BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5022
(359 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O17583|LIN10_CAEEL Protein lin-10 OS=Caenorhabditis elegans GN=lin-10 PE=1 SV=1
Length = 982
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/366 (57%), Positives = 255/366 (69%), Gaps = 44/366 (12%)
Query: 28 GTLFRLKFLGSVQVDEDDPKCCKRRVKKV----MVEEA-----APEGETQPSTEVDLFIS 78
G LFR ++LGS Q+ C+ R K +EA APEG+ QPSTE+DLFIS
Sbjct: 604 GVLFRARYLGSTQM------LCESRGSKAARMAQAQEAVARVKAPEGDVQPSTEIDLFIS 657
Query: 79 TEKIMVLNTDLK---------EIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPK 129
TEKIMVLNTDL+ +I+MDHALRTISYIADIGDLVVLMARR S +DE
Sbjct: 658 TEKIMVLNTDLQRISDTDVRQDILMDHALRTISYIADIGDLVVLMARRMSTSH-SDESCS 716
Query: 130 --------ISRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGIEDHSFVKEMDY 181
+ +TPK+ICHVFESDEA FIAQSIGQAFQVAY+EFL+ANGI+D S+++++DY
Sbjct: 717 DGDSSGGGVRKTPKVICHVFESDEASFIAQSIGQAFQVAYVEFLRANGIDDPSYLRQIDY 776
Query: 182 QEVLNSQEIFGDELQMFAKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPA 241
QEVLNSQE+ GDEL+MFAKKE QKEVVVPK GE LG+V+VESGWGSMLPTVV+A++ P
Sbjct: 777 QEVLNSQELLGDELEMFAKKETQKEVVVPKKAGEPLGIVVVESGWGSMLPTVVLAHMNPV 836
Query: 242 GAAARCGQLNIGDQIIAVNGVSLVAY--------MEFLKANGIEDHSFVKEMDYQEVLNS 293
G AA +LNIGDQII +NG+SLV ++ +K + V EV
Sbjct: 837 GPAAHSNKLNIGDQIININGISLVGLPLSAAQTQIKNMKTATAVRMTVVSTPPVVEVRIR 896
Query: 294 QEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLL 353
+ +L + + ICSLLRGGIAERGG+RVGHRIIEIN SVVAV H++IVN+L
Sbjct: 897 RPDTKYQLGFSVQNGV---ICSLLRGGIAERGGIRVGHRIIEINGTSVVAVAHDRIVNML 953
Query: 354 ATSVGE 359
AT+VGE
Sbjct: 954 ATAVGE 959
>sp|Q02410|APBA1_HUMAN Amyloid beta A4 precursor protein-binding family A member 1 OS=Homo
sapiens GN=APBA1 PE=1 SV=3
Length = 837
Score = 327 bits (839), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 186/369 (50%), Positives = 239/369 (64%), Gaps = 49/369 (13%)
Query: 28 GTLFRLKFLGSVQVDEDDPKCCKRRVKKVMVEEA----------------APEGETQPST 71
G +F +LGS Q+ D K + V+ + +EA APEGE+QP T
Sbjct: 458 GIIFAANYLGSTQLLSD--KTPSKNVRMMQAQEAVSRIKMAQKLAKSRKKAPEGESQPMT 515
Query: 72 EVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKIS 131
EVDLFIST++I VLN D +E MMDH LRTISYIADIG++VVLMARRR + E + S
Sbjct: 516 EVDLFISTQRIKVLNADTQETMMDHPLRTISYIADIGNIVVLMARRRMPRSNSQENVEAS 575
Query: 132 -------RTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGIEDHSFVKEMDYQEV 184
R KMICHVFES++AQ IAQSIGQAF VAY EFL+ANGI ++ +Y ++
Sbjct: 576 HPSQDGKRQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQK-EYSDL 634
Query: 185 LNSQEIFGDELQMFAKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAA 244
LN+Q+++ D+L F+K E K+V + K KGEILGVVIVESGWGS+LPTV+IAN+ G A
Sbjct: 635 LNTQDMYNDDLIHFSKSENCKDVFIEKQKGEILGVVIVESGWGSILPTVIIANMMHGGPA 694
Query: 245 ARCGQLNIGDQIIAVNGVSLVAY-----MEFLKANGIEDHSFVKEMDYQEVLNSQEIFGD 299
+ G+LNIGDQI+++NG SLV +K G+++ S VK LN
Sbjct: 695 EKSGKLNIGDQIMSINGTSLVGLPLSTCQSIIK--GLKNQSRVK-------LNIVRCPPV 745
Query: 300 ELQMFAKKELQKE---------ICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIV 350
+ + +L+ + ICSL+RGGIAERGGVRVGHRIIEIN QSVVA PHEKIV
Sbjct: 746 TTVLIRRPDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIV 805
Query: 351 NLLATSVGE 359
++L+ +VGE
Sbjct: 806 HILSNAVGE 814
>sp|O35430|APBA1_RAT Amyloid beta A4 precursor protein-binding family A member 1
OS=Rattus norvegicus GN=Apba1 PE=1 SV=1
Length = 839
Score = 327 bits (839), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 187/369 (50%), Positives = 239/369 (64%), Gaps = 49/369 (13%)
Query: 28 GTLFRLKFLGSVQVDEDDPKCCKRRVKKVMVEEA----------------APEGETQPST 71
G +F +LGS Q+ D K + V+ + +EA APEGE+QP T
Sbjct: 460 GIIFAANYLGSTQLLSD--KTPSKNVRMMQAQEAVSRIKTAQKLAKSRKKAPEGESQPMT 517
Query: 72 EVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQ------EAD 125
EVDLFIST++I VLN D +E MMDH LRTISYIADIG++VVLMARRR EA
Sbjct: 518 EVDLFISTQRIKVLNADTQEPMMDHPLRTISYIADIGNIVVLMARRRMPRSNSQENVEAS 577
Query: 126 EPPK-ISRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGIEDHSFVKEMDYQEV 184
P + R KMICHVFES++AQ IAQSIGQAF VAY EFL+ANGI ++ +Y ++
Sbjct: 578 HPSQDAKRQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQK-EYSDL 636
Query: 185 LNSQEIFGDELQMFAKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAA 244
LN+Q+++ D+L F+K E K+V + K KGEILGVVIVESGWGS+LPTV+IAN+ G A
Sbjct: 637 LNTQDMYNDDLIHFSKSENCKDVFIEKQKGEILGVVIVESGWGSILPTVIIANMMHGGPA 696
Query: 245 ARCGQLNIGDQIIAVNGVSLVAY-----MEFLKANGIEDHSFVKEMDYQEVLNSQEIFGD 299
+ G+LNIGDQI+++NG SLV +K G+++ S VK LN
Sbjct: 697 EKSGKLNIGDQIMSINGTSLVGLPLSTCQSIIK--GLKNQSRVK-------LNIVRCPPV 747
Query: 300 ELQMFAKKELQKE---------ICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIV 350
+ + +L+ + ICSL+RGGIAERGGVRVGHRIIEIN QSVVA PHEKIV
Sbjct: 748 TTVLIRRPDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIV 807
Query: 351 NLLATSVGE 359
++L+ +VGE
Sbjct: 808 HILSNAVGE 816
>sp|B2RUJ5|APBA1_MOUSE Amyloid beta A4 precursor protein-binding family A member 1 OS=Mus
musculus GN=Apba1 PE=2 SV=2
Length = 842
Score = 327 bits (837), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 186/369 (50%), Positives = 239/369 (64%), Gaps = 49/369 (13%)
Query: 28 GTLFRLKFLGSVQVDEDDPKCCKRRVKKVMVEEA----------------APEGETQPST 71
G +F +LGS Q+ D K + V+ + +EA APEGE+QP T
Sbjct: 463 GIIFAANYLGSTQLLSD--KTPSKNVRMMQAQEAVSRIKTAQKLAKSRKKAPEGESQPMT 520
Query: 72 EVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKIS 131
EVDLFIST++I VLN D +E MMDH LRTISYIADIG++VVLMARRR + E + S
Sbjct: 521 EVDLFISTQRIKVLNADTQEPMMDHPLRTISYIADIGNIVVLMARRRMPRSNSQENVEAS 580
Query: 132 -------RTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGIEDHSFVKEMDYQEV 184
R KMICHVFES++AQ IAQSIGQAF VAY EFL+ANGI ++ +Y ++
Sbjct: 581 HPSQDGKRQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQK-EYSDL 639
Query: 185 LNSQEIFGDELQMFAKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAA 244
LN+Q+++ D+L F+K E K+V + K KGEILGVVIVESGWGS+LPTV+IAN+ G A
Sbjct: 640 LNTQDMYNDDLIHFSKSENCKDVFIEKQKGEILGVVIVESGWGSILPTVIIANMMHGGPA 699
Query: 245 ARCGQLNIGDQIIAVNGVSLVAY-----MEFLKANGIEDHSFVKEMDYQEVLNSQEIFGD 299
+ G+LNIGDQI+++NG SLV +K G+++ S VK LN
Sbjct: 700 EKSGKLNIGDQIMSINGTSLVGLPLSTCQSIIK--GLKNQSRVK-------LNIVRCPPV 750
Query: 300 ELQMFAKKELQKE---------ICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIV 350
+ + +L+ + ICSL+RGGIAERGGVRVGHRIIEIN QSVVA PHEKIV
Sbjct: 751 TTVLIRRPDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIV 810
Query: 351 NLLATSVGE 359
++L+ +VGE
Sbjct: 811 HILSNAVGE 819
>sp|O35431|APBA2_RAT Amyloid beta A4 precursor protein-binding family A member 2
OS=Rattus norvegicus GN=Apba2 PE=1 SV=1
Length = 750
Score = 306 bits (785), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 181/367 (49%), Positives = 231/367 (62%), Gaps = 44/367 (11%)
Query: 28 GTLFRLKFLGSVQV-DEDDPKCCKR---------RVKKVMVEEAA-----PEGETQPSTE 72
G +F +LGS Q+ E +P R RVK++ EG+ Q TE
Sbjct: 370 GIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVSRVKRMQKAAKIKKKANSEGDAQTLTE 429
Query: 73 VDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISR 132
VDLFIST++I VLN D +E MMDHALRTISYIADIG++VVLMARRR + + I
Sbjct: 430 VDLFISTQRIKVLNADTQETMMDHALRTISYIADIGNIVVLMARRRMPRSASQD--CIET 487
Query: 133 TP---------KMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGIEDHSFVKEMDYQE 183
TP KMICHVFES++AQ IAQSIGQAF VAY EFL+ANGI ++ +Y +
Sbjct: 488 TPGAQEGKKQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQK-EYSD 546
Query: 184 VLNSQEIFGDELQMFAKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGA 243
++N+QE++ D+L F+ E KE+ + K KGEILGVV+VESGWGS+LPTV++AN+ G
Sbjct: 547 IINTQEMYNDDLIHFSNSENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGP 606
Query: 244 AARCGQLNIGDQIIAVNGVSLVAYMEFLKANGIEDHSFVKEMDYQE--VLNSQEIFGDEL 301
AAR G+L+IGDQI+++NG SLV + GI +K + Q LN
Sbjct: 607 AARSGKLSIGDQIMSINGTSLVG-LPLATCQGI-----IKGLKNQTQVKLNIVSCPPVTT 660
Query: 302 QMFAKKELQKE---------ICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNL 352
+ + +L+ + ICSL+RGGIAERGGVRVGHRIIEIN QSVVA HEKIV
Sbjct: 661 VLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQA 720
Query: 353 LATSVGE 359
L+ SVGE
Sbjct: 721 LSNSVGE 727
>sp|P98084|APBA2_MOUSE Amyloid beta A4 precursor protein-binding family A member 2 OS=Mus
musculus GN=Apba2 PE=1 SV=2
Length = 750
Score = 306 bits (784), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 181/367 (49%), Positives = 231/367 (62%), Gaps = 44/367 (11%)
Query: 28 GTLFRLKFLGSVQV-DEDDPKCCKR---------RVKKVMVEEAA-----PEGETQPSTE 72
G +F +LGS Q+ E +P R RVK++ EG+ Q TE
Sbjct: 370 GIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVSRVKRMQKAAKIKKKANSEGDAQTLTE 429
Query: 73 VDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISR 132
VDLFIST++I VLN D +E MMDHALRTISYIADIG++VVLMARRR + + I
Sbjct: 430 VDLFISTQRIKVLNADTQETMMDHALRTISYIADIGNIVVLMARRRMPRSASQD--CIET 487
Query: 133 TP---------KMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGIEDHSFVKEMDYQE 183
TP KMICHVFES++AQ IAQSIGQAF VAY EFL+ANGI ++ +Y +
Sbjct: 488 TPGAQEGKKQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQK-EYSD 546
Query: 184 VLNSQEIFGDELQMFAKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGA 243
++N+QE++ D+L F+ E KE+ + K KGEILGVV+VESGWGS+LPTV++AN+ G
Sbjct: 547 IINTQEMYNDDLIHFSNSENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGP 606
Query: 244 AARCGQLNIGDQIIAVNGVSLVAYMEFLKANGIEDHSFVKEMDYQE--VLNSQEIFGDEL 301
AAR G+L+IGDQI+++NG SLV + GI +K + Q LN
Sbjct: 607 AARSGKLSIGDQIMSINGTSLVG-LPLATCQGI-----IKGLKNQTQVKLNIVSCPPVTT 660
Query: 302 QMFAKKELQKE---------ICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNL 352
+ + +L+ + ICSL+RGGIAERGGVRVGHRIIEIN QSVVA HEKIV
Sbjct: 661 VLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQA 720
Query: 353 LATSVGE 359
L+ SVGE
Sbjct: 721 LSNSVGE 727
>sp|Q99767|APBA2_HUMAN Amyloid beta A4 precursor protein-binding family A member 2 OS=Homo
sapiens GN=APBA2 PE=1 SV=3
Length = 749
Score = 305 bits (781), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/367 (49%), Positives = 231/367 (62%), Gaps = 44/367 (11%)
Query: 28 GTLFRLKFLGSVQV-DEDDPKCCKR---------RVKKVMVEEAA-----PEGETQPSTE 72
G +F +LGS Q+ E +P R RVK++ EG+ Q TE
Sbjct: 369 GIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVSRVKRMQKAAKIKKKANSEGDAQTLTE 428
Query: 73 VDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISR 132
VDLFIST++I VLN D +E MMDHALRTISYIADIG++VVLMARRR + + I
Sbjct: 429 VDLFISTQRIKVLNADTQETMMDHALRTISYIADIGNIVVLMARRRMPRSASQD--CIET 486
Query: 133 TP---------KMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGIEDHSFVKEMDYQE 183
TP KMICHVFES++AQ IAQSIGQAF VAY EFL+ANGI ++ +Y +
Sbjct: 487 TPGAQEGKKQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQK-EYSD 545
Query: 184 VLNSQEIFGDELQMFAKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGA 243
++N+QE++ D+L F+ E KE+ + K KGEILGVV+VESGWGS+LPTV++AN+ G
Sbjct: 546 IINTQEMYNDDLIHFSNSENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGP 605
Query: 244 AARCGQLNIGDQIIAVNGVSLVAYMEFLKANGIEDHSFVKEMDYQE--VLNSQEIFGDEL 301
AAR G+L+IGDQI+++NG SLV + GI +K + Q LN
Sbjct: 606 AARSGKLSIGDQIMSINGTSLVG-LPLATCQGI-----IKGLKNQTQVKLNIVSCPPVTT 659
Query: 302 QMFAKKELQKE---------ICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNL 352
+ + +L+ + ICSL+RGGIAERGGVRVGHRIIEIN QSVVA HEKIV
Sbjct: 660 VLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQA 719
Query: 353 LATSVGE 359
L+ SVGE
Sbjct: 720 LSNSVGE 726
>sp|Q5RD33|APBA2_PONAB Amyloid beta A4 precursor protein-binding family A member 2
OS=Pongo abelii GN=APBA2 PE=2 SV=1
Length = 749
Score = 304 bits (778), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 180/367 (49%), Positives = 230/367 (62%), Gaps = 44/367 (11%)
Query: 28 GTLFRLKFLGSVQV-DEDDPKCCKR---------RVKKVMVEEAA-----PEGETQPSTE 72
G +F +LGS Q+ E +P R RVK++ EG+ Q TE
Sbjct: 369 GIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVSRVKRMQKAAKIKKKANSEGDAQTLTE 428
Query: 73 VDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISR 132
VDLFIS ++I VLN D +E MMDHALRTISYIADIG++VVLMARRR + + I
Sbjct: 429 VDLFISAQRIKVLNADTQETMMDHALRTISYIADIGNIVVLMARRRMPRSASQD--CIET 486
Query: 133 TP---------KMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGIEDHSFVKEMDYQE 183
TP KMICHVFES++AQ IAQSIGQAF VAY EFL+ANGI ++ +Y +
Sbjct: 487 TPGAQEGKKQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQK-EYSD 545
Query: 184 VLNSQEIFGDELQMFAKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGA 243
++N+QE++ D+L F+ E KE+ + K KGEILGVV+VESGWGS+LPTV++AN+ G
Sbjct: 546 IINTQEMYNDDLIHFSNSENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGP 605
Query: 244 AARCGQLNIGDQIIAVNGVSLVAYMEFLKANGIEDHSFVKEMDYQE--VLNSQEIFGDEL 301
AAR G+L+IGDQI+++NG SLV + GI +K + Q LN
Sbjct: 606 AARSGKLSIGDQIMSINGTSLVG-LPLATCQGI-----IKGLKNQTQVKLNIVSCPPVTT 659
Query: 302 QMFAKKELQKE---------ICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNL 352
+ + +L+ + ICSL+RGGIAERGGVRVGHRIIEIN QSVVA HEKIV
Sbjct: 660 VLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQA 719
Query: 353 LATSVGE 359
L+ SVGE
Sbjct: 720 LSNSVGE 726
>sp|O70248|APBA3_RAT Amyloid beta A4 precursor protein-binding family A member 3
OS=Rattus norvegicus GN=Apba3 PE=2 SV=2
Length = 569
Score = 270 bits (689), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/337 (44%), Positives = 208/337 (61%), Gaps = 19/337 (5%)
Query: 28 GTLFRLKFLGSVQV-DEDDPKCCKR--RVKKVMVEEAAPEGETQPSTEVDLFISTEKIMV 84
G LF K+LGS Q+ E +P R + ++ M APEGETQP TEVD+FIST+++ V
Sbjct: 213 GVLFGAKYLGSTQLLSERNPPPSTRMGQAQEAMDRVKAPEGETQPMTEVDIFISTKRVKV 272
Query: 85 LNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESD 144
L D ++ +MDHAL+TISYIADIG ++VLMARRR + + + + KM+CHVF S+
Sbjct: 273 LAADSQDALMDHALQTISYIADIGPVLVLMARRRLAKRTTSQ-DRQRQLYKMLCHVFHSE 331
Query: 145 EAQFIAQSIGQAFQVAYMEFLKANGIEDHSFVKEMDYQEVLNSQEIFGDELQMFAKKELQ 204
+AQ IAQ+IGQAF +AY +FL+ N I+ ++ Q ++ +L F +
Sbjct: 332 DAQLIAQAIGQAFSIAYSQFLQENRIDP----SQVGMQPSASASHPHNGDLDHFCNSQNC 387
Query: 205 KEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 264
+EV + K GE LGV +VESGWGS+LPT VIANL G A RCG L+IGD++ A+NG SL
Sbjct: 388 REVCIQKRPGEGLGVALVESGWGSLLPTAVIANLLHGGPAERCGALSIGDRVTAINGTSL 447
Query: 265 V--------AYMEFLKANGIEDHSFVKEMDYQEVLNSQEIFGDELQMFAKKELQKEICSL 316
V A + ++ + S + + + ++L + + ICSL
Sbjct: 448 VGLSLAACQAAVREVRRHSSVTLSIIHCPPVTTAVIHRPHVREQLGFCVENGI---ICSL 504
Query: 317 LRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLL 353
LRG AERGGVRVGHRIIE+N QSVVA+PH +I+ LL
Sbjct: 505 LRGSAAERGGVRVGHRIIEVNGQSVVAMPHARIIQLL 541
>sp|O96018|APBA3_HUMAN Amyloid beta A4 precursor protein-binding family A member 3 OS=Homo
sapiens GN=APBA3 PE=1 SV=1
Length = 575
Score = 258 bits (658), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 158/346 (45%), Positives = 212/346 (61%), Gaps = 25/346 (7%)
Query: 28 GTLFRLKFLGSVQ-VDEDDPKCCKR--RVKKVMVEEAAPEGETQPSTEVDLFISTEKIMV 84
G +F ++LGS Q V E +P R + ++ M AP+GETQP TEVDLF+ST++I V
Sbjct: 218 GVIFGARYLGSTQLVSERNPPTSTRMAQAREAMDRVKAPDGETQPMTEVDLFVSTKRIKV 277
Query: 85 LNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESD 144
L D +E MMDHAL TISY ADIG ++VLMARRR + A + R KM+CHVF ++
Sbjct: 278 LTADSQEAMMDHALHTISYTADIGCVLVLMARRRLARRPAPQ-DHGRRLYKMLCHVFYAE 336
Query: 145 EAQFIAQSIGQAFQVAYMEFLKANGIEDHSFVKEMDYQEVLNSQEIFGDELQMFAKKELQ 204
+AQ IAQ+IGQAF AY +FL+ +GI+ ++ + + +L F+ +
Sbjct: 337 DAQLIAQAIGQAFAAAYSQFLRESGIDP----SQVGVHPSPGACHLHNGDLDHFSNSDNC 392
Query: 205 KEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 264
+EV + K +GE LGV +VESGWGS+LPT VIANL G A R G L+IGD++ A+NG SL
Sbjct: 393 REVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSL 452
Query: 265 VAYMEFLKANGIEDHSFVKEMDYQEVLNSQEIFGDEL------QMFAKKEL-----QKEI 313
V L A + V+E Q + + + + A+++L I
Sbjct: 453 VGLP--LAAC----QAAVRETKSQTSVTLSIVHCPPVTTAIIHRPHAREQLGFCVEDGII 506
Query: 314 CSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVGE 359
CSLLRGGIAERGG+RVGHRIIEIN QSVVA PH +I+ LL + GE
Sbjct: 507 CSLLRGGIAERGGIRVGHRIIEINGQSVVATPHARIIELLTEAYGE 552
>sp|O88888|APBA3_MOUSE Amyloid beta A4 precursor protein-binding family A member 3 OS=Mus
musculus GN=Apba3 PE=1 SV=1
Length = 571
Score = 250 bits (639), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/338 (44%), Positives = 206/338 (60%), Gaps = 21/338 (6%)
Query: 28 GTLFRLKFLGSVQV-DEDDPKCCKR--RVKKVMVEEAAPEGETQPSTEVDLFISTEKIMV 84
G +F K+LGS Q+ E P R + ++ M APEGETQP EVD+FIST+++ V
Sbjct: 215 GVIFGAKYLGSTQLLSERSPAPSTRMGQAQEAMDRVKAPEGETQPMVEVDIFISTKRVKV 274
Query: 85 LNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESD 144
L D ++ +MDHAL+TISYIADIG ++VLMARRR + + + R KM+CHVF S+
Sbjct: 275 LAADSQDALMDHALQTISYIADIGPVLVLMARRRLARRTTPQ-DRQRRLYKMLCHVFHSE 333
Query: 145 EAQFIAQSIGQAFQVAYMEFLKANGIEDHSFVKEMDYQEVLNSQEIFGDELQMFAKKELQ 204
+AQ IAQ+IGQAF +AY +FL+ N I+ ++ Q + +L F +
Sbjct: 334 DAQLIAQAIGQAFSIAYSQFLQENRIDP----SQVGTQPSTAASHPHNGDLDHFCNSQNC 389
Query: 205 KEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 264
+EV + K GE LGV +VESGWGS+LPT VIANL G A RCG L+IGD++ A+NG SL
Sbjct: 390 REVCIQKRPGEGLGVALVESGWGSLLPTAVIANLLHGGPAERCGALSIGDRVTAINGTSL 449
Query: 265 V---------AYMEFLKANGIEDHSFVKEMDYQEVLNSQEIFGDELQMFAKKELQKEICS 315
V A E + + + S + + + ++L + + ICS
Sbjct: 450 VGLSLAACQAAVREVRRLSSV-TLSIIHCPPVTTAVIRRPHVREQLGFCVEDGI---ICS 505
Query: 316 LLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLL 353
LLRGG AERGGVRVGHRIIE+N QSVVA+PH +I+ LL
Sbjct: 506 LLRGGAAERGGVRVGHRIIEVNGQSVVAMPHARIIQLL 543
>sp|Q7KRY7|LAP4_DROME Protein lap4 OS=Drosophila melanogaster GN=scrib PE=1 SV=1
Length = 1851
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 35/193 (18%)
Query: 198 FAKKELQKEVVVPKAKGEILGVVIVESG------WGSMLPTVVIANLAPAGAAARCGQLN 251
A+ + +EVV+PK +G LG I+ +G+ P + I+++ P G A++CG+L
Sbjct: 1231 LAEPLISEEVVLPKNQGS-LGFSIIGGTDHSCVPFGTREPGIFISHIVPGGIASKCGKLR 1289
Query: 252 IGDQIIAVNGVSLV------AYMEFLKANGIEDHSFVKEMD-----YQEVLNSQEIFGDE 300
+GD+I+ VN + A +E LK ++ + D +QEVL S+ G+
Sbjct: 1290 MGDRILKVNEADVSKATHQDAVLELLKPG--DEIKLTIQHDPLPPGFQEVLLSK-AEGER 1346
Query: 301 LQMFAKKELQKE-------------ICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPH 346
L M K L + + + G A R G ++VG R++E+N S++ H
Sbjct: 1347 LGMHIKGGLNGQRGNPADPSDEGVFVSKINSVGAARRDGRLKVGMRLLEVNGHSLLGASH 1406
Query: 347 EKIVNLLATSVGE 359
+ VN+L + E
Sbjct: 1407 QDAVNVLRNAGNE 1419
>sp|Q32PV0|GULP1_DANRE PTB domain-containing engulfment adapter protein 1 OS=Danio rerio
GN=gulp1 PE=2 SV=1
Length = 300
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 16/143 (11%)
Query: 31 FRLKFLGSVQVDEDDPK---CCKRRVKKVMVEEAAPEGETQPSTEVDLFISTEKIMVLNT 87
+ KFLG+ +VD+ PK K V+K+ + + E Q +V+L IS + +L+
Sbjct: 27 YNAKFLGNTEVDQ--PKGTEVVKDAVRKLKFQRHIKKSEGQKLPKVELQISIYGVKILDP 84
Query: 88 DLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE-A 146
KE+ + L IS+ AD + F+ ++ S + K +C+VF+S++ A
Sbjct: 85 KSKEVQYNCQLHRISFCADDKTDKRIFT---FICKD-------SESNKHLCYVFDSEKCA 134
Query: 147 QFIAQSIGQAFQVAYMEFLKANG 169
+ I +IGQAF +AY +FL++ G
Sbjct: 135 EEITLTIGQAFDLAYKKFLESGG 157
>sp|Q9UBP9|GULP1_HUMAN PTB domain-containing engulfment adapter protein 1 OS=Homo sapiens
GN=GULP1 PE=1 SV=1
Length = 304
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 16/143 (11%)
Query: 31 FRLKFLGSVQVDEDDPK---CCKRRVKKVMVEEAAPEGETQPSTEVDLFISTEKIMVLNT 87
+ KFLGS +V++ PK + V+K+ + E Q +V+L IS + +L
Sbjct: 27 YNAKFLGSTEVEQ--PKGTEVVRDAVRKLKFARHIKKSEGQKIPKVELQISIYGVKILEP 84
Query: 88 DLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE-A 146
KE+ + L IS+ AD + F+ ++ S + K +C+VF+S++ A
Sbjct: 85 KTKEVQHNCQLHRISFCADDKTDKRIFT---FICKD-------SESNKHLCYVFDSEKCA 134
Query: 147 QFIAQSIGQAFQVAYMEFLKANG 169
+ I +IGQAF +AY +FL++ G
Sbjct: 135 EEITLTIGQAFDLAYRKFLESGG 157
>sp|Q5PQS4|GULP1_RAT PTB domain-containing engulfment adapter protein 1 OS=Rattus
norvegicus GN=Gulp1 PE=1 SV=1
Length = 304
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 16/143 (11%)
Query: 31 FRLKFLGSVQVDEDDPK---CCKRRVKKVMVEEAAPEGETQPSTEVDLFISTEKIMVLNT 87
+ KFLGS +V++ PK + V+K+ + E Q +V+L IS + +L
Sbjct: 27 YNAKFLGSTEVEQ--PKGTEVVRDAVRKLKFARHIKKSEGQKIPKVELQISIYGVKILEP 84
Query: 88 DLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE-A 146
KE+ + L IS+ AD + F+ ++ S + K +C VF+S++ A
Sbjct: 85 KTKEVQHNCQLHRISFCADDKTDKRIFT---FICKD-------SESNKHLCFVFDSEKCA 134
Query: 147 QFIAQSIGQAFQVAYMEFLKANG 169
+ I +IGQAF +AY +FL++ G
Sbjct: 135 EEITLTIGQAFDLAYRKFLESGG 157
>sp|Q8K2A1|GULP1_MOUSE PTB domain-containing engulfment adapter protein 1 OS=Mus musculus
GN=Gulp1 PE=1 SV=1
Length = 304
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 16/143 (11%)
Query: 31 FRLKFLGSVQVDEDDPK---CCKRRVKKVMVEEAAPEGETQPSTEVDLFISTEKIMVLNT 87
+ KFLGS +V++ PK + V+K+ + E Q +V+L IS + +L
Sbjct: 27 YNAKFLGSTEVEQ--PKGTEVVRDAVRKLKFARHIKKSEGQKIPKVELQISIYGVKILEP 84
Query: 88 DLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE-A 146
KE+ + L IS+ AD + F+ ++ S + K +C VF+S++ A
Sbjct: 85 KTKEVQHNCQLHRISFCADDKTDKRIFT---FICKD-------SESNKHLCFVFDSEKCA 134
Query: 147 QFIAQSIGQAFQVAYMEFLKANG 169
+ I +IGQAF +AY +FL++ G
Sbjct: 135 EEITLTIGQAFDLAYRKFLESGG 157
>sp|Q80U72|SCRIB_MOUSE Protein scribble homolog OS=Mus musculus GN=Scrib PE=1 SV=2
Length = 1612
Score = 48.1 bits (113), Expect = 1e-04, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 67/201 (33%)
Query: 205 KEVVVPKAKGEILGVVIVESG------WGSMLPTVVIANLAPAGAAARCGQLNIGDQIIA 258
+E+ +P+A G LG+ IV +G P V I+ + P G AARCG L +GD+I+A
Sbjct: 989 EEICLPRAGGP-LGLSIVGGSDHSSHPFGVQDPGVFISKVLPRGLAARCG-LRVGDRILA 1046
Query: 259 VNGVSLVAYMEFLKANGIEDHSFVKEMDYQEVLNSQEIFGDELQMFAKKEL----QKEIC 314
VNG V+E +QE +++ EL + +++ +E+C
Sbjct: 1047 VNGQD------------------VREATHQEAVSALLRPCLELCLLVRRDPPPPGMRELC 1088
Query: 315 SLL----RGGIAERGG--------------------------------VRVGHRIIEINN 338
+ GI+ RGG +RVG R++E+N
Sbjct: 1089 IQKAPGEKLGISIRGGAKGHAGNPCDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQ 1148
Query: 339 QSVVAVPHEKIVNLLATSVGE 359
QS++ + H + V LL SVG+
Sbjct: 1149 QSLLGLTHAEAVQLL-RSVGD 1168
Score = 37.0 bits (84), Expect = 0.26, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 176 VKEMDYQEVLNSQEIFGDELQMFAKKEL----QKEVVVPKAKGEILGVVIVESGWGSM-- 229
V+E +QE +++ EL + +++ +E+ + KA GE LG+ I G
Sbjct: 1052 VREATHQEAVSALLRPCLELCLLVRRDPPPPGMRELCIQKAPGEKLGISIRGGAKGHAGN 1111
Query: 230 --LPT---VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA 266
PT + I+ ++P GAA R G+L +G +++ VN SL+
Sbjct: 1112 PCDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLG 1153
Score = 35.4 bits (80), Expect = 0.73, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 233 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 264
+ I+ +A GAA R G L +GD+++++NGV +
Sbjct: 878 IFISRIAEGGAAHRAGTLQVGDRVLSINGVDM 909
>sp|A8E0R9|GRIP2_XENLA Glutamate receptor-interacting protein 2 OS=Xenopus laevis GN=grip2
PE=2 SV=2
Length = 1083
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 36/230 (15%)
Query: 157 FQVAYMEFLKANGIEDHSFVKEMDYQEVLNSQEIFGDELQMFAKKELQKE-------VVV 209
F + + A G + +F K+ D +++ G++L + ++++ E V +
Sbjct: 3 FFQTILRWKTAKGQKSVTFKKD-DGPYSKGNKDPAGNDLALVSRRQSIPEEFRGVTIVEL 61
Query: 210 PKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL----- 264
K +G LG+ I SG ++NL P G AAR QLNIGD I +VNG++L
Sbjct: 62 IKKEGSTLGLTI--SGGTDKDGKPRVSNLRPGGLAARSDQLNIGDYIKSVNGINLTKLRH 119
Query: 265 --------------VAYMEFLKANGIEDHSFVKEMDYQEVLNSQE--IFGDELQMFAKKE 308
V +E+ G D+S E+ +E FG ++ A ++
Sbjct: 120 EEIISLLKNVGERVVLEVEYELPPGTPDNSSAIIPKTIEITLCKEGNSFGFVMRGGAHED 179
Query: 309 LQKE---ICSLLR-GGIAER-GGVRVGHRIIEINNQSVVAVPHEKIVNLL 353
K + + +R GG A+R G ++VG R++ ++ S+ + H +++L
Sbjct: 180 WHKSRALVVTYVRPGGPADREGTLKVGDRLLCVDGISLHNITHTDALSIL 229
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 38/175 (21%)
Query: 207 VVVPKAKGEILGVVIVESGWGSMLP--TVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 264
V +PK KG LG+ I S P ++I+++ A R G L GD+++A++ + L
Sbjct: 570 VKLPKRKGVELGITISSS----RKPGEPLIISDIKKGSVAHRTGTLEPGDKLLAIDNIRL 625
Query: 265 -VAYME-------------FLKANGIEDHSFVKEMDYQEVLNSQEIFGDELQMFAKK--- 307
ME LK ED+S D QE + I+ EL+ +
Sbjct: 626 DNCSMEDAVQILRQCEDLVKLKIRKDEDNS-----DEQET-SGAIIYTVELKRYGGPLGI 679
Query: 308 --ELQKE------ICSLLRGGIAER-GGVRVGHRIIEINNQSVVAVPHEKIVNLL 353
+E I L + G+AER G + +G RI+ INN S+ P + ++LL
Sbjct: 680 TISGTEEPFDPIVISGLTKRGLAERTGAIHIGDRILAINNISLKGKPLSEAIHLL 734
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 207 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVS 263
V + K G LG+ + +G +VI + PA RCG L+ GD I++++G S
Sbjct: 259 VEIAKTPGSTLGISL-STGTHRNKQVIVIDKVKPASVVDRCGALHPGDHILSIDGTS 314
Score = 32.0 bits (71), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 234 VIANLAPAGAAARCGQLNIGDQIIAVNGV 262
+I + P A RCG L +GD+++++NG+
Sbjct: 498 LIRFIEPDSPAERCGLLQVGDRLLSINGI 526
>sp|Q6S5L9|SHC4_MOUSE SHC-transforming protein 4 OS=Mus musculus GN=Shc4 PE=1 SV=1
Length = 626
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 20/101 (19%)
Query: 72 EVDLFISTEKIMVLNTDLKEIMMDHALRTISYIA----DIGDLVVLMARRRFVSQEADEP 127
+ L +ST + ++N D ++I+ +H +++IS+ + D D V +A+ V+Q A
Sbjct: 261 NIKLTVSTSSLTLMNLDNQQIIANHQMQSISFASGGDPDTTDYVAYVAKDP-VNQRA--- 316
Query: 128 PKISRTPKMICHVFE--SDEAQFIAQSIGQAFQVAYMEFLK 166
CH+ E S AQ + +IGQAF++ + ++LK
Sbjct: 317 ----------CHILECRSGMAQDVISTIGQAFELRFKQYLK 347
>sp|Q6S5L8|SHC4_HUMAN SHC-transforming protein 4 OS=Homo sapiens GN=SHC4 PE=1 SV=1
Length = 630
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 20/101 (19%)
Query: 72 EVDLFISTEKIMVLNTDLKEIMMDHALRTISYIA----DIGDLVVLMARRRFVSQEADEP 127
+ L IST + ++N D ++I+ +H +++IS+ + D D V +A+ V+Q A
Sbjct: 261 NIKLTISTCSLTLMNLDNQQIIANHHMQSISFASGGDPDTTDYVAYVAKDP-VNQRA--- 316
Query: 128 PKISRTPKMICHVFESDE--AQFIAQSIGQAFQVAYMEFLK 166
CH+ E AQ + +IGQAF++ + ++LK
Sbjct: 317 ----------CHILECHNGMAQDVISTIGQAFELRFKQYLK 347
>sp|Q8AY68|SHC1_XENLA SHC-transforming protein 1 OS=Xenopus laevis GN=shc1 PE=1 SV=2
Length = 465
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 20/100 (20%)
Query: 73 VDLFISTEKIMVLNTDLKEIMMDHALRTISYIA----DIGDLVVLMARRRFVSQEADEPP 128
+ L +ST + ++ +D K+I+ +H +++IS+ + D + V +A+ V+Q A
Sbjct: 120 ITLTVSTSSLNLMASDCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDP-VNQRA---- 174
Query: 129 KISRTPKMICHVFESDE--AQFIAQSIGQAFQVAYMEFLK 166
CH+ E E AQ + +IGQAF++ + ++LK
Sbjct: 175 ---------CHILECPEGLAQDVISTIGQAFELRFKQYLK 205
>sp|P29353|SHC1_HUMAN SHC-transforming protein 1 OS=Homo sapiens GN=SHC1 PE=1 SV=4
Length = 583
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 73 VDLFISTEKIMVLNTDLKEIMMDHALRTISYIA----DIGDLVVLMARRRFVSQEADEPP 128
+ L +ST + ++ D K+I+ +H +++IS+ + D + V +A+ V+Q A
Sbjct: 232 ITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDP-VNQRA---- 286
Query: 129 KISRTPKMICHVFESDE--AQFIAQSIGQAFQVAYMEFLK 166
CH+ E E AQ + +IGQAF++ + ++L+
Sbjct: 287 ---------CHILECPEGLAQDVISTIGQAFELRFKQYLR 317
>sp|Q5R7W7|SHC1_PONAB SHC-transforming protein 1 OS=Pongo abelii GN=SHC1 PE=2 SV=1
Length = 583
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 73 VDLFISTEKIMVLNTDLKEIMMDHALRTISYIA----DIGDLVVLMARRRFVSQEADEPP 128
+ L +ST + ++ D K+I+ +H +++IS+ + D + V +A+ V+Q A
Sbjct: 232 ITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDP-VNQRA---- 286
Query: 129 KISRTPKMICHVFESDE--AQFIAQSIGQAFQVAYMEFLK 166
CH+ E E AQ + +IGQAF++ + ++L+
Sbjct: 287 ---------CHILECPEGLAQDVISTIGQAFELRFKQYLR 317
>sp|P98083|SHC1_MOUSE SHC-transforming protein 1 OS=Mus musculus GN=Shc1 PE=1 SV=3
Length = 579
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 73 VDLFISTEKIMVLNTDLKEIMMDHALRTISYIA----DIGDLVVLMARRRFVSQEADEPP 128
+ L +ST + ++ D K+I+ +H +++IS+ + D + V +A+ V+Q A
Sbjct: 232 ITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDP-VNQRA---- 286
Query: 129 KISRTPKMICHVFESDE--AQFIAQSIGQAFQVAYMEFLK 166
CH+ E E AQ + +IGQAF++ + ++L+
Sbjct: 287 ---------CHILECPEGLAQDVISTIGQAFELRFKQYLR 317
>sp|Q0IIE2|SHC1_BOVIN SHC-transforming protein 1 OS=Bos taurus GN=SHC1 PE=2 SV=1
Length = 473
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 73 VDLFISTEKIMVLNTDLKEIMMDHALRTISYIA----DIGDLVVLMARRRFVSQEADEPP 128
+ L +ST + ++ D K+I+ +H +++IS+ + D + V +A+ V+Q A
Sbjct: 122 ITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDP-VNQRA---- 176
Query: 129 KISRTPKMICHVFESDE--AQFIAQSIGQAFQVAYMEFLK 166
CH+ E E AQ + +IGQAF++ + ++L+
Sbjct: 177 ---------CHILECPEGLAQDVISTIGQAFELRFKQYLR 207
>sp|Q14160|SCRIB_HUMAN Protein scribble homolog OS=Homo sapiens GN=SCRIB PE=1 SV=4
Length = 1630
Score = 44.3 bits (103), Expect = 0.001, Method: Composition-based stats.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 67/201 (33%)
Query: 205 KEVVVPKAKGEILGVVIVESG------WGSMLPTVVIANLAPAGAAARCGQLNIGDQIIA 258
+E+ +P+A G LG+ IV +G P V I+ + P G AAR G L +GD+I+A
Sbjct: 1003 EEIRLPRAGGP-LGLSIVGGSDHSSHPFGVQEPGVFISKVLPRGLAARSG-LRVGDRILA 1060
Query: 259 VNGVSLVAYMEFLKANGIEDHSFVKEMDYQEVLNSQEIFGDELQMFAKKELQ----KEIC 314
VNG V++ +QE +++ EL + +++ +E+C
Sbjct: 1061 VNGQD------------------VRDATHQEAVSALLRPCLELSLLVRRDPAPPGLRELC 1102
Query: 315 SLL----RGGIAERGG--------------------------------VRVGHRIIEINN 338
R GI+ RGG +RVG R++E+N
Sbjct: 1103 IQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQ 1162
Query: 339 QSVVAVPHEKIVNLLATSVGE 359
QS++ + H + V LL SVG+
Sbjct: 1163 QSLLGLTHGEAVQLL-RSVGD 1182
Score = 34.3 bits (77), Expect = 1.5, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 233 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 264
+ ++ +A GAA R G L +GD+++++NGV +
Sbjct: 892 IFVSRIAEGGAAHRAGTLQVGDRVLSINGVDV 923
>sp|Q5M824|SHC1_RAT SHC-transforming protein 1 OS=Rattus norvegicus GN=Shc1 PE=1 SV=1
Length = 469
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 73 VDLFISTEKIMVLNTDLKEIMMDHALRTISYIA----DIGDLVVLMARRRFVSQEADEPP 128
+ L +ST + ++ D K+I+ +H +++IS+ + D + V +A+ V+Q A
Sbjct: 122 ITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDP-VNQRA---- 176
Query: 129 KISRTPKMICHVFESDE--AQFIAQSIGQAFQVAYMEFLK 166
CH+ E E AQ + +IGQAF++ + ++L+
Sbjct: 177 ---------CHILECPEGLAQDVISTIGQAFELRFKQYLR 207
>sp|P97879|GRIP1_RAT Glutamate receptor-interacting protein 1 OS=Rattus norvegicus
GN=Grip1 PE=1 SV=1
Length = 1112
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 32/173 (18%)
Query: 207 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL-V 265
V +PK LG+ I +VI+++ A R G L +GD+++A++ + L
Sbjct: 573 VKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDS 632
Query: 266 AYME-------------FLKANGIEDHSFVKEMDYQEVLNSQEIFGDELQMFAKK----- 307
ME LK ED+S D QE + I+ EL+ +
Sbjct: 633 CSMEDAVQILQQCEDLVKLKIRKDEDNS-----DEQES-SGAIIYTVELKRYGGPLGITI 686
Query: 308 ELQKE------ICSLLRGGIAER-GGVRVGHRIIEINNQSVVAVPHEKIVNLL 353
+E I SL +GG+AER G + +G RI+ IN+ S+ P + ++LL
Sbjct: 687 SGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLL 739
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 31/147 (21%)
Query: 235 IANLAPAGAAARCGQLNIGDQIIAVNGVSLVAY-----MEFLKANGIEDHSFVKEMDYQ- 288
++NL G AAR QL++GD I AVNG++L + + LK G V E++Y+
Sbjct: 80 VSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVG---ERVVLEVEYEL 136
Query: 289 ---------------EVLNSQE--IFGDELQMFAKKELQKE----ICSLLRGGIAER-GG 326
EV +E FG ++ A + K I + GG A+R G
Sbjct: 137 PPVSIQGSSVMFRTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGT 196
Query: 327 VRVGHRIIEINNQSVVAVPHEKIVNLL 353
++ G R++ ++ ++ H + +++L
Sbjct: 197 IKPGDRLLSVDGIRLLGTTHAEAMSIL 223
Score = 36.6 bits (83), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 207 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 264
V V K G LGV + S + +VI + A A RCG L++GD I++++G S+
Sbjct: 253 VEVAKTPGASLGVALTTSVCCNKQ-VIVIDKIKSASIADRCGALHVGDHILSIDGTSM 309
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 24/133 (18%)
Query: 244 AARCGQLNIGDQIIAVNGVSLVAYMEFLKANG-IEDHSFVK------EMDYQE-VLNSQE 295
A RCG L IGD+++A+NG+ F +AN + D S E D E V+ S
Sbjct: 511 AERCGVLQIGDRVMAINGIP-TEDSTFEEANQLLRDSSITSKVTLEIEFDVAESVIPSSG 569
Query: 296 IFGDELQMFAKKELQKEICS--------------LLRGGIAER-GGVRVGHRIIEINNQS 340
F +L EL I S + +G +A R G + +G +++ I+N
Sbjct: 570 TFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIR 629
Query: 341 VVAVPHEKIVNLL 353
+ + E V +L
Sbjct: 630 LDSCSMEDAVQIL 642
>sp|Q9Y3R0|GRIP1_HUMAN Glutamate receptor-interacting protein 1 OS=Homo sapiens GN=GRIP1
PE=1 SV=3
Length = 1128
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 32/173 (18%)
Query: 207 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL-V 265
V +PK LG+ I +VI+++ A R G L +GD+++A++ + L
Sbjct: 574 VKLPKKHNVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDN 633
Query: 266 AYME-------------FLKANGIEDHSFVKEMDYQEVLNSQEIFGDELQMFAKK----- 307
ME LK ED+S D QE + I+ EL+ +
Sbjct: 634 CSMEDAVQILQQCEDLVKLKIRKDEDNS-----DEQES-SGAIIYTVELKRYGGPLGITI 687
Query: 308 ELQKE------ICSLLRGGIAER-GGVRVGHRIIEINNQSVVAVPHEKIVNLL 353
+E I SL +GG+AER G + +G RI+ IN+ S+ P + ++LL
Sbjct: 688 SGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLL 740
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 33/171 (19%)
Query: 211 KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVAY--- 267
K +G LG+ + SG ++NL G AAR QL++GD I AVNG++L +
Sbjct: 58 KKEGTTLGLTV--SGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHD 115
Query: 268 --MEFLKANGIEDHSFVKEMDYQ----------------EVLNSQE--IFGDELQMFAKK 307
+ LK G V E++Y+ EV +E FG ++ A
Sbjct: 116 EIISLLKNVG---ERVVLEVEYELPPVSVQGSSVIFRTVEVTLHKEGNTFGFVIRGGAHD 172
Query: 308 ELQKE----ICSLLRGGIAER-GGVRVGHRIIEINNQSVVAVPHEKIVNLL 353
+ K I + GG A+R G ++ G R++ ++ ++ H + +++L
Sbjct: 173 DRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSIL 223
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 207 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 264
V V K G LGV + S + +VI + A A RCG L++GD I++++G S+
Sbjct: 253 VEVAKTPGASLGVALTTSMCCNKQ-VIVIDKIKSASIADRCGALHVGDHILSIDGTSM 309
>sp|Q92529|SHC3_HUMAN SHC-transforming protein 3 OS=Homo sapiens GN=SHC3 PE=1 SV=1
Length = 594
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 53/193 (27%)
Query: 13 QALPEDP-----VVDTGLGPGTLFRLKFLGSVQV----------------DEDDPKCC-- 49
+ LP P D LGPG + +K+LG ++V E + C
Sbjct: 132 EPLPRPPRGAPHASDQVLGPGVTYVVKYLGCIEVLRSMRSLDFSTRTQITREAISRVCEA 191
Query: 50 ---------KRRVKKVMVEEAAPEGETQ-PSTEVDLFISTEKIMVLNTDLKEIMMDHALR 99
KR+ M+ + Q + L IST + + D K+I+ +H +R
Sbjct: 192 VPGAKGAFKKRKPPSKMLSSILGKSNLQFAGMSISLTISTASLNLRTPDSKQIIANHHMR 251
Query: 100 TISYIA----DIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE--AQFIAQSI 153
+IS+ + D D V +A+ V++ A CH+ E + AQ + SI
Sbjct: 252 SISFASGGDPDTTDYVAYVAKDP-VNRRA-------------CHILECCDGLAQDVIGSI 297
Query: 154 GQAFQVAYMEFLK 166
GQAF++ + ++L+
Sbjct: 298 GQAFELRFKQYLQ 310
>sp|Q8NI35|INADL_HUMAN InaD-like protein OS=Homo sapiens GN=INADL PE=1 SV=3
Length = 1801
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 22/174 (12%)
Query: 205 KEVVVPKAKGEI-LGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVS 263
+E+++ +KG LG+ IV G + L +VI + GAAAR G+L GDQI+ VNGV
Sbjct: 1434 QEMIIEISKGRSGLGLSIV-GGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVD 1492
Query: 264 L--VAYMEFLKA-----NGIEDHSFVKEMDYQEVLNSQEIFGDELQMFAKKELQKE---- 312
L ++ E + A + + E Y++ N EIF +LQ A + L
Sbjct: 1493 LRNSSHEEAITALRQTPQKVRLVVYRDEAHYRDEEN-LEIFPVDLQKKAGRGLGLSIVGK 1551
Query: 313 -------ICSLLRGGIAERGGVRV-GHRIIEINNQSVVAVPHEKIVNLLATSVG 358
I +++GG A+ G + G +I+ +N + + E + +L + G
Sbjct: 1552 RNGSGVFISDIVKGGAADLDGRLIQGDQILSVNGEDMRNASQETVATILKCAQG 1605
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 205 KEVVVPKAKGEILGVVIVESGWGSMLP--TVVIANLAPAGAAARCGQLNIGDQIIAVNGV 262
+ V + + + LG+ I G GS L V IA + +G AAR +L +GD+I+++NG
Sbjct: 1675 RTVEINRELSDALGISIA-GGRGSPLGDIPVFIAMIQASGVAARTQKLKVGDRIVSINGQ 1733
Query: 263 SL 264
L
Sbjct: 1734 PL 1735
Score = 32.7 bits (73), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 178 EMDYQEVLNSQEIFGDELQMFAKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIAN 237
E+D+ +N++E EL +++ E++ +V KG ++ + +VI +
Sbjct: 660 EVDHNMDVNTEEDDDGELALWSP-EVKIVELVKDCKGLGFSILDYQDPLDPTRSVIVIRS 718
Query: 238 LAPAGAAARCGQLNIGDQIIAVN-----GVSLVAYMEFLKA 273
L G A R G L GD++++VN SL +E LKA
Sbjct: 719 LVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKA 759
Score = 32.3 bits (72), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 320 GIAERG-GVRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358
G+A R ++VG RI+ IN Q + + H +VNLL + G
Sbjct: 1713 GVAARTQKLKVGDRIVSINGQPLDGLSHADVVNLLKNAYG 1752
>sp|Q925T6|GRIP1_MOUSE Glutamate receptor-interacting protein 1 OS=Mus musculus GN=Grip1
PE=1 SV=1
Length = 1127
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 32/173 (18%)
Query: 207 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL-V 265
V +PK LG+ I +VI+++ A R G L +GD+++A++ + L
Sbjct: 573 VKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDN 632
Query: 266 AYME-------------FLKANGIEDHSFVKEMDYQEVLNSQEIFGDELQMFAKK----- 307
ME LK ED+S D QE + I+ EL+ +
Sbjct: 633 CSMEDAVQILQQCEDLVKLKIRKDEDNS-----DEQES-SGAIIYTVELKRYGGPLGITI 686
Query: 308 ELQKE------ICSLLRGGIAER-GGVRVGHRIIEINNQSVVAVPHEKIVNLL 353
+E I SL +GG+AER G + +G RI+ IN+ S+ P + ++LL
Sbjct: 687 SGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLL 739
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 31/147 (21%)
Query: 235 IANLAPAGAAARCGQLNIGDQIIAVNGVSLVAY-----MEFLKANGIEDHSFVKEMDYQ- 288
++NL G AAR QL++GD I AVNG++L + + LK G V E++Y+
Sbjct: 80 VSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVG---ERVVLEVEYEL 136
Query: 289 ---------------EVLNSQE--IFGDELQMFAKKELQKE----ICSLLRGGIAER-GG 326
EV +E FG ++ A + K I + GG A+R G
Sbjct: 137 PPVSVQGSSVMFRTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGT 196
Query: 327 VRVGHRIIEINNQSVVAVPHEKIVNLL 353
++ G R++ ++ ++ H + +++L
Sbjct: 197 IKPGDRLLSVDGIRLLGTTHAEAMSIL 223
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 207 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 264
V V K G LGV + S + +VI + A A RCG L++GD I++++G S+
Sbjct: 253 VEVAKTPGASLGVALTTSVCCNKQ-VIVIDKIKSASIADRCGALHVGDHILSIDGTSM 309
>sp|Q61120|SHC3_MOUSE SHC-transforming protein 3 OS=Mus musculus GN=Shc3 PE=1 SV=2
Length = 474
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 53/193 (27%)
Query: 13 QALPEDP-----VVDTGLGPGTLFRLKFLGSVQV----------------DEDDPKCC-- 49
+ LP P D LGPG + +K+LG ++V E + C
Sbjct: 12 EPLPRPPRGAPHTSDQVLGPGVTYVVKYLGCIEVLRSMRSLDFSTRTQVTREAISRVCEA 71
Query: 50 ---------KRRVKKVMVEEAAPEGETQ-PSTEVDLFISTEKIMVLNTDLKEIMMDHALR 99
KR+ M+ + Q + L IST + + D K+I+ +H +R
Sbjct: 72 VPGAKGALKKRKPPSKMLSSILGKSNLQFAGMSISLTISTASLNLRTPDSKQIIANHHMR 131
Query: 100 TISYIA----DIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE--AQFIAQSI 153
+IS+ + D D V +A+ V++ A CH+ E + AQ + SI
Sbjct: 132 SISFASGGDPDTTDYVAYVAKDP-VNRRA-------------CHILECCDGLAQDVIGSI 177
Query: 154 GQAFQVAYMEFLK 166
GQAF++ + ++L+
Sbjct: 178 GQAFELRFKQYLQ 190
>sp|Q9WV48|SHAN1_RAT SH3 and multiple ankyrin repeat domains protein 1 OS=Rattus
norvegicus GN=Shank1 PE=1 SV=1
Length = 2167
Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 315 SLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLL 353
S+ GG+A R G+R+G +IE+N Q+VV V H ++VN++
Sbjct: 704 SVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMI 742
>sp|D3YZU1|SHAN1_MOUSE SH3 and multiple ankyrin repeat domains protein 1 OS=Mus musculus
GN=Shank1 PE=2 SV=1
Length = 2167
Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 315 SLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLL 353
S+ GG+A R G+R+G +IE+N Q+VV V H ++VN++
Sbjct: 704 SVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMI 742
>sp|O70143|SHC3_RAT SHC-transforming protein 3 OS=Rattus norvegicus GN=Shc3 PE=2 SV=1
Length = 594
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 20/100 (20%)
Query: 73 VDLFISTEKIMVLNTDLKEIMMDHALRTISYIA----DIGDLVVLMARRRFVSQEADEPP 128
+ L IST + + D K+I+ +H +R+IS+ + D D V +A+ V++ A
Sbjct: 225 ISLTISTASLNLRTPDSKQIISNHHMRSISFASGGDPDTTDYVAYVAKDP-VNRRA---- 279
Query: 129 KISRTPKMICHVFESDE--AQFIAQSIGQAFQVAYMEFLK 166
CH+ E + AQ + SIGQAF++ + ++L+
Sbjct: 280 ---------CHILECCDGLAQDVIGSIGQAFELRFKQYLQ 310
>sp|Q9Y566|SHAN1_HUMAN SH3 and multiple ankyrin repeat domains protein 1 OS=Homo sapiens
GN=SHANK1 PE=1 SV=2
Length = 2161
Score = 43.1 bits (100), Expect = 0.004, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 315 SLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLL 353
S+ GG+A R G+R+G +IE+N Q+VV V H ++VN++
Sbjct: 704 SVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMI 742
>sp|Q9H190|SDCB2_HUMAN Syntenin-2 OS=Homo sapiens GN=SDCBP2 PE=2 SV=2
Length = 292
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
Query: 238 LAPAGAAARCGQLNIGDQIIAVNG------VSLVAYMEFLKANGIEDHSFVKEMDYQEVL 291
L A A L GDQ++ ++G S A+ KA+G + V++ +Q +
Sbjct: 134 LVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRPFQRTV 193
Query: 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVN 351
+ + KK +I SL++G A R G+ H + E++ Q+V+ + +KI+
Sbjct: 194 TMHKDSMGHVGFVIKK---GKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIME 250
Query: 352 LLATS 356
+LAT+
Sbjct: 251 ILATA 255
>sp|Q9WTW1|GRIP2_RAT Glutamate receptor-interacting protein 2 OS=Rattus norvegicus
GN=Grip2 PE=1 SV=1
Length = 1043
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 211 KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVAY--- 267
K +G LG+ I SG ++NL P G AAR LN+GD I +VNG+ L
Sbjct: 58 KREGSTLGLTI--SGGTDKDGKPRVSNLRPGGLAARSDLLNVGDYIRSVNGIRLTRLRHD 115
Query: 268 --MEFLKANGIEDHSFVKEMDYQ-------------------EVLNSQEIFGDELQMFAK 306
+ LK G V E++Y+ + FG L+ A
Sbjct: 116 EIITLLKNVG---ERVVLEVEYELPPPAPENNPRIISKTVDVSLYKEGNSFGFVLRGGAH 172
Query: 307 KELQKE---ICSLLR-GGIAER-GGVRVGHRIIEINNQSVVAVPHEKIVNLL 353
++L K + + +R GG A+R G ++VG R++ I+ + H + L
Sbjct: 173 EDLHKSRPLVLTYVRPGGPADREGSLKVGDRLLSIDGIPLHGASHATAIATL 224
Score = 39.3 bits (90), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 20/113 (17%)
Query: 211 KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVAYMEF 270
K G LG+ I SG ++I+ L G A R G +++GD+I+A+N VSL
Sbjct: 662 KRYGGPLGITI--SGTEEPFDPIIISGLTKRGLAERTGAIHVGDRILAINSVSL------ 713
Query: 271 LKANGIEDHSFVKEMDYQEVLNSQEIFGDELQMFAKKELQKEICSLLRGGIAE 323
K E ++ ++ G+ + + KK+L + + G ++E
Sbjct: 714 ------------KGRPLSEAIHLLQVAGETVTLKIKKQLDRPLLPRQSGSLSE 754
Score = 35.8 bits (81), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 207 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVS 263
V + K G LG+ + +G P + I + PA R G L+ GD I+A++G S
Sbjct: 254 VEIAKTPGSALGISLT-TGSHRNKPAITIDRIKPASVVDRSGALHAGDHILAIDGTS 309
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 25/137 (18%)
Query: 240 PAGAAARCGQLNIGDQIIAVNGVSLV-AYMEFLKANG-IEDHSFVK------EMDYQE-V 290
P A RCG L +GD+++A+NG++ ME +AN + D + + E D E V
Sbjct: 494 PDSPAERCGLLQVGDRVLAINGIATEDGTME--EANQLLRDAALARKVVLEIEFDVAESV 551
Query: 291 LNSQEIF--------GDELQMFAKKELQKE-----ICSLLRGGIAER-GGVRVGHRIIEI 336
+ S F G EL + +K I + +G +A R G + G +++ I
Sbjct: 552 IPSSGTFHVKLPKRRGVELGITISSASRKRGEPLIISDIKKGSVAHRTGTLEPGDKLLAI 611
Query: 337 NNQSVVAVPHEKIVNLL 353
+N + P E V +L
Sbjct: 612 DNIRLDHCPMEYAVQIL 628
>sp|Q9HD26|GOPC_HUMAN Golgi-associated PDZ and coiled-coil motif-containing protein
OS=Homo sapiens GN=GOPC PE=1 SV=1
Length = 462
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 205 KEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 264
++V++ K E LG+ I G +P ++I+ + P A RCG L++GD I+AVNGV+L
Sbjct: 287 RKVLLLKEDHEGLGISIT-GGKEHGVP-ILISEIHPGQPADRCGGLHVGDAILAVNGVNL 344
>sp|Q8BH60|GOPC_MOUSE Golgi-associated PDZ and coiled-coil motif-containing protein
OS=Mus musculus GN=Gopc PE=1 SV=1
Length = 463
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 205 KEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 264
++V++ K E LG+ I G +P ++I+ + P A RCG L++GD I+AVNGV+L
Sbjct: 288 RKVLLLKEDHEGLGISIT-GGKEHGVP-ILISEIHPGQPADRCGGLHVGDAILAVNGVNL 345
>sp|Q8VBX6|MPDZ_MOUSE Multiple PDZ domain protein OS=Mus musculus GN=Mpdz PE=1 SV=2
Length = 2055
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 206 EVVVPKAKGEI-LGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 264
E + +KG+ LG+ IV G ++L ++I + GAA + G+L GDQI+ VNG+ L
Sbjct: 1612 ETTIEISKGQTGLGLSIV-GGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDL 1670
Query: 265 VAYMEFLKANGIEDHS-------FVKEMDYQEVLNSQEIFGDELQMFAKKELQKEI---- 313
N + + E Y+E + + F ELQ K L I
Sbjct: 1671 RKATHDEAINVLRQTPQRVRLTLYRDEAPYKEE-DVCDTFTIELQKRPGKGLGLSIVGKR 1729
Query: 314 -------CSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358
+++GGIA+ G + G +I+ +N + V E + LL S+G
Sbjct: 1730 NDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRHATQEAVAALLKCSLG 1782
Score = 38.5 bits (88), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 78/203 (38%), Gaps = 50/203 (24%)
Query: 205 KEVVVPKAKGEILGVVIVESGWGSMLPTV--VIANLAPAGAAARCGQLNIGDQIIAVNGV 262
+ V + K + LG+ I G GS L V IA + P G AA+ +L +GD+I+ + G
Sbjct: 1846 RTVEIKKGPADSLGLSIA-GGVGSPLGDVPIFIAMMHPNGVAAQTQKLRVGDRIVTICGT 1904
Query: 263 SLVAYMEFLKANGIEDHSFVKEMDY-------------QEVLN---------SQEIFGDE 300
S N +++ S E+ QE+ N S IF D+
Sbjct: 1905 STDGMTHTQAVNLMKNASGSIEVQVVAGGDVSVVTGHQQELANPCLAFTGLTSSSIFPDD 1964
Query: 301 LQMFAKKELQKE-------------------------ICSLLRGGIAERGGVRVGHRIIE 335
L K + + +G AE G ++ G +II
Sbjct: 1965 LGPPQSKTITLDRGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAAAEDGRLKRGDQIIA 2024
Query: 336 INNQSVVAVPHEKIVNLLATSVG 358
+N QS+ V HE+ V +L + G
Sbjct: 2025 VNGQSLEGVTHEEAVAILKRTKG 2047
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 185 LNSQEIFGDELQMFAKKELQKEVVVPKAKGEILGVVIVESGWGSM---LPTVVIANLAPA 241
L S IF D+L Q + + + LG IV G+GS LP V A
Sbjct: 1955 LTSSSIFPDDL-----GPPQSKTITLDRGPDGLGFSIV-GGYGSPHGDLPIYVKTVFA-K 2007
Query: 242 GAAARCGQLNIGDQIIAVNGVSL 264
GAAA G+L GDQIIAVNG SL
Sbjct: 2008 GAAAEDGRLKRGDQIIAVNGQSL 2030
Score = 32.0 bits (71), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 232 TVVIANLAPAGAAARCGQLNIGDQIIAVNG 261
+V I + P GAA R G+L I D+++ +NG
Sbjct: 1362 SVFIVGIDPTGAAGRDGRLQIADELLEING 1391
>sp|O55164|MPDZ_RAT Multiple PDZ domain protein OS=Rattus norvegicus GN=Mpdz PE=1 SV=1
Length = 2054
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 206 EVVVPKAKGEI-LGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 264
E + +KG+ LG+ IV G ++L ++I + GAA + G+L GDQI+ VNG+ L
Sbjct: 1611 ETTIEISKGQTGLGLSIV-GGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDL 1669
Query: 265 VAYMEFLKANGIEDHS-------FVKEMDYQEVLNSQEIFGDELQMFAKKELQKEI---- 313
N + + E Y+E + + F ELQ K L I
Sbjct: 1670 RKATHDEAINVLRQTPQRVRLTLYRDEAPYKEE-DVCDTFTVELQKRPGKGLGLSIVGKR 1728
Query: 314 -------CSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358
+++GGIA+ G + G +I+ +N + V E + LL S+G
Sbjct: 1729 NDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLG 1781
Score = 38.5 bits (88), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 78/203 (38%), Gaps = 50/203 (24%)
Query: 205 KEVVVPKAKGEILGVVIVESGWGSMLPTV--VIANLAPAGAAARCGQLNIGDQIIAVNGV 262
+ V + K + LG+ I G GS L V IA + P G AA+ +L +GD+I+ + G
Sbjct: 1845 RTVEIKKGPADALGLSIA-GGVGSPLGDVPIFIAMMHPNGVAAQTQKLRVGDRIVTICGT 1903
Query: 263 SLVAYMEFLKANGIEDHSFVKEMDY-------------QEVLN---------SQEIFGDE 300
S N +++ S E+ QE+ N S IF D+
Sbjct: 1904 STDGMTHTQAVNLMKNASGSIEVQVVAGGDVSVVTGHQQELANPCLAFTGLTSSTIFPDD 1963
Query: 301 LQMFAKKELQKE-------------------------ICSLLRGGIAERGGVRVGHRIIE 335
L K + + +G AE G ++ G +II
Sbjct: 1964 LGPPQSKTITLDRGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAAAEDGRLKRGDQIIA 2023
Query: 336 INNQSVVAVPHEKIVNLLATSVG 358
+N QS+ V HE+ V +L + G
Sbjct: 2024 VNGQSLEGVTHEEAVAILKRTKG 2046
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 185 LNSQEIFGDELQMFAKKELQKEVVVPKAKGEILGVVIVESGWGSM---LPTVVIANLAPA 241
L S IF D+L Q + + + LG IV G+GS LP V A
Sbjct: 1954 LTSSTIFPDDL-----GPPQSKTITLDRGPDGLGFSIV-GGYGSPHGDLPIYVKTVFA-K 2006
Query: 242 GAAARCGQLNIGDQIIAVNGVSL 264
GAAA G+L GDQIIAVNG SL
Sbjct: 2007 GAAAEDGRLKRGDQIIAVNGQSL 2029
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 318 RGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356
RGG A+ G ++ G RI+ ++++ V P EK ++LL T+
Sbjct: 1501 RGGAAKDGRLKPGDRILAVDDELVAGCPIEKFISLLKTA 1539
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 232 TVVIANLAPAGAAARCGQLNIGDQIIAVNG 261
+V I + P GAA R G+L I D+++ +NG
Sbjct: 1361 SVFIVGIDPTGAAGRDGRLQIADELLEING 1390
>sp|Q96L92|SNX27_HUMAN Sorting nexin-27 OS=Homo sapiens GN=SNX27 PE=1 SV=2
Length = 541
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 311 KEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLL 353
+ + ++L GG A+R GVR G RI+E+N+ +V H+++V+L+
Sbjct: 79 QHVSAVLPGGAADRAGVRKGDRILEVNHVNVEGATHKQVVDLI 121
>sp|Q9QX74|SHAN2_RAT SH3 and multiple ankyrin repeat domains protein 2 OS=Rattus
norvegicus GN=Shank2 PE=1 SV=2
Length = 1474
Score = 41.2 bits (95), Expect = 0.011, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 29/39 (74%)
Query: 315 SLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLL 353
S+ GG+A + G+R G +IE+NN++VV V H ++VN++
Sbjct: 289 SVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVNMI 327
>sp|Q80Z38|SHAN2_MOUSE SH3 and multiple ankyrin repeat domains protein 2 OS=Mus musculus
GN=Shank2 PE=1 SV=2
Length = 1476
Score = 41.2 bits (95), Expect = 0.011, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 29/39 (74%)
Query: 315 SLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLL 353
S+ GG+A + G+R G +IE+NN++VV V H ++VN++
Sbjct: 288 SVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVNMI 326
>sp|Q4H4B6|SCRIB_DANRE Protein scribble homolog OS=Danio rerio GN=scrib PE=1 SV=1
Length = 1724
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 30/180 (16%)
Query: 205 KEVVVPKAKGEILGVVIV------ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIA 258
+EV + KA G LG+ IV +G P V I+ + P G A++ G L +GD+I+
Sbjct: 1004 EEVTLIKAGGP-LGLSIVGGSDHASHPFGINEPGVFISKVIPNGLASQSG-LRVGDRILE 1061
Query: 259 VNGVSL--VAYMEFLKA---NGIEDHSFVKE----MDYQEVL---NSQEIFGDELQMFAK 306
VN + L + E ++A N E V+ QE++ E G ++ AK
Sbjct: 1062 VNSIDLRHATHQEAVRALLSNKQEIRMLVRRDPSPPGMQEIVIHKQPGEKLGISIRGGAK 1121
Query: 307 KELQKE---------ICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356
I + G A R G +RVG RI+E+ N S++ + H + V +L S
Sbjct: 1122 GHAGNPFDPTDEGIFISKVSSNGAAARDGRLRVGMRILEVGNNSLLGMTHTEAVRVLRAS 1181
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 20/128 (15%)
Query: 164 FLKANGIEDHSFVKEMDYQEVLNSQEIFGDELQMFAKKELQ----KEVVVPKAKGEILGV 219
L+ N I+ ++ +QE + + E++M +++ +E+V+ K GE LG+
Sbjct: 1059 ILEVNSID----LRHATHQEAVRALLSNKQEIRMLVRRDPSPPGMQEIVIHKQPGEKLGI 1114
Query: 220 VIVESGWG----SMLPT---VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVAY----- 267
I G PT + I+ ++ GAAAR G+L +G +I+ V SL+
Sbjct: 1115 SIRGGAKGHAGNPFDPTDEGIFISKVSSNGAAARDGRLRVGMRILEVGNNSLLGMTHTEA 1174
Query: 268 MEFLKANG 275
+ L+A+G
Sbjct: 1175 VRVLRASG 1182
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 233 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV 265
+ I+ +A GAA R L +GD++I++NGV +
Sbjct: 897 IFISRIAEGGAAHRDNILQVGDRVISINGVDMT 929
Score = 32.3 bits (72), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 28/47 (59%)
Query: 313 ICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVGE 359
I ++ G+A + G+RVG RI+E+N+ + H++ V L ++ E
Sbjct: 1039 ISKVIPNGLASQSGLRVGDRILEVNSIDLRHATHQEAVRALLSNKQE 1085
>sp|Q9UPX8|SHAN2_HUMAN SH3 and multiple ankyrin repeat domains protein 2 OS=Homo sapiens
GN=SHANK2 PE=1 SV=3
Length = 1470
Score = 41.2 bits (95), Expect = 0.012, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 29/39 (74%)
Query: 315 SLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLL 353
S+ GG+A + G+R G +IE+NN++VV V H ++VN++
Sbjct: 288 SVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVNMI 326
>sp|Q86UL8|MAGI2_HUMAN Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 2 OS=Homo sapiens GN=MAGI2 PE=1 SV=3
Length = 1455
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 170 IEDHSFVKEMDYQEVLNSQEIF----GDELQMFAKKELQ-KEVVVPKAKGEILGVVIV-- 222
+ H DY NS + FA LQ +VV+ + + E G VI+
Sbjct: 879 VSTHHSSPRSDYATYTNSNHAAPSSNASPPEGFASHSLQTSDVVIHRKENEGFGFVIISS 938
Query: 223 ----ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV 265
ESG +P I + A RC +L +GD+I+AVNG S++
Sbjct: 939 LNRPESGSTITVPHK-IGRIIDGSPADRCAKLKVGDRILAVNGQSII 984
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 107/308 (34%), Gaps = 87/308 (28%)
Query: 132 RTPKMICHVFE---SDEAQFIAQSIGQ--AFQVAYMEFLKANGIEDHSFVKEMDYQEVLN 186
+TPK I +E S + A +I Q F A + E K Y+
Sbjct: 689 KTPKPIMDRWENQGSPQTSLSAPAIPQNLPFPPALHRSSFPDSTEAFDPRKPDPYELYEK 748
Query: 187 SQEIFGDELQMFAKKELQKEVVVPKAKGEILGVVIVESGWGSML--------PTVVIANL 238
S+ I+ Q+ + + + P K + + +ESG+G + P ++ A +
Sbjct: 749 SRAIYESRQQVPPRTSFRMDSSGPDYKELDVHLRRMESGFGFRILGGDEPGQPILIGAVI 808
Query: 239 APAGAAARCGQLNIGDQIIAVNGVSL--------VAYMEFLKANG--------------- 275
A G+A R G+L+ GD+++ V+G+ + + M NG
Sbjct: 809 A-MGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRKVLCGGE 867
Query: 276 -----------IEDHSFVKEMDYQEVLNSQEIF----GDELQMFAKKELQKE-------- 312
+ H DY NS + FA LQ
Sbjct: 868 PCPENGRSPGSVSTHHSSPRSDYATYTNSNHAAPSSNASPPEGFASHSLQTSDVVIHRKE 927
Query: 313 --------ICSLLR------------------GGIAER-GGVRVGHRIIEINNQSVVAVP 345
I SL R G A+R ++VG RI+ +N QS++ +P
Sbjct: 928 NEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMP 987
Query: 346 HEKIVNLL 353
H IV L+
Sbjct: 988 HADIVKLI 995
Score = 32.3 bits (72), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 233 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSL-----VAYMEFLKANG 275
+ + LA G A R G++ +GDQII +NG S +E +K+ G
Sbjct: 1171 LYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGG 1218
>sp|Q8K4V4|SNX27_RAT Sorting nexin-27 OS=Rattus norvegicus GN=Snx27 PE=1 SV=2
Length = 539
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 311 KEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLL 353
+ + ++L GG A+R GVR G RI+E+N +V H+++V+L+
Sbjct: 77 QHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLI 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,283,807
Number of Sequences: 539616
Number of extensions: 5184908
Number of successful extensions: 15259
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 14655
Number of HSP's gapped (non-prelim): 604
length of query: 359
length of database: 191,569,459
effective HSP length: 119
effective length of query: 240
effective length of database: 127,355,155
effective search space: 30565237200
effective search space used: 30565237200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)