BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5016
(485 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0P4F7|ACSF2_DANRE Acyl-CoA synthetase family member 2, mitochondrial OS=Danio rerio
GN=acsf2 PE=2 SV=1
Length = 606
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 93/172 (54%), Gaps = 38/172 (22%)
Query: 16 SSSFQAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKK 74
S +AKVVD IVP G GEL+IRG+C ML YW+DE+KT+E I DRW +TG
Sbjct: 428 SPHTEAKVVDPTTGEIVPLGAQGELMIRGYCVMLEYWQDEEKTRECITKDRWYKTGDIAS 487
Query: 75 TSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGEN 134
DQF Y ++ GRIKD+IIRGGEN
Sbjct: 488 L--------------------------------DQF-----AYCKIEGRIKDLIIRGGEN 510
Query: 135 IYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
IYP EIE+F+ THP +LEA GV DERMGEEV I+LKE + E K+
Sbjct: 511 IYPAEIEQFLHTHPKILEAQVVGVKDERMGEEVCACIRLKEGQECTVEEIKA 562
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 5/92 (5%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
I DQF Y ++ GRIKD+IIRGGENIYP EIE+F+ THP +LEA GV DERM
Sbjct: 485 IASLDQF-----AYCKIEGRIKDLIIRGGENIYPAEIEQFLHTHPKILEAQVVGVKDERM 539
Query: 454 GEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
GEEV I+LKE + ++I+ +CKGK++ +
Sbjct: 540 GEEVCACIRLKEGQECTVEEIKAYCKGKIAHY 571
>sp|Q4R4Z9|ACSF2_MACFA Acyl-CoA synthetase family member 2, mitochondrial OS=Macaca
fascicularis GN=ACSF2 PE=2 SV=1
Length = 618
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 80/156 (51%), Gaps = 37/156 (23%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
TPGEL IRG+C MLGYW + QKT E + D+W RTG
Sbjct: 458 LNTPGELCIRGYCVMLGYWGEPQKTGEAVDQDKWYRTG---------------------- 495
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E
Sbjct: 496 ---------------DIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQE 540
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
GV D+RMGEE+ I+LK+ + A E K+
Sbjct: 541 VQVVGVKDDRMGEEICACIRLKDGEETTAEEMKAFC 576
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 496 DIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 555
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + A++++ FCKGK+S F
Sbjct: 556 CACIRLKDGEETTAEEMKAFCKGKISHF 583
>sp|Q5R9G9|ACSF2_PONAB Acyl-CoA synthetase family member 2, mitochondrial OS=Pongo abelii
GN=ACSF2 PE=2 SV=1
Length = 615
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 80/156 (51%), Gaps = 37/156 (23%)
Query: 33 FGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQ 92
TPGEL IRG+C MLGYW + QKT+E + D+W RTG
Sbjct: 455 LNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYRTG---------------------- 492
Query: 93 QQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLE 152
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E
Sbjct: 493 ---------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQE 537
Query: 153 AYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
GV D+RMGEE+ I+LK+ + E K+
Sbjct: 538 VQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 573
Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 493 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 553 CACIRLKDGEETTVEEIKAFCKGKISHF 580
>sp|Q17QJ1|ACSF2_BOVIN Acyl-CoA synthetase family member 2, mitochondrial OS=Bos taurus
GN=ACSF2 PE=2 SV=1
Length = 615
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 90/170 (52%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ + TPGEL IRG+C MLGYW + QKT+E IG D+W RTG
Sbjct: 441 EAQIVNTETGTLTELNTPGELCIRGYCVMLGYWGEPQKTEEAIGQDKWYRTG-------- 492
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D ++ E G+ ++VGR KDMIIRGGENIYP
Sbjct: 493 -----------------------------DIAMMDEQGFCKIVGRSKDMIIRGGENIYPA 523
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F THP V E GV D+RMGEE+ I+LKE K A E K+
Sbjct: 524 ELEDFFHTHPQVQEVQVVGVKDDRMGEEICACIRLKEGEKTTAEEIKAFC 573
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 63/88 (71%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 493 DIAMMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDDRMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LKE K A++I+ FCKGK+S F
Sbjct: 553 CACIRLKEGEKTTAEEIKAFCKGKISHF 580
>sp|Q8VCW8|ACSF2_MOUSE Acyl-CoA synthetase family member 2, mitochondrial OS=Mus musculus
GN=Acsf2 PE=2 SV=1
Length = 615
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 86/170 (50%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ + PGEL IRG+C M GYW + QKT ET+G D+W RTG
Sbjct: 441 EAQIVNVETGELTNLNVPGELYIRGYCVMQGYWGEPQKTFETVGQDKWYRTG-------- 492
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D ++ E G+ ++VGR KDMIIRGGENIYP
Sbjct: 493 -----------------------------DIALMDEQGFCKIVGRSKDMIIRGGENIYPA 523
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F HP V EA GV DERMGEE+ I+LK A E K+
Sbjct: 524 ELEDFFLKHPQVQEAQVVGVKDERMGEEICACIRLKSGETTTAEEIKAFC 573
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D ++ E G+ ++VGR KDMIIRGGENIYP E+E+F HP V EA GV DERMGEE+
Sbjct: 493 DIALMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFLKHPQVQEAQVVGVKDERMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK A++I+ FCKGK+S F
Sbjct: 553 CACIRLKSGETTTAEEIKAFCKGKISHF 580
>sp|Q499N5|ACSF2_RAT Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus
norvegicus GN=Acsf2 PE=2 SV=1
Length = 615
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 84/170 (49%), Gaps = 38/170 (22%)
Query: 20 QAKVVD-HNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
+A++V+ + PGEL IRG+C M GYW + QKT ET+G DRW RTG
Sbjct: 441 EAQIVNMETGELTKLNMPGELCIRGYCVMQGYWGEPQKTFETVGQDRWYRTG-------- 492
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D + E G+ ++VGR KDMIIRGGENIYP
Sbjct: 493 -----------------------------DIASMDEQGFCRIVGRSKDMIIRGGENIYPA 523
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E+F HP V EA GV D+RMGEE+ I+LK E K+
Sbjct: 524 ELEDFFHKHPQVQEAQVVGVKDDRMGEEICACIRLKSGETTTEEEIKAFC 573
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 57/82 (69%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
E G+ ++VGR KDMIIRGGENIYP E+E+F HP V EA GV D+RMGEE+ I+L
Sbjct: 499 EQGFCRIVGRSKDMIIRGGENIYPAELEDFFHKHPQVQEAQVVGVKDDRMGEEICACIRL 558
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
K ++I+ FCKGK+S F
Sbjct: 559 KSGETTTEEEIKAFCKGKISHF 580
>sp|Q96CM8|ACSF2_HUMAN Acyl-CoA synthetase family member 2, mitochondrial OS=Homo sapiens
GN=ACSF2 PE=1 SV=2
Length = 615
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 80/159 (50%), Gaps = 37/159 (23%)
Query: 30 IVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLK 89
+ TPGEL IRG+C MLGYW + QKT+E + D+W TG
Sbjct: 452 LAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTG------------------- 492
Query: 90 PLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 149
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP
Sbjct: 493 ------------------DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 534
Query: 150 VLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
V E GV D+RMGEE+ I+LK+ + E K+
Sbjct: 535 VQEVQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFC 573
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + E G+ ++VGR KDMIIRGGENIYP E+E+F THP V E GV D+RMGEE+
Sbjct: 493 DVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEI 552
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I+LK+ + ++I+ FCKGK+S F
Sbjct: 553 CACIRLKDGEETTVEEIKAFCKGKISHF 580
>sp|O31826|YNGI_BACSU Putative acyl-CoA synthetase YngI OS=Bacillus subtilis (strain 168)
GN=yngI PE=3 SV=1
Length = 549
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 66/91 (72%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
+F D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP VL+ GVPD +
Sbjct: 419 LFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYQHPAVLDVQVVGVPDAKF 478
Query: 454 GEEVGISIKLKENAKLNADDIRTFCKGKVSK 484
GEE IKLK+ ++ D+++ +CKGK+++
Sbjct: 479 GEEAAAWIKLKDGKSVSPDELKAYCKGKIAR 509
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 78/153 (50%), Gaps = 37/153 (24%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GEL RG+ M GY++D+ T++ I D WL TG
Sbjct: 386 GMQGELCTRGYHVMKGYYKDKDATRKAINHDGWLFTG----------------------- 422
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
D V+ EDGY ++ GR+KDM+IRGGENIYP+EIEEF+ HP VL+
Sbjct: 423 --------------DLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYQHPAVLDV 468
Query: 154 YAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
GVPD + GEE IKLK+ ++ E K+
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKSVSPDELKA 501
>sp|P69451|LCFA_ECOLI Long-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12)
GN=fadD PE=1 SV=1
Length = 561
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 83/179 (46%), Gaps = 42/179 (23%)
Query: 1 MWDMNPTDLQFST----LSSSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQK 56
+ +NP D+ + + L S +AK+VD ++ VP G PGEL ++G MLGYW+
Sbjct: 365 LVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVMLGYWQRPDA 424
Query: 57 TKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDG 116
T E I + WL TG D V+ E+G
Sbjct: 425 TDEIIK-NGWLHTG-------------------------------------DIAVMDEEG 446
Query: 117 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 175
+ ++V R KDMI+ G N+YP EIE+ + HP V E A GVP GE V I + K+
Sbjct: 447 FLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKD 505
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+G+ ++V R KDMI+ G N+YP EIE+ + HP V E A GVP GE V
Sbjct: 438 DIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAV 497
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I + +K++ L + + TFC+ +++ +
Sbjct: 498 KIFV-VKKDPSLTEESLVTFCRRQLTGY 524
>sp|P69452|LCFA_ECOL6 Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=fadD PE=3 SV=1
Length = 561
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 83/179 (46%), Gaps = 42/179 (23%)
Query: 1 MWDMNPTDLQFST----LSSSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQK 56
+ +NP D+ + + L S +AK+VD ++ VP G PGEL ++G MLGYW+
Sbjct: 365 LVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVMLGYWQRPDA 424
Query: 57 TKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDG 116
T E I + WL TG D V+ E+G
Sbjct: 425 TDEIIK-NGWLHTG-------------------------------------DIAVMDEEG 446
Query: 117 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 175
+ ++V R KDMI+ G N+YP EIE+ + HP V E A GVP GE V I + K+
Sbjct: 447 FLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKD 505
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+G+ ++V R KDMI+ G N+YP EIE+ + HP V E A GVP GE V
Sbjct: 438 DIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAV 497
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I + +K++ L + + TFC+ +++ +
Sbjct: 498 KIFV-VKKDPSLTEESLVTFCRRQLTGY 524
>sp|Q0K844|SAUT_CUPNH Probable sulfoacetate--CoA ligase OS=Cupriavidus necator (strain
ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauT PE=2
SV=1
Length = 509
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 37/164 (22%)
Query: 17 SSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTS 76
S +A+V+ + + P G GE++++G M GY++ T+E D WLRTG
Sbjct: 339 SGTRARVLGRDGKPAPDGQVGEIVLQGESVMAGYYKAPDITREAFTHDGWLRTG------ 392
Query: 77 FLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIY 136
+G+ + DGY + GR K++II+GGENI
Sbjct: 393 ---------------------DLGYRDA----------DGYFYISGRAKELIIKGGENIA 421
Query: 137 PKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
P+EI+E + HP VLEA A GVPD G+E+ + ++E A+ +
Sbjct: 422 PREIDEALLRHPGVLEAAAVGVPDPAYGQEIVAYVVMREAARCD 465
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY + GR K++II+GGENI P+EI+E + HP VLEA A GVPD G+E+ + ++
Sbjct: 400 DGYFYISGRAKELIIKGGENIAPREIDEALLRHPGVLEAAAVGVPDPAYGQEIVAYVVMR 459
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
E A+ + +R C ++ ++
Sbjct: 460 EAARCDDAALRAHCLRELGRY 480
>sp|Q8XDR6|LCFA_ECO57 Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O157:H7
GN=fadD PE=3 SV=1
Length = 561
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 82/179 (45%), Gaps = 42/179 (23%)
Query: 1 MWDMNPTDLQFST----LSSSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQK 56
+ +NP D+ + + L S +AK+VD ++ V G PGEL +RG MLGYW+
Sbjct: 365 LVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVSPGQPGELCVRGPQVMLGYWQRPDA 424
Query: 57 TKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDG 116
T E I + WL TG D V+ E+G
Sbjct: 425 TDEII-KNGWLHTG-------------------------------------DIAVMDEEG 446
Query: 117 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKE 175
+ ++V R KDMI+ G N+YP EIE+ + HP V E A GVP GE V I + K+
Sbjct: 447 FLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKD 505
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ E+G+ ++V R KDMI+ G N+YP EIE+ + HP V E A GVP GE V
Sbjct: 438 DIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAV 497
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I + +K++ L + + TFC+ +++ +
Sbjct: 498 KIFV-VKKDPSLTEESLVTFCRRQLTGY 524
>sp|Q9SMT7|4CLLA_ARATH 4-coumarate--CoA ligase-like 10 OS=Arabidopsis thaliana GN=4CLL10
PE=2 SV=1
Length = 514
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 55/81 (67%)
Query: 405 DGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 464
DGY +VGRIK++I RGGE I P E++ + THP+V + A+GVPDE+ GEE+ ++ +
Sbjct: 401 DGYLHLVGRIKELINRGGEKISPIEVDAVLLTHPDVSQGVAFGVPDEKYGEEINCAVIPR 460
Query: 465 ENAKLNADDIRTFCKGKVSKF 485
E + +DI+ FCK ++ F
Sbjct: 461 EGTTVTEEDIKAFCKKNLAAF 481
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 87 KLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQT 146
K P + + G+F++ D DGY +VGRIK++I RGGE I P E++ + T
Sbjct: 375 KNNPEANKAGFEFGWFHT--GDIGYFDTDGYLHLVGRIKELINRGGEKISPIEVDAVLLT 432
Query: 147 HPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKS 186
HP+V + A+GVPDE+ GEE+ ++ +E + + K+
Sbjct: 433 HPDVSQGVAFGVPDEKYGEEINCAVIPREGTTVTEEDIKA 472
>sp|P63521|LCFA_SALTY Long-chain-fatty-acid--CoA ligase OS=Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720) GN=fadD PE=3 SV=1
Length = 561
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 81/181 (44%), Gaps = 42/181 (23%)
Query: 1 MWDMNPTDLQFST----LSSSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQK 56
+ +NP D+ + + L S +AK+VD ++ V G GEL ++G MLGYW+
Sbjct: 365 LVSVNPHDIDYHSGSIGLPVPSTEAKLVDDDDNEVAPGEAGELCVKGPQVMLGYWQRPDA 424
Query: 57 TKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDG 116
T E I D WL TG D V+ EDG
Sbjct: 425 TDEII-KDGWLHTG-------------------------------------DIAVMDEDG 446
Query: 117 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
+ ++V R KDMI+ G N+YP EIE+ + H V E A GVP GE V + + K+
Sbjct: 447 FLRIVDRKKDMILVSGFNVYPNEIEDVVMQHSGVQEVAAVGVPSGSSGEAVKLFVVKKDP 506
Query: 177 A 177
A
Sbjct: 507 A 507
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDG+ ++V R KDMI+ G N+YP EIE+ + H V E A GVP GE V
Sbjct: 438 DIAVMDEDGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHSGVQEVAAVGVPSGSSGEAV 497
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ + +K++ L D + TFC+ ++ +
Sbjct: 498 KLFV-VKKDPALTDDALITFCRRHLTGY 524
>sp|P63522|LCFA_SALTI Long-chain-fatty-acid--CoA ligase OS=Salmonella typhi GN=fadD PE=3
SV=1
Length = 561
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 81/181 (44%), Gaps = 42/181 (23%)
Query: 1 MWDMNPTDLQFST----LSSSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQK 56
+ +NP D+ + + L S +AK+VD ++ V G GEL ++G MLGYW+
Sbjct: 365 LVSVNPHDIDYHSGSIGLPVPSTEAKLVDDDDNEVAPGEAGELCVKGPQVMLGYWQRPDA 424
Query: 57 TKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDG 116
T E I D WL TG D V+ EDG
Sbjct: 425 TDEII-KDGWLHTG-------------------------------------DIAVMDEDG 446
Query: 117 YGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKEN 176
+ ++V R KDMI+ G N+YP EIE+ + H V E A GVP GE V + + K+
Sbjct: 447 FLRIVDRKKDMILVSGFNVYPNEIEDVVMQHSGVQEVAAVGVPSGSSGEAVKLFVVKKDP 506
Query: 177 A 177
A
Sbjct: 507 A 507
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V+ EDG+ ++V R KDMI+ G N+YP EIE+ + H V E A GVP GE V
Sbjct: 438 DIAVMDEDGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHSGVQEVAAVGVPSGSSGEAV 497
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+ + +K++ L D + TFC+ ++ +
Sbjct: 498 KLFV-VKKDPALTDDALITFCRRHLTGY 524
>sp|Q8ZES9|LCFA_YERPE Long-chain-fatty-acid--CoA ligase OS=Yersinia pestis GN=fadD PE=3
SV=1
Length = 562
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 81/183 (44%), Gaps = 43/183 (23%)
Query: 5 NPTDLQFST----LSSSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKET 60
NP DL+ + L S ++ D + V G PGEL +RG MLGYW+ T +
Sbjct: 369 NPYDLKHYSGSIGLPVPSTDVRLRDDDGNDVELGKPGELWVRGPQVMLGYWQRPDATDDV 428
Query: 61 IGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQV 120
+ D WL TG D + EDG+ ++
Sbjct: 429 L-KDGWLATG-------------------------------------DIATMDEDGFLRI 450
Query: 121 VGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
V R KDMI+ G N+YP EIEE + H VLE+ GVP+E GE V + + +K +A L
Sbjct: 451 VDRKKDMILVSGFNVYPNEIEEVVALHAKVLESAVIGVPNEVSGEAVKVFV-VKNDASLT 509
Query: 181 AYE 183
E
Sbjct: 510 PEE 512
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDG+ ++V R KDMI+ G N+YP EIEE + H VLE+ GVP+E GE V
Sbjct: 438 DIATMDEDGFLRIVDRKKDMILVSGFNVYPNEIEEVVALHAKVLESAVIGVPNEVSGEAV 497
Query: 458 GISIKLKENAKLNADDIRTFCK 479
+ + +K +A L +++ T C+
Sbjct: 498 KVFV-VKNDASLTPEELLTHCR 518
>sp|O07610|LCFB_BACSU Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis (strain 168)
GN=lcfB PE=2 SV=2
Length = 513
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 69/146 (47%), Gaps = 38/146 (26%)
Query: 22 KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSA 81
KVVD R +P GEL+++G M GY++ +T+ + D WL TG
Sbjct: 348 KVVDPLGRELPAHQVGELIVKGPNVMKGYYKMPMETEHALK-DGWLYTGDLA-------- 398
Query: 82 MAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIE 141
RR EDGY +V R KDMII GG N+YP+E+E
Sbjct: 399 ---RRD--------------------------EDGYFYIVDRKKDMIIVGGYNVYPREVE 429
Query: 142 EFIQTHPNVLEAYAYGVPDERMGEEV 167
E + +HP+V EA GVPD + GE V
Sbjct: 430 EVLYSHPDVKEAVVIGVPDPQSGEAV 455
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
EDGY +V R KDMII GG N+YP+E+EE + +HP+V EA GVPD + GE V +
Sbjct: 402 EDGYFYIVDRKKDMIIVGGYNVYPREVEEVLYSHPDVKEAVVIGVPDPQSGEAVKGYVVP 461
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
K + + +DI C+ ++K+
Sbjct: 462 KRSG-VTEEDIMQHCEKHLAKY 482
>sp|O74976|FAT2_SCHPO Putative peroxisomal-coenzyme A synthetase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC1827.03c PE=1
SV=1
Length = 512
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 37/150 (24%)
Query: 22 KVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSA 81
K++D +P G GE+ +RG GY + K + DR+ RTG
Sbjct: 339 KILDQKGNEMPQGKEGEICVRGINVTKGYLNNPAANKSSFTKDRFFRTG----------- 387
Query: 82 MAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIE 141
D+ L +DGY + GRIK+++ RGGE I P EI+
Sbjct: 388 --------------------------DEGKLDKDGYVFITGRIKELVNRGGEKISPAEID 421
Query: 142 EFIQTHPNVLEAYAYGVPDERMGEEVGISI 171
+ HP+V EA + VPDE+ G+++ +I
Sbjct: 422 AVLMQHPDVSEAVCFAVPDEKYGQDIQAAI 451
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 389 SAGRSIFEKDQFV-------LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVL 441
+A +S F KD+F L +DGY + GRIK+++ RGGE I P EI+ + HP+V
Sbjct: 372 AANKSSFTKDRFFRTGDEGKLDKDGYVFITGRIKELVNRGGEKISPAEIDAVLMQHPDVS 431
Query: 442 EAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
EA + VPDE+ G+++ +I + + + + KV+ F
Sbjct: 432 EAVCFAVPDEKYGQDIQAAINPVAGKTVTPKQLHDYLEQKVAAF 475
>sp|P38137|FAT2_YEAST Peroxisomal-coenzyme A synthetase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PCS60 PE=1 SV=1
Length = 543
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 39/163 (23%)
Query: 23 VVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGP-DRWLRTGRYKKTSFLYSA 81
++D N+ ++P G GE+ IRG LGY + + KE + + RTG
Sbjct: 368 ILDDNDNVLPPGKVGEVSIRGENVTLGYANNPKANKENFTKRENYFRTG----------- 416
Query: 82 MAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIE 141
DQ +G+ + GRIK++I RGGE I P E++
Sbjct: 417 --------------------------DQGYFDPEGFLVLTGRIKELINRGGEKISPIELD 450
Query: 142 EFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYED 184
+ +HP + EA A+GVPD+ G+ V +I LK+ K+ YE+
Sbjct: 451 GIMLSHPKIDEAVAFGVPDDMYGQVVQAAIVLKKGEKM-TYEE 492
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
DQ +G+ + GRIK++I RGGE I P E++ + +HP + EA A+GVPD+ G+ V
Sbjct: 417 DQGYFDPEGFLVLTGRIKELINRGGEKISPIELDGIMLSHPKIDEAVAFGVPDDMYGQVV 476
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+I LK+ K+ +++ F K ++ F
Sbjct: 477 QAAIVLKKGEKMTYEELVNFLKKHLASF 504
>sp|A5JTM6|CBACL_PSEUC 4-chlorobenzoate--CoA ligase OS=Pseudomonas sp. (strain CBS-3) PE=1
SV=1
Length = 528
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 405 DGYGQVV--GRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIK 462
DG G +V GR+ DMII GGENI+P E+E + P V E GV DER G+ V +
Sbjct: 388 DGSGNIVVLGRVDDMIISGGENIHPSEVERILAAAPGVAEVVVIGVKDERWGQSVVACVV 447
Query: 463 LKENAKLNADDIRTFCKG 480
L+ A +A+ + FC+
Sbjct: 448 LQPGASASAERLDAFCRA 465
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 12/118 (10%)
Query: 85 RRKLKPLQQQ----QQQQIGFFYSLVSDQFVLREDGYGQVV--GRIKDMIIRGGENIYPK 138
RR+++P Q + Q F + +R DG G +V GR+ DMII GGENI+P
Sbjct: 355 RRRMRPFQATLTNLRLLQKSFRKAGTGRAICVR-DGSGNIVVLGRVDDMIISGGENIHPS 413
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENA-----KLNAYEDKSISSDY 191
E+E + P V E GV DER G+ V + L+ A +L+A+ S +D+
Sbjct: 414 EVERILAAAPGVAEVVVIGVKDERWGQSVVACVVLQPGASASAERLDAFCRASALADF 471
>sp|Q5KVX9|MENE_GEOKA 2-succinylbenzoate--CoA ligase OS=Geobacillus kaustophilus (strain
HTA426) GN=menE PE=3 SV=1
Length = 490
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 387 PDSAGRSI-----FEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVL 441
P++ ++I F D L EDG+ V+ R D+II GGEN+YP E+E + +HP+V
Sbjct: 351 PEATAQAIRGGWFFTGDIGYLDEDGFLYVLDRRSDLIISGGENVYPAEVEAVLLSHPDVE 410
Query: 442 EAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
EA GV +E G+ ++LK A + +R FC+ +++K+
Sbjct: 411 EAGVTGVENETWGQVPYAFVRLKRGASPDEAALRAFCRERLAKY 454
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 89 KPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHP 148
+P Q + G+F++ D L EDG+ V+ R D+II GGEN+YP E+E + +HP
Sbjct: 350 RPEATAQAIRGGWFFT--GDIGYLDEDGFLYVLDRRSDLIISGGENVYPAEVEAVLLSHP 407
Query: 149 NVLEAYAYGVPDERMGEEVGISIKLKENA 177
+V EA GV +E G+ ++LK A
Sbjct: 408 DVEEAGVTGVENETWGQVPYAFVRLKRGA 436
>sp|Q72YK9|MENE_BACC1 2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC
10987) GN=menE PE=3 SV=1
Length = 481
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 78/177 (44%), Gaps = 51/177 (28%)
Query: 2 WDMNPTDLQFSTLSSSSFQAKV-------------VDHNNRIVPFGTPGELLIRGHCNML 48
+ M T Q TLS+ KV ++ + +VP T GE++++G
Sbjct: 283 YGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPAFTEGEIVVKGPNVTG 342
Query: 49 GYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSD 108
GY+ E T+ETI + WL TG IG+
Sbjct: 343 GYFNREDATRETI-QNGWLHTG---------------------------DIGY------- 367
Query: 109 QFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGE 165
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G+
Sbjct: 368 ---LDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQ 421
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G +V ++
Sbjct: 368 LDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWG-QVPVAF 426
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
+K + ++ ++I FC+ K++K+
Sbjct: 427 VVK-SGEVTEEEIIHFCEAKLAKY 449
>sp|P96575|YDAB_BACSU Putative acyl--CoA ligase YdaB OS=Bacillus subtilis (strain 168)
GN=ydaB PE=3 SV=2
Length = 503
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D + EDG+ + GR KD+II GG+N+YP ++EE IQ P +LE G+PD GE+
Sbjct: 385 DSGYVDEDGFIFITGRYKDVIIYGGDNVYPDQVEEVIQQIPGILETAVVGIPDPLYGEKP 444
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
I ++ +D+ FCK ++S +
Sbjct: 445 KAFIVKNGGQRITEEDVIAFCKERLSAY 472
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 90 PLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPN 149
P + Q G+F + D + EDG+ + GR KD+II GG+N+YP ++EE IQ P
Sbjct: 369 PEATAKVLQNGWFRT--GDSGYVDEDGFIFITGRYKDVIIYGGDNVYPDQVEEVIQQIPG 426
Query: 150 VLEAYAYGVPDERMGEE 166
+LE G+PD GE+
Sbjct: 427 ILETAVVGIPDPLYGEK 443
>sp|B7HTW3|MENE_BACC7 2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH187)
GN=menE PE=3 SV=1
Length = 481
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 76/177 (42%), Gaps = 51/177 (28%)
Query: 2 WDMNPTDLQFSTLSSSSFQAKV-------------VDHNNRIVPFGTPGELLIRGHCNML 48
+ M T Q TLS+ KV ++ + +VP T GE++++G
Sbjct: 283 YGMTETSSQICTLSADYMLTKVGSAGKPLFQCRLRIEKDGVVVPAFTEGEIVVKGPNVTG 342
Query: 49 GYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSD 108
GY+ E T+ETI + WL TG D
Sbjct: 343 GYFNREDATRETI-QNGWLHTG-------------------------------------D 364
Query: 109 QFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGE 165
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G+
Sbjct: 365 LGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQ 421
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G +V +
Sbjct: 368 LDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWG-QVPAAF 426
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
+K + ++ ++I FC+ K++K+
Sbjct: 427 VVK-SGEVTEEEIIHFCEEKLAKY 449
>sp|B9J2F2|MENE_BACCQ 2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain Q1)
GN=menE PE=3 SV=1
Length = 481
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 76/177 (42%), Gaps = 51/177 (28%)
Query: 2 WDMNPTDLQFSTLSSSSFQAKV-------------VDHNNRIVPFGTPGELLIRGHCNML 48
+ M T Q TLS+ KV ++ + +VP T GE++++G
Sbjct: 283 YGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPAFTEGEIVVKGPNVTG 342
Query: 49 GYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSD 108
GY+ E T+ETI + WL TG D
Sbjct: 343 GYFNREDATRETI-QNGWLHTG-------------------------------------D 364
Query: 109 QFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGE 165
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G+
Sbjct: 365 LGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQ 421
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G +V +
Sbjct: 368 LDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWG-QVPAAF 426
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
+K + ++ ++I FC+ K++K+
Sbjct: 427 VVK-SGEVTEEEILHFCEEKLAKY 449
>sp|A7GU88|MENE_BACCN 2-succinylbenzoate--CoA ligase OS=Bacillus cereus subsp. cytotoxis
(strain NVH 391-98) GN=menE PE=3 SV=1
Length = 481
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 76/177 (42%), Gaps = 51/177 (28%)
Query: 2 WDMNPTDLQFSTLSSSSFQAKV-------------VDHNNRIVPFGTPGELLIRGHCNML 48
+ M T Q TLS+ KV ++ + +++P GE++++G
Sbjct: 283 YGMTETSSQICTLSADYMLTKVGSAGKPLFPCQLRIEKDGKVMPANVEGEIVVKGPNVTR 342
Query: 49 GYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSD 108
GY++ E T+ETI D WL TG D
Sbjct: 343 GYFKREDATRETI-VDGWLHTG-------------------------------------D 364
Query: 109 QFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGE 165
+ ++G+ V+ R D+II GGENIYP +IEE + +HP VLEA G DE G+
Sbjct: 365 LGYVDDEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPLVLEAGVVGKSDETWGQ 421
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
++G+ V+ R D+II GGENIYP +IEE + +HP VLEA G DE G +V ++ +
Sbjct: 370 DEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPLVLEAGVVGKSDETWG-QVPVAFVV 428
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
K ++ +++ FC+ K++K+
Sbjct: 429 KA-GQVTEEEMIHFCEEKLAKY 449
>sp|F4HUK6|AAE1_ARATH Probable acyl-activating enzyme 1, peroxisomal OS=Arabidopsis
thaliana GN=AAE1 PE=2 SV=1
Length = 556
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%)
Query: 398 DQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEV 457
D V DGY ++ R KD+II GGENI E+E + THP VLEA PDE GE
Sbjct: 427 DLGVKHPDGYIELKDRSKDIIISGGENISSIEVESTLFTHPCVLEAAVVARPDEYWGETA 486
Query: 458 GISIKLKENAKLNADDIRTFCKGKVSKF 485
+KLK+ +K +A+++ ++C+ ++ +
Sbjct: 487 CAFVKLKDGSKASAEELISYCRDRLPHY 514
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 69/156 (44%), Gaps = 38/156 (24%)
Query: 35 TPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQ 94
T GE++ RG+ M GY ++ + TKE
Sbjct: 392 TMGEVVFRGNTVMNGYLKNPEATKEAF--------------------------------- 418
Query: 95 QQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAY 154
+ G+F+S D V DGY ++ R KD+II GGENI E+E + THP VLEA
Sbjct: 419 ---KGGWFWS--GDLGVKHPDGYIELKDRSKDIIISGGENISSIEVESTLFTHPCVLEAA 473
Query: 155 AYGVPDERMGEEVGISIKLKENAKLNAYEDKSISSD 190
PDE GE +KLK+ +K +A E S D
Sbjct: 474 VVARPDEYWGETACAFVKLKDGSKASAEELISYCRD 509
>sp|P38135|FADK_ECOLI Short-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12)
GN=fadK PE=1 SV=3
Length = 548
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 37/160 (23%)
Query: 15 SSSSFQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKK 74
+++ + KVVD + +P G GE RG +GY+++ + T + + W +G
Sbjct: 361 AAAGVEIKVVDDARKTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYYSG---- 416
Query: 75 TSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGEN 134
D + E GY ++ GR KD+I+RGGEN
Sbjct: 417 ---------------------------------DLCRMDEAGYIKITGRKKDIIVRGGEN 443
Query: 135 IYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLK 174
I +E+E+ + HP + +A + DER+GE + LK
Sbjct: 444 ISSREVEDILLQHPKIHDACVVAMSDERLGERSCAYVVLK 483
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 395 FEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMG 454
+ D + E GY ++ GR KD+I+RGGENI +E+E+ + HP + +A + DER+G
Sbjct: 414 YSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMSDERLG 473
Query: 455 EEVGISIKLKE-NAKLNADDIRT-FCKGKVSKF 485
E + LK + L+ +++ F + +V+K+
Sbjct: 474 ERSCAYVVLKAPHHSLSLEEVVAFFSRKRVAKY 506
>sp|Q816I1|MENE_BACCR 2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC
14579 / DSM 31) GN=menE PE=3 SV=1
Length = 482
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 51/177 (28%)
Query: 2 WDMNPTDLQFSTLSSSSFQAKV-------------VDHNNRIVPFGTPGELLIRGHCNML 48
+ M T Q TLS+ KV ++ + +VP GE++++G
Sbjct: 284 YGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPPLVEGEIVVKGPNVTG 343
Query: 49 GYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSD 108
GY+ E T+ETI + WL TG D
Sbjct: 344 GYFNREDATRETI-QNGWLHTG-------------------------------------D 365
Query: 109 QFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGE 165
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G+
Sbjct: 366 LGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMSDDKWGQ 422
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G +V +
Sbjct: 369 LDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMSDDKWG-QVPAAF 427
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
+K A + ++I FC+ K++K+
Sbjct: 428 VVKSGA-VTEEEILHFCEEKLAKY 450
>sp|B7JDD6|MENE_BACC0 2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH820)
GN=menE PE=3 SV=1
Length = 482
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 51/177 (28%)
Query: 2 WDMNPTDLQFSTLSSSSFQAKV-------------VDHNNRIVPFGTPGELLIRGHCNML 48
+ M T Q TLS+ KV ++ + +VP GE++++G
Sbjct: 284 YGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTG 343
Query: 49 GYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSD 108
GY+ E T+ETI + WL TG D
Sbjct: 344 GYFNREDATRETI-QNGWLHTG-------------------------------------D 365
Query: 109 QFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGE 165
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G+
Sbjct: 366 LGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQ 422
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G +V +
Sbjct: 369 LDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWG-QVPAAF 427
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
+K + ++ ++I FC+ K++K+
Sbjct: 428 VVK-SGEITEEEILHFCEEKLAKY 450
>sp|Q6HC29|MENE_BACHK 2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=menE PE=3 SV=1
Length = 482
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 51/177 (28%)
Query: 2 WDMNPTDLQFSTLSSSSFQAKV-------------VDHNNRIVPFGTPGELLIRGHCNML 48
+ M T Q TLS+ KV ++ + +VP GE++++G
Sbjct: 284 YGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTG 343
Query: 49 GYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSD 108
GY+ E T+ETI + WL TG D
Sbjct: 344 GYFNREDATRETI-QNGWLHTG-------------------------------------D 365
Query: 109 QFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGE 165
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G+
Sbjct: 366 LGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQ 422
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G +V +
Sbjct: 369 LDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWG-QVPAAF 427
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
+K + ++ ++I FC+ K++K+
Sbjct: 428 VVK-SGEVTEEEILHFCEEKLAKY 450
>sp|A0RK73|MENE_BACAH 2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis (strain Al
Hakam) GN=menE PE=3 SV=1
Length = 482
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 51/177 (28%)
Query: 2 WDMNPTDLQFSTLSSSSFQAKV-------------VDHNNRIVPFGTPGELLIRGHCNML 48
+ M T Q TLS+ KV ++ + +VP GE++++G
Sbjct: 284 YGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPPFVEGEIVVKGPNVTG 343
Query: 49 GYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSD 108
GY+ E T+ETI + WL TG D
Sbjct: 344 GYFNREDATRETI-QNGWLHTG-------------------------------------D 365
Query: 109 QFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGE 165
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G+
Sbjct: 366 LGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQ 422
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G +V +
Sbjct: 369 LDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWG-QVPAAF 427
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
+K + ++ ++I FC+ K++K+
Sbjct: 428 VVK-SGEITEEEILHFCEEKLAKY 450
>sp|Q81K97|MENE_BACAN 2-succinylbenzoate--CoA ligase OS=Bacillus anthracis GN=menE PE=3
SV=1
Length = 481
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 51/177 (28%)
Query: 2 WDMNPTDLQFSTLSSSSFQAKV-------------VDHNNRIVPFGTPGELLIRGHCNML 48
+ M T Q TLS+ KV ++ + +VP GE++++G
Sbjct: 283 YGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTG 342
Query: 49 GYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSD 108
GY+ E T+ETI + WL TG D
Sbjct: 343 GYFNREDATRETI-QNGWLHTG-------------------------------------D 364
Query: 109 QFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGE 165
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G+
Sbjct: 365 LGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQ 421
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G +V +
Sbjct: 368 LDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWG-QVPAAF 426
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
+K + ++ ++I FC+ K++K+
Sbjct: 427 VVK-SGEITEEEILHFCEEKLAKY 449
>sp|C3LB87|MENE_BACAC 2-succinylbenzoate--CoA ligase OS=Bacillus anthracis (strain CDC
684 / NRRL 3495) GN=menE PE=3 SV=1
Length = 482
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 51/177 (28%)
Query: 2 WDMNPTDLQFSTLSSSSFQAKV-------------VDHNNRIVPFGTPGELLIRGHCNML 48
+ M T Q TLS+ KV ++ + +VP GE++++G
Sbjct: 284 YGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTG 343
Query: 49 GYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSD 108
GY+ E T+ETI + WL TG D
Sbjct: 344 GYFNREDATRETI-QNGWLHTG-------------------------------------D 365
Query: 109 QFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGE 165
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G+
Sbjct: 366 LGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQ 422
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G +V +
Sbjct: 369 LDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWG-QVPAAF 427
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
+K + ++ ++I FC+ K++K+
Sbjct: 428 VVK-SGEITEEEILHFCEEKLAKY 450
>sp|C3PCK3|MENE_BACAA 2-succinylbenzoate--CoA ligase OS=Bacillus anthracis (strain A0248)
GN=menE PE=3 SV=1
Length = 482
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 51/177 (28%)
Query: 2 WDMNPTDLQFSTLSSSSFQAKV-------------VDHNNRIVPFGTPGELLIRGHCNML 48
+ M T Q TLS+ KV ++ + +VP GE++++G
Sbjct: 284 YGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTG 343
Query: 49 GYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSD 108
GY+ E T+ETI + WL TG D
Sbjct: 344 GYFNREDATRETI-QNGWLHTG-------------------------------------D 365
Query: 109 QFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGE 165
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G+
Sbjct: 366 LGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQ 422
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G +V +
Sbjct: 369 LDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWG-QVPAAF 427
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
+K + ++ ++I FC+ K++K+
Sbjct: 428 VVK-SGEITEEEILHFCEEKLAKY 450
>sp|P94547|LCFA_BACSU Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis (strain 168)
GN=lcfA PE=3 SV=1
Length = 560
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%)
Query: 394 IFEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERM 453
+F D + E+G+ + R KD+II GG NIYP+E+EE + H + E GVPD
Sbjct: 433 LFTGDMGYMDEEGFFYIADRKKDIIIAGGYNIYPREVEEALYEHEAIQEIVVAGVPDSYR 492
Query: 454 GEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
GE V + LK+ AK + +++ F + +++ +
Sbjct: 493 GETVKAFVVLKKGAKADTEELDAFARSRLAPY 524
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 63/147 (42%), Gaps = 38/147 (25%)
Query: 37 GELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQ 96
GE++++G M GYW ++T + D WL TG
Sbjct: 404 GEIIVKGPQVMKGYWNKPEETAAVLR-DGWLFTG-------------------------- 436
Query: 97 QQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAY 156
D + E+G+ + R KD+II GG NIYP+E+EE + H + E
Sbjct: 437 -----------DMGYMDEEGFFYIADRKKDIIIAGGYNIYPREVEEALYEHEAIQEIVVA 485
Query: 157 GVPDERMGEEVGISIKLKENAKLNAYE 183
GVPD GE V + LK+ AK + E
Sbjct: 486 GVPDSYRGETVKAFVVLKKGAKADTEE 512
>sp|Q632I5|MENE_BACCZ 2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ZK /
E33L) GN=menE PE=3 SV=1
Length = 482
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 51/177 (28%)
Query: 2 WDMNPTDLQFSTLSSSSFQAKV-------------VDHNNRIVPFGTPGELLIRGHCNML 48
+ M T Q TLS+ KV ++ + +VP GE++++G
Sbjct: 284 YGMTETSSQICTLSADYMLMKVGSAGKPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTG 343
Query: 49 GYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSD 108
GY+ E T+ETI + WL TG D
Sbjct: 344 GYFNREDATRETI-QNGWLHTG-------------------------------------D 365
Query: 109 QFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGE 165
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G+
Sbjct: 366 LGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQ 422
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
L E+G+ V+ R D+II GGENIYP +IEE + +HP V EA G+ D++ G +V +
Sbjct: 369 LDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWG-QVPAAF 427
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
+K + ++ ++I FC+ K++K+
Sbjct: 428 VVK-SGEITEEEILHFCEEKLAKY 450
>sp|C5D6U5|MENE_GEOSW 2-succinylbenzoate--CoA ligase OS=Geobacillus sp. (strain WCH70)
GN=menE PE=3 SV=1
Length = 492
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 387 PDSAGRSI-----FEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVL 441
PD+ ++I + D + EDG+ V+ R D+II GGEN+YP EIE + +H V
Sbjct: 352 PDATAKAIRGGWFYTGDIGYIDEDGFLYVLDRRSDLIISGGENVYPAEIEAVLLSHEAVE 411
Query: 442 EAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKGKVSKF 485
EA G+ DE G+ +K K + + ++ FC+ ++K+
Sbjct: 412 EAGVTGIDDETWGQVPCAFVKRKRGYSVTVEQLKQFCQAHLAKY 455
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 100 GFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 159
G+FY+ D + EDG+ V+ R D+II GGEN+YP EIE + +H V EA G+
Sbjct: 362 GWFYT--GDIGYIDEDGFLYVLDRRSDLIISGGENVYPAEIEAVLLSHEAVEEAGVTGID 419
Query: 160 DERMGE 165
DE G+
Sbjct: 420 DETWGQ 425
>sp|A9VM74|MENE_BACWK 2-succinylbenzoate--CoA ligase OS=Bacillus weihenstephanensis
(strain KBAB4) GN=menE PE=3 SV=1
Length = 481
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 73/177 (41%), Gaps = 51/177 (28%)
Query: 2 WDMNPTDLQFSTLSSSSFQAKV-------------VDHNNRIVPFGTPGELLIRGHCNML 48
+ M T Q TL++ KV ++ + +VP GE++++G
Sbjct: 283 YGMTETSSQICTLTADYMLTKVGSAGKPLFQCQLRIEKDGVVVPPRAEGEIVVKGPNVTG 342
Query: 49 GYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSD 108
GY+ E T E I + WL TG D
Sbjct: 343 GYFNREDATHEAI-RNGWLHTG-------------------------------------D 364
Query: 109 QFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGE 165
L E+G+ V+ R D+II GGENIYP +IEE + +HP V+EA G+ DE G+
Sbjct: 365 LGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVVEAGVVGMADESWGQ 421
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
L E+G+ V+ R D+II GGENIYP +IEE + +HP V+EA G+ DE G +V +
Sbjct: 368 LDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVVEAGVVGMADESWG-QVPAAF 426
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
+K + + ++I FC+ K++K+
Sbjct: 427 VVK-SGDVTEEEIIRFCEEKLAKY 449
>sp|P80436|TRS1_STRTI Triostin synthetase I OS=Streptomyces triostinicus GN=trsA PE=1
SV=2
Length = 527
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 37/146 (25%)
Query: 20 QAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLY 79
+ ++VD + VP G GE++ RG + GY+ ++ + PD + RTG + S
Sbjct: 355 EVRIVDESLNPVPEGEAGEMIARGPYTIRGYYRAPEENTRSFTPDGFFRTGDLVRRS--- 411
Query: 80 SAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKE 139
+G +VGRIKD+I R GE + +E
Sbjct: 412 ----------------------------------PEGDITIVGRIKDVINRAGEKVSAEE 437
Query: 140 IEEFIQTHPNVLEAYAYGVPDERMGE 165
+E ++THP+V +A GVPD +GE
Sbjct: 438 VERQLRTHPSVQDAAVVGVPDTVLGE 463
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 372 YHYKKYLREEENIT---VPDSAGRSIFEKDQFVLRE-DGYGQVVGRIKDMIIRGGENIYP 427
Y + Y R E T PD F V R +G +VGRIKD+I R GE +
Sbjct: 380 YTIRGYYRAPEENTRSFTPDG----FFRTGDLVRRSPEGDITIVGRIKDVINRAGEKVSA 435
Query: 428 KEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNADDIRTFCKG 480
+E+E ++THP+V +A GVPD +GE + L A++ ++ F +G
Sbjct: 436 EEVERQLRTHPSVQDAAVVGVPDTVLGERTYAFLVLT-GAQIRTSAVKEFLRG 487
>sp|Q10878|FAD10_MYCTU Putative fatty-acid--CoA ligase FadD10 OS=Mycobacterium
tuberculosis GN=fadD10 PE=2 SV=1
Length = 540
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 59/140 (42%), Gaps = 38/140 (27%)
Query: 32 PFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPL 91
P + G L I+ NMLGYW + ++T E + D W+ TG
Sbjct: 370 PSASFGTLWIKSPANMLGYWNNPERTAEVL-IDGWVNTG--------------------- 407
Query: 92 QQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVL 151
D REDG+ + GR +MII GG NI P E++ + V
Sbjct: 408 ----------------DLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVR 451
Query: 152 EAYAYGVPDERMGEEVGISI 171
EA Y +PDE G VG+++
Sbjct: 452 EAACYEIPDEEFGALVGLAV 471
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 403 REDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
REDG+ + GR +MII GG NI P E++ + V EA Y +PDE G VG+++
Sbjct: 413 REDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACYEIPDEEFGALVGLAV 471
>sp|Q9LPK6|AEE9_ARATH Probable acyl-activating enzyme 9 OS=Arabidopsis thaliana GN=AEE9
PE=2 SV=1
Length = 550
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 395 FEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMG 454
+ D V+ EDGY +V R KD+II GGENI E+E + T+P V EA PD+ G
Sbjct: 423 YSGDVGVIHEDGYLEVKDRSKDVIICGGENISSAEVETVLYTNPVVKEAAVVAKPDKMWG 482
Query: 455 EEVGISIKLK----ENAKLNADDIRTFCKGKVSKF 485
E + LK N + +IR FCK ++ K+
Sbjct: 483 ETPCAFVSLKYDSNGNGLVTEREIREFCKTRLPKY 517
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 69/161 (42%), Gaps = 42/161 (26%)
Query: 21 AKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYS 80
K V+H+ V GE++++G MLGY++D + T + D W
Sbjct: 381 GKSVEHDGVSV-----GEIVLKGGSVMLGYYKDPEGTAACMREDGW-------------- 421
Query: 81 AMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEI 140
FYS D V+ EDGY +V R KD+II GGENI E+
Sbjct: 422 ---------------------FYS--GDVGVIHEDGYLEVKDRSKDVIICGGENISSAEV 458
Query: 141 EEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNA 181
E + T+P V EA PD+ GE + LK ++ N
Sbjct: 459 ETVLYTNPVVKEAAVVAKPDKMWGETPCAFVSLKYDSNGNG 499
>sp|Q7XXL2|4CLL9_ORYSJ 4-coumarate--CoA ligase-like 9 OS=Oryza sativa subsp. japonica
GN=4CLL9 PE=2 SV=2
Length = 555
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 42/150 (28%)
Query: 19 FQAKVVDHN-NRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSF 77
+ K VD + R +P TPGEL +R M GY++ +++T+ T+ WL TG
Sbjct: 378 LEVKFVDPDTGRSLPANTPGELCVRSQSVMQGYYKRKEETERTVDGKGWLHTG------- 430
Query: 78 LYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQV--VGRIKDMIIRGGENI 135
+G+ DG G V V RIK++I G +
Sbjct: 431 --------------------DVGYI------------DGDGDVFIVDRIKELIKYKGFQV 458
Query: 136 YPKEIEEFIQTHPNVLEAYAYGVPDERMGE 165
P E+E + +HP+V +A +GVPDE GE
Sbjct: 459 APAELEAVLLSHPSVEDAAVFGVPDEEAGE 488
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 4/142 (2%)
Query: 344 KWMNPKFSTTTRKVALTWPNSMDSEARIYHYKKYLREEENITVPDSAGRSIFEKDQFVLR 403
K+++P T R + P + ++ Y R+EE D G + D +
Sbjct: 381 KFVDPD---TGRSLPANTPGELCVRSQSVMQGYYKRKEETERTVDGKGW-LHTGDVGYID 436
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
DG +V RIK++I G + P E+E + +HP+V +A +GVPDE GE +
Sbjct: 437 GDGDVFIVDRIKELIKYKGFQVAPAELEAVLLSHPSVEDAAVFGVPDEEAGEVPVACVVR 496
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
+ A+ ++I + +V+ +
Sbjct: 497 RHGAEEGEEEIVAYVAERVASY 518
>sp|Q65FT5|MENE_BACLD 2-succinylbenzoate--CoA ligase OS=Bacillus licheniformis (strain
DSM 13 / ATCC 14580) GN=menE PE=3 SV=1
Length = 478
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 38/132 (28%)
Query: 34 GTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQ 93
G GE+ ++G M GY ++E K++ D W +TG
Sbjct: 332 GEHGEITVKGPTVMKGYLKNEAANKDSFN-DGWFKTG----------------------- 367
Query: 94 QQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEA 153
IG+F +DG+ V+ R D+II GGENIYP E+E + +HPNV EA
Sbjct: 368 ----DIGYF----------DDDGFLYVLDRRSDLIISGGENIYPAEVEAVLLSHPNVAEA 413
Query: 154 YAYGVPDERMGE 165
GV D+ G+
Sbjct: 414 GVKGVDDKTWGK 425
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
+DG+ V+ R D+II GGENIYP E+E + +HPNV EA GV D+ G+ L
Sbjct: 374 DDGFLYVLDRRSDLIISGGENIYPAEVEAVLLSHPNVAEAGVKGVDDKTWGKVP--HAYL 431
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
++ ++ +++ FCK +++ +
Sbjct: 432 VADSPVDEEELSEFCKERLASY 453
>sp|Q9LPK7|AEE10_ARATH Probable acyl-activating enzyme 10 OS=Arabidopsis thaliana GN=AEE10
PE=2 SV=1
Length = 549
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 59/138 (42%), Gaps = 37/138 (26%)
Query: 37 GELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFLYSAMAIRRKLKPLQQQQQ 96
GE++ RG MLGY++D Q T + D W
Sbjct: 389 GEIVFRGSSVMLGYYKDPQGTAACMREDGW------------------------------ 418
Query: 97 QQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAY 156
FYS D V+ +DGY ++ R KD+II GGENI EIE + T+P V EA
Sbjct: 419 -----FYS--GDIGVIHKDGYLEIKDRSKDVIICGGENISSAEIETVLYTNPVVKEAAVV 471
Query: 157 GVPDERMGEEVGISIKLK 174
PD+ GE + LK
Sbjct: 472 AKPDKMWGETPCAFVSLK 489
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 395 FEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMG 454
+ D V+ +DGY ++ R KD+II GGENI EIE + T+P V EA PD+ G
Sbjct: 420 YSGDIGVIHKDGYLEIKDRSKDVIICGGENISSAEIETVLYTNPVVKEAAVVAKPDKMWG 479
Query: 455 EE--VGISIKLKENA----KLNADDIRTFCKGKVSKF 485
E +S+K N + +IR FCK K+ K+
Sbjct: 480 ETPCAFVSLKCDNNGDGSVPVTEREIREFCKTKLPKY 516
>sp|O80658|AAE4_ARATH Probable acyl-activating enzyme 4 OS=Arabidopsis thaliana GN=AEE4
PE=2 SV=1
Length = 545
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 68/170 (40%), Gaps = 49/170 (28%)
Query: 19 FQAKVVDHNNRIVPFGTPGELLIRGHCNMLGYWEDEQKTKETIGPDRWLRTGRYKKTSFL 78
K V H+ V GE++ RG MLGY++D + T ++ D W TG
Sbjct: 377 ISGKSVKHDGATV-----GEIVFRGGSVMLGYYKDPEGTAASMREDGWFYTG-------- 423
Query: 79 YSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPK 138
D V+ DGY +V R KD++I GGENI
Sbjct: 424 -----------------------------DIGVMHPDGYLEVKDRSKDVVICGGENISST 454
Query: 139 EIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLNAYEDKSIS 188
E+E + T+P + EA PD+ GE + LK Y D S++
Sbjct: 455 ELEAVLYTNPAIKEAAVVAKPDKMWGETPCAFVSLK-------YHDGSVT 497
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 395 FEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMG 454
+ D V+ DGY +V R KD++I GGENI E+E + T+P + EA PD+ G
Sbjct: 421 YTGDIGVMHPDGYLEVKDRSKDVVICGGENISSTELEAVLYTNPAIKEAAVVAKPDKMWG 480
Query: 455 EEVGISIKLK-ENAKLNADDIRTFCKGKVSKF 485
E + LK + + +IR FCK K+ K+
Sbjct: 481 ETPCAFVSLKYHDGSVTEREIREFCKTKLPKY 512
>sp|Q9SFW5|AEE21_ARATH Probable acyl-activating enzyme 21 OS=Arabidopsis thaliana GN=AEE21
PE=3 SV=1
Length = 546
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%)
Query: 395 FEKDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMG 454
+ +D V+ DGY Q R +D+I GGE + KEIE + +HP V +A G PDE +G
Sbjct: 413 WSRDMGVIDPDGYIQFKDRSQDVITCGGEIVGSKEIEGILYSHPAVYDAGVVGRPDETLG 472
Query: 455 EEVGISIKLKENAKLNADDIRTFCKGKV 482
E + +KLKE A+ ++I FCK K+
Sbjct: 473 ESMCAFVKLKEGAEAREEEIIEFCKRKL 500
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 100 GFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVP 159
G+++S D V+ DGY Q R +D+I GGE + KEIE + +HP V +A G P
Sbjct: 410 GWYWS--RDMGVIDPDGYIQFKDRSQDVITCGGEIVGSKEIEGILYSHPAVYDAGVVGRP 467
Query: 160 DERMGEEVGISIKLKEN 176
DE +GE + +KLKE
Sbjct: 468 DETLGESMCAFVKLKEG 484
>sp|O53306|FAC13_MYCTU Long-chain-fatty-acid--CoA ligase FadD13 OS=Mycobacterium
tuberculosis GN=fadD13 PE=1 SV=1
Length = 503
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 402 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 461
+ ++GY + R+KDMII GGEN+YP EIE I P V E G+PDE+ G E+ +I
Sbjct: 386 IDDEGYLYIKDRLKDMIISGGENVYPAEIESVIIGVPGVSEVAVIGLPDEKWG-EIAAAI 444
Query: 462 KLKENAKLNADDIRTFCKGKVSKF 485
+ + +++ I +C +++++
Sbjct: 445 VVADQNEVSEQQIVEYCGTRLARY 468
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%)
Query: 112 LREDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISI 171
+ ++GY + R+KDMII GGEN+YP EIE I P V E G+PDE+ GE +
Sbjct: 386 IDDEGYLYIKDRLKDMIISGGENVYPAEIESVIIGVPGVSEVAVIGLPDEKWGEIAAAIV 445
Query: 172 KLKEN 176
+N
Sbjct: 446 VADQN 450
>sp|B4EY25|CAIC_PROMH Probable crotonobetaine/carnitine-CoA ligase OS=Proteus mirabilis
(strain HI4320) GN=caiC PE=3 SV=1
Length = 518
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 67/166 (40%), Gaps = 40/166 (24%)
Query: 18 SFQAKVVDHNNRIVPFGTPGELLIRGHCN---MLGYWEDEQKTKETIGPDRWLRTGRYKK 74
+QA++ D N+ VP G GE+ ++G Y+ T++ + PD WL TG Y
Sbjct: 349 CYQAQIRDKQNQQVPNGVVGEICVKGEPGKTLFKEYYNRPDATEKALEPDGWLHTGDYG- 407
Query: 75 TSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGEN 134
Q GFFY V R +MI RGGEN
Sbjct: 408 --------------------YQDDEGFFY----------------FVDRSCNMIKRGGEN 431
Query: 135 IYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
+ EIE I +HP + + GVPD+ E + + L + L+
Sbjct: 432 VSCIEIENIIASHPKIQDVAVIGVPDDIRDEAIKAFVVLVDGETLS 477
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
++G+ V R +MI RGGEN+ EIE I +HP + + GVPD+ E + + L
Sbjct: 411 DEGFFYFVDRSCNMIKRGGENVSCIEIENIIASHPKIQDVAVIGVPDDIRDEAIKAFVVL 470
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
+ L+ + FC+ ++KF
Sbjct: 471 VDGETLSEEAFFAFCEQNMAKF 492
>sp|Q8GB18|CAIC_PROSL Probable crotonobetaine/carnitine-CoA ligase OS=Proteus sp. (strain
LE138) GN=caiC PE=3 SV=1
Length = 518
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 67/166 (40%), Gaps = 40/166 (24%)
Query: 18 SFQAKVVDHNNRIVPFGTPGELLIRGHCN---MLGYWEDEQKTKETIGPDRWLRTGRYKK 74
+QA++ D N+ VP G GE+ ++G Y+ T++ + PD WL TG Y
Sbjct: 349 CYQAQIRDKQNQQVPNGVVGEICVKGEAGKTLFKEYYNRPDATEKALEPDGWLHTGDYG- 407
Query: 75 TSFLYSAMAIRRKLKPLQQQQQQQIGFFYSLVSDQFVLREDGYGQVVGRIKDMIIRGGEN 134
+ GFFY V R +MI RGGEN
Sbjct: 408 --------------------YRDDEGFFY----------------FVDRSCNMIKRGGEN 431
Query: 135 IYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKLKENAKLN 180
+ EIE I +HP + + GVPD+ E + + L + L+
Sbjct: 432 VSCIEIENIIASHPKIQDVAVIGVPDDIRDEAIKAFVVLVDGETLS 477
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 404 EDGYGQVVGRIKDMIIRGGENIYPKEIEEFIQTHPNVLEAYAYGVPDERMGEEVGISIKL 463
++G+ V R +MI RGGEN+ EIE I +HP + + GVPD+ E + + L
Sbjct: 411 DEGFFYFVDRSCNMIKRGGENVSCIEIENIIASHPKIQDVAVIGVPDDIRDEAIKAFVVL 470
Query: 464 KENAKLNADDIRTFCKGKVSKF 485
+ L+ + FC+ ++KF
Sbjct: 471 VDGETLSEEAFFAFCEQNMAKF 492
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 189,835,781
Number of Sequences: 539616
Number of extensions: 8445203
Number of successful extensions: 25564
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 24136
Number of HSP's gapped (non-prelim): 1449
length of query: 485
length of database: 191,569,459
effective HSP length: 121
effective length of query: 364
effective length of database: 126,275,923
effective search space: 45964435972
effective search space used: 45964435972
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)