoA synthetase-like protein [Neurospora tetrasperma FGSC
2509]
Length = 580
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 87/186 (46%), Gaps = 43/186 (23%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D++ +T+ + AK+VD + +IVP GT GEL I G+ GYW + +KT E +
Sbjct: 372 DPIDVRLTTVGTLMPHAHAKIVDRDGQIVPIGTKGELCIGGYQLQAGYWNNSEKTNEVMM 431
Query: 63 PDR----WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYG 118
D WL TG D+ V E GY
Sbjct: 432 RDESGMLWLHTG-------------------------------------DEAVFNEQGYC 454
Query: 119 QVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+ GR KD+IIRGGENIYP EIEE + HP + A G+ D+ GE VG + L+ +
Sbjct: 455 SITGRFKDIIIRGGENIYPLEIEERLVAHPAISMAVVVGLKDQHYGEVVGAFLGLENGHR 514
Query: 179 LNAYED 184
+ E+
Sbjct: 515 PMSTEE 520
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ V E GY + GR KD+IIRGGENIYP EIEE + HP + A G+ D+ GE V
Sbjct: 444 DEAVFNEQGYCSITGRFKDIIIRGGENIYPLEIEERLVAHPAISMAVVVGLKDQHYGEVV 503
Query: 458 GISIKLKENAK-LNADDIRTFCKGKVSK 484
G + L+ + ++ +++R +C+ K+ K
Sbjct: 504 GAFLGLENGHRPMSTEEMREWCRRKLGK 531
>gi|338997821|ref|ZP_08636508.1| long-chain-fatty-acid--CoA ligase [Halomonas sp. TD01]
gi|338765282|gb|EGP20227.1| long-chain-fatty-acid--CoA ligase [Halomonas sp. TD01]
Length = 556
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 41/180 (22%)
Query: 5 NPTD-LQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
NPT+ +Q T+ + KV+D + V G PGEL ++G M GYW+ E +T+ +I
Sbjct: 368 NPTNAIQLGTIGKPVAGTAVKVIDADGNDVAMGEPGELCVQGPQVMKGYWQREDETRNSI 427
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ W TG D +L++DGY ++V
Sbjct: 428 DENGWFHTG-------------------------------------DIAILQDDGYIKIV 450
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
R KDMI+ G N+YP EIE+ + HP+VLE+ A GVPDE GE + + + + +N++L+A
Sbjct: 451 DRKKDMILVSGFNVYPNEIEDVVAAHPDVLESAAVGVPDEDAGEAIKLFV-VSKNSELDA 509
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D +L++DGY ++V R KDMI+ G N+YP EIE+ + HP+VLE+ A GVPDE GE +
Sbjct: 437 DIAILQDDGYIKIVDRKKDMILVSGFNVYPNEIEDVVAAHPDVLESAAVGVPDEDAGEAI 496
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ + + +N++L+A+ +R +CK +++ +
Sbjct: 497 KLFV-VSKNSELDAETLRKWCKKELTGY 523
>gi|424862370|ref|ZP_18286316.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356660842|gb|EHI41206.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 503
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 37/173 (21%)
Query: 9 LQFSTLSSSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLR 68
+ F+ + + +V DH+N P GT GE+ ++G M GYW T + D WLR
Sbjct: 312 IGFTGRAVPRLEVQVRDHDNTACPPGTVGEVFVKGATVMKGYWNRPSDTAAVLDSDGWLR 371
Query: 69 TGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMI 128
TG D + DG ++V R+KD+I
Sbjct: 372 TG-------------------------------------DLGEIDADGDLRIVDRVKDLI 394
Query: 129 IRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
IRGG N+YP E+EE + THP++LEA GVPD+ GEEV + + L+
Sbjct: 395 IRGGYNVYPSEVEEVLYTHPDILEAAVVGVPDDHYGEEVAAVVATVPGSGLDG 447
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 54/81 (66%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DG ++V R+KD+IIRGG N+YP E+EE + THP++LEA GVPD+ GEEV +
Sbjct: 381 DGDLRIVDRVKDLIIRGGYNVYPSEVEEVLYTHPDILEAAVVGVPDDHYGEEVAAVVATV 440
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+ L+ D+ ++ + ++S +
Sbjct: 441 PGSGLDGGDLTSWARERLSAY 461
>gi|423197997|ref|ZP_17184580.1| hypothetical protein HMPREF1171_02612 [Aeromonas hydrophila SSU]
gi|404630808|gb|EKB27458.1| hypothetical protein HMPREF1171_02612 [Aeromonas hydrophila SSU]
Length = 564
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 91/186 (48%), Gaps = 39/186 (20%)
Query: 6 PTDLQFSTLSSS--SFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGP 63
P D + +T+ + + K+VD + IV G GE+ R + M GYW+D KT +TI
Sbjct: 368 PLDKRVTTVGRAIGHTEIKLVDPSGEIVAIGERGEICCRSNGVMQGYWQDPAKTADTIDE 427
Query: 64 DRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGR 123
+ WL +G D ++ E+GY ++VGR
Sbjct: 428 EGWLHSG-------------------------------------DIGIMDEEGYVRIVGR 450
Query: 124 IKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
K++IIRGGENIYP+EIEE + HP V +A +GV ER GEEV +KL+ + + E
Sbjct: 451 SKELIIRGGENIYPREIEERLYDHPAVQDAAVFGVDSERYGEEVCAWVKLRPRQEASEEE 510
Query: 184 DKSISS 189
K S
Sbjct: 511 LKQFLS 516
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E+GY ++VGR K++IIRGGENIYP+EIEE + HP V +A +GV ER GEEV
Sbjct: 435 DIGIMDEEGYVRIVGRSKELIIRGGENIYPREIEERLYDHPAVQDAAVFGVDSERYGEEV 494
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+KL+ + + ++++ F +++ F
Sbjct: 495 CAWVKLRPRQEASEEELKQFLSARIAYF 522
>gi|359395582|ref|ZP_09188634.1| Long-chain-fatty-acid--CoA ligase [Halomonas boliviensis LC1]
gi|357969847|gb|EHJ92294.1| Long-chain-fatty-acid--CoA ligase [Halomonas boliviensis LC1]
Length = 556
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 44/186 (23%)
Query: 5 NPTD-LQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
NP D +Q T+ + KVVD + +P G PGEL ++G M GYW+ E +T+ +I
Sbjct: 368 NPNDAIQLGTIGKPVAGTAVKVVDTDGNDLPMGEPGELCVQGPQVMKGYWQREDETRASI 427
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ W TG D VL++DGY ++V
Sbjct: 428 DDNGWFFTG-------------------------------------DIAVLQDDGYIRIV 450
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
R KDMI+ G N+YP EIE+ + HP+VLE+ A GVPDE GE +IKL +K +
Sbjct: 451 DRKKDMILVSGFNVYPNEIEDVVAAHPDVLESAAVGVPDENAGE----AIKLFVVSKNDQ 506
Query: 182 YEDKSI 187
++K++
Sbjct: 507 LDEKTL 512
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 379 REEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHP 438
RE+E D G F D VL++DGY ++V R KDMI+ G N+YP EIE+ + HP
Sbjct: 419 REDETRASIDDNGW-FFTGDIAVLQDDGYIRIVDRKKDMILVSGFNVYPNEIEDVVAAHP 477
Query: 439 NVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+VLE+ A GVPDE GE + + + + +N +L+ +R +CK +++ +
Sbjct: 478 DVLESAAVGVPDENAGEAIKLFV-VSKNDQLDEKTLRDWCKKELTGY 523
>gi|322710503|gb|EFZ02077.1| hypothetical protein MAA_01659 [Metarhizium anisopliae ARSEF 23]
Length = 579
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 94/215 (43%), Gaps = 57/215 (26%)
Query: 21 AKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR----WLRTGRYKKTS 76
AK+VD RIVP G GE+ G+ GY ++ +KT E + D W+ TG
Sbjct: 383 AKIVDSRGRIVPRGIRGEICTSGYALQKGYLKNAEKTAEVMRADSDGVVWMHTG------ 436
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
D+ V+ E GY +V GRIKDMIIRGGENI
Sbjct: 437 -------------------------------DEGVIDEQGYCRVTGRIKDMIIRGGENII 465
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSDYHEFET 196
P EIEE + H V+EA G+PDER GE V ++ KE +D I+ +
Sbjct: 466 PTEIEERLLAHACVVEASVIGLPDERYGEAVACFLRQKEACPRP--DDAGIARWVQQTLG 523
Query: 197 MYDSIMAHPNRTTPYYQWWSYDPNQSYVTHDNGFP 231
+ + P Y +W DP V HD FP
Sbjct: 524 RHKA---------PRYVYWIGDPG---VGHD--FP 544
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 375 KKYLREEEN---ITVPDSAGRS-IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEI 430
K YL+ E + DS G + D+ V+ E GY +V GRIKDMIIRGGENI P EI
Sbjct: 410 KGYLKNAEKTAEVMRADSDGVVWMHTGDEGVIDEQGYCRVTGRIKDMIIRGGENIIPTEI 469
Query: 431 EEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 465
EE + H V+EA G+PDER GE V ++ KE
Sbjct: 470 EERLLAHACVVEASVIGLPDERYGEAVACFLRQKE 504
>gi|419968336|ref|ZP_14484187.1| AMP-dependent synthetase/ligase [Rhodococcus opacus M213]
gi|432340210|ref|ZP_19589665.1| AMP-dependent synthetase/ligase [Rhodococcus wratislaviensis IFP
2016]
gi|414566246|gb|EKT77088.1| AMP-dependent synthetase/ligase [Rhodococcus opacus M213]
gi|430774738|gb|ELB90313.1| AMP-dependent synthetase/ligase [Rhodococcus wratislaviensis IFP
2016]
Length = 506
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 37/175 (21%)
Query: 9 LQFSTLSSSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLR 68
+ F+ + + +V DH+N P G+ GE+ ++G M GYW T + D WLR
Sbjct: 315 IGFTGRAVPRLEVQVRDHDNTACPPGSVGEVFVKGATVMKGYWNRPSDTAAVLDSDGWLR 374
Query: 69 TGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMI 128
TG D + DG ++V R+KD+I
Sbjct: 375 TG-------------------------------------DLGEIDADGDLRIVDRVKDLI 397
Query: 129 IRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
IRGG N+YP E+EE + THP++LEA GVPD+ GEEV + + L+ E
Sbjct: 398 IRGGYNVYPSEVEEVLYTHPDILEAAVVGVPDDHYGEEVAAVVATVPGSGLDGGE 452
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DG ++V R+KD+IIRGG N+YP E+EE + THP++LEA GVPD+ GEEV +
Sbjct: 384 DGDLRIVDRVKDLIIRGGYNVYPSEVEEVLYTHPDILEAAVVGVPDDHYGEEVAAVVATV 443
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+ L+ ++ ++ + ++S +
Sbjct: 444 PGSGLDGGELTSWARERLSAY 464
>gi|388601232|ref|ZP_10159628.1| AMP-binding domain protein [Vibrio campbellii DS40M4]
Length = 563
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 80/161 (49%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ KV++ N I T GEL RG+C MLGYW DE+KT TI + WL +G
Sbjct: 385 EVKVINLNGNIAERNTIGELCTRGYCVMLGYWNDEEKTSNTIDSEGWLHSG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ ++GY +VGR KD+IIRGGENI+P++
Sbjct: 436 ----------------------------DLAVMDDEGYLSIVGRSKDLIIRGGENIFPRD 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+ + + + +GV D+ GE+V IKL + K++
Sbjct: 468 IEDVLHGLETIEDVAVFGVADDYYGEKVCAWIKLAQGHKVS 508
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 380 EEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
EE+ DS G + D V+ ++GY +VGR KD+IIRGGENI+P++IE+ +
Sbjct: 419 EEKTSNTIDSEGW-LHSGDLAVMDDEGYLSIVGRSKDLIIRGGENIFPRDIEDVLHGLET 477
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ + +GV D+ GE+V IKL + K++ DDI+ + +++ F
Sbjct: 478 IEDVAVFGVADDYYGEKVCAWIKLAQGHKVSEDDIKVYLSERIAHF 523
>gi|222875330|gb|EEF12461.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 83/179 (46%), Gaps = 40/179 (22%)
Query: 5 NPTDLQFSTLSSSS--FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P + + ST+ + K+VD +V G GEL RG+ M GYW DE +T+E I
Sbjct: 33 TPLERRVSTVGKVQPHLEVKIVDPATGEVVAPGVSGELCTRGYSVMHGYWGDEARTREAI 92
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ TG D + E GY +V
Sbjct: 93 DDDAWMHTG-------------------------------------DLATMDEQGYVNIV 115
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
GRIKDM+IRGGENIYP+EIEEF+ HP V + GVPD R GEE+ I +K L
Sbjct: 116 GRIKDMVIRGGENIYPREIEEFLYRHPQVQDVQVVGVPDARYGEELCAWIIVKPGQALT 174
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY +VGRIKDM+IRGGENIYP+EIEEF+ HP V + GVPD R GEE+
Sbjct: 102 DLATMDEQGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPQVQDVQVVGVPDARYGEEL 161
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I +K L D +R FCKG+++ +
Sbjct: 162 CAWIIVKPGQALTEDGVRDFCKGQIAHY 189
>gi|299535045|ref|ZP_07048371.1| acyl-CoA synthase [Lysinibacillus fusiformis ZC1]
gi|424737899|ref|ZP_18166346.1| acyl-CoA synthase [Lysinibacillus fusiformis ZB2]
gi|298729541|gb|EFI70090.1| acyl-CoA synthase [Lysinibacillus fusiformis ZC1]
gi|422948183|gb|EKU42568.1| acyl-CoA synthase [Lysinibacillus fusiformis ZB2]
Length = 544
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 70/118 (59%), Gaps = 3/118 (2%)
Query: 369 ARIYHYKK--YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIY 426
R YH K Y +EE D G + D + E GY +V GR+KDMIIRGGEN+Y
Sbjct: 393 TRGYHVMKGYYKNQEETDLAIDEDGW-LHTGDLATMDEAGYVRVTGRLKDMIIRGGENLY 451
Query: 427 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
P+EIEEF+ THP + + GVPD GEE I LKE + AD+IR +C+ K+S+
Sbjct: 452 PREIEEFLYTHPKISDVQVAGVPDPVYGEEAAAWIVLKEGEQATADEIRDYCRDKISR 509
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 76/168 (45%), Gaps = 37/168 (22%)
Query: 23 VVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAM 82
VV P GEL RG+ M GY++++++T I D WL TG
Sbjct: 375 VVPGTTEEAPTNEQGELCTRGYHVMKGYYKNQEETDLAIDEDGWLHTG------------ 422
Query: 83 AIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEE 142
D + E GY +V GR+KDMIIRGGEN+YP+EIEE
Sbjct: 423 -------------------------DLATMDEAGYVRVTGRLKDMIIRGGENLYPREIEE 457
Query: 143 FIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
F+ THP + + GVPD GEE I LKE + A E + D
Sbjct: 458 FLYTHPKISDVQVAGVPDPVYGEEAAAWIVLKEGEQATADEIRDYCRD 505
>gi|255954467|ref|XP_002567986.1| Pc21g09470 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589697|emb|CAP95844.1| Pc21g09470 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 574
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 76/160 (47%), Gaps = 41/160 (25%)
Query: 21 AKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPD----RWLRTGRYKKTS 76
AKVV IV G GEL G GYW +E+KT+E + D W+ TG
Sbjct: 384 AKVVGKGGEIVRRGERGELCTSGFALQKGYWGNEEKTREVMRVDGDGVLWMHTG------ 437
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
D+ + EDGY + GRIKD+IIRGGENI+
Sbjct: 438 -------------------------------DEAFIDEDGYAHITGRIKDLIIRGGENIF 466
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
P+EIEE + HP++ EA G+ DER GE VG +K+ E
Sbjct: 467 PREIEERLTLHPSISEASVVGIKDERYGEVVGCFLKMAEG 506
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 49/69 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ + EDGY + GRIKD+IIRGGENI+P+EIEE + HP++ EA G+ DER GE V
Sbjct: 438 DEAFIDEDGYAHITGRIKDLIIRGGENIFPREIEERLTLHPSISEASVVGIKDERYGEVV 497
Query: 458 GISIKLKEN 466
G +K+ E
Sbjct: 498 GCFLKMAEG 506
>gi|258405787|ref|YP_003198529.1| AMP-binding domain-containing protein [Desulfohalobium retbaense
DSM 5692]
gi|257798014|gb|ACV68951.1| AMP-dependent synthetase and ligase [Desulfohalobium retbaense DSM
5692]
Length = 549
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 68/109 (62%)
Query: 377 YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 436
Y EE AG + D V+ EDGY + GR+KDMIIRGGENIYP+EIEEF+ +
Sbjct: 404 YYNMEEATAETIDAGGWLHSGDLGVMDEDGYLSITGRLKDMIIRGGENIYPREIEEFLYS 463
Query: 437 HPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
V + GVP E+ GE++G I K + +L +D+R FC+GKV+++
Sbjct: 464 MDGVADVQVVGVPSEKYGEQIGAFIIPKSDFELAPEDVRDFCRGKVARY 512
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 78/162 (48%), Gaps = 38/162 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ +VVD N VP G GE+ RG+ M GY+ E+ T ETI WL +G
Sbjct: 372 IEVQVVDPETNTPVPAGAQGEVCCRGYNVMAGYYNMEEATAETIDAGGWLHSG------- 424
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D V+ EDGY + GR+KDMIIRGGENIYP
Sbjct: 425 ------------------------------DLGVMDEDGYLSITGRLKDMIIRGGENIYP 454
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKL 179
+EIEEF+ + V + GVP E+ GE++G I K + +L
Sbjct: 455 REIEEFLYSMDGVADVQVVGVPSEKYGEQIGAFIIPKSDFEL 496
>gi|212538689|ref|XP_002149500.1| long-chain-fatty-acid-CoA ligase, putative [Talaromyces marneffei
ATCC 18224]
gi|210069242|gb|EEA23333.1| long-chain-fatty-acid-CoA ligase, putative [Talaromyces marneffei
ATCC 18224]
Length = 598
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 80/170 (47%), Gaps = 43/170 (25%)
Query: 21 AKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR----WLRTGRYKKT 75
AK++D R VP G GEL + G+ GYW++ QKT ET+ D WLRTG
Sbjct: 404 AKIIDPKTGRTVPIGQRGELCMSGYQVHSGYWKNPQKTTETLLRDEDGKVWLRTG----- 458
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
D+ V DGY + GR KD+IIRGGENI
Sbjct: 459 --------------------------------DEAVFDADGYCTITGRFKDIIIRGGENI 486
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK-LNAYED 184
YP EIEE + HP + A GVPD GE VG I+ K + K L + ED
Sbjct: 487 YPLEIEERLGRHPAISRATVIGVPDSHYGEVVGTFIEFKPDVKQLPSAED 536
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ V DGY + GR KD+IIRGGENIYP EIEE + HP + A GVPD GE V
Sbjct: 459 DEAVFDADGYCTITGRFKDIIIRGGENIYPLEIEERLGRHPAISRATVIGVPDSHYGEVV 518
Query: 458 GISIKLKENAKL--NADDIR 475
G I+ K + K +A+D+R
Sbjct: 519 GTFIEFKPDVKQLPSAEDLR 538
>gi|89896537|ref|YP_520024.1| hypothetical protein DSY3791 [Desulfitobacterium hafniense Y51]
gi|89335985|dbj|BAE85580.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 562
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 82/168 (48%), Gaps = 38/168 (22%)
Query: 15 SSSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYK 73
S K++D + +P G GELL +G+ M GY+ + T E + D WL+TG
Sbjct: 382 CSPGSSIKIIDPETGKELPPGQVGELLAKGYHMMKGYYNMPEATNEVMTKDGWLKTG--- 438
Query: 74 KTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGE 133
D + EDGY Q+VGR KDMIIRGGE
Sbjct: 439 ----------------------------------DLASVDEDGYYQIVGRKKDMIIRGGE 464
Query: 134 NIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
NI P+EIE+ I T P V +A GVPDE+ GEE+ I L E AKL++
Sbjct: 465 NIAPREIEDVITTLPGVKDAQVIGVPDEKYGEEIMAYITLVEGAKLSS 512
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDGY Q+VGR KDMIIRGGENI P+EIE+ I T P V +A GVPDE+ GEE+
Sbjct: 439 DLASVDEDGYYQIVGRKKDMIIRGGENIAPREIEDVITTLPGVKDAQVIGVPDEKYGEEI 498
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I L E AKL+++D++ + + +S F
Sbjct: 499 MAYITLVEGAKLSSEDVQNYVRNNLSSF 526
>gi|444424341|ref|ZP_21219799.1| AMP-binding domain protein [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444242336|gb|ELU53850.1| AMP-binding domain protein [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 563
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 80/161 (49%), Gaps = 37/161 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ KV++ N I T GEL RG+C MLGYW DE+KT TI + WL +G
Sbjct: 385 EVKVINLNGNIAERNTIGELCTRGYCVMLGYWNDEEKTSNTIDSEGWLHSG--------- 435
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ ++GY +VGR KD+IIRGGENI+P++
Sbjct: 436 ----------------------------DLAVMDDEGYLSIVGRSKDLIIRGGENIFPRD 467
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IE+ + + + +GV D+ GE+V IKL + K++
Sbjct: 468 IEDVLHGLETIEDVAVFGVADDYYGEKVCAWIKLAQGHKVS 508
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 380 EEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
EE+ DS G + D V+ ++GY +VGR KD+IIRGGENI+P++IE+ +
Sbjct: 419 EEKTSNTIDSEGW-LHSGDLAVMDDEGYLSIVGRSKDLIIRGGENIFPRDIEDVLHGLET 477
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ + +GV D+ GE+V IKL + K++ DDI+ + +++ F
Sbjct: 478 IEDVAVFGVADDYYGEKVCAWIKLAQGHKVSEDDIKVYLSERIAHF 523
>gi|414153677|ref|ZP_11409999.1| short chain acyl-CoA synthetase, anaerobic [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411454698|emb|CCO07903.1| short chain acyl-CoA synthetase, anaerobic [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 554
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 92/189 (48%), Gaps = 40/189 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ +T+ + +AK+VD P G GE++ RG+ M GY++ + T + I
Sbjct: 354 DPIELRVTTVGRVIPNVEAKIVDPETGEDCPPGVQGEIVARGYNVMKGYYKMPEATAQAI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ WL TG D ++ E GY ++
Sbjct: 414 DREGWLHTG-------------------------------------DLGIMDEKGYFKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGENIYP+EIEEF+ THP + + GVP + GEEV I+L+E L
Sbjct: 437 GRLKDMIIRGGENIYPREIEEFLYTHPAIKDVQVIGVPSLKYGEEVLAYIQLREGYSLTK 496
Query: 182 YEDKSISSD 190
E ++ D
Sbjct: 497 EEVQAYCKD 505
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E GY ++ GR+KDMIIRGGENIYP+EIEEF+ THP + + GVP + GEEV
Sbjct: 423 DLGIMDEKGYFKITGRLKDMIIRGGENIYPREIEEFLYTHPAIKDVQVIGVPSLKYGEEV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+L+E L ++++ +CK K++K+
Sbjct: 483 LAYIQLREGYSLTKEEVQAYCKDKIAKY 510
>gi|159126474|gb|EDP51590.1| AMP-binding enzyme, putative [Aspergillus fumigatus A1163]
Length = 570
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 86/189 (45%), Gaps = 45/189 (23%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNR--IVPFGTPGELLIRGHCNMLGYWEDEQKTKET 60
+P D + ST+ +AKVVD +R I+P T GEL + G+ M YW D +T E
Sbjct: 346 DPLDKRISTVGRLMPHVEAKVVDPADRSKILPINTRGELAVSGYLLMKEYWGDPHRTAEV 405
Query: 61 IGPDR----WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDG 116
+ D+ W+ TG D+ + DG
Sbjct: 406 MIADQEGKIWMHTG-------------------------------------DEASMSPDG 428
Query: 117 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
Y + GRIKD+IIRGGENI+P EIE + T P V + GVPDER GE V I KE
Sbjct: 429 YITITGRIKDLIIRGGENIHPLEIENCLLTCPGVADVSVVGVPDERYGEVVAAFIICKEQ 488
Query: 177 AKLNAYEDK 185
+ EDK
Sbjct: 489 DRRTVAEDK 497
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ + DGY + GRIKD+IIRGGENI+P EIE + T P V + GVPDER GE V
Sbjct: 420 DEASMSPDGYITITGRIKDLIIRGGENIHPLEIENCLLTCPGVADVSVVGVPDERYGEVV 479
Query: 458 GISIKLKENAK--LNADDIRTFCKGKVS 483
I KE + + D IR + + ++S
Sbjct: 480 AAFIICKEQDRRTVAEDKIRDWVRERLS 507
>gi|70998120|ref|XP_753790.1| AMP-binding enzyme [Aspergillus fumigatus Af293]
gi|66851426|gb|EAL91752.1| AMP-binding enzyme, putative [Aspergillus fumigatus Af293]
Length = 570
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 86/189 (45%), Gaps = 45/189 (23%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNR--IVPFGTPGELLIRGHCNMLGYWEDEQKTKET 60
+P D + ST+ +AKVVD +R I+P T GEL + G+ M YW D +T E
Sbjct: 346 DPLDKRISTVGRLMPHVEAKVVDPADRSKILPINTRGELAVSGYLLMKEYWGDPHRTAEV 405
Query: 61 IGPDR----WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDG 116
+ D+ W+ TG D+ + DG
Sbjct: 406 MIADQEGKIWMHTG-------------------------------------DEASMSPDG 428
Query: 117 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
Y + GRIKD+IIRGGENI+P EIE + T P V + GVPDER GE V I KE
Sbjct: 429 YITITGRIKDLIIRGGENIHPLEIENCLLTCPGVADVSVVGVPDERYGEVVAAFIICKEQ 488
Query: 177 AKLNAYEDK 185
+ EDK
Sbjct: 489 DRRTVAEDK 497
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ + DGY + GRIKD+IIRGGENI+P EIE + T P V + GVPDER GE V
Sbjct: 420 DEASMSPDGYITITGRIKDLIIRGGENIHPLEIENCLLTCPGVADVSVVGVPDERYGEVV 479
Query: 458 GISIKLKENAK--LNADDIRTFCKGKVS 483
I KE + + D IR + + ++S
Sbjct: 480 AAFIICKEQDRRTVAEDKIRDWVRERLS 507
>gi|410662670|ref|YP_006915041.1| acyl-CoA synthetase [Simiduia agarivorans SA1 = DSM 21679]
gi|409025027|gb|AFU97311.1| acyl-CoA synthetase [Simiduia agarivorans SA1 = DSM 21679]
Length = 536
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 75/148 (50%), Gaps = 37/148 (25%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ KVVD +P G+PGEL +RG M GYW+ ++T + + D WL+TG
Sbjct: 370 EVKVVDEEGNALPEGSPGELCVRGPQVMKGYWQRPEETAKILDDDGWLKTG--------- 420
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V++ DGY ++V R KDMII G N+YP E
Sbjct: 421 ----------------------------DMAVIQPDGYVKIVDRKKDMIIVSGFNVYPNE 452
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEV 167
IE+ + HP V+EA A G+PDE+ GE+V
Sbjct: 453 IEDVVCQHPAVVEAAAIGLPDEKSGEQV 480
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 379 REEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHP 438
R EE + D G + D V++ DGY ++V R KDMII G N+YP EIE+ + HP
Sbjct: 403 RPEETAKILDDDGW-LKTGDMAVIQPDGYVKIVDRKKDMIIVSGFNVYPNEIEDVVCQHP 461
Query: 439 NVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
V+EA A G+PDE+ GE+V + + + + L D+ +FC+ ++ +
Sbjct: 462 AVVEAAAIGLPDEKSGEQVKLFV-VSSDPSLTEKDVISFCRENLTGY 507
>gi|357039422|ref|ZP_09101216.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355358321|gb|EHG06089.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 559
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 89/174 (51%), Gaps = 42/174 (24%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD--HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKET 60
+P L+ ST+ + + + K+VD ++P G GEL RG+ M GY++ + T +T
Sbjct: 359 DPIQLRVSTVGRALPNVEVKIVDPETGEELLP-GMQGELCTRGYHVMKGYYKMPEATAQT 417
Query: 61 IGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQV 120
+ + WL TG D V+ E+GY ++
Sbjct: 418 VDREAWLHTG-------------------------------------DLAVMDENGYCKI 440
Query: 121 VGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
GR+KDMIIRGGENIYP+EIEEF+ T+P + + GVP ER GEEV ++LK
Sbjct: 441 TGRLKDMIIRGGENIYPREIEEFLYTNPKIKDVQVVGVPSERYGEEVVAFVQLK 494
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 60/87 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+GY ++ GR+KDMIIRGGENIYP+EIEEF+ T+P + + GVP ER GEEV
Sbjct: 428 DLAVMDENGYCKITGRLKDMIIRGGENIYPREIEEFLYTNPKIKDVQVVGVPSERYGEEV 487
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
++LK +I+ FC GK+++
Sbjct: 488 VAFVQLKPGEIAEEAEIKEFCNGKIAR 514
>gi|322700504|gb|EFY92259.1| long-chain-fatty-acid-CoA ligase, putative [Metarhizium acridum
CQMa 102]
Length = 570
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 78/162 (48%), Gaps = 41/162 (25%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR----WLRTGRYKKT 75
QAK+VD + IVP GT GEL + G+ GYW + +KT E + D WL TG
Sbjct: 379 QAKIVDRDGSIVPVGTRGELCMAGYQLQAGYWNNSEKTNEVMVRDAAGLLWLHTG----- 433
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
D+ V E+GY + GR KD+IIRGGENI
Sbjct: 434 --------------------------------DEAVFDENGYCTITGRFKDIIIRGGENI 461
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
YP EIEE + HP+V A G+ DE GE VG ++ E++
Sbjct: 462 YPLEIEERLMAHPSVSRAIVVGLKDEHYGEVVGAFVERLESS 503
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 384 ITVPDSAGRS-IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 442
+ V D+AG + D+ V E+GY + GR KD+IIRGGENIYP EIEE + HP+V
Sbjct: 419 VMVRDAAGLLWLHTGDEAVFDENGYCTITGRFKDIIIRGGENIYPLEIEERLMAHPSVSR 478
Query: 443 AYAYGVPDERMGEEVGISIKLKENAKLNAD-DIRTFCKGKVSK 484
A G+ DE GE VG ++ E++ D ++R + + + K
Sbjct: 479 AIVVGLKDEHYGEVVGAFVERLESSPRPTDLELRDWVRNTLGK 521
>gi|308501092|ref|XP_003112731.1| CRE-ACS-1 protein [Caenorhabditis remanei]
gi|308267299|gb|EFP11252.1| CRE-ACS-1 protein [Caenorhabditis remanei]
Length = 645
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 53/182 (29%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A ++D N IVP G GE+++RG+ M YW E++TK+ I DRW TG
Sbjct: 441 LEAAIIDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQDRWYHTG-------- 492
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ ++G +VGR KDMI+RGGENIYP
Sbjct: 493 -----------------------------DIAVMHDNGTISIVGRSKDMIVRGGENIYPT 523
Query: 139 EIEEFIQTHPNVLEAYA----------------YGVPDERMGEEVGISIKLKENAKLNAY 182
E+E+F+ H +V + + GVPDER GE V ++L E+A+
Sbjct: 524 EVEQFLFKHQSVEDVHVSLMDIMFVINEFMFQIVGVPDERFGEVVCAWVRLHESAEGKTT 583
Query: 183 ED 184
E+
Sbjct: 584 EE 585
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 294 PVTLRRNLIDPLEIVQNRIDDVEYEFQEKMFKDVKNYLITPALKGLYHFKKWMNPKFSTT 353
P+TL R L+ + + ++ E F ++ +K + H M+ +
Sbjct: 389 PITLCRRLVQDMHMTDMQVCYGTTETSPVSFMSTRDDPPEQRIKSVGHI---MDHLEAAI 445
Query: 354 TRKVALTWPNSMDSEARIYHY---KKYLREEENITVPDSAGRSIFEKDQFVLREDGYGQV 410
K P + E + Y + Y EE + R D V+ ++G +
Sbjct: 446 IDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQDRWYHTGDIAVMHDNGTISI 505
Query: 411 VGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYA----------------YGVPDERMG 454
VGR KDMI+RGGENIYP E+E+F+ H +V + + GVPDER G
Sbjct: 506 VGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHVSLMDIMFVINEFMFQIVGVPDERFG 565
Query: 455 EEVGISIKLKENA--KLNADDIRTFCKGKVSKF 485
E V ++L E+A K +DI+ +CKGK++ F
Sbjct: 566 EVVCAWVRLHESAEGKTTEEDIKAWCKGKIAHF 598
>gi|299739945|ref|XP_001840371.2| acyl-CoA synthetase [Coprinopsis cinerea okayama7#130]
gi|298404014|gb|EAU81427.2| acyl-CoA synthetase [Coprinopsis cinerea okayama7#130]
Length = 611
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 41/154 (26%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR----WLRTGRYKK 74
+A++V + VP G PGELL+ G+ GYW D ++T++ + D+ W+ TG
Sbjct: 420 VKARIVSPDGETVPIGVPGELLVSGYLLQKGYWGDAEQTEKVMKKDKDGVLWMHTG---- 475
Query: 75 TSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGEN 134
D+ V+ E+GY ++VGRIKD+IIRGGEN
Sbjct: 476 ---------------------------------DEAVMDEEGYVRIVGRIKDIIIRGGEN 502
Query: 135 IYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVG 168
++P +IE + HP++ EA A VPD + GE VG
Sbjct: 503 LFPVQIENTLTAHPSIKEAAAVSVPDSKYGEVVG 536
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 46/61 (75%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ V+ E+GY ++VGRIKD+IIRGGEN++P +IE + HP++ EA A VPD + GE V
Sbjct: 476 DEAVMDEEGYVRIVGRIKDIIIRGGENLFPVQIENTLTAHPSIKEAAAVSVPDSKYGEVV 535
Query: 458 G 458
G
Sbjct: 536 G 536
>gi|296141636|ref|YP_003648879.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
gi|296029770|gb|ADG80540.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
Length = 500
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 75/166 (45%), Gaps = 37/166 (22%)
Query: 18 SFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
Q + VD + VP G GE+ +RGH M GYW + T + I D W TG
Sbjct: 327 GVQMRCVDDSGNEVPQGERGEVQVRGHNIMKGYWNLPEATADAIDADGWFSTG------- 379
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D ++ DGY +V R K+MIIRGG N+YP
Sbjct: 380 ------------------------------DIGIVDADGYFSIVDRKKEMIIRGGLNVYP 409
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
+EIEE + HP V EA G+P + +GEEVG +I LK L E
Sbjct: 410 REIEEVLYGHPAVAEAAVVGIPHDTLGEEVGAAIALKAGVALTVDE 455
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ DGY +V R K+MIIRGG N+YP+EIEE + HP V EA G+P + +GEEV
Sbjct: 380 DIGIVDADGYFSIVDRKKEMIIRGGLNVYPREIEEVLYGHPAVAEAAVVGIPHDTLGEEV 439
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
G +I LK L D+IR + K +V+ +
Sbjct: 440 GAAIALKAGVALTVDEIRDYVKERVASY 467
>gi|167628230|ref|YP_001678729.1| long chain fatty acid acyl-coa ligase [Heliobacterium modesticaldum
Ice1]
gi|167590970|gb|ABZ82718.1| long chain fatty acid acyl-coa ligase [Heliobacterium modesticaldum
Ice1]
Length = 558
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY ++ GR KDMIIRGGENIYP+E+EEF+ THP V + GVPD + GEE
Sbjct: 427 DLATMDEEGYCRITGRAKDMIIRGGENIYPREVEEFLFTHPKVKDVQVVGVPDPKYGEEA 486
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I LK+ + ++IR FC+GK+S++
Sbjct: 487 LACIILKDGEEATEEEIRYFCRGKISRY 514
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 70/146 (47%), Gaps = 37/146 (25%)
Query: 31 VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKP 90
+P GT GEL RG M GY+ + + T+ I + WL TG
Sbjct: 387 IPRGTQGELCARGFGTMKGYYNNPEATEAAIDAEGWLHTG-------------------- 426
Query: 91 LQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 150
D + E+GY ++ GR KDMIIRGGENIYP+E+EEF+ THP V
Sbjct: 427 -----------------DLATMDEEGYCRITGRAKDMIIRGGENIYPREVEEFLFTHPKV 469
Query: 151 LEAYAYGVPDERMGEEVGISIKLKEN 176
+ GVPD + GEE I LK+
Sbjct: 470 KDVQVVGVPDPKYGEEALACIILKDG 495
>gi|336260717|ref|XP_003345152.1| hypothetical protein SMAC_07441 [Sordaria macrospora k-hell]
gi|380096500|emb|CCC06548.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 580
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 87/186 (46%), Gaps = 43/186 (23%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIG 62
+P D++ +T+ + AK+VD + +IVP GT GEL I G+ GYW + +KT E +
Sbjct: 372 DPIDVRLTTVGTLMPHAHAKIVDRDGQIVPIGTKGELCIGGYQLQAGYWNNSEKTNEVMM 431
Query: 63 PDR----WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYG 118
D WL TG D+ V + GY
Sbjct: 432 RDESGMLWLYTG-------------------------------------DEAVFNDQGYC 454
Query: 119 QVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
+ GR KD+IIRGGENIYP EIEE + HP V A G+ D+ GE VG + L+ +
Sbjct: 455 SITGRFKDIIIRGGENIYPLEIEERLVAHPAVSMAVVVGLKDQHYGEVVGAFLGLETGHQ 514
Query: 179 LNAYED 184
A E+
Sbjct: 515 PMATEE 520
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
++ D+ V + GY + GR KD+IIRGGENIYP EIEE + HP V A G+ D+
Sbjct: 440 LYTGDEAVFNDQGYCSITGRFKDIIIRGGENIYPLEIEERLVAHPAVSMAVVVGLKDQHY 499
Query: 454 GEEVGISIKLKENAK-LNADDIRTFCKGKVSK 484
GE VG + L+ + + +++R +C+ K+ K
Sbjct: 500 GEVVGAFLGLETGHQPMATEEVREWCRRKLGK 531
>gi|403528225|ref|YP_006663112.1| acyl-CoA synthetase [Arthrobacter sp. Rue61a]
gi|403230652|gb|AFR30074.1| putative acyl-CoA synthetase [Arthrobacter sp. Rue61a]
Length = 558
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 78/160 (48%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+++V+D + +V G GEL RG+ M GYW KT E I + W+ TG +
Sbjct: 382 LESRVIDPGSMEVVERGVIGELCTRGYSVMQGYWGQPDKTAEAIDAEGWMHTGDLAR--- 438
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
+ EDGY + GRIKDM+IRGGENIYP
Sbjct: 439 ----------------------------------MDEDGYLVIEGRIKDMVIRGGENIYP 464
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ HP++ + GVPDE+ GEE+ I LK +
Sbjct: 465 REIEEFLYLHPSIQDVQVIGVPDEKYGEELMACIILKPGS 504
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ EDGY + GRIKDM+IRGGENIYP+EIEEF+ HP++ + GVPDE+ GEE+ I
Sbjct: 439 MDEDGYLVIEGRIKDMVIRGGENIYPREIEEFLYLHPSIQDVQVIGVPDEKYGEELMACI 498
Query: 462 KLKENA-KLNADDIRTFCKGKVSKF 485
LK + L A+++ +C+GK++ +
Sbjct: 499 ILKPGSPALTAEELAEYCRGKLAHY 523
>gi|395649590|ref|ZP_10437440.1| AMP-binding domain protein [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 544
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 78/168 (46%), Gaps = 37/168 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K++D + V G GEL RG+ MLGYW + + T++ + W+ TG
Sbjct: 368 LENKLIDIDGNTVARGEVGELCTRGYSVMLGYWNNPEGTRDAVDEAGWMHTG-------- 419
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E GY +VGR KDMIIRGGEN+YP+
Sbjct: 420 -----------------------------DLATMDEHGYVCIVGRNKDMIIRGGENLYPR 450
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
E+EEF THP V + G+PD R GEE+ IKL A E +S
Sbjct: 451 ELEEFFFTHPAVADVQIIGIPDPRYGEEIVAWIKLHPGHGATALELQS 498
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY +VGR KDMIIRGGEN+YP+E+EEF THP V + G+PD R GEE+
Sbjct: 420 DLATMDEHGYVCIVGRNKDMIIRGGENLYPRELEEFFFTHPAVADVQIIGIPDPRYGEEI 479
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKL A +++++CKG+++ F
Sbjct: 480 VAWIKLHPGHGATALELQSWCKGRIAHF 507
>gi|395794343|ref|ZP_10473670.1| AMP-binding domain protein [Pseudomonas sp. Ag1]
gi|395341540|gb|EJF73354.1| AMP-binding domain protein [Pseudomonas sp. Ag1]
Length = 543
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 73/165 (44%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++K++D V G GEL RG+ MLGYW + T+E I W+ TG
Sbjct: 368 LESKIIDDAGNTVARGQVGELCTRGYSVMLGYWNNPDSTREAIDEAGWMHTG-------- 419
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E GY + GR KDMIIRGGEN+YP+
Sbjct: 420 -----------------------------DLATMDEHGYVCIAGRNKDMIIRGGENVYPR 450
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
E+EEF THP V + G+PDER GE + IK N E
Sbjct: 451 ELEEFFFTHPAVADVQVIGIPDERYGEAIVAWIKFHPGHVANELE 495
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 387 PDSAGRSIFEK------DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
PDS +I E D + E GY + GR KDMIIRGGEN+YP+E+EEF THP V
Sbjct: 403 PDSTREAIDEAGWMHTGDLATMDEHGYVCIAGRNKDMIIRGGENVYPRELEEFFFTHPAV 462
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ G+PDER GE + IK N +++T+CKG+++ F
Sbjct: 463 ADVQVIGIPDERYGEAIVAWIKFHPGHVANELELQTWCKGRIAHF 507
>gi|326404834|ref|YP_004284916.1| putative fatty-acid--CoA ligase [Acidiphilium multivorum AIU301]
gi|325051696|dbj|BAJ82034.1| putative fatty-acid--CoA ligase [Acidiphilium multivorum AIU301]
Length = 550
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 70/147 (47%), Gaps = 37/147 (25%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K +D RIV G GEL RG+ MLGYW + KT E I W+ TG
Sbjct: 376 LEVKAIDAEGRIVKRGERGELCTRGYSVMLGYWGNAAKTAEAIDAAGWMHTG-------- 427
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ E+GY +VGR KD++IRGGENIYP+
Sbjct: 428 -----------------------------DLGVIDEEGYCTIVGRSKDVVIRGGENIYPR 458
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGE 165
E+EEF+ THP + +G+ D + GE
Sbjct: 459 EVEEFLFTHPRIASVAVFGIADAKWGE 485
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 388 DSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYG 447
D+AG + D V+ E+GY +VGR KD++IRGGENIYP+E+EEF+ THP + +G
Sbjct: 419 DAAGW-MHTGDLGVIDEEGYCTIVGRSKDVVIRGGENIYPREVEEFLFTHPRIASVAVFG 477
Query: 448 VPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ D + GE +K L ++ FC+G+++ +
Sbjct: 478 IADAKWGEVPCAWVKPNPGETLTPAEVIGFCEGRIAHY 515
>gi|15678684|ref|NP_275799.1| AMP-binding protein [Methanothermobacter thermautotrophicus str.
Delta H]
gi|2621739|gb|AAB85162.1| long-chain-fatty-acid-CoA ligase [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 548
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 73/146 (50%), Gaps = 37/146 (25%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G PGE+ RG+ M GY++ + T E I D WL +G
Sbjct: 385 GEPGEICCRGYNVMKGYYKMPEMTAEAIDEDGWLHSG----------------------- 421
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY +VGRIKDMIIRGGENIYP+EIEEF+ T P V +
Sbjct: 422 --------------DLAVMDEDGYYSIVGRIKDMIIRGGENIYPREIEEFLHTMPGVKDV 467
Query: 154 YAYGVPDERMGEEVGISIKLKENAKL 179
G+PDE+ GE VG I ++ A +
Sbjct: 468 QVVGIPDEKYGEIVGAFIIREDGADI 493
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDGY +VGRIKDMIIRGGENIYP+EIEEF+ T P V + G+PDE+ GE V
Sbjct: 422 DLAVMDEDGYYSIVGRIKDMIIRGGENIYPREIEEFLHTMPGVKDVQVVGIPDEKYGEIV 481
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
G I ++ A + +D+R + +++++
Sbjct: 482 GAFIIREDGADILEEDVRDYAIQRIARY 509
>gi|398974125|ref|ZP_10684862.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM25]
gi|398142009|gb|EJM30914.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM25]
Length = 565
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 78/168 (46%), Gaps = 39/168 (23%)
Query: 8 DLQFSTLSSSS--FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR 65
+L+ +T+ + ++K++D VP GT GEL RG+ MLGYW + T E I
Sbjct: 375 ELRVTTVGRTQPQLESKIIDEAGNPVPRGTIGELCTRGYSVMLGYWNNPNATAEAIDAAG 434
Query: 66 WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIK 125
W+ TG D + ++GY + GR K
Sbjct: 435 WMHTG-------------------------------------DLASMNDEGYVCIAGRNK 457
Query: 126 DMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
DMIIRGGENIYP+E+EEF HP V + G+P R GEE+ IK
Sbjct: 458 DMIIRGGENIYPRELEEFFFAHPAVADVQVIGIPCSRYGEEIVAWIKF 505
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 388 DSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYG 447
D+AG + D + ++GY + GR KDMIIRGGENIYP+E+EEF HP V + G
Sbjct: 431 DAAGW-MHTGDLASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFAHPAVADVQVIG 489
Query: 448 VPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+P R GEE+ IK +++ +CK +++ F
Sbjct: 490 IPCSRYGEEIVAWIKFHPGHSATEQELQAWCKERIAHF 527
>gi|336476845|ref|YP_004615986.1| AMP-dependent synthetase and ligase [Methanosalsum zhilinae DSM
4017]
gi|335930226|gb|AEH60767.1| AMP-dependent synthetase and ligase [Methanosalsum zhilinae DSM
4017]
Length = 544
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 37/145 (25%)
Query: 36 PGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQ 95
PGE+ RG+ M GY++ + T++TI D WL +G
Sbjct: 387 PGEICCRGYNVMKGYYKMPEMTQKTIDEDGWLHSG------------------------- 421
Query: 96 QQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYA 155
D ++ +DGY + GRIKDMIIRGGENIYPKEIEEF+ T P + +A
Sbjct: 422 ------------DLAIMDKDGYYSITGRIKDMIIRGGENIYPKEIEEFLYTVPGIKDAQV 469
Query: 156 YGVPDERMGEEVGISIKLKENAKLN 180
G+PD++ GE VG + L++N+ L
Sbjct: 470 IGIPDDKYGEIVGAFVILQDNSDLT 494
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ +DGY + GRIKDMIIRGGENIYPKEIEEF+ T P + +A G+PD++ GE V
Sbjct: 422 DLAIMDKDGYYSITGRIKDMIIRGGENIYPKEIEEFLYTVPGIKDAQVIGIPDDKYGEIV 481
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
G + L++N+ L DIR + K++++
Sbjct: 482 GAFVILQDNSDLTEADIRDYAISKIARY 509
>gi|421140323|ref|ZP_15600339.1| acyl-CoA synthetase [Pseudomonas fluorescens BBc6R8]
gi|404508530|gb|EKA22484.1| acyl-CoA synthetase [Pseudomonas fluorescens BBc6R8]
Length = 543
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 73/165 (44%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++K++D V G GEL RG+ MLGYW + T+E I W+ TG
Sbjct: 368 LESKIIDDAGNTVARGQVGELCTRGYSVMLGYWNNPDSTREAIDEAGWMHTG-------- 419
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E GY + GR KDMIIRGGEN+YP+
Sbjct: 420 -----------------------------DLATMDEHGYVCIAGRNKDMIIRGGENVYPR 450
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
E+EEF THP V + G+PDER GE + IK N E
Sbjct: 451 ELEEFFFTHPAVADVQVIGIPDERYGEAIVAWIKFHPGHVANELE 495
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 387 PDSAGRSIFEK------DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNV 440
PDS +I E D + E GY + GR KDMIIRGGEN+YP+E+EEF THP V
Sbjct: 403 PDSTREAIDEAGWMHTGDLATMDEHGYVCIAGRNKDMIIRGGENVYPRELEEFFFTHPAV 462
Query: 441 LEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ G+PDER GE + IK N +++T+CKG+++ F
Sbjct: 463 ADVQVIGIPDERYGEAIVAWIKFHPGHVANELELQTWCKGRIAHF 507
>gi|336326225|ref|YP_004606191.1| acyl-CoA synthetase [Corynebacterium resistens DSM 45100]
gi|336102207|gb|AEI10027.1| acyl-CoA synthetase [Corynebacterium resistens DSM 45100]
Length = 549
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 40/177 (22%)
Query: 5 NPTDLQFSTLSSSS--FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P D + T+ + K+++ + I+P G GE+ +RG+ M GYW+ KT E I
Sbjct: 354 DPLDKRVETVGRPGPHIEVKIINPDTGEILPRGEQGEICVRGYSVMKGYWDMPVKTAEAI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ W+ TG D ++ + Y Q+
Sbjct: 414 DKEGWMHTG-------------------------------------DLGLMDDGDYVQIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
GRIKDM+IRGGEN+YP+EIEEF+ +HP++ +A GVPDE+ GEE+ I + AK
Sbjct: 437 GRIKDMVIRGGENLYPREIEEFLYSHPDISDAQIIGVPDEKYGEELMAWIIMNPGAK 493
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Query: 402 LREDG-YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGIS 460
L +DG Y Q+ GRIKDM+IRGGEN+YP+EIEEF+ +HP++ +A GVPDE+ GEE+
Sbjct: 426 LMDDGDYVQITGRIKDMVIRGGENLYPREIEEFLYSHPDISDAQIIGVPDEKYGEELMAW 485
Query: 461 IKLKENAK-LNADDIRTFCKGKVSK 484
I + AK L + +R FC+G +++
Sbjct: 486 IIMNPGAKPLTVEALREFCEGHLAR 510
>gi|119964094|ref|YP_948746.1| long chain fatty acid-CoA ligase [Arthrobacter aurescens TC1]
gi|119950953|gb|ABM09864.1| putative long chain fatty acid-CoA ligase [Arthrobacter aurescens
TC1]
Length = 558
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 78/160 (48%), Gaps = 38/160 (23%)
Query: 19 FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+++++D + +V G GEL RG+ M GYW KT E I + W+ TG +
Sbjct: 382 LESRIIDPGSMEVVERGVIGELCTRGYSVMQGYWGQPDKTAEAIDAEGWMHTGDLAR--- 438
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
+ EDGY + GRIKDM+IRGGENIYP
Sbjct: 439 ----------------------------------MDEDGYLVIEGRIKDMVIRGGENIYP 464
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
+EIEEF+ HP++ + GVPDE+ GEE+ I LK +
Sbjct: 465 REIEEFLYLHPSIQDVQVIGVPDEKYGEELMACIILKPGS 504
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ EDGY + GRIKDM+IRGGENIYP+EIEEF+ HP++ + GVPDE+ GEE+ I
Sbjct: 439 MDEDGYLVIEGRIKDMVIRGGENIYPREIEEFLYLHPSIQDVQVIGVPDEKYGEELMACI 498
Query: 462 KLKENA-KLNADDIRTFCKGKVSKF 485
LK + L A+++ +C+GK++ +
Sbjct: 499 ILKPGSPALTAEELAEYCRGKLAHY 523
>gi|225175706|ref|ZP_03729699.1| AMP-dependent synthetase and ligase [Dethiobacter alkaliphilus AHT
1]
gi|225168630|gb|EEG77431.1| AMP-dependent synthetase and ligase [Dethiobacter alkaliphilus AHT
1]
Length = 554
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 62/87 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY ++ GR+KDMIIRGGENIYP+EIEEF+ T+P VL+ GVP E+ GEEV
Sbjct: 423 DLGTMDEHGYVKITGRLKDMIIRGGENIYPREIEEFLYTNPKVLDVQVIGVPSEKYGEEV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
IKL+E + ++IR F KGK+++
Sbjct: 483 MAVIKLREGETSSTEEIREFSKGKIAR 509
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 77/155 (49%), Gaps = 37/155 (23%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GE+ +RG+ M GY++ + T++ + D WL +G
Sbjct: 386 GVQGEICMRGYVVMKGYYKMPEATEKAVDKDGWLHSG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D + E GY ++ GR+KDMIIRGGENIYP+EIEEF+ T+P VL+
Sbjct: 423 --------------DLGTMDEHGYVKITGRLKDMIIRGGENIYPREIEEFLYTNPKVLDV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
GVP E+ GEEV IKL+E + E + S
Sbjct: 469 QVIGVPSEKYGEEVMAVIKLREGETSSTEEIREFS 503
>gi|295395646|ref|ZP_06805838.1| possible long-chain-fatty-acid--CoA ligase [Brevibacterium
mcbrellneri ATCC 49030]
gi|294971462|gb|EFG47345.1| possible long-chain-fatty-acid--CoA ligase [Brevibacterium
mcbrellneri ATCC 49030]
Length = 575
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 77/167 (46%), Gaps = 38/167 (22%)
Query: 19 FQAKVVDHNNRI-VPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ KV D + +P G GEL RG+ M GYW + KT E I W+ TG
Sbjct: 398 VEVKVADPVTGLPLPRGQKGELCTRGYSVMRGYWNEPDKTAEAIDDAGWMHTG------- 450
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D ++ EDGY + GRIKDM+IRGGENIYP
Sbjct: 451 ------------------------------DLAIMDEDGYLDISGRIKDMVIRGGENIYP 480
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
+EIEEF+ THP + + GVPD GEE+ + L++ ED
Sbjct: 481 REIEEFLYTHPAIRDVQVVGVPDSTYGEELLAWVILRDPTDTLTAED 527
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ EDGY + GRIKDM+IRGGENIYP+EIEEF+ THP + + GVPD GEE+
Sbjct: 451 DLAIMDEDGYLDISGRIKDMVIRGGENIYPREIEEFLYTHPAIRDVQVVGVPDSTYGEEL 510
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
+ L++ L A+D++ F +GK++ +
Sbjct: 511 LAWVILRDPTDTLTAEDVKAFAQGKLAHY 539
>gi|160901406|ref|YP_001566988.1| AMP-binding domain-containing protein [Delftia acidovorans SPH-1]
gi|160366990|gb|ABX38603.1| AMP-dependent synthetase and ligase [Delftia acidovorans SPH-1]
Length = 572
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 77/163 (47%), Gaps = 38/163 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD +V G GEL RG+ M GYW DE +T+E I D W+ TG
Sbjct: 391 LEVKIVDPATGEVVAPGVSGELCTRGYSVMHGYWGDEARTREAIDDDAWMHTG------- 443
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + E GY +VGRIKDM+IRGGENIYP
Sbjct: 444 ------------------------------DLATMDEQGYVNIVGRIKDMVIRGGENIYP 473
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
+EIEEF+ HP V + GVPD R GEE+ I +K L
Sbjct: 474 REIEEFLYRHPQVQDVQVVGVPDVRYGEELCAWIIVKPGQTLT 516
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY +VGRIKDM+IRGGENIYP+EIEEF+ HP V + GVPD R GEE+
Sbjct: 444 DLATMDEQGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPQVQDVQVVGVPDVRYGEEL 503
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I +K L D +R FCKG+++ +
Sbjct: 504 CAWIIVKPGQTLTEDGVRDFCKGQIAHY 531
>gi|326335689|ref|ZP_08201875.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325692118|gb|EGD34071.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 542
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 82/173 (47%), Gaps = 38/173 (21%)
Query: 19 FQAKVVDHNNR-IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K++D + I+ G GEL RG+ ML YW TK+ + RW+ TG
Sbjct: 363 LEIKIIDPQTKAILKRGESGELCTRGYSVMLKYWNSPDATKQVLDEQRWMHTG------- 415
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D ++ E+GY + GRIKD+IIRGGENI P
Sbjct: 416 ------------------------------DLAMMDEEGYLHISGRIKDLIIRGGENISP 445
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
KEIE+F+ T+ V++A GVP E+ GEE+ IK KE + E ++ D
Sbjct: 446 KEIEDFLYTYKGVMDAQVIGVPSEKYGEEIMAWIKPKEGVTITEEEIRAFCKD 498
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E+GY + GRIKD+IIRGGENI PKEIE+F+ T+ V++A GVP E+ GEE+
Sbjct: 416 DLAMMDEEGYLHISGRIKDLIIRGGENISPKEIEDFLYTYKGVMDAQVIGVPSEKYGEEI 475
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK KE + ++IR FCK +++ +
Sbjct: 476 MAWIKPKEGVTITEEEIRAFCKDRIAHY 503
>gi|336364160|gb|EGN92523.1| hypothetical protein SERLA73DRAFT_79558 [Serpula lacrymans var.
lacrymans S7.3]
Length = 646
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 80/165 (48%), Gaps = 31/165 (18%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AKVVD IVP G PGE+ + G+ GYW+D ++T + D
Sbjct: 450 VKAKVVDGEGNIVPIGKPGEIYVSGYLVQKGYWKDPEQTNRVMHGD-------------- 495
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
+ G + D+ ++ E+G+ ++VGR KD+IIRGGEN++P
Sbjct: 496 -----------------TKDKGTIWMSTGDEGIMDEEGFLRIVGRTKDIIIRGGENLFPV 538
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
+IE + HPNV EA A VPD + GE VG I + + L E
Sbjct: 539 QIENVLTAHPNVSEAAAVSVPDAKYGEVVGAWIVTRPDITLEKEE 583
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 54/80 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ ++ E+G+ ++VGR KD+IIRGGEN++P +IE + HPNV EA A VPD + GE V
Sbjct: 508 DEGIMDEEGFLRIVGRTKDIIIRGGENLFPVQIENVLTAHPNVSEAAAVSVPDAKYGEVV 567
Query: 458 GISIKLKENAKLNADDIRTF 477
G I + + L +++R F
Sbjct: 568 GAWIVTRPDITLEKEEVRRF 587
>gi|334339638|ref|YP_004544618.1| AMP-dependent synthetase and ligase [Desulfotomaculum ruminis DSM
2154]
gi|334090992|gb|AEG59332.1| AMP-dependent synthetase and ligase [Desulfotomaculum ruminis DSM
2154]
Length = 554
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 90/189 (47%), Gaps = 40/189 (21%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ +T+ + +AK+VD P G GE+ RG+ M GY++ + T + I
Sbjct: 354 DPIELRVATVGKVIPNVEAKIVDPETGEDCPPGIQGEICSRGYNVMKGYYKMPEATAQAI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D ++ E GY ++
Sbjct: 414 DQDGWLHTG-------------------------------------DLGIMDEKGYFKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDMIIRGGEN+YP+EIEEF+ THP + + GVP + GEEV ++L+E L
Sbjct: 437 GRLKDMIIRGGENVYPREIEEFLYTHPLIKDVQVVGVPSMKYGEEVLAYVQLREGVTLTK 496
Query: 182 YEDKSISSD 190
E + D
Sbjct: 497 EEIQDYCRD 505
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E GY ++ GR+KDMIIRGGEN+YP+EIEEF+ THP + + GVP + GEEV
Sbjct: 423 DLGIMDEKGYFKITGRLKDMIIRGGENVYPREIEEFLYTHPLIKDVQVVGVPSMKYGEEV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++L+E L ++I+ +C+ K++K+
Sbjct: 483 LAYVQLREGVTLTKEEIQDYCRDKIAKY 510
>gi|213962564|ref|ZP_03390826.1| acyl-CoA synthetase family member 2 [Capnocytophaga sputigena
Capno]
gi|213954890|gb|EEB66210.1| acyl-CoA synthetase family member 2 [Capnocytophaga sputigena
Capno]
Length = 544
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 80/166 (48%), Gaps = 38/166 (22%)
Query: 19 FQAKVVDHNNR-IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+++ + IV G GEL RG+ ML YW Q T++ I RW+ +G
Sbjct: 363 LEIKIINPETKAIVKRGESGELCTRGYSVMLKYWNSPQATQQVIDEQRWMHSG------- 415
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D ++ EDGY + GRIKD+IIRGGENI P
Sbjct: 416 ------------------------------DLAMMDEDGYIHISGRIKDLIIRGGENISP 445
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
KEIE+F+ T+ V++A GVP ++ GEEV IK KE L E
Sbjct: 446 KEIEDFLYTYEGVMDAQVIGVPSKKYGEEVMAWIKTKEGVTLTEQE 491
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 62/94 (65%)
Query: 392 RSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDE 451
R + D ++ EDGY + GRIKD+IIRGGENI PKEIE+F+ T+ V++A GVP +
Sbjct: 410 RWMHSGDLAMMDEDGYIHISGRIKDLIIRGGENISPKEIEDFLYTYEGVMDAQVIGVPSK 469
Query: 452 RMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
+ GEEV IK KE L ++ FCKG+++ +
Sbjct: 470 KYGEEVMAWIKTKEGVTLTEQELHDFCKGRIAHY 503
>gi|302673945|ref|XP_003026658.1| hypothetical protein SCHCODRAFT_40702 [Schizophyllum commune H4-8]
gi|300100342|gb|EFI91755.1| hypothetical protein SCHCODRAFT_40702, partial [Schizophyllum
commune H4-8]
Length = 532
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 41/176 (23%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPD----RWLRTGRYKK 74
+AK+VD + +VP G+ G+LL+ G+ GYW D+ +T+ + D W+ TG
Sbjct: 347 VKAKIVDGDGNVVPVGSAGQLLVAGYLLQKGYWNDDAQTQAVMKEDDNGTLWMHTG---- 402
Query: 75 TSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGEN 134
D+ ++ EDGY ++VGRIKD+IIRGGEN
Sbjct: 403 ---------------------------------DEGIMDEDGYLRIVGRIKDIIIRGGEN 429
Query: 135 IYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
++P +IE + HP + EA A VPD + GE VG I + ++ E + +D
Sbjct: 430 LFPVQIENALTDHPGIREAAAIAVPDMKYGEVVGTWIAREPGTDVSRAEVRRAVAD 485
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ ++ EDGY ++VGRIKD+IIRGGEN++P +IE + HP + EA A VPD + GE V
Sbjct: 403 DEGIMDEDGYLRIVGRIKDIIIRGGENLFPVQIENALTDHPGIREAAAIAVPDMKYGEVV 462
Query: 458 GISIKLKENAKLNADDIR 475
G I + ++ ++R
Sbjct: 463 GTWIAREPGTDVSRAEVR 480
>gi|310798026|gb|EFQ32919.1| AMP-binding enzyme [Glomerella graminicola M1.001]
Length = 576
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 77/162 (47%), Gaps = 41/162 (25%)
Query: 21 AKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR----WLRTGRYKKTS 76
AK+VD + IVP G GEL + G+ GYW + +KT E + D WL TG
Sbjct: 385 AKIVDRDGNIVPMGERGELCMAGYQLQAGYWNNSEKTNEVMVRDAAGVLWLHTG------ 438
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
D+ V DGY + GR KD+IIRGGENIY
Sbjct: 439 -------------------------------DEAVFDNDGYCSITGRFKDIIIRGGENIY 467
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
P EIEE + HP++ +A G+ DE GE VG ++ EN++
Sbjct: 468 PLEIEERLMAHPSISQAIVVGLKDEHYGEVVGAFVQRAENSE 509
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 384 ITVPDSAGRS-IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 442
+ V D+AG + D+ V DGY + GR KD+IIRGGENIYP EIEE + HP++ +
Sbjct: 424 VMVRDAAGVLWLHTGDEAVFDNDGYCSITGRFKDIIIRGGENIYPLEIEERLMAHPSISQ 483
Query: 443 AYAYGVPDERMGEEVGISIKLKENAK 468
A G+ DE GE VG ++ EN++
Sbjct: 484 AIVVGLKDEHYGEVVGAFVQRAENSE 509
>gi|397730858|ref|ZP_10497612.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
gi|396933248|gb|EJJ00404.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
Length = 506
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 76/165 (46%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ +V DH++ P GT GE+ ++G M GYW T + D WLRTG
Sbjct: 325 LEVEVRDHDDTACPPGTVGEVFVKGATVMKGYWNRPSDTAAVLDADGWLRTG-------- 376
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + DG ++V R+KD+IIRGG N+YP
Sbjct: 377 -----------------------------DLGEIDADGDLRIVDRVKDLIIRGGYNVYPS 407
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
E+EE + THP++LEA GVPD+ GEEV + + L+ E
Sbjct: 408 EVEEVLYTHPDILEAAVVGVPDDHYGEEVAAVVATVPGSGLDGGE 452
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DG ++V R+KD+IIRGG N+YP E+EE + THP++LEA GVPD+ GEEV +
Sbjct: 384 DGDLRIVDRVKDLIIRGGYNVYPSEVEEVLYTHPDILEAAVVGVPDDHYGEEVAAVVATV 443
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+ L+ ++ ++ + ++S +
Sbjct: 444 PGSGLDGGELTSWARERLSAY 464
>gi|295105788|emb|CBL03331.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[Gordonibacter pamelaeae 7-10-1-b]
Length = 565
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 78/155 (50%), Gaps = 38/155 (24%)
Query: 21 AKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+V+D + I G PGEL +G+ M GY++ + T E I D +L +G
Sbjct: 389 VRVIDPADGHICAPGEPGELCCKGYNVMKGYYKMPEATAEAIDADGYLHSG--------- 439
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + EDGY +V GRIKDMIIRGGENIYP E
Sbjct: 440 ----------------------------DLGTVDEDGYYRVTGRIKDMIIRGGENIYPLE 471
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
+E F+ T P VL+A G+PDER+GE VG I+++
Sbjct: 472 VENFLLTMPGVLDAQVVGIPDERLGEIVGAFIRVR 506
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDGY +V GRIKDMIIRGGENIYP E+E F+ T P VL+A G+PDER+GE V
Sbjct: 440 DLGTVDEDGYYRVTGRIKDMIIRGGENIYPLEVENFLLTMPGVLDAQVVGIPDERLGEIV 499
Query: 458 GISIKLKEN-AKLNADDIRTFCKGKVSKF 485
G I+++ + DD+R F +++++
Sbjct: 500 GAFIRVRPGYEAMTEDDVRAFSIPRIARY 528
>gi|52079556|ref|YP_078347.1| acyl-CoA synthetase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319646655|ref|ZP_08000884.1| hypothetical protein HMPREF1012_01921 [Bacillus sp. BT1B_CT2]
gi|404488423|ref|YP_006712529.1| acyl-CoA synthetase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52002767|gb|AAU22709.1| long-chain fatty-acid-CoA ligase [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52347422|gb|AAU40056.1| aceto-acyl-CoA ligase YngI [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317391243|gb|EFV72041.1| hypothetical protein HMPREF1012_01921 [Bacillus sp. BT1B_CT2]
Length = 539
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 58/79 (73%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY ++ GR+KDMI+RGGENIYP+EIEEF+ H ++++ GVPDE+ GE+ IK +
Sbjct: 421 DGYVRITGRLKDMIVRGGENIYPREIEEFLYEHEDIVDVQVVGVPDEKYGEKTAAFIKCR 480
Query: 465 ENAKLNADDIRTFCKGKVS 483
KL +D+R FCKG++S
Sbjct: 481 PGKKLTLEDVRDFCKGQLS 499
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 71/144 (49%), Gaps = 37/144 (25%)
Query: 37 GELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQ 96
GEL RG+ M GY++ ++ TK+ I D WL TG
Sbjct: 380 GELCTRGYLVMKGYYKMDEATKKAIDEDGWLHTG-------------------------- 413
Query: 97 QQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAY 156
D + DGY ++ GR+KDMI+RGGENIYP+EIEEF+ H ++++
Sbjct: 414 -----------DLAEMDRDGYVRITGRLKDMIVRGGENIYPREIEEFLYEHEDIVDVQVV 462
Query: 157 GVPDERMGEEVGISIKLKENAKLN 180
GVPDE+ GE+ IK + KL
Sbjct: 463 GVPDEKYGEKTAAFIKCRPGKKLT 486
>gi|336388286|gb|EGO29430.1| hypothetical protein SERLADRAFT_412932 [Serpula lacrymans var.
lacrymans S7.9]
Length = 645
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 80/165 (48%), Gaps = 31/165 (18%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+AKVVD IVP G PGE+ + G+ GYW+D ++T + D
Sbjct: 449 VKAKVVDGEGNIVPIGKPGEIYVSGYLVQKGYWKDPEQTNRVMHGD-------------- 494
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
+ G + D+ ++ E+G+ ++VGR KD+IIRGGEN++P
Sbjct: 495 -----------------TKDKGTIWMSTGDEGIMDEEGFLRIVGRTKDIIIRGGENLFPV 537
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
+IE + HPNV EA A VPD + GE VG I + + L E
Sbjct: 538 QIENVLTAHPNVSEAAAVSVPDAKYGEVVGAWIVTRPDITLEKEE 582
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 54/80 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ ++ E+G+ ++VGR KD+IIRGGEN++P +IE + HPNV EA A VPD + GE V
Sbjct: 507 DEGIMDEEGFLRIVGRTKDIIIRGGENLFPVQIENVLTAHPNVSEAAAVSVPDAKYGEVV 566
Query: 458 GISIKLKENAKLNADDIRTF 477
G I + + L +++R F
Sbjct: 567 GAWIVTRPDITLEKEEVRRF 586
>gi|111018508|ref|YP_701480.1| AMP-dependent synthetase/ligase [Rhodococcus jostii RHA1]
gi|110818038|gb|ABG93322.1| AMP-dependent synthetase [Rhodococcus jostii RHA1]
Length = 506
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 76/165 (46%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ +V DH++ P GT GE+ ++G M GYW T + D WLRTG
Sbjct: 325 LEVEVRDHDDTACPPGTVGEVFVKGATVMKGYWNRPSDTAAVLDADGWLRTG-------- 376
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + DG ++V R+KD+IIRGG N+YP
Sbjct: 377 -----------------------------DLGEIDADGDLRIVDRVKDLIIRGGYNVYPS 407
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
E+EE + THP++LEA GVPD+ GEEV + + L+ E
Sbjct: 408 EVEEVLYTHPDILEAAVVGVPDDHYGEEVAAVVATVPGSGLDGGE 452
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DG ++V R+KD+IIRGG N+YP E+EE + THP++LEA GVPD+ GEEV +
Sbjct: 384 DGDLRIVDRVKDLIIRGGYNVYPSEVEEVLYTHPDILEAAVVGVPDDHYGEEVAAVVATV 443
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+ L+ ++ ++ + ++S +
Sbjct: 444 PGSGLDGGELTSWARERLSAY 464
>gi|325959830|ref|YP_004291296.1| long-chain-fatty-acid--CoA ligase [Methanobacterium sp. AL-21]
gi|325331262|gb|ADZ10324.1| Long-chain-fatty-acid--CoA ligase [Methanobacterium sp. AL-21]
Length = 552
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 68/135 (50%), Gaps = 37/135 (27%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G PGE+ RG+ M GY++ KTKE I D WL +G
Sbjct: 385 GQPGEICCRGYNVMKGYYKMPDKTKEAIEEDGWLHSG----------------------- 421
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D + +DGY +VGRIKDMIIRGGENIYP+EIEEFI T P V +
Sbjct: 422 --------------DLATVDKDGYYTIVGRIKDMIIRGGENIYPREIEEFIHTMPEVQDV 467
Query: 154 YAYGVPDERMGEEVG 168
G+PDE+ GE VG
Sbjct: 468 QVVGIPDEKYGEIVG 482
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Query: 386 VPDSAGRSIFEK------DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
+PD +I E D + +DGY +VGRIKDMIIRGGENIYP+EIEEFI T P
Sbjct: 404 MPDKTKEAIEEDGWLHSGDLATVDKDGYYTIVGRIKDMIIRGGENIYPREIEEFIHTMPE 463
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
V + G+PDE+ GE VG + +++ L +D+R + K++++
Sbjct: 464 VQDVQVVGIPDEKYGEIVGAFVIPEKDVDLEEEDVRDYALQKIARY 509
>gi|423681526|ref|ZP_17656365.1| acyl-CoA synthetase [Bacillus licheniformis WX-02]
gi|383438300|gb|EID46075.1| acyl-CoA synthetase [Bacillus licheniformis WX-02]
Length = 539
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 58/79 (73%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY ++ GR+KDMI+RGGENIYP+EIEEF+ H ++++ GVPDE+ GE+ IK +
Sbjct: 421 DGYVRITGRLKDMIVRGGENIYPREIEEFLYEHEDIVDVQVVGVPDEKYGEKTAAFIKCR 480
Query: 465 ENAKLNADDIRTFCKGKVS 483
KL +D+R FCKG++S
Sbjct: 481 PGKKLTLEDVRDFCKGQLS 499
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 71/144 (49%), Gaps = 37/144 (25%)
Query: 37 GELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQ 96
GEL RG+ M GY++ ++ TK+ I D WL TG
Sbjct: 380 GELCTRGYLVMKGYYKMDEATKKAIDEDGWLHTG-------------------------- 413
Query: 97 QQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAY 156
D + DGY ++ GR+KDMI+RGGENIYP+EIEEF+ H ++++
Sbjct: 414 -----------DLAEMDRDGYVRITGRLKDMIVRGGENIYPREIEEFLYEHEDIVDVQVV 462
Query: 157 GVPDERMGEEVGISIKLKENAKLN 180
GVPDE+ GE+ IK + KL
Sbjct: 463 GVPDEKYGEKTAAFIKCRPGKKLT 486
>gi|349573727|ref|ZP_08885700.1| AMP-binding domain protein [Neisseria shayeganii 871]
gi|348014683|gb|EGY53554.1| AMP-binding domain protein [Neisseria shayeganii 871]
Length = 577
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 83/179 (46%), Gaps = 41/179 (22%)
Query: 5 NPTDLQFST--LSSSSFQAKVVDH-NNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P D + ST L + K+VD IVP G GEL +G+ M GYW E +T++ I
Sbjct: 386 TPIDKRVSTVGLVQPHLEVKIVDVITGEIVPCGESGELCTKGYSVMQGYWGSEAQTRDAI 445
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ TG D + EDGY ++V
Sbjct: 446 -RDGWMHTG-------------------------------------DLATMDEDGYVKIV 467
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
GRIKDM+IRGGENIYP EIE F+ H ++ + GVPD GE + I +KE L+
Sbjct: 468 GRIKDMVIRGGENIYPTEIEGFLYRHESIQDVQIVGVPDAHFGEVLAAWIIVKEGHTLD 526
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDGY ++VGRIKDM+IRGGENIYP EIE F+ H ++ + GVPD GE +
Sbjct: 454 DLATMDEDGYVKIVGRIKDMVIRGGENIYPTEIEGFLYRHESIQDVQIVGVPDAHFGEVL 513
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I +KE L+ + +R FCKG ++ +
Sbjct: 514 AAWIIVKEGHTLDEEGVREFCKGNIAHY 541
>gi|291278972|ref|YP_003495807.1| acyl-CoA synthase [Deferribacter desulfuricans SSM1]
gi|290753674|dbj|BAI80051.1| acyl-CoA synthase [Deferribacter desulfuricans SSM1]
Length = 551
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
EDGY + GRIKDMIIRGGENIYPKEIE+F+ T+ + + GVPD++ GEEV IKL
Sbjct: 427 EDGYYVITGRIKDMIIRGGENIYPKEIEDFLYTYDAIEDVQIVGVPDKKYGEEVMAFIKL 486
Query: 464 KEN--AKLNADDIRTFCKGKVSKF 485
K K+ DDIR FCKGK++ +
Sbjct: 487 KPKYRGKVTPDDIRAFCKGKIADY 510
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 77/156 (49%), Gaps = 38/156 (24%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD + P GEL RG+ M GY++ E+ TK+ I D WL TG
Sbjct: 369 EVKIVDPTTGKECPPNVAGELCARGYNVMKGYYKMEEATKKAIDEDGWLHTG-------- 420
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + EDGY + GRIKDMIIRGGENIYPK
Sbjct: 421 -----------------------------DLALKTEDGYYVITGRIKDMIIRGGENIYPK 451
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
EIE+F+ T+ + + GVPD++ GEEV IKLK
Sbjct: 452 EIEDFLYTYDAIEDVQIVGVPDKKYGEEVMAFIKLK 487
>gi|91772692|ref|YP_565384.1| AMP-binding domain protein [Methanococcoides burtonii DSM 6242]
gi|91711707|gb|ABE51634.1| fatty-acid--CoA ligase [Methanococcoides burtonii DSM 6242]
Length = 547
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 86/179 (48%), Gaps = 40/179 (22%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + + ST+ +S K+VD IV GE+ RG+ M GY++ + T I
Sbjct: 355 DPIERRVSTVGTSLEHIDVKIVDSETGEIVGPNEQGEICCRGYNVMKGYYKMPEMTNRAI 414
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL +G D + EDGY ++
Sbjct: 415 DKDGWLHSG-------------------------------------DLATVDEDGYYRIT 437
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
GRIKDMIIRGGENIYP+EIEEF+ T + +A G+PDE+ GE VG + LKE +KL
Sbjct: 438 GRIKDMIIRGGENIYPREIEEFLYTIEGIKDAQVIGIPDEKYGEIVGAFVVLKEGSKLT 496
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDGY ++ GRIKDMIIRGGENIYP+EIEEF+ T + +A G+PDE+ GE V
Sbjct: 424 DLATVDEDGYYRITGRIKDMIIRGGENIYPREIEEFLYTIEGIKDAQVIGIPDEKYGEIV 483
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
G + LKE +KL +DIR F K++++
Sbjct: 484 GAFVVLKEGSKLTPEDIRDFSITKIARY 511
>gi|297622914|ref|YP_003704348.1| AMP-dependent synthetase and ligase [Truepera radiovictrix DSM
17093]
gi|297164094|gb|ADI13805.1| AMP-dependent synthetase and ligase [Truepera radiovictrix DSM
17093]
Length = 521
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 77/159 (48%), Gaps = 38/159 (23%)
Query: 22 KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSA 81
KVVD ++ +P G PGEL++RGH M GY+ + T E + W TG
Sbjct: 355 KVVDERDQELPPGEPGELVVRGHNVMKGYYGRPEATAEAMR-GGWFHTG----------- 402
Query: 82 MAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIE 141
D EDGY +V R+KDMIIRGG N+YP+E+E
Sbjct: 403 --------------------------DVATRDEDGYFTIVDRLKDMIIRGGFNVYPREVE 436
Query: 142 EFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
E + THP V A GVPDE+ GEEV + L+E + L
Sbjct: 437 EVLMTHPEVSLAAVVGVPDEQYGEEVKAFVVLQEGSSLT 475
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 56/82 (68%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
EDGY +V R+KDMIIRGG N+YP+E+EE + THP V A GVPDE+ GEEV + L
Sbjct: 409 EDGYFTIVDRLKDMIIRGGFNVYPREVEEVLMTHPEVSLAAVVGVPDEQYGEEVKAFVVL 468
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
+E + L + +R + K +++ +
Sbjct: 469 QEGSSLTPEGLRDWSKERLAAY 490
>gi|452825864|gb|EME32859.1| long-chain acyl-CoA synthetase [Galdieria sulphuraria]
Length = 553
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 82/164 (50%), Gaps = 38/164 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ ++D ++ VP G PGE+ +RGHC M GY++ ++T E + + W TG
Sbjct: 380 EMAILDEKDQPVPDGQPGEVCVRGHCVMKGYFKRPKETAEAMR-NGWFHTG--------- 429
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + DG ++V R KDMIIRGG N+YP+E
Sbjct: 430 ----------------------------DVGIRDPDGSYRIVDRTKDMIIRGGLNVYPRE 461
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
IEE + HP V EA G+P+ER+GEE+ I KE ++++ E
Sbjct: 462 IEEVLYMHPAVAEAAVVGIPNERLGEEIAAYICKKEGHEVSSEE 505
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 52/75 (69%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DG ++V R KDMIIRGG N+YP+EIEE + HP V EA G+P+ER+GEE+ I K
Sbjct: 437 DGSYRIVDRTKDMIIRGGLNVYPREIEEVLYMHPAVAEAAVVGIPNERLGEEIAAYICKK 496
Query: 465 ENAKLNADDIRTFCK 479
E +++++++ CK
Sbjct: 497 EGHEVSSEELTEHCK 511
>gi|282164394|ref|YP_003356779.1| putative acyl-CoA synthetase [Methanocella paludicola SANAE]
gi|282156708|dbj|BAI61796.1| putative acyl-CoA synthetase [Methanocella paludicola SANAE]
Length = 569
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 40/187 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P + + ST+ + K+VD ++VP G PGE+ RG+ M GY+++++ T +
Sbjct: 369 DPLEKRVSTVGQPMPHCELKIVDPKTGKMVPRGQPGEICARGYMIMRGYYKNKEATDLAV 428
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ WL TG D L ++ Y ++
Sbjct: 429 DEEGWLHTG-------------------------------------DLGTLDDEDYCKIT 451
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+KDM+IRGGENIYP+E+EEF+ HP + + GVPD + GEE+ IKLK + +
Sbjct: 452 GRLKDMVIRGGENIYPREVEEFLYEHPAISDVQVIGVPDMKYGEELCAWIKLKNGSVMTP 511
Query: 182 YEDKSIS 188
E K+
Sbjct: 512 DEIKAFC 518
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D L ++ Y ++ GR+KDM+IRGGENIYP+E+EEF+ HP + + GVPD + GEE+
Sbjct: 438 DLGTLDDEDYCKITGRLKDMVIRGGENIYPREVEEFLYEHPAISDVQVIGVPDMKYGEEL 497
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IKLK + + D+I+ FCKGK++ +
Sbjct: 498 CAWIKLKNGSVMTPDEIKAFCKGKIAHY 525
>gi|399545197|ref|YP_006558505.1| long-chain-fatty-acid--CoA ligase [Marinobacter sp. BSs20148]
gi|399160529|gb|AFP31092.1| Long-chain-fatty-acid--CoA ligase [Marinobacter sp. BSs20148]
Length = 559
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 74/148 (50%), Gaps = 37/148 (25%)
Query: 22 KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSA 81
K VD +N PFG GEL ++G M GYW+ T++++ D +LRTG
Sbjct: 392 KTVDDDNNETPFGERGELCVKGPQVMRGYWQRPDDTRKSMTDDGYLRTG----------- 440
Query: 82 MAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIE 141
D V++EDGY ++V R KDMII G N++P E+E
Sbjct: 441 --------------------------DVAVIQEDGYIRIVDRKKDMIIVSGFNVFPNEVE 474
Query: 142 EFIQTHPNVLEAYAYGVPDERMGEEVGI 169
+ I HPNVLE A G+PDE+ GE V +
Sbjct: 475 DVISGHPNVLECAAVGIPDEKSGEAVKV 502
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V++EDGY ++V R KDMII G N++P E+E+ I HPNVLE A G+PDE+ GE V
Sbjct: 441 DVAVIQEDGYIRIVDRKKDMIIVSGFNVFPNEVEDVISGHPNVLECAAVGIPDEKSGEAV 500
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ + + + A +++ FC+ +++ +
Sbjct: 501 KVFL-IASKEGVTAGELKEFCRERLTAY 527
>gi|395008921|ref|ZP_10392512.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acidovorax
sp. CF316]
gi|394313051|gb|EJE50135.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acidovorax
sp. CF316]
Length = 575
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 78/163 (47%), Gaps = 38/163 (23%)
Query: 19 FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+V+ + VP G GE RG+ M GYW DE KT+E I D W+ TG
Sbjct: 394 LEVKIVNPDTGATVPVGERGEFCTRGYSVMHGYWGDEAKTREAIDADGWMHTG------- 446
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + +GY +VGRIKDM+IRGGENIYP
Sbjct: 447 ------------------------------DLATMDAEGYVNIVGRIKDMVIRGGENIYP 476
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
+EIEEF+ HP V + GVPD R GEE+ I +K +L
Sbjct: 477 REIEEFLYRHPQVQDVQVVGVPDARYGEELCAWIVVKPGQELT 519
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGRIKDM+IRGGENIYP+EIEEF+ HP V + GVPD R GEE+
Sbjct: 447 DLATMDAEGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPQVQDVQVVGVPDARYGEEL 506
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I +K +L + +R FCKG+++ +
Sbjct: 507 CAWIVVKPGQELTEEAVRAFCKGQIAHY 534
>gi|83774825|dbj|BAE64948.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 618
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 86/180 (47%), Gaps = 45/180 (25%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNR--IVPFGTPGELLIRGHCNMLGYWEDEQKTKET 60
+P D + +T+ +AK+V+ +R I+P G PGEL + G+ M YW D Q+T E+
Sbjct: 410 DPIDKRINTVGRLMPHVEAKIVNPADRSQILPVGVPGELAVSGYLLMKEYWGDPQRTAES 469
Query: 61 IGPDR----WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDG 116
+ D W+ +G D+ + DG
Sbjct: 470 MIADEKGKVWMHSG-------------------------------------DEATISPDG 492
Query: 117 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
Y + GRIKD+IIRGGENI+P EIE I TH V++ GVPDE+ GE V I KE+
Sbjct: 493 YVTITGRIKDLIIRGGENIHPLEIENCILTHAGVMDVSVVGVPDEKYGEVVAAFIIPKEH 552
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ + DGY + GRIKD+IIRGGENI+P EIE I TH V++ GVPDE+ GE V
Sbjct: 484 DEATISPDGYVTITGRIKDLIIRGGENIHPLEIENCILTHAGVMDVSVVGVPDEKYGEVV 543
Query: 458 GISIKLKEN----AKLNADDIRTFCKGKVS 483
I KE+ A L ++IR + +G++S
Sbjct: 544 AAFIIPKEHQDEAAPLTEENIREWVRGRLS 573
>gi|242805924|ref|XP_002484634.1| long-chain-fatty-acid-CoA ligase, putative [Talaromyces stipitatus
ATCC 10500]
gi|218715259|gb|EED14681.1| long-chain-fatty-acid-CoA ligase, putative [Talaromyces stipitatus
ATCC 10500]
Length = 598
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 78/163 (47%), Gaps = 42/163 (25%)
Query: 21 AKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR----WLRTGRYKKT 75
AK++D R +P G GEL + G+ GYW+D QKT +T+ D WLRTG
Sbjct: 404 AKIIDPKTGRTLPIGERGELCMSGYQVHNGYWKDPQKTADTLLRDEDGRVWLRTG----- 458
Query: 76 SFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENI 135
D+ V EDGY + GR KD+IIRGGENI
Sbjct: 459 --------------------------------DEAVFDEDGYCTITGRFKDIIIRGGENI 486
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAK 178
YP EIEE + HP + A G+PD GE VG I+L+ + K
Sbjct: 487 YPLEIEERLGRHPAISHAAVIGIPDGHYGEVVGAFIELELDIK 529
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ V EDGY + GR KD+IIRGGENIYP EIEE + HP + A G+PD GE V
Sbjct: 459 DEAVFDEDGYCTITGRFKDIIIRGGENIYPLEIEERLGRHPAISHAAVIGIPDGHYGEVV 518
Query: 458 GISIKLKENAKL--NADDIR 475
G I+L+ + K +A+++R
Sbjct: 519 GAFIELELDIKALPSAEELR 538
>gi|148550573|ref|YP_001260012.1| AMP-binding protein [Sphingomonas wittichii RW1]
gi|148502992|gb|ABQ71245.1| AMP-dependent synthetase and ligase [Sphingomonas wittichii RW1]
Length = 518
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 37/162 (22%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+AK+V N + GE RG+ M GYW D +KT + I + W+ +G
Sbjct: 343 EAKIVGLNGETLQVNQQGEYCSRGYAVMQGYWNDPEKTDDAIDAEGWMHSG--------- 393
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D V+ E GY ++ GRIKDMIIRGGENIYP+E
Sbjct: 394 ----------------------------DLAVMDERGYVRITGRIKDMIIRGGENIYPRE 425
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
+EEF+ HP +++ +GV D + GEEV + + +L+A
Sbjct: 426 LEEFLLGHPLIVDVQVFGVSDAKFGEEVCAWVIARAGHRLSA 467
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E GY ++ GRIKDMIIRGGENIYP+E+EEF+ HP +++ +GV D + GEEV
Sbjct: 394 DLAVMDERGYVRITGRIKDMIIRGGENIYPRELEEFLLGHPLIVDVQVFGVSDAKFGEEV 453
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ + +L+ADD+ C+GK++ +
Sbjct: 454 CAWVIARAGHRLSADDVIAHCRGKIAHY 481
>gi|333912279|ref|YP_004486011.1| long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
gi|333742479|gb|AEF87656.1| Long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
Length = 572
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 77/163 (47%), Gaps = 38/163 (23%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K+VD +V G GEL RG+ M GYW DE +T+E I + W+ TG
Sbjct: 391 LEVKIVDPATGEVVAPGVSGELCTRGYSVMHGYWGDEARTREAIDDEAWMHTG------- 443
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + E GY +VGRIKDM+IRGGENIYP
Sbjct: 444 ------------------------------DLATMDEQGYVNIVGRIKDMVIRGGENIYP 473
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
+EIEEF+ HP V + GVPD R GEE+ I +K L
Sbjct: 474 REIEEFLYRHPQVQDVQVVGVPDARYGEELCAWIIVKPGQALT 516
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY +VGRIKDM+IRGGENIYP+EIEEF+ HP V + GVPD R GEE+
Sbjct: 444 DLATMDEQGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPQVQDVQVVGVPDARYGEEL 503
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I +K L D +R FCKG+++ +
Sbjct: 504 CAWIIVKPGQALTEDGVRDFCKGQIAHY 531
>gi|317156886|ref|XP_001826081.2| AMP-binding enzyme [Aspergillus oryzae RIB40]
gi|391864964|gb|EIT74256.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Aspergillus
oryzae 3.042]
Length = 624
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 86/180 (47%), Gaps = 45/180 (25%)
Query: 5 NPTDLQFSTLSS--SSFQAKVVDHNNR--IVPFGTPGELLIRGHCNMLGYWEDEQKTKET 60
+P D + +T+ +AK+V+ +R I+P G PGEL + G+ M YW D Q+T E+
Sbjct: 416 DPIDKRINTVGRLMPHVEAKIVNPADRSQILPVGVPGELAVSGYLLMKEYWGDPQRTAES 475
Query: 61 IGPDR----WLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDG 116
+ D W+ +G D+ + DG
Sbjct: 476 MIADEKGKVWMHSG-------------------------------------DEATISPDG 498
Query: 117 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
Y + GRIKD+IIRGGENI+P EIE I TH V++ GVPDE+ GE V I KE+
Sbjct: 499 YVTITGRIKDLIIRGGENIHPLEIENCILTHAGVMDVSVVGVPDEKYGEVVAAFIIPKEH 558
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D+ + DGY + GRIKD+IIRGGENI+P EIE I TH V++ GVPDE+ GE V
Sbjct: 490 DEATISPDGYVTITGRIKDLIIRGGENIHPLEIENCILTHAGVMDVSVVGVPDEKYGEVV 549
Query: 458 GISIKLKEN----AKLNADDIRTFCKGKVS 483
I KE+ A L ++IR + +G++S
Sbjct: 550 AAFIIPKEHQDEAAPLTEENIREWVRGRLS 579
>gi|126667412|ref|ZP_01738384.1| acyl-CoA synthase [Marinobacter sp. ELB17]
gi|126628168|gb|EAZ98793.1| acyl-CoA synthase [Marinobacter sp. ELB17]
Length = 559
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 74/148 (50%), Gaps = 37/148 (25%)
Query: 22 KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSA 81
K VD +N PFG GEL ++G M GYW+ T++++ D +LRTG
Sbjct: 392 KTVDDDNNETPFGERGELCVKGPQVMRGYWQRPDDTRKSMTDDGYLRTG----------- 440
Query: 82 MAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIE 141
D V++EDGY ++V R KDMII G N++P E+E
Sbjct: 441 --------------------------DVAVIQEDGYIRIVDRKKDMIIVSGFNVFPNEVE 474
Query: 142 EFIQTHPNVLEAYAYGVPDERMGEEVGI 169
+ I HPNVLE A G+PDE+ GE V +
Sbjct: 475 DVISGHPNVLECAAVGIPDEKSGEAVKV 502
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V++EDGY ++V R KDMII G N++P E+E+ I HPNVLE A G+PDE+ GE V
Sbjct: 441 DVAVIQEDGYIRIVDRKKDMIIVSGFNVFPNEVEDVISGHPNVLECAAVGIPDEKSGEAV 500
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ + + + A +++ FC+ +++ +
Sbjct: 501 KVYL-IASKEGVTAGELKEFCRERLTAY 527
>gi|365098013|ref|ZP_09331777.1| AMP-binding domain protein [Acidovorax sp. NO-1]
gi|363413149|gb|EHL20358.1| AMP-binding domain protein [Acidovorax sp. NO-1]
Length = 576
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 80/166 (48%), Gaps = 40/166 (24%)
Query: 5 NPTDLQFSTLSSSS--FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P D + ST+ + K+VD + VP G GE +G+ M GYWED KT+E I
Sbjct: 379 TPLDKRVSTVGQVQPHLEIKIVDPDTGSTVPIGQRGEFCTKGYSVMHGYWEDAAKTQEAI 438
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ TG D + +GY +V
Sbjct: 439 DADGWMHTG-------------------------------------DLATMDAEGYVNIV 461
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
GRIKDM+IRGGENIYP+EIEEF+ HP V + GVPD++ GEE+
Sbjct: 462 GRIKDMVIRGGENIYPREIEEFLYRHPQVQDVQVVGVPDQKYGEEL 507
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 59/88 (67%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGRIKDM+IRGGENIYP+EIEEF+ HP V + GVPD++ GEE+
Sbjct: 448 DLATMDAEGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPQVQDVQVVGVPDQKYGEEL 507
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I K + DD+R FCKG+++ +
Sbjct: 508 CAWIIAKPGTQPTEDDVRAFCKGQIAHY 535
>gi|302392636|ref|YP_003828456.1| AMP-dependent synthetase and ligase [Acetohalobium arabaticum DSM
5501]
gi|302204713|gb|ADL13391.1| AMP-dependent synthetase and ligase [Acetohalobium arabaticum DSM
5501]
Length = 554
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 40/182 (21%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
N + + ST+ + + + K+V+ + + VP G GEL RG M GY++ ++T+ETI
Sbjct: 354 NSLERRVSTVGRALPNVEVKIVNPDTGKEVPPGVQGELCTRGFHVMEGYYKMPEETEETI 413
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL TG D ++ +DGY ++
Sbjct: 414 DGDGWLHTG-------------------------------------DLAIMDKDGYCKIT 436
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GR+K+MIIRGGEN+YP+E+EE HP + + G+PDE+ GEEV I+LK+ + A
Sbjct: 437 GRLKNMIIRGGENVYPREVEEHFYDHPKIKDVEVVGIPDEKYGEEVMAYIQLKDGEEATA 496
Query: 182 YE 183
E
Sbjct: 497 EE 498
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 59/86 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ +DGY ++ GR+K+MIIRGGEN+YP+E+EE HP + + G+PDE+ GEEV
Sbjct: 423 DLAIMDKDGYCKITGRLKNMIIRGGENVYPREVEEHFYDHPKIKDVEVVGIPDEKYGEEV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVS 483
I+LK+ + A++I + K ++S
Sbjct: 483 MAYIQLKDGEEATAEEIFNYFKDRIS 508
>gi|440701038|ref|ZP_20883253.1| AMP-binding enzyme [Streptomyces turgidiscabies Car8]
gi|440276317|gb|ELP64598.1| AMP-binding enzyme [Streptomyces turgidiscabies Car8]
Length = 497
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 77/164 (46%), Gaps = 38/164 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ +++D R G GEL +RG M GYW ++T TI PD WLRTG +
Sbjct: 330 EVRLLDEAGREAAPGEIGELAVRGPNLMKGYWNRPEETAATI-PDGWLRTGDLARQD--- 385
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
EDGY +V R KD+IIRGG N+YP+E
Sbjct: 386 ----------------------------------EDGYLFIVDRKKDLIIRGGYNVYPRE 411
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
IEE + HP V G+PDER+GEEV ++ L+ A+ A E
Sbjct: 412 IEEVLHEHPAVALTAVLGLPDERLGEEVAAAVVLRPGAEATAEE 455
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Query: 380 EEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
EE T+PD R+ D EDGY +V R KD+IIRGG N+YP+EIEE + HP
Sbjct: 365 EETAATIPDGWLRT---GDLARQDEDGYLFIVDRKKDLIIRGGYNVYPREIEEVLHEHPA 421
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
V G+PDER+GEEV ++ L+ A+ A++++ F + +V+ +
Sbjct: 422 VALTAVLGLPDERLGEEVAAAVVLRPGAEATAEELQEFVRERVAAY 467
>gi|319764461|ref|YP_004128398.1| AMP-dependent synthetase/ligase [Alicycliphilus denitrificans BC]
gi|317119022|gb|ADV01511.1| AMP-dependent synthetase and ligase [Alicycliphilus denitrificans
BC]
Length = 573
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 86/183 (46%), Gaps = 42/183 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P + + ST+ + K+VD +VP G GEL RG+ M GYW D +KT+E I
Sbjct: 376 TPLEKRVSTVGRVQPHLEVKIVDPETGAVVPRGGRGELCTRGYSVMHGYWGDPEKTREAI 435
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ TG D + +GY +V
Sbjct: 436 DADGWMHTG-------------------------------------DLATMDGEGYVNIV 458
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIKDM+IRGGEN+YP+EIEEF+ HP V + GVPDE+ GEE+ I K N
Sbjct: 459 GRIKDMVIRGGENLYPREIEEFLYRHPQVQDVQVVGVPDEKYGEELCAWIIAKPGT--NP 516
Query: 182 YED 184
ED
Sbjct: 517 TED 519
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGRIKDM+IRGGEN+YP+EIEEF+ HP V + GVPDE+ GEE+
Sbjct: 445 DLATMDGEGYVNIVGRIKDMVIRGGENLYPREIEEFLYRHPQVQDVQVVGVPDEKYGEEL 504
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I K DDIR FCKG+++ +
Sbjct: 505 CAWIIAKPGTNPTEDDIRAFCKGQIAHY 532
>gi|351732883|ref|ZP_08950574.1| AMP-binding domain protein [Acidovorax radicis N35]
Length = 577
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 82/166 (49%), Gaps = 40/166 (24%)
Query: 5 NPTDLQFSTLSSSS--FQAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P D + ST+ + ++VD ++ +VP G GE RG+ M GYW DE KT+E I
Sbjct: 380 TPLDKRVSTVGQVQPHLEVQIVDPDSGAVVPVGQRGEFCTRGYSVMHGYWGDEAKTREAI 439
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ W+ TG D + ++GY +V
Sbjct: 440 DAEGWMHTG-------------------------------------DLATMDDEGYVNIV 462
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
GRIKDM+IRGGENIYP+EIEEF+ HP V + GVPD + GEE+
Sbjct: 463 GRIKDMVIRGGENIYPREIEEFLYRHPQVQDVQVVGVPDAKYGEEL 508
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + ++GY +VGRIKDM+IRGGENIYP+EIEEF+ HP V + GVPD + GEE+
Sbjct: 449 DLATMDDEGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPQVQDVQVVGVPDAKYGEEL 508
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I K DDIR FCKG+++ +
Sbjct: 509 CAWIIAKPGTTPTEDDIRAFCKGQIAHY 536
>gi|429851406|gb|ELA26596.1| 4-coumarate- ligase [Colletotrichum gloeosporioides Nara gc5]
Length = 541
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 41/168 (24%)
Query: 21 AKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDR----WLRTGRYKKTS 76
AK+VD + IVP G GEL + G+ GYW + +KT E + D WL TG
Sbjct: 384 AKIVDRDGNIVPMGERGELCMAGYQLQAGYWNNSEKTNEVMVRDSAGVLWLHTG------ 437
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
D+ V + GY + GR KD+IIRGGENIY
Sbjct: 438 -------------------------------DEAVFDDAGYCSITGRFKDIIIRGGENIY 466
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
P EIEE + HP++ +A G+ DE GE VG ++ EN++ +++
Sbjct: 467 PLEIEERLMAHPSISQAIVVGLKDEHYGEVVGAFVQRAENSEKPTFQE 514
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 384 ITVPDSAGRS-IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 442
+ V DSAG + D+ V + GY + GR KD+IIRGGENIYP EIEE + HP++ +
Sbjct: 423 VMVRDSAGVLWLHTGDEAVFDDAGYCSITGRFKDIIIRGGENIYPLEIEERLMAHPSISQ 482
Query: 443 AYAYGVPDERMGEEVGISIKLKENAK 468
A G+ DE GE VG ++ EN++
Sbjct: 483 AIVVGLKDEHYGEVVGAFVQRAENSE 508
>gi|330826677|ref|YP_004389980.1| long-chain-fatty-acid--CoA ligase [Alicycliphilus denitrificans
K601]
gi|329312049|gb|AEB86464.1| Long-chain-fatty-acid--CoA ligase [Alicycliphilus denitrificans
K601]
Length = 573
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 86/183 (46%), Gaps = 42/183 (22%)
Query: 5 NPTDLQFSTLS--SSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
P + + ST+ + K+VD +VP G GEL RG+ M GYW D +KT+E I
Sbjct: 376 TPLEKRVSTVGRVQPHLEVKIVDPETGAVVPRGGRGELCTRGYSVMHGYWGDPEKTREAI 435
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D W+ TG D + +GY +V
Sbjct: 436 DADGWMHTG-------------------------------------DLATMDGEGYVNIV 458
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
GRIKDM+IRGGEN+YP+EIEEF+ HP V + GVPDE+ GEE+ I K N
Sbjct: 459 GRIKDMVIRGGENLYPREIEEFLYRHPQVQDVQVVGVPDEKYGEELCAWIIAKPGT--NP 516
Query: 182 YED 184
ED
Sbjct: 517 TED 519
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + +GY +VGRIKDM+IRGGEN+YP+EIEEF+ HP V + GVPDE+ GEE+
Sbjct: 445 DLATMDGEGYVNIVGRIKDMVIRGGENLYPREIEEFLYRHPQVQDVQVVGVPDEKYGEEL 504
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I K DDIR FCKG+++ +
Sbjct: 505 CAWIIAKPGTNPTEDDIRAFCKGQIAHY 532
>gi|420866507|ref|ZP_15329896.1| long-chain fatty-acid--CoA ligase [Mycobacterium abscessus 4S-0303]
gi|420871298|ref|ZP_15334680.1| long-chain fatty-acid--CoA ligase [Mycobacterium abscessus
4S-0726-RA]
gi|420875748|ref|ZP_15339124.1| long-chain fatty-acid--CoA ligase [Mycobacterium abscessus
4S-0726-RB]
gi|420990221|ref|ZP_15453377.1| long-chain fatty-acid--CoA ligase [Mycobacterium abscessus 4S-0206]
gi|421046097|ref|ZP_15509097.1| long-chain fatty-acid--CoA ligase [Mycobacterium abscessus
4S-0116-S]
gi|392065223|gb|EIT91072.1| long-chain fatty-acid--CoA ligase [Mycobacterium abscessus 4S-0303]
gi|392067223|gb|EIT93071.1| long-chain fatty-acid--CoA ligase [Mycobacterium abscessus
4S-0726-RB]
gi|392070768|gb|EIT96615.1| long-chain fatty-acid--CoA ligase [Mycobacterium abscessus
4S-0726-RA]
gi|392184500|gb|EIV10151.1| long-chain fatty-acid--CoA ligase [Mycobacterium abscessus 4S-0206]
gi|392235550|gb|EIV61048.1| long-chain fatty-acid--CoA ligase [Mycobacterium abscessus
4S-0116-S]
Length = 500
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 77/169 (45%), Gaps = 38/169 (22%)
Query: 22 KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSA 81
++VD N P G PGE+ IRG M GYW + T E I PD W RTG
Sbjct: 330 RIVDDNGEDTPDGVPGEVAIRGENLMKGYWNRPEATAEAI-PDGWFRTG----------- 377
Query: 82 MAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIE 141
D DGY +V R KD+IIRGG N+YP+E+E
Sbjct: 378 --------------------------DIATRDSDGYYTIVDRKKDLIIRGGYNVYPREVE 411
Query: 142 EFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
E + HP V EA G+ +GEE+G ++ L+ ++ A E ++ D
Sbjct: 412 EVLYEHPAVAEAAVIGIKHADLGEEIGAAVALRPGMQVEAEELRAFVRD 460
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY +V R KD+IIRGG N+YP+E+EE + HP V EA G+ +GEE+G ++ L+
Sbjct: 385 DGYYTIVDRKKDLIIRGGYNVYPREVEEVLYEHPAVAEAAVIGIKHADLGEEIGAAVALR 444
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
++ A+++R F + +++ +
Sbjct: 445 PGMQVEAEELRAFVRDRLAAY 465
>gi|420985764|ref|ZP_15448929.1| long-chain fatty-acid--CoA ligase [Mycobacterium abscessus 4S-0206]
gi|392190616|gb|EIV16247.1| long-chain fatty-acid--CoA ligase [Mycobacterium abscessus 4S-0206]
Length = 500
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 77/169 (45%), Gaps = 38/169 (22%)
Query: 22 KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSA 81
++VD N P G PGE+ IRG M GYW + T E I PD W RTG
Sbjct: 330 RIVDDNGEDTPDGVPGEVAIRGENLMKGYWNRPEATAEAI-PDGWFRTG----------- 377
Query: 82 MAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIE 141
D DGY +V R KD+IIRGG N+YP+E+E
Sbjct: 378 --------------------------DIATRDSDGYYTIVDRKKDLIIRGGYNVYPREVE 411
Query: 142 EFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
E + HP V EA G+ +GEE+G ++ L+ ++ A E ++ D
Sbjct: 412 EVLYEHPAVAEAAVIGIKHADLGEEIGAAVALRPGMQVEAEELRAFVRD 460
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY +V R KD+IIRGG N+YP+E+EE + HP V EA G+ +GEE+G ++ L+
Sbjct: 385 DGYYTIVDRKKDLIIRGGYNVYPREVEEVLYEHPAVAEAAVIGIKHADLGEEIGAAVALR 444
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
++ A+++R F + +++ +
Sbjct: 445 PGMQVEAEELRAFVRDRLAAY 465
>gi|124485231|ref|YP_001029847.1| hypothetical protein Mlab_0404 [Methanocorpusculum labreanum Z]
gi|124362772|gb|ABN06580.1| AMP-dependent synthetase and ligase [Methanocorpusculum labreanum
Z]
Length = 605
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 80/170 (47%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+ D RIVP G GE+ RG+ M Y+ + TK+ I D WL +G
Sbjct: 422 EIKITDPKTGRIVPLGEKGEICARGYMKMKCYYNNPNATKQVIDKDGWLHSG-------- 473
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E+GY ++ GR+K+M+IRGGEN+YP+
Sbjct: 474 -----------------------------DLGTMDEEGYVRMAGRLKEMVIRGGENLYPR 504
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
EIEEF HP + + Y GVPD + GEE+ +K + + E K+ +
Sbjct: 505 EIEEFFHLHPKISDIYVIGVPDAKYGEELCAWVKAEPGTTITEEEIKAFA 554
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 58/87 (66%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E+GY ++ GR+K+M+IRGGEN+YP+EIEEF HP + + Y GVPD + GEE+
Sbjct: 474 DLGTMDEEGYVRMAGRLKEMVIRGGENLYPREIEEFFHLHPKISDIYVIGVPDAKYGEEL 533
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSK 484
+K + + ++I+ F GK+++
Sbjct: 534 CAWVKAEPGTTITEEEIKAFADGKIAR 560
>gi|21228494|ref|NP_634416.1| AMP-binding protein [Methanosarcina mazei Go1]
gi|20906978|gb|AAM32088.1| Long-chain-fatty-acid--CoA ligase [Methanosarcina mazei Go1]
Length = 545
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 88/179 (49%), Gaps = 40/179 (22%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + +VVD N+ VP T GE+ RG+ M GY++ ++TK I
Sbjct: 353 DPVELRVETVGKCFPGVEVRVVDPATNKPVPPNTVGEICCRGYNIMKGYYKMPEETKNVI 412
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ WL +G D E+GY ++
Sbjct: 413 DEEGWLHSG-------------------------------------DLGTCDENGYYRIT 435
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
GRIKDMIIRGGENIYP+EIEEF+ P V +A G+PD++ GE VG + L+++ L
Sbjct: 436 GRIKDMIIRGGENIYPREIEEFLHAMPGVKDAQVVGIPDKKYGEIVGAFVILEKDEDLT 494
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 75/127 (59%), Gaps = 4/127 (3%)
Query: 362 PNSM-DSEARIYHYKK--YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMI 418
PN++ + R Y+ K Y EE V D G + D E+GY ++ GRIKDMI
Sbjct: 384 PNTVGEICCRGYNIMKGYYKMPEETKNVIDEEGW-LHSGDLGTCDENGYYRITGRIKDMI 442
Query: 419 IRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFC 478
IRGGENIYP+EIEEF+ P V +A G+PD++ GE VG + L+++ L DIR +
Sbjct: 443 IRGGENIYPREIEEFLHAMPGVKDAQVVGIPDKKYGEIVGAFVILEKDEDLTEADIRDYA 502
Query: 479 KGKVSKF 485
K++++
Sbjct: 503 ISKIARY 509
>gi|452210916|ref|YP_007491030.1| Long-chain-fatty-acid--CoA ligase [Methanosarcina mazei Tuc01]
gi|452100818|gb|AGF97758.1| Long-chain-fatty-acid--CoA ligase [Methanosarcina mazei Tuc01]
Length = 545
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 88/179 (49%), Gaps = 40/179 (22%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +L+ T+ + +VVD N+ VP T GE+ RG+ M GY++ ++TK I
Sbjct: 353 DPVELRVETVGKCFPGVEVRVVDPATNKPVPPNTVGEICCRGYNIMKGYYKMPEETKNVI 412
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
+ WL +G D E+GY ++
Sbjct: 413 DEEGWLHSG-------------------------------------DLGTCDENGYYRIT 435
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
GRIKDMIIRGGENIYP+EIEEF+ P V +A G+PD++ GE VG + L+++ L
Sbjct: 436 GRIKDMIIRGGENIYPREIEEFLHAMPGVKDAQVVGIPDKKYGEIVGAFVILEKDEDLT 494
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 75/127 (59%), Gaps = 4/127 (3%)
Query: 362 PNSM-DSEARIYHYKK--YLREEENITVPDSAGRSIFEKDQFVLREDGYGQVVGRIKDMI 418
PN++ + R Y+ K Y EE V D G + D E+GY ++ GRIKDMI
Sbjct: 384 PNTVGEICCRGYNIMKGYYKMPEETKNVIDEEGW-LHSGDLGTCDENGYYRITGRIKDMI 442
Query: 419 IRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFC 478
IRGGENIYP+EIEEF+ P V +A G+PD++ GE VG + L+++ L DIR +
Sbjct: 443 IRGGENIYPREIEEFLHAMPGVKDAQVVGIPDKKYGEIVGAFVILEKDEDLTEADIRDYA 502
Query: 479 KGKVSKF 485
K++++
Sbjct: 503 ISKIARY 509
>gi|395495059|ref|ZP_10426638.1| AMP-binding domain protein [Pseudomonas sp. PAMC 25886]
Length = 545
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 73/165 (44%), Gaps = 37/165 (22%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
++K++D V G GEL RG+ MLGYW + + T+ I W+ TG
Sbjct: 368 LESKIIDEAGNTVARGQIGELCTRGYSVMLGYWNNPEATRGAIDEAGWMHTG-------- 419
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E GY + GR KDMIIRGGEN+YP+
Sbjct: 420 -----------------------------DLATMDEHGYVCIAGRNKDMIIRGGENVYPR 450
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYE 183
E+EEF THP V + G+PDER GE + IK N E
Sbjct: 451 ELEEFFFTHPAVADVQVIGIPDERYGEAIVAWIKFHPGHVANELE 495
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E GY + GR KDMIIRGGEN+YP+E+EEF THP V + G+PDER GE +
Sbjct: 420 DLATMDEHGYVCIAGRNKDMIIRGGENVYPRELEEFFFTHPAVADVQVIGIPDERYGEAI 479
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
IK N +++T+CKG+++ F
Sbjct: 480 VAWIKFHPGHVANELELQTWCKGRIAHF 507
>gi|295837137|ref|ZP_06824070.1| long-chain-fatty-acid-CoA ligase [Streptomyces sp. SPB74]
gi|295826370|gb|EFG64803.1| long-chain-fatty-acid-CoA ligase [Streptomyces sp. SPB74]
Length = 491
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 78/161 (48%), Gaps = 37/161 (22%)
Query: 17 SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTS 76
+ + V+D +P G GEL +RG M GYW+ + T E + PD LRTG +
Sbjct: 319 TGVELSVLDPEGAELPDGETGELAVRGPNVMKGYWQRPEATAEVLMPDGRLRTGDLAR-- 376
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
+ + GF+Y +V R KD+IIRGG N+Y
Sbjct: 377 -------------------RDEDGFYY----------------IVDRKKDLIIRGGYNVY 401
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA 177
P+E+EE + HP VLEA VPD R+GEEVG ++ L+ A
Sbjct: 402 PRELEEVLYEHPAVLEAAVLAVPDARLGEEVGAAVVLRPGA 442
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 55/82 (67%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
EDG+ +V R KD+IIRGG N+YP+E+EE + HP VLEA VPD R+GEEVG ++ L
Sbjct: 379 EDGFYYIVDRKKDLIIRGGYNVYPRELEEVLYEHPAVLEAAVLAVPDARLGEEVGAAVVL 438
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
+ A + +R + K +V+ +
Sbjct: 439 RPGAGETPESLRAWMKERVAAY 460
>gi|333986735|ref|YP_004519342.1| long-chain-fatty-acid--CoA ligase [Methanobacterium sp. SWAN-1]
gi|333824879|gb|AEG17541.1| Long-chain-fatty-acid--CoA ligase [Methanobacterium sp. SWAN-1]
Length = 552
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 80/166 (48%), Gaps = 40/166 (24%)
Query: 5 NPTDLQFSTLSSS--SFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETI 61
+P +++ ST+ + + K+VD V G PGE+ RG+ M GY++ +KT E I
Sbjct: 353 DPLEIRVSTVGKKMENCEVKIVDIETGETVGVGEPGEICCRGYNIMKGYYKMPEKTAEVI 412
Query: 62 GPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVV 121
D WL +G D E+GY VV
Sbjct: 413 DEDGWLHSG-------------------------------------DVLTQDENGYYTVV 435
Query: 122 GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 167
GR+KDMIIRGGEN+YP+EIEEFI P V + G+PDE+ GE V
Sbjct: 436 GRLKDMIIRGGENVYPREIEEFIHAMPEVRDVQVVGIPDEKYGEIV 481
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D E+GY VVGR+KDMIIRGGEN+YP+EIEEFI P V + G+PDE+ GE V
Sbjct: 422 DVLTQDENGYYTVVGRLKDMIIRGGENVYPREIEEFIHAMPEVRDVQVVGIPDEKYGEIV 481
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ +++ L +D+R K++++
Sbjct: 482 VAFVIPEDDVDLKEEDVRDHAIEKIARY 509
>gi|313215561|emb|CBY16243.1| unnamed protein product [Oikopleura dioica]
Length = 190
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 80/160 (50%), Gaps = 37/160 (23%)
Query: 14 LSSSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYK 73
L +AK++D N + + GEL+ RG+ GY +DE KT+E+ DR+ +TG
Sbjct: 5 LPYPGIEAKIIDENEKTLLRNEVGELVTRGYMVFQGYVKDEAKTEESYTKDRFWKTG--- 61
Query: 74 KTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGE 133
D ++R+DG +++GR KDMIIRGGE
Sbjct: 62 ----------------------------------DLALVRDDGTLKIMGRSKDMIIRGGE 87
Query: 134 NIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 173
NI P EIE F+ TH + +AY GVP R+GEEV ++L
Sbjct: 88 NIQPTEIENFLTTHSKIKDAYVIGVPSARLGEEVCAYVQL 127
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++R+DG +++GR KDMIIRGGENI P EIE F+ TH + +AY GVP R+GEEV
Sbjct: 62 DLALVRDDGTLKIMGRSKDMIIRGGENIQPTEIENFLTTHSKIKDAYVIGVPSARLGEEV 121
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
++L + + ++I+ + ++K+
Sbjct: 122 CAYVQLIDGETITDEEIKKYALEGLAKY 149
>gi|433459238|ref|ZP_20417071.1| AMP-dependent synthetase and ligase [Arthrobacter crystallopoietes
BAB-32]
gi|432191472|gb|ELK48421.1| AMP-dependent synthetase and ligase [Arthrobacter crystallopoietes
BAB-32]
Length = 545
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDGY + GR+KDM+IRGGENIYP+EIE+F+ HP++ + GVPDE+ GEE+
Sbjct: 422 DLASMDEDGYITIEGRMKDMVIRGGENIYPREIEDFLYQHPDIQDVQVIGVPDEKYGEEL 481
Query: 458 GISIKLKENA-KLNADDIRTFCKGKVSKF 485
I L+ A +L A+DI FC+G+++ F
Sbjct: 482 MACIVLRPGAPELTAEDIAAFCQGRLAHF 510
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 78/167 (46%), Gaps = 38/167 (22%)
Query: 19 FQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
++++VD G GEL RG+ M GYW + +KT + D W+ TG
Sbjct: 369 LESRIVDTQTGETTERGVIGELHTRGYSVMQGYWNEPEKTALAVDQDGWMHTG------- 421
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
D + EDGY + GR+KDM+IRGGENIYP
Sbjct: 422 ------------------------------DLASMDEDGYITIEGRMKDMVIRGGENIYP 451
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
+EIE+F+ HP++ + GVPDE+ GEE+ I L+ A ED
Sbjct: 452 REIEDFLYQHPDIQDVQVIGVPDEKYGEELMACIVLRPGAPELTAED 498
>gi|291300395|ref|YP_003511673.1| AMP-dependent synthetase and ligase [Stackebrandtia nassauensis DSM
44728]
gi|290569615|gb|ADD42580.1| AMP-dependent synthetase and ligase [Stackebrandtia nassauensis DSM
44728]
Length = 502
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 82/172 (47%), Gaps = 37/172 (21%)
Query: 9 LQFSTLSSSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLR 68
L + +S + +V D + + P G GE+ I+G M GYW ++T E +G D W R
Sbjct: 315 LGHAGSASPRTEVEVRDTDGKPCPQGAVGEVFIKGPTVMKGYWNRPRETAEVLGEDGWFR 374
Query: 69 TGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMI 128
TG +G F + DGY ++V RIK++I
Sbjct: 375 TG---------------------------DLGQFDA----------DGYLRIVDRIKELI 397
Query: 129 IRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
IRGG N+YP E+EE + HP+V+EA GVPDE G+EV I + + L
Sbjct: 398 IRGGYNVYPSEVEEVLYAHPDVVEAAVVGVPDEHYGQEVAAMIVARPGSNLT 449
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY ++V RIK++IIRGG N+YP E+EE + HP+V+EA GVPDE G+EV I +
Sbjct: 384 DGYLRIVDRIKELIIRGGYNVYPSEVEEVLYAHPDVVEAAVVGVPDEHYGQEVAAMIVAR 443
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
+ L + + + ++S +
Sbjct: 444 PGSNLTEAQVSEWSRERLSAY 464
>gi|119503301|ref|ZP_01625385.1| long-chain-fatty-acid--CoA ligase [marine gamma proteobacterium
HTCC2080]
gi|119460947|gb|EAW42038.1| long-chain-fatty-acid--CoA ligase [marine gamma proteobacterium
HTCC2080]
Length = 567
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 81/164 (49%), Gaps = 38/164 (23%)
Query: 18 SFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ + K VD R + GE+ +RG + GY + T ETI + WL+TG
Sbjct: 392 TLEGKCVDSEGRKLGANEVGEVCVRGTPVIKGYINRPEATAETI-VEGWLQTG------- 443
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYP 137
IG+F EDG+ +V R KDMI+RGGENIY
Sbjct: 444 --------------------DIGYF----------DEDGFLYLVDRAKDMILRGGENIYG 473
Query: 138 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
E+E I HP VLE A+ VPD+R+GEEVG +I LKE A L+A
Sbjct: 474 AEVENAIFDHPAVLECVAFSVPDDRLGEEVGAAIHLKEAAMLDA 517
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 384 ITVPDSAGRSIFEK-----DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHP 438
I P++ +I E D EDG+ +V R KDMI+RGGENIY E+E I HP
Sbjct: 425 INRPEATAETIVEGWLQTGDIGYFDEDGFLYLVDRAKDMILRGGENIYGAEVENAIFDHP 484
Query: 439 NVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
VLE A+ VPD+R+GEEVG +I LKE A L+A +R +V+ F
Sbjct: 485 AVLECVAFSVPDDRLGEEVGAAIHLKEAAMLDASGLREHLASRVAAF 531
>gi|391326696|ref|XP_003737848.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Metaseiulus occidentalis]
Length = 544
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 76/156 (48%), Gaps = 38/156 (24%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD +IVPFG GEL RG+ Y KT+E + D W TG
Sbjct: 401 IELKIVDSKGKIVPFGEKGELCSRGYHIFKEYLHQPDKTEEVV-RDGWYYTG-------- 451
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D+ ++ DG+ + GR KDMIIRGGEN+YP
Sbjct: 452 -----------------------------DEAIMSPDGHVAITGRAKDMIIRGGENVYPA 482
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
EIE+F+ V EA+ +GVPD+R+GEEV + +K K
Sbjct: 483 EIEDFLLGLEEVEEAHVFGVPDQRLGEEVAVWVKTK 518
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 76/125 (60%), Gaps = 14/125 (11%)
Query: 369 ARIYH-YKKYLREEENITVPDSAGRSI-----FEKDQFVLREDGYGQVVGRIKDMIIRGG 422
+R YH +K+YL + PD + + D+ ++ DG+ + GR KDMIIRGG
Sbjct: 423 SRGYHIFKEYLHQ------PDKTEEVVRDGWYYTGDEAIMSPDGHVAITGRAKDMIIRGG 476
Query: 423 ENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKV 482
EN+YP EIE+F+ V EA+ +GVPD+R+GEEV + +K K ++ + ++ CKGKV
Sbjct: 477 ENVYPAEIEDFLLGLEEVEEAHVFGVPDQRLGEEVAVWVKTKPGIAVSEERLKAACKGKV 536
Query: 483 --SKF 485
SKF
Sbjct: 537 AISKF 541
>gi|45358129|ref|NP_987686.1| AMP-binding domain-containing protein [Methanococcus maripaludis
S2]
gi|44920886|emb|CAF30122.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II related
protein [Methanococcus maripaludis S2]
Length = 549
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 78/158 (49%), Gaps = 38/158 (24%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K++D + G GE+ RG+ M GY++ +KT E I D WL +G
Sbjct: 370 EVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLHSG-------- 421
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V EDGY ++VGRIKDMIIRGGENIYP+
Sbjct: 422 -----------------------------DLAVEDEDGYYKIVGRIKDMIIRGGENIYPR 452
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
EIEEF+ T P + +A G+PDE+ GE VG + KE
Sbjct: 453 EIEEFLYTMPGINDAQVVGIPDEKYGEIVGAFVIPKEG 490
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V EDGY ++VGRIKDMIIRGGENIYP+EIEEF+ T P + +A G+PDE+ GE V
Sbjct: 422 DLAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGEIV 481
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
G + KE ++ +D+R F K++++
Sbjct: 482 GAFVIPKEGYEIKEEDVRDFALEKIARY 509
>gi|17560308|ref|NP_506869.1| Protein ACS-2 [Caenorhabditis elegans]
gi|3876464|emb|CAB03012.1| Protein ACS-2 [Caenorhabditis elegans]
Length = 618
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 78/164 (47%), Gaps = 39/164 (23%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ +VD VP G GEL RG+ MLGYW D KT I DRW ++G
Sbjct: 428 ELAIVDEFGVPVPTGAKGELWSRGYSTMLGYWADHDKTNLAITRDRWYKSG--------- 478
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
D + EDG +VGR +DMI++GGEN+YP E
Sbjct: 479 ----------------------------DTATMNEDGTINIVGRTRDMIVKGGENVYPTE 510
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGEEVG--ISIKLKENAKLNA 181
IE+F+ V +A+ GVPD+R GE + + +++++ K+ A
Sbjct: 511 IEQFLHKLDYVADAHVVGVPDDRYGENICAWVRLRVEDEGKITA 554
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDG +VGR +DMI++GGEN+YP EIE+F+ V +A+ GVPD+R GE +
Sbjct: 479 DTATMNEDGTINIVGRTRDMIVKGGENVYPTEIEQFLHKLDYVADAHVVGVPDDRYGENI 538
Query: 458 G--ISIKLKENAKLNADDIRTFCKGKVSKF 485
+ +++++ K+ A+ I+ CK ++ +
Sbjct: 539 CAWVRLRVEDEGKITAEHIKKACKRGMAHY 568
>gi|340623898|ref|YP_004742351.1| AMP-binding domain-containing protein [Methanococcus maripaludis
X1]
gi|339904166|gb|AEK19608.1| AMP-binding domain protein [Methanococcus maripaludis X1]
Length = 549
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 78/158 (49%), Gaps = 38/158 (24%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K++D + G GE+ RG+ M GY++ +KT E I D WL +G
Sbjct: 370 EVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLHSG-------- 421
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V EDGY ++VGRIKDMIIRGGENIYP+
Sbjct: 422 -----------------------------DLAVEDEDGYYKIVGRIKDMIIRGGENIYPR 452
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
EIEEF+ T P + +A G+PDE+ GE VG + KE
Sbjct: 453 EIEEFLYTMPGINDAQVVGIPDEKYGEIVGAFVIPKEG 490
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V EDGY ++VGRIKDMIIRGGENIYP+EIEEF+ T P + +A G+PDE+ GE V
Sbjct: 422 DLAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGEIV 481
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
G + KE ++ +D+R F K++++
Sbjct: 482 GAFVIPKEGYEIKEEDVRDFALEKIARY 509
>gi|399077646|ref|ZP_10752496.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Caulobacter
sp. AP07]
gi|398035027|gb|EJL28280.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Caulobacter
sp. AP07]
Length = 530
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 77/172 (44%), Gaps = 37/172 (21%)
Query: 9 LQFSTLSSSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLR 68
++ + L + KV+ + +P G GE+ IR NM GYW+ + T ETI D WLR
Sbjct: 343 MRSAGLPMPGVELKVLGPDGESLPAGEVGEVAIRSPANMAGYWKLPEATAETIAEDGWLR 402
Query: 69 TGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMI 128
TG D L DGY + R+KDMI
Sbjct: 403 TG-------------------------------------DAGYLDADGYLFIHDRVKDMI 425
Query: 129 IRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
I GGENIYP E+E + HP+V E GVPD+ GE V + LK A ++
Sbjct: 426 ISGGENIYPAEVESAVYGHPHVAEVAVIGVPDDTWGEAVKAVVALKPGAPVD 477
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 386 VPDSAGRSIFEK------DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 439
+P++ +I E D L DGY + R+KDMII GGENIYP E+E + HP+
Sbjct: 387 LPEATAETIAEDGWLRTGDAGYLDADGYLFIHDRVKDMIISGGENIYPAEVESAVYGHPH 446
Query: 440 VLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
V E GVPD+ GE V + LK A ++ DI F + +++ F
Sbjct: 447 VAEVAVIGVPDDTWGEAVKAVVALKPGAPVDPADIIAFARTRIAAF 492
>gi|317152262|ref|YP_004120310.1| AMP-dependent synthetase and ligase [Desulfovibrio aespoeensis
Aspo-2]
gi|316942513|gb|ADU61564.1| AMP-dependent synthetase and ligase [Desulfovibrio aespoeensis
Aspo-2]
Length = 546
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 81/161 (50%), Gaps = 38/161 (23%)
Query: 20 QAKVVDHNN-RIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+ K+VD ++ R VP GT GE+ RG+ M+GY+ + + T+ I WL +G
Sbjct: 371 EIKIVDPDSGRRVPNGTQGEICCRGYSVMVGYYNNPKATEGAIDDRGWLHSG-------- 422
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ +DGY + GR+KDMIIRGGEN+YP+
Sbjct: 423 -----------------------------DLGVMDDDGYLSITGRLKDMIIRGGENVYPR 453
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKL 179
EIEEF+ + + GVP ++ GEEVG I LK+ A +
Sbjct: 454 EIEEFLYAMDGIRDVQVAGVPSQKFGEEVGTFIILKDGATM 494
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 60/88 (68%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ +DGY + GR+KDMIIRGGEN+YP+EIEEF+ + + GVP ++ GEEV
Sbjct: 423 DLGVMDDDGYLSITGRLKDMIIRGGENVYPREIEEFLYAMDGIRDVQVAGVPSQKFGEEV 482
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
G I LK+ A + +D+ +C+G ++++
Sbjct: 483 GTFIILKDGATMEPEDVIDYCRGNIARY 510
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,952,073,923
Number of Sequences: 23463169
Number of extensions: 350083420
Number of successful extensions: 1047418
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 26977
Number of HSP's successfully gapped in prelim test: 2372
Number of HSP's that attempted gapping in prelim test: 969662
Number of HSP's gapped (non-prelim): 79323
length of query: 485
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 338
effective length of database: 8,910,109,524
effective search space: 3011617019112
effective search space used: 3011617019112
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)