Query psy5022
Match_columns 359
No_of_seqs 397 out of 2140
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 23:51:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5022.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5022hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3suz_A Amyloid beta A4 precurs 100.0 1.5E-59 5.2E-64 455.0 19.0 328 23-358 3-364 (388)
2 4dbb_A Amyloid beta A4 precurs 100.0 6.6E-37 2.3E-41 260.5 14.5 158 22-191 2-162 (162)
3 1aqc_A X11; PTB domain; 2.30A 100.0 2.9E-35 9.9E-40 252.6 15.3 150 23-172 2-172 (172)
4 2ela_A Adapter protein contain 100.0 1.4E-33 4.7E-38 242.5 13.8 156 7-169 7-164 (175)
5 2ej8_A DCC-interacting protein 100.0 1.7E-32 5.8E-37 233.1 12.7 140 23-169 10-151 (160)
6 1ntv_A Disabled homolog 1; bet 100.0 7.7E-31 2.6E-35 221.0 12.0 133 20-166 4-145 (152)
7 1p3r_A Disabled homolog 2; PTB 100.0 7.7E-30 2.6E-34 216.6 14.7 129 26-168 14-146 (160)
8 3so6_A LDL receptor adaptor pr 100.0 2.8E-29 9.4E-34 208.4 14.1 130 26-168 1-134 (137)
9 3dxe_A Amyloid beta A4 protein 100.0 1.8E-29 6.1E-34 207.3 11.2 122 30-168 9-132 (140)
10 1n3h_A SHC transforming protei 100.0 4.5E-30 1.6E-34 226.1 6.1 134 22-166 42-207 (207)
11 2ysz_A Amyloid beta A4 precurs 100.0 1.1E-28 3.8E-33 210.9 11.4 137 12-170 4-143 (185)
12 1wgu_A APBB2, amyloid beta (A4 100.0 2.4E-28 8.3E-33 199.9 12.1 129 12-162 4-135 (136)
13 3f0w_A NUMB-R, NUMB-like prote 100.0 3.4E-28 1.2E-32 208.3 11.7 131 21-167 33-166 (168)
14 2dyq_A Amyloid beta A4 precurs 99.9 6.7E-28 2.3E-32 197.7 11.0 121 29-166 16-143 (144)
15 2yt0_A Amyloid beta A4 protein 99.9 7.7E-24 2.6E-28 179.6 11.9 116 25-157 57-176 (176)
16 3gsl_A Disks large homolog 4; 99.9 5.1E-21 1.7E-25 167.4 18.2 154 202-356 4-178 (196)
17 3r0h_A INAD, inactivation-NO-a 99.8 5.6E-20 1.9E-24 162.4 18.5 155 198-357 13-185 (206)
18 1p1d_A PDZ45, glutamate recept 99.8 1.6E-19 5.5E-24 158.4 18.1 153 204-356 7-183 (196)
19 2qt5_A Glutamate receptor-inte 99.8 6.6E-19 2.3E-23 154.9 18.6 149 204-355 8-182 (200)
20 1w9e_A Syntenin 1; cell adhesi 99.8 1.4E-17 4.7E-22 142.2 18.6 140 203-355 4-153 (166)
21 1wvh_A Tensin, tensin1; beta s 99.7 3.3E-17 1.1E-21 132.1 12.8 117 28-153 1-129 (134)
22 2xkx_A Disks large homolog 4; 99.7 4.3E-17 1.5E-21 169.3 17.4 152 203-356 59-232 (721)
23 3d8d_A Amyloid beta A4 precurs 99.7 2.3E-16 8E-21 128.6 13.7 121 29-159 3-136 (148)
24 3hqc_A Tensin-like C1 domain-c 99.6 2.1E-16 7.1E-21 130.4 7.8 123 23-154 8-141 (157)
25 2xkx_A Disks large homolog 4; 99.6 4.9E-15 1.7E-19 153.9 17.7 152 204-357 155-380 (721)
26 3rle_A Golgi reassembly-stacki 99.6 2.7E-15 9.3E-20 132.8 12.1 124 231-358 16-159 (209)
27 4a8c_A Periplasmic PH-dependen 99.6 3.3E-14 1.1E-18 139.4 14.2 124 231-357 263-409 (436)
28 3pv2_A DEGQ; trypsin fold, PDZ 99.5 5.6E-14 1.9E-18 138.2 14.1 137 216-355 259-430 (451)
29 1ky9_A Protease DO, DEGP, HTRA 99.3 1.9E-13 6.5E-18 134.3 1.5 123 231-357 286-429 (448)
30 1r6j_A Syntenin 1; PDZ, membra 99.3 2.9E-12 1E-16 95.6 7.0 56 294-356 15-70 (82)
31 3gge_A PDZ domain-containing p 99.3 1.5E-11 5.2E-16 93.8 9.7 78 202-284 4-89 (95)
32 3gge_A PDZ domain-containing p 99.3 2.2E-11 7.4E-16 92.9 9.0 67 290-358 11-78 (95)
33 4dx8_A Integrin beta-1-binding 99.3 8.9E-11 3.1E-15 94.9 12.8 120 29-161 15-149 (154)
34 2yt7_A Amyloid beta A4 precurs 99.2 5.9E-11 2E-15 92.3 11.3 85 200-284 6-98 (101)
35 2i04_A Membrane-associated gua 99.2 2.4E-11 8.2E-16 91.3 8.6 66 292-357 8-74 (85)
36 2pa1_A PDZ and LIM domain prot 99.2 3.7E-11 1.3E-15 90.7 8.9 66 292-357 9-74 (87)
37 2uzc_A Human pdlim5, PDZ and L 99.2 4.9E-11 1.7E-15 90.2 9.1 65 292-356 10-74 (88)
38 1rgw_A ZAsp protein; PDZ, cyph 99.2 4.3E-11 1.5E-15 89.9 8.7 65 292-356 8-72 (85)
39 2q3g_A PDZ and LIM domain prot 99.2 3.8E-11 1.3E-15 91.1 8.2 64 293-356 11-74 (89)
40 3b76_A E3 ubiquitin-protein li 99.2 1.2E-10 4.3E-15 93.2 11.5 93 193-285 14-113 (118)
41 1g9o_A NHE-RF; PDZ domain, com 99.2 4.8E-11 1.6E-15 90.9 8.5 67 291-358 10-76 (91)
42 2q9v_A Membrane-associated gua 99.2 4.2E-11 1.4E-15 91.0 8.0 66 292-357 10-76 (90)
43 4fln_A Protease DO-like 2, chl 99.2 1.3E-10 4.5E-15 115.6 13.6 125 231-359 277-463 (539)
44 2pkt_A PDZ and LIM domain prot 99.2 6.7E-11 2.3E-15 90.1 9.0 64 292-355 10-73 (91)
45 1ufx_A KIAA1526 protein; PDZ d 99.2 2.8E-11 9.4E-16 94.6 6.7 66 291-356 13-80 (103)
46 1uep_A Membrane associated gua 99.2 5.3E-11 1.8E-15 92.9 7.8 66 292-357 17-83 (103)
47 1i16_A Interleukin 16, LCF; cy 99.2 2.6E-11 8.9E-16 98.9 6.2 68 291-358 36-107 (130)
48 4e34_A Golgi-associated PDZ an 99.2 5.6E-11 1.9E-15 89.7 7.6 64 293-356 12-76 (87)
49 1r6j_A Syntenin 1; PDZ, membra 99.2 1E-10 3.4E-15 87.3 8.6 72 203-284 4-81 (82)
50 2dc2_A GOPC, golgi associated 99.2 5.6E-11 1.9E-15 92.8 7.5 67 292-358 18-85 (103)
51 3o46_A Maguk P55 subfamily mem 99.2 7.9E-11 2.7E-15 90.1 7.7 66 292-358 12-78 (93)
52 2d92_A INAD-like protein; PDZ 99.2 4.6E-11 1.6E-15 94.1 6.5 67 292-358 23-94 (108)
53 2he4_A Na(+)/H(+) exchange reg 99.1 1.2E-10 4.1E-15 88.5 8.1 65 291-356 11-75 (90)
54 1wi4_A Synip, syntaxin binding 99.1 1E-10 3.5E-15 92.3 7.9 64 294-357 24-90 (109)
55 1ueq_A Membrane associated gua 99.1 1.7E-10 5.9E-15 93.0 9.2 66 292-357 27-93 (123)
56 3e17_A Tight junction protein 99.1 1E-10 3.6E-15 88.6 7.3 60 293-358 11-71 (88)
57 2v90_A PDZ domain-containing p 99.1 1.3E-10 4.6E-15 89.3 8.1 66 291-356 10-77 (96)
58 4amh_A Disks large homolog 1; 99.1 1.1E-10 3.9E-15 91.6 7.7 65 292-356 10-80 (106)
59 1kwa_A Hcask/LIN-2 protein; PD 99.1 9.6E-11 3.3E-15 88.8 7.0 63 294-358 12-75 (88)
60 3r68_A Na(+)/H(+) exchange reg 99.1 8.4E-11 2.9E-15 90.2 6.7 67 291-358 12-78 (95)
61 2ego_A General receptor for ph 99.1 1.5E-10 5.1E-15 89.1 8.0 63 294-356 15-84 (96)
62 3cbz_A Dishevelled-2; PDZ doma 99.1 1.2E-10 4.1E-15 91.8 7.5 64 293-356 15-81 (108)
63 1n7e_A AMPA receptor interacti 99.1 2E-10 6.9E-15 88.5 8.5 64 292-355 13-77 (97)
64 1qav_A Alpha-1 syntrophin (res 99.1 1.5E-10 5E-15 88.0 7.5 64 293-356 14-78 (90)
65 3hpk_A Protein interacting wit 99.1 1.3E-10 4.6E-15 93.9 7.7 66 293-358 29-95 (125)
66 2dkr_A LIN-7 homolog B; LIN-7B 99.1 1.8E-10 6.2E-15 88.0 7.9 66 291-356 12-78 (93)
67 2eeg_A PDZ and LIM domain prot 99.1 1.9E-10 6.5E-15 88.1 8.1 64 292-355 15-78 (94)
68 2kpk_A Membrane-associated gua 99.1 1.2E-10 4.2E-15 94.7 7.1 66 292-357 26-92 (129)
69 3b76_A E3 ubiquitin-protein li 99.1 1.3E-10 4.3E-15 93.2 7.0 64 294-357 35-102 (118)
70 2jil_A GRIP1 protein, glutamat 99.1 2.1E-10 7.2E-15 88.3 8.0 64 292-355 11-79 (97)
71 2jxo_A Ezrin-radixin-moesin-bi 99.1 2E-10 6.9E-15 88.6 7.9 67 291-358 16-82 (98)
72 2fne_A Multiple PDZ domain pro 99.1 1.5E-10 5.3E-15 92.5 7.4 68 291-358 32-103 (117)
73 2vsv_A Rhophilin-2; scaffold p 99.1 3E-10 1E-14 89.5 8.9 63 292-358 31-93 (109)
74 2qg1_A Multiple PDZ domain pro 99.1 6E-10 2E-14 84.9 10.3 81 203-286 4-90 (92)
75 2ejy_A 55 kDa erythrocyte memb 99.1 4.1E-10 1.4E-14 86.9 9.4 79 202-284 11-95 (97)
76 1kwa_A Hcask/LIN-2 protein; PD 99.1 4.7E-10 1.6E-14 84.9 9.6 76 204-284 2-84 (88)
77 2r4h_A Membrane-associated gua 99.1 3.4E-10 1.2E-14 89.7 9.1 64 292-355 32-96 (112)
78 1ihj_A INAD; intermolecular di 99.1 2.5E-10 8.4E-15 88.1 8.0 63 293-355 15-84 (98)
79 2vsp_A PDZ domain-containing p 99.1 1.1E-10 3.8E-15 88.9 5.8 65 291-356 10-74 (91)
80 2iwo_A Multiple PDZ domain pro 99.1 1.3E-10 4.3E-15 93.4 6.4 64 295-358 36-103 (120)
81 1d5g_A Human phosphatase HPTP1 99.1 4.3E-10 1.5E-14 86.4 9.1 64 292-355 13-80 (96)
82 3nfk_A Tyrosine-protein phosph 99.1 2.8E-10 9.6E-15 89.3 8.2 63 295-357 29-93 (107)
83 3cbz_A Dishevelled-2; PDZ doma 99.1 2.2E-10 7.4E-15 90.3 7.5 82 203-284 5-95 (108)
84 2byg_A Channel associated prot 99.1 3.7E-10 1.3E-14 90.3 8.5 65 292-356 32-102 (117)
85 2awx_A Synapse associated prot 99.1 3.6E-10 1.2E-14 88.4 8.3 65 292-356 11-81 (105)
86 1wfg_A Regulating synaptic mem 99.1 3.1E-10 1.1E-14 92.6 8.2 64 293-356 46-113 (131)
87 2vwr_A Ligand of NUMB protein 99.1 8.8E-10 3E-14 84.5 10.3 80 203-285 3-89 (95)
88 2byg_A Channel associated prot 99.1 7E-10 2.4E-14 88.6 10.1 88 195-284 16-113 (117)
89 2f5y_A Regulator of G-protein 99.1 4.2E-10 1.4E-14 85.7 8.4 61 292-356 11-71 (91)
90 2i1n_A Discs, large homolog 3; 99.1 4.2E-10 1.4E-14 87.5 8.5 65 292-356 12-82 (102)
91 2jik_A Synaptojanin-2 binding 99.1 4.1E-10 1.4E-14 87.4 8.4 65 292-356 15-85 (101)
92 1uhp_A Hypothetical protein KI 99.1 5.1E-10 1.8E-14 87.9 9.1 65 292-356 16-89 (107)
93 3kzd_A TIAM-1, T-lymphoma inva 99.1 2.6E-10 8.8E-15 87.2 7.1 62 295-356 20-82 (94)
94 2fe5_A Presynaptic protein SAP 99.1 4E-10 1.4E-14 86.2 8.2 65 292-356 11-81 (94)
95 1wi2_A Riken cDNA 2700099C19; 99.1 3.9E-10 1.3E-14 88.1 8.2 62 294-355 26-87 (104)
96 1wf7_A Enigma homologue protei 99.1 2.4E-10 8.1E-15 89.1 6.9 64 293-356 13-76 (103)
97 1vb7_A PDZ and LIM domain 2; P 99.1 1.4E-10 4.7E-15 88.9 5.3 65 292-356 13-77 (94)
98 1wi4_A Synip, syntaxin binding 99.1 8.4E-10 2.9E-14 87.0 9.8 83 200-284 12-104 (109)
99 3l4f_D SH3 and multiple ankyri 99.0 3.8E-10 1.3E-14 92.2 8.0 64 293-356 37-112 (132)
100 2iwo_A Multiple PDZ domain pro 99.0 4.2E-10 1.4E-14 90.4 8.0 87 198-285 19-113 (120)
101 1wha_A KIAA0147 protein, scrib 99.0 3E-10 1E-14 88.9 7.0 65 292-356 15-86 (105)
102 2opg_A Multiple PDZ domain pro 99.0 5.4E-10 1.9E-14 86.2 8.3 65 292-356 12-78 (98)
103 1x6d_A Interleukin-16; PDZ dom 99.0 2.5E-10 8.5E-15 91.5 6.5 66 293-358 25-92 (119)
104 2cs5_A Tyrosine-protein phosph 99.0 3.3E-10 1.1E-14 90.7 7.1 64 294-357 26-91 (119)
105 1q3o_A Shank1; PDZ, GKAP, pept 99.0 6.8E-10 2.3E-14 87.5 8.7 65 292-356 16-92 (109)
106 3sfj_A TAX1-binding protein 3; 99.0 4.1E-10 1.4E-14 87.8 7.4 64 295-358 19-94 (104)
107 1ujd_A KIAA0559 protein; PDZ d 99.0 3.7E-10 1.3E-14 90.2 7.3 63 294-356 29-97 (117)
108 1ihj_A INAD; intermolecular di 99.0 8E-10 2.7E-14 85.2 8.9 83 202-284 4-96 (98)
109 1wi2_A Riken cDNA 2700099C19; 99.0 7.3E-10 2.5E-14 86.5 8.7 81 202-285 14-99 (104)
110 2awx_A Synapse associated prot 99.0 1.6E-09 5.6E-14 84.6 10.7 83 202-285 2-93 (105)
111 1m5z_A GRIP, AMPA receptor int 99.0 2E-09 6.9E-14 81.7 10.7 78 203-284 6-90 (91)
112 2q9v_A Membrane-associated gua 99.0 1E-09 3.5E-14 83.2 9.0 78 204-284 3-88 (90)
113 2eno_A Synaptojanin-2-binding 99.0 8.6E-10 3E-14 88.4 9.0 66 291-356 24-95 (120)
114 1v6b_A Harmonin isoform A1; st 99.0 3.3E-10 1.1E-14 90.7 6.5 63 294-356 27-91 (118)
115 2kv8_A RGS12, regulator of G-p 99.0 2.8E-10 9.6E-15 85.0 5.6 61 292-356 10-70 (83)
116 1v5l_A PDZ and LIM domain 3; a 99.0 1.9E-10 6.4E-15 89.8 4.7 66 291-356 11-76 (103)
117 2djt_A Unnamed protein product 99.0 6.8E-10 2.3E-14 86.6 7.8 64 292-355 19-85 (104)
118 3l4f_D SH3 and multiple ankyri 99.0 1.9E-09 6.5E-14 88.0 10.7 81 203-284 27-123 (132)
119 2ehr_A INAD-like protein; PDZ 99.0 1.5E-09 5E-14 86.7 9.8 83 202-284 14-109 (117)
120 2ego_A General receptor for ph 99.0 1.7E-09 5.7E-14 83.2 9.7 82 202-284 3-95 (96)
121 2ejy_A 55 kDa erythrocyte memb 99.0 4E-10 1.4E-14 86.9 6.2 62 293-356 22-84 (97)
122 2v90_A PDZ domain-containing p 99.0 1.3E-09 4.4E-14 83.7 9.0 80 203-285 3-89 (96)
123 2qg1_A Multiple PDZ domain pro 99.0 9.2E-10 3.1E-14 83.8 8.1 63 293-356 14-77 (92)
124 2dls_A PDZ-rhogef, RHO guanine 99.0 1.6E-09 5.5E-14 82.8 9.4 76 202-285 7-87 (93)
125 2r4h_A Membrane-associated gua 99.0 1.8E-09 6.2E-14 85.5 10.0 86 196-284 17-108 (112)
126 2w4f_A Protein LAP4; structura 99.0 1.1E-09 3.8E-14 84.2 8.6 64 292-355 11-80 (97)
127 1wg6_A Hypothetical protein (r 99.0 2.7E-10 9.3E-15 92.4 5.2 65 292-356 34-103 (127)
128 1qav_A Alpha-1 syntrophin (res 99.0 1.5E-09 5.2E-14 82.3 9.1 78 203-283 4-88 (90)
129 2fe5_A Presynaptic protein SAP 99.0 3.3E-09 1.1E-13 81.0 11.1 80 203-284 3-92 (94)
130 3qik_A Phosphatidylinositol 3, 99.0 9.1E-10 3.1E-14 84.8 7.8 63 291-356 24-86 (101)
131 2jre_A C60-1 PDZ domain peptid 99.0 7.4E-10 2.5E-14 87.0 7.5 64 292-355 22-91 (108)
132 1mfg_A ERB-B2 interacting prot 99.0 1.5E-09 5.3E-14 83.1 9.1 60 295-355 13-80 (95)
133 3qe1_A Sorting nexin-27, G pro 99.0 1.1E-09 3.7E-14 85.9 8.4 65 292-356 14-90 (107)
134 3khf_A Microtubule-associated 99.0 7.6E-10 2.6E-14 85.5 7.4 65 291-355 9-80 (99)
135 2gzv_A PRKCA-binding protein; 99.0 7.7E-10 2.6E-14 88.0 7.5 65 294-358 35-100 (114)
136 3o46_A Maguk P55 subfamily mem 99.0 2E-09 6.8E-14 82.2 9.6 79 202-284 3-87 (93)
137 2eeh_A PDZ domain-containing p 99.0 1.4E-09 4.8E-14 84.3 8.8 81 202-285 9-94 (100)
138 2koj_A Partitioning defective 99.0 1.1E-09 3.9E-14 86.4 8.4 65 292-356 19-87 (111)
139 2z17_A Pleckstrin homology SEC 99.0 5.3E-10 1.8E-14 87.3 6.4 64 294-357 26-96 (104)
140 3axa_A Afadin, nectin-3, prote 99.0 1.4E-09 4.7E-14 85.2 8.7 65 292-356 18-86 (106)
141 2db5_A INAD-like protein; PDZ 99.0 1.2E-09 4.1E-14 88.6 8.6 87 199-285 21-115 (128)
142 2he4_A Na(+)/H(+) exchange reg 99.0 3E-09 1E-13 80.6 10.3 78 203-285 4-87 (90)
143 2i1n_A Discs, large homolog 3; 99.0 2.4E-09 8.2E-14 83.2 10.0 82 203-285 4-94 (102)
144 1uew_A Membrane associated gua 99.0 1E-09 3.6E-14 87.1 7.9 63 293-355 20-90 (114)
145 2vwr_A Ligand of NUMB protein 99.0 1.1E-09 3.9E-14 83.8 7.8 62 294-356 15-77 (95)
146 2o2t_A Multiple PDZ domain pro 99.0 8.5E-10 2.9E-14 88.0 7.3 87 199-285 16-110 (117)
147 1wfv_A Membrane associated gua 99.0 3.2E-10 1.1E-14 88.3 4.7 64 292-355 19-83 (103)
148 2h2b_A Tight junction protein 99.0 3.1E-09 1.1E-13 83.2 10.4 81 203-285 7-97 (107)
149 1v62_A KIAA1719 protein; struc 99.0 1E-09 3.5E-14 87.6 7.6 62 294-355 26-89 (117)
150 3ngh_A PDZ domain-containing p 99.0 1.2E-09 4.1E-14 85.5 7.9 61 294-355 12-72 (106)
151 2jik_A Synaptojanin-2 binding 99.0 3.8E-09 1.3E-13 81.8 10.7 83 202-285 6-97 (101)
152 2la8_A Inactivation-NO-after-p 99.0 1.5E-09 5.3E-14 85.1 8.4 75 205-284 4-84 (106)
153 1y7n_A Amyloid beta A4 precurs 99.0 1.1E-09 3.7E-14 83.3 7.3 57 293-356 22-78 (90)
154 2fne_A Multiple PDZ domain pro 99.0 1.4E-09 4.9E-14 86.8 8.3 83 202-285 24-113 (117)
155 2i04_A Membrane-associated gua 99.0 3.2E-09 1.1E-13 79.5 9.8 75 206-283 3-85 (85)
156 2d92_A INAD-like protein; PDZ 99.0 1.8E-09 6.2E-14 84.9 8.8 82 202-284 14-104 (108)
157 1v62_A KIAA1719 protein; struc 99.0 1.6E-09 5.4E-14 86.6 8.5 84 202-286 14-103 (117)
158 3i4w_A Disks large homolog 4; 99.0 1.3E-09 4.4E-14 84.9 7.8 65 291-356 18-83 (104)
159 1wfg_A Regulating synaptic mem 99.0 7E-10 2.4E-14 90.5 6.4 78 207-284 40-126 (131)
160 2dls_A PDZ-rhogef, RHO guanine 99.0 1.9E-09 6.5E-14 82.4 8.4 59 292-354 16-74 (93)
161 3i4w_A Disks large homolog 4; 99.0 3.3E-09 1.1E-13 82.5 10.0 79 202-284 10-94 (104)
162 1d5g_A Human phosphatase HPTP1 99.0 4.6E-09 1.6E-13 80.5 10.6 82 202-284 4-92 (96)
163 2la8_A Inactivation-NO-after-p 99.0 9.4E-10 3.2E-14 86.3 6.7 64 292-358 11-75 (106)
164 1m5z_A GRIP, AMPA receptor int 99.0 1.5E-09 5E-14 82.5 7.5 61 295-356 19-79 (91)
165 2daz_A INAD-like protein; PDZ 99.0 1E-09 3.5E-14 88.5 7.0 66 292-357 33-100 (124)
166 3soe_A Membrane-associated gua 99.0 2E-09 6.9E-14 85.0 8.3 62 291-357 19-80 (113)
167 2w4f_A Protein LAP4; structura 99.0 5.2E-09 1.8E-13 80.4 10.5 79 205-285 5-93 (97)
168 2dc2_A GOPC, golgi associated 99.0 2.3E-09 7.8E-14 83.6 8.6 80 202-284 8-94 (103)
169 2ehr_A INAD-like protein; PDZ 99.0 1.6E-09 5.4E-14 86.5 7.8 63 294-356 26-98 (117)
170 2d90_A PDZ domain containing p 99.0 1.4E-09 4.9E-14 84.5 7.4 64 292-356 14-77 (102)
171 4e34_A Golgi-associated PDZ an 98.9 2.9E-09 9.9E-14 80.1 8.8 76 204-282 3-85 (87)
172 3tsv_A Tight junction protein 98.9 1.9E-09 6.6E-14 87.0 8.3 62 292-355 36-97 (124)
173 1wf8_A Neurabin-I; PDZ domain, 98.9 1.2E-09 4.1E-14 85.7 6.8 65 292-356 17-88 (107)
174 2g5m_B Neurabin-2; spinophilin 98.9 1.1E-09 3.9E-14 86.7 6.7 65 292-356 12-83 (113)
175 1uf1_A KIAA1526 protein; PDZ d 98.9 2.3E-09 7.8E-14 87.0 8.7 62 295-356 32-93 (128)
176 2vsp_A PDZ domain-containing p 98.9 9.3E-10 3.2E-14 83.7 6.0 78 203-285 3-86 (91)
177 2lob_A Golgi-associated PDZ an 98.5 8.3E-11 2.8E-15 93.3 0.0 65 293-357 37-102 (112)
178 3bpu_A Membrane-associated gua 98.9 2.7E-09 9.1E-14 80.6 8.4 62 291-355 10-71 (88)
179 2qkv_A Inactivation-NO-after-p 98.9 1.5E-09 5E-14 83.5 7.0 62 293-357 18-80 (96)
180 2e7k_A Maguk P55 subfamily mem 98.9 2.1E-09 7.3E-14 81.8 7.9 60 293-356 16-76 (91)
181 2yt7_A Amyloid beta A4 precurs 98.9 2.2E-09 7.6E-14 83.3 8.1 63 294-356 20-85 (101)
182 1nf3_C PAR-6B; semi-CRIB motif 98.9 1.5E-09 5E-14 88.2 7.3 64 294-357 41-114 (128)
183 2e7k_A Maguk P55 subfamily mem 98.9 1.5E-09 5.2E-14 82.6 7.0 78 202-284 5-87 (91)
184 3egg_C Spinophilin; PP1, serin 98.9 1.6E-09 5.5E-14 92.3 7.9 65 292-356 88-159 (170)
185 2qkv_A Inactivation-NO-after-p 98.9 2.9E-09 1E-13 81.8 8.7 77 203-284 8-90 (96)
186 1x5q_A LAP4 protein; PDZ domai 98.9 2.4E-09 8.3E-14 84.3 8.4 64 292-355 23-92 (110)
187 3ngh_A PDZ domain-containing p 98.9 2.9E-09 1E-13 83.3 8.8 78 204-285 2-85 (106)
188 2eeh_A PDZ domain-containing p 98.9 2E-09 6.7E-14 83.4 7.7 62 294-355 21-82 (100)
189 2kom_A Partitioning defective 98.9 2.4E-09 8.1E-14 86.1 8.4 65 292-356 38-106 (121)
190 1v5q_A GRIP1 homolog, glutamat 98.9 2.2E-09 7.5E-14 86.4 8.1 64 294-357 26-94 (122)
191 2eei_A PDZ domain-containing p 98.9 1E-09 3.4E-14 86.0 5.9 65 291-356 15-79 (106)
192 2fcf_A Multiple PDZ domain pro 98.9 2E-09 6.8E-14 83.8 7.6 63 295-357 16-88 (103)
193 1um1_A KIAA1849 protein, RSGI 98.9 1.9E-09 6.5E-14 85.0 7.5 65 292-356 16-84 (110)
194 2gzv_A PRKCA-binding protein; 98.9 5.9E-09 2E-13 82.8 10.5 84 199-284 20-109 (114)
195 2vz5_A TAX1-binding protein 3; 98.9 1.6E-09 5.4E-14 89.3 7.2 64 295-358 38-113 (139)
196 2db5_A INAD-like protein; PDZ 98.9 1.1E-09 3.7E-14 88.9 6.1 63 294-356 36-103 (128)
197 1n7t_A 99-MER peptide of densi 98.9 2.2E-09 7.4E-14 83.6 7.6 62 294-356 20-89 (103)
198 3k1r_A Harmonin; protein-prote 98.9 1.4E-09 4.8E-14 94.6 7.2 62 294-355 95-156 (192)
199 2iwn_A Multiple PDZ domain pro 98.9 3.5E-09 1.2E-13 81.2 8.6 64 292-355 12-80 (97)
200 2jil_A GRIP1 protein, glutamat 98.9 3.7E-09 1.3E-13 81.3 8.7 81 204-285 4-92 (97)
201 2kjd_A Sodium/hydrogen exchang 98.9 2.3E-09 8E-14 86.8 7.9 66 292-358 17-82 (128)
202 2daz_A INAD-like protein; PDZ 98.9 5.7E-09 2E-13 84.1 10.2 82 202-285 24-111 (124)
203 1va8_A Maguk P55 subfamily mem 98.9 2.2E-09 7.5E-14 85.1 7.6 60 295-357 37-97 (113)
204 1ujd_A KIAA0559 protein; PDZ d 98.9 5.1E-09 1.7E-13 83.5 9.8 83 203-285 12-109 (117)
205 2o2t_A Multiple PDZ domain pro 98.9 9.7E-10 3.3E-14 87.7 5.5 63 294-356 31-98 (117)
206 1uez_A KIAA1526 protein; PDZ d 98.9 1.2E-09 4.3E-14 84.7 6.0 63 293-355 19-81 (101)
207 1uhp_A Hypothetical protein KI 98.9 5.4E-09 1.9E-13 81.9 9.7 80 203-284 8-100 (107)
208 1uew_A Membrane associated gua 98.9 6.4E-09 2.2E-13 82.5 10.2 83 202-285 9-103 (114)
209 1um1_A KIAA1849 protein, RSGI 98.9 8.5E-09 2.9E-13 81.2 10.8 82 203-285 8-96 (110)
210 1z87_A Alpha-1-syntrophin; pro 98.9 1.3E-09 4.6E-14 98.9 7.0 63 294-356 88-151 (263)
211 2opg_A Multiple PDZ domain pro 98.9 7.9E-09 2.7E-13 79.5 10.4 80 204-285 5-90 (98)
212 2dmz_A INAD-like protein; PDZ 98.9 1.5E-09 5.2E-14 88.1 6.5 63 293-355 25-93 (129)
213 1vae_A Rhophilin 2, rhophilin, 98.9 1.2E-09 4.2E-14 86.4 5.7 64 291-358 22-85 (111)
214 3nfk_A Tyrosine-protein phosph 98.9 4.7E-09 1.6E-13 82.2 9.0 80 202-283 16-106 (107)
215 2dlu_A INAD-like protein; PDZ 98.9 2.1E-09 7.2E-14 84.9 7.1 63 292-356 23-86 (111)
216 3hpk_A Protein interacting wit 98.9 7.8E-09 2.7E-13 83.4 10.6 79 203-283 19-103 (125)
217 1q7x_A PDZ2B domain of PTP-BAS 98.9 1.7E-09 5.7E-14 85.0 6.4 65 292-356 17-90 (108)
218 3egg_C Spinophilin; PP1, serin 98.9 5.3E-09 1.8E-13 89.0 10.0 81 203-284 80-170 (170)
219 3qe1_A Sorting nexin-27, G pro 98.9 6.3E-09 2.2E-13 81.5 9.7 81 203-285 6-102 (107)
220 1uju_A Scribble; PDZ domain, c 98.9 8.1E-10 2.8E-14 87.3 4.5 63 294-356 20-92 (111)
221 2edp_A Fragment, shroom family 98.9 1.2E-09 4.2E-14 84.6 5.4 63 293-356 19-82 (100)
222 1x5n_A Harmonin; PDZ domain, u 98.9 2.7E-09 9.3E-14 84.6 7.6 65 292-356 24-88 (114)
223 2d90_A PDZ domain containing p 98.9 3.8E-09 1.3E-13 82.0 8.3 78 202-284 5-88 (102)
224 2edz_A PDZ domain-containing p 98.9 2.3E-09 7.9E-14 85.1 7.1 63 293-356 23-85 (114)
225 1wha_A KIAA0147 protein, scrib 98.9 5.8E-09 2E-13 81.5 9.3 82 203-285 7-98 (105)
226 2iwq_A Multiple PDZ domain pro 98.9 4E-09 1.4E-13 85.0 8.6 64 294-357 35-108 (123)
227 2f5y_A Regulator of G-protein 98.9 6.4E-09 2.2E-13 79.0 9.1 74 204-285 4-83 (91)
228 3kzd_A TIAM-1, T-lymphoma inva 98.9 8.4E-09 2.9E-13 78.7 9.7 79 203-283 6-90 (94)
229 1q3o_A Shank1; PDZ, GKAP, pept 98.9 1.1E-08 3.8E-13 80.4 10.7 80 204-284 8-103 (109)
230 1n7e_A AMPA receptor interacti 98.9 1E-08 3.5E-13 78.8 10.3 80 203-285 5-90 (97)
231 1uju_A Scribble; PDZ domain, c 98.9 1.4E-09 4.9E-14 85.9 5.5 83 202-284 8-103 (111)
232 1uep_A Membrane associated gua 98.9 2.4E-09 8.1E-14 83.4 6.6 80 203-285 9-96 (103)
233 2pa1_A PDZ and LIM domain prot 98.9 5.2E-09 1.8E-13 78.7 8.2 76 207-285 4-85 (87)
234 1ueq_A Membrane associated gua 98.9 9.3E-09 3.2E-13 82.8 10.2 80 203-285 19-106 (123)
235 1ufx_A KIAA1526 protein; PDZ d 98.9 4.5E-09 1.5E-13 82.0 8.0 79 204-284 7-96 (103)
236 1x6d_A Interleukin-16; PDZ dom 98.9 4.7E-09 1.6E-13 84.0 8.3 84 201-285 13-103 (119)
237 1whd_A RGS3, regulator of G-pr 98.9 1.2E-09 4.1E-14 84.7 4.7 62 292-357 23-84 (100)
238 1wg6_A Hypothetical protein (r 98.9 2.2E-09 7.6E-14 87.0 6.3 81 205-285 27-122 (127)
239 2dm8_A INAD-like protein; PDZ 98.9 1.4E-09 4.8E-14 86.6 5.0 65 292-356 25-91 (116)
240 2csj_A TJP2 protein; PDZ domai 98.9 2.4E-09 8.3E-14 85.4 6.5 62 294-356 25-92 (117)
241 4amh_A Disks large homolog 1; 98.9 5.6E-09 1.9E-13 81.8 8.4 76 209-285 7-92 (106)
242 3r68_A Na(+)/H(+) exchange reg 98.9 6.1E-09 2.1E-13 79.7 8.4 78 202-284 4-87 (95)
243 3k1r_A Harmonin; protein-prote 98.9 6.6E-09 2.3E-13 90.3 9.7 82 202-286 83-169 (192)
244 2eno_A Synaptojanin-2-binding 98.9 8.1E-09 2.8E-13 82.7 9.3 83 202-285 16-107 (120)
245 1wf8_A Neurabin-I; PDZ domain, 98.9 6.1E-09 2.1E-13 81.6 8.4 81 203-284 9-99 (107)
246 2q3g_A PDZ and LIM domain prot 98.9 9.3E-09 3.2E-13 77.7 9.2 74 206-284 6-85 (89)
247 1g9o_A NHE-RF; PDZ domain, com 98.9 1.4E-08 5E-13 76.9 10.2 75 204-283 4-84 (91)
248 3axa_A Afadin, nectin-3, prote 98.9 1.1E-08 3.7E-13 80.0 9.7 81 203-285 11-98 (106)
249 2dkr_A LIN-7 homolog B; LIN-7B 98.9 8.9E-09 3.1E-13 78.4 9.0 79 203-284 5-89 (93)
250 1x5q_A LAP4 protein; PDZ domai 98.9 1.6E-08 5.6E-13 79.5 10.8 80 204-285 16-105 (110)
251 1q7x_A PDZ2B domain of PTP-BAS 98.9 8.3E-09 2.8E-13 81.0 9.1 83 202-285 8-102 (108)
252 1va8_A Maguk P55 subfamily mem 98.9 8.9E-09 3.1E-13 81.6 9.3 78 202-285 24-108 (113)
253 2dlu_A INAD-like protein; PDZ 98.9 9.4E-09 3.2E-13 81.1 9.3 79 203-286 15-99 (111)
254 1uez_A KIAA1526 protein; PDZ d 98.9 4E-09 1.4E-13 81.7 6.9 80 202-284 7-92 (101)
255 2iwq_A Multiple PDZ domain pro 98.9 1.2E-08 4.1E-13 82.2 9.9 83 202-284 23-118 (123)
256 1wif_A RSGI RUH-020, riken cDN 98.9 1.7E-09 5.9E-14 87.4 4.8 64 290-356 33-97 (126)
257 2g5m_B Neurabin-2; spinophilin 98.9 4.8E-09 1.7E-13 83.0 7.3 81 204-285 5-95 (113)
258 1v5q_A GRIP1 homolog, glutamat 98.9 9.5E-09 3.3E-13 82.6 9.2 83 203-285 15-107 (122)
259 2cs5_A Tyrosine-protein phosph 98.8 7.6E-09 2.6E-13 82.7 8.4 81 202-285 14-106 (119)
260 2djt_A Unnamed protein product 98.8 6.1E-09 2.1E-13 81.1 7.5 82 203-285 11-98 (104)
261 1tp5_A Presynaptic density pro 98.8 1.3E-08 4.6E-13 81.2 9.6 79 202-284 13-97 (119)
262 1tp5_A Presynaptic density pro 98.8 6.3E-09 2.2E-13 83.1 7.7 64 292-356 22-86 (119)
263 1qau_A Neuronal nitric oxide s 98.8 7.6E-09 2.6E-13 81.7 8.1 64 294-358 12-76 (112)
264 1mfg_A ERB-B2 interacting prot 98.8 1.7E-08 5.9E-13 77.2 9.8 75 206-284 6-92 (95)
265 1i16_A Interleukin 16, LCF; cy 98.8 9.4E-09 3.2E-13 83.6 8.7 83 201-285 27-118 (130)
266 3bpu_A Membrane-associated gua 98.8 1.2E-08 4E-13 76.9 8.7 75 203-284 3-85 (88)
267 2dmz_A INAD-like protein; PDZ 98.8 1.2E-08 4.2E-13 82.7 9.4 84 202-285 14-106 (129)
268 2yuy_A RHO GTPase activating p 98.8 1.2E-09 4.3E-14 88.3 3.4 47 310-356 62-108 (126)
269 2qbw_A PDZ-fibronectin fusion 98.8 7.6E-09 2.6E-13 89.8 8.5 62 295-357 2-71 (195)
270 1nf3_C PAR-6B; semi-CRIB motif 98.8 8.3E-09 2.8E-13 83.7 8.1 86 200-285 26-125 (128)
271 2d8i_A T-cell lymphoma invasio 98.8 2.4E-09 8.1E-14 85.1 4.6 60 296-355 30-90 (114)
272 1v6b_A Harmonin isoform A1; st 98.8 1.4E-08 4.7E-13 81.1 9.2 79 203-284 18-106 (118)
273 2rcz_A Tight junction protein 98.8 8.1E-09 2.8E-13 76.3 7.2 59 293-357 11-70 (81)
274 1x5n_A Harmonin; PDZ domain, u 98.8 1.5E-08 5.1E-13 80.3 9.2 79 203-284 15-98 (114)
275 3gsl_A Disks large homolog 4; 98.8 8.2E-09 2.8E-13 89.4 8.3 66 291-356 12-83 (196)
276 2eaq_A LIM domain only protein 98.8 1E-08 3.4E-13 77.7 7.8 73 206-284 6-88 (90)
277 2koj_A Partitioning defective 98.8 2.8E-08 9.7E-13 78.2 10.6 80 205-285 13-101 (111)
278 2h2b_A Tight junction protein 98.8 1.2E-08 4.2E-13 79.8 8.4 60 294-354 18-83 (107)
279 2csj_A TJP2 protein; PDZ domai 98.8 1.5E-08 5E-13 80.8 9.0 81 203-285 14-104 (117)
280 2fcf_A Multiple PDZ domain pro 98.8 1.9E-08 6.4E-13 78.1 9.4 82 204-285 5-99 (103)
281 2uzc_A Human pdlim5, PDZ and L 98.8 1.6E-08 5.6E-13 76.1 8.8 76 204-284 4-85 (88)
282 2qt5_A Glutamate receptor-inte 98.8 1.2E-08 4.1E-13 89.1 9.2 65 292-356 16-81 (200)
283 1ujv_A Membrane associated gua 98.8 1.4E-08 4.8E-13 78.0 8.5 62 291-357 17-78 (96)
284 2kpk_A Membrane-associated gua 98.8 1.1E-08 3.8E-13 83.1 8.1 79 204-285 19-105 (129)
285 2jre_A C60-1 PDZ domain peptid 98.8 2.2E-08 7.7E-13 78.4 9.4 83 203-285 12-104 (108)
286 3cyy_A Tight junction protein 98.8 1.5E-08 5E-13 76.9 8.0 57 294-356 14-71 (92)
287 2dm8_A INAD-like protein; PDZ 98.8 7.4E-09 2.5E-13 82.3 6.5 84 200-285 14-103 (116)
288 2jxo_A Ezrin-radixin-moesin-bi 98.8 1.5E-08 5.2E-13 77.9 8.1 76 204-284 10-92 (98)
289 3r0h_A INAD, inactivation-NO-a 98.8 1.1E-08 3.8E-13 89.6 8.1 66 292-357 26-96 (206)
290 2eaq_A LIM domain only protein 98.8 1.4E-08 4.8E-13 76.8 7.5 58 295-355 17-74 (90)
291 2kv8_A RGS12, regulator of G-p 98.8 4.9E-09 1.7E-13 78.2 4.8 74 203-284 2-81 (83)
292 2kom_A Partitioning defective 98.8 4.5E-08 1.5E-12 78.5 10.8 80 204-284 31-119 (121)
293 2pkt_A PDZ and LIM domain prot 98.8 1.9E-08 6.4E-13 76.3 8.2 76 205-285 5-86 (91)
294 1wif_A RSGI RUH-020, riken cDN 98.8 1E-08 3.4E-13 82.9 6.8 76 203-284 27-110 (126)
295 2edz_A PDZ domain-containing p 98.8 2.3E-08 7.8E-13 79.3 8.8 79 203-285 13-97 (114)
296 1qau_A Neuronal nitric oxide s 98.8 3.9E-08 1.3E-12 77.6 10.1 78 204-285 2-87 (112)
297 1rgw_A ZAsp protein; PDZ, cyph 98.8 1.7E-08 6E-13 75.4 7.7 75 205-284 3-83 (85)
298 3sfj_A TAX1-binding protein 3; 98.8 3.6E-08 1.2E-12 76.7 9.3 77 206-283 7-103 (104)
299 1uit_A Human discs large 5 pro 98.8 3.7E-08 1.3E-12 78.4 9.5 77 203-285 19-101 (117)
300 1um7_A Synapse-associated prot 98.8 6E-09 2.1E-13 82.4 4.7 64 292-356 23-87 (113)
301 2edv_A FERM and PDZ domain-con 98.7 5.3E-09 1.8E-13 80.4 4.1 56 295-355 21-76 (96)
302 1n7t_A 99-MER peptide of densi 98.7 1.4E-08 4.7E-13 79.0 6.6 76 205-284 13-100 (103)
303 3e17_A Tight junction protein 98.7 3.5E-08 1.2E-12 74.5 8.6 71 207-285 4-81 (88)
304 2d8i_A T-cell lymphoma invasio 98.7 2.6E-08 8.9E-13 79.0 8.1 80 202-285 14-101 (114)
305 1uf1_A KIAA1526 protein; PDZ d 98.7 5.1E-08 1.7E-12 78.9 9.9 81 202-285 19-104 (128)
306 2vsv_A Rhophilin-2; scaffold p 98.7 2.5E-08 8.7E-13 78.4 7.8 75 202-284 22-103 (109)
307 2z17_A Pleckstrin homology SEC 98.7 2.5E-08 8.7E-13 77.6 7.7 62 203-265 15-81 (104)
308 3soe_A Membrane-associated gua 98.7 4.7E-08 1.6E-12 77.1 9.1 77 202-287 11-95 (113)
309 3khf_A Microtubule-associated 98.7 3.1E-08 1.1E-12 76.3 7.9 78 206-285 5-93 (99)
310 2eei_A PDZ domain-containing p 98.7 1.6E-08 5.3E-13 79.1 6.0 78 203-285 8-91 (106)
311 2edp_A Fragment, shroom family 98.7 1.7E-08 5.7E-13 78.1 5.8 81 202-285 8-94 (100)
312 1vb7_A PDZ and LIM domain 2; P 98.7 1.2E-08 4.2E-13 77.9 4.9 76 207-285 8-89 (94)
313 2eeg_A PDZ and LIM domain prot 98.7 3.7E-08 1.3E-12 75.2 7.6 77 204-285 9-91 (94)
314 3tsv_A Tight junction protein 98.7 4.6E-08 1.6E-12 78.8 8.5 67 214-285 38-112 (124)
315 1uit_A Human discs large 5 pro 98.7 2.7E-08 9.2E-13 79.2 6.6 61 292-354 27-87 (117)
316 3qik_A Phosphatidylinositol 3, 98.7 5.9E-08 2E-12 74.6 8.1 75 202-283 16-99 (101)
317 2iwn_A Multiple PDZ domain pro 98.7 9.4E-08 3.2E-12 73.1 9.3 79 205-284 6-92 (97)
318 1p1d_A PDZ45, glutamate recept 98.7 2.8E-08 9.4E-13 86.5 7.1 64 294-357 17-85 (196)
319 1b8q_A Protein (neuronal nitri 98.7 1.3E-08 4.6E-13 82.2 4.3 64 294-358 19-83 (127)
320 3tsz_A Tight junction protein 98.7 3.4E-08 1.2E-12 95.1 7.9 63 294-358 18-81 (391)
321 2edv_A FERM and PDZ domain-con 98.7 1.5E-08 5.1E-13 77.8 4.3 75 203-285 8-89 (96)
322 1um7_A Synapse-associated prot 98.7 3.2E-08 1.1E-12 78.1 6.4 79 202-284 14-98 (113)
323 2vz5_A TAX1-binding protein 3; 98.7 6.1E-08 2.1E-12 79.7 8.2 82 203-285 23-124 (139)
324 1y7n_A Amyloid beta A4 precurs 98.6 9.9E-08 3.4E-12 72.3 8.5 68 206-283 14-88 (90)
325 2krg_A Na(+)/H(+) exchange reg 98.6 2.5E-08 8.7E-13 88.1 5.8 64 292-356 17-80 (216)
326 1z87_A Alpha-1-syntrophin; pro 98.6 3.6E-08 1.2E-12 89.5 7.0 80 203-285 77-163 (263)
327 1wf7_A Enigma homologue protei 98.6 3.8E-08 1.3E-12 76.5 6.0 77 204-285 6-88 (103)
328 2yub_A LIMK-2, LIM domain kina 98.6 2.5E-08 8.6E-13 79.6 4.8 62 295-356 27-93 (118)
329 1wh1_A KIAA1095 protein; PDZ d 98.6 6.6E-08 2.3E-12 77.8 7.1 62 295-358 32-96 (124)
330 3shw_A Tight junction protein 98.6 8.1E-08 2.8E-12 94.0 9.1 75 204-285 2-84 (468)
331 2lob_A Golgi-associated PDZ an 98.0 4.4E-09 1.5E-13 83.3 0.0 61 203-266 27-88 (112)
332 1wh1_A KIAA1095 protein; PDZ d 98.6 5.8E-08 2E-12 78.2 6.5 81 205-285 21-107 (124)
333 2kjd_A Sodium/hydrogen exchang 98.6 1.3E-07 4.4E-12 76.4 8.5 77 203-284 9-92 (128)
334 3shw_A Tight junction protein 98.6 6.9E-08 2.3E-12 94.5 7.9 61 294-356 10-70 (468)
335 3tsz_A Tight junction protein 98.6 2E-07 6.7E-12 89.7 10.8 78 201-285 7-92 (391)
336 1wfv_A Membrane associated gua 98.6 2.9E-08 1E-12 77.0 3.9 78 205-285 13-96 (103)
337 1b8q_A Protein (neuronal nitri 98.6 5.4E-08 1.9E-12 78.6 5.5 81 202-286 7-95 (127)
338 1w9e_A Syntenin 1; cell adhesi 98.6 1.4E-07 4.7E-12 79.8 7.8 62 294-358 15-76 (166)
339 1ujv_A Membrane associated gua 98.5 4.1E-07 1.4E-11 69.7 9.3 74 203-285 10-91 (96)
340 1whd_A RGS3, regulator of G-pr 98.5 5.7E-08 2E-12 75.1 4.4 73 204-284 16-94 (100)
341 2yuy_A RHO GTPase activating p 98.5 2.5E-08 8.6E-13 80.6 2.1 81 202-284 7-119 (126)
342 2rcz_A Tight junction protein 98.5 6.9E-07 2.4E-11 65.7 8.6 69 208-284 6-80 (81)
343 2qbw_A PDZ-fibronectin fusion 98.5 5E-07 1.7E-11 78.2 9.0 67 215-283 2-80 (195)
344 1v5l_A PDZ and LIM domain 3; a 98.4 5E-08 1.7E-12 75.8 1.8 75 206-285 8-88 (103)
345 2yub_A LIMK-2, LIM domain kina 98.4 7.7E-07 2.6E-11 70.9 8.4 79 207-286 19-106 (118)
346 1vae_A Rhophilin 2, rhophilin, 98.4 1.1E-07 3.7E-12 75.1 3.2 73 204-284 16-95 (111)
347 3id1_A Regulator of sigma E pr 98.4 4E-07 1.4E-11 69.7 6.1 47 310-358 3-49 (95)
348 3cyy_A Tight junction protein 98.4 1.6E-06 5.4E-11 65.5 8.9 72 206-285 5-83 (92)
349 3suz_A Amyloid beta A4 precurs 98.4 1.3E-07 4.3E-12 91.1 3.0 64 293-356 214-280 (388)
350 3i18_A LMO2051 protein; alpha- 98.4 1.1E-06 3.7E-11 67.8 7.6 55 230-286 6-66 (100)
351 2zpm_A Regulator of sigma E pr 98.3 3.7E-07 1.3E-11 69.0 4.5 47 310-358 5-51 (91)
352 3id1_A Regulator of sigma E pr 98.3 6.7E-07 2.3E-11 68.4 5.7 53 232-285 3-61 (95)
353 2l97_A HTRA, putative serine p 98.3 1.2E-06 4.1E-11 71.4 7.4 45 309-356 57-101 (134)
354 2i6v_A General secretion pathw 98.3 5.3E-07 1.8E-11 67.7 4.5 45 310-356 20-64 (87)
355 2krg_A Na(+)/H(+) exchange reg 98.3 8.3E-07 2.8E-11 78.3 6.3 78 202-284 8-92 (216)
356 2kjp_A Uncharacterized protein 98.3 2.1E-07 7.2E-12 70.7 2.0 44 310-356 2-45 (91)
357 2i6v_A General secretion pathw 98.3 6.7E-07 2.3E-11 67.1 4.8 53 232-285 20-78 (87)
358 2pzd_A Serine protease HTRA2; 98.2 1.4E-06 4.9E-11 68.6 6.0 56 230-286 34-92 (113)
359 2kl1_A YLBL protein; structure 98.2 1E-06 3.4E-11 67.2 4.4 54 231-286 5-64 (94)
360 2kjp_A Uncharacterized protein 98.2 3E-07 1E-11 69.8 1.4 53 232-286 2-60 (91)
361 3i18_A LMO2051 protein; alpha- 98.2 1.8E-06 6.1E-11 66.6 5.9 45 309-356 7-51 (100)
362 2kl1_A YLBL protein; structure 98.2 7.2E-07 2.4E-11 68.1 3.5 45 309-356 5-49 (94)
363 2l97_A HTRA, putative serine p 98.2 2.6E-06 8.9E-11 69.4 7.1 54 231-286 57-116 (134)
364 2pzd_A Serine protease HTRA2; 98.1 2.4E-06 8.3E-11 67.2 5.6 45 309-355 35-79 (113)
365 2p3w_A Probable serine proteas 98.1 2.3E-06 7.8E-11 67.3 5.2 55 231-286 35-92 (112)
366 1fc6_A Photosystem II D1 prote 98.1 4.4E-06 1.5E-10 80.3 8.1 63 296-358 86-148 (388)
367 3rle_A Golgi reassembly-stacki 98.1 2E-06 6.9E-11 75.5 5.2 41 306-346 13-54 (209)
368 2i4s_A General secretion pathw 98.1 3.1E-06 1.1E-10 65.8 5.6 53 232-285 38-96 (105)
369 2i4s_A General secretion pathw 98.0 4E-06 1.4E-10 65.2 4.6 43 311-355 39-81 (105)
370 2p3w_A Probable serine proteas 98.0 5.7E-06 1.9E-10 65.0 5.3 44 309-354 35-78 (112)
371 2zpm_A Regulator of sigma E pr 98.0 3.4E-06 1.1E-10 63.6 3.7 52 233-286 6-63 (91)
372 2hga_A Conserved protein MTH13 97.9 1.7E-05 5.7E-10 63.8 6.4 44 309-355 25-68 (125)
373 1te0_A Protease DEGS; two doma 97.9 1.8E-05 6.1E-10 73.9 7.0 48 309-358 244-292 (318)
374 3stj_A Protease DEGQ; serine p 97.9 1.5E-05 5.2E-10 75.3 6.4 55 231-286 263-323 (345)
375 1y8t_A Hypothetical protein RV 97.8 4.3E-05 1.5E-09 71.4 8.8 54 231-285 242-302 (324)
376 2hga_A Conserved protein MTH13 97.8 2.8E-05 9.5E-10 62.4 6.1 53 231-286 25-83 (125)
377 1y8t_A Hypothetical protein RV 97.8 3.2E-05 1.1E-09 72.3 7.4 57 296-355 230-286 (324)
378 3stj_A Protease DEGQ; serine p 97.8 1.7E-05 5.7E-10 75.0 5.4 46 309-356 263-308 (345)
379 1te0_A Protease DEGS; two doma 97.8 2.7E-05 9.1E-10 72.7 6.6 55 231-286 244-304 (318)
380 2cy5_A Epidermal growth factor 97.8 0.00035 1.2E-08 56.5 12.0 119 29-157 9-130 (140)
381 3k50_A Putative S41 protease; 97.8 1.2E-05 4.2E-10 77.4 3.9 42 311-355 92-133 (403)
382 3k50_A Putative S41 protease; 97.8 2.2E-05 7.5E-10 75.6 5.6 69 215-284 74-145 (403)
383 1lcy_A HTRA2 serine protease; 97.7 4.1E-05 1.4E-09 71.7 6.9 55 231-286 256-313 (325)
384 4fgm_A Aminopeptidase N family 97.7 5.1E-05 1.7E-09 76.8 7.8 66 216-287 486-556 (597)
385 3qo6_A Protease DO-like 1, chl 97.6 5.4E-05 1.8E-09 71.6 6.0 55 231-286 251-322 (348)
386 1lcy_A HTRA2 serine protease; 97.6 5.1E-05 1.7E-09 71.1 5.3 45 309-355 256-300 (325)
387 1fc6_A Photosystem II D1 prote 97.5 0.00023 8E-09 68.2 8.9 69 215-286 85-160 (388)
388 3pv2_A DEGQ; trypsin fold, PDZ 97.5 8.1E-05 2.8E-09 72.8 5.5 45 309-355 282-326 (451)
389 4a8c_A Periplasmic PH-dependen 97.5 0.00011 3.6E-09 71.7 6.1 45 309-355 263-307 (436)
390 3qo6_A Protease DO-like 1, chl 97.4 9.6E-05 3.3E-09 69.8 4.1 44 310-355 252-306 (348)
391 3num_A Serine protease HTRA1; 97.4 2.7E-05 9.2E-10 73.1 0.0 54 231-285 254-310 (332)
392 4fgm_A Aminopeptidase N family 97.3 0.00022 7.6E-09 72.1 6.1 55 295-355 485-539 (597)
393 3num_A Serine protease HTRA1; 97.2 4.6E-05 1.6E-09 71.6 0.0 45 309-355 254-298 (332)
394 1ky9_A Protease DO, DEGP, HTRA 97.1 0.00014 4.7E-09 71.2 1.6 45 309-355 286-330 (448)
395 1k32_A Tricorn protease; prote 96.6 0.0023 7.8E-08 68.8 6.3 57 296-358 738-804 (1045)
396 1k32_A Tricorn protease; prote 95.9 0.012 4.2E-07 63.1 7.4 64 215-285 737-815 (1045)
397 4fln_A Protease DO-like 2, chl 95.8 0.0084 2.9E-07 59.6 5.4 34 309-343 277-310 (539)
398 4dxa_B KREV interaction trappe 90.2 0.59 2E-05 43.1 7.1 69 70-154 241-309 (322)
399 4f7g_A Talin-1; alpha-helix bu 83.2 2.6 9E-05 36.3 6.9 70 70-155 142-211 (222)
400 1mix_A Talin; focal adhesion, 81.2 4.3 0.00015 34.3 7.4 69 70-154 131-199 (206)
401 3ivf_A Talin-1; FERM domain, c 72.2 9.4 0.00032 35.5 7.6 68 71-154 297-364 (371)
402 3pvl_A Myosin VIIA isoform 1; 71.8 11 0.00037 38.2 8.4 71 71-155 493-564 (655)
403 3au4_A Myosin-X; protein-prote 49.7 53 0.0018 32.2 8.7 69 71-158 466-535 (555)
404 1h4r_A Merlin; FERM, neurofibr 47.7 57 0.0019 29.2 8.0 40 70-109 230-270 (314)
405 3dor_A Protein CT_858, CPAF; m 38.3 34 0.0012 33.9 5.0 28 311-342 98-125 (583)
406 1ef1_A Moesin; membrane, FERM 35.6 59 0.002 28.8 5.9 40 70-109 210-250 (294)
407 1p5t_A DOK1, docking protein 1 33.5 1.7E+02 0.0057 22.7 7.8 72 72-156 26-101 (127)
408 2i1j_A Moesin; FERM, coiled-co 31.4 66 0.0023 31.8 6.0 40 70-109 213-253 (575)
409 3dor_A Protein CT_858, CPAF; m 29.3 65 0.0022 31.9 5.4 30 232-266 97-126 (583)
410 2v76_A Docking protein 1; alte 28.2 1.9E+02 0.0064 21.7 7.6 72 72-156 24-99 (107)
411 2dlw_A Docking protein 2, isof 25.8 1.2E+02 0.0041 23.1 5.2 72 72-156 29-101 (113)
412 3qij_A Protein 4.1; cytoskelet 24.5 1.1E+02 0.0037 27.3 5.6 38 70-109 216-253 (296)
413 1j0w_A Downstream of tyrosine 22.2 2.4E+02 0.0083 20.9 7.9 73 71-156 21-94 (103)
414 1qqg_A IRS-1, insulin receptor 21.1 2.8E+02 0.0094 24.1 7.6 39 75-113 182-220 (264)
No 1
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=100.00 E-value=1.5e-59 Score=455.03 Aligned_cols=328 Identities=54% Similarity=0.816 Sum_probs=215.3
Q ss_pred CcCCCCcEEEEeeeEEEEe-ccCCChhhHH------HHHHHHH-------HH-hCCCCCCCCCcEEEEEEECCeeEEEeC
Q psy5022 23 TGLGPGTLFRLKFLGSVQV-DEDDPKCCKR------RVKKVMV-------EE-AAPEGETQPSTEVDLFISTEKIMVLNT 87 (359)
Q Consensus 23 ~~l~~gv~f~~kylGs~~V-~~~~~~~~~~------~~~~~~~-------~~-~~~~~~~~~~~~v~l~iS~~gi~~~~~ 87 (359)
|.|++||+|.+|||||+|| ++..++..++ +++++.+ .+ +.+++..+++++|.|+||++||++++.
T Consensus 3 e~l~~gv~f~~kylG~~~v~s~~~~~~~~r~~~~~eai~rv~~~~k~~~~~~~~~~~~~~~~~~~v~l~IS~~gi~v~~~ 82 (388)
T 3suz_A 3 EDLIDGIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVSRVKRMQKAAKIKKKANSEGDAQTLTEVDLFISTQRIKVLNA 82 (388)
T ss_dssp HHHHHCEEEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCCSSEEEEEEECSSEEEEEET
T ss_pred ccccCCcEEeeeEeeeeeccCCCCCCccchHHHHHHHHHHHHHHHhhccccccCCCcccccccceEEEEEEeceEEEEec
Confidence 5689999999999999999 4444444332 2222222 11 136888899999999999999999999
Q ss_pred CccceeeccccceeeeEEecCCceEEeeecccccccC---C----CCCCCCCCCcceeeEeeccchhhHHhhcchhhHHH
Q psy5022 88 DLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEA---D----EPPKISRTPKMICHVFESDEAQFIAQSIGQAFQVA 160 (359)
Q Consensus 88 ~t~~~~~~~~l~~IS~~~~~~~~~~~~~~~~f~~~~~---~----~~~~~~~~~~~~Chvf~s~~a~~i~~~ig~af~~a 160 (359)
+|++++|+|+|++||||+|+.++|+||+++....... . ......+..+++||||+|++|+.|+++++|||+++
T Consensus 83 ~t~~~~~~~~l~~IS~~~d~~~~~~~iak~~~~~~~~~~~~~~~~~~~~~~~~~~~~ChvF~s~~a~~i~~ti~qaf~~~ 162 (388)
T 3suz_A 83 DTQETMMDHALRTISYIADIGNIVVLMARRRMPRSASQDCIETTPGAQEGKKQYKMICHVFESEDAQLIAQSIGQAFSVA 162 (388)
T ss_dssp TTCCEEEEEEGGGEEEEEECSSEEEEEEEECCCCCC-------------CCCCEEEEEEEEECTTHHHHHHHHHHHHHHH
T ss_pred CCcChhhhccccceeEEeecCceEEEEEecCCCccccccccccCccccccccccceEEEEecccCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999986532211 0 01122356789999999999999999999999999
Q ss_pred HHHHHHhcCCCCcccccchhhhhhhcccccccchhhhhhcccccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECC
Q psy5022 161 YMEFLKANGIEDHSFVKEMDYQEVLNSQEIFGDELQMFAKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAP 240 (359)
Q Consensus 161 y~~~L~~~gi~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~ 240 (359)
|++||++++++..+. .+.+|+..++.+.++++++..|..++.+++|.+.|..+++|||.|.+..+|...++++|..|.+
T Consensus 163 y~~~l~~~gi~~~~~-~~~~y~~~~~~~~~~~d~~~~~~~~~~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~ 241 (388)
T 3suz_A 163 YQEFLRANGINPEDL-SQKEYSDIINTQEMYNDDLIHFSNSENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMN 241 (388)
T ss_dssp HHHHHHHHTCCTTTS-CHHHHHHHHHHHHHHHHHHHHTCCSSCCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCC
T ss_pred hhhhccccCcCcccc-chhhhcccccccccccchhhhhcccccceEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCC
Confidence 999999999987766 6679999999999999999999999999999999998899999998766776667889999999
Q ss_pred CChhhhcCCCCCCCEEEEECCccHHH--------HHHhhcCCCeEEEEEEeCcceEE-ee---ccccccCcEEecccccc
Q psy5022 241 AGAAARCGQLNIGDQIIAVNGVSLVA--------YMEFLKANGIEDHSFVKEMDYQE-VL---NSQEIFGDELQMFAKKE 308 (359)
Q Consensus 241 ~s~A~~~G~L~~GD~Il~Vng~~v~~--------~~~~~~~~~~v~l~v~~~~~~~~-~~---~~~~~~G~~~~~~~~~~ 308 (359)
+|||+++|+|++||+|++|||+++.+ +++..+.+..++|++.+...... .. .....+||.+.
T Consensus 242 gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r~~~~~~v~l~~~~~~~~lG~~i~------ 315 (388)
T 3suz_A 242 GGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPVTTVLIKRPDLKYQLGFSVQ------ 315 (388)
T ss_dssp SSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEECCSCC------------------------
T ss_pred CCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCCCccccccccccccceeeEeecCCCCccceEEe------
Confidence 99999999999999999999999865 33344345669999987643221 11 23456888876
Q ss_pred cCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 309 LQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 309 ~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
+.+|..|.+||||+++||++||+|++|||+++.+++|++++++|+++.+
T Consensus 316 -~g~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~ 364 (388)
T 3suz_A 316 -NGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVG 364 (388)
T ss_dssp --------------------------------------------------
T ss_pred -cCEEEEeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 3489999999999999999999999999999999999999999987643
No 2
>4dbb_A Amyloid beta A4 precursor protein-binding family 1; X11S/mints, PTB domain, chimera protein, protein transport; HET: IPA GOL; 1.90A {Rattus norvegicus}
Probab=100.00 E-value=6.6e-37 Score=260.51 Aligned_cols=158 Identities=55% Similarity=0.848 Sum_probs=122.0
Q ss_pred cCcCCCCcEEEEeeeEEEEeccCC-ChhhHHH--HHHHHHHHhCCCCCCCCCcEEEEEEECCeeEEEeCCccceeecccc
Q psy5022 22 DTGLGPGTLFRLKFLGSVQVDEDD-PKCCKRR--VKKVMVEEAAPEGETQPSTEVDLFISTEKIMVLNTDLKEIMMDHAL 98 (359)
Q Consensus 22 ~~~l~~gv~f~~kylGs~~V~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~l~iS~~gi~~~~~~t~~~~~~~~l 98 (359)
+|.|++||.|.||||||++|...+ +...+++ +++.|.+. ++.++.+++++|.|+||++||+++|.+|++++|+|+|
T Consensus 2 pe~l~~Gv~F~vkYLGs~eV~s~r~~~~~~r~~~~~eAi~ri-~~~~~~~~~~~V~L~IS~~gIkv~d~~t~~~i~~~~l 80 (162)
T 4dbb_A 2 PEDLIDGIIFAANYLGSTQLLSDKTPSKNVRMMQAQEAVSRI-KPEGESQPMTEVDLFISTQRIKVLNADTQEPMMDHPL 80 (162)
T ss_dssp -CCCCCEEEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHTC-C-----CCCEEEEEEEESSEEEEEETTTCCEEEEEEG
T ss_pred chhccCCcEEEeEEEeEEEEcCCCCCCcchhHHHHHHHHHHH-HHhcCCCCCcEEEEEEECCEEEEEECCCCcEEeeeec
Confidence 567899999999999999995444 3333332 12222211 2335566789999999999999999999999999999
Q ss_pred ceeeeEEecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccchhhHHhhcchhhHHHHHHHHHhcCCCCcccccc
Q psy5022 99 RTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGIEDHSFVKE 178 (359)
Q Consensus 99 ~~IS~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~a~~i~~~ig~af~~ay~~~L~~~gi~~~~~~~~ 178 (359)
++||||++++++|+||+++ +......++.||||+|++|++|+.+|||||++||++||+++|+++++. .+
T Consensus 81 ~~ISf~a~~~~~f~fIar~----------~~~~~~~~~~CHVF~~~~A~~I~~tigqAF~~ay~~~l~~~~~~~~~~-~~ 149 (162)
T 4dbb_A 81 RTISYIADIGNIVVLMARR----------RMPRSQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDL-SQ 149 (162)
T ss_dssp GGEEEEEEETTEEEEEEEE----------CCSTTCEEEEEEEEECTTHHHHHHHHHHHHHHHHGGGTTC--CCGGGS-CH
T ss_pred ceeEEEEECCCEEEEEecc----------CCCCCCCcEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHcCCChHHc-cc
Confidence 9999999988877777666 233446789999999999999999999999999999999999998877 66
Q ss_pred hhhhhhhcccccc
Q psy5022 179 MDYQEVLNSQEIF 191 (359)
Q Consensus 179 ~~~~~~l~~~~~~ 191 (359)
.+|+++++++++|
T Consensus 150 ~~~~~~~~~~~~~ 162 (162)
T 4dbb_A 150 KEYSDLLNTQDMY 162 (162)
T ss_dssp HHHHHHHHHC---
T ss_pred chhhhhccccccC
Confidence 7999999999875
No 3
>1aqc_A X11; PTB domain; 2.30A {Homo sapiens} SCOP: b.55.1.2 PDB: 1x11_A*
Probab=100.00 E-value=2.9e-35 Score=252.63 Aligned_cols=150 Identities=57% Similarity=0.858 Sum_probs=103.8
Q ss_pred CcCCCCcEEEEeeeEEEEeccCCChhh------HH-HHHHHHHHH-------hCCCCCCCCCcEEEEEEECCeeEEEeCC
Q psy5022 23 TGLGPGTLFRLKFLGSVQVDEDDPKCC------KR-RVKKVMVEE-------AAPEGETQPSTEVDLFISTEKIMVLNTD 88 (359)
Q Consensus 23 ~~l~~gv~f~~kylGs~~V~~~~~~~~------~~-~~~~~~~~~-------~~~~~~~~~~~~v~l~iS~~gi~~~~~~ 88 (359)
|.|.+||.|.||||||++|...++... ++ +++++.... +.+.++.+++++|.|+||++||+|+|++
T Consensus 2 e~l~~Gv~f~vkYLGs~eV~~~~g~~~~~R~~~~~eAi~rl~~~~~~~~~r~k~~~g~~~~~~~V~L~IS~~gikv~d~~ 81 (172)
T 1aqc_A 2 EDLIDGIIFAANYLGSTQLLSDKTPSKNVRMMQAQEAVSRIKMAQKLAKSRKKAPEGESQPMTEVDLFILTQRIKVLNAD 81 (172)
T ss_dssp CCTTTCEEEEEEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHCC--------------CEEEEEECSSEEEEEETT
T ss_pred ccccCCceEEEEeceEEEecCCCCCCcchhHHHHHHHHHHHHHHHHhhhccccccccccCCCcEEEEEEECCeEEEEeCC
Confidence 679999999999999999977776542 22 334433221 2244555678999999999999999999
Q ss_pred ccceeeccccceeeeEEecCCceEEeeeccccccc------CCCC-CCCCCCCcceeeEeeccchhhHHhhcchhhHHHH
Q psy5022 89 LKEIMMDHALRTISYIADIGDLVVLMARRRFVSQE------ADEP-PKISRTPKMICHVFESDEAQFIAQSIGQAFQVAY 161 (359)
Q Consensus 89 t~~~~~~~~l~~IS~~~~~~~~~~~~~~~~f~~~~------~~~~-~~~~~~~~~~Chvf~s~~a~~i~~~ig~af~~ay 161 (359)
|++++|+|+|++||||||++++|+||+++...--. ...+ ......++++||||+|++|++|+++|||||++||
T Consensus 82 t~~il~~~~l~~ISf~aD~~~~FayIar~~~~~~~~~~n~~~~~~~~~~~~~~~~~CHVF~s~~A~~I~~tIGqAF~~ay 161 (172)
T 1aqc_A 82 TQETMMDHPLRTISYIADIGNIVVLMARRRIPRSNSQENVEASHPSQDGKRQYKMICHVFESEDAQLIAQSIGQAFSVAY 161 (172)
T ss_dssp TCCEEEEEEGGGEEEEEEETTEEEEEECCC----------------------CEEEEEEEECTTHHHHHHHHHHHHHHHH
T ss_pred CCceEeccccceEEEEeeCCcEEEEEecCCCccccccccccccccccccCCCCcEEEEEEECccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999877777777421000 0000 0001246899999999999999999999999999
Q ss_pred HHHHHhcCCCC
Q psy5022 162 MEFLKANGIED 172 (359)
Q Consensus 162 ~~~L~~~gi~~ 172 (359)
++||++||+++
T Consensus 162 ~~~l~~~g~~~ 172 (172)
T 1aqc_A 162 QEFLRANGINP 172 (172)
T ss_dssp HHHHC------
T ss_pred HHHHHhcCCCC
Confidence 99999999863
No 4
>2ela_A Adapter protein containing PH domain, PTB domain and leucine zipper motif 1; APPL, cell cycle; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=242.52 Aligned_cols=156 Identities=20% Similarity=0.295 Sum_probs=112.3
Q ss_pred cccccccCCCCCCcccCcCCCCcEEEEeeeEEEEeccCCChhhHHH-HHHHHHHHhCCCCCCCCCcEEEEEEECCeeEEE
Q psy5022 7 HHVGCTQALPEDPVVDTGLGPGTLFRLKFLGSVQVDEDDPKCCKRR-VKKVMVEEAAPEGETQPSTEVDLFISTEKIMVL 85 (359)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~l~~gv~f~~kylGs~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~l~iS~~gi~~~ 85 (359)
||--.+.-.|+.|..++.++.++.|.||||||++|..++|..+++. ++++...++... ..++++|.|.||++||+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~f~vkYLGs~eV~~~~g~~v~~eAi~~l~~~~~~~~--~~~~~~V~L~VS~~gI~l~ 84 (175)
T 2ela_A 7 HHHHSSGLVPRGSHMTEDSILHQLFIVRFLGSMEVKSDDHPDVVYETMRQILAARAIHN--IFRMTESHLLVTCDCLKLI 84 (175)
T ss_dssp ------------------CCCCEEEEEEEEEEEEECSCCSTHHHHHHHHHHHHHHHHTT--CCCCEEEEEEECSSEEEEE
T ss_pred cccccCCccCCCCCCCccccccceEEEEcceEEEecCCCCHHHHHHHHHHHHHhhcccc--cccCCEEEEEEECCeEEEE
Confidence 4445677788999998888899999999999999999999988764 444444333222 2357899999999999999
Q ss_pred eCCccceeeccccceeeeEEecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccc-hhhHHhhcchhhHHHHHHH
Q psy5022 86 NTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE-AQFIAQSIGQAFQVAYMEF 164 (359)
Q Consensus 86 ~~~t~~~~~~~~l~~IS~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~-a~~i~~~ig~af~~ay~~~ 164 (359)
|.+|++++++|+|++||||+++++ ++|.|+||++...+.....+++.||||+|++ |++|+.+|||||++||++|
T Consensus 85 d~~tk~~i~~~~i~~ISfca~d~~-----d~r~FafIar~~~~~~~~~~~~~CHVF~~~~~A~~I~~tIgqAF~~ay~~~ 159 (175)
T 2ela_A 85 DPQTQVTRLTFPLPCVVLYATHQE-----NKRLFGFVLRTSSGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAE 159 (175)
T ss_dssp CTTTCCEEEEEEGGGEEEEEEETT-----EEEEEEEEEEEC-------CEEEEEEEEESSCHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCcEEEEeecCEEEEEEeCCC-----CCcEEEEEEecCccccCCCcceEEEEEEcchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988 8899999975421111135789999999997 9999999999999999999
Q ss_pred HHhcC
Q psy5022 165 LKANG 169 (359)
Q Consensus 165 L~~~g 169 (359)
|+.++
T Consensus 160 l~~~~ 164 (175)
T 2ela_A 160 LDRRA 164 (175)
T ss_dssp HCC--
T ss_pred HHhhH
Confidence 98763
No 5
>2ej8_A DCC-interacting protein 13 alpha; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.84A {Homo sapiens}
Probab=99.98 E-value=1.7e-32 Score=233.06 Aligned_cols=140 Identities=20% Similarity=0.286 Sum_probs=109.2
Q ss_pred CcCCCCcEEEEeeeEEEEeccCCChhhHHH-HHHHHHHHhCCCCCCCCCcEEEEEEECCeeEEEeCCccceeecccccee
Q psy5022 23 TGLGPGTLFRLKFLGSVQVDEDDPKCCKRR-VKKVMVEEAAPEGETQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTI 101 (359)
Q Consensus 23 ~~l~~gv~f~~kylGs~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~l~iS~~gi~~~~~~t~~~~~~~~l~~I 101 (359)
+..+.++.|.||||||++|..++|..+++. ++++...++... ..++++|.|.||++||+|+|.+|++++++|+|++|
T Consensus 10 ~~~~~~~~f~vkYLGs~eV~~~~g~~~~~~Ai~~l~~~~~~~~--~~~~~~v~L~VS~~gi~l~d~~tk~~~~~~~i~~I 87 (160)
T 2ej8_A 10 EDSILHQLFIVRFLGSMEVKSDDHPDVVYETMRQILAARAIHN--IFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCV 87 (160)
T ss_dssp TTCSCEEEEEEEEEEEEEECCCSCTHHHHHHHHHHHHHHHHTT--CCCCCEEEEEEESSEEEEECTTTCCEEEEEEGGGE
T ss_pred cccccccEEEEEeeeEEEeCCCCCHHHHHHHHHHHHHhhcccc--cCcCCEEEEEEECCeEEEEeCCCCeEEEEeeCCeE
Confidence 344568999999999999999899888764 455444333222 23578999999999999999999999999999999
Q ss_pred eeEEecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccc-hhhHHhhcchhhHHHHHHHHHhcC
Q psy5022 102 SYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE-AQFIAQSIGQAFQVAYMEFLKANG 169 (359)
Q Consensus 102 S~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~-a~~i~~~ig~af~~ay~~~L~~~g 169 (359)
|||++|++ ++|.|+||++..++.....+++.||||+|++ |+.|+.+|||||++||++||+.++
T Consensus 88 Sfca~d~~-----~~r~FafIar~~~~~~~~~~~~~CHVF~~~~~A~~I~~tigqAF~~ay~~~l~~~~ 151 (160)
T 2ej8_A 88 VLYATHQE-----NKRLFGFVLRTSSGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA 151 (160)
T ss_dssp EEEEEETT-----EEEEEEEEEEECC------CEEEEEEEEESSCHHHHHHHHHHHHHHHHHHC-----
T ss_pred EEEEecCC-----CCeEEEEEEecCCcccCCCccEEEEEEEcchhHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 99999988 8899999975421111135789999999997 999999999999999999998773
No 6
>1ntv_A Disabled homolog 1; beta-sandwich, signaling protein; 1.50A {Mus musculus} SCOP: b.55.1.2 PDB: 1nu2_A* 1oqn_A*
Probab=99.97 E-value=7.7e-31 Score=220.99 Aligned_cols=133 Identities=20% Similarity=0.189 Sum_probs=110.3
Q ss_pred cccCcCCC-----CcEEEEeeeEEEEeccCCChhhHHHH-HHHHHHH--hCCCCCCCCCcEEEEEEECCeeEEEeCCccc
Q psy5022 20 VVDTGLGP-----GTLFRLKFLGSVQVDEDDPKCCKRRV-KKVMVEE--AAPEGETQPSTEVDLFISTEKIMVLNTDLKE 91 (359)
Q Consensus 20 ~~~~~l~~-----gv~f~~kylGs~~V~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~v~l~iS~~gi~~~~~~t~~ 91 (359)
+.++.|++ |++|.+|||||++|..++|+.+++.+ +++.... ++..+. +.++|.|+||++||+|+|.+|++
T Consensus 4 ~~~~~L~~~~~g~gv~f~vkYLGs~eV~~~~g~~v~~eA~~~i~~~~~~~k~~~~--~~~~v~L~IS~~GI~v~d~~tk~ 81 (152)
T 1ntv_A 4 RSEATLIKRFKGEGVRYKAKLIGIDEVSAARGDKLCQDSMMKLKGVVAGARSKGE--HKQKIFLTISFGGIKIFDEKTGA 81 (152)
T ss_dssp CCHHHHHHHHSTTCEEEEEEEEEEEECSSSCCHHHHHHHHHHHHHHHHHHHTTTC--CCEEEEEEEETTEEEEEETTTCC
T ss_pred CCHHHHHHhhcCCCcEEEEEeCCeEEecCCCCchHHHHHHHHHHHHHhhhhccCC--CCCEEEEEEECCeEEEEECCCCc
Confidence 44566776 99999999999999999999987654 4444322 122333 35799999999999999999999
Q ss_pred eeeccccceeeeEEecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccc-hhhHHhhcchhhHHHHHHHHH
Q psy5022 92 IMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE-AQFIAQSIGQAFQVAYMEFLK 166 (359)
Q Consensus 92 ~~~~~~l~~IS~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~-a~~i~~~ig~af~~ay~~~L~ 166 (359)
++++|+|++||||++|++ ++|.|+||++. + ..+.||+|+|.+ |++|+++|||||++||+.+.+
T Consensus 82 ~~~~~~l~~ISf~a~d~~-----d~r~FafI~k~-----~--~~h~f~v~~s~~~A~~I~~tigqAF~~ay~~~~~ 145 (152)
T 1ntv_A 82 LQHHHAVHEISYIAKDIT-----DHRAFGYVCGK-----E--GNHRFVAIKTAQAAEPVILDLRDLFQLIYELKQR 145 (152)
T ss_dssp EEEEECGGGEEEEEECTT-----CTTEEEEEESS-----T--TCCEEEEEEESSCSHHHHHHHHHHHHHHHHHHHT
T ss_pred eEeeeecCcEEEEeCCCC-----CCcEEEEEEEc-----C--CeEEEEEEccHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999887 88999999643 2 247899999876 999999999999999999875
No 7
>1p3r_A Disabled homolog 2; PTB, signaling protein; 2.10A {Mus musculus} SCOP: b.55.1.2 PDB: 1m7e_A
Probab=99.97 E-value=7.7e-30 Score=216.58 Aligned_cols=129 Identities=19% Similarity=0.215 Sum_probs=108.1
Q ss_pred CCCcEEEEeeeEEEEeccCCChhhHHHH-HHHHHHH--hCCCCCCCCCcEEEEEEECCeeEEEeCCccceeeccccceee
Q psy5022 26 GPGTLFRLKFLGSVQVDEDDPKCCKRRV-KKVMVEE--AAPEGETQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTIS 102 (359)
Q Consensus 26 ~~gv~f~~kylGs~~V~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~v~l~iS~~gi~~~~~~t~~~~~~~~l~~IS 102 (359)
.+|+.|.||||||++|..++|+.+++.+ +++.... ++..+ .+.++|.|.||++||+|+|.+|++++++|+|++||
T Consensus 14 ~~gv~f~vkYLGs~~V~~~~g~~~~~eA~~~i~~~~~~~k~~~--~~~~~V~L~IS~~GI~v~d~~tk~~~~~~~l~~IS 91 (160)
T 1p3r_A 14 GDGVKYKAKLIGIDDVPDARGDKMSQDSMMKLKGMAAAGRSQG--QHKQRIWVNISLSGIKIIDEKTGVIEHEHPVNKIS 91 (160)
T ss_dssp TTCEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHHTTT--CCCEEEEEEEETTEEEEEETTTCCEEEEECGGGEE
T ss_pred CCCeEEEEEeceeEEecCCCChHHHHHHHHHHHHHHhhhhccC--CCCCEEEEEEECCeEEEEECCCCeEEEecccCeEE
Confidence 4589999999999999999999887644 4443321 12222 34679999999999999999999999999999999
Q ss_pred eEEecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccc-hhhHHhhcchhhHHHHHHHHHhc
Q psy5022 103 YIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE-AQFIAQSIGQAFQVAYMEFLKAN 168 (359)
Q Consensus 103 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~-a~~i~~~ig~af~~ay~~~L~~~ 168 (359)
||++|+. +++.|+||++ ++ ..+.||+|++++ |++|+.+|||||++||+.+.+..
T Consensus 92 fca~d~~-----d~r~FafI~k-----~~--~~h~c~vf~s~~~A~~I~~tigqAF~~ay~~~~~~~ 146 (160)
T 1p3r_A 92 FIARDVT-----DNRAFGYVCG-----GE--GQHQFFAIKTGQQAEPLVVDLKDLFQVIYNVKKKEE 146 (160)
T ss_dssp EEEECTT-----CTTEEEEEES-----ST--TCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-----CCcEEEEEEe-----cC--CEEEEEEEccHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 9999887 8899999964 22 578999999876 99999999999999999998654
No 8
>3so6_A LDL receptor adaptor protein; PTB, endocytic adaptor, autosomal reces hypercholesterolemia, ARH, cholesterol; 1.37A {Rattus norvegicus}
Probab=99.96 E-value=2.8e-29 Score=208.45 Aligned_cols=130 Identities=22% Similarity=0.334 Sum_probs=109.1
Q ss_pred CCCcEEEEeeeEEEEeccCCChhhHHHH-HHHHHHHhCCCCCCCCCcEEEEEEECCeeEEEeCCccceeeccccceeeeE
Q psy5022 26 GPGTLFRLKFLGSVQVDEDDPKCCKRRV-KKVMVEEAAPEGETQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYI 104 (359)
Q Consensus 26 ~~gv~f~~kylGs~~V~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~l~iS~~gi~~~~~~t~~~~~~~~l~~IS~~ 104 (359)
++|++|.|+||||++|..++|..+++.+ +++....+. .+ .++++|.|.||.+||+++|.+|++++++|+|++||||
T Consensus 1 ~~g~~f~v~YLGs~~v~~~~g~~~~~~Av~~l~~~~k~-~~--~~~~~v~L~Vs~~gi~l~d~~~~~~~~~~~i~~Isf~ 77 (137)
T 3so6_A 1 MEGMVFSLKYLGMTLVERPKGEELSAAAVKRIVATAKA-SG--KKLQKVTLKVSPRGIILTDSLTSQLIENVSIYRISYC 77 (137)
T ss_dssp CCCEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHHHHH-TC--SCCEEEEEEEETTEEEEEETTTCCEEEEEEGGGEEEE
T ss_pred CCccEEEEEEeeEEEecCCCChhHHHHHHHHHHHHhhc-cC--CCCCEEEEEEeCCeEEEEECCCCcEEEeeccCEEEEE
Confidence 5899999999999999999999987654 444332111 12 2577999999999999999999999999999999999
Q ss_pred EecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccc---hhhHHhhcchhhHHHHHHHHHhc
Q psy5022 105 ADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE---AQFIAQSIGQAFQVAYMEFLKAN 168 (359)
Q Consensus 105 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~---a~~i~~~ig~af~~ay~~~L~~~ 168 (359)
+.+++ +.+.|+||++ ++....+.||||+|++ |++|+.+|||||++||++|.++.
T Consensus 78 ~~d~~-----~~~~FafI~r-----~~~~~~~~CHvF~c~~~~~A~~i~~~l~~AF~~a~~~~q~~~ 134 (137)
T 3so6_A 78 TADKM-----HDKVFAYIAQ-----SQQNESLECHAFLCTKRKVAQAVTLTVAQAFKVAFEFWQVSL 134 (137)
T ss_dssp EECSS-----STTEEEEEEE-----CSSSSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EecCC-----CCCEEEEEEE-----cCCCCeEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 98876 6889999964 3445789999999974 99999999999999999988754
No 9
>3dxe_A Amyloid beta A4 protein-binding family B member 1; alzheimer'S disease, APP, AICD, Fe65, PTB domain, alternative splicing, polymorphism, alzheimer disease, apoptosis; 2.00A {Homo sapiens} SCOP: b.55.1.0 PDB: 3dxd_A 3dxc_A
Probab=99.96 E-value=1.8e-29 Score=207.27 Aligned_cols=122 Identities=16% Similarity=0.280 Sum_probs=105.7
Q ss_pred EEEEeeeEEEEeccCCChhhHHH-HHHHHHHHhCCCCCCCCCcEEEEEEECCeeEEEeCCccceeeccccceeeeEEecC
Q psy5022 30 LFRLKFLGSVQVDEDDPKCCKRR-VKKVMVEEAAPEGETQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIG 108 (359)
Q Consensus 30 ~f~~kylGs~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~l~iS~~gi~~~~~~t~~~~~~~~l~~IS~~~~~~ 108 (359)
.|.+|||||++|++++|.+++.+ +++++.. .+..++++|.|.||++||++.|.+|++++.+++|++||||+.+.
T Consensus 9 ~F~vkYLGsv~V~~p~G~~Vl~~Ai~ki~~~-----~~~~~~~~v~l~Vs~~gi~v~~~~t~e~l~~~~i~~ISFcg~~k 83 (140)
T 3dxe_A 9 KFQVYYLGNVPVAKPVGVDVINGALESVLSS-----SSREQWTPSHVSVAPATLTILHQQTEAVLGECRVRFLSFLAVGR 83 (140)
T ss_dssp -CEEEEEEEEEESCSCCHHHHHHHHHHHHHT-----CCGGGCEEEEEEECSSEEEEEETTTCCEEEEEEGGGEEEEEECS
T ss_pred eEeeeecceEEECCCCcHHHHHHHHHHHHhc-----CCcCCCceEEEEEcCCEEEEEecCCcceeeeccEEEEeeeccCC
Confidence 49999999999999999998654 4554432 11335789999999999999999999999999999999999966
Q ss_pred CceEEeeecccccccCCCCCCCCCCCcceeeEeeccc-hhhHHhhcchhhHHHHHHHHHhc
Q psy5022 109 DLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE-AQFIAQSIGQAFQVAYMEFLKAN 168 (359)
Q Consensus 109 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~-a~~i~~~ig~af~~ay~~~L~~~ 168 (359)
+.|.|+||. +++ +++|.||||+|++ |..|+++||+||+++||++|++.
T Consensus 84 ------d~k~FafI~-----~~~-~~~f~CHvF~c~~~A~~vs~aV~~Af~l~Yqk~l~~~ 132 (140)
T 3dxe_A 84 ------DVHTFAFIM-----AAG-PASFCCHMFWCEPNAASLSEAVQAACMLRYQKCLDAR 132 (140)
T ss_dssp ------STTEEEEEE-----EEE-TTEEEEEEEEEESCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------CCcEEEEEe-----cCC-CccEEEEEEecCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 489999995 444 7899999999999 99999999999999999999865
No 10
>1n3h_A SHC transforming protein; free protein, beta sandwich, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.2 PDB: 1oy2_A 2l1c_A* 1shc_A*
Probab=99.96 E-value=4.5e-30 Score=226.07 Aligned_cols=134 Identities=23% Similarity=0.421 Sum_probs=105.3
Q ss_pred cCcC-CCCcEEEEeeeEEEEeccC-------CChhhHHHH-HHHHHHH--hC-CCCC-----------------CCCCcE
Q psy5022 22 DTGL-GPGTLFRLKFLGSVQVDED-------DPKCCKRRV-KKVMVEE--AA-PEGE-----------------TQPSTE 72 (359)
Q Consensus 22 ~~~l-~~gv~f~~kylGs~~V~~~-------~~~~~~~~~-~~~~~~~--~~-~~~~-----------------~~~~~~ 72 (359)
++.| .+||.|.||||||++|.++ .++.+++.+ +++.... .+ .... ..+.++
T Consensus 42 ~~~l~~~gv~f~vkYLGs~eV~~~~r~~~~~~g~~v~~eAi~rv~~~~~~~k~~~~~kk~~~k~~~~~~g~~~~~~~~~~ 121 (207)
T 1n3h_A 42 NDKVMGPGVSYLVRYMGCVEVLQSMRALDFNTRTQVTREAISLVCEAVPGAKGATRRRKPCSRPLSSILGRSNLKFAGMP 121 (207)
T ss_dssp HHHHHTTCEEEEEEEECEEECCCCSSCSSSCCHHHHHHHHHHHHHHHSTTSCSSCCSCCCCCCSSSSCCCEEECSSCSEE
T ss_pred hHHhccCCceEEEEecceEEeccccccCCccchHHHHHHHHHHHHHHhhcccchhhhcccccccchhccCCccccccCce
Confidence 3444 5899999999999999877 677777644 4443321 01 0000 013689
Q ss_pred EEEEEECCeeEEEeCCccceeeccccceeeeEE-ecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccc--hhhH
Q psy5022 73 VDLFISTEKIMVLNTDLKEIMMDHALRTISYIA-DIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE--AQFI 149 (359)
Q Consensus 73 v~l~iS~~gi~~~~~~t~~~~~~~~l~~IS~~~-~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~--a~~i 149 (359)
|.|+||++||+|+|.+|++++++|+|++||||+ ++.+ +.+.|+||++ ++. +++.||||+|.+ |++|
T Consensus 122 V~L~IS~~gIkv~d~~t~~~i~~~~i~~ISf~a~~d~~-----~~~~FafIar-----~~~-~~~~CHVF~cs~~~A~~I 190 (207)
T 1n3h_A 122 ITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPD-----TAEYVAYVAK-----DPV-NQRACHILECPEGLAQDV 190 (207)
T ss_dssp EEEEEETTEEEEEETTTTSCBCCCSCCCCSSSCSSSTT-----SSSCEEEEEC-----CSS-SCCEEEEEECSSSTHHHH
T ss_pred EEEEEECCeEEEEeCCCCceeeeeccceEEEEeccCCC-----cCCEEEEEec-----CCC-CCEEEEEEEcCHHHHHHH
Confidence 999999999999999999999999999999999 7776 6789999964 333 679999999644 9999
Q ss_pred HhhcchhhHHHHHHHHH
Q psy5022 150 AQSIGQAFQVAYMEFLK 166 (359)
Q Consensus 150 ~~~ig~af~~ay~~~L~ 166 (359)
+.+|||||++||++||+
T Consensus 191 ~~tIgqAF~lay~~~L~ 207 (207)
T 1n3h_A 191 ISTIGQAFELRFKQYLR 207 (207)
T ss_dssp HHCCCCCCCCSSSSCCC
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 99999999999999874
No 11
>2ysz_A Amyloid beta A4 precursor protein-binding family B member 2 and amyloid beta A4 protein...; chimera, Fe65L, PID domain, amyloid precursor protein; NMR {Mus musculus}
Probab=99.95 E-value=1.1e-28 Score=210.89 Aligned_cols=137 Identities=15% Similarity=0.228 Sum_probs=114.1
Q ss_pred ccCCCCCCcccCcCCCCcEEEEeeeEEEEeccCCChhhHHH-HHHHHHHHhCCCCCCCCCcEEEEEEECCeeEEEeCCc-
Q psy5022 12 TQALPEDPVVDTGLGPGTLFRLKFLGSVQVDEDDPKCCKRR-VKKVMVEEAAPEGETQPSTEVDLFISTEKIMVLNTDL- 89 (359)
Q Consensus 12 ~~~~~~~~~~~~~l~~gv~f~~kylGs~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~l~iS~~gi~~~~~~t- 89 (359)
.+.+|.|... .-..|.+||||+++|..++|.+++.+ +++++... ...++++|.|.||++||.+.|.++
T Consensus 4 ~~~~p~p~~e-----~~~~F~vkYLGsv~V~~p~G~dV~~~Ai~kl~~~~-----~~~k~~~V~L~VS~~gI~v~d~~t~ 73 (185)
T 2ysz_A 4 GSSGPTPKTE-----LVQKFRVQYLGMLPVDRPVGMDTLNSAIENLMTSS-----SKEDWPSVNMNVADATVTVISEKNE 73 (185)
T ss_dssp CCCCCCCCCC-----CCEEEEEEEEEEEEESSSSCHHHHHHHHHHHHHHS-----CTTTSCEEEEEEETTEEEEEESSCS
T ss_pred CCcCCCCCcC-----cceEEEEEecCcEEecCCCcHHHHHHHHHHHHhcc-----ccccCceEEEEEecCEEEEEecCCC
Confidence 3456665554 23679999999999999999998764 45544431 123478999999999999999998
Q ss_pred cceeeccccceeeeEEecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccc-hhhHHhhcchhhHHHHHHHHHhc
Q psy5022 90 KEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE-AQFIAQSIGQAFQVAYMEFLKAN 168 (359)
Q Consensus 90 ~~~~~~~~l~~IS~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~-a~~i~~~ig~af~~ay~~~L~~~ 168 (359)
++++.+++|++||||+.+. ++|.|+||+ +++ .++|.||||+|++ |++|+.+||+||+++||++|+++
T Consensus 74 ~e~l~~~~I~~ISFc~vd~------d~k~FaFI~-----~~~-~~~f~CHVF~c~k~A~~vs~aV~~Af~l~yQk~l~~~ 141 (185)
T 2ysz_A 74 EEVLVECRVRFLSFMGVGK------DVHTFAFIM-----DTG-NQRFECHVFWCEPNAANVSEAVQAACSGPSSGIEGRG 141 (185)
T ss_dssp SCEEEEECTTTCCEEECCS------STTEEEEEE-----ESS-SSCEEEEEEEESSCSTTHHHHHHHHHHSCCCCCCCCC
T ss_pred cceeeeccEEEeeeeccCC------CCcEEEEEe-----cCC-CccEEEEEEEccCchHHHHHHHHHHHHHHHHHhhccC
Confidence 5899999999999999875 588999995 445 7899999999999 99999999999999999999988
Q ss_pred CC
Q psy5022 169 GI 170 (359)
Q Consensus 169 gi 170 (359)
+.
T Consensus 142 ~~ 143 (185)
T 2ysz_A 142 SS 143 (185)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 12
>1wgu_A APBB2, amyloid beta (A4) precursor protein-bindin, family B, member 2; phosphotyrosine-interaction domain, amyloid disease, structural genomics; NMR {Mus musculus} SCOP: b.55.1.2 PDB: 2roz_B
Probab=99.95 E-value=2.4e-28 Score=199.95 Aligned_cols=129 Identities=16% Similarity=0.256 Sum_probs=106.9
Q ss_pred ccCCCCCCcccCcCCCCcEEEEeeeEEEEeccCCChhhHHH-HHHHHHHHhCCCCCCCCCcEEEEEEECCeeEEEeCCc-
Q psy5022 12 TQALPEDPVVDTGLGPGTLFRLKFLGSVQVDEDDPKCCKRR-VKKVMVEEAAPEGETQPSTEVDLFISTEKIMVLNTDL- 89 (359)
Q Consensus 12 ~~~~~~~~~~~~~l~~gv~f~~kylGs~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~l~iS~~gi~~~~~~t- 89 (359)
.+.+|.|... .-..|.+||||+++|+.++|.+++.+ +++++.+ ....++++|.|+||++||.+.|.++
T Consensus 4 ~~~~p~p~~e-----~~~~f~vkyLGsv~V~~p~G~dV~~~Ai~~i~~~-----~~~~~~~~v~l~Vs~~gi~v~~~~~~ 73 (136)
T 1wgu_A 4 GSSGPTPKTE-----LVQKFRVQYLGMLPVDRPVGMDTLNSAIENLMTS-----SSKEDWPSVNMNVADATVTVISEKNE 73 (136)
T ss_dssp CCCCCCSCCC-----CCCCEEEEEEEEEECSCSSCSHHHHHHHHHHHHS-----SCTTTSCEEEEEEETTEEEEECSSCS
T ss_pred CCcCCCCCcC-----CceEEEEEecCcEEcCCCCcHHHHHHHHHHHHhc-----cccccCceEEEEEccCEEEEEecCCC
Confidence 3456666554 23569999999999999999998654 4555442 1223478999999999999999998
Q ss_pred cceeeccccceeeeEEecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccc-hhhHHhhcchhhHHHHH
Q psy5022 90 KEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE-AQFIAQSIGQAFQVAYM 162 (359)
Q Consensus 90 ~~~~~~~~l~~IS~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~-a~~i~~~ig~af~~ay~ 162 (359)
++++.+++|++||||+.+. ++|.|+||. +++ +++|.||||+|++ |.+|+++||+||+++|+
T Consensus 74 ~~~l~~~~l~~ISFc~~d~------~~k~FaFI~-----~~~-~~~f~CHvF~c~~~A~~vs~aV~~A~~l~Y~ 135 (136)
T 1wgu_A 74 EEVLVECRVRFLSFMGVGK------DVHTFAFIM-----DTG-NQRFECHVFWCEPNAANVSEAVQAACSGPSS 135 (136)
T ss_dssp SCEEEEEETTTEEEEEECS------STTCEEEEE-----ECS-SSCEEEEEEECSSCTHHHHHHHHHHHCCCCC
T ss_pred CceeccceEEEeeeEecCC------CCcEEEEEE-----cCC-CccEEEEEEEcCcchHHHHHHHHHHHHhhcC
Confidence 5999999999999999874 589999995 445 7889999999999 99999999999999995
No 13
>3f0w_A NUMB-R, NUMB-like protein; PH domain-like, PID domain, phosphoprotein, signaling protei structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens} PDB: 1wj1_A 2nmb_A* 1ddm_A
Probab=99.95 E-value=3.4e-28 Score=208.28 Aligned_cols=131 Identities=21% Similarity=0.371 Sum_probs=109.9
Q ss_pred ccCcCCCCc-EEEEeeeEEEEeccCCChhhHHHHHHHHHHHhCCCCCCCCCcEEEEEEECCeeEEEeCCccceeeccccc
Q psy5022 21 VDTGLGPGT-LFRLKFLGSVQVDEDDPKCCKRRVKKVMVEEAAPEGETQPSTEVDLFISTEKIMVLNTDLKEIMMDHALR 99 (359)
Q Consensus 21 ~~~~l~~gv-~f~~kylGs~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~iS~~gi~~~~~~t~~~~~~~~l~ 99 (359)
.++.|+.|+ .|.|+||||++|..++|..+++.+.+.+.. . + .+.++|.|.||.+||+++|.+|++++++|+|+
T Consensus 33 ~~e~l~~g~~~f~vkYLGs~~V~~~~g~~~~~~Ai~~lk~---~-~--~k~~~V~L~VS~~GI~l~d~~t~~~l~~~~i~ 106 (168)
T 3f0w_A 33 DEDAVRKGTCSFPVRYLGHVEVEESRGMHVCEDAVKKLKA---M-G--RKSVKSVLWVSADGLRVVDDKTKDLLVDQTIE 106 (168)
T ss_dssp HHHHHHTTCEEEEEEEEEEEEESCSCCHHHHHHHHHHHHT---T-C----CEEEEEEECSSEEEEEETTTCCEEEEEEGG
T ss_pred CHHHHhCCceEEEEEEeeEEEECCCCCHHHHHHHHHHHHh---c-C--CCCcEEEEEEECCEEEEEeCCCCeEEEeeecC
Confidence 367788896 899999999999999999887644333321 1 2 24689999999999999999999999999999
Q ss_pred eeeeEEecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccc--hhhHHhhcchhhHHHHHHHHHh
Q psy5022 100 TISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE--AQFIAQSIGQAFQVAYMEFLKA 167 (359)
Q Consensus 100 ~IS~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~--a~~i~~~ig~af~~ay~~~L~~ 167 (359)
+||||+++++ +.+.|+||+ +++...++.||||+|++ |+.|+.+|||||++||+++.+.
T Consensus 107 ~ISf~~~d~~-----~~~~FafIa-----r~~~~~~~~CHvF~c~~~~A~~I~~aIgqAF~~a~~~kqk~ 166 (168)
T 3f0w_A 107 KVSFCAPDRN-----LDKAFSYIC-----RDGTTRRWICHCFLALKDSGERLSHAVGCAFAACLERKQRR 166 (168)
T ss_dssp GEEEEEECSS-----CTTEEEEEE-----EETTTTEEEEEEEEESSSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cEEEEecCCC-----CCcEEEEEE-----ecCCCCcEEEEEEEeccchHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999998877 788999995 44556789999999965 9999999999999999998763
No 14
>2dyq_A Amyloid beta A4 precursor protein-binding family 3; phosphotyrosine-interaction domain (PTB/PID alzheimer'S disease, structural genomics, NPPSFA; 3.10A {Homo sapiens}
Probab=99.95 E-value=6.7e-28 Score=197.67 Aligned_cols=121 Identities=13% Similarity=0.160 Sum_probs=102.3
Q ss_pred cEEEEeeeEEEEeccCCChhhHHH-HHHHHHHHhCCCCCCCCCcEEEEEEECCeeEEEeC-----Cccceeeccccceee
Q psy5022 29 TLFRLKFLGSVQVDEDDPKCCKRR-VKKVMVEEAAPEGETQPSTEVDLFISTEKIMVLNT-----DLKEIMMDHALRTIS 102 (359)
Q Consensus 29 v~f~~kylGs~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~l~iS~~gi~~~~~-----~t~~~~~~~~l~~IS 102 (359)
..|.+|||||++|..++|.++... +++++.. ....+|++|.|+||++||++++. ++++++.++++|+||
T Consensus 16 ~~f~~kyLGsv~V~~~~G~dVln~Ai~~l~~~-----~~~~~w~~v~l~Vs~~~i~v~~~~~~~~~~~~~l~~c~vr~IS 90 (144)
T 2dyq_A 16 QKYEALYMGTLPVTKAMGMDVLNEAIGTLTAR-----GDRNAWVPTMLSVSDSLMTAHPIQAEASTEEEPLWQCPVRLVT 90 (144)
T ss_dssp CCCEEEEEEEEEESSSCCHHHHHHHHHHHHCC-----CSSCCCEEEEEEECSSEEEEEECC------CCCSSEEEGGGEE
T ss_pred hEEEEEEeccEEecCccCHHHHHHHHHHHHhc-----CCcccCcceEEEEeccceEEeccccccccccceeeeceEEEEe
Confidence 469999999999999999998654 4444221 22335889999999999999998 589999999999999
Q ss_pred eEEecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccc-hhhHHhhcchhhHHHHHHHHH
Q psy5022 103 YIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE-AQFIAQSIGQAFQVAYMEFLK 166 (359)
Q Consensus 103 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~-a~~i~~~ig~af~~ay~~~L~ 166 (359)
||+.+. +.|.|+||. ++..++|.||||+|++ |.+|+.+||+||+++||++|+
T Consensus 91 Fcgvgk------d~r~FaFI~------~~~~~~f~CHVF~ce~~A~~ls~aV~~Ac~l~Yqk~l~ 143 (144)
T 2dyq_A 91 FIGVGR------DPHTFGLIA------DLGRQSFQCAAFWCQPHAGGLSEAVQAACMVQYQKCLV 143 (144)
T ss_dssp EEEECS------STTEEEEEE------ECSSSCEEEEEEECSSCTHHHHHHHHHHHHHHHHHHHC
T ss_pred eeecCC------CCcEEEEEE------eCCCCcEEEEEEecCCchHHHHHHHHHHHHHHHHHHhc
Confidence 999955 589999995 3456899999999999 999999999999999999986
No 15
>2yt0_A Amyloid beta A4 protein and amyloid beta A4 precursor protein-binding family B member...; chimera, Fe65L, PID domain, amyloid precursor protein; NMR {Mus musculus} PDB: 2yt1_A
Probab=99.90 E-value=7.7e-24 Score=179.56 Aligned_cols=116 Identities=16% Similarity=0.294 Sum_probs=97.6
Q ss_pred CCCC-cEEEEeeeEEEEeccCCChhhHHH-HHHHHHHHhCCCCCCCCCcEEEEEEECCeeEEEeCCc-cceeecccccee
Q psy5022 25 LGPG-TLFRLKFLGSVQVDEDDPKCCKRR-VKKVMVEEAAPEGETQPSTEVDLFISTEKIMVLNTDL-KEIMMDHALRTI 101 (359)
Q Consensus 25 l~~g-v~f~~kylGs~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~l~iS~~gi~~~~~~t-~~~~~~~~l~~I 101 (359)
+.++ ..|.+||||+++|..++|.+++.+ +++++.+. ...++++|.|.||++||.+.+.+| ++++.+++|++|
T Consensus 57 ~~e~~~~F~vkYLGsv~V~~p~G~dVl~~AI~kl~~~~-----~~~~~~~V~L~VS~~gI~v~d~~t~~evl~~c~l~~I 131 (176)
T 2yt0_A 57 KTELVQKFRVQYLGMLPVDRPVGMDTLNSAIENLMTSS-----SKEDWPSVNMNVADATVTVISEKNEEEVLVECRVRFL 131 (176)
T ss_dssp CCSCCCEEEEEEEEEEECSCSSCHHHHHHHHHHHHHHS-----CTTTSCEEEEECGGGEEEEEESSCTTCEEEEEETTTC
T ss_pred ccccceEEEEEccCceEccCCccHHHHHHHHHHHHhcc-----CcccCcceEEEEcCCEEEEEecCCCcceecccceEEe
Confidence 3344 689999999999999999999764 45554431 123478999999999999999998 599999999999
Q ss_pred eeEEecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccc-hhhHHhhcchhh
Q psy5022 102 SYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE-AQFIAQSIGQAF 157 (359)
Q Consensus 102 S~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~-a~~i~~~ig~af 157 (359)
|||+.+. ++|.|+||. +++ .++|.||||+|++ |.+|+.+||.|.
T Consensus 132 SFcgvd~------d~k~FaFI~-----~~~-~~~f~CHVF~cek~A~~ls~aI~aAc 176 (176)
T 2yt0_A 132 SFMGVGK------DVHTFAFIM-----DTG-NQRFECHVFWCEPNAANVSEAVQAAC 176 (176)
T ss_dssp CEEEECS------STTEEEEEE-----EEE-TTEEEEEEEEESSCSHHHHHHHHHHC
T ss_pred eeEccCC------CCcEEEEEE-----eCC-CCCEEEEEEEccCChhHHHHHHHhhC
Confidence 9999975 589999995 445 7899999999999 999999999884
No 16
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.87 E-value=5.1e-21 Score=167.41 Aligned_cols=154 Identities=22% Similarity=0.343 Sum_probs=120.4
Q ss_pred cccEEEEeeCCCCCccceEEEecCCC---CcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHh-hc
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWG---SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEF-LK 272 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g---~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~-~~ 272 (359)
...+++.|.|.. ++|||++.++... ....+++|..|.|+|||+++|+|++||+|++|||+++.+ .... ..
T Consensus 4 ~~~~~v~l~~~~-~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 82 (196)
T 3gsl_A 4 MEYEEITLERGN-SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKE 82 (196)
T ss_dssp EEEEEEEEECBT-TBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred cEEEEEEEEECC-CCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 345689999985 5899999864211 123578999999999999999999999999999999876 2222 23
Q ss_pred CCCeEEEEEEeCcce-----E-EeeccccccCcEEeccccc-----ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEE
Q psy5022 273 ANGIEDHSFVKEMDY-----Q-EVLNSQEIFGDELQMFAKK-----ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQS 340 (359)
Q Consensus 273 ~~~~v~l~v~~~~~~-----~-~~~~~~~~~G~~~~~~~~~-----~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~ 340 (359)
.+..++|++.|.... . .+.+...++||.+.+.... ..+.+|.+|.++|||+++| |++||+|++|||++
T Consensus 83 ~g~~v~l~v~r~~~~~~~~~~v~l~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~ 162 (196)
T 3gsl_A 83 AGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVG 162 (196)
T ss_dssp SCSEEEEEEEEECCCCEEEEEEEEEEBTTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEE
T ss_pred CCCcEEEEEEecCCCccccEEEEEecCCCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCc
Confidence 467899999875321 1 1234556899998764322 2357999999999999988 99999999999999
Q ss_pred CCCCCHHHHHHHHHhc
Q psy5022 341 VVAVPHEKIVNLLATS 356 (359)
Q Consensus 341 v~~~~~~~~v~~l~~s 356 (359)
+.++++++++++|+++
T Consensus 163 v~~~~~~~~~~~l~~~ 178 (196)
T 3gsl_A 163 LEDVMHEDAVAALKNT 178 (196)
T ss_dssp CSSCBHHHHHHHHHSC
T ss_pred CCCCCHHHHHHHHHcC
Confidence 9999999999999864
No 17
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.84 E-value=5.6e-20 Score=162.44 Aligned_cols=155 Identities=17% Similarity=0.231 Sum_probs=119.4
Q ss_pred hhcccccEEEEeeCCCCCccceEEEecCCCCcC-CcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-------HHH
Q psy5022 198 FAKKELQKEVVVPKAKGEILGVVIVESGWGSML-PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-------YME 269 (359)
Q Consensus 198 ~~~~~~~~~v~l~r~~~~~lG~~i~~~~~g~~~-~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-------~~~ 269 (359)
+..+....++.+.|. +++|||++.++ .+... .+++|..|.++|||+++|+|+.||+|++|||+++.+ .+.
T Consensus 13 ~~~~~~~~~v~~~~~-~~~lG~~i~~g-~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~ 90 (206)
T 3r0h_A 13 EIKPNKKILIELKVE-KKPMGVIVCGG-KNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQ 90 (206)
T ss_dssp CCCTTSCEEEEEECT-TSCCCEEEECC-SSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHH
T ss_pred CCCCCCEEEEEEEeC-CCCcCEEEecc-cCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHH
Confidence 344555667889887 46999999853 22222 478999999999999998899999999999998765 233
Q ss_pred hhc-CCCe-EEEEEEeCcce-----EEe-ec-cccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCE
Q psy5022 270 FLK-ANGI-EDHSFVKEMDY-----QEV-LN-SQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQ 339 (359)
Q Consensus 270 ~~~-~~~~-v~l~v~~~~~~-----~~~-~~-~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~ 339 (359)
.++ .+.. +.|+|.|.... ... .+ ...++||.+.. ...+.+|.+|.++|+|+++| |++||+|++|||+
T Consensus 91 ~~~~~~~~~v~l~v~R~~~~~~~~~~v~l~~~~~~~lG~~~~~---~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~ 167 (206)
T 3r0h_A 91 LFHTTYEKAVTLTVFRADPPELEKFNVDLMKKAGKELGLSLSP---NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGD 167 (206)
T ss_dssp HHHSCCSSEEEEEEECCSSCCEEEEEEEEECCTTCCCCEEEEE---CSSCEEEEEECTTSCHHHHHHCCTTCEEEEETTE
T ss_pred HHHhcCCCceEEEEEecccCCCcEEEEEEecCCCCccCeEEEc---CCceEEEEEECCCChHHHcCCCCCCCEEEEECCE
Confidence 333 3345 89999876431 111 12 34678998874 23468999999999999988 9999999999999
Q ss_pred ECCCCCHHHHHHHHHhcc
Q psy5022 340 SVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 340 ~v~~~~~~~~v~~l~~s~ 357 (359)
++.++++++++.++++..
T Consensus 168 ~v~~~~~~~~~~~l~~~~ 185 (206)
T 3r0h_A 168 ALEGLPFQVCYALFKGAN 185 (206)
T ss_dssp ECTTCCHHHHHHHHHTCC
T ss_pred ECCCCCHHHHHHHHHcCC
Confidence 999999999999998753
No 18
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.83 E-value=1.6e-19 Score=158.42 Aligned_cols=153 Identities=20% Similarity=0.342 Sum_probs=120.9
Q ss_pred cEEEEeeCCCCCccceEEEecCCCC--cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH--------HHHhhcC
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGS--MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--------YMEFLKA 273 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~--~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--------~~~~~~~ 273 (359)
.++|.|.|....+|||.+.++.... ...+++|..|.++|||+++|+|++||+|++|||+++.+ +++....
T Consensus 7 ~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 86 (196)
T 1p1d_A 7 TTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSI 86 (196)
T ss_dssp EEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCS
T ss_pred EEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4578999987789999999753211 23578999999999999999999999999999999873 3343333
Q ss_pred CCeEEEEEEeCcc---------eEEee--ccccccCcEEeccccc--ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCE
Q psy5022 274 NGIEDHSFVKEMD---------YQEVL--NSQEIFGDELQMFAKK--ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQ 339 (359)
Q Consensus 274 ~~~v~l~v~~~~~---------~~~~~--~~~~~~G~~~~~~~~~--~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~ 339 (359)
+..++|.+.|+.. ..... +....+||.+...... ..+.+|.+|.++|||+++| |++||+|++|||+
T Consensus 87 g~~v~l~v~R~~~~~~~~~~~~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~ 166 (196)
T 1p1d_A 87 TSKVTLEIEFDVAESVIPSSGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNI 166 (196)
T ss_dssp SSEEEEEEEECSCSCCBCCSSCEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTE
T ss_pred CCeEEEEEEecCCCCCCCCCCcEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCE
Confidence 6689999987642 11111 2345789998753221 2467999999999999999 9999999999999
Q ss_pred ECCCCCHHHHHHHHHhc
Q psy5022 340 SVVAVPHEKIVNLLATS 356 (359)
Q Consensus 340 ~v~~~~~~~~v~~l~~s 356 (359)
++.+++++++.++|+++
T Consensus 167 ~v~~~~~~~~~~~l~~~ 183 (196)
T 1p1d_A 167 RLDSCSMEDAVQILQQC 183 (196)
T ss_dssp EGGGCCHHHHHHHHHHC
T ss_pred ECCCCCHHHHHHHHHhC
Confidence 99998899999999876
No 19
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.82 E-value=6.6e-19 Score=154.95 Aligned_cols=149 Identities=23% Similarity=0.339 Sum_probs=117.8
Q ss_pred cEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhc-CCCCCCCEEEEECCccHHH-----HHHhh-cCCCe
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARC-GQLNIGDQIIAVNGVSLVA-----YMEFL-KANGI 276 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~-G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~~ 276 (359)
.+.+.+.|..+++|||++.++. . ...+++|..|.++|||+++ | |++||+|++|||+++.+ +...+ ..+..
T Consensus 8 ~~~v~l~~~~~~~lG~~i~~~~-~-~~~~~~V~~v~~~spA~~agg-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 84 (200)
T 2qt5_A 8 STVVELMKKEGTTLGLTVSGGI-D-KDGKPRVSNLRQGGIAARSDQ-LDVGDYIKAVNGINLAKFRHDEIISLLKNVGER 84 (200)
T ss_dssp EEEEEEECCTTCCCCEEEECCT-T-SSSCSEEEEECTTSHHHHTTS-CCTTCEEEEETTEECTTSCHHHHHHHHHTCCSE
T ss_pred CEEEEEEeCCCCCCCEEEeccc-C-CCCCeEEEEECCCChHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 4568888887889999998532 1 1246799999999999999 7 99999999999999876 33333 24568
Q ss_pred EEEEEEeCcc-------------eEEe-eccccccCcEEeccccc----ccCcEEEEEcCCChhhcCC-CCCCCEEEEEC
Q psy5022 277 EDHSFVKEMD-------------YQEV-LNSQEIFGDELQMFAKK----ELQKEICSLLRGGIAERGG-VRVGHRIIEIN 337 (359)
Q Consensus 277 v~l~v~~~~~-------------~~~~-~~~~~~~G~~~~~~~~~----~~~~~I~~v~~gs~A~~~g-L~~GD~Il~IN 337 (359)
+.|.+.|+.. .... .+....|||.+.++... ..+.+|.+|.++|||+++| |++||+|++||
T Consensus 85 v~l~v~R~~~~~~~~g~~~~~~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~in 164 (200)
T 2qt5_A 85 VVLEVEYELPPVSIQGSSVMFRTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVD 164 (200)
T ss_dssp EEEEEEEECCCCCCCCSSEEEEEEEEEEECBTTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEET
T ss_pred EEEEEeccCCCcccCCCccceeEEEEEEecCCCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEEC
Confidence 9999987531 1111 24557799998765322 2366899999999999998 99999999999
Q ss_pred CEECCCCCHHHHHHHHHh
Q psy5022 338 NQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 338 g~~v~~~~~~~~v~~l~~ 355 (359)
|+++.+++++++.++|++
T Consensus 165 g~~v~~~~~~~~~~~l~~ 182 (200)
T 2qt5_A 165 GIRLLGTTHAEAMSILKQ 182 (200)
T ss_dssp TEECTTCCHHHHHHHHHT
T ss_pred CEECCCCCHHHHHHHHHc
Confidence 999999999999999987
No 20
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.78 E-value=1.4e-17 Score=142.24 Aligned_cols=140 Identities=21% Similarity=0.315 Sum_probs=111.6
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH----HH-Hh--hcCCC
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA----YM-EF--LKANG 275 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~----~~-~~--~~~~~ 275 (359)
..+++.+.|.....||+.+... ..+++|..|.++|||+++| |++||+|++|||+++.+ +. .. ...+.
T Consensus 4 ~~r~v~l~k~~~~~lG~~~~~~-----~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~ 77 (166)
T 1w9e_A 4 DPREVILCKDQDGKIGLRLKSI-----DNGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGE 77 (166)
T ss_dssp CCEEEEEECCTTSCCSEEEEEE-----TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSS
T ss_pred CCEEEEEEeCCCCcEeEEEEeC-----CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCC
Confidence 4678999997777999999853 2478999999999999999 99999999999999876 11 22 22456
Q ss_pred eEEEEEEeC-cceEEee--ccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHH
Q psy5022 276 IEDHSFVKE-MDYQEVL--NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNL 352 (359)
Q Consensus 276 ~v~l~v~~~-~~~~~~~--~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~ 352 (359)
.++|++.+. ......+ .....+||.+.. + +|..+.++|||+++||++||+|++|||+++.++++..+.-.
T Consensus 78 ~v~l~vr~~~~~~~v~l~~~~~~~lG~~~~~------g-~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~~~~v~~~ 150 (166)
T 1w9e_A 78 KITMTIRDRPFERTITMHKDSTGHVGFIFKN------G-KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADI 150 (166)
T ss_dssp EEEEEEECCTTCEEEEEECCTTSCCSEEEET------T-EEEEECTTSHHHHTTCCSSEEEEEETTEECTTCCHHHHHHH
T ss_pred EEEEEEEcCCCcEEEEEecCCCCcEeEEEeC------C-EEEEEccCCHHHHcCCCCCCEEEEECCEECCCCChHHHHHH
Confidence 899999655 3333322 234678988872 3 89999999999999999999999999999999999888766
Q ss_pred HHh
Q psy5022 353 LAT 355 (359)
Q Consensus 353 l~~ 355 (359)
++.
T Consensus 151 v~r 153 (166)
T 1w9e_A 151 LST 153 (166)
T ss_dssp HHH
T ss_pred Hhh
Confidence 654
No 21
>1wvh_A Tensin, tensin1; beta sandwich, cell adhesion; 1.50A {Gallus gallus} SCOP: b.55.1.2 PDB: 2gjy_A
Probab=99.73 E-value=3.3e-17 Score=132.15 Aligned_cols=117 Identities=19% Similarity=0.237 Sum_probs=84.8
Q ss_pred CcEEEEeeeEEEEeccCCChhhHH-HHHHHHHHHhCCCCCCCCCcEEEEEEECCeeEEEeCCccc-eeeccccceeeeEE
Q psy5022 28 GTLFRLKFLGSVQVDEDDPKCCKR-RVKKVMVEEAAPEGETQPSTEVDLFISTEKIMVLNTDLKE-IMMDHALRTISYIA 105 (359)
Q Consensus 28 gv~f~~kylGs~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~l~iS~~gi~~~~~~t~~-~~~~~~l~~IS~~~ 105 (359)
|-.+.++||||++|....|.+.++ ++++++.+ ....+.++|.|.||.+||+++|..++. ...++||++||||+
T Consensus 1 gaacnV~yLgSvevesltG~~av~~Ai~~~l~~-----~~~~~~t~vh~kVS~qGItLtD~~rk~ffRrhypl~~VsfCa 75 (134)
T 1wvh_A 1 GAACNVLFINSVEMESLTGPQAISKAVAETLVA-----DPTPTATIVHFKVSAQGITLTDNQRKLFFRRHYPLNTVTFCD 75 (134)
T ss_dssp -CEEEEEEEEEEEEETCCHHHHHHHHHHHHHTC-----SSCCCCEEEEEEEETTEEEEEESSSCSSCEEEEEGGGEEEEE
T ss_pred CCceEEEEEEEEEecCCcCHHHHHHHHHHHHhc-----CCCCCCeEEEEEEEcCCCeEEccCcceEEEEecccCcEEEec
Confidence 446889999999999988888765 44444432 223457899999999999999999988 46788999999999
Q ss_pred ecCCceEEe------eecccccccCCCCCCCCCCCcceeeEee---ccc-hhhHHhhc
Q psy5022 106 DIGDLVVLM------ARRRFVSQEADEPPKISRTPKMICHVFE---SDE-AQFIAQSI 153 (359)
Q Consensus 106 ~~~~~~~~~------~~~~f~~~~~~~~~~~~~~~~~~Chvf~---s~~-a~~i~~~i 153 (359)
.|++-=-|. ++|.|+|+++.. .......||||. ++. |..|...+
T Consensus 76 ~dP~~r~w~~~~~~~~~riFGFVar~~----~~~~~n~CHvF~e~d~~qpa~~Iv~~v 129 (134)
T 1wvh_A 76 LDPQERKWTKTDGSGPAKLFGFVARKQ----GSTTDNVCHLFAELDPDQPAAAIVNFV 129 (134)
T ss_dssp ECTTCCEEECSSSSCEEEEEEEEECC-----CCTTCEEEEEEEECCTTSCHHHHHHHH
T ss_pred CCcccccccccccCCCceEEEEEEccC----CCCCCeeEEEecccCCCCCHHHHHHHH
Confidence 777511110 158999997532 223569999995 443 77776544
No 22
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.73 E-value=4.3e-17 Score=169.29 Aligned_cols=152 Identities=24% Similarity=0.363 Sum_probs=120.8
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCC----cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK- 272 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~----~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~- 272 (359)
..+++.|.|.. ++|||+|.++ .+. ...+++|..|.++|||+++|+|+.||+|++|||+++.+ ++..++
T Consensus 59 ~~~~v~l~k~~-~glGf~i~gg-~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 136 (721)
T 2xkx_A 59 EYEEITLERGN-SGLGFSIAGG-TDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKE 136 (721)
T ss_pred eEEEEEEEeCC-CCCCEEEeCC-cCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhc
Confidence 45679999987 4999999964 222 24578999999999999999999999999999999876 333333
Q ss_pred CCCeEEEEEEeCcce-----EE-eeccccccCcEEecccc-----cccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEE
Q psy5022 273 ANGIEDHSFVKEMDY-----QE-VLNSQEIFGDELQMFAK-----KELQKEICSLLRGGIAERGG-VRVGHRIIEINNQS 340 (359)
Q Consensus 273 ~~~~v~l~v~~~~~~-----~~-~~~~~~~~G~~~~~~~~-----~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~ 340 (359)
.+..++|+|.|.... .. +.+...+|||.+.++.. ...+.+|..|.+||+|+++| |++||+|++|||++
T Consensus 137 ~g~~v~l~v~R~~~~~~~~~~v~l~k~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~ 216 (721)
T 2xkx_A 137 AGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVG 216 (721)
T ss_pred cccccceEEEecccccccceeeeeeeecCCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCee
Confidence 356788999876421 11 23445679999876432 13467999999999999999 99999999999999
Q ss_pred CCCCCHHHHHHHHHhc
Q psy5022 341 VVAVPHEKIVNLLATS 356 (359)
Q Consensus 341 v~~~~~~~~v~~l~~s 356 (359)
+.+++|.+++.+|+++
T Consensus 217 v~~~~~~~~~~~l~~~ 232 (721)
T 2xkx_A 217 LEDVMHEDAVAALKNT 232 (721)
T ss_pred CCCCCHHHHHHHHHcC
Confidence 9999999999999854
No 23
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=99.70 E-value=2.3e-16 Score=128.63 Aligned_cols=121 Identities=17% Similarity=0.278 Sum_probs=86.0
Q ss_pred cEEEEeeeEEEEeccC-----CChhhHHHH-HHHHHHHh-CCC---CCCCCCcEEEEEEECCeeEEEeCCccceeecccc
Q psy5022 29 TLFRLKFLGSVQVDED-----DPKCCKRRV-KKVMVEEA-APE---GETQPSTEVDLFISTEKIMVLNTDLKEIMMDHAL 98 (359)
Q Consensus 29 v~f~~kylGs~~V~~~-----~~~~~~~~~-~~~~~~~~-~~~---~~~~~~~~v~l~iS~~gi~~~~~~t~~~~~~~~l 98 (359)
..|.|+|||++||.+. ++...+..+ +++...+. ... +.--++++..|.++.++|+++|++|+..|++++|
T Consensus 3 ~~F~Vr~LG~vEv~e~~~~p~r~s~~v~~~ir~L~~~~~~~~d~~~~~wg~gq~~~L~v~~~tlrLvD~~tk~~L~~~pI 82 (148)
T 3d8d_A 3 KCFAVRSLGWVEMTEEELAPGRSSVAVNNCIRQLSYHKNNLHDPMSGGWGEGKDLLLQLEDETLKLVEPQSQALLHAQPI 82 (148)
T ss_dssp EEEEEEEEEEEECCGGGGSTTTHHHHHHHHHHHHTTCCCCCCCTTSTTCSTTCEEEEEEETTEEEEECTTTCCEEEEEEG
T ss_pred eeEEeeecccEEEecccCCccccHHHHHHHHHHHHhcccccccccccccccCceEEEEEcCCeEEEecCCCCceEEEeeE
Confidence 5799999999999655 333333322 33321110 000 0001146899999999999999999999999999
Q ss_pred ceeeeEEecCCceEEeeec--ccccccCCCCCCCCCCCcceeeEeeccc-hhhHHhhcchhhHH
Q psy5022 99 RTISYIADIGDLVVLMARR--RFVSQEADEPPKISRTPKMICHVFESDE-AQFIAQSIGQAFQV 159 (359)
Q Consensus 99 ~~IS~~~~~~~~~~~~~~~--~f~~~~~~~~~~~~~~~~~~Chvf~s~~-a~~i~~~ig~af~~ 159 (359)
++|+||+...+ +.+ .|+|+. ++.++.++.||||.|+. |..|+.++-.+...
T Consensus 83 ~~I~f~~~gr~-----~~~~~dFAfv~-----rd~~t~~~~CHvFrCe~~a~~Ia~al~~~c~~ 136 (148)
T 3d8d_A 83 ISIRVWGVGRD-----SGRERDFAYVA-----RDKLTQMLKCHVFRCEAPAKNIATSLHEICSK 136 (148)
T ss_dssp GGCCEEEECCC-----C--CCEEEEEE-----ECTTTCCEEEEEEEESSCHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCC-----CCccccEEEEE-----ecCCCcceEeEEEEcCCchHHHHHHHHHHHHH
Confidence 99999996655 323 599984 45778899999999987 88888877666443
No 24
>3hqc_A Tensin-like C1 domain-containing phosphatase; TENC1, phosphotyrosine binding domain, PTB, TNS2, KIAA1075, struct genomics, PSI-2; 1.80A {Homo sapiens} SCOP: b.55.1.2 PDB: 2loz_A 2dkq_A
Probab=99.65 E-value=2.1e-16 Score=130.37 Aligned_cols=123 Identities=15% Similarity=0.164 Sum_probs=87.3
Q ss_pred CcCCCCcEEEEeeeEEEEeccCCChhhHHHH-HHHHHHHhCCCCCCCCCcEEEEEEECCeeEEEeCCccceee-ccccce
Q psy5022 23 TGLGPGTLFRLKFLGSVQVDEDDPKCCKRRV-KKVMVEEAAPEGETQPSTEVDLFISTEKIMVLNTDLKEIMM-DHALRT 100 (359)
Q Consensus 23 ~~l~~gv~f~~kylGs~~V~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~l~iS~~gi~~~~~~t~~~~~-~~~l~~ 100 (359)
+.|..|..|.++||||++|....|...++.+ .+++.+. +..+.+.|.|.||.+||+++|...+..+. ++|+++
T Consensus 8 ~lL~qgaacnv~yLgSvevesltG~~av~kAv~~~l~~~-----~~~~~t~V~fkVS~qGItLtD~~rK~FfrrHypl~~ 82 (157)
T 3hqc_A 8 DLLRQGAACSVLYLTSVETESLTGPQAVARASSAALSCS-----PRPTPAVVHFKVSAQGITLTDNQRKLFFRRHYPVNS 82 (157)
T ss_dssp HHHHHCEEEEEEEEEEEECTTCCHHHHHHHHHHHHHHCC--------CCEEEEEEEETTEEEEEEEETTEEEEEEEEGGG
T ss_pred HHHhcCCeeeEEEeceEecCCCCChHHHHHHHHHHHhcC-----CCCCCeEEEEEEeCCCceEEecccceeehhcCcccc
Confidence 4577899999999999999999988876544 4443321 12346799999999999999988877654 479999
Q ss_pred eeeEEecCCceEEe-----eecccccccCCCCCCCCCCCcceeeEeec---cc-hhhHHhhcc
Q psy5022 101 ISYIADIGDLVVLM-----ARRRFVSQEADEPPKISRTPKMICHVFES---DE-AQFIAQSIG 154 (359)
Q Consensus 101 IS~~~~~~~~~~~~-----~~~~f~~~~~~~~~~~~~~~~~~Chvf~s---~~-a~~i~~~ig 154 (359)
||||+.|+.-=-|. +.|.|+||++.. .......||||.. +. |..|..-+.
T Consensus 83 IsFC~~DP~~r~w~~~~~~~~riFGFVARk~----~s~~~n~CHlFae~dp~QPAsaIvnfv~ 141 (157)
T 3hqc_A 83 ITFSSTDPQDRRWTNPDGTTSKIFGFVAKKP----GSPWENVCHLFAELDPDQPAGAIVTFIT 141 (157)
T ss_dssp EEEEEECTTCCEEECTTSCEEEEEEEEEEET----TEEEEEEEEEEECCBTTBCHHHHHHHHH
T ss_pred eEeecCChhhccccccCCCcccEEEEEEccC----CCCCCeeEEEeeccCCCCCHHHHHHHHH
Confidence 99999776511110 237899997432 2233689999963 33 777775443
No 25
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.63 E-value=4.9e-15 Score=153.87 Aligned_cols=152 Identities=24% Similarity=0.255 Sum_probs=114.1
Q ss_pred cEEEEeeCCCCCccceEEEecCCC--C-cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CC
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWG--S-MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-AN 274 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g--~-~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~ 274 (359)
..++.|.+.. .+|||++.++.-. . ...+++|..|.++|||+++|+|++||+|++|||+++.+ ++..++ .+
T Consensus 155 ~~~v~l~k~~-~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 233 (721)
T 2xkx_A 155 VMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTY 233 (721)
T ss_pred ceeeeeeeec-CCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCC
Confidence 3567787764 4799999753110 0 12478999999999999999999999999999999876 333333 35
Q ss_pred CeEEEEEEeCcceE----------------------------------------------------------------Ee
Q psy5022 275 GIEDHSFVKEMDYQ----------------------------------------------------------------EV 290 (359)
Q Consensus 275 ~~v~l~v~~~~~~~----------------------------------------------------------------~~ 290 (359)
..+.|.|.|+.... .+
T Consensus 234 ~~v~l~V~R~g~~~~~~~~~~p~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~l 313 (721)
T 2xkx_A 234 DVVYLKVAKPSNAYLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVI 313 (721)
T ss_pred CeEEEEEEeCCcccccCCCCCCCcccCCCCCcccccCCcccccccccccCCCCCCcccCCcccccccccccccceEEEEE
Confidence 57888887643210 00
Q ss_pred eccccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 291 LNSQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
.+...+|||.+.++.. ..+.+|.+|.+||+|+++| |++||+|++|||+++.++++++++++|+++.
T Consensus 314 ~~~~~~lG~~i~~~~~-~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~ 380 (721)
T 2xkx_A 314 HRGSTGLGFNIVGGED-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAG 380 (721)
T ss_pred EECCCCccEEEeccCC-CCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcC
Confidence 1123468888865422 2477999999999999998 9999999999999999999999999998753
No 26
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.62 E-value=2.7e-15 Score=132.79 Aligned_cols=124 Identities=15% Similarity=0.162 Sum_probs=94.9
Q ss_pred CcEEEEEECCCChhhhcCCCCCC-CEEEEECCccHHH------HHHhhcCCCeEEEEEEeCcc---eEEeec------cc
Q psy5022 231 PTVVIANLAPAGAAARCGQLNIG-DQIIAVNGVSLVA------YMEFLKANGIEDHSFVKEMD---YQEVLN------SQ 294 (359)
Q Consensus 231 ~~~~V~~v~~~s~A~~~G~L~~G-D~Il~Vng~~v~~------~~~~~~~~~~v~l~v~~~~~---~~~~~~------~~ 294 (359)
.+++|..|.++|||+++| |++| |+|++|||+++.+ .+.....+..+++++.|... ....+. ..
T Consensus 16 ~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~v~l~p~~~~~~~ 94 (209)
T 3rle_A 16 EGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPSNLWGGQ 94 (209)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCCEEEEEECCCSSSSSS
T ss_pred CEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCceEEEEEEccccccccc
Confidence 468999999999999999 9999 9999999998876 22233456789999987532 122221 23
Q ss_pred cccCcEEecccc---cccCcEEEEEcCCChhhcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 295 EIFGDELQMFAK---KELQKEICSLLRGGIAERGGVRV-GHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 295 ~~~G~~~~~~~~---~~~~~~I~~v~~gs~A~~~gL~~-GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
..+|+.+..... ...+.+|.+|.++|||+++||++ ||+|++|||+ +.++ +++.++|++++|
T Consensus 95 ~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~--~~l~~~l~~~~g 159 (209)
T 3rle_A 95 GLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNES--EDLFSLIETHEA 159 (209)
T ss_dssp SSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSS--SCHHHHHHHTTT
T ss_pred CccceEEeecChhHccccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCH--HHHHHHHHhCCC
Confidence 468888764321 22456899999999999999999 9999999998 7654 788888887655
No 27
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.55 E-value=3.3e-14 Score=139.41 Aligned_cols=124 Identities=18% Similarity=0.248 Sum_probs=94.7
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH------HHHhhcCCCeEEEEEEeCcceEE---eec--c------
Q psy5022 231 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA------YMEFLKANGIEDHSFVKEMDYQE---VLN--S------ 293 (359)
Q Consensus 231 ~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~------~~~~~~~~~~v~l~v~~~~~~~~---~~~--~------ 293 (359)
.+++|..|.++|||+++| |+.||+|++|||+++.+ .+.....++.++|++.|+..... .+. .
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~~~~~~ 341 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSASA 341 (436)
T ss_pred cceEEEEECCCChHHHCC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEECCCCcccccc
Confidence 478999999999999999 99999999999999876 34444567789999998754322 111 0
Q ss_pred -ccccCcEEecccc-----cccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 294 -QEIFGDELQMFAK-----KELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 294 -~~~~G~~~~~~~~-----~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
...+|+....... ...+.+|.+|.++|||+++||++||+|++|||+++.+ ++++.++|++..
T Consensus 342 ~~~~~gl~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~--~~~~~~~l~~~~ 409 (436)
T 4a8c_A 342 EMITPALEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNS--IAEMRKVLAAKP 409 (436)
T ss_pred cccccCceeeecccccccCCCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCC--HHHHHHHHHhCC
Confidence 1124444333211 1236789999999999999999999999999999975 599999998744
No 28
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.53 E-value=5.6e-14 Score=138.15 Aligned_cols=137 Identities=16% Similarity=0.313 Sum_probs=101.5
Q ss_pred ccceEEEec------CCCCcC--CcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH------HHHhhcCCCeEEEEE
Q psy5022 216 ILGVVIVES------GWGSML--PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA------YMEFLKANGIEDHSF 281 (359)
Q Consensus 216 ~lG~~i~~~------~~g~~~--~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~------~~~~~~~~~~v~l~v 281 (359)
.||+.+... .+|... .+++|..|.++|||+++| |+.||+|++|||+++.+ .+.....++.++|+|
T Consensus 259 ~lGv~~~~~~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~V 337 (451)
T 3pv2_A 259 LMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAG-LKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIV 337 (451)
T ss_dssp BCCEEEEECCHHHHHHTTSCTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEE
T ss_pred cccceEEeccHHHHHhcCCCcCCceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE
Confidence 567766532 133332 478999999999999999 99999999999999876 444456678999999
Q ss_pred EeCcceEEe---ec--c----------ccccCcEEeccccc------ccCcEEEEEcCCChhhcCCCCCCCEEEEECCEE
Q psy5022 282 VKEMDYQEV---LN--S----------QEIFGDELQMFAKK------ELQKEICSLLRGGIAERGGVRVGHRIIEINNQS 340 (359)
Q Consensus 282 ~~~~~~~~~---~~--~----------~~~~G~~~~~~~~~------~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~ 340 (359)
.|+.....+ .. . ...+|+.+...... ..+.+|.+|.++|||+++||++||+|++|||++
T Consensus 338 ~R~g~~~~~~v~l~~~~~~~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~ 417 (451)
T 3pv2_A 338 ERDNKPLTLSAVVTDIKSHEQKLQSNNPFLYGLALRAFEQESPPHGNVIGVQVVGASENSAGWRAGIRPGDIIISANKKP 417 (451)
T ss_dssp EETTEEEEEEEECBCHHHHHHHHHHHSTTTTTEEEEEEEEECTTSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEE
T ss_pred EECCEEEEEEEEEccCCccccccccccccccccccccCChhHhcccCCCceEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 987543321 11 0 12345555432111 124589999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHh
Q psy5022 341 VVAVPHEKIVNLLAT 355 (359)
Q Consensus 341 v~~~~~~~~v~~l~~ 355 (359)
+.+ .+++.++|++
T Consensus 418 v~~--~~~~~~~l~~ 430 (451)
T 3pv2_A 418 VTD--VKSLQTIAQE 430 (451)
T ss_dssp CCS--HHHHHHHTTS
T ss_pred CCC--HHHHHHHHhc
Confidence 976 5899998876
No 29
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.33 E-value=1.9e-13 Score=134.30 Aligned_cols=123 Identities=21% Similarity=0.302 Sum_probs=46.2
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH---HHHh---hcCCCeEEEEEEeCcceEEe---ec--c------
Q psy5022 231 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA---YMEF---LKANGIEDHSFVKEMDYQEV---LN--S------ 293 (359)
Q Consensus 231 ~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~---~~~~---~~~~~~v~l~v~~~~~~~~~---~~--~------ 293 (359)
.+++|..|.++|||+++| |++||+|++|||+++.+ +... .+.++.++|++.|+.....+ .. .
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~~~~~~ 364 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDS 364 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCSSHHHHHHTTSSBTTCCCEEEEESSSCEEECCCC-----------
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEecCCCccccc
Confidence 378899999999999999 99999999999999876 3333 34567899999886533221 00 0
Q ss_pred ----ccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 294 ----QEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 294 ----~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
...+|+.+... ....+.+|..|.++|||+++||++||+|++|||+++.+ ++++.++|++..
T Consensus 365 ~~~~~~~~G~~l~~~-~~~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~--~~~l~~~l~~~~ 429 (448)
T 1ky9_A 365 SSIFNGIEGAEMSNK-GKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKN--IAELRKVLDSKP 429 (448)
T ss_dssp --------------------------------------------------------------------
T ss_pred ccccccccceEeecc-CCCCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCC--HHHHHHHHHcCC
Confidence 11246655422 12236789999999999999999999999999999985 588888887643
No 30
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.32 E-value=2.9e-12 Score=95.64 Aligned_cols=56 Identities=30% Similarity=0.455 Sum_probs=51.0
Q ss_pred ccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 294 QEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
.++|||.+.+ ..|.++.++|||+++||++||+|++|||+++.+++|++++++||++
T Consensus 15 ~g~~Gf~i~~-------g~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr~~ 70 (82)
T 1r6j_A 15 TGHVGFIFKN-------GKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTS 70 (82)
T ss_dssp TSCCCEEEET-------TEEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred CCCeEEEEEC-------CEEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Confidence 4569999983 4689999999999999999999999999999999999999999943
No 31
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.29 E-value=1.5e-11 Score=93.77 Aligned_cols=78 Identities=26% Similarity=0.447 Sum_probs=66.1
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH--------HHHhhcC
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--------YMEFLKA 273 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--------~~~~~~~ 273 (359)
..+++|.|.|.. ++||++|.+++.| .++|+.|.++|+|+++|+|++||+|++|||+++.+ +++.++.
T Consensus 4 g~~k~V~l~K~~-~~LG~tI~~~g~g----~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~ 78 (95)
T 3gge_A 4 GIEKEVNVYKSE-DSLGLTITDNGVG----YAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKK 78 (95)
T ss_dssp EEEEEEEEECCS-SCCCEEEECSSSS----CCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCT
T ss_pred CeEEEEEEEECC-CCceEEEEcCCCC----cEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCC
Confidence 356789999985 7999999854333 57999999999999999999999999999999877 6777777
Q ss_pred CCeEEEEEEeC
Q psy5022 274 NGIEDHSFVKE 284 (359)
Q Consensus 274 ~~~v~l~v~~~ 284 (359)
+..++|.+.++
T Consensus 79 g~~~~L~lv~p 89 (95)
T 3gge_A 79 EELFTMKLIEP 89 (95)
T ss_dssp TCEEEEEEEEE
T ss_pred CCEEEEEEECc
Confidence 88888888754
No 32
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.26 E-value=2.2e-11 Score=92.94 Aligned_cols=67 Identities=21% Similarity=0.220 Sum_probs=57.6
Q ss_pred eeccccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 290 VLNSQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 290 ~~~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
+.+...+|||++.+. .....+|.+|.+||+|++.| |++||+|++|||+++.+++|.+++++|++.++
T Consensus 11 l~K~~~~LG~tI~~~--g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~ 78 (95)
T 3gge_A 11 VYKSEDSLGLTITDN--GVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKK 78 (95)
T ss_dssp EECCSSCCCEEEECS--SSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCT
T ss_pred EEECCCCceEEEEcC--CCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCC
Confidence 346668999999853 23357999999999999954 99999999999999999999999999998754
No 33
>4dx8_A Integrin beta-1-binding protein 1; protein-protien complex, PTB domain, nudix fold, protein-Pro interaction, membrane, nucleus, protein binding; 2.54A {Homo sapiens} PDB: 4dx9_A
Probab=99.25 E-value=8.9e-11 Score=94.91 Aligned_cols=120 Identities=20% Similarity=0.242 Sum_probs=83.1
Q ss_pred cEEEEeeeEEEEeccCC--C--hhhHHHHHHHH--HHH--hCCCCCCCCCcEEEEEEECCeeEEEeCCccceeeccccce
Q psy5022 29 TLFRLKFLGSVQVDEDD--P--KCCKRRVKKVM--VEE--AAPEGETQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRT 100 (359)
Q Consensus 29 v~f~~kylGs~~V~~~~--~--~~~~~~~~~~~--~~~--~~~~~~~~~~~~v~l~iS~~gi~~~~~~t~~~~~~~~l~~ 100 (359)
-.|.|||||.++=-... + +.-.+.+ ..+ ++. +.|.... ..+|.|.||-.|||+.+.++..+++.|||+.
T Consensus 15 aE~~VKylG~i~~l~~~~~~~~~~~~ell-~~ID~aQq~gkLP~~~~--~Edvi~svSkyGvkl~~~d~~dvl~RipL~~ 91 (154)
T 4dx8_A 15 AEFRIKYVGAIEKLKLSEGKGLEGPLDLI-NYIDVAQQDGKLPFVPP--EEEFIMGVSKYGIKVSTSDQYDVLHRHALYL 91 (154)
T ss_dssp EEEEEEEEEEEEEESCC---CCCHHHHHH-HHHHHHHHTTSSCSSCC--SCCEEEEEETTEEEEEETTSCCEEEEEEGGG
T ss_pred eEEEEEEEEEEeecccccCccccCcHHHH-HHHHHHHHhCcCCCCCC--cCeEEEEEeccCcEEEeccCcccccchhHHH
Confidence 46999999999982221 1 1223321 122 222 2343332 3379999999999999999999999999999
Q ss_pred ee-eEE-ecCC--ceEEeeecccccccCCCCCCCCCCCcceeeEeeccc---hhhHHhhcchhhHHHH
Q psy5022 101 IS-YIA-DIGD--LVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE---AQFIAQSIGQAFQVAY 161 (359)
Q Consensus 101 IS-~~~-~~~~--~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~---a~~i~~~ig~af~~ay 161 (359)
|+ +.+ ||+- .-.+.+-| +.++++.++.||||+|.+ |++|+..+|++|..+.
T Consensus 92 I~~~v~YdDg~g~g~~vla~K----------T~~~~~~~~~~hv~Qc~s~~~A~~iC~~l~~~f~~~~ 149 (154)
T 4dx8_A 92 IIRMVCYDDGLGAGKSLLALK----------TTDASNEEYSLWVYQCNSLEQAQAICKVLSTAFDSVL 149 (154)
T ss_dssp EEEEEEEECCSSSCCEEEEEE----------EECTTSCCEEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred hhhheeeccccccccEEEEEE----------ecCCCCceEEEEEEEcCCHHHHHHHHHHHHHHHHHHH
Confidence 99 444 5532 11111222 345778899999999876 9999999999999885
No 34
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.25 E-value=5.9e-11 Score=92.34 Aligned_cols=85 Identities=47% Similarity=0.676 Sum_probs=67.2
Q ss_pred cccccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH--------HHHhh
Q psy5022 200 KKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--------YMEFL 271 (359)
Q Consensus 200 ~~~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--------~~~~~ 271 (359)
.++.++++.+.|..+++|||++...+.+...++++|..|.++|||+++|.|++||+|++|||+++.+ +++..
T Consensus 6 ~~~~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~ 85 (101)
T 2yt7_A 6 SGDNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRET 85 (101)
T ss_dssp TTCCCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHT
T ss_pred CCCceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3456788999988878999999865444444578999999999999955599999999999999943 44444
Q ss_pred cCCCeEEEEEEeC
Q psy5022 272 KANGIEDHSFVKE 284 (359)
Q Consensus 272 ~~~~~v~l~v~~~ 284 (359)
+.+..++|++.|.
T Consensus 86 ~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 86 KSQTSVTLSIVHC 98 (101)
T ss_dssp TTSSEEEEEECCC
T ss_pred CCCCeEEEEEEeC
Confidence 4567899988764
No 35
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.24 E-value=2.4e-11 Score=91.33 Aligned_cols=66 Identities=23% Similarity=0.302 Sum_probs=58.1
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
+...+|||.+.++.....+.+|..|.++|||+++| |++||+|++|||+++.+++++++.++|++++
T Consensus 8 k~~~g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 74 (85)
T 2i04_A 8 KSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIP 74 (85)
T ss_dssp CBTTBSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred ECCCCCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 45568999998765555568999999999999999 9999999999999999999999999998764
No 36
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.22 E-value=3.7e-11 Score=90.72 Aligned_cols=66 Identities=17% Similarity=0.168 Sum_probs=58.3
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
+...+|||.+.++.....+.+|.+|.++|||+++||++||+|++|||+++.+++++++.++|+.+.
T Consensus 9 ~~~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 74 (87)
T 2pa1_A 9 AGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSP 74 (87)
T ss_dssp CSSSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCC
T ss_pred CCCCccCEEEecccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 456789999987655455789999999999999999999999999999999999999999998753
No 37
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.21 E-value=4.9e-11 Score=90.24 Aligned_cols=65 Identities=23% Similarity=0.285 Sum_probs=57.3
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.++.....+.+|.+|.++|||+++||++||+|++|||+++.++++.++..+++..
T Consensus 10 ~~~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 74 (88)
T 2uzc_A 10 VGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGC 74 (88)
T ss_dssp ESSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred cCCCcccEEEECcCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45567999998765555567999999999999999999999999999999999999999999865
No 38
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.21 E-value=4.3e-11 Score=89.88 Aligned_cols=65 Identities=15% Similarity=0.194 Sum_probs=57.2
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.++.....+.+|.+|.++|||+++||++||+|++|||+++.++++.+++.+++..
T Consensus 8 ~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 72 (85)
T 1rgw_A 8 TGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSA 72 (85)
T ss_dssp CCSSCCCEEECCCGGGTSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTTC
T ss_pred eCCCccCEEEEeccCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHcC
Confidence 34568999998765555578999999999999999999999999999999999999999988764
No 39
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.21 E-value=3.8e-11 Score=91.10 Aligned_cols=64 Identities=23% Similarity=0.316 Sum_probs=56.6
Q ss_pred cccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 293 SQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
...+|||.+.++.....+.+|..|.++|||+++||++||+|++|||+++.++++.+++.+++.+
T Consensus 11 ~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 74 (89)
T 2q3g_A 11 GPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRAC 74 (89)
T ss_dssp SSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTC
T ss_pred CCCcccEEEECcCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4578999998765555567899999999999999999999999999999999999999998864
No 40
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.20 E-value=1.2e-10 Score=93.19 Aligned_cols=93 Identities=20% Similarity=0.327 Sum_probs=69.0
Q ss_pred chhhhhhcccccEEEEeeCCCCCccceEEEecCCC-CcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----
Q psy5022 193 DELQMFAKKELQKEVVVPKAKGEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA----- 266 (359)
Q Consensus 193 ~~~~~~~~~~~~~~v~l~r~~~~~lG~~i~~~~~g-~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~----- 266 (359)
+....+..+...+.|.+.|..+++|||++.++... ....+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 14 ~~~~~~~~~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~ 93 (118)
T 3b76_A 14 GTENLYFQSMHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSE 93 (118)
T ss_dssp ----CCCEEEEEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHH
T ss_pred CccccccCCCCcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH
Confidence 33445566666788999988778999999864211 123478999999999999999999999999999999985
Q ss_pred HHHhhc-CCCeEEEEEEeCc
Q psy5022 267 YMEFLK-ANGIEDHSFVKEM 285 (359)
Q Consensus 267 ~~~~~~-~~~~v~l~v~~~~ 285 (359)
++..++ .++.++|+|.|..
T Consensus 94 ~~~~l~~~~~~v~L~v~R~~ 113 (118)
T 3b76_A 94 AVALLKRTSSSIVLKALEVK 113 (118)
T ss_dssp HHHHHHSCCSEEEEEEEEEE
T ss_pred HHHHHHcCCCeEEEEEEECC
Confidence 333333 3567889888753
No 41
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.20 E-value=4.8e-11 Score=90.87 Aligned_cols=67 Identities=22% Similarity=0.350 Sum_probs=57.9
Q ss_pred eccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 291 LNSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
.+...+|||.+.+... ..+.+|.+|.++|||+++||++||+|++|||+++.++++.+++.+++++.+
T Consensus 10 ~r~~~g~G~~~~~~~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 76 (91)
T 1g9o_A 10 EKGPNGYGFHLHGEKG-KLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALN 76 (91)
T ss_dssp ECBTTBCCEEEEECTT-CSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSS
T ss_pred EeCCCcccEEEEecCC-CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 3556689999986432 247899999999999999999999999999999999999999999997654
No 42
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.20 E-value=4.2e-11 Score=91.01 Aligned_cols=66 Identities=20% Similarity=0.315 Sum_probs=57.9
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
+...+|||.+.++.....+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+++.
T Consensus 10 ~~~~g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 76 (90)
T 2q9v_A 10 RKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAA 76 (90)
T ss_dssp CBTTBCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHH
T ss_pred ECCCccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 45568999998765554568999999999999999 9999999999999999999999999998753
No 43
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=99.19 E-value=1.3e-10 Score=115.63 Aligned_cols=125 Identities=13% Similarity=0.198 Sum_probs=95.9
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH----------------HHHhhcCCCeEEEEEEeCcceEE---ee
Q psy5022 231 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA----------------YMEFLKANGIEDHSFVKEMDYQE---VL 291 (359)
Q Consensus 231 ~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~----------------~~~~~~~~~~v~l~v~~~~~~~~---~~ 291 (359)
.+++|..|.|+|||++ + |+.||.|++|||+++.+ ++...+.|++++|+|.|+.+... .+
T Consensus 277 ~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~~v~Vtl 354 (539)
T 4fln_A 277 EGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVL 354 (539)
T ss_dssp BCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEEEEEEEC
T ss_pred CceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEE
Confidence 4789999999999986 5 99999999999998842 56667788999999998754322 11
Q ss_pred c------------c----ccccCcEEecccc---------------------------cccCcEEEEEcCCChhhcCCCC
Q psy5022 292 N------------S----QEIFGDELQMFAK---------------------------KELQKEICSLLRGGIAERGGVR 328 (359)
Q Consensus 292 ~------------~----~~~~G~~~~~~~~---------------------------~~~~~~I~~v~~gs~A~~~gL~ 328 (359)
. . ....|+.+...+. ...+.+|..|.++++|...|++
T Consensus 355 ~~~~~~~~~~~~~~~p~~~~~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g~~ 434 (539)
T 4fln_A 355 RPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYEDM 434 (539)
T ss_dssp BCCCCSSCSCTTSSCCCCCCSTTEEEEECCHHHHTTSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCSSC
T ss_pred ccCccccccccccCCCccccccceEEeeCCHHHHHhhcccccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcCCC
Confidence 0 0 0123555443211 1124578999999999999999
Q ss_pred CCCEEEEECCEECCCCCHHHHHHHHHhccCC
Q psy5022 329 VGHRIIEINNQSVVAVPHEKIVNLLATSVGE 359 (359)
Q Consensus 329 ~GD~Il~INg~~v~~~~~~~~v~~l~~s~g~ 359 (359)
+||+|++|||++|.+ ..++.++|++++++
T Consensus 435 ~gdiI~~vNg~~V~s--~~~l~~~l~~~k~~ 463 (539)
T 4fln_A 435 NNQQVLKFNGIPIRN--IHHLAHLIDMCKDK 463 (539)
T ss_dssp CSEEEEEETTEECCS--HHHHHHHHHTCCSS
T ss_pred CCCEEEeECCEEcCC--HHHHHHHHHHcCCC
Confidence 999999999999987 48999999988764
No 44
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.19 E-value=6.7e-11 Score=90.08 Aligned_cols=64 Identities=17% Similarity=0.154 Sum_probs=56.6
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
+...+|||.+.++.....+.+|..|.++|||+++||++||+|++|||+++.++++.++..+++.
T Consensus 10 ~~~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~ 73 (91)
T 2pkt_A 10 QGPGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKG 73 (91)
T ss_dssp ESSSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CCCCCCCEEEEccCCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4457899999876554457799999999999999999999999999999999999999999987
No 45
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=2.8e-11 Score=94.64 Aligned_cols=66 Identities=26% Similarity=0.414 Sum_probs=57.9
Q ss_pred eccccccCcEEecccccccCc-EEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 291 LNSQEIFGDELQMFAKKELQK-EICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~~~~~-~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
.+...+|||.+.++.....+. +|..|.++|||+++| |++||+|++|||+++.+++|++++++|+++
T Consensus 13 ~k~~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 80 (103)
T 1ufx_A 13 KKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEA 80 (103)
T ss_dssp ECCSSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHH
T ss_pred EcCCCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 355678999999765544444 999999999999988 999999999999999999999999999985
No 46
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=5.3e-11 Score=92.95 Aligned_cols=66 Identities=17% Similarity=0.271 Sum_probs=58.5
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
+...+|||.+.++.....+.+|..|.++|||+++| |++||+|++|||+++.++++++++++|+.+.
T Consensus 17 ~~~~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~ 83 (103)
T 1uep_A 17 RMESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAA 83 (103)
T ss_dssp SSSSSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHH
T ss_pred eCCCccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 55678999998765555678999999999999999 9999999999999999999999999998763
No 47
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.17 E-value=2.6e-11 Score=98.91 Aligned_cols=68 Identities=13% Similarity=0.183 Sum_probs=59.7
Q ss_pred eccccccCcEEecccc---cccCcEEEEEcCCChhhcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 291 LNSQEIFGDELQMFAK---KELQKEICSLLRGGIAERG-GVRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~---~~~~~~I~~v~~gs~A~~~-gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
.+...+|||.+.++.. ...+.+|..|.++|||+++ ||++||+|++|||+++.+++|++++++|+.+.+
T Consensus 36 ~k~~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 107 (130)
T 1i16_A 36 EKMSAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPD 107 (130)
T ss_dssp ETTSSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCS
T ss_pred EcCCCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 3556789999997654 3457899999999999997 899999999999999999999999999998754
No 48
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.17 E-value=5.6e-11 Score=89.67 Aligned_cols=64 Identities=23% Similarity=0.375 Sum_probs=56.4
Q ss_pred cccccCcEEecccccccCcEEEEEcCCChhhc-CCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 293 SQEIFGDELQMFAKKELQKEICSLLRGGIAER-GGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~-~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
...+|||.+.++.....+.+|.+|.++|||++ +||++||+|++|||+++.++++++++.+++++
T Consensus 12 ~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 76 (87)
T 4e34_A 12 DHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ 76 (87)
T ss_dssp TTBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CCCcccEEEEccCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 34689999987655445679999999999999 89999999999999999999999999999864
No 49
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.17 E-value=1e-10 Score=87.27 Aligned_cols=72 Identities=17% Similarity=0.307 Sum_probs=58.9
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCe
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGI 276 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~ 276 (359)
..|++.|.|+..++|||++.++ .|..+.++|||+++| |++||+|++|||+++.+ ++..++ .+..
T Consensus 4 ~~r~v~l~k~~~g~~Gf~i~~g---------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~ 73 (82)
T 1r6j_A 4 DPRTITMHKDSTGHVGFIFKNG---------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTV 73 (82)
T ss_dssp CCEEEEEECCTTSCCCEEEETT---------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSE
T ss_pred ceEEEEEEECCCCCeEEEEECC---------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCE
Confidence 4578999999877899999742 478899999999999 99999999999999877 333333 5668
Q ss_pred EEEEEEeC
Q psy5022 277 EDHSFVKE 284 (359)
Q Consensus 277 v~l~v~~~ 284 (359)
++|+|.+.
T Consensus 74 V~L~v~p~ 81 (82)
T 1r6j_A 74 VTITIMPA 81 (82)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 99998763
No 50
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.16 E-value=5.6e-11 Score=92.85 Aligned_cols=67 Identities=24% Similarity=0.385 Sum_probs=58.5
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhc-CCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAER-GGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~-~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
+...+|||.+.++.....+.+|..|.++|||++ +||++||+|++|||+++.++++++++.+|+.+.+
T Consensus 18 ~~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~ 85 (103)
T 2dc2_A 18 EDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRG 85 (103)
T ss_dssp CSSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCS
T ss_pred CCCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 345789999987655445679999999999999 6999999999999999999999999999997654
No 51
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.15 E-value=7.9e-11 Score=90.10 Aligned_cols=66 Identities=29% Similarity=0.495 Sum_probs=56.7
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
+...+|||.+... ....+.+|.+|.++|||+++| |++||+|++|||+++.+++|++++++|+++.+
T Consensus 12 k~~~~lG~~i~~~-~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 78 (93)
T 3o46_A 12 KNREPLGATIKKD-EQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQG 78 (93)
T ss_dssp ESSSCCCEEEEEC-TTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCE
T ss_pred eCCCCccEEEEec-CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4456899999864 223467999999999999988 99999999999999999999999999987643
No 52
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.15 E-value=4.6e-11 Score=94.12 Aligned_cols=67 Identities=21% Similarity=0.297 Sum_probs=57.7
Q ss_pred ccccccCcEEecccc----cccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 292 NSQEIFGDELQMFAK----KELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~----~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
+...+|||.+.++.. ...+.+|..|.++|||+++| |++||+|++|||+++.+++|++++++|+.+.+
T Consensus 23 k~~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 94 (108)
T 2d92_A 23 KDCKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPP 94 (108)
T ss_dssp ECSSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSCS
T ss_pred ECCCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 445689999987543 23467899999999999988 99999999999999999999999999998643
No 53
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.14 E-value=1.2e-10 Score=88.48 Aligned_cols=65 Identities=26% Similarity=0.347 Sum_probs=56.4
Q ss_pred eccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 291 LNSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
.+...+|||.+.+... ..+.+|..|.++|||+++||++||+|++|||+++.+++|+++.++|+.+
T Consensus 11 ~k~~~g~G~~~~~~~~-~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 75 (90)
T 2he4_A 11 RKGPQGYGFNLHSDKS-RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 75 (90)
T ss_dssp ECBTTBCCEEEEECSS-SSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTS
T ss_pred EECCCCccEEEEccCC-CCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3455689999986432 3368999999999999999999999999999999999999999999875
No 54
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.13 E-value=1e-10 Score=92.32 Aligned_cols=64 Identities=17% Similarity=0.320 Sum_probs=56.8
Q ss_pred ccccCcEEecccccc--cCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 294 QEIFGDELQMFAKKE--LQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~--~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
..+|||.+.++.... .+.+|.+|.++|||+++| |++||+|++|||+++.+++|++++++|+++.
T Consensus 24 ~~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~ 90 (109)
T 1wi4_A 24 ETGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAK 90 (109)
T ss_dssp SSCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSC
T ss_pred CCccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccc
Confidence 478999999764422 257999999999999988 9999999999999999999999999999876
No 55
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=1.7e-10 Score=93.03 Aligned_cols=66 Identities=23% Similarity=0.291 Sum_probs=58.7
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
+...+|||.+.++.....+.+|..|.++|||+++| |++||+|++|||+++.++++++++++|++.+
T Consensus 27 ~~~~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 93 (123)
T 1ueq_A 27 KSNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVP 93 (123)
T ss_dssp CCTTSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSC
T ss_pred eCCCceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 45568999998765555678999999999999999 9999999999999999999999999999864
No 56
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.13 E-value=1e-10 Score=88.58 Aligned_cols=60 Identities=25% Similarity=0.369 Sum_probs=54.0
Q ss_pred cccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 293 SQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
....|||.+.+ +.+|.+|.++|||+++| |++||+|++|||+++.+++|++++++|+++.+
T Consensus 11 ~~~~~G~~~~~------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~ 71 (88)
T 3e17_A 11 ANEEYGLRLGS------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRG 71 (88)
T ss_dssp TBCCCCEEEEE------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTT
T ss_pred CCCCCCEEEeC------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 34578998864 68999999999999988 99999999999999999999999999998765
No 57
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.13 E-value=1.3e-10 Score=89.30 Aligned_cols=66 Identities=20% Similarity=0.259 Sum_probs=56.1
Q ss_pred eccccccCcEEeccc--ccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 291 LNSQEIFGDELQMFA--KKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~--~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
.+...+|||.+.... ....+.+|..|.++|||+++||++||+|++|||+++.+++++++.++|+.+
T Consensus 10 ~k~~~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 77 (96)
T 2v90_A 10 EKGPQGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQ 77 (96)
T ss_dssp ECBTTBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred EeCCCcccEEEEeccCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 345568999998632 223367999999999999999999999999999999999999999999875
No 58
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.13 E-value=1.1e-10 Score=91.56 Aligned_cols=65 Identities=20% Similarity=0.395 Sum_probs=56.4
Q ss_pred ccccccCcEEecccccc-----cCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKKE-----LQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~-----~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
....+|||++.++.... .+.+|.+|.++|||+++| |++||+|++|||+++.++++++++.+++.+
T Consensus 10 ~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 80 (106)
T 4amh_A 10 RGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNT 80 (106)
T ss_dssp --CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSC
T ss_pred CCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCC
Confidence 45678999999876533 267999999999999999 999999999999999999999999999865
No 59
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=9.6e-11 Score=88.78 Aligned_cols=63 Identities=30% Similarity=0.430 Sum_probs=55.3
Q ss_pred ccccCcEEecccccccCcEEEEEcCCChhhc-CCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 294 QEIFGDELQMFAKKELQKEICSLLRGGIAER-GGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~-~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
..++||.+.... ..+.+|.+|.++|||++ +||++||+|++|||+++.+++|++++++|+.+.+
T Consensus 12 ~~~lG~~i~~~~--~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~ 75 (88)
T 1kwa_A 12 DEPMGITLKMNE--LNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRG 75 (88)
T ss_dssp SSCCCEEEECSC--GGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCE
T ss_pred CCceeEEEEeCC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 478999998531 23679999999999999 8999999999999999999999999999998653
No 60
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.12 E-value=8.4e-11 Score=90.21 Aligned_cols=67 Identities=19% Similarity=0.283 Sum_probs=56.6
Q ss_pred eccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 291 LNSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
.+...+|||.+...... .+.+|..|.++|||+++||++||+|++|||+++.+++|++++.+|+.+.+
T Consensus 12 ~~~~~~~G~~l~~~~~~-~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 78 (95)
T 3r68_A 12 KKGSNGYGFYLRAGPEQ-KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGD 78 (95)
T ss_dssp ECBTTBCSCEEEEC--C-CSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred ecCCCcccEEEEecCCC-CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 35567899999854322 36789999999999999999999999999999999999999999997543
No 61
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.12 E-value=1.5e-10 Score=89.12 Aligned_cols=63 Identities=24% Similarity=0.394 Sum_probs=53.8
Q ss_pred ccccCcEEec-------ccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 294 QEIFGDELQM-------FAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 294 ~~~~G~~~~~-------~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
..+|||.+.+ ......+.+|..|.++|||+++||++||+|++|||+++.+++++++.++|+.+
T Consensus 15 ~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 84 (96)
T 2ego_A 15 NQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKAS 84 (96)
T ss_dssp TCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHT
T ss_pred CCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3689999986 21223356899999999999999999999999999999999999999999876
No 62
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.12 E-value=1.2e-10 Score=91.79 Aligned_cols=64 Identities=16% Similarity=0.320 Sum_probs=56.4
Q ss_pred cccccCcEEeccccc--ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 293 SQEIFGDELQMFAKK--ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~--~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
...+|||++.++... ..+.+|.+|.++|||+++| |++||+|++|||+++.+++|++++++|+.+
T Consensus 15 ~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 81 (108)
T 3cbz_A 15 KYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDI 81 (108)
T ss_dssp HHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHH
T ss_pred CCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 357899999875432 4567999999999999988 999999999999999999999999999976
No 63
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.11 E-value=2e-10 Score=88.49 Aligned_cols=64 Identities=30% Similarity=0.421 Sum_probs=55.8
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
+...+|||.+.+......+.+|..|.++|||+++| |++||+|++|||+++.+++++++..+|+.
T Consensus 13 ~~~~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 77 (97)
T 1n7e_A 13 RYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQM 77 (97)
T ss_dssp CTTSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred eCCCCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 34566999998754444578999999999999999 99999999999999999999999999983
No 64
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.11 E-value=1.5e-10 Score=87.97 Aligned_cols=64 Identities=17% Similarity=0.310 Sum_probs=56.7
Q ss_pred cccccCcEEecccccccCcEEEEEcCCChhhcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 293 SQEIFGDELQMFAKKELQKEICSLLRGGIAERG-GVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~-gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
...+|||.+.++.....+.+|.+|.++|||+++ ||++||+|++|||+++.++++.+++.+++.+
T Consensus 14 ~~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 78 (90)
T 1qav_A 14 DAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT 78 (90)
T ss_dssp TTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred CCCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 457899999876554557899999999999998 9999999999999999999999999999865
No 65
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.11 E-value=1.3e-10 Score=93.90 Aligned_cols=66 Identities=18% Similarity=0.216 Sum_probs=58.4
Q ss_pred cccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 293 SQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
...+|||.+.++.....+.+|..|.++|||+++| |++||+|++|||+++.+++|++++.+|+++.+
T Consensus 29 ~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~ 95 (125)
T 3hpk_A 29 AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKG 95 (125)
T ss_dssp TTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCS
T ss_pred CCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 4568999998776555567999999999999999 99999999999999999999999999998654
No 66
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.11 E-value=1.8e-10 Score=87.96 Aligned_cols=66 Identities=27% Similarity=0.422 Sum_probs=57.5
Q ss_pred eccccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 291 LNSQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
.+...+|||.+.++.....+.+|..|.++|||+++| |++||+|++|||+++.++++++++.+++.+
T Consensus 12 ~k~~~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 78 (93)
T 2dkr_A 12 PKTDEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAA 78 (93)
T ss_dssp ECCTTCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHC
T ss_pred EeCCCCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 345678999998765445678999999999999985 999999999999999999999999999865
No 67
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.11 E-value=1.9e-10 Score=88.15 Aligned_cols=64 Identities=19% Similarity=0.111 Sum_probs=56.4
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
+....|||.+.++.....+.+|..|.++|||+++||++||+|++|||+++.++++.+++.+++.
T Consensus 15 ~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~ 78 (94)
T 2eeg_A 15 RGPSPWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKG 78 (94)
T ss_dssp CCSSCCSCCEECCTTTTSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHT
T ss_pred eCCCccCEEEECccCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3456799999876555557899999999999999999999999999999999999999988876
No 68
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.10 E-value=1.2e-10 Score=94.74 Aligned_cols=66 Identities=23% Similarity=0.302 Sum_probs=58.0
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
+...+|||.+.++.....+.+|.+|.++|||+++| |++||+|++|||+++.+++|++++++|+.+.
T Consensus 26 ~~~~g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~ 92 (129)
T 2kpk_A 26 KSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIP 92 (129)
T ss_dssp ECSSCCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSC
T ss_pred ECCCcccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 34568999998765555568999999999999999 9999999999999999999999999999864
No 69
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.10 E-value=1.3e-10 Score=93.16 Aligned_cols=64 Identities=22% Similarity=0.358 Sum_probs=56.5
Q ss_pred ccccCcEEecccc---cccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 294 QEIFGDELQMFAK---KELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 294 ~~~~G~~~~~~~~---~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
..+|||.+.++.. ...+.+|.+|.++|||+++| |++||+|++|||+++.++++++++.+|+++.
T Consensus 35 ~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 102 (118)
T 3b76_A 35 GESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTS 102 (118)
T ss_dssp TCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCC
T ss_pred CCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4789999987642 23467999999999999998 9999999999999999999999999999753
No 70
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.10 E-value=2.1e-10 Score=88.35 Aligned_cols=64 Identities=22% Similarity=0.397 Sum_probs=55.8
Q ss_pred ccccccCcEEeccccc----ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 292 NSQEIFGDELQMFAKK----ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~----~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
+...+|||.+.++... ..+.+|.+|.++|||+++| |++||+|++|||+++.+++++++.++|+.
T Consensus 11 k~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 79 (97)
T 2jil_A 11 KEGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ 79 (97)
T ss_dssp CBTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred eCCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4567899999875321 3467899999999999999 99999999999999999999999999987
No 71
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.10 E-value=2e-10 Score=88.64 Aligned_cols=67 Identities=21% Similarity=0.230 Sum_probs=57.2
Q ss_pred eccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 291 LNSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
.+...+|||.+.... ...+.+|..|.++|||+++||++||+|++|||+++.+++++++.++|+++.|
T Consensus 16 ~~~~~g~G~~~~~~~-~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 82 (98)
T 2jxo_A 16 KKGPSGYGFNLHSDK-SKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGD 82 (98)
T ss_dssp ECTTTCCCEEEECCC-SSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred EeCCCcccEEEEecC-CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 345578999997643 2236799999999999999999999999999999999999999999998754
No 72
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=1.5e-10 Score=92.52 Aligned_cols=68 Identities=25% Similarity=0.352 Sum_probs=57.8
Q ss_pred eccccccCcEEeccccc---ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 291 LNSQEIFGDELQMFAKK---ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~---~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
.+...+|||.+.++... ..+.+|.+|.++|||+++| |++||+|++|||+++.++++.+++.+++.+.+
T Consensus 32 ~k~~~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 103 (117)
T 2fne_A 32 ERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKG 103 (117)
T ss_dssp CCBTTBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred EeCCCcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 35557899999875432 3467999999999999988 99999999999999999999999999987543
No 73
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.09 E-value=3e-10 Score=89.54 Aligned_cols=63 Identities=17% Similarity=0.110 Sum_probs=54.7
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
+...++||.+.+ ..+.+|..|.++|||+++||++||+|++|||+++.++++++++++|++..+
T Consensus 31 k~~~~~G~~l~~----~~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~ 93 (109)
T 2vsv_A 31 AEEGDLGFTLRG----NAPVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGE 93 (109)
T ss_dssp CGGGCCCEEEES----SSSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred eCCCceeEEEeC----CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 445788998863 236789999999999999999999999999999999999999999987654
No 74
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.09 E-value=6e-10 Score=84.88 Aligned_cols=81 Identities=26% Similarity=0.293 Sum_probs=63.7
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCe
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGI 276 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~ 276 (359)
..++|.|.|..+.+|||.+.++. ...+++|..|.++|||+++|+|++||+|++|||.++.+ +...++ .++.
T Consensus 4 ~~~~v~l~k~~~~~lG~~~~~~~---~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 80 (92)
T 2qg1_A 4 DTLTIGLQKKPGKGLGLSIVGKR---NDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGT 80 (92)
T ss_dssp CEEEEEEECCTTSCCSEEEECCS---SSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSE
T ss_pred eEEEEEEEeCCCCcccEEEEecc---CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 34578999987789999998532 23578999999999999999999999999999999865 222222 4567
Q ss_pred EEEEEEeCcc
Q psy5022 277 EDHSFVKEMD 286 (359)
Q Consensus 277 v~l~v~~~~~ 286 (359)
++|.+.|...
T Consensus 81 v~l~v~R~~~ 90 (92)
T 2qg1_A 81 VTLEVGRIST 90 (92)
T ss_dssp EEEEEECCCC
T ss_pred EEEEEEcccc
Confidence 9999887643
No 75
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.09 E-value=4.1e-10 Score=86.87 Aligned_cols=79 Identities=19% Similarity=0.400 Sum_probs=61.8
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCC
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANG 275 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~ 275 (359)
..++.+.|.|..+++||+++.... ..+++|..|.++|||+++|+|++||+|++|||.++.+ +...++ .++
T Consensus 11 ~~~~~v~l~K~~~~~lG~~l~~~~----~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~ 86 (97)
T 2ejy_A 11 HMVRLIQFEKVTEEPMGICLKLNE----KQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKG 86 (97)
T ss_dssp --CEEEEEEECSSSCCSEEEEECT----TCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCE
T ss_pred CccEEEEEEeCCCCCeeEEEEeCC----CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 346789999988899999997422 2478999999999999999999999999999999873 333322 345
Q ss_pred eEEEEEEeC
Q psy5022 276 IEDHSFVKE 284 (359)
Q Consensus 276 ~v~l~v~~~ 284 (359)
.++|+|.+.
T Consensus 87 ~v~L~V~~~ 95 (97)
T 2ejy_A 87 MISLKVIPN 95 (97)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEEC
Confidence 788887754
No 76
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=4.7e-10 Score=84.94 Aligned_cols=76 Identities=24% Similarity=0.415 Sum_probs=59.0
Q ss_pred cEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhh-cCCCCCCCEEEEECCccHHH-----HHHhhc-CCCe
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAAR-CGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGI 276 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~-~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~ 276 (359)
.|.|.|.|..+++||+++.... ..+++|..|.++|||++ +| |++||+|++|||+++.+ +...++ ..+.
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~~~----~~~~~I~~V~~gspA~~~ag-L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~ 76 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKMNE----LNHCIVARIMHGGMIHRQGT-LHVGDEIREINGISVANQTVEQLQKMLREMRGS 76 (88)
T ss_dssp CEEEEEEECSSSCCCEEEECSC----GGGEEEEEECTTSHHHHHTC-CCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEE
T ss_pred eEEEEEEeCCCCceeEEEEeCC----CCCEEEEEECCCCHHHHcCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCc
Confidence 4678999998789999998532 23689999999999999 67 99999999999999974 333322 1227
Q ss_pred EEEEEEeC
Q psy5022 277 EDHSFVKE 284 (359)
Q Consensus 277 v~l~v~~~ 284 (359)
++|.+.|.
T Consensus 77 v~l~v~r~ 84 (88)
T 1kwa_A 77 ITFKIVPS 84 (88)
T ss_dssp EEEEEECC
T ss_pred EEEEEECC
Confidence 88887764
No 77
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.09 E-value=3.4e-10 Score=89.70 Aligned_cols=64 Identities=27% Similarity=0.442 Sum_probs=56.7
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
+...+|||.+.++.....+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+++.
T Consensus 32 ~~~~glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 96 (112)
T 2r4h_A 32 RGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKN 96 (112)
T ss_dssp CBTTBTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred cCCCccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 45567999998765445578999999999999999 99999999999999999999999999886
No 78
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.09 E-value=2.5e-10 Score=88.11 Aligned_cols=63 Identities=21% Similarity=0.314 Sum_probs=55.3
Q ss_pred cccccCcEEecccccc------cCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 293 SQEIFGDELQMFAKKE------LQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~------~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
...+|||.+.++.... .+.+|.+|.++|||+++| |++||+|++|||+++.++++.++..+++.
T Consensus 15 ~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 84 (98)
T 1ihj_A 15 GKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE 84 (98)
T ss_dssp TSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 5678999998765332 267899999999999999 99999999999999999999999999986
No 79
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.09 E-value=1.1e-10 Score=88.86 Aligned_cols=65 Identities=26% Similarity=0.346 Sum_probs=54.6
Q ss_pred eccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 291 LNSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
.+...+|||.+..... ..+.+|..|.++|||+++||++||+|++|||+++.+++++++.++|+.+
T Consensus 10 ~k~~~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 74 (91)
T 2vsp_A 10 AKGENGYGFHLNAIRG-LPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSS 74 (91)
T ss_dssp ECBTTBTSCCCBCCTT-CSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTS
T ss_pred EeCCCcccEEEEeccC-CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3455689999875322 2367899999999999999999999999999999999999999999875
No 80
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.08 E-value=1.3e-10 Score=93.44 Aligned_cols=64 Identities=27% Similarity=0.375 Sum_probs=55.3
Q ss_pred cccCcEEecccc---cccCcEEEEEcCCChhhcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 295 EIFGDELQMFAK---KELQKEICSLLRGGIAERG-GVRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 295 ~~~G~~~~~~~~---~~~~~~I~~v~~gs~A~~~-gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
.+|||.+.++.. ...+.+|..|.++|||+++ ||++||+|++|||+++.++++.+++.+|+.+.+
T Consensus 36 ~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~ 103 (120)
T 2iwo_A 36 DSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNASG 103 (120)
T ss_dssp -CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCCS
T ss_pred CCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 589999987643 2346789999999999996 999999999999999999999999999997643
No 81
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.08 E-value=4.3e-10 Score=86.42 Aligned_cols=64 Identities=19% Similarity=0.295 Sum_probs=55.7
Q ss_pred ccccccCcEEeccccc---ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 292 NSQEIFGDELQMFAKK---ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~---~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
+...+|||.+.++... ..+.+|.+|.++|||+++| |++||+|++|||+++.++++.+++.+++.
T Consensus 13 k~~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 80 (96)
T 1d5g_A 13 KNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN 80 (96)
T ss_dssp CSSSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS
T ss_pred eCCCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4457899999875432 3478999999999999999 99999999999999999999999999986
No 82
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.08 E-value=2.8e-10 Score=89.30 Aligned_cols=63 Identities=16% Similarity=0.257 Sum_probs=56.6
Q ss_pred cccCcEEecccccccCcEEEEEcCCChhhcCC--CCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 295 EIFGDELQMFAKKELQKEICSLLRGGIAERGG--VRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 295 ~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g--L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
.+|||.+.++.....+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+.+.
T Consensus 29 ~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~ 93 (107)
T 3nfk_A 29 GRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASC 93 (107)
T ss_dssp SCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGG
T ss_pred CCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 68999998765544568999999999999999 9999999999999999999999999998764
No 83
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.08 E-value=2.2e-10 Score=90.27 Aligned_cols=82 Identities=21% Similarity=0.216 Sum_probs=63.4
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH--------HHHhhc-C
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--------YMEFLK-A 273 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--------~~~~~~-~ 273 (359)
..++|.|.|..+++|||++.++.......+++|..|.++|||+++|+|++||+|++|||+++.+ +++... .
T Consensus 5 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 84 (108)
T 3cbz_A 5 NIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHK 84 (108)
T ss_dssp CEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTS
T ss_pred eEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccC
Confidence 4567889886667999999864211123578999999999999999999999999999999876 344442 1
Q ss_pred CCeEEEEEEeC
Q psy5022 274 NGIEDHSFVKE 284 (359)
Q Consensus 274 ~~~v~l~v~~~ 284 (359)
++.++|+|.|.
T Consensus 85 ~~~v~l~v~R~ 95 (108)
T 3cbz_A 85 PGPIVLTVAKS 95 (108)
T ss_dssp SSCEEEEEECC
T ss_pred CCeEEEEEEeC
Confidence 34699998875
No 84
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=3.7e-10 Score=90.26 Aligned_cols=65 Identities=25% Similarity=0.416 Sum_probs=56.7
Q ss_pred ccccccCcEEecccc-----cccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAK-----KELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~-----~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.++.. ...+.+|.+|.++|||+++| |++||+|++|||+++.++++++++.+|+.+
T Consensus 32 k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 102 (117)
T 2byg_A 32 KGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNT 102 (117)
T ss_dssp CBTTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred eCCCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 455789999987543 23467999999999999999 999999999999999999999999999865
No 85
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.07 E-value=3.6e-10 Score=88.43 Aligned_cols=65 Identities=20% Similarity=0.391 Sum_probs=56.3
Q ss_pred ccccccCcEEeccccc-----ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKK-----ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~-----~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.++... ..+.+|.+|.++|||+++| |++||+|++|||+++.++++.+++.+++.+
T Consensus 11 k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (105)
T 2awx_A 11 KGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNT 81 (105)
T ss_dssp CBTTBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSC
T ss_pred ECCCCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4456899999876432 2467999999999999999 999999999999999999999999999865
No 86
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.07 E-value=3.1e-10 Score=92.60 Aligned_cols=64 Identities=22% Similarity=0.327 Sum_probs=56.4
Q ss_pred cccccCcEEeccccc---ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 293 SQEIFGDELQMFAKK---ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~---~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
...+|||.+.++... ..+.+|..|.++|||+++| |++||+|++|||+++.+++|++++++|+++
T Consensus 46 ~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~ 113 (131)
T 1wfg_A 46 SGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILES 113 (131)
T ss_dssp SCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHT
T ss_pred CCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 467899999865433 2367999999999999999 999999999999999999999999999986
No 87
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.07 E-value=8.8e-10 Score=84.50 Aligned_cols=80 Identities=26% Similarity=0.361 Sum_probs=62.5
Q ss_pred ccEEEEeeCC-CCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCCC
Q psy5022 203 LQKEVVVPKA-KGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KANG 275 (359)
Q Consensus 203 ~~~~v~l~r~-~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~ 275 (359)
...+|.|.|. .+.+|||.+.+.. ...+++|..|.++|||+++|+|++||+|++|||.++.+ ....+ ..+.
T Consensus 3 ~~~~v~l~k~~~~~~lG~~~~~~~---~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~ 79 (95)
T 2vwr_A 3 EILQVALHKRDSGEQLGIKLVRRT---DEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGE 79 (95)
T ss_dssp EEEEEEEECSSTTCCCCEEEEECS---SSCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred EEEEEEEEECCCCCcccEEEEecc---CCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 3457889985 4578999998532 23579999999999999999999999999999999865 22222 3567
Q ss_pred eEEEEEEeCc
Q psy5022 276 IEDHSFVKEM 285 (359)
Q Consensus 276 ~v~l~v~~~~ 285 (359)
.++|.+.|+.
T Consensus 80 ~v~l~v~R~~ 89 (95)
T 2vwr_A 80 RVNLTIARPG 89 (95)
T ss_dssp EEEEEEEEES
T ss_pred EEEEEEEcCC
Confidence 8999988753
No 88
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=7e-10 Score=88.65 Aligned_cols=88 Identities=23% Similarity=0.304 Sum_probs=66.2
Q ss_pred hhhhhcccccEEEEeeCCCCCccceEEEecCCCC----cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH----
Q psy5022 195 LQMFAKKELQKEVVVPKAKGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA---- 266 (359)
Q Consensus 195 ~~~~~~~~~~~~v~l~r~~~~~lG~~i~~~~~g~----~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~---- 266 (359)
.+.+..+...+++.+.|.. .+|||+|.++. +. ...+++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 16 ~s~y~~~~~~~~v~l~k~~-~glG~~i~gg~-~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~ 93 (117)
T 2byg_A 16 ENLYFQSMTVVEIKLFKGP-KGLGFSIAGGV-GNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHE 93 (117)
T ss_dssp ----CEEEEEEEEEEECBT-TBSSEEEEECT-TSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHH
T ss_pred cccccCCCceEEEEEEeCC-CCcCEEEEccc-CCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 3445566677789998886 69999998642 11 12478999999999999999999999999999999874
Q ss_pred -HHHhhc-CCCeEEEEEEeC
Q psy5022 267 -YMEFLK-ANGIEDHSFVKE 284 (359)
Q Consensus 267 -~~~~~~-~~~~v~l~v~~~ 284 (359)
++..++ .+..++|+|.|.
T Consensus 94 ~~~~~l~~~g~~v~l~v~R~ 113 (117)
T 2byg_A 94 EAVAILKNTSEVVYLKVGKP 113 (117)
T ss_dssp HHHHHHHTCCSEEEEEEEEE
T ss_pred HHHHHHHcCCCeEEEEEEeC
Confidence 333333 456889988875
No 89
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=4.2e-10 Score=85.66 Aligned_cols=61 Identities=16% Similarity=0.241 Sum_probs=53.9
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.+. .+.+|..|.++|||+++||++||+|++|||+++.++++.++.+++++.
T Consensus 11 ~~~~g~G~~l~~~----~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 71 (91)
T 2f5y_A 11 RGKDGFGFTICCD----SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSC 71 (91)
T ss_dssp CBTTBTSEEEECS----SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred eCCCCccEEEecC----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4556789998742 368999999999999999999999999999999999999999999864
No 90
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.07 E-value=4.2e-10 Score=87.50 Aligned_cols=65 Identities=20% Similarity=0.273 Sum_probs=56.6
Q ss_pred ccccccCcEEeccccc-----ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKK-----ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~-----~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.++... ..+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 12 k~~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 82 (102)
T 2i1n_A 12 RGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEA 82 (102)
T ss_dssp CBTTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHS
T ss_pred ECCCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4567899999875432 3477999999999999999 999999999999999999999999999863
No 91
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.07 E-value=4.1e-10 Score=87.39 Aligned_cols=65 Identities=17% Similarity=0.290 Sum_probs=56.6
Q ss_pred ccccccCcEEeccccc-----ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKK-----ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~-----~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.++... ..+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 15 ~~~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 85 (101)
T 2jik_A 15 RGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA 85 (101)
T ss_dssp CCTTCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTC
T ss_pred eCCCCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4557899999875442 3467999999999999999 999999999999999999999999999864
No 92
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=5.1e-10 Score=87.86 Aligned_cols=65 Identities=18% Similarity=0.293 Sum_probs=56.5
Q ss_pred ccccccCcEEecccc--------cccCcEEEEEcCCChhhcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAK--------KELQKEICSLLRGGIAERG-GVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~--------~~~~~~I~~v~~gs~A~~~-gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.++.. ...+.+|..|.++|||+++ ||++||+|++|||+++.+++|.+++.+++..
T Consensus 16 k~~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 89 (107)
T 1uhp_A 16 RDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKTA 89 (107)
T ss_dssp CSSSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred eCCCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 456789999987542 2346899999999999998 9999999999999999999999999999864
No 93
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.07 E-value=2.6e-10 Score=87.18 Aligned_cols=62 Identities=23% Similarity=0.396 Sum_probs=53.2
Q ss_pred cccCcEEecccc-cccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 295 EIFGDELQMFAK-KELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 295 ~~~G~~~~~~~~-~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
.+|||.+..... ...+.+|..|.++|||+++||++||+|++|||+++.+++++++.+++++.
T Consensus 20 ~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~~~ 82 (94)
T 3kzd_A 20 DTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQP 82 (94)
T ss_dssp -CCSEEEEEECSSSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHSS
T ss_pred CCcCEEEEecCCCCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhCC
Confidence 478999986432 23367899999999999999999999999999999999999999998753
No 94
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.06 E-value=4e-10 Score=86.18 Aligned_cols=65 Identities=23% Similarity=0.410 Sum_probs=55.8
Q ss_pred ccccccCcEEeccccc-----ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKK-----ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~-----~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.++... ..+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 11 k~~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (94)
T 2fe5_A 11 KGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNT 81 (94)
T ss_dssp CCTTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTC
T ss_pred ECCCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4457899999875432 2367999999999999999 999999999999999999999999998865
No 95
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.06 E-value=3.9e-10 Score=88.12 Aligned_cols=62 Identities=21% Similarity=0.332 Sum_probs=56.0
Q ss_pred ccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 294 QEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
...|||.+..+.....+.+|..|.++|||+++||++||+|++|||+++.++++++++++|+.
T Consensus 26 ~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~ 87 (104)
T 1wi2_A 26 GAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT 87 (104)
T ss_dssp TCCCSEEEECCSSSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred CCCccEEEEcccCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC
Confidence 37899999876554557899999999999999999999999999999999999999999986
No 96
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.06 E-value=2.4e-10 Score=89.15 Aligned_cols=64 Identities=25% Similarity=0.308 Sum_probs=56.0
Q ss_pred cccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 293 SQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
...+|||.+.++.....+.+|.+|.++|||+++||++||+|++|||+++.++++.+++.+++..
T Consensus 13 ~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 76 (103)
T 1wf7_A 13 GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKAC 76 (103)
T ss_dssp SSSCCSCCEEEETTTTEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHHC
T ss_pred CCCccCEEEeccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4567899998765555567899999999999999999999999999999999999999888764
No 97
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.06 E-value=1.4e-10 Score=88.93 Aligned_cols=65 Identities=20% Similarity=0.188 Sum_probs=56.8
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.++.....+.+|..|.++|||+++||++||+|++|||+++.++++.++.++|+..
T Consensus 13 ~~~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 77 (94)
T 1vb7_A 13 AGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQS 77 (94)
T ss_dssp CSSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred cCCCCccEEEecccCCCCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45567899998755444567899999999999999999999999999999999999999999865
No 98
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.05 E-value=8.4e-10 Score=87.03 Aligned_cols=83 Identities=23% Similarity=0.350 Sum_probs=63.4
Q ss_pred cccccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH--------HHHhh
Q psy5022 200 KKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--------YMEFL 271 (359)
Q Consensus 200 ~~~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--------~~~~~ 271 (359)
.+...+.+.+.|. .+|||++.++......++++|..|.++|||+++|+|++||+|++|||+++.+ +++..
T Consensus 12 ~~~~~~~v~l~k~--~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~ 89 (109)
T 1wi4_A 12 RDPAFRVITVTKE--TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRA 89 (109)
T ss_dssp CCTTEEEEEECCS--SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHS
T ss_pred CCCcEEEEEEeCC--CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcc
Confidence 3455678888886 5899999864321123478999999999999999999999999999999875 44443
Q ss_pred c--CCCeEEEEEEeC
Q psy5022 272 K--ANGIEDHSFVKE 284 (359)
Q Consensus 272 ~--~~~~v~l~v~~~ 284 (359)
. .+..+++.+.|.
T Consensus 90 ~~r~~~~~~l~v~R~ 104 (109)
T 1wi4_A 90 KLRSESPWEIAFIRS 104 (109)
T ss_dssp CCSSSSCEEEEEECC
T ss_pred ccCCCceEEEEEEeC
Confidence 3 356788888775
No 99
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.05 E-value=3.8e-10 Score=92.18 Aligned_cols=64 Identities=34% Similarity=0.494 Sum_probs=55.7
Q ss_pred cccccCcEEecccccc------------cCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 293 SQEIFGDELQMFAKKE------------LQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~------------~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
...+|||.+.++.... .+.+|..|.++|||+++||++||+|++|||+++.++++++++.+|++.
T Consensus 37 ~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 112 (132)
T 3l4f_D 37 DSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQG 112 (132)
T ss_dssp TTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHHHHHHHHT
T ss_pred CCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4578999998764321 146999999999999999999999999999999999999999999873
No 100
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.05 E-value=4.2e-10 Score=90.38 Aligned_cols=87 Identities=28% Similarity=0.378 Sum_probs=59.4
Q ss_pred hhcccccEEEEeeCCCCCccceEEEecCCCC--cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHh
Q psy5022 198 FAKKELQKEVVVPKAKGEILGVVIVESGWGS--MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEF 270 (359)
Q Consensus 198 ~~~~~~~~~v~l~r~~~~~lG~~i~~~~~g~--~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~ 270 (359)
...+...++|.|.|..+++|||++.++. +. ...+++|..|.++|||+++|.|++||+|++|||.++.+ .+..
T Consensus 19 ~s~~~~~~~v~l~k~~~~~lGf~i~gg~-~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~ 97 (120)
T 2iwo_A 19 YFQSMGLRTVEMKKGPTDSLGISIAGGV-GSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNL 97 (120)
T ss_dssp ------CEEEEEEC----CCCEEEEEEE-EETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHH
T ss_pred CCCCCCcEEEEEEcCCCCCCCEEEeccc-CCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3445667889999988779999998532 11 12368999999999999993399999999999999876 3332
Q ss_pred hc-CCCeEEEEEEeCc
Q psy5022 271 LK-ANGIEDHSFVKEM 285 (359)
Q Consensus 271 ~~-~~~~v~l~v~~~~ 285 (359)
++ .++.++|+|.|..
T Consensus 98 l~~~~~~v~l~v~r~g 113 (120)
T 2iwo_A 98 LKNASGSIEMQVVAGG 113 (120)
T ss_dssp HHHCCSEEEEEEECCT
T ss_pred HHcCCCeEEEEEEECC
Confidence 22 3557999988753
No 101
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.05 E-value=3e-10 Score=88.86 Aligned_cols=65 Identities=26% Similarity=0.409 Sum_probs=56.9
Q ss_pred ccccccCcEEecccc------cccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAK------KELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~------~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.++.. ...+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+.+
T Consensus 15 ~~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 86 (105)
T 1wha_A 15 RSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAA 86 (105)
T ss_dssp CCTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSC
T ss_pred eCCCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 455679999987543 23578999999999999999 999999999999999999999999999865
No 102
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.05 E-value=5.4e-10 Score=86.17 Aligned_cols=65 Identities=18% Similarity=0.265 Sum_probs=56.0
Q ss_pred ccccccCcEEecccccc-cCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKKE-LQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~-~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.++.... .+.+|.+|.++|||+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 12 ~~~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 78 (98)
T 2opg_A 12 KGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQT 78 (98)
T ss_dssp CBTTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred ECCCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 44568999998654332 467999999999999999 999999999999999999999999998864
No 103
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.04 E-value=2.5e-10 Score=91.48 Aligned_cols=66 Identities=18% Similarity=0.285 Sum_probs=57.9
Q ss_pred cccccCcEEeccccc-ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 293 SQEIFGDELQMFAKK-ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~-~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
...+|||.+.++... ..+.+|..|.++|||+++| |++||+|++|||+++.+++|.+++.+++...+
T Consensus 25 ~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~ 92 (119)
T 1x6d_A 25 EGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQARE 92 (119)
T ss_dssp TTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTS
T ss_pred CCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 467899999876542 3478999999999999999 99999999999999999999999999987654
No 104
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=3.3e-10 Score=90.72 Aligned_cols=64 Identities=16% Similarity=0.269 Sum_probs=56.5
Q ss_pred ccccCcEEecccccccCcEEEEEcCCChhhcC--CCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 294 QEIFGDELQMFAKKELQKEICSLLRGGIAERG--GVRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~--gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
...|||.+.++.....+.+|..|.++|||+++ ||++||+|++|||+++.+++|.+++.+++.+.
T Consensus 26 ~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~ 91 (119)
T 2cs5_A 26 NGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASC 91 (119)
T ss_dssp SSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHH
T ss_pred CCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 35699999876554456899999999999998 99999999999999999999999999998763
No 105
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.04 E-value=6.8e-10 Score=87.47 Aligned_cols=65 Identities=34% Similarity=0.491 Sum_probs=55.6
Q ss_pred ccccccCcEEecccccc------------cCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKKE------------LQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~------------~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.+..... .+.+|..|.++|||+++||++||+|++|||+++.+++|.+++.+++.+
T Consensus 16 ~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 92 (109)
T 1q3o_A 16 KDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQG 92 (109)
T ss_dssp CTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHT
T ss_pred CCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45678999998654311 146899999999999999999999999999999999999999999864
No 106
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.04 E-value=4.1e-10 Score=87.83 Aligned_cols=64 Identities=20% Similarity=0.311 Sum_probs=54.9
Q ss_pred cccCcEEecccc------------cccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 295 EIFGDELQMFAK------------KELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 295 ~~~G~~~~~~~~------------~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
..|||++.++.. ...+.+|..|.++|||+++||++||+|++|||+++.+++|++++.+|+...|
T Consensus 19 ~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g 94 (104)
T 3sfj_A 19 LILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSE 94 (104)
T ss_dssp EECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTCTTC
T ss_pred CcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 468999985433 1335789999999999999999999999999999999999999999987655
No 107
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=3.7e-10 Score=90.24 Aligned_cols=63 Identities=21% Similarity=0.307 Sum_probs=55.1
Q ss_pred ccccCcEEeccccc-----ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 294 QEIFGDELQMFAKK-----ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 294 ~~~~G~~~~~~~~~-----~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
..+|||.+.++... ..+.+|..|.++|||+++| |++||+|++|||+++.+++|++++.+|+.+
T Consensus 29 ~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~ 97 (117)
T 1ujd_A 29 GNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQ 97 (117)
T ss_dssp CCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSCC
T ss_pred CCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Confidence 36899999876432 2367899999999999998 999999999999999999999999999874
No 108
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.04 E-value=8e-10 Score=85.19 Aligned_cols=83 Identities=23% Similarity=0.405 Sum_probs=63.4
Q ss_pred cccEEEEeeCCCCCccceEEEecCCC----CcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWG----SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL- 271 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g----~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~- 271 (359)
+..+++.|.|....+|||++.++... ....+++|..|.++|||+++|+|++||+|++|||.++.+ +...+
T Consensus 4 e~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 83 (98)
T 1ihj_A 4 ELIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIK 83 (98)
T ss_dssp CEEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ceEEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 34567999997678999999754211 012368999999999999999999999999999999866 22222
Q ss_pred cCCCeEEEEEEeC
Q psy5022 272 KANGIEDHSFVKE 284 (359)
Q Consensus 272 ~~~~~v~l~v~~~ 284 (359)
..+..++|++.|+
T Consensus 84 ~~g~~v~l~v~R~ 96 (98)
T 1ihj_A 84 EADFKIELEIQTF 96 (98)
T ss_dssp HSCSEEEEEEEEC
T ss_pred cCCCeEEEEEEeC
Confidence 2567899998875
No 109
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.03 E-value=7.3e-10 Score=86.55 Aligned_cols=81 Identities=28% Similarity=0.295 Sum_probs=64.5
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhcCCCe
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLKANGI 276 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~~~~~ 276 (359)
...++|.|.|..+..|||.+.++.. ...+++|..|.++|||+++| |++||+|++|||.++.+ ++..++.+..
T Consensus 14 ~~~~~v~l~k~~~~~lG~~~~~~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 90 (104)
T 1wi2_A 14 FLPRIVTLKKPPGAQLGFNIRGGKA--SQLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKTARE 90 (104)
T ss_dssp SCCEEEEECCCTTCCCSEEEECCSS--SCCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHHSSS
T ss_pred CCCEEEEEEeCCCCCccEEEEcccC--CCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCE
Confidence 3457899999987799999985321 12478999999999999999 99999999999998865 4444555678
Q ss_pred EEEEEEeCc
Q psy5022 277 EDHSFVKEM 285 (359)
Q Consensus 277 v~l~v~~~~ 285 (359)
+.|+|.+..
T Consensus 91 v~l~v~r~~ 99 (104)
T 1wi2_A 91 ISMRVRFFS 99 (104)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEECC
Confidence 999888653
No 110
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.03 E-value=1.6e-09 Score=84.65 Aligned_cols=83 Identities=28% Similarity=0.308 Sum_probs=63.6
Q ss_pred cccEEEEeeCCCCCccceEEEecCCC---CcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWG---SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK- 272 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g---~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~- 272 (359)
+..++|.|.|.. .+|||++.++..- ....+++|..|.++|||+++|+|++||+|++|||.++.+ .+..++
T Consensus 2 e~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (105)
T 2awx_A 2 EKIMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKN 80 (105)
T ss_dssp -CEEEEEEECBT-TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHS
T ss_pred CeEEEEEEEECC-CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 456689999986 5999999864210 112478999999999999999999999999999999865 333333
Q ss_pred CCCeEEEEEEeCc
Q psy5022 273 ANGIEDHSFVKEM 285 (359)
Q Consensus 273 ~~~~v~l~v~~~~ 285 (359)
.+..+.|.|.|..
T Consensus 81 ~~~~v~l~v~R~~ 93 (105)
T 2awx_A 81 TSDFVYLKVAKPT 93 (105)
T ss_dssp CCSEEEEEEECCC
T ss_pred CCCeEEEEEEcCC
Confidence 4568899998764
No 111
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.03 E-value=2e-09 Score=81.72 Aligned_cols=78 Identities=22% Similarity=0.305 Sum_probs=60.6
Q ss_pred ccEEEEeeCCCC-CccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCCC
Q psy5022 203 LQKEVVVPKAKG-EILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KANG 275 (359)
Q Consensus 203 ~~~~v~l~r~~~-~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~ 275 (359)
..+++.|.|..+ ..|||.+.++. ...+++|..|.++|||+++| |++||+|++|||.++.+ .+..+ ..+.
T Consensus 6 ~~~~v~l~k~~~~~~~G~~~~~~~---~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~ 81 (91)
T 1m5z_A 6 ELHKVTLYKDSGMEDFGFSVADGL---LEKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGN 81 (91)
T ss_dssp EEEEEEEECCTTCSSSSEEEEECT---TSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTSTT
T ss_pred ceEEEEEEECCCCCCccEEEEecc---CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 456788988765 58999998532 23578999999999999999 99999999999998876 22222 3466
Q ss_pred eEEEEEEeC
Q psy5022 276 IEDHSFVKE 284 (359)
Q Consensus 276 ~v~l~v~~~ 284 (359)
.+.|.+.|+
T Consensus 82 ~v~l~v~R~ 90 (91)
T 1m5z_A 82 KLDLVISRN 90 (91)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEeC
Confidence 788888764
No 112
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.02 E-value=1e-09 Score=83.21 Aligned_cols=78 Identities=21% Similarity=0.368 Sum_probs=60.4
Q ss_pred cEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH--------HHHhhcCCC
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--------YMEFLKANG 275 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--------~~~~~~~~~ 275 (359)
.+++.|.|.. .+|||.+.++.. ...+++|..|.++|||+++|+|++||+|++|||.++.+ +++....++
T Consensus 3 ~~~v~l~~~~-~g~G~~~~~g~~--~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 79 (90)
T 2q9v_A 3 EQDIFLWRKE-TGFGFRILGGNE--PGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQG 79 (90)
T ss_dssp EEEEEEECBT-TBCCEEEEECSS--TTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHT
T ss_pred cEEEEEEECC-CccCEEEEcccc--CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 4678899886 589999985421 12358999999999999999999999999999999844 344443344
Q ss_pred eEEEEEEeC
Q psy5022 276 IEDHSFVKE 284 (359)
Q Consensus 276 ~v~l~v~~~ 284 (359)
.++|++.|.
T Consensus 80 ~v~l~v~R~ 88 (90)
T 2q9v_A 80 HVNLTVRQT 88 (90)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEec
Confidence 788888764
No 113
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.02 E-value=8.6e-10 Score=88.44 Aligned_cols=66 Identities=17% Similarity=0.279 Sum_probs=57.3
Q ss_pred eccccccCcEEeccccc-----ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 291 LNSQEIFGDELQMFAKK-----ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~-----~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
.+...+|||.+.++... ..+.+|.+|.++|||+++| |++||+|++|||+++.++++.+++.+++.+
T Consensus 24 ~r~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 95 (120)
T 2eno_A 24 TRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA 95 (120)
T ss_dssp ECCSSSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHH
T ss_pred EECCCCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 34558899999975442 3477999999999999999 999999999999999999999999999864
No 114
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.02 E-value=3.3e-10 Score=90.72 Aligned_cols=63 Identities=22% Similarity=0.247 Sum_probs=54.8
Q ss_pred ccccCcEEecccccc-cCcEEEEEcCCChhhcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 294 QEIFGDELQMFAKKE-LQKEICSLLRGGIAERG-GVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~-~~~~I~~v~~gs~A~~~-gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
..+|||.+.++.... .+.+|.+|.++|||+++ ||++||+|++|||+++.+++|++++++|++.
T Consensus 27 ~~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 91 (118)
T 1v6b_A 27 EGSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKA 91 (118)
T ss_dssp CSCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHH
T ss_pred CCccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 358999998764433 24789999999999997 8999999999999999999999999999875
No 115
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.02 E-value=2.8e-10 Score=85.03 Aligned_cols=61 Identities=25% Similarity=0.406 Sum_probs=53.4
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+... .+.+|..|.++|||+++||++||+|++|||+++.++++++++.+++.+
T Consensus 10 ~~~~g~G~~~~~~----~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 70 (83)
T 2kv8_A 10 RGRAGYGFTLSGQ----APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKC 70 (83)
T ss_dssp CCSSCCSCBCCCS----SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTC
T ss_pred eCCCcccEEEEcC----CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4456789887642 367899999999999999999999999999999999999999999764
No 116
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.02 E-value=1.9e-10 Score=89.77 Aligned_cols=66 Identities=15% Similarity=0.146 Sum_probs=56.7
Q ss_pred eccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 291 LNSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
.+....|||.+..+.....+.+|..|.++|||+++||++||+|++|||+++.+++++++.++|+.+
T Consensus 11 ~~~~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 76 (103)
T 1v5l_A 11 LPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAA 76 (103)
T ss_dssp EESSSCCSBCCEEETTTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTC
T ss_pred EcCCCCcCEEEeccccCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 345568899988654433467899999999999999999999999999999999999999999875
No 117
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.02 E-value=6.8e-10 Score=86.61 Aligned_cols=64 Identities=25% Similarity=0.347 Sum_probs=55.7
Q ss_pred ccccccCcEEeccccc--ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 292 NSQEIFGDELQMFAKK--ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~--~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
+...+|||.+.+.... ..+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+++.
T Consensus 19 ~~~~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 85 (104)
T 2djt_A 19 RGYAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRA 85 (104)
T ss_dssp CCSSSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHH
T ss_pred eCCCCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4456899999865432 4578999999999999999 99999999999999999999999999886
No 118
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.01 E-value=1.9e-09 Score=87.99 Aligned_cols=81 Identities=23% Similarity=0.337 Sum_probs=62.3
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCC----------cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----H
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGS----------MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----Y 267 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~----------~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~ 267 (359)
..+++.|.|...++|||+|.++.... ...+++|..|.++|||+++| |++||+|++|||.++.+ +
T Consensus 27 ~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~ 105 (132)
T 3l4f_D 27 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQV 105 (132)
T ss_dssp CCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHHHH
T ss_pred CCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 45679999977789999998653210 11268999999999999999 99999999999999875 3
Q ss_pred HHhhc-CCCeEEEEEEeC
Q psy5022 268 MEFLK-ANGIEDHSFVKE 284 (359)
Q Consensus 268 ~~~~~-~~~~v~l~v~~~ 284 (359)
+..++ .+..+.|+|.+.
T Consensus 106 ~~~l~~~g~~v~l~v~~~ 123 (132)
T 3l4f_D 106 VNMIRQGGNTLMVKVVMV 123 (132)
T ss_dssp HHHHHHTTTEEEEEEECC
T ss_pred HHHHHcCCCEEEEEEEEC
Confidence 33332 556788888764
No 119
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.01 E-value=1.5e-09 Score=86.66 Aligned_cols=83 Identities=24% Similarity=0.279 Sum_probs=64.5
Q ss_pred cccEEEEeeCCCCCccceEEEecC-------CCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHH
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESG-------WGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YME 269 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~-------~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~ 269 (359)
...++|.|.|..+++|||+|.++. .|....+++|..|.++|||+++|+|++||+|++|||.++.+ ++.
T Consensus 14 ~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 93 (117)
T 2ehr_A 14 GPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVE 93 (117)
T ss_dssp CCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHH
T ss_pred CCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 456789999987789999997542 11223589999999999999999999999999999999865 333
Q ss_pred hhc-CCCeEEEEEEeC
Q psy5022 270 FLK-ANGIEDHSFVKE 284 (359)
Q Consensus 270 ~~~-~~~~v~l~v~~~ 284 (359)
.++ .+..++|.|.+.
T Consensus 94 ~~~~~g~~v~l~v~r~ 109 (117)
T 2ehr_A 94 AIKNAGNPVVFIVQSL 109 (117)
T ss_dssp HHHTSCSSEEEEECCB
T ss_pred HHHcCCCeEEEEEEEC
Confidence 333 356788888764
No 120
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.01 E-value=1.7e-09 Score=83.16 Aligned_cols=82 Identities=20% Similarity=0.318 Sum_probs=60.8
Q ss_pred cccEEEEeeCCCCCccceEEEecCC----CC-cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGW----GS-MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL 271 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~----g~-~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~ 271 (359)
...++|.|.|..+++|||++.+.+. +. ...+++|..|.++|||+++| |++||+|++|||.++.+ +...+
T Consensus 3 ~~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 81 (96)
T 2ego_A 3 QQRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDII 81 (96)
T ss_dssp CCEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3457899999987899999985211 11 12368999999999999999 99999999999998765 22222
Q ss_pred c-CCCeEEEEEEeC
Q psy5022 272 K-ANGIEDHSFVKE 284 (359)
Q Consensus 272 ~-~~~~v~l~v~~~ 284 (359)
+ .++.++|+|.+.
T Consensus 82 ~~~~~~v~l~v~~~ 95 (96)
T 2ego_A 82 KASGNVLRLETLYG 95 (96)
T ss_dssp HHTTTEEEEEEECC
T ss_pred HhCCCeEEEEEEEC
Confidence 1 244788888653
No 121
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.01 E-value=4e-10 Score=86.91 Aligned_cols=62 Identities=24% Similarity=0.466 Sum_probs=54.2
Q ss_pred cccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 293 SQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
...++|+.+... ...+.+|.+|.++|||+++| |++||+|++|||+++.++++++++++|+.+
T Consensus 22 ~~~~lG~~l~~~--~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~ 84 (97)
T 2ejy_A 22 TEEPMGICLKLN--EKQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET 84 (97)
T ss_dssp SSSCCSEEEEEC--TTCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHC
T ss_pred CCCCeeEEEEeC--CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 456889998753 22478999999999999999 999999999999999998899999999875
No 122
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.01 E-value=1.3e-09 Score=83.72 Aligned_cols=80 Identities=19% Similarity=0.276 Sum_probs=61.8
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCC-cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCC
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGS-MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANG 275 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~-~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~ 275 (359)
..+.+.|.|... +|||++.... |. ...+++|..|.++|||+++| |++||+|++|||.++.+ +...++ .+.
T Consensus 3 ~~r~v~l~k~~~-~~G~~l~~~~-~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 79 (96)
T 2v90_A 3 KPRCLHLEKGPQ-GFGFLLREEK-GLDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQGS 79 (96)
T ss_dssp CCEEEEEECBTT-BSCEEEEEEE-CTTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred CCEEEEEEeCCC-cccEEEEecc-CCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 467899999864 9999997531 21 12368999999999999999 99999999999999866 333332 267
Q ss_pred eEEEEEEeCc
Q psy5022 276 IEDHSFVKEM 285 (359)
Q Consensus 276 ~v~l~v~~~~ 285 (359)
.+.|++.|+.
T Consensus 80 ~v~l~v~r~~ 89 (96)
T 2v90_A 80 CVSLTVVDPE 89 (96)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEEECCC
Confidence 8999988764
No 123
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.01 E-value=9.2e-10 Score=83.83 Aligned_cols=63 Identities=22% Similarity=0.367 Sum_probs=54.7
Q ss_pred cccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 293 SQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
...+|||.+.+... ..+.+|.+|.++|||+++| |++||+|++|||+++.+++++++..+++..
T Consensus 14 ~~~~lG~~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 77 (92)
T 2qg1_A 14 PGKGLGLSIVGKRN-DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCS 77 (92)
T ss_dssp TTSCCSEEEECCSS-SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CCCcccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 34688999986432 3478999999999999999 999999999999999999999999998864
No 124
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.01 E-value=1.6e-09 Score=82.76 Aligned_cols=76 Identities=24% Similarity=0.462 Sum_probs=62.8
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhcCCCe
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLKANGI 276 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~~~~~ 276 (359)
...+.+.|.|.. .+|||.+.+. .+++|..|.++|||+++| |++||+|++|||+++.+ ++..++.+..
T Consensus 7 ~~~r~v~l~~~~-~~~G~~l~~~------~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~g~~ 78 (93)
T 2dls_A 7 GVQRCVIIQKDQ-HGFGFTVSGD------RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIKSGAY 78 (93)
T ss_dssp CCEEEEEEECSS-SSCCEEEECS------SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHTSSSE
T ss_pred CCCEEEEEEeCC-CceeEEEeCC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcCCCE
Confidence 345678888875 5899998731 367899999999999999 99999999999999876 5566667889
Q ss_pred EEEEEEeCc
Q psy5022 277 EDHSFVKEM 285 (359)
Q Consensus 277 v~l~v~~~~ 285 (359)
++|++.|+.
T Consensus 79 v~l~v~R~~ 87 (93)
T 2dls_A 79 VALTLLGSS 87 (93)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEECC
Confidence 999998753
No 125
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.00 E-value=1.8e-09 Score=85.47 Aligned_cols=86 Identities=19% Similarity=0.268 Sum_probs=63.3
Q ss_pred hhhhcccccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHh
Q psy5022 196 QMFAKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEF 270 (359)
Q Consensus 196 ~~~~~~~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~ 270 (359)
..+..+...+++.+.|.. .+|||++.++.. ...+++|..|.++|||+++|+|++||+|++|||.++.+ ++..
T Consensus 17 t~~~~~~~~~~v~l~~~~-~glG~~l~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~ 93 (112)
T 2r4h_A 17 NLYFQSMDFYTVELERGA-KGFGFSLRGGRE--YNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIEL 93 (112)
T ss_dssp ------CCEEEEEEECBT-TBTSEEEEECGG--GTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred ccccCCCceEEEEEEcCC-CccCEEEecccc--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 344556677889998875 589999985321 23578999999999999999999999999999999865 3333
Q ss_pred hc-CCCeEEEEEEeC
Q psy5022 271 LK-ANGIEDHSFVKE 284 (359)
Q Consensus 271 ~~-~~~~v~l~v~~~ 284 (359)
++ .+..++|.|.|+
T Consensus 94 l~~~g~~v~l~v~R~ 108 (112)
T 2r4h_A 94 IKNGGRRVRLFLKRG 108 (112)
T ss_dssp HHTTTTEEEEEEECC
T ss_pred HHcCCCeEEEEEEeC
Confidence 33 466788988775
No 126
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.00 E-value=1.1e-09 Score=84.15 Aligned_cols=64 Identities=23% Similarity=0.300 Sum_probs=54.5
Q ss_pred ccccccCcEEecccc------cccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 292 NSQEIFGDELQMFAK------KELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~------~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
+...+|||.+.++.. ...+.+|..|.++|||+++||++||+|++|||+++.++++.+++..++.
T Consensus 11 ~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~ 80 (97)
T 2w4f_A 11 RQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRG 80 (97)
T ss_dssp CBTTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred eCCCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC
Confidence 456789999986533 2346789999999999999999999999999999999999888877765
No 127
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.00 E-value=2.7e-10 Score=92.43 Aligned_cols=65 Identities=22% Similarity=0.375 Sum_probs=56.8
Q ss_pred ccccccCcEEeccccc----ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKK----ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~----~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.++... ..+.+|.+|.++|||+++| |++||+|++|||+++.+++|++++++|+.+
T Consensus 34 ~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 103 (127)
T 1wg6_A 34 SGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRS 103 (127)
T ss_dssp STTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHH
T ss_pred CCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 4567899999875432 2367999999999999988 999999999999999999999999999975
No 128
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.00 E-value=1.5e-09 Score=82.28 Aligned_cols=78 Identities=26% Similarity=0.250 Sum_probs=60.6
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhc-CCCCCCCEEEEECCccHHH-----HHHhhc-CCC
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARC-GQLNIGDQIIAVNGVSLVA-----YMEFLK-ANG 275 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~-G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~ 275 (359)
..++|.+.|..+++|||.+.++.. ...+++|..|.++|||+++ | |++||+|++|||.++.+ .+..++ .+.
T Consensus 4 ~~~~v~l~k~~~~~lG~~i~~~~~--~~~g~~V~~V~~~spA~~agg-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~ 80 (90)
T 1qav_A 4 QRRRVTVRKADAGGLGISIKGGRE--NKMPILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSSATHDEAVQALKKTGK 80 (90)
T ss_dssp SCEEEEEECCTTTCCCEEEEEEGG--GTEEEEEEEECTTSHHHHTTC-CCTTEEEEEETTEECTTCCHHHHHHHHHTCCS
T ss_pred ccEEEEEEeCCCCCcCEEEEcccC--CCCCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 457899999877899999985321 1246899999999999999 7 99999999999999875 333333 456
Q ss_pred eEEEEEEe
Q psy5022 276 IEDHSFVK 283 (359)
Q Consensus 276 ~v~l~v~~ 283 (359)
.++|.+.|
T Consensus 81 ~v~l~v~r 88 (90)
T 1qav_A 81 EVVLEVKY 88 (90)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 78888765
No 129
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.00 E-value=3.3e-09 Score=80.96 Aligned_cols=80 Identities=29% Similarity=0.342 Sum_probs=61.7
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCC----cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK- 272 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~----~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~- 272 (359)
..++|.|.|.. .+|||++.++. +. ...+++|..|.++|||+++|+|++||+|++|||.++.+ ++..++
T Consensus 3 ~~~~v~l~k~~-~g~G~~i~gg~-~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (94)
T 2fe5_A 3 TIMEVNLLKGP-KGLGFSIAGGI-GNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKN 80 (94)
T ss_dssp CEEEEEEECCT-TCSCEEEEECB-TSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHT
T ss_pred EEEEEEEEECC-CCCCEEEEccc-CCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 45679999985 58999998642 21 12478999999999999999999999999999999865 333333
Q ss_pred CCCeEEEEEEeC
Q psy5022 273 ANGIEDHSFVKE 284 (359)
Q Consensus 273 ~~~~v~l~v~~~ 284 (359)
.+..++|++.|+
T Consensus 81 ~~~~v~l~v~R~ 92 (94)
T 2fe5_A 81 TSDMVYLKVAKP 92 (94)
T ss_dssp CCSEEEEEEECC
T ss_pred CCCeEEEEEEcC
Confidence 345788888764
No 130
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.00 E-value=9.1e-10 Score=84.76 Aligned_cols=63 Identities=29% Similarity=0.450 Sum_probs=54.0
Q ss_pred eccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 291 LNSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
.....++||.+... ..+.+|.+|.+||||+++||++||+|++|||.++...+++++...++.+
T Consensus 24 ~~~~~g~G~~l~~~---~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~ 86 (101)
T 3qik_A 24 LPQEEDYGFDIEEK---NKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQS 86 (101)
T ss_dssp CCCSSSSSEEEEEE---TTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHH
T ss_pred EeCCCcccEEEEcc---CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHh
Confidence 34567889998742 2356899999999999999999999999999999877899999999874
No 131
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.00 E-value=7.4e-10 Score=87.02 Aligned_cols=64 Identities=16% Similarity=0.314 Sum_probs=55.6
Q ss_pred ccccccCcEEecccc-----cccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 292 NSQEIFGDELQMFAK-----KELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~-----~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
+...+|||.+.++.. ...+.+|..|.++|||+++| |++||+|++|||+++.++++++++.+++.
T Consensus 22 ~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 91 (108)
T 2jre_A 22 KDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRN 91 (108)
T ss_dssp STTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHH
T ss_pred CCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 456789999986532 22367999999999999999 99999999999999999999999999986
No 132
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.00 E-value=1.5e-09 Score=83.11 Aligned_cols=60 Identities=22% Similarity=0.241 Sum_probs=52.6
Q ss_pred cccCcEEecccc--------cccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 295 EIFGDELQMFAK--------KELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 295 ~~~G~~~~~~~~--------~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
.+|||.+.++.. ...+.+|.+|.++|||++ ||++||+|++|||+++.++++.+++.+++.
T Consensus 13 ~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (95)
T 1mfg_A 13 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKT 80 (95)
T ss_dssp SSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHHH
T ss_pred CCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhhc
Confidence 479999987542 234678999999999999 999999999999999999999999999875
No 133
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.00 E-value=1.1e-09 Score=85.89 Aligned_cols=65 Identities=29% Similarity=0.551 Sum_probs=53.8
Q ss_pred ccccccCcEEecccccc-----------cC-cEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKKE-----------LQ-KEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~-----------~~-~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.+..... .+ .+|..|.++|||+++||++||+|++|||+++.++++++++.+|+++
T Consensus 14 k~~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 90 (107)
T 3qe1_A 14 KSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRAG 90 (107)
T ss_dssp CBTTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred ECCCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 44557999998652211 11 2599999999999999999999999999999999999999999863
No 134
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.00 E-value=7.6e-10 Score=85.53 Aligned_cols=65 Identities=28% Similarity=0.428 Sum_probs=53.7
Q ss_pred eccccccCcEEeccccc--c-----cCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 291 LNSQEIFGDELQMFAKK--E-----LQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~--~-----~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
.+...+|||.+...... . .+.+|..|.++|||+++||++||+|++|||+++.++++++++.+|+.
T Consensus 9 ~~~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~ 80 (99)
T 3khf_A 9 HSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLLK 80 (99)
T ss_dssp EC-CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred EeCCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 35677899998754321 1 13479999999999999999999999999999999999999999984
No 135
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.00 E-value=7.7e-10 Score=87.99 Aligned_cols=65 Identities=18% Similarity=0.214 Sum_probs=55.2
Q ss_pred ccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 294 QEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
...+||.+.++.....+.+|.+|.++|||+++| |++||+|++|||+++.+.+++++.++|+.+.+
T Consensus 35 ~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~ 100 (114)
T 2gzv_A 35 QNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKG 100 (114)
T ss_dssp TSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred CCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 355999998765444468999999999999999 99999999999999988899999999986543
No 136
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.00 E-value=2e-09 Score=82.18 Aligned_cols=79 Identities=24% Similarity=0.435 Sum_probs=61.1
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCC
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANG 275 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~ 275 (359)
+..+++.+.|. +++|||++... ....+++|..|.++|||+++|+|++||+|++|||.++.+ +...++ .++
T Consensus 3 ~~~r~v~l~k~-~~~lG~~i~~~---~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 78 (93)
T 3o46_A 3 DSVKIIRLVKN-REPLGATIKKD---EQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQG 78 (93)
T ss_dssp -CCEEEEEEES-SSCCCEEEEEC---TTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCE
T ss_pred ccEEEEEEEeC-CCCccEEEEec---CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 34678999998 46999999854 123578999999999999999999999999999999944 333332 334
Q ss_pred eEEEEEEeC
Q psy5022 276 IEDHSFVKE 284 (359)
Q Consensus 276 ~v~l~v~~~ 284 (359)
.++|.+.+.
T Consensus 79 ~v~l~v~~~ 87 (93)
T 3o46_A 79 AITFKIIPG 87 (93)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEeC
Confidence 788888764
No 137
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.00 E-value=1.4e-09 Score=84.25 Aligned_cols=81 Identities=22% Similarity=0.291 Sum_probs=65.2
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhcCCCe
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLKANGI 276 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~~~~~ 276 (359)
...+++.|.|.....|||.+..... ...+++|..|.++|||+++| |++||+|++|||.++.+ ++..++.+..
T Consensus 9 ~~~~~v~l~~~~~~~lG~~~~~~~~--~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~ 85 (100)
T 2eeh_A 9 DIIHSVRVEKSPAGRLGFSVRGGSE--HGLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTSSSR 85 (100)
T ss_dssp CEECCEEECCCSSSSCSEEEECCTT--TTCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHSCSS
T ss_pred CeEEEEEEEECCCCCccEEEEcccc--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcCCCE
Confidence 3456789999877789999985321 12478999999999999999 99999999999998866 5566666788
Q ss_pred EEEEEEeCc
Q psy5022 277 EDHSFVKEM 285 (359)
Q Consensus 277 v~l~v~~~~ 285 (359)
+.|.+.|+.
T Consensus 86 v~l~v~R~g 94 (100)
T 2eeh_A 86 LHMMVRRMG 94 (100)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEECC
Confidence 999998753
No 138
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.99 E-value=1.1e-09 Score=86.37 Aligned_cols=65 Identities=23% Similarity=0.374 Sum_probs=56.1
Q ss_pred ccccccCcEEeccccc---ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKK---ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~---~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.+.... ..+.+|..|.++|||+++| |++||+|++|||+++.++++++++++|+.+
T Consensus 19 ~~~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 87 (111)
T 2koj_A 19 KGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRST 87 (111)
T ss_dssp CBTTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHC
T ss_pred ECCCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4557899999865322 2467999999999999999 999999999999999999999999999875
No 139
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.99 E-value=5.3e-10 Score=87.30 Aligned_cols=64 Identities=27% Similarity=0.438 Sum_probs=55.3
Q ss_pred ccccCcEEeccc-------ccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 294 QEIFGDELQMFA-------KKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 294 ~~~~G~~~~~~~-------~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
...|||.+.+.. ....+.+|..|.++|||+++||++||+|++|||+++.++++++++++|+++.
T Consensus 26 ~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 96 (104)
T 2z17_A 26 NETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSG 96 (104)
T ss_dssp TSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHHHTT
T ss_pred CCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCC
Confidence 467999998632 1234679999999999999999999999999999999999999999999864
No 140
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.99 E-value=1.4e-09 Score=85.18 Aligned_cols=65 Identities=20% Similarity=0.419 Sum_probs=55.8
Q ss_pred ccccccCcEEecccc---cccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAK---KELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~---~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.++.. ...+.+|.+|.++|||+++| |++||+|++|||+++.++++.+++.+++.+
T Consensus 18 ~~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 86 (106)
T 3axa_A 18 KKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRT 86 (106)
T ss_dssp ECSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred CCCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 556789999986432 23467999999999999999 999999999999999999999999999763
No 141
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.99 E-value=1.2e-09 Score=88.61 Aligned_cols=87 Identities=20% Similarity=0.222 Sum_probs=66.5
Q ss_pred hcccccEEEEeeCCCCCccceEEEecCC-CCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHH-H-----HHHhh
Q psy5022 199 AKKELQKEVVVPKAKGEILGVVIVESGW-GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV-A-----YMEFL 271 (359)
Q Consensus 199 ~~~~~~~~v~l~r~~~~~lG~~i~~~~~-g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~-~-----~~~~~ 271 (359)
......++|.|.|....+|||.+.++.. .....+++|..|.++|||+++|+|++||+|++|||.++. + ++..+
T Consensus 21 ~~~~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l 100 (128)
T 2db5_A 21 AQGRQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALL 100 (128)
T ss_dssp HTTCEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHH
T ss_pred cccCceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHH
Confidence 3445667899999876799999985421 111237899999999999999999999999999999997 4 33333
Q ss_pred c-CCCeEEEEEEeCc
Q psy5022 272 K-ANGIEDHSFVKEM 285 (359)
Q Consensus 272 ~-~~~~v~l~v~~~~ 285 (359)
+ .+..++|+|.|..
T Consensus 101 ~~~~~~v~l~v~r~~ 115 (128)
T 2db5_A 101 QQTTGSLRLIVAREP 115 (128)
T ss_dssp HHCCSEEEEEEEECC
T ss_pred HcCCCeEEEEEEcCC
Confidence 2 4568999988763
No 142
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.99 E-value=3e-09 Score=80.63 Aligned_cols=78 Identities=23% Similarity=0.249 Sum_probs=61.8
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhcC-CCe
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLKA-NGI 276 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~~-~~~ 276 (359)
..+.+.|.|... +|||.+.+... ..+++|..|.++|||+++| |++||+|++|||.++.+ +...++. +..
T Consensus 4 ~~r~v~l~k~~~-g~G~~~~~~~~---~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 78 (90)
T 2he4_A 4 RPRLCHLRKGPQ-GYGFNLHSDKS---RPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDE 78 (90)
T ss_dssp CCEEEEEECBTT-BCCEEEEECSS---SSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSSSE
T ss_pred CcEEEEEEECCC-CccEEEEccCC---CCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCc
Confidence 457899999864 89999985431 3578999999999999999 99999999999999866 3333332 568
Q ss_pred EEEEEEeCc
Q psy5022 277 EDHSFVKEM 285 (359)
Q Consensus 277 v~l~v~~~~ 285 (359)
+.|.+.|..
T Consensus 79 v~l~v~r~~ 87 (90)
T 2he4_A 79 ARLLVVGPS 87 (90)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEccC
Confidence 889888753
No 143
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.99 E-value=2.4e-09 Score=83.16 Aligned_cols=82 Identities=26% Similarity=0.312 Sum_probs=62.8
Q ss_pred ccEEEEeeCCCCCccceEEEecCC---CCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cC
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGW---GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KA 273 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~---g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~ 273 (359)
..++|.|.|.. .+|||++.++.. .....+++|..|.++|||+++|+|++||+|++|||.++.+ ++..+ ..
T Consensus 4 ~~~~v~l~k~~-~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 82 (102)
T 2i1n_A 4 KYEEIVLERGN-SGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEA 82 (102)
T ss_dssp EEEEEEEECBT-TBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHS
T ss_pred eEEEEEEEECC-CcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 35678998874 599999986421 1123588999999999999999999999999999999865 22222 24
Q ss_pred CCeEEEEEEeCc
Q psy5022 274 NGIEDHSFVKEM 285 (359)
Q Consensus 274 ~~~v~l~v~~~~ 285 (359)
+..+.|.+.|..
T Consensus 83 g~~v~l~v~R~~ 94 (102)
T 2i1n_A 83 GPVVRLVVRRRQ 94 (102)
T ss_dssp CSEEEEEEEEEC
T ss_pred CCeEEEEEEeCC
Confidence 678999988753
No 144
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.98 E-value=1e-09 Score=87.11 Aligned_cols=63 Identities=30% Similarity=0.554 Sum_probs=54.3
Q ss_pred cccccCcEEecccccc-------cCcEEEEEcCCChhhc-CCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 293 SQEIFGDELQMFAKKE-------LQKEICSLLRGGIAER-GGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~-------~~~~I~~v~~gs~A~~-~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
...+|||.+.++.... .+.+|..|.++|||++ +||++||+|++|||+++.++++++++++|++
T Consensus 20 ~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~~ 90 (114)
T 1uew_A 20 ENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKD 90 (114)
T ss_dssp TTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHHH
T ss_pred CCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4578999998653221 1459999999999999 9999999999999999999999999999986
No 145
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.98 E-value=1.1e-09 Score=83.84 Aligned_cols=62 Identities=26% Similarity=0.342 Sum_probs=53.9
Q ss_pred ccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 294 QEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
..+|||.+.+... ..+.+|.+|.++|||+++| |++||+|++|||+++.++++.+++.+++.+
T Consensus 15 ~~~lG~~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 77 (95)
T 2vwr_A 15 GEQLGIKLVRRTD-EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQAS 77 (95)
T ss_dssp TCCCCEEEEECSS-SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CCcccEEEEeccC-CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4678999976433 3478999999999999999 999999999999999999999999988754
No 146
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.98 E-value=8.5e-10 Score=88.01 Aligned_cols=87 Identities=21% Similarity=0.210 Sum_probs=66.0
Q ss_pred hcccccEEEEeeCCCCCccceEEEecCCC-CcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHH-H-----HHHhh
Q psy5022 199 AKKELQKEVVVPKAKGEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV-A-----YMEFL 271 (359)
Q Consensus 199 ~~~~~~~~v~l~r~~~~~lG~~i~~~~~g-~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~-~-----~~~~~ 271 (359)
......+++.|.|..+.+|||++.++... ....+++|..|.++|||+++|+|++||+|++|||.++. + ++..+
T Consensus 16 ~~~~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l 95 (117)
T 2o2t_A 16 AQGRHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISIL 95 (117)
T ss_dssp HTTSCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHH
T ss_pred ccCCeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHH
Confidence 33456778999998777999999854211 11247899999999999999999999999999999997 3 33222
Q ss_pred c-CCCeEEEEEEeCc
Q psy5022 272 K-ANGIEDHSFVKEM 285 (359)
Q Consensus 272 ~-~~~~v~l~v~~~~ 285 (359)
+ .+..+.|.+.|+.
T Consensus 96 ~~~~~~v~l~v~R~~ 110 (117)
T 2o2t_A 96 QKAKDTVQLVIARGS 110 (117)
T ss_dssp HHCCSEEEEEEESSC
T ss_pred HcCCCEEEEEEEeCC
Confidence 2 5678999988763
No 147
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.98 E-value=3.2e-10 Score=88.27 Aligned_cols=64 Identities=28% Similarity=0.430 Sum_probs=55.3
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
+...+|||.+.++.....+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+++.
T Consensus 19 ~~~~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 83 (103)
T 1wfv_A 19 KGAKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKS 83 (103)
T ss_dssp CCTTSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred cCCCcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 44567999998654444467899999999999999 99999999999999999999999999883
No 148
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.98 E-value=3.1e-09 Score=83.24 Aligned_cols=81 Identities=23% Similarity=0.268 Sum_probs=62.6
Q ss_pred ccEEEEeeCCCCCccceEEEecCCC----CcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH------HHHhhc
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWG----SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA------YMEFLK 272 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g----~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~------~~~~~~ 272 (359)
..++|.|.|..+.+|||++.++... ....+++|..|.++|||+ +| |++||+|++|||.++.+ ......
T Consensus 7 ~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 84 (107)
T 2h2b_A 7 EQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQLRK 84 (107)
T ss_dssp EEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred eeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHHhhC
Confidence 3567999998777999999864211 113478999999999999 89 99999999999999876 222234
Q ss_pred CCCeEEEEEEeCc
Q psy5022 273 ANGIEDHSFVKEM 285 (359)
Q Consensus 273 ~~~~v~l~v~~~~ 285 (359)
.+..+.|.+.|+.
T Consensus 85 ~g~~v~l~v~R~~ 97 (107)
T 2h2b_A 85 SGKNAKITIRRKK 97 (107)
T ss_dssp CCSEEEEEEEEES
T ss_pred CCCEEEEEEEECC
Confidence 5678899988753
No 149
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.98 E-value=1e-09 Score=87.64 Aligned_cols=62 Identities=19% Similarity=0.281 Sum_probs=54.0
Q ss_pred ccccCcEEeccccccc-CcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 294 QEIFGDELQMFAKKEL-QKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~~-~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
..+|||.+........ +.+|.+|.++|||+++| |++||+|++|||+++.++++++++++|++
T Consensus 26 ~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~ 89 (117)
T 1v62_A 26 GSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLAS 89 (117)
T ss_dssp TCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHS
T ss_pred CCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3689999986543222 37999999999999988 99999999999999999999999999985
No 150
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.98 E-value=1.2e-09 Score=85.48 Aligned_cols=61 Identities=25% Similarity=0.308 Sum_probs=53.3
Q ss_pred ccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 294 QEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
...|||.+.... ...+.+|..|.++|||+++||++||+|++|||+++.++++++++.+++.
T Consensus 12 ~~~~G~~l~~~~-~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~ 72 (106)
T 3ngh_A 12 GQNYGFFLRIEK-DTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRK 72 (106)
T ss_dssp TCCCCCEEECCT-TCCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred CCeeCEEEEEEe-CCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 467899987543 2336799999999999999999999999999999999999999999984
No 151
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.98 E-value=3.8e-09 Score=81.84 Aligned_cols=83 Identities=23% Similarity=0.298 Sum_probs=63.6
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCC---cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGS---MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK- 272 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~---~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~- 272 (359)
...++|.|.|.. .+|||++.++.... ...+++|..|.++|||+++|+|++||+|++|||.++.+ ++..++
T Consensus 6 ~~~~~v~l~~~~-~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 84 (101)
T 2jik_A 6 VTEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN 84 (101)
T ss_dssp EEEEEEEEECCT-TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHT
T ss_pred CccEEEEEEeCC-CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 456789999986 69999998642110 13578999999999999999999999999999999865 333333
Q ss_pred CCCeEEEEEEeCc
Q psy5022 273 ANGIEDHSFVKEM 285 (359)
Q Consensus 273 ~~~~v~l~v~~~~ 285 (359)
.+..+.|+|.|..
T Consensus 85 ~g~~v~l~v~R~~ 97 (101)
T 2jik_A 85 AGYAVSLRVQHRL 97 (101)
T ss_dssp CCSEEEEEEEEES
T ss_pred CCCeEEEEEEeCC
Confidence 3567888887653
No 152
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.98 E-value=1.5e-09 Score=85.08 Aligned_cols=75 Identities=24% Similarity=0.252 Sum_probs=59.5
Q ss_pred EEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCCCeEE
Q psy5022 205 KEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KANGIED 278 (359)
Q Consensus 205 ~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~~v~ 278 (359)
.+|.|.|..+.+||+.+... ..+++|..|.++|||+++|+|++||+|++|||+++.+ ....+ ..++.+.
T Consensus 4 ~~v~L~k~~~~glG~~i~~~-----~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~ 78 (106)
T 2la8_A 4 FNVDLMKKAGKELGLSLSPN-----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVS 78 (106)
T ss_dssp EEEEECCBSSSTTCCEEEEC-----SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEE
T ss_pred EEEEEEeCCCCccCEEEEeC-----CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Confidence 46888877778999998752 2468999999999999999999999999999999865 22222 2345788
Q ss_pred EEEEeC
Q psy5022 279 HSFVKE 284 (359)
Q Consensus 279 l~v~~~ 284 (359)
|.+.|.
T Consensus 79 l~v~R~ 84 (106)
T 2la8_A 79 MEVTRP 84 (106)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 988875
No 153
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.97 E-value=1.1e-09 Score=83.33 Aligned_cols=57 Identities=67% Similarity=0.989 Sum_probs=50.8
Q ss_pred cccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 293 SQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
....|||.+.. + +|.+|.++|||+++||++||+|++|||+++.+.++++++++|+.+
T Consensus 22 ~~~~lG~~~~~------G-~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 78 (90)
T 1y7n_A 22 LRYQLGFSVQN------G-IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNA 78 (90)
T ss_dssp TTSCCCEEEET------T-EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHHC
T ss_pred CccccCeEecC------C-EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 45678998853 3 899999999999999999999999999999999999999999854
No 154
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.97 E-value=1.4e-09 Score=86.85 Aligned_cols=83 Identities=29% Similarity=0.309 Sum_probs=63.4
Q ss_pred cccEEEEeeCCCCCccceEEEecCC-CCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CC
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGW-GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-AN 274 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~-g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~ 274 (359)
..+++|.|.|.. .+|||++.++.. .....+++|..|.++|||+++|+|++||+|++|||.++.+ ++..++ .+
T Consensus 24 ~~~~~v~L~k~~-~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 102 (117)
T 2fne_A 24 PQCKSITLERGP-DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTK 102 (117)
T ss_dssp CEEEEEEECCBT-TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CccEEEEEEeCC-CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 456789999986 589999985310 0012468999999999999999999999999999999884 333332 34
Q ss_pred CeEEEEEEeCc
Q psy5022 275 GIEDHSFVKEM 285 (359)
Q Consensus 275 ~~v~l~v~~~~ 285 (359)
+.++|+|.|..
T Consensus 103 ~~v~l~v~R~g 113 (117)
T 2fne_A 103 GTVTLMVLSSD 113 (117)
T ss_dssp SSEEEEEEECS
T ss_pred CeEEEEEEeCC
Confidence 56999988764
No 155
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.97 E-value=3.2e-09 Score=79.54 Aligned_cols=75 Identities=20% Similarity=0.272 Sum_probs=57.8
Q ss_pred EEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH--------HHHhhcCCCeE
Q psy5022 206 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--------YMEFLKANGIE 277 (359)
Q Consensus 206 ~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--------~~~~~~~~~~v 277 (359)
++.+.|.. .+|||.+.++.. ...+++|..|.++|||+++|+|++||+|++|||.++.+ +++....+..+
T Consensus 3 ~v~l~k~~-~g~G~~i~~~~~--~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v 79 (85)
T 2i04_A 3 HTKLRKSS-RGFGFTVVGGDE--PDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASV 79 (85)
T ss_dssp EEEEECBT-TBSSEEEEECCS--TTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEE
T ss_pred EEEEEECC-CCCCEEEEcccC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeE
Confidence 57788875 589999985321 23468999999999999999999999999999999863 33333336678
Q ss_pred EEEEEe
Q psy5022 278 DHSFVK 283 (359)
Q Consensus 278 ~l~v~~ 283 (359)
.|++.|
T Consensus 80 ~l~v~R 85 (85)
T 2i04_A 80 DLELCR 85 (85)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 887753
No 156
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.97 E-value=1.8e-09 Score=84.89 Aligned_cols=82 Identities=29% Similarity=0.328 Sum_probs=62.4
Q ss_pred cccEEEEeeCCCCCccceEEEecCC--CCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhcC-
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGW--GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLKA- 273 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~--g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~~- 273 (359)
...++|.|.|.. .+|||+|.++.. .....+++|..|.++|||+++|+|++||+|++|||+++.+ ++..++.
T Consensus 14 ~~~~~v~l~k~~-~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 92 (108)
T 2d92_A 14 PEVKIVELVKDC-KGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAV 92 (108)
T ss_dssp SSCEEEEEEECS-SCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHS
T ss_pred CceEEEEEEECC-CccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 345789999985 599999986321 1123468999999999999999999999999999999865 3333332
Q ss_pred -CCeEEEEEEeC
Q psy5022 274 -NGIEDHSFVKE 284 (359)
Q Consensus 274 -~~~v~l~v~~~ 284 (359)
++.++|+|.|.
T Consensus 93 ~~~~v~l~v~R~ 104 (108)
T 2d92_A 93 PPGLVHLGICSG 104 (108)
T ss_dssp CSEEEEEEEECC
T ss_pred CCCeEEEEEEcC
Confidence 34788888775
No 157
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.97 E-value=1.6e-09 Score=86.56 Aligned_cols=84 Identities=20% Similarity=0.305 Sum_probs=65.7
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCC
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANG 275 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~ 275 (359)
...+.|.|.|..+++|||.+..+. +....+++|..|.++|||+++|+|++||+|++|||.++.+ +...++ .+.
T Consensus 14 ~~~~~v~l~k~~~~~lG~~i~~~~-~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~ 92 (117)
T 1v62_A 14 SGPLMVEIVKTPGSALGISLTTTS-LRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISE 92 (117)
T ss_dssp SSSEEEEEECCTTCCCCCEEEEEC-CSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSS
T ss_pred CCcEEEEEEcCCCCcccEEEEccC-CCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 456789999998789999998542 1112358999999999999999999999999999999944 333332 567
Q ss_pred eEEEEEEeCcc
Q psy5022 276 IEDHSFVKEMD 286 (359)
Q Consensus 276 ~v~l~v~~~~~ 286 (359)
.++|.|.|...
T Consensus 93 ~v~l~v~r~~~ 103 (117)
T 1v62_A 93 KVRLEILPVPQ 103 (117)
T ss_dssp EEEEEECCBTT
T ss_pred eEEEEEEECCC
Confidence 89999887643
No 158
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.97 E-value=1.3e-09 Score=84.92 Aligned_cols=65 Identities=22% Similarity=0.242 Sum_probs=55.6
Q ss_pred eccccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 291 LNSQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
.+...+|||.+.++.. ..+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 18 ~k~~~glG~~~~~~~~-~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 83 (104)
T 3i4w_A 18 HRGSTGLGFNIVGGEX-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA 83 (104)
T ss_dssp ECBTTBTSEEEEECC--CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred EeCCCccCEEEECCCC-CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3456689999986533 2378999999999999999 999999999999999999999999988863
No 159
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.97 E-value=7e-10 Score=90.49 Aligned_cols=78 Identities=22% Similarity=0.259 Sum_probs=59.9
Q ss_pred EEeeCCCCCccceEEEecC-CCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH--------HHHhhcCCCeE
Q psy5022 207 VVVPKAKGEILGVVIVESG-WGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--------YMEFLKANGIE 277 (359)
Q Consensus 207 v~l~r~~~~~lG~~i~~~~-~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--------~~~~~~~~~~v 277 (359)
+.+.|+.+++|||.+.++. ......+++|..|.++|||+++|+|++||+|++|||+++.+ +++..+.+..+
T Consensus 40 ~~i~k~~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v 119 (131)
T 1wfg_A 40 GSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQV 119 (131)
T ss_dssp SCCCSCSCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEE
T ss_pred EEEecCCCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEE
Confidence 3444556789999998532 11113478999999999999999999999999999999864 44554556789
Q ss_pred EEEEEeC
Q psy5022 278 DHSFVKE 284 (359)
Q Consensus 278 ~l~v~~~ 284 (359)
+|+|.|.
T Consensus 120 ~l~v~R~ 126 (131)
T 1wfg_A 120 ELVVSRS 126 (131)
T ss_dssp EEEEEEE
T ss_pred EEEEEcC
Confidence 9998875
No 160
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.97 E-value=1.9e-09 Score=82.35 Aligned_cols=59 Identities=31% Similarity=0.438 Sum_probs=52.3
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLA 354 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~ 354 (359)
+...+|||.+.. ..+.+|..|.++|||+++||++||+|++|||+++.++++.+++..++
T Consensus 16 ~~~~~~G~~l~~----~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~ 74 (93)
T 2dls_A 16 KDQHGFGFTVSG----DRIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIK 74 (93)
T ss_dssp CSSSSCCEEEEC----SSSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHHHT
T ss_pred eCCCceeEEEeC----CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhc
Confidence 455678999874 24789999999999999999999999999999999999999888887
No 161
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.96 E-value=3.3e-09 Score=82.55 Aligned_cols=79 Identities=27% Similarity=0.289 Sum_probs=62.4
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCCC
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KANG 275 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~ 275 (359)
...+++.|.|.. .+|||.+.++.. ..+++|..|.++|||+++|+|++||+|++|||.++.+ ....+ ..+.
T Consensus 10 ~~~~~v~l~k~~-~glG~~~~~~~~---~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 85 (104)
T 3i4w_A 10 REPRRIVIHRGS-TGLGFNIVGGEX---GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQ 85 (104)
T ss_dssp SSCEEEEEECBT-TBTSEEEEECC----CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCS
T ss_pred CccEEEEEEeCC-CccCEEEECCCC---CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 456789999984 589999986422 3478999999999999999999999999999999855 22222 3566
Q ss_pred eEEEEEEeC
Q psy5022 276 IEDHSFVKE 284 (359)
Q Consensus 276 ~v~l~v~~~ 284 (359)
.++|++.+.
T Consensus 86 ~v~l~v~r~ 94 (104)
T 3i4w_A 86 TVTIIAQYK 94 (104)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEEC
Confidence 788988875
No 162
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.96 E-value=4.6e-09 Score=80.53 Aligned_cols=82 Identities=27% Similarity=0.338 Sum_probs=62.7
Q ss_pred cccEEEEeeCCCCCccceEEEecC-CCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CC
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESG-WGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-AN 274 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~-~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~ 274 (359)
...+++.|.|.. .+|||++.++. ......+++|..|.++|||+++|+|++||+|++|||.++.+ +...++ .+
T Consensus 4 g~~~~v~l~k~~-~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 82 (96)
T 1d5g_A 4 GDIFEVELAKND-NSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG 82 (96)
T ss_dssp TCEEEEEEECSS-SSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCC
T ss_pred CCEEEEEEEeCC-CCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 345678898875 69999998532 11123578999999999999999999999999999999874 333333 45
Q ss_pred CeEEEEEEeC
Q psy5022 275 GIEDHSFVKE 284 (359)
Q Consensus 275 ~~v~l~v~~~ 284 (359)
..+.|.+.|+
T Consensus 83 ~~v~l~v~R~ 92 (96)
T 1d5g_A 83 QVVHLLLEKG 92 (96)
T ss_dssp SEEEEEEECC
T ss_pred CeEEEEEEcC
Confidence 6788888765
No 163
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.96 E-value=9.4e-10 Score=86.32 Aligned_cols=64 Identities=20% Similarity=0.337 Sum_probs=54.9
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
+...++||.+.. ...+.+|.+|.++|||+++| |++||+|++|||+++.++++.+++.+++...+
T Consensus 11 ~~~~glG~~i~~---~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~ 75 (106)
T 2la8_A 11 KAGKELGLSLSP---NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANG 75 (106)
T ss_dssp BSSSTTCCEEEE---CSSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBS
T ss_pred CCCCccCEEEEe---CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCC
Confidence 455678998875 23478999999999999998 99999999999999999999999998886543
No 164
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.96 E-value=1.5e-09 Score=82.53 Aligned_cols=61 Identities=21% Similarity=0.220 Sum_probs=52.9
Q ss_pred cccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 295 EIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 295 ~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
.+|||.+.++.. ..+.+|..|.++|||+++||++||+|++|||+++.++++.+++.+++..
T Consensus 19 ~~~G~~~~~~~~-~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 79 (91)
T 1m5z_A 19 EDFGFSVADGLL-EKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAES 79 (91)
T ss_dssp SSSSEEEEECTT-SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred CCccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 478999986432 2477899999999999999999999999999999999999988888753
No 165
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.96 E-value=1e-09 Score=88.53 Aligned_cols=66 Identities=21% Similarity=0.340 Sum_probs=56.6
Q ss_pred ccccccCcEEeccccc-ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 292 NSQEIFGDELQMFAKK-ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~-~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
+...+|||.+.++... ..+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+++.+.
T Consensus 33 k~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~ 100 (124)
T 2daz_A 33 KDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAP 100 (124)
T ss_dssp CCSSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSC
T ss_pred eCCCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4456899999875433 3477999999999999988 9999999999999999999999999998653
No 166
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.95 E-value=2e-09 Score=85.01 Aligned_cols=62 Identities=21% Similarity=0.244 Sum_probs=52.4
Q ss_pred eccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 291 LNSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
.+...+|||++.+.. .+.+|.+|.+ +|+.+||++||+|++|||+++.+++|++++++|++++
T Consensus 19 ~Kg~~G~GFsI~~~~---~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~ 80 (113)
T 3soe_A 19 IKGPKGFGFAIADSP---TGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFP 80 (113)
T ss_dssp ECBTTBSSEEEEEET---TEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSC
T ss_pred EECCCcccEEEeCCC---CCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 456779999996432 2457888887 5778999999999999999999999999999999864
No 167
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.95 E-value=5.2e-09 Score=80.38 Aligned_cols=79 Identities=24% Similarity=0.344 Sum_probs=60.7
Q ss_pred EEEEeeCCCCCccceEEEecCC----CCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHH-hhcCC
Q psy5022 205 KEVVVPKAKGEILGVVIVESGW----GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YME-FLKAN 274 (359)
Q Consensus 205 ~~v~l~r~~~~~lG~~i~~~~~----g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~-~~~~~ 274 (359)
..+.+.+.. .+|||++.++.. .....+++|..|.++|||+++| |++||+|++|||.++.+ .+. ....+
T Consensus 5 ~~v~~~~~~-~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g 82 (97)
T 2w4f_A 5 LTLTILRQT-GGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGAG 82 (97)
T ss_dssp EEEEEECBT-TBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred EEEEEEeCC-CceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCCC
Confidence 357777874 599999985421 1123578999999999999999 99999999999999877 222 22367
Q ss_pred CeEEEEEEeCc
Q psy5022 275 GIEDHSFVKEM 285 (359)
Q Consensus 275 ~~v~l~v~~~~ 285 (359)
..++|.+.|+.
T Consensus 83 ~~v~l~v~R~g 93 (97)
T 2w4f_A 83 TAVQMRVWRER 93 (97)
T ss_dssp SEEEEEEECCS
T ss_pred CeEEEEEEeCC
Confidence 78999998764
No 168
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.95 E-value=2.3e-09 Score=83.57 Aligned_cols=80 Identities=31% Similarity=0.474 Sum_probs=61.4
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhc-CCCCCCCEEEEECCccHHH-----HHHhhc-CC
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARC-GQLNIGDQIIAVNGVSLVA-----YMEFLK-AN 274 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~-G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~ 274 (359)
...++|.+.|..+++|||++.++. . ...+++|..|.++|||+++ | |++||+|++|||.++.+ ++..++ .+
T Consensus 8 ~~~~~v~l~~~~~~~lG~~l~~g~-~-~~~~~~V~~V~~~s~A~~a~g-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~ 84 (103)
T 2dc2_A 8 GPIRKVLLLKEDHEGLGISITGGK-E-HGVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQR 84 (103)
T ss_dssp -CEEEEEEECCSSSCCCEEEEEEG-G-GTEEEEEEEECTTSHHHHHTC-CCSSEEEEEETTEESTTSCHHHHHHHHHHCC
T ss_pred CCcEEEEEEeCCCCccCEEEEecc-C-CCCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 456789999988889999998532 1 1236799999999999996 7 99999999999999865 333332 34
Q ss_pred CeEEEEEEeC
Q psy5022 275 GIEDHSFVKE 284 (359)
Q Consensus 275 ~~v~l~v~~~ 284 (359)
+.++|++.+.
T Consensus 85 ~~v~l~v~~~ 94 (103)
T 2dc2_A 85 GEIEFEVVYV 94 (103)
T ss_dssp SEEEEEEEEC
T ss_pred CcEEEEEEec
Confidence 5788988864
No 169
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.95 E-value=1.6e-09 Score=86.47 Aligned_cols=63 Identities=14% Similarity=0.172 Sum_probs=55.3
Q ss_pred ccccCcEEeccccc---------ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 294 QEIFGDELQMFAKK---------ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 294 ~~~~G~~~~~~~~~---------~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
..+|||.+.++... ..+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 26 ~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 98 (117)
T 2ehr_A 26 NVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKNA 98 (117)
T ss_dssp SSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHHTS
T ss_pred CCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 47899999876432 2467999999999999999 999999999999999999999999999864
No 170
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.95 E-value=1.4e-09 Score=84.49 Aligned_cols=64 Identities=20% Similarity=0.325 Sum_probs=55.2
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.... ...+.+|..|.++|||+++||++||+|++|||+++.+++++++.++|++.
T Consensus 14 k~~~g~G~~l~~~~-~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 77 (102)
T 2d90_A 14 KGSNGYGFYLRAGP-EQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKG 77 (102)
T ss_dssp CCSSSSSCEEEECS-SSSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHHS
T ss_pred eCCCCccEEEEeec-CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 45568999998632 23468999999999999999999999999999999999999999999863
No 171
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.95 E-value=2.9e-09 Score=80.13 Aligned_cols=76 Identities=32% Similarity=0.462 Sum_probs=58.1
Q ss_pred cEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhh-cCCCCCCCEEEEECCccHHH-----HHHhh-cCCCe
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAAR-CGQLNIGDQIIAVNGVSLVA-----YMEFL-KANGI 276 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~-~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~~ 276 (359)
.+++.|.|..+++|||++.++.. ...+++|..|.++|||++ +| |++||+|++|||.++.+ ....+ ..++.
T Consensus 3 ~~~v~l~~~~~~~lG~~i~~~~~--~~~~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 79 (87)
T 4e34_A 3 IRKVLLLKEDHEGLGISITGGKE--HGVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE 79 (87)
T ss_dssp CEEEEEECCTTBCCCEEEEEEGG--GTEEEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTTCCHHHHHHHHHHCCSE
T ss_pred EEEEEEEECCCCcccEEEEccCC--CCCCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 46789999888899999985421 123589999999999999 58 99999999999999865 22222 24556
Q ss_pred EEEEEE
Q psy5022 277 EDHSFV 282 (359)
Q Consensus 277 v~l~v~ 282 (359)
++|++.
T Consensus 80 v~l~v~ 85 (87)
T 4e34_A 80 IEFEVV 85 (87)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777764
No 172
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.95 E-value=1.9e-09 Score=86.98 Aligned_cols=62 Identities=19% Similarity=0.273 Sum_probs=54.1
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
+....|||.+.++. ..+.+|..|.++|||+++||++||+|++|||+++.++++++++.+|++
T Consensus 36 ~~~~~lG~~l~~~~--~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 97 (124)
T 3tsv_A 36 RKGDSVGLRLAGGN--DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLD 97 (124)
T ss_dssp ECSSCCCEEEEECT--TSCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred CCCCceeEEEecCC--CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 34568899987532 247899999999999999999999999999999999999999998875
No 173
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.95 E-value=1.2e-09 Score=85.74 Aligned_cols=65 Identities=23% Similarity=0.412 Sum_probs=55.5
Q ss_pred ccccccCcEEecc---cc---cccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMF---AK---KELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~---~~---~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.+. .. ...+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+++.+
T Consensus 17 k~~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 88 (107)
T 1wf8_A 17 KDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNT 88 (107)
T ss_dssp CBTTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHC
T ss_pred ECCCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 4567899999872 21 23467999999999999999 999999999999999999999999999864
No 174
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.95 E-value=1.1e-09 Score=86.71 Aligned_cols=65 Identities=23% Similarity=0.351 Sum_probs=55.5
Q ss_pred ccccccCcEEec---ccc---cccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQM---FAK---KELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~---~~~---~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.+ +.. ...+.+|.+|.++|||+++| |++||+|++|||+++.++++.+++.+++.+
T Consensus 12 k~~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 83 (113)
T 2g5m_B 12 KDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT 83 (113)
T ss_dssp CCSSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHS
T ss_pred eCCCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 455789999986 221 23467999999999999999 999999999999999999999999999875
No 175
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.95 E-value=2.3e-09 Score=86.97 Aligned_cols=62 Identities=31% Similarity=0.426 Sum_probs=53.8
Q ss_pred cccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 295 EIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 295 ~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
..|||.+........+.+|..|.++|||+++||++||+|++|||+++.++++.++++.++..
T Consensus 32 ~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 93 (128)
T 1uf1_A 32 RSLGLTIRGGAEYGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKSS 93 (128)
T ss_dssp CCCCEEEECCTTTTCCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHTTC
T ss_pred CccCEEEECcccCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 56899988654334478999999999999999999999999999999999998999888753
No 176
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.94 E-value=9.3e-10 Score=83.69 Aligned_cols=78 Identities=22% Similarity=0.240 Sum_probs=59.1
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHH--H---HHHhhcC-CCe
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV--A---YMEFLKA-NGI 276 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~--~---~~~~~~~-~~~ 276 (359)
..+.+.|.|..+ +|||.+.... ...+++|..|.++|||+++| |++||+|++|||.++. + +...+.. +..
T Consensus 3 ~pr~v~l~k~~~-~~G~~l~~~~---~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 77 (91)
T 2vsp_A 3 KPKLCRLAKGEN-GYGFHLNAIR---GLPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKN 77 (91)
T ss_dssp CEEEEEEECBTT-BTSCCCBCCT---TCSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSCSE
T ss_pred CcEEEEEEeCCC-cccEEEEecc---CCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 457899999865 8999987421 22467899999999999999 9999999999999987 3 3333332 678
Q ss_pred EEEEEEeCc
Q psy5022 277 EDHSFVKEM 285 (359)
Q Consensus 277 v~l~v~~~~ 285 (359)
++|++.|..
T Consensus 78 v~l~v~r~~ 86 (91)
T 2vsp_A 78 VTLLVCGKK 86 (91)
T ss_dssp EEEEEEC--
T ss_pred EEEEEEeCC
Confidence 999988753
No 177
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.48 E-value=8.3e-11 Score=93.33 Aligned_cols=65 Identities=23% Similarity=0.359 Sum_probs=56.5
Q ss_pred cccccCcEEecccccccCcEEEEEcCCChhhc-CCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 293 SQEIFGDELQMFAKKELQKEICSLLRGGIAER-GGVRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~-~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
...+|||.+.++.....+.+|.+|.++|||++ +||++||+|++|||+++.+.++++++.+|+.+.
T Consensus 37 ~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~~ 102 (112)
T 2lob_A 37 DHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQR 102 (112)
Confidence 44689999987654445679999999999999 999999999999999999999999999998654
No 178
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.94 E-value=2.7e-09 Score=80.56 Aligned_cols=62 Identities=19% Similarity=0.322 Sum_probs=49.7
Q ss_pred eccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 291 LNSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
.+...+|||.+..... ..+.+|..+ ++|||+ +||++||+|++|||+++.++++++++++|++
T Consensus 10 ~k~~~g~G~~~~~~~~-~~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~ 71 (88)
T 3bpu_A 10 VKGPMGFGFTIADSPG-GGGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVE 71 (88)
T ss_dssp ECBTTBSSCEEEECTT-SSSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHT
T ss_pred EcCCCceeEEEEecCC-CCcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHh
Confidence 3556789999985322 235677776 999999 9999999999999999999999999999985
No 179
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.94 E-value=1.5e-09 Score=83.53 Aligned_cols=62 Identities=19% Similarity=0.304 Sum_probs=53.5
Q ss_pred cccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 293 SQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
...++||.+.. ...+.+|.+|.++|||+++| |++||+|++|||+++.++++.+++.+++...
T Consensus 18 ~~~glG~~~~~---~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~ 80 (96)
T 2qkv_A 18 AGKELGLSLSP---NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGAN 80 (96)
T ss_dssp TTBCCCEEEEE---CSSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCS
T ss_pred CCCCccEEEEe---CCCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 45678988765 23478999999999999999 9999999999999999999999998888653
No 180
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=2.1e-09 Score=81.80 Aligned_cols=60 Identities=27% Similarity=0.441 Sum_probs=52.5
Q ss_pred cccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 293 SQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
....|||.+.. ...+.+|.+|.++|||+++| |++||+|++|||+++ +.+++++.++|+.+
T Consensus 16 ~~~~lG~~i~~---~~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~ 76 (91)
T 2e7k_A 16 AGEHLGVTFRV---EGGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNA 76 (91)
T ss_dssp TTCCCCEEEEE---SSSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTC
T ss_pred CCCcEeEEEEe---cCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcC
Confidence 45689999985 23478999999999999965 999999999999999 88999999999874
No 181
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.94 E-value=2.2e-09 Score=83.31 Aligned_cols=63 Identities=30% Similarity=0.386 Sum_probs=52.9
Q ss_pred ccccCcEEeccccc--ccCcEEEEEcCCChhhc-CCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 294 QEIFGDELQMFAKK--ELQKEICSLLRGGIAER-GGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 294 ~~~~G~~~~~~~~~--~~~~~I~~v~~gs~A~~-~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
..+|||.+...... ..+.+|.+|.++|||++ ++|++||+|++|||+++.+.++++++++|+..
T Consensus 20 g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~ 85 (101)
T 2yt7_A 20 GEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRET 85 (101)
T ss_dssp TCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHT
T ss_pred CCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 36899999742111 12479999999999999 77999999999999999999999999999975
No 182
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.94 E-value=1.5e-09 Score=88.15 Aligned_cols=64 Identities=19% Similarity=0.317 Sum_probs=54.9
Q ss_pred ccccCcEEecccc---------cccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 294 QEIFGDELQMFAK---------KELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 294 ~~~~G~~~~~~~~---------~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
..+|||.+.++.. ...+.+|..|.++|||+++| |++||+|++|||+++.++++++++.+|+.+.
T Consensus 41 ~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~ 114 (128)
T 1nf3_C 41 EKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANS 114 (128)
T ss_dssp TSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHHHTT
T ss_pred CCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4689999986542 12357899999999999999 9999999999999999999999999998643
No 183
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=1.5e-09 Score=82.59 Aligned_cols=78 Identities=31% Similarity=0.381 Sum_probs=61.0
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccH-HH---HHHhhc-CCCe
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL-VA---YMEFLK-ANGI 276 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v-~~---~~~~~~-~~~~ 276 (359)
...+.|.|.|..+.+||+++... ..+++|..|.++|||+++|.|++||+|++|||.++ .+ +...++ .++.
T Consensus 5 ~~~r~v~l~k~~~~~lG~~i~~~-----~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~~~~~l~~~~~~ 79 (91)
T 2e7k_A 5 SSGRMVGIRKTAGEHLGVTFRVE-----GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRALQELLRNASGS 79 (91)
T ss_dssp CCSCBCCBCCCTTCCCCEEEEES-----SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHHHHHHHHTCCSS
T ss_pred CCcEEEEEEECCCCcEeEEEEec-----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHHHHHHHHcCCCe
Confidence 45667888887778999999852 34789999999999999877999999999999999 33 333332 3556
Q ss_pred EEEEEEeC
Q psy5022 277 EDHSFVKE 284 (359)
Q Consensus 277 v~l~v~~~ 284 (359)
++|++.+.
T Consensus 80 v~l~v~~~ 87 (91)
T 2e7k_A 80 VILKILSG 87 (91)
T ss_dssp BCEEEECC
T ss_pred EEEEEEEC
Confidence 88888764
No 184
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.94 E-value=1.6e-09 Score=92.30 Aligned_cols=65 Identities=23% Similarity=0.351 Sum_probs=55.3
Q ss_pred ccccccCcEEec---ccc---cccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQM---FAK---KELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~---~~~---~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.+ +.. ...+.+|..|.+||||+++| |++||+|++|||+++.+++|.+++.+|+.+
T Consensus 88 k~~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~ 159 (170)
T 3egg_C 88 KDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT 159 (170)
T ss_dssp CBTTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHHC
T ss_pred eCCCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 344689999987 211 12457999999999999988 999999999999999999999999999974
No 185
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.94 E-value=2.9e-09 Score=81.82 Aligned_cols=77 Identities=23% Similarity=0.234 Sum_probs=60.0
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCCCe
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KANGI 276 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~~ 276 (359)
...++.+.+..+.+||+.+... ..+++|..|.++|||+++|+|++||+|++|||+++.+ ....+ ..++.
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~~-----~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~ 82 (96)
T 2qkv_A 8 EKFNVDLMKKAGKELGLSLSPN-----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGK 82 (96)
T ss_dssp CCEEEEEECBTTBCCCEEEEEC-----SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSE
T ss_pred ceEEEEEEeCCCCCccEEEEeC-----CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCc
Confidence 3456888776677899998752 2468999999999999999999999999999999865 22222 34567
Q ss_pred EEEEEEeC
Q psy5022 277 EDHSFVKE 284 (359)
Q Consensus 277 v~l~v~~~ 284 (359)
++|.+.|.
T Consensus 83 v~l~v~R~ 90 (96)
T 2qkv_A 83 VSMEVTRP 90 (96)
T ss_dssp EEEEEECC
T ss_pred EEEEEEeC
Confidence 89988875
No 186
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.94 E-value=2.4e-09 Score=84.35 Aligned_cols=64 Identities=23% Similarity=0.300 Sum_probs=54.9
Q ss_pred ccccccCcEEecccc------cccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 292 NSQEIFGDELQMFAK------KELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~------~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
+...+|||.+.++.. ...+.+|..|.++|||+++||++||+|++|||+++.++++.+++..++.
T Consensus 23 ~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~ 92 (110)
T 1x5q_A 23 RQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRG 92 (110)
T ss_dssp CSSSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHS
T ss_pred cCCCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhhC
Confidence 456789999986532 2346789999999999999999999999999999999999998888875
No 187
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.94 E-value=2.9e-09 Score=83.25 Aligned_cols=78 Identities=19% Similarity=0.265 Sum_probs=62.0
Q ss_pred cEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCCCeE
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KANGIE 277 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~~v 277 (359)
.+.+.|.|..++.+||.+.... ...+++|..|.++|||+++| |++||+|++|||.++.+ +...+ ..+..+
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~~~---~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 77 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRIEK---DTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSV 77 (106)
T ss_dssp CEEEEEECCTTCCCCCEEECCT---TCCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEE
T ss_pred CEEEEEEeCCCCeeCEEEEEEe---CCCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEE
Confidence 4578899998889999997432 23467899999999999999 99999999999999866 22222 356789
Q ss_pred EEEEEeCc
Q psy5022 278 DHSFVKEM 285 (359)
Q Consensus 278 ~l~v~~~~ 285 (359)
+|++.|..
T Consensus 78 ~l~v~r~~ 85 (106)
T 3ngh_A 78 TLLVLDGD 85 (106)
T ss_dssp EEEEECHH
T ss_pred EEEEEECC
Confidence 99988754
No 188
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.94 E-value=2e-09 Score=83.40 Aligned_cols=62 Identities=24% Similarity=0.315 Sum_probs=54.1
Q ss_pred ccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 294 QEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
...|||.+........+.+|..|.++|||+++||++||+|++|||+++.++++.+++..++.
T Consensus 21 ~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~ 82 (100)
T 2eeh_A 21 AGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTS 82 (100)
T ss_dssp SSSCSEEEECCTTTTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHS
T ss_pred CCCccEEEEccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcC
Confidence 34589999865443457899999999999999999999999999999999999999998875
No 189
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.94 E-value=2.4e-09 Score=86.06 Aligned_cols=65 Identities=25% Similarity=0.390 Sum_probs=55.8
Q ss_pred ccccccCcEEeccccc---ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKK---ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~---~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+...... ..+.+|.+|.++|||+++| |++||+|++|||+++.++++++++++|+..
T Consensus 38 ~~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 106 (121)
T 2kom_A 38 KGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRST 106 (121)
T ss_dssp CCTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHC
T ss_pred cCCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Confidence 4556789999865322 2467999999999999999 999999999999999999999999999875
No 190
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.93 E-value=2.2e-09 Score=86.35 Aligned_cols=64 Identities=27% Similarity=0.270 Sum_probs=55.7
Q ss_pred ccccCcEEeccc----ccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 294 QEIFGDELQMFA----KKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 294 ~~~~G~~~~~~~----~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
..+|||.+.+.. ....+.+|.+|.++|||+++| |++||+|++|||+++.+++++++.++|+...
T Consensus 26 ~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 94 (122)
T 1v5q_A 26 VTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSS 94 (122)
T ss_dssp SSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHT
T ss_pred CCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 478999998642 123467999999999999999 9999999999999999999999999999765
No 191
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.93 E-value=1e-09 Score=85.97 Aligned_cols=65 Identities=23% Similarity=0.372 Sum_probs=55.8
Q ss_pred eccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 291 LNSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
.+...+|||.+.... ...+.+|..|.++|||+++||++||+|++|||+++.++++.+++.+++.+
T Consensus 15 ~k~~~~~G~~l~~~~-~~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 79 (106)
T 2eei_A 15 VKEGGSYGFSLKTVQ-GKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKS 79 (106)
T ss_dssp ECCSSSCSCCEECCS-SCCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHH
T ss_pred EECCCCCCEEEEecc-CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 355678999997542 23478999999999999999999999999999999999999999998754
No 192
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.93 E-value=2e-09 Score=83.75 Aligned_cols=63 Identities=19% Similarity=0.229 Sum_probs=52.5
Q ss_pred cccCcEEeccccc---------ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 295 EIFGDELQMFAKK---------ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 295 ~~~G~~~~~~~~~---------~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
..|||.+.+.... ..+.+|.+|.++|||+++| |++||+|++|||+++.+++++++.++|+.+.
T Consensus 16 ~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 88 (103)
T 2fcf_A 16 KSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAG 88 (103)
T ss_dssp CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred CceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 5688888764321 1367899999999999999 9999999999999999999999999998763
No 193
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.93 E-value=1.9e-09 Score=84.99 Aligned_cols=65 Identities=25% Similarity=0.300 Sum_probs=55.6
Q ss_pred ccccccCcEEeccccc---ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKK---ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~---~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.++... ..+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+++.+
T Consensus 16 ~~~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 84 (110)
T 1um1_A 16 RGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHG 84 (110)
T ss_dssp CCTTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTC
T ss_pred ECCCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3446899999865432 3467899999999999999 999999999999999999999999999864
No 194
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.93 E-value=5.9e-09 Score=82.82 Aligned_cols=84 Identities=21% Similarity=0.302 Sum_probs=62.7
Q ss_pred hcccccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-
Q psy5022 199 AKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK- 272 (359)
Q Consensus 199 ~~~~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~- 272 (359)
.....+++|.+.|...+.|||.+.++.. ..++++|..|.++|||+++|+|++||+|++|||.++.+ +...++
T Consensus 20 ~q~~~~~~V~l~~~~~~~lG~~l~~~~~--~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~ 97 (114)
T 2gzv_A 20 FQSMVPGKVTLQKDAQNLIGISIGGGAQ--YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQE 97 (114)
T ss_dssp --CCCCEEEEEECCTTSCCSEEEEECCC----CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred eccCCCEEEEEEECCCCcEeEEEEeCCC--CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3445678899999987789999985421 12478999999999999999999999999999999833 333332
Q ss_pred CCCeEEEEEEeC
Q psy5022 273 ANGIEDHSFVKE 284 (359)
Q Consensus 273 ~~~~v~l~v~~~ 284 (359)
.++.++|++.+.
T Consensus 98 ~~~~v~l~v~~~ 109 (114)
T 2gzv_A 98 VKGEVTIHYNKL 109 (114)
T ss_dssp CCSEEEEEEECC
T ss_pred CCCeEEEEEEec
Confidence 345678877654
No 195
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.93 E-value=1.6e-09 Score=89.28 Aligned_cols=64 Identities=20% Similarity=0.311 Sum_probs=54.9
Q ss_pred cccCcEEecccc------------cccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 295 EIFGDELQMFAK------------KELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 295 ~~~G~~~~~~~~------------~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
..+||.+.++.. ...+.+|.+|.++|||+++||++||+|++|||+++.++++++++++|+...|
T Consensus 38 ~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~g 113 (139)
T 2vz5_A 38 LILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSE 113 (139)
T ss_dssp EECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHCCTTC
T ss_pred ccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC
Confidence 478999875432 1346799999999999999999999999999999999999999999987555
No 196
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.93 E-value=1.1e-09 Score=88.90 Aligned_cols=63 Identities=16% Similarity=0.329 Sum_probs=54.7
Q ss_pred ccccCcEEecccccc---cCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECC-CCCHHHHHHHHHhc
Q psy5022 294 QEIFGDELQMFAKKE---LQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVV-AVPHEKIVNLLATS 356 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~---~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~-~~~~~~~v~~l~~s 356 (359)
..+|||.+.++.... .+.+|..|.++|||+++| |++||+|++|||+++. ++++++++.+|+..
T Consensus 36 ~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 103 (128)
T 2db5_A 36 TGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQT 103 (128)
T ss_dssp SSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHC
T ss_pred CCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 368999998654332 367899999999999999 9999999999999997 99999999999873
No 197
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.93 E-value=2.2e-09 Score=83.60 Aligned_cols=62 Identities=21% Similarity=0.223 Sum_probs=53.4
Q ss_pred ccccCcEEecccc--------cccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 294 QEIFGDELQMFAK--------KELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 294 ~~~~G~~~~~~~~--------~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
..+|||.+.++.. ...+.+|.+|.++|||++ ||++||+|++|||+++.++++.+++.+++.+
T Consensus 20 ~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 89 (103)
T 1n7t_A 20 DPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTF 89 (103)
T ss_dssp SSCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHHHHC
T ss_pred CCCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHhhcC
Confidence 3479999987542 234678999999999999 9999999999999999999999999998853
No 198
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.93 E-value=1.4e-09 Score=94.57 Aligned_cols=62 Identities=31% Similarity=0.440 Sum_probs=55.9
Q ss_pred ccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 294 QEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
..+|||.+.++.....+.+|..|.+||||+++||++||+|++|||.++.++++++++.+|+.
T Consensus 95 ~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~ 156 (192)
T 3k1r_A 95 PEGLGLSVRGGLEFGCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRT 156 (192)
T ss_dssp TTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTS
T ss_pred CCceeEEEEcccccCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcC
Confidence 56899999876555557899999999999999999999999999999999999999999986
No 199
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.92 E-value=3.5e-09 Score=81.23 Aligned_cols=64 Identities=14% Similarity=0.305 Sum_probs=54.7
Q ss_pred ccccccCcEEecccc----cccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 292 NSQEIFGDELQMFAK----KELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~----~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
+...++||.+..... ...+.+|..|.++|||+++| |++||+|++|||.++.++++.+++.+++.
T Consensus 12 ~~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (97)
T 2iwn_A 12 KNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRH 80 (97)
T ss_dssp CBTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHT
T ss_pred cCCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 455679999986532 23467999999999999999 99999999999999999999999998876
No 200
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.92 E-value=3.7e-09 Score=81.26 Aligned_cols=81 Identities=28% Similarity=0.461 Sum_probs=60.9
Q ss_pred cEEEEeeCCCCCccceEEEecCCC--CcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCC
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWG--SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANG 275 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g--~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~ 275 (359)
..+|.+.|. +.+|||++.++... ....+++|..|.++|||+++|+|++||+|++|||.++.+ +...++ .+.
T Consensus 4 ~~~v~l~k~-~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 82 (97)
T 2jil_A 4 TVEVTLHKE-GNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQ 82 (97)
T ss_dssp EEEEEEECB-TTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCS
T ss_pred EEEEEEEeC-CCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 356888886 46999999864211 113478999999999999999999999999999998865 222222 567
Q ss_pred eEEEEEEeCc
Q psy5022 276 IEDHSFVKEM 285 (359)
Q Consensus 276 ~v~l~v~~~~ 285 (359)
.+.|.+.|+.
T Consensus 83 ~v~l~v~R~~ 92 (97)
T 2jil_A 83 EAALLIEYDV 92 (97)
T ss_dssp EEEEEEEEEC
T ss_pred eEEEEEEeCC
Confidence 8999988753
No 201
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.92 E-value=2.3e-09 Score=86.81 Aligned_cols=66 Identities=21% Similarity=0.244 Sum_probs=56.8
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
+...+|||.+..... ..+.+|..|.++|||+++||++||+|++|||+++.+++++++..+|+.+.|
T Consensus 17 ~~~~g~G~~l~~~~~-~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 82 (128)
T 2kjd_A 17 KGPSGYGFNLHSDKS-KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGD 82 (128)
T ss_dssp CCSSSCCEEEEECSS-SCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCS
T ss_pred cCCCcccEEEEecCC-CCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 455679999986432 237899999999999999999999999999999999999999999987654
No 202
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.92 E-value=5.7e-09 Score=84.11 Aligned_cols=82 Identities=20% Similarity=0.326 Sum_probs=63.2
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCCC
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KANG 275 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~ 275 (359)
...++|.|.|.. .+|||++.++. .....+++|..|.++|||+++|+|++||+|++|||+++.+ .+..+ ..+.
T Consensus 24 ~~~~~v~l~k~~-~glG~~l~~~~-~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~ 101 (124)
T 2daz_A 24 GELHIIELEKDK-NGLGLSLAGNK-DRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPS 101 (124)
T ss_dssp SEEEEEEEECCS-SCCCEEEECBS-STTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCS
T ss_pred CceEEEEEEeCC-CccCEEEeccC-CCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 345678999884 59999998532 2223578999999999999999999999999999999865 33323 2455
Q ss_pred eEEEEEEeCc
Q psy5022 276 IEDHSFVKEM 285 (359)
Q Consensus 276 ~v~l~v~~~~ 285 (359)
.+.|+|.|..
T Consensus 102 ~v~l~v~R~~ 111 (124)
T 2daz_A 102 KVKLVFIRNE 111 (124)
T ss_dssp EEEEEEEECT
T ss_pred eEEEEEEeCC
Confidence 7899988764
No 203
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.92 E-value=2.2e-09 Score=85.15 Aligned_cols=60 Identities=22% Similarity=0.354 Sum_probs=53.2
Q ss_pred cccCcEEecccccccCcEEEEEcCCChhhcCCC-CCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 295 EIFGDELQMFAKKELQKEICSLLRGGIAERGGV-RVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 295 ~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL-~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
.+|||.+... ..+.+|..|.++|||+++|| ++||+|++|||+++.++++++++++|+...
T Consensus 37 ~~lG~~i~~~---~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 97 (113)
T 1va8_A 37 IPLGATVRNE---MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMH 97 (113)
T ss_dssp CCCCEEEEEC---SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CceeEEEEeC---CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3789998753 34689999999999999998 999999999999999999999999998653
No 204
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=5.1e-09 Score=83.53 Aligned_cols=83 Identities=23% Similarity=0.341 Sum_probs=63.0
Q ss_pred ccEEEEeeCCC------CCccceEEEecCC---CCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HH
Q psy5022 203 LQKEVVVPKAK------GEILGVVIVESGW---GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YM 268 (359)
Q Consensus 203 ~~~~v~l~r~~------~~~lG~~i~~~~~---g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~ 268 (359)
..+++.+.|.. +.+|||+|.++.. .....+++|..|.++|||+++|+|++||+|++|||.++.+ ++
T Consensus 12 ~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 91 (117)
T 1ujd_A 12 PHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQ 91 (117)
T ss_dssp CEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHH
T ss_pred ceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHH
Confidence 44678888876 4689999985421 1112368999999999999999999999999999999865 33
Q ss_pred Hhhc-CCCeEEEEEEeCc
Q psy5022 269 EFLK-ANGIEDHSFVKEM 285 (359)
Q Consensus 269 ~~~~-~~~~v~l~v~~~~ 285 (359)
..++ .+..++|+|.|+.
T Consensus 92 ~~l~~~~~~v~l~v~R~~ 109 (117)
T 1ujd_A 92 SIISQQSGEAEICVRLDL 109 (117)
T ss_dssp HHHSCCSSCEEEEEESSC
T ss_pred HHHhcCCCEEEEEEEECC
Confidence 3333 4567999988764
No 205
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.92 E-value=9.7e-10 Score=87.67 Aligned_cols=63 Identities=21% Similarity=0.366 Sum_probs=54.3
Q ss_pred ccccCcEEecccc---cccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECC-CCCHHHHHHHHHhc
Q psy5022 294 QEIFGDELQMFAK---KELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVV-AVPHEKIVNLLATS 356 (359)
Q Consensus 294 ~~~~G~~~~~~~~---~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~-~~~~~~~v~~l~~s 356 (359)
..+|||.+.++.. ...+.+|.+|.++|||+++| |++||+|++|||+++. ++++++++.+++..
T Consensus 31 ~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 98 (117)
T 2o2t_A 31 SGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKA 98 (117)
T ss_dssp SSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHC
T ss_pred CCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 4678999986542 23467899999999999999 9999999999999998 89999999999863
No 206
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=1.2e-09 Score=84.66 Aligned_cols=63 Identities=25% Similarity=0.414 Sum_probs=54.1
Q ss_pred cccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 293 SQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
...+|||.+........+.+|..|.++|||+++||++||+|++|||+++.++++.+++..++.
T Consensus 19 ~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~ 81 (101)
T 1uez_A 19 AHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAEAVKALKG 81 (101)
T ss_dssp TTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHHHHHHHSSS
T ss_pred CCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHhhcC
Confidence 356899999876544457899999999999999999999999999999999999887777654
No 207
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=5.4e-09 Score=81.93 Aligned_cols=80 Identities=28% Similarity=0.350 Sum_probs=61.2
Q ss_pred ccEEEEeeCCCCCccceEEEecC------CCCcCCcEEEEEECCCChhhhc-CCCCCCCEEEEECCccHHH-----HHHh
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESG------WGSMLPTVVIANLAPAGAAARC-GQLNIGDQIIAVNGVSLVA-----YMEF 270 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~------~g~~~~~~~V~~v~~~s~A~~~-G~L~~GD~Il~Vng~~v~~-----~~~~ 270 (359)
..++|.|.|. ..+|||+|.++. ++....+++|..|.++|||+++ | |++||+|++|||.++.+ ++..
T Consensus 8 ~~~~v~l~k~-~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~agg-L~~GD~Il~vng~~v~~~~~~~~~~~ 85 (107)
T 1uhp_A 8 KSLTLVLHRD-SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGG-LQIHDRIIEVNGRDLSRATHDQAVEA 85 (107)
T ss_dssp EEEEEEECCS-SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTC-CCSSCEEEEETTEECTTCCHHHHHHH
T ss_pred EEEEEEEEeC-CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3567899988 569999998542 1122357899999999999999 7 99999999999999865 3333
Q ss_pred hc-CCCeEEEEEEeC
Q psy5022 271 LK-ANGIEDHSFVKE 284 (359)
Q Consensus 271 ~~-~~~~v~l~v~~~ 284 (359)
++ .+..+.|.+.|.
T Consensus 86 ~~~~~~~v~l~v~R~ 100 (107)
T 1uhp_A 86 FKTAKEPIVVQVLRR 100 (107)
T ss_dssp HHHCCSSEEEEEEEC
T ss_pred HHcCCCcEEEEEEeC
Confidence 32 456788888765
No 208
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=6.4e-09 Score=82.51 Aligned_cols=83 Identities=28% Similarity=0.383 Sum_probs=62.6
Q ss_pred cccEEEEeeCCCCCccceEEEecC----CCCc-CCcEEEEEECCCChhhh-cCCCCCCCEEEEECCccHHH-----HHHh
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESG----WGSM-LPTVVIANLAPAGAAAR-CGQLNIGDQIIAVNGVSLVA-----YMEF 270 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~----~g~~-~~~~~V~~v~~~s~A~~-~G~L~~GD~Il~Vng~~v~~-----~~~~ 270 (359)
..+++|.+.|...++|||+|.++. .|.. ..+++|..|.++|||++ +| |++||+|++|||.++.+ +...
T Consensus 9 ~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~~ 87 (114)
T 1uew_A 9 LQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVKL 87 (114)
T ss_dssp CCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHHH
T ss_pred ccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 345789999987789999998542 1211 12569999999999999 89 99999999999999865 2222
Q ss_pred hc-CCCeEEEEEEeCc
Q psy5022 271 LK-ANGIEDHSFVKEM 285 (359)
Q Consensus 271 ~~-~~~~v~l~v~~~~ 285 (359)
++ .+..+.|.|.|..
T Consensus 88 l~~~g~~v~l~v~r~~ 103 (114)
T 1uew_A 88 IKDAGLSVTLRIIPQE 103 (114)
T ss_dssp HHHTTTEEEEEECCCS
T ss_pred HHcCCCeEEEEEEeCC
Confidence 22 5678999988764
No 209
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=8.5e-09 Score=81.19 Aligned_cols=82 Identities=24% Similarity=0.351 Sum_probs=63.1
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCC-cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCCC
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGS-MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KANG 275 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~-~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~ 275 (359)
..+++.|.|.. .+|||++.++.... ...+++|..|.++|||+++|+|++||+|++|||.++.+ .+..+ ..+.
T Consensus 8 ~~~~v~l~~~~-~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 86 (110)
T 1um1_A 8 YVFTVELERGP-SGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGGK 86 (110)
T ss_dssp CEEEEEEECCT-TCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCCS
T ss_pred cEEEEEEEECC-CccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 45678898876 58999998642211 23578999999999999999999999999999999864 33222 2466
Q ss_pred eEEEEEEeCc
Q psy5022 276 IEDHSFVKEM 285 (359)
Q Consensus 276 ~v~l~v~~~~ 285 (359)
.+.|.+.|..
T Consensus 87 ~v~l~v~R~~ 96 (110)
T 1um1_A 87 KMRFLVAKSD 96 (110)
T ss_dssp EEEEEEECCC
T ss_pred eEEEEEEeCC
Confidence 8899998764
No 210
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.92 E-value=1.3e-09 Score=98.94 Aligned_cols=63 Identities=17% Similarity=0.314 Sum_probs=57.7
Q ss_pred ccccCcEEecccccccCcEEEEEcCCChhhc-CCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 294 QEIFGDELQMFAKKELQKEICSLLRGGIAER-GGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~-~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
..+|||.+.++.....+.+|.+|.+||||++ +||++||+|++|||+++.+++|++++.+|+.+
T Consensus 88 ~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~ 151 (263)
T 1z87_A 88 AGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT 151 (263)
T ss_dssp TCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHC
T ss_pred CCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcC
Confidence 4789999998765556789999999999999 89999999999999999999999999999976
No 211
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.92 E-value=7.9e-09 Score=79.53 Aligned_cols=80 Identities=26% Similarity=0.454 Sum_probs=61.6
Q ss_pred cEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCeE
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGIE 277 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~v 277 (359)
.++|.+.|.. .+|||++.++. .....+++|..|.++|||+++|+|++||+|++|||.++.+ ++..++ .+..+
T Consensus 5 ~~~v~l~~~~-~~lG~~l~~~~-~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 82 (98)
T 2opg_A 5 ETTIEISKGR-TGLGLSIVGGS-DTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRV 82 (98)
T ss_dssp EEEEEEECBT-TBTCEEEEECT-TSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred EEEEEEEECC-CcccEEEecCC-CCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 4568888885 58999998532 1122478999999999999999999999999999999865 333333 34678
Q ss_pred EEEEEeCc
Q psy5022 278 DHSFVKEM 285 (359)
Q Consensus 278 ~l~v~~~~ 285 (359)
.|.+.|+.
T Consensus 83 ~l~v~R~~ 90 (98)
T 2opg_A 83 RLTLYRDE 90 (98)
T ss_dssp EEEEEECS
T ss_pred EEEEEcCC
Confidence 89888754
No 212
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.91 E-value=1.5e-09 Score=88.11 Aligned_cols=63 Identities=14% Similarity=0.324 Sum_probs=55.4
Q ss_pred cccccCcEEecccc-----cccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 293 SQEIFGDELQMFAK-----KELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 293 ~~~~~G~~~~~~~~-----~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
...+|||.+.++.. ...+.+|..|.++|||+++| |++||+|++|||+++.++++++++++|+.
T Consensus 25 ~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 93 (129)
T 2dmz_A 25 DGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN 93 (129)
T ss_dssp TTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH
T ss_pred CCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 56789999987533 22367899999999999999 99999999999999999999999999987
No 213
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.91 E-value=1.2e-09 Score=86.36 Aligned_cols=64 Identities=17% Similarity=0.128 Sum_probs=55.2
Q ss_pred eccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 291 LNSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
.+...++||.+.+. .+.+|..|.+++||+++||++||+|++|||+++.++++++++++|+...+
T Consensus 22 ~~~~~~~G~~l~~~----~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~ 85 (111)
T 1vae_A 22 TVEEGDLGFTLRGN----TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGG 85 (111)
T ss_dssp ECCSSCCSCCEESS----SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTT
T ss_pred EcCCCcccEEEeCC----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 34567889988642 36789999999999999999999999999999998899999999987654
No 214
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.91 E-value=4.7e-09 Score=82.24 Aligned_cols=80 Identities=18% Similarity=0.190 Sum_probs=61.1
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcC-CCCCCCEEEEECCccHHH-----H---HHhhc
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCG-QLNIGDQIIAVNGVSLVA-----Y---MEFLK 272 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G-~L~~GD~Il~Vng~~v~~-----~---~~~~~ 272 (359)
...+.+.|.|....+|||.+.++.. ...+++|..|.++|||+++| +|++||+|++|||.++.+ . ++...
T Consensus 16 ~~~~~v~l~~~~~~~~G~~~~gg~~--~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~ 93 (107)
T 3nfk_A 16 DNLVLIRMKPDENGRFGFNVKGGYD--QKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASC 93 (107)
T ss_dssp CCCEEEEECCCTTSCCCEEEEEEGG--GTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGG
T ss_pred CCEEEEEEEcCCCCCCCEEEEccCC--CCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 4567789999876799999985321 12368999999999999999 699999999999999875 2 33322
Q ss_pred C--CCeEEEEEEe
Q psy5022 273 A--NGIEDHSFVK 283 (359)
Q Consensus 273 ~--~~~v~l~v~~ 283 (359)
. +..+.|+|.|
T Consensus 94 ~~~~~~v~l~v~r 106 (107)
T 3nfk_A 94 ERHSGELMLLVRP 106 (107)
T ss_dssp GSBTTBEEEEEEC
T ss_pred ccCCcEEEEEEEc
Confidence 2 2478888875
No 215
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.91 E-value=2.1e-09 Score=84.87 Aligned_cols=63 Identities=21% Similarity=0.370 Sum_probs=55.2
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.+.. ..+.+|..|.++|||+++| |++||+|++|||+++.++++++++.+|+..
T Consensus 23 ~~~~~lG~~l~~~~--~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 86 (111)
T 2dlu_A 23 NDGSGLGFGIVGGK--TSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNC 86 (111)
T ss_dssp CCSSCCCEEEECCS--SSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHH
T ss_pred eCCCccCEEEeccC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45678999998542 2478999999999999999 999999999999999999999999999864
No 216
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.91 E-value=7.8e-09 Score=83.41 Aligned_cols=79 Identities=23% Similarity=0.344 Sum_probs=62.2
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCe
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGI 276 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~ 276 (359)
..+++.+.|....+|||++.++.. ...+++|..|.++|||+++|+|++||+|++|||.++.+ +...++ .++.
T Consensus 19 ~~~~v~l~k~~~~~lG~~i~gg~~--~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~ 96 (125)
T 3hpk_A 19 VPGKVTLQKDAQNLIGISIGGGAQ--YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 96 (125)
T ss_dssp EEEEEEEECCTTSCCCEEEEECSS--CCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSE
T ss_pred CCeEEEEEeCCCCCcCEEEeccCC--CCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 456788999888899999986431 23578999999999999999999999999999999874 233222 3456
Q ss_pred EEEEEEe
Q psy5022 277 EDHSFVK 283 (359)
Q Consensus 277 v~l~v~~ 283 (359)
++|.+.+
T Consensus 97 v~l~v~r 103 (125)
T 3hpk_A 97 VTIHYNK 103 (125)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8888876
No 217
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.91 E-value=1.7e-09 Score=85.03 Aligned_cols=65 Identities=18% Similarity=0.298 Sum_probs=55.6
Q ss_pred ccccccCcEEe-----ccccc---ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQ-----MFAKK---ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~-----~~~~~---~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+. ++... ..+.+|.+|.++|||+++| |++||+|++|||+++.++++.+++.+++.+
T Consensus 17 k~~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 90 (108)
T 1q7x_A 17 KNDNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNT 90 (108)
T ss_dssp SSSCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHHT
T ss_pred ECCCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 44578999998 54332 3478999999999999999 999999999999999999999999999864
No 218
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.91 E-value=5.3e-09 Score=89.03 Aligned_cols=81 Identities=27% Similarity=0.391 Sum_probs=62.3
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCC----cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK- 272 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~----~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~- 272 (359)
...+|.|.|.. .+|||+|.+++.|. ...+++|..|.++|||+++|+|++||+|++|||.++.+ ++..++
T Consensus 80 ~~~~v~l~k~~-~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~ 158 (170)
T 3egg_C 80 ELFPVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN 158 (170)
T ss_dssp EEEEEEEECBT-TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHH
T ss_pred eEEEEEEEeCC-CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 34568888886 58999998733332 23478999999999999999999999999999999865 333332
Q ss_pred CCCeEEEEEEeC
Q psy5022 273 ANGIEDHSFVKE 284 (359)
Q Consensus 273 ~~~~v~l~v~~~ 284 (359)
.+..++|+|.|+
T Consensus 159 ~g~~v~L~V~R~ 170 (170)
T 3egg_C 159 TKGRVRFMIGRE 170 (170)
T ss_dssp CCSEEEEEEEEC
T ss_pred CCCEEEEEEEeC
Confidence 456899988763
No 219
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.91 E-value=6.3e-09 Score=81.47 Aligned_cols=81 Identities=22% Similarity=0.340 Sum_probs=60.9
Q ss_pred ccEEEEeeCCCCCccceEEEecCC---------CC-cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----H
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGW---------GS-MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----Y 267 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~---------g~-~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~ 267 (359)
..+.+.|.|..+ +|||++.++.. +. ..+.++|..|.++|||+++| |++||+|++|||.++.+ +
T Consensus 6 ~~r~v~l~k~~~-g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~ 83 (107)
T 3qe1_A 6 SPRVVRIVKSES-GYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQV 83 (107)
T ss_dssp CCEEEEEECBTT-BTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred CcEEEEEEECCC-CCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 456789999865 89999985421 10 02445799999999999999 99999999999999874 3
Q ss_pred HHhhc-CCCeEEEEEEeCc
Q psy5022 268 MEFLK-ANGIEDHSFVKEM 285 (359)
Q Consensus 268 ~~~~~-~~~~v~l~v~~~~ 285 (359)
...++ .+..+.|++.|..
T Consensus 84 ~~~l~~~g~~v~l~v~r~~ 102 (107)
T 3qe1_A 84 VDLIRAGEKELILTVLSVE 102 (107)
T ss_dssp HHHHHHCSSEEEEEEECSS
T ss_pred HHHHHcCCCEEEEEEEcCC
Confidence 33322 4678999888753
No 220
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.91 E-value=8.1e-10 Score=87.31 Aligned_cols=63 Identities=32% Similarity=0.447 Sum_probs=55.2
Q ss_pred ccccCcEEecccc---------cccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 294 QEIFGDELQMFAK---------KELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 294 ~~~~G~~~~~~~~---------~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
..+|||.+.++.. ...+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 20 ~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~ 92 (111)
T 1uju_A 20 GERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSV 92 (111)
T ss_dssp TCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSSC
T ss_pred CCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4789999987652 23467999999999999999 999999999999999999999999999863
No 221
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.91 E-value=1.2e-09 Score=84.62 Aligned_cols=63 Identities=17% Similarity=0.233 Sum_probs=54.0
Q ss_pred cccccCcEEecccccccCcEEEEEcCCChhhcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 293 SQEIFGDELQMFAKKELQKEICSLLRGGIAERG-GVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~-gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
....|||.+.++.....+.+|.+|.++|||+++ ||++||+|++|||+++.++ +.+++.+++.+
T Consensus 19 ~~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~ 82 (100)
T 2edp_A 19 GGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGS 82 (100)
T ss_dssp SCSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTC
T ss_pred CCCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhC
Confidence 345789999876554456789999999999998 9999999999999999987 88899998864
No 222
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.91 E-value=2.7e-09 Score=84.64 Aligned_cols=65 Identities=20% Similarity=0.308 Sum_probs=56.4
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.++.....+.+|..|.++|||+++||++||+|++|||+++.++++.+++.+++..
T Consensus 24 ~~~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 88 (114)
T 1x5n_A 24 VGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSS 88 (114)
T ss_dssp CSSCCCCEEEEECCSSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHHC
T ss_pred cCCCceeEEEeecCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 45678999998765445578999999999999999999999999999999999988888888754
No 223
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.91 E-value=3.8e-09 Score=82.01 Aligned_cols=78 Identities=22% Similarity=0.325 Sum_probs=61.7
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCC
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANG 275 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~ 275 (359)
...+.+.|.|.. .+|||.+.... ...+++|..|.++|||+++| |++||+|++|||.++.+ +...++ .+.
T Consensus 5 ~~~r~v~l~k~~-~g~G~~l~~~~---~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 79 (102)
T 2d90_A 5 SSGRVVVIKKGS-NGYGFYLRAGP---EQKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGD 79 (102)
T ss_dssp SSSEEEEEECCS-SSSSCEEEECS---SSSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHSTT
T ss_pred CCCEEEEEeeCC-CCccEEEEeec---CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 456789999986 48999998532 23478999999999999999 99999999999999865 333332 367
Q ss_pred eEEEEEEeC
Q psy5022 276 IEDHSFVKE 284 (359)
Q Consensus 276 ~v~l~v~~~ 284 (359)
.+.|.+.+.
T Consensus 80 ~v~l~v~r~ 88 (102)
T 2d90_A 80 QTTLLVLDK 88 (102)
T ss_dssp EEEEEECST
T ss_pred EEEEEEEEC
Confidence 899988764
No 224
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.91 E-value=2.3e-09 Score=85.11 Aligned_cols=63 Identities=25% Similarity=0.310 Sum_probs=54.3
Q ss_pred cccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 293 SQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
....|||.+.... ...+.+|..|.++|||+++||++||+|++|||+++.++++.+++++++..
T Consensus 23 ~~~~~G~~l~~~~-~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 85 (114)
T 2edz_A 23 EGQNYGFFLRIEK-DTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKS 85 (114)
T ss_dssp TTCCCSCEEECCT-TCCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHT
T ss_pred CCCcccEEEEEec-CCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3567899887532 23478999999999999999999999999999999999999999999864
No 225
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.90 E-value=5.8e-09 Score=81.47 Aligned_cols=82 Identities=22% Similarity=0.353 Sum_probs=62.2
Q ss_pred ccEEEEeeCCCCCccceEEEecCC----CCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGW----GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK- 272 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~----g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~- 272 (359)
...++.|.|.. .+|||++.++.. .....+++|..|.++|||+++|+|++||+|++|||.++.+ ++..++
T Consensus 7 ~~~~v~l~~~~-~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 85 (105)
T 1wha_A 7 GRHVACLARSE-RGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTA 85 (105)
T ss_dssp EEEEEEECCCT-TCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTS
T ss_pred eeEEEEEEeCC-CccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 34568888875 479999985321 0123578999999999999999999999999999999865 444443
Q ss_pred CCCeEEEEEEeCc
Q psy5022 273 ANGIEDHSFVKEM 285 (359)
Q Consensus 273 ~~~~v~l~v~~~~ 285 (359)
.+..+.|+|.|..
T Consensus 86 ~g~~v~l~v~R~~ 98 (105)
T 1wha_A 86 ASPTIALLLEREA 98 (105)
T ss_dssp CCSCEEEEEEECC
T ss_pred CCCeEEEEEEECC
Confidence 3567889888753
No 226
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.90 E-value=4e-09 Score=84.96 Aligned_cols=64 Identities=19% Similarity=0.225 Sum_probs=54.3
Q ss_pred ccccCcEEecccc---------cccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 294 QEIFGDELQMFAK---------KELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 294 ~~~~G~~~~~~~~---------~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
...|||.+.+... ...+.+|..|.++|||+++| |++||+|++|||+++.++++++++++|+...
T Consensus 35 ~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 108 (123)
T 2iwq_A 35 SKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAG 108 (123)
T ss_dssp TSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4678998875432 12367999999999999999 9999999999999999999999999998753
No 227
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.90 E-value=6.4e-09 Score=78.99 Aligned_cols=74 Identities=16% Similarity=0.264 Sum_probs=58.3
Q ss_pred cEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCeE
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGIE 277 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~v 277 (359)
.+.+.|.|.. .+|||.+.+. .+++|..|.++|||+++| |++||+|++|||.++.+ +...++ .+..+
T Consensus 4 ~r~v~l~~~~-~g~G~~l~~~------~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v 75 (91)
T 2f5y_A 4 YRQITIPRGK-DGFGFTICCD------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEI 75 (91)
T ss_dssp EEEEEEECBT-TBTSEEEECS------SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEE
T ss_pred eEEEEEEeCC-CCccEEEecC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 4678898876 4899998742 247899999999999999 99999999999999874 333333 35578
Q ss_pred EEEEEeCc
Q psy5022 278 DHSFVKEM 285 (359)
Q Consensus 278 ~l~v~~~~ 285 (359)
.|++.|..
T Consensus 76 ~l~v~R~~ 83 (91)
T 2f5y_A 76 ILLVWRMV 83 (91)
T ss_dssp EEEEEECC
T ss_pred EEEEEeCC
Confidence 88888753
No 228
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.90 E-value=8.4e-09 Score=78.75 Aligned_cols=79 Identities=14% Similarity=0.217 Sum_probs=56.5
Q ss_pred ccEEEEeeCCCC--CccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH----HHHhhcCCCe
Q psy5022 203 LQKEVVVPKAKG--EILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA----YMEFLKANGI 276 (359)
Q Consensus 203 ~~~~v~l~r~~~--~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~----~~~~~~~~~~ 276 (359)
..+.+.+.|... .+|||++...... ...+++|..|.++|||+++| |++||+|++|||+++.+ .+..+-.+..
T Consensus 6 ~~~~v~i~k~~~~~~~~Gf~v~~~~~~-~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~~~ 83 (94)
T 3kzd_A 6 VTHSIHIEKSDTAADTYGFSLSSVEED-GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQPS 83 (94)
T ss_dssp EEEEEEEEC------CCSEEEEEECSS-SSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHSSE
T ss_pred ceeEEEEEeCCCCcCCcCEEEEecCCC-CcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCe
Confidence 456788988763 4799999753211 12478999999999999999 99999999999999986 2322223456
Q ss_pred EEEEEEe
Q psy5022 277 EDHSFVK 283 (359)
Q Consensus 277 v~l~v~~ 283 (359)
++++|..
T Consensus 84 l~ltV~~ 90 (94)
T 3kzd_A 84 LGLLVRT 90 (94)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 7777653
No 229
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.90 E-value=1.1e-08 Score=80.43 Aligned_cols=80 Identities=24% Similarity=0.331 Sum_probs=60.1
Q ss_pred cEEEEeeCCCCCccceEEEecCC-C----C-----cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HH
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGW-G----S-----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YM 268 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~-g----~-----~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~ 268 (359)
.+++.|.|....+|||++.++.. + . ...+++|..|.++|||+++| |++||+|++|||.++.+ +.
T Consensus 8 ~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~ 86 (109)
T 1q3o_A 8 EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVV 86 (109)
T ss_dssp EEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHH
T ss_pred cEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHH
Confidence 45788987777899999986421 1 0 01268999999999999999 99999999999998866 33
Q ss_pred Hhhc-CCCeEEEEEEeC
Q psy5022 269 EFLK-ANGIEDHSFVKE 284 (359)
Q Consensus 269 ~~~~-~~~~v~l~v~~~ 284 (359)
..++ .+..+.|++.+.
T Consensus 87 ~~l~~~~~~v~l~v~~~ 103 (109)
T 1q3o_A 87 NMIRQGGNTLMVKVVMV 103 (109)
T ss_dssp HHHHHTTTEEEEEEEEE
T ss_pred HHHHhCCCEEEEEEEEC
Confidence 3332 356788887753
No 230
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.90 E-value=1e-08 Score=78.80 Aligned_cols=80 Identities=28% Similarity=0.434 Sum_probs=61.2
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCCCe
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KANGI 276 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~~ 276 (359)
..++|.+.|. +++|||++.+.. ....+++|..|.++|||+++|+|++||+|++|||.++.+ +...+ ..+..
T Consensus 5 ~~~~v~l~~~-~~~lG~~i~~~~--~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~ 81 (97)
T 1n7e_A 5 IIYTVELKRY-GGPLGITISGTE--EPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGET 81 (97)
T ss_dssp CEEEEEEECT-TSCCCEEEECCS--STTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred eEEEEEEEeC-CCCcCEEEEccc--CCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 3467888776 458999998532 112478999999999999999999999999999999854 33333 35668
Q ss_pred EEEEEEeCc
Q psy5022 277 EDHSFVKEM 285 (359)
Q Consensus 277 v~l~v~~~~ 285 (359)
+.|++.|+.
T Consensus 82 v~l~v~R~~ 90 (97)
T 1n7e_A 82 VTLKIKKQT 90 (97)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEeCC
Confidence 899888753
No 231
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.89 E-value=1.4e-09 Score=85.86 Aligned_cols=83 Identities=28% Similarity=0.427 Sum_probs=64.0
Q ss_pred cccEEEEeeCCCCCccceEEEecCC---C----CcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHH
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGW---G----SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YME 269 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~---g----~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~ 269 (359)
...++|.|.|..+++|||++.++.. + ....+++|..|.++|||+++|+|++||+|++|||.++.+ ++.
T Consensus 8 ~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 87 (111)
T 1uju_A 8 PGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQ 87 (111)
T ss_dssp CSSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHH
T ss_pred CccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3456799999887899999985431 1 122468999999999999999999999999999999884 334
Q ss_pred hhc-CCCeEEEEEEeC
Q psy5022 270 FLK-ANGIEDHSFVKE 284 (359)
Q Consensus 270 ~~~-~~~~v~l~v~~~ 284 (359)
.++ .+..+.|.|.|.
T Consensus 88 ~l~~~g~~v~l~v~r~ 103 (111)
T 1uju_A 88 LLRSVGDTLTVLVCDG 103 (111)
T ss_dssp HHSSCSSEEEECCCCC
T ss_pred HHHcCCCeEEEEEEEC
Confidence 333 456788887764
No 232
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.89 E-value=2.4e-09 Score=83.42 Aligned_cols=80 Identities=20% Similarity=0.358 Sum_probs=60.9
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----H---HHhhcCC
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----Y---MEFLKAN 274 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~---~~~~~~~ 274 (359)
..+++.|.|.. .+|||.+.++. . ...+++|..|.++|||+++|+|++||+|++|||+++.+ + ++....+
T Consensus 9 ~~~~v~l~~~~-~g~G~~i~~g~-~-~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g 85 (103)
T 1uep_A 9 KELDVHLRRME-SGFGFRILGGD-E-PGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARN 85 (103)
T ss_dssp EEECCEEESSS-SSCCEEECCCC-S-TTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHH
T ss_pred eEEEEEEEeCC-CccCEEEeeec-C-CCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 34568888864 58999998432 1 23468999999999999999999999999999999854 3 3333225
Q ss_pred CeEEEEEEeCc
Q psy5022 275 GIEDHSFVKEM 285 (359)
Q Consensus 275 ~~v~l~v~~~~ 285 (359)
..++|+|.|..
T Consensus 86 ~~v~l~v~R~~ 96 (103)
T 1uep_A 86 GQVNLTVRRKV 96 (103)
T ss_dssp TEEEEEEEEEC
T ss_pred CcEEEEEEeCC
Confidence 68999998753
No 233
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.89 E-value=5.2e-09 Score=78.74 Aligned_cols=76 Identities=20% Similarity=0.192 Sum_probs=56.1
Q ss_pred EEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhcC-CCeEEEE
Q psy5022 207 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLKA-NGIEDHS 280 (359)
Q Consensus 207 v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~~-~~~v~l~ 280 (359)
+.+.+....+|||.+.++.. ...+++|..|.++|||+++| |++||+|++|||.++.+ +...++. ...+.|.
T Consensus 4 ~~v~~~~~~~lG~~l~~~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~ 80 (87)
T 2pa1_A 4 LTVDVAGPAPWGFRITGGRD--FHTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQ 80 (87)
T ss_dssp EEEEECSSSCCSEEEEEEGG--GTEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEE
T ss_pred EEEEECCCCccCEEEecccC--CCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 44444555799999985321 12478999999999999999 99999999999998865 3333322 2578888
Q ss_pred EEeCc
Q psy5022 281 FVKEM 285 (359)
Q Consensus 281 v~~~~ 285 (359)
+.|+.
T Consensus 81 v~R~~ 85 (87)
T 2pa1_A 81 LDRIT 85 (87)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 88753
No 234
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.89 E-value=9.3e-09 Score=82.76 Aligned_cols=80 Identities=16% Similarity=0.237 Sum_probs=62.2
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----H---HHhhcCC
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----Y---MEFLKAN 274 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~---~~~~~~~ 274 (359)
..++|.|.|.. .+|||.+.++.. ...+++|..|.++|||+++|+|++||+|++|||+++.+ + ++....+
T Consensus 19 ~~~~v~l~~~~-~glG~~~~~g~~--~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g 95 (123)
T 1ueq_A 19 TFLSTTLKKSN-MGFGFTIIGGDE--PDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIG 95 (123)
T ss_dssp EEEEEEEECCT-TSCSEEEECCSS--SSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTT
T ss_pred cEEEEEEEeCC-CceeEEEecccC--CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 34568888875 589999985321 23468999999999999999999999999999998863 3 3333346
Q ss_pred CeEEEEEEeCc
Q psy5022 275 GIEDHSFVKEM 285 (359)
Q Consensus 275 ~~v~l~v~~~~ 285 (359)
..+.|.|.|..
T Consensus 96 ~~v~l~v~R~~ 106 (123)
T 1ueq_A 96 QSVNLVLCRGY 106 (123)
T ss_dssp CEEEEEEEESC
T ss_pred CeEEEEEEeCC
Confidence 78999998764
No 235
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.88 E-value=4.5e-09 Score=81.96 Aligned_cols=79 Identities=28% Similarity=0.400 Sum_probs=59.2
Q ss_pred cEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH--------HHHhh---c
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--------YMEFL---K 272 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--------~~~~~---~ 272 (359)
.+.|.+.|.. .+|||+|.++. ....+.++|..|.+++||+++|+|++||+|++|||.++.+ +++.. .
T Consensus 7 ~~~v~l~k~~-~glG~~i~gg~-~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~ 84 (103)
T 1ufx_A 7 GTLVRVKKSA-ATLGIAIEGGA-NTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTK 84 (103)
T ss_dssp SEEEEEECCS-SSCCEEEECBT-TSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCS
T ss_pred eEEEEEEcCC-CcCCeEEECCC-CCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccC
Confidence 4678887764 69999998542 2223456999999999999999999999999999999855 33332 1
Q ss_pred CCCeEEEEEEeC
Q psy5022 273 ANGIEDHSFVKE 284 (359)
Q Consensus 273 ~~~~v~l~v~~~ 284 (359)
.++.+.+.+.|.
T Consensus 85 ~~~~i~l~v~r~ 96 (103)
T 1ufx_A 85 DRDYIDFLVTEF 96 (103)
T ss_dssp SCSEEEEEECCC
T ss_pred CCCeEEEEEEEc
Confidence 355677777654
No 236
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.88 E-value=4.7e-09 Score=83.95 Aligned_cols=84 Identities=17% Similarity=0.301 Sum_probs=61.9
Q ss_pred ccccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc--C
Q psy5022 201 KELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK--A 273 (359)
Q Consensus 201 ~~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~--~ 273 (359)
.+..+.+.+.|..+.+|||.+.++ .+....+++|..|.++|||+++|+|++||+|++|||+++.+ ++..++ .
T Consensus 13 ~~~~~~v~l~~~~~~~lG~~i~g~-~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~ 91 (119)
T 1x6d_A 13 LDGIHVTILHKEEGAGLGFSLAGG-ADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAR 91 (119)
T ss_dssp CTTEEEEEEECCTTSCCSEEEECC-SSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTT
T ss_pred CCCeEEEEEEeCCCCccCEEEeCC-CCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 345667888887778999999853 22223578999999999999999999999999999999874 333222 2
Q ss_pred CCeEEEEEEeCc
Q psy5022 274 NGIEDHSFVKEM 285 (359)
Q Consensus 274 ~~~v~l~v~~~~ 285 (359)
+..+.+.+.|..
T Consensus 92 ~~~~~l~v~R~~ 103 (119)
T 1x6d_A 92 EPRQAVIVTRKL 103 (119)
T ss_dssp SSSEEEEEEECC
T ss_pred CCeEEEEEEcCC
Confidence 334556666653
No 237
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.88 E-value=1.2e-09 Score=84.68 Aligned_cols=62 Identities=16% Similarity=0.228 Sum_probs=53.7
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
+...+|||.+... .+.+|..|.++|||+++||++||+|++|||+++.++++.+++++|+...
T Consensus 23 ~~~~g~G~~~~~~----~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 84 (100)
T 1whd_A 23 RGKDGFGFTICCD----SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCP 84 (100)
T ss_dssp CCSSSSSCBCCCS----SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHCS
T ss_pred CCCCeeeEEEeCC----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4456788887642 4678999999999999999999999999999999999999999998653
No 238
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.88 E-value=2.2e-09 Score=87.00 Aligned_cols=81 Identities=23% Similarity=0.313 Sum_probs=60.4
Q ss_pred EEEEeeCCCCCccceEEEecCCC--CcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH--------HHHhh---
Q psy5022 205 KEVVVPKAKGEILGVVIVESGWG--SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--------YMEFL--- 271 (359)
Q Consensus 205 ~~v~l~r~~~~~lG~~i~~~~~g--~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--------~~~~~--- 271 (359)
.++.+.|....+|||+|.++... ....+++|..|.++|||+++|+|++||+|++|||+++.+ +++..
T Consensus 27 ~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 106 (127)
T 1wg6_A 27 LEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSM 106 (127)
T ss_dssp EEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHH
T ss_pred EEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhcc
Confidence 34666655567999999853210 012368999999999999999999999999999998866 33333
Q ss_pred --cCCCeEEEEEEeCc
Q psy5022 272 --KANGIEDHSFVKEM 285 (359)
Q Consensus 272 --~~~~~v~l~v~~~~ 285 (359)
..+..++|+|.|..
T Consensus 107 ~g~~~~~v~l~v~R~~ 122 (127)
T 1wg6_A 107 EGNIRGMIQLVILRRS 122 (127)
T ss_dssp HHHHTCEEEEEEEECS
T ss_pred ccCCCCEEEEEEEeCC
Confidence 23678999998753
No 239
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.88 E-value=1.4e-09 Score=86.55 Aligned_cols=65 Identities=20% Similarity=0.278 Sum_probs=55.7
Q ss_pred ccccccCcEEecccccc-cCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKKE-LQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~-~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.++.... .+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 25 ~~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 91 (116)
T 2dm8_A 25 KGRSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQT 91 (116)
T ss_dssp CCSSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTC
T ss_pred ECCCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 44568899988654332 367899999999999999 999999999999999999999999999864
No 240
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.88 E-value=2.4e-09 Score=85.38 Aligned_cols=62 Identities=26% Similarity=0.306 Sum_probs=54.2
Q ss_pred ccccCcEEeccccc------ccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 294 QEIFGDELQMFAKK------ELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 294 ~~~~G~~~~~~~~~------~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
..+|||.+.++... ..+.+|.+|.++|||+ +||++||+|++|||+++.+++|.+++.+++..
T Consensus 25 ~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~~ 92 (117)
T 2csj_A 25 KRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQLRKS 92 (117)
T ss_dssp SSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHHHHS
T ss_pred CCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHHhcC
Confidence 47899999876432 3467999999999997 89999999999999999999999999999863
No 241
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.88 E-value=5.6e-09 Score=81.81 Aligned_cols=76 Identities=25% Similarity=0.336 Sum_probs=55.6
Q ss_pred eeCCCCCccceEEEecCCCCc----CCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCCCeEE
Q psy5022 209 VPKAKGEILGVVIVESGWGSM----LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KANGIED 278 (359)
Q Consensus 209 l~r~~~~~lG~~i~~~~~g~~----~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~~v~ 278 (359)
+.+....+|||+|.++ .+.. ..+++|..|.++|||+++|+|++||+|++|||.++.+ .+..+ ..++.++
T Consensus 7 ~~~~~~~~~Gf~i~gG-~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~ 85 (106)
T 4amh_A 7 LVPRGSKGLGFSIAGG-VGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVY 85 (106)
T ss_dssp -----CCCSCEEEEEC-TTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEE
T ss_pred cCCCCCCccCEEEEec-cCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Confidence 3344456999999864 3332 2478999999999999999999999999999999854 23333 2456889
Q ss_pred EEEEeCc
Q psy5022 279 HSFVKEM 285 (359)
Q Consensus 279 l~v~~~~ 285 (359)
|++.|+.
T Consensus 86 l~v~R~~ 92 (106)
T 4amh_A 86 LKVAKPG 92 (106)
T ss_dssp EEEECCS
T ss_pred EEEEeCC
Confidence 9988864
No 242
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.88 E-value=6.1e-09 Score=79.66 Aligned_cols=78 Identities=22% Similarity=0.322 Sum_probs=59.3
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCC
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANG 275 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~ 275 (359)
...+.+.|.|.. .+|||.+..... ..+++|..|.++|||+++| |++||+|++|||.++.+ +...++ .++
T Consensus 4 ~~~r~v~l~~~~-~~~G~~l~~~~~---~~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 78 (95)
T 3r68_A 4 HQPRVVVIKKGS-NGYGFYLRAGPE---QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGD 78 (95)
T ss_dssp CCCEEEEEECBT-TBCSCEEEEC-----CCSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred CCcEEEEEecCC-CcccEEEEecCC---CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 455778898875 599999985321 2478999999999999999 99999999999998866 333333 355
Q ss_pred eEEEEEEeC
Q psy5022 276 IEDHSFVKE 284 (359)
Q Consensus 276 ~v~l~v~~~ 284 (359)
.+.+.+.+.
T Consensus 79 ~~~~~~~r~ 87 (95)
T 3r68_A 79 QTTLLVLDK 87 (95)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEECC
Confidence 677777654
No 243
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.88 E-value=6.6e-09 Score=90.28 Aligned_cols=82 Identities=22% Similarity=0.276 Sum_probs=67.0
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhcCCCe
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLKANGI 276 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~~~~~ 276 (359)
...++|.+.|..+.+|||++.++.. ...+++|..|.++|||+++| |++||+|++|||.++.+ ++..++.+..
T Consensus 83 ~~~~~v~l~k~~~~~lG~~i~~~~~--~~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~ 159 (192)
T 3k1r_A 83 RKLKEVRLDRLHPEGLGLSVRGGLE--FGCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRTEKT 159 (192)
T ss_dssp SSCEEEEEETTSTTCCCEEEEEEGG--GTEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTSSSE
T ss_pred CceEEEEEEeCCCCceeEEEEcccc--cCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcCCCe
Confidence 4567899999877899999985421 12478999999999999999 99999999999999876 5556666788
Q ss_pred EEEEEEeCcc
Q psy5022 277 EDHSFVKEMD 286 (359)
Q Consensus 277 v~l~v~~~~~ 286 (359)
++|+|.|...
T Consensus 160 v~l~v~r~g~ 169 (192)
T 3k1r_A 160 VSIKVRHIGL 169 (192)
T ss_dssp EEEEEEECCE
T ss_pred EEEEEEECCc
Confidence 9999988644
No 244
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=8.1e-09 Score=82.68 Aligned_cols=83 Identities=24% Similarity=0.306 Sum_probs=63.5
Q ss_pred cccEEEEeeCCCCCccceEEEecCCC---CcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWG---SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK- 272 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g---~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~- 272 (359)
...++|.|.|.. .+|||++.++... ....+++|..|.++|||+++|+|++||+|++|||+++.+ ++..++
T Consensus 16 ~~~~~v~l~r~~-~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~ 94 (120)
T 2eno_A 16 VTEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN 94 (120)
T ss_dssp EEEEEEEEECCS-SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHH
T ss_pred CceEEEEEEECC-CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 456779999986 6999999853211 013578999999999999999999999999999998866 222222
Q ss_pred CCCeEEEEEEeCc
Q psy5022 273 ANGIEDHSFVKEM 285 (359)
Q Consensus 273 ~~~~v~l~v~~~~ 285 (359)
.+..+.|+|.|..
T Consensus 95 ~g~~v~l~v~R~~ 107 (120)
T 2eno_A 95 AGYAVSLRVQHRL 107 (120)
T ss_dssp HCSEEEEEEEEEE
T ss_pred CCCeEEEEEEeCC
Confidence 3567899988753
No 245
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.87 E-value=6.1e-09 Score=81.63 Aligned_cols=81 Identities=28% Similarity=0.425 Sum_probs=61.5
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCC----cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-c
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-K 272 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~----~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~ 272 (359)
..+++.|.|.. .+|||++.+++.|. ...+++|..|.++|||+++|+|++||+|++|||.++.+ .+..+ .
T Consensus 9 ~~~~v~l~k~~-~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 87 (107)
T 1wf8_A 9 ELFPVELEKDE-DGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRN 87 (107)
T ss_dssp EEEEEEEECBT-TBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHH
T ss_pred eEEEEEEEECC-CcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 34568888875 59999998632221 23478999999999999999999999999999999864 22222 2
Q ss_pred CCCeEEEEEEeC
Q psy5022 273 ANGIEDHSFVKE 284 (359)
Q Consensus 273 ~~~~v~l~v~~~ 284 (359)
.+..++|.|.|.
T Consensus 88 ~~~~v~l~v~R~ 99 (107)
T 1wf8_A 88 TKGNVRFVIGRE 99 (107)
T ss_dssp CCSEEEEEEEEE
T ss_pred CCCeEEEEEEeC
Confidence 467899998875
No 246
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.87 E-value=9.3e-09 Score=77.69 Aligned_cols=74 Identities=18% Similarity=0.286 Sum_probs=55.5
Q ss_pred EEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCeEEE
Q psy5022 206 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGIEDH 279 (359)
Q Consensus 206 ~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~v~l 279 (359)
++.+.+ +.+|||.+.++.. ...+++|..|.++|||+++| |++||+|++|||+++.+ ++..++ .+..+.|
T Consensus 6 ~v~~~~--~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l 80 (89)
T 2q3g_A 6 KVVLEG--PAPWGFRLQGGKD--FNVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSL 80 (89)
T ss_dssp EEEEES--SSCCCEEEEEEGG--GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEE
T ss_pred EEEEcC--CCcccEEEECcCC--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEE
Confidence 455554 3689999975321 12367899999999999999 99999999999999985 333333 3567888
Q ss_pred EEEeC
Q psy5022 280 SFVKE 284 (359)
Q Consensus 280 ~v~~~ 284 (359)
.+.|+
T Consensus 81 ~v~R~ 85 (89)
T 2q3g_A 81 GLSRA 85 (89)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 88765
No 247
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.87 E-value=1.4e-08 Score=76.91 Aligned_cols=75 Identities=19% Similarity=0.208 Sum_probs=57.0
Q ss_pred cEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCeE
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGIE 277 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~v 277 (359)
.+.+.|.|... +|||++.++. ...+++|..|.++|||+++| |++||+|++|||.++.+ +...++ ..+.+
T Consensus 4 ~r~v~l~r~~~-g~G~~~~~~~---~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 78 (91)
T 1g9o_A 4 PRLCCLEKGPN-GYGFHLHGEK---GKLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAV 78 (91)
T ss_dssp CEEEEEECBTT-BCCEEEEECT---TCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEE
T ss_pred cEEEEEEeCCC-cccEEEEecC---CCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcE
Confidence 56789999865 8999998542 13578999999999999999 99999999999999876 333333 23445
Q ss_pred EEEEEe
Q psy5022 278 DHSFVK 283 (359)
Q Consensus 278 ~l~v~~ 283 (359)
.+.+.+
T Consensus 79 ~~~~~~ 84 (91)
T 1g9o_A 79 RLLVVD 84 (91)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 554443
No 248
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.87 E-value=1.1e-08 Score=80.04 Aligned_cols=81 Identities=26% Similarity=0.352 Sum_probs=60.6
Q ss_pred ccEEEEeeCCCCCccceEEEecC-CCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCCC
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESG-WGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KANG 275 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~-~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~ 275 (359)
...++.+ |. ..+|||++.++. ......+++|..|.++|||+++|+|++||+|++|||.++.+ .+..+ ..+.
T Consensus 11 ~~~~v~l-~~-~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~ 88 (106)
T 3axa_A 11 EIITVTL-KK-QNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSS 88 (106)
T ss_dssp CEEEEEE-EC-SSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCS
T ss_pred eEEEEEE-CC-CCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 3455777 55 468999998532 11223478999999999999999999999999999999864 33333 3567
Q ss_pred eEEEEEEeCc
Q psy5022 276 IEDHSFVKEM 285 (359)
Q Consensus 276 ~v~l~v~~~~ 285 (359)
.+.|.+.|..
T Consensus 89 ~v~l~v~R~~ 98 (106)
T 3axa_A 89 VVTLEVAKQG 98 (106)
T ss_dssp EEEEEEECCC
T ss_pred eEEEEEEeCC
Confidence 8999988753
No 249
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.87 E-value=8.9e-09 Score=78.38 Aligned_cols=79 Identities=34% Similarity=0.442 Sum_probs=60.2
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCe
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGI 276 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~ 276 (359)
..++|.|.|.. .+|||.+.++.. ...+++|..|.++|||+++|.|++||+|++|||+++.+ ++..++ .+..
T Consensus 5 ~~r~v~l~k~~-~glG~~l~~~~~--~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 81 (93)
T 2dkr_A 5 SSGVVELPKTD-EGLGFNIMGGKE--QNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGS 81 (93)
T ss_dssp CSCEEEEECCT-TCCCEEEECSSS--SSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSE
T ss_pred CCEEEEEEeCC-CCccEEEecccC--CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 45678999885 699999984321 23478999999999999994499999999999999874 333332 3457
Q ss_pred EEEEEEeC
Q psy5022 277 EDHSFVKE 284 (359)
Q Consensus 277 v~l~v~~~ 284 (359)
+.|.+.|.
T Consensus 82 v~l~v~r~ 89 (93)
T 2dkr_A 82 VKLVVRSG 89 (93)
T ss_dssp EEEEECCC
T ss_pred EEEEEEeC
Confidence 88888765
No 250
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.87 E-value=1.6e-08 Score=79.54 Aligned_cols=80 Identities=25% Similarity=0.356 Sum_probs=61.4
Q ss_pred cEEEEeeCCCCCccceEEEecCC----CCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cC
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGW----GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KA 273 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~----g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~ 273 (359)
...+.+.+.. .+|||.+.++.. .....+++|..|.++|||+++| |++||+|++|||.++.+ .+..+ ..
T Consensus 16 ~~~~~l~~~~-~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 93 (110)
T 1x5q_A 16 ELTLTILRQT-GGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGA 93 (110)
T ss_dssp EEEEEEECSS-SSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHSC
T ss_pred eEEEEEecCC-CeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHhhCC
Confidence 3457788874 599999985421 1123578999999999999999 99999999999999877 22222 35
Q ss_pred CCeEEEEEEeCc
Q psy5022 274 NGIEDHSFVKEM 285 (359)
Q Consensus 274 ~~~v~l~v~~~~ 285 (359)
+..+.|.|.|+.
T Consensus 94 g~~v~l~v~R~g 105 (110)
T 1x5q_A 94 GTAVQMRVWRES 105 (110)
T ss_dssp CSEEEEEEEECS
T ss_pred CCeEEEEEEECC
Confidence 778999998864
No 251
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.87 E-value=8.3e-09 Score=80.97 Aligned_cols=83 Identities=27% Similarity=0.322 Sum_probs=62.8
Q ss_pred cccEEEEeeCCCCCccceEEE-----ecCC-CCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHh
Q psy5022 202 ELQKEVVVPKAKGEILGVVIV-----ESGW-GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEF 270 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~-----~~~~-g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~ 270 (359)
...++|.|.|.. .+|||++. ++.. .....+++|..|.++|||+++|+|++||+|++|||.++.+ ++..
T Consensus 8 ~~~~~v~l~k~~-~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 86 (108)
T 1q7x_A 8 GDIFEVELAKND-NSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVET 86 (108)
T ss_dssp SSEEEEEEESSS-CSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHH
T ss_pred CcEEEEEEEECC-CCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 445678999875 59999998 3211 1123578999999999999999999999999999999874 2222
Q ss_pred h-cCCCeEEEEEEeCc
Q psy5022 271 L-KANGIEDHSFVKEM 285 (359)
Q Consensus 271 ~-~~~~~v~l~v~~~~ 285 (359)
+ ..+..++|.+.|+.
T Consensus 87 ~~~~g~~v~l~v~R~~ 102 (108)
T 1q7x_A 87 LRNTGQVVHLLLEKGQ 102 (108)
T ss_dssp HHHTTSEEEEEEECCC
T ss_pred HHcCCCeEEEEEEeCC
Confidence 2 24678999988753
No 252
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.87 E-value=8.9e-09 Score=81.57 Aligned_cols=78 Identities=26% Similarity=0.493 Sum_probs=61.7
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCC-CCCCEEEEECCccHHH-----HHHhhc-CC
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQL-NIGDQIIAVNGVSLVA-----YMEFLK-AN 274 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L-~~GD~Il~Vng~~v~~-----~~~~~~-~~ 274 (359)
...++|.+.|..+++|||.+... ..+++|..|.++|||+++| | ++||+|++|||+++.+ +...++ .+
T Consensus 24 ~~~~~v~l~k~~~~~lG~~i~~~-----~~gv~V~~V~~~spA~~aG-ll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 97 (113)
T 1va8_A 24 ETVKIVRIEKARDIPLGATVRNE-----MDSVIISRIVKGGAAEKSG-LLHEGDEVLEINGIEIRGKDVNEVFDLLSDMH 97 (113)
T ss_dssp EECEEEEEEECTTCCCCEEEEEC-----SSSEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CceEEEEEEeCCCCceeEEEEeC-----CCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 35678999999877999999753 2478999999999999999 6 9999999999999874 333332 34
Q ss_pred CeEEEEEEeCc
Q psy5022 275 GIEDHSFVKEM 285 (359)
Q Consensus 275 ~~v~l~v~~~~ 285 (359)
+.++|+|.|..
T Consensus 98 ~~v~l~v~r~~ 108 (113)
T 1va8_A 98 GTLTFVLIPSS 108 (113)
T ss_dssp EEEEEEEECCC
T ss_pred CeEEEEEEECC
Confidence 56888887653
No 253
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.86 E-value=9.4e-09 Score=81.07 Aligned_cols=79 Identities=24% Similarity=0.359 Sum_probs=61.3
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCe
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGI 276 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~ 276 (359)
..+++.+.|.. ++|||.+.++. ..+++|..|.++|||+++|+|++||+|++|||+++.+ ++..++ .+..
T Consensus 15 ~~~~v~l~~~~-~~lG~~l~~~~----~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~ 89 (111)
T 2dlu_A 15 HVEEVELINDG-SGLGFGIVGGK----TSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNS 89 (111)
T ss_dssp EEEEEEEECCS-SCCCEEEECCS----SSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSE
T ss_pred ceEEEEEEeCC-CccCEEEeccC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 34678888874 68999998432 2478999999999999999999999999999999864 222222 3567
Q ss_pred EEEEEEeCcc
Q psy5022 277 EDHSFVKEMD 286 (359)
Q Consensus 277 v~l~v~~~~~ 286 (359)
+.|.|.|+..
T Consensus 90 v~l~v~R~~~ 99 (111)
T 2dlu_A 90 VRMLVARDPA 99 (111)
T ss_dssp EEEEEEESCT
T ss_pred EEEEEEeCCC
Confidence 8999887643
No 254
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.86 E-value=4e-09 Score=81.75 Aligned_cols=80 Identities=26% Similarity=0.238 Sum_probs=62.4
Q ss_pred cccEEEEeeCC-CCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhcCCC
Q psy5022 202 ELQKEVVVPKA-KGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLKANG 275 (359)
Q Consensus 202 ~~~~~v~l~r~-~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~~~~ 275 (359)
...+++.+.|. ...+|||.+.+... ...+++|..|.++|||+++| |++||+|++|||+++.+ ++..++.+.
T Consensus 7 ~~~~~v~l~~~~~~~~lG~~~~~~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~~ 83 (101)
T 1uez_A 7 GEVRLVSLRRAKAHEGLGFSIRGGSE--HGVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKGSK 83 (101)
T ss_dssp CCCEEECCCCCCTTTCSSEEEEECTT--TTCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSSSS
T ss_pred CccEEEEEEECCCCCcccEEEeCCCC--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcCCC
Confidence 45567888774 35689999985421 12478999999999999999 99999999999999876 555556666
Q ss_pred eEEEEEEeC
Q psy5022 276 IEDHSFVKE 284 (359)
Q Consensus 276 ~v~l~v~~~ 284 (359)
.+.|+|.|+
T Consensus 84 ~v~l~v~R~ 92 (101)
T 1uez_A 84 KLVLSVYSA 92 (101)
T ss_dssp SCCEEECCC
T ss_pred eEEEEEEEC
Confidence 788888765
No 255
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.86 E-value=1.2e-08 Score=82.17 Aligned_cols=83 Identities=23% Similarity=0.330 Sum_probs=62.2
Q ss_pred cccEEEEeeCCCCCccceEEEecC-CCC------cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHH
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESG-WGS------MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YME 269 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~-~g~------~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~ 269 (359)
...+++.+.|.....||+.+.+.. .+. ...+++|..|.++|||+++|+|++||+|++|||.++.+ +..
T Consensus 23 ~~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~ 102 (123)
T 2iwq_A 23 MQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVE 102 (123)
T ss_dssp CCCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 445778898887779999997531 111 12478999999999999999999999999999999865 333
Q ss_pred hhc-CCCeEEEEEEeC
Q psy5022 270 FLK-ANGIEDHSFVKE 284 (359)
Q Consensus 270 ~~~-~~~~v~l~v~~~ 284 (359)
.++ .++.++|+|.|.
T Consensus 103 ~l~~~~~~v~l~v~r~ 118 (123)
T 2iwq_A 103 AIRKAGNPVVFMVQSI 118 (123)
T ss_dssp HHHHCCSSEEEEEECC
T ss_pred HHHcCCCeEEEEEEEC
Confidence 332 244788888764
No 256
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.86 E-value=1.7e-09 Score=87.37 Aligned_cols=64 Identities=17% Similarity=0.228 Sum_probs=54.9
Q ss_pred eeccccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 290 VLNSQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 290 ~~~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+.+...++||.+.+. ..+.+|..|.++|||+++| |++||+|++|||+++.+.+|++++++|+..
T Consensus 33 l~k~~~glG~~i~~~---~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~ 97 (126)
T 1wif_A 33 LTVGNLGLGLVVIQN---GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNI 97 (126)
T ss_dssp EECCTTCCCCCEEEE---TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSC
T ss_pred EecCCceEeEEEEcC---CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Confidence 345667889988742 2356899999999999999 999999999999999988999999999974
No 257
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.85 E-value=4.8e-09 Score=83.03 Aligned_cols=81 Identities=27% Similarity=0.388 Sum_probs=61.4
Q ss_pred cEEEEeeCCCCCccceEEEecCCCC----cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cC
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KA 273 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~----~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~ 273 (359)
.++|.|.|.. .+|||++.+...|. ...+++|..|.++|||+++|+|++||+|++|||.++.+ .+..+ ..
T Consensus 5 ~~~v~l~k~~-~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 83 (113)
T 2g5m_B 5 LFPVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT 83 (113)
T ss_dssp EEEEECCCCS-SCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHS
T ss_pred EEEEEEEeCC-CCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 4568888875 59999998632222 23478999999999999999999999999999999864 22222 24
Q ss_pred CCeEEEEEEeCc
Q psy5022 274 NGIEDHSFVKEM 285 (359)
Q Consensus 274 ~~~v~l~v~~~~ 285 (359)
+..++|.+.|+.
T Consensus 84 g~~v~l~v~R~~ 95 (113)
T 2g5m_B 84 KGRVRFMIGRER 95 (113)
T ss_dssp CSSCEEEEEECC
T ss_pred CCeEEEEEEeCC
Confidence 667899988754
No 258
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.85 E-value=9.5e-09 Score=82.56 Aligned_cols=83 Identities=20% Similarity=0.330 Sum_probs=63.9
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCC--cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH--------HHHhhc
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGS--MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--------YMEFLK 272 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~--~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--------~~~~~~ 272 (359)
..++|.|.|....+|||++.++.... ....++|..|.++|||+++|+|++||+|++|||+++.+ +++...
T Consensus 15 ~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 94 (122)
T 1v5q_A 15 ETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSS 94 (122)
T ss_dssp EEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHT
T ss_pred eeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 45678898887679999998542111 12457999999999999999999999999999998844 344444
Q ss_pred CCCeEEEEEEeCc
Q psy5022 273 ANGIEDHSFVKEM 285 (359)
Q Consensus 273 ~~~~v~l~v~~~~ 285 (359)
.+..++|.|.|+.
T Consensus 95 ~g~~v~l~v~R~~ 107 (122)
T 1v5q_A 95 ITSKVTLEIEFDV 107 (122)
T ss_dssp TTTCEEEEEEEEC
T ss_pred CCCeEEEEEEECC
Confidence 3668999998764
No 259
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.85 E-value=7.6e-09 Score=82.70 Aligned_cols=81 Identities=17% Similarity=0.217 Sum_probs=61.8
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhc--CCCCCCCEEEEECCccHHH--------HHHhh
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARC--GQLNIGDQIIAVNGVSLVA--------YMEFL 271 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~--G~L~~GD~Il~Vng~~v~~--------~~~~~ 271 (359)
...++|.+.|...+.|||.+.++.. ...+++|..|.++|||+++ | |++||+|++|||.++.+ +++..
T Consensus 14 ~~~~~v~l~k~~~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~a~gG-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~ 90 (119)
T 2cs5_A 14 DNLVLIRMKPDENGRFGFNVKGGYD--QKMPVIVSRVAPGTPADLCVPR-LNEGDQVVLINGRDIAEHTHDQVVLFIKAS 90 (119)
T ss_dssp SCCEEEEECCCSSSCCSEEEEEEGG--GTEEEEEEEECSSSTTTSSSSC-CCTTCEEEEETTBCTTSSCHHHHHHHHHHH
T ss_pred CCeEEEEEEeCCCCCcCEEEecccC--CCCCeEEEEECCCCHHHHhhcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 3457799999877789999985421 1236899999999999999 7 99999999999999865 23333
Q ss_pred cC--CCeEEEEEEeCc
Q psy5022 272 KA--NGIEDHSFVKEM 285 (359)
Q Consensus 272 ~~--~~~v~l~v~~~~ 285 (359)
.. ...+.|+|.|+.
T Consensus 91 ~~~~~~~v~l~v~R~~ 106 (119)
T 2cs5_A 91 CERHSGELMLLVRPNA 106 (119)
T ss_dssp HHCCSSCEEEEEECCC
T ss_pred cccCCCEEEEEEEccc
Confidence 22 246899988764
No 260
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.84 E-value=6.1e-09 Score=81.14 Aligned_cols=82 Identities=18% Similarity=0.251 Sum_probs=61.9
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCe
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGI 276 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~ 276 (359)
..+++.|.|.. .+|||.+..+..-....+++|..|.++|||+++|+|++||+|++|||.++.+ ++..++ .+..
T Consensus 11 ~~~~v~l~~~~-~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 89 (104)
T 2djt_A 11 GHFSVELVRGY-AGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGPQ 89 (104)
T ss_dssp CCEEEEEECCS-SSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTCSE
T ss_pred ceEEEEEEeCC-CCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 45678898886 5899999853210013468999999999999999999999999999999865 333332 4678
Q ss_pred EEEEEEeCc
Q psy5022 277 EDHSFVKEM 285 (359)
Q Consensus 277 v~l~v~~~~ 285 (359)
+.|+|.|+.
T Consensus 90 v~l~v~R~g 98 (104)
T 2djt_A 90 LHLVIRRPL 98 (104)
T ss_dssp EEEEECCCC
T ss_pred EEEEEEECC
Confidence 889887653
No 261
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.84 E-value=1.3e-08 Score=81.19 Aligned_cols=79 Identities=27% Similarity=0.285 Sum_probs=62.6
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCCC
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KANG 275 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~ 275 (359)
...++|.|.|.. .+|||.+.+.. ...+++|..|.++|||+++|+|++||+|++|||.++.+ .+..+ ..+.
T Consensus 13 ~~~~~v~l~k~~-~glG~~l~~~~---~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 88 (119)
T 1tp5_A 13 REPRRIVIHRGS-TGLGFNIVGGE---DGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQ 88 (119)
T ss_dssp CSCEEEEEECTT-SCCCEEEEECG---GGCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCS
T ss_pred CccEEEEEEECC-CCccEEEecCC---CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 456789999986 47999998532 13578999999999999999999999999999999876 22222 3566
Q ss_pred eEEEEEEeC
Q psy5022 276 IEDHSFVKE 284 (359)
Q Consensus 276 ~v~l~v~~~ 284 (359)
.+.|.+.+.
T Consensus 89 ~v~l~v~r~ 97 (119)
T 1tp5_A 89 TVTIIAQYK 97 (119)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEEC
Confidence 788988865
No 262
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.84 E-value=6.3e-09 Score=83.13 Aligned_cols=64 Identities=22% Similarity=0.262 Sum_probs=54.5
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.+... ..+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 22 k~~~glG~~l~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 86 (119)
T 1tp5_A 22 RGSTGLGFNIVGGED-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA 86 (119)
T ss_dssp CTTSCCCEEEEECGG-GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred ECCCCccEEEecCCC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 445679999986532 2478999999999999999 999999999999999999998888888753
No 263
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.84 E-value=7.6e-09 Score=81.71 Aligned_cols=64 Identities=22% Similarity=0.357 Sum_probs=55.3
Q ss_pred ccccCcEEecccccccCcEEEEEcCCChhhcCCC-CCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 294 QEIFGDELQMFAKKELQKEICSLLRGGIAERGGV-RVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL-~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
..++||.+.... ...+.+|.+|.++|||+++|| ++||+|++|||.++.+++++++.++|+...|
T Consensus 12 ~~glG~~~~~~~-~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g 76 (112)
T 1qau_A 12 VGGLGFLVKERV-SKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIAS 76 (112)
T ss_dssp TTBTSEEEEECS-SSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCS
T ss_pred CCceeEEEEecC-CCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 467899987542 233679999999999999997 9999999999999999999999999987654
No 264
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.84 E-value=1.7e-08 Score=77.17 Aligned_cols=75 Identities=27% Similarity=0.339 Sum_probs=56.4
Q ss_pred EEEeeCCCCCccceEEEecCC------CCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cC
Q psy5022 206 EVVVPKAKGEILGVVIVESGW------GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KA 273 (359)
Q Consensus 206 ~v~l~r~~~~~lG~~i~~~~~------g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~ 273 (359)
+|.+.|. .+|||+|.++.- .....+++|..|.++|||++ | |++||+|++|||.++.+ .+..+ ..
T Consensus 6 ~v~l~~~--~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (95)
T 1mfg_A 6 RVRVEKD--PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTF 81 (95)
T ss_dssp EEEEECS--SSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHHHC
T ss_pred EEEECCC--CCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhhcC
Confidence 4666665 379999986421 11235789999999999999 8 99999999999999865 22222 34
Q ss_pred CCeEEEEEEeC
Q psy5022 274 NGIEDHSFVKE 284 (359)
Q Consensus 274 ~~~v~l~v~~~ 284 (359)
+..+.|.+.|+
T Consensus 82 ~~~v~l~v~R~ 92 (95)
T 1mfg_A 82 QNTVELIIVRE 92 (95)
T ss_dssp CSEEEEEEEEE
T ss_pred CCeEEEEEEeC
Confidence 67888988775
No 265
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.84 E-value=9.4e-09 Score=83.59 Aligned_cols=83 Identities=18% Similarity=0.243 Sum_probs=62.6
Q ss_pred ccccEEEEeeCCCCCccceEEEecCCCC--cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhcC
Q psy5022 201 KELQKEVVVPKAKGEILGVVIVESGWGS--MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLKA 273 (359)
Q Consensus 201 ~~~~~~v~l~r~~~~~lG~~i~~~~~g~--~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~~ 273 (359)
....++|.|.|.. .+|||+|.++. +. ...+++|..|.+++||+++|.|++||+|++|||+++.+ ++..++.
T Consensus 27 ~~~~~~v~l~k~~-~glG~~i~gg~-~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 104 (130)
T 1i16_A 27 EATVCTVTLEKMS-AGLGFSLEGGK-GSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKA 104 (130)
T ss_dssp SEEEEEEEEETTS-SSTTEEEECCC-CCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHT
T ss_pred CCcEEEEEEEcCC-CccCEEEecCc-CCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3456779999874 58999998542 21 12468999999999999993499999999999999876 4444443
Q ss_pred --CCeEEEEEEeCc
Q psy5022 274 --NGIEDHSFVKEM 285 (359)
Q Consensus 274 --~~~v~l~v~~~~ 285 (359)
+..+.|+|.|..
T Consensus 105 ~~~~~v~l~v~r~~ 118 (130)
T 1i16_A 105 LPDGPVTIVIRRKS 118 (130)
T ss_dssp SCSSEEEEEEEEES
T ss_pred CCCceEEEEEEeCC
Confidence 346888887753
No 266
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.84 E-value=1.2e-08 Score=76.93 Aligned_cols=75 Identities=19% Similarity=0.152 Sum_probs=55.2
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh---cCC
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL---KAN 274 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~---~~~ 274 (359)
..+++.|.|.. .+|||++..... ..+++|..+ ++|||+ +| |++||+|++|||.++.+ +...+ ..+
T Consensus 3 ~~~~v~l~k~~-~g~G~~~~~~~~---~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g 75 (88)
T 3bpu_A 3 ELITVHIVKGP-MGFGFTIADSPG---GGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESPKG 75 (88)
T ss_dssp EEEEEEEECBT-TBSSCEEEECTT---SSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSCTT
T ss_pred cEEEEEEEcCC-CceeEEEEecCC---CCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCC
Confidence 34678899975 589999985321 246788776 999999 89 99999999999998865 33333 346
Q ss_pred CeEEEEEEeC
Q psy5022 275 GIEDHSFVKE 284 (359)
Q Consensus 275 ~~v~l~v~~~ 284 (359)
..+.|.+.|+
T Consensus 76 ~~v~l~v~R~ 85 (88)
T 3bpu_A 76 SEVTLLVQRQ 85 (88)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEeC
Confidence 7889988775
No 267
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.84 E-value=1.2e-08 Score=82.66 Aligned_cols=84 Identities=25% Similarity=0.380 Sum_probs=63.8
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCC---cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGS---MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK- 272 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~---~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~- 272 (359)
...++|.|.|....+|||++.++.... ...+++|..|.++|||+++|+|++||+|++|||.++.+ +...++
T Consensus 14 ~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 93 (129)
T 2dmz_A 14 FETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN 93 (129)
T ss_dssp EEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH
T ss_pred CcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 345678887766779999998632110 23578999999999999999999999999999999876 333222
Q ss_pred CCCeEEEEEEeCc
Q psy5022 273 ANGIEDHSFVKEM 285 (359)
Q Consensus 273 ~~~~v~l~v~~~~ 285 (359)
.+..+.|.|.|+.
T Consensus 94 ~~~~v~l~v~R~~ 106 (129)
T 2dmz_A 94 AGQVVHLTLVRRK 106 (129)
T ss_dssp CCSSEEEEEEEES
T ss_pred CCCeEEEEEEeCC
Confidence 5678999988754
No 268
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.84 E-value=1.2e-09 Score=88.31 Aligned_cols=47 Identities=28% Similarity=0.448 Sum_probs=44.2
Q ss_pred CcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 310 QKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 310 ~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+.+|..|.++|||+++||++||+|++|||+++.++++++++++|+.+
T Consensus 62 gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 108 (126)
T 2yuy_A 62 TIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNS 108 (126)
T ss_dssp CCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHHHHHHHTC
T ss_pred CEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 46899999999999999999999999999999999999999999864
No 269
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.83 E-value=7.6e-09 Score=89.84 Aligned_cols=62 Identities=21% Similarity=0.210 Sum_probs=54.6
Q ss_pred cccCcEEecccc--------cccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 295 EIFGDELQMFAK--------KELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 295 ~~~G~~~~~~~~--------~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
.+|||.+.++.. ...+.+|.+|.++|||++ ||++||+|++|||+++.+++|.+++.+++...
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 71 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ 71 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 578999998642 234789999999999999 99999999999999999999999999998753
No 270
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.83 E-value=8.3e-09 Score=83.68 Aligned_cols=86 Identities=22% Similarity=0.342 Sum_probs=64.4
Q ss_pred cccccEEEEeeCCC-CCccceEEEecC------CCC-cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----
Q psy5022 200 KKELQKEVVVPKAK-GEILGVVIVESG------WGS-MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA----- 266 (359)
Q Consensus 200 ~~~~~~~v~l~r~~-~~~lG~~i~~~~------~g~-~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~----- 266 (359)
.+...++|.+.|.. +++|||++.++. +|. ..++++|..|.++|||+++|+|++||+|++|||.++.+
T Consensus 26 ~~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~ 105 (128)
T 1nf3_C 26 LPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQ 105 (128)
T ss_dssp SCTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHH
T ss_pred CCCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH
Confidence 34566789999984 579999997532 221 12468999999999999999889999999999999954
Q ss_pred HHHhh-cCCCeEEEEEEeCc
Q psy5022 267 YMEFL-KANGIEDHSFVKEM 285 (359)
Q Consensus 267 ~~~~~-~~~~~v~l~v~~~~ 285 (359)
+...+ ..+..++|++.|..
T Consensus 106 ~~~~l~~~~~~v~l~v~r~~ 125 (128)
T 1nf3_C 106 VTDMMIANSRNLIITVRPAN 125 (128)
T ss_dssp HHHHHHHTTTSEEEEEECCC
T ss_pred HHHHHHcCCCeEEEEEEECC
Confidence 22222 24556999888753
No 271
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.83 E-value=2.4e-09 Score=85.10 Aligned_cols=60 Identities=23% Similarity=0.401 Sum_probs=52.0
Q ss_pred ccCcEEeccccc-ccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 296 IFGDELQMFAKK-ELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 296 ~~G~~~~~~~~~-~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
.|||.+...... ..+.+|..|.++|||+++||++||+|++|||+++.+++++++.++|+.
T Consensus 30 ~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~ 90 (114)
T 2d8i_A 30 TYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ 90 (114)
T ss_dssp CCCCEEEEEEETTEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS
T ss_pred ccCEEEEecCcCCcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC
Confidence 689998864322 136789999999999999999999999999999999999999998874
No 272
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.83 E-value=1.4e-08 Score=81.14 Aligned_cols=79 Identities=23% Similarity=0.249 Sum_probs=59.3
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH--------HHHhhc--
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--------YMEFLK-- 272 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--------~~~~~~-- 272 (359)
..+.+.+.+. + +|||+|.++ .......++|..|.++|||+++|.|++||+|++|||.++.+ +++...
T Consensus 18 ~~~~~~~~~~-~-glG~~i~gg-~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~ 94 (118)
T 1v6b_A 18 DVRLLRIKKE-G-SLDLALEGG-VDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQ 94 (118)
T ss_dssp CEEEEEEESC-S-CCCCEEEEB-TTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHH
T ss_pred eEEEEEECCC-C-ccCEEEEcc-cCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhc
Confidence 3456667666 3 799999853 33333458999999999999993399999999999999865 344432
Q ss_pred CCCeEEEEEEeC
Q psy5022 273 ANGIEDHSFVKE 284 (359)
Q Consensus 273 ~~~~v~l~v~~~ 284 (359)
.+..++|+|.|.
T Consensus 95 ~g~~v~l~v~r~ 106 (118)
T 1v6b_A 95 GGDWIDLVVAVC 106 (118)
T ss_dssp TCSEEEEEEECC
T ss_pred CCCeEEEEEEeC
Confidence 267899999874
No 273
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.82 E-value=8.1e-09 Score=76.29 Aligned_cols=59 Identities=19% Similarity=0.299 Sum_probs=51.4
Q ss_pred cccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 293 SQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
....|||.+.. +.+|.+|.++|||+++| |++||+|++|||+++.++++.++.++|++..
T Consensus 11 ~~~~~g~~~~~------gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 70 (81)
T 2rcz_A 11 KNEEYGLRLAS------HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK 70 (81)
T ss_dssp TTCCCCEEEEE------EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTST
T ss_pred CCCCCCEEEeC------CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCC
Confidence 34567887752 67899999999999999 9999999999999999889999999998643
No 274
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.82 E-value=1.5e-08 Score=80.30 Aligned_cols=79 Identities=30% Similarity=0.434 Sum_probs=61.8
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhcCCCeE
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLKANGIE 277 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~~~~~v 277 (359)
..+++.+.+....+|||.+.++. ....+++|..|.+++||+++| |++||+|++|||.++.+ ++..++....+
T Consensus 15 ~~~~v~~~~~~~~~lG~~l~~~~--~~~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~v 91 (114)
T 1x5n_A 15 KEKKVFISLVGSRGLGCSISSGP--IQKPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSSRSL 91 (114)
T ss_dssp SSEEEEECCCSSCCCCEEEEECC--SSSCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHCSSE
T ss_pred CcEEEEEEEcCCCceeEEEeecC--CCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCeE
Confidence 34678887777789999998542 123478999999999999999 99999999999999876 34444444578
Q ss_pred EEEEEeC
Q psy5022 278 DHSFVKE 284 (359)
Q Consensus 278 ~l~v~~~ 284 (359)
.|.+.|+
T Consensus 92 ~l~v~r~ 98 (114)
T 1x5n_A 92 TISIVAA 98 (114)
T ss_dssp EEEECSS
T ss_pred EEEEEcC
Confidence 8888765
No 275
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.82 E-value=8.2e-09 Score=89.38 Aligned_cols=66 Identities=23% Similarity=0.295 Sum_probs=57.2
Q ss_pred eccccccCcEEeccccc-----ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 291 LNSQEIFGDELQMFAKK-----ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~-----~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
.+...+|||.+.++... ..+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 12 ~~~~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 83 (196)
T 3gsl_A 12 ERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEA 83 (196)
T ss_dssp ECBTTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred EECCCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 35567899999976543 3467999999999999999 999999999999999999999999888754
No 276
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.82 E-value=1e-08 Score=77.65 Aligned_cols=73 Identities=19% Similarity=0.299 Sum_probs=55.1
Q ss_pred EEEeeCCCCC--ccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccH--HH------HHHhhcCCC
Q psy5022 206 EVVVPKAKGE--ILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL--VA------YMEFLKANG 275 (359)
Q Consensus 206 ~v~l~r~~~~--~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v--~~------~~~~~~~~~ 275 (359)
.+.+.+..+. .||+.+... ..+++|..|.++|||+++| |++||+|++|||.++ .+ ++.....+.
T Consensus 6 ~~~~~~~~~~~~~lG~~~~~~-----~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~ 79 (90)
T 2eaq_A 6 RISINQTPGKSLDFGFTIKWD-----IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETG 79 (90)
T ss_dssp EEEEECCTTCSSCCSEEEEEE-----TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCCCCcccEEEEec-----CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCC
Confidence 3555555443 799988632 2478999999999999999 999999999999998 33 344334466
Q ss_pred eEEEEEEeC
Q psy5022 276 IEDHSFVKE 284 (359)
Q Consensus 276 ~v~l~v~~~ 284 (359)
.+.|++.|+
T Consensus 80 ~v~l~v~R~ 88 (90)
T 2eaq_A 80 HLVMDVRRY 88 (90)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEeC
Confidence 888988764
No 277
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.82 E-value=2.8e-08 Score=78.23 Aligned_cols=80 Identities=28% Similarity=0.395 Sum_probs=60.1
Q ss_pred EEEEeeCCCCCccceEEEecCCC-CcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----H---HHhhcCCC
Q psy5022 205 KEVVVPKAKGEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----Y---MEFLKANG 275 (359)
Q Consensus 205 ~~v~l~r~~~~~lG~~i~~~~~g-~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~---~~~~~~~~ 275 (359)
..+.+.+.. .+|||++...... ....+++|..|.++|||+++|+|++||+|++|||.++.+ + ++....+.
T Consensus 13 ~~~~l~~~~-~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~ 91 (111)
T 2koj_A 13 LNIQLKKGT-EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEG 91 (111)
T ss_dssp EEEEEECBT-TBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSS
T ss_pred EEEEEEECC-CccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 456777764 5899999854211 112478999999999999999999999999999999854 3 33333467
Q ss_pred eEEEEEEeCc
Q psy5022 276 IEDHSFVKEM 285 (359)
Q Consensus 276 ~v~l~v~~~~ 285 (359)
.+.|.|.|+.
T Consensus 92 ~v~l~v~R~~ 101 (111)
T 2koj_A 92 TVSLLVFRQE 101 (111)
T ss_dssp EEEEEEEECC
T ss_pred eEEEEEEeCC
Confidence 8999988753
No 278
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.82 E-value=1.2e-08 Score=79.82 Aligned_cols=60 Identities=28% Similarity=0.299 Sum_probs=51.3
Q ss_pred ccccCcEEeccccc------ccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Q psy5022 294 QEIFGDELQMFAKK------ELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLA 354 (359)
Q Consensus 294 ~~~~G~~~~~~~~~------~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~ 354 (359)
..+|||.+.++... ..+.+|.+|.++|||+ +||++||+|++|||+++.++++.+.+..++
T Consensus 18 ~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~~ 83 (107)
T 2h2b_A 18 GFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLR 83 (107)
T ss_dssp TTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHhh
Confidence 47899999865432 3467999999999999 999999999999999999998888777666
No 279
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.82 E-value=1.5e-08 Score=80.79 Aligned_cols=81 Identities=21% Similarity=0.265 Sum_probs=61.1
Q ss_pred ccEEEEeeCCCCCccceEEEecCCC----CcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-c
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWG----SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-K 272 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g----~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~ 272 (359)
..++|.|.|..+.+|||++.++... ....+++|..|.++|||+ +| |++||+|++|||+++.+ .+..+ .
T Consensus 14 ~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~l~~ 91 (117)
T 2csj_A 14 EQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQLRK 91 (117)
T ss_dssp EEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHHHH
T ss_pred eEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHHHhc
Confidence 3467889998767999999854211 013468999999999997 88 99999999999999865 22222 2
Q ss_pred CCCeEEEEEEeCc
Q psy5022 273 ANGIEDHSFVKEM 285 (359)
Q Consensus 273 ~~~~v~l~v~~~~ 285 (359)
.+..+.|.|.|..
T Consensus 92 ~~~~v~l~v~R~~ 104 (117)
T 2csj_A 92 SGKIAAIVVKRPR 104 (117)
T ss_dssp SCSEEEEEEEEEE
T ss_pred CCCeEEEEEEECC
Confidence 4678999988753
No 280
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=1.9e-08 Score=78.13 Aligned_cols=82 Identities=23% Similarity=0.359 Sum_probs=58.7
Q ss_pred cEEEEeeCCCCCccceEEEecC-CCC------cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh
Q psy5022 204 QKEVVVPKAKGEILGVVIVESG-WGS------MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL 271 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~-~g~------~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~ 271 (359)
.+++.+.|.....||+.+.+.. .+. ...+++|..|.++|||+++|+|++||+|++|||.++.+ +...+
T Consensus 5 p~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l 84 (103)
T 2fcf_A 5 PRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAI 84 (103)
T ss_dssp CEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4678898887678999997531 111 11478999999999999999999999999999999865 33333
Q ss_pred c-CCCeEEEEEEeCc
Q psy5022 272 K-ANGIEDHSFVKEM 285 (359)
Q Consensus 272 ~-~~~~v~l~v~~~~ 285 (359)
+ .++.++|.+.|..
T Consensus 85 ~~~~~~v~l~v~r~~ 99 (103)
T 2fcf_A 85 RKAGNPVVFMVQSII 99 (103)
T ss_dssp HTCCSSEEEEEECCC
T ss_pred HhCCCcEEEEEEECC
Confidence 2 2347888887653
No 281
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.82 E-value=1.6e-08 Score=76.10 Aligned_cols=76 Identities=18% Similarity=0.292 Sum_probs=56.7
Q ss_pred cEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCeE
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGIE 277 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~v 277 (359)
..+|.+ +. +.+|||++.++.. ...+++|..|.++|||+++| |++||+|++|||.++.+ +...++ .+..+
T Consensus 4 ~~~v~l-~~-~~~~G~~l~~g~~--~~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 78 (88)
T 2uzc_A 4 NYSVSL-VG-PAPWGFRLQGGKD--FNMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSL 78 (88)
T ss_dssp EEEEEE-ES-SSCCCEEEEEEGG--GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred EEEEEE-cC-CCcccEEEECcCC--CCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 345677 33 3589999985321 12368999999999999999 99999999999998866 333332 36678
Q ss_pred EEEEEeC
Q psy5022 278 DHSFVKE 284 (359)
Q Consensus 278 ~l~v~~~ 284 (359)
.|++.|+
T Consensus 79 ~l~v~R~ 85 (88)
T 2uzc_A 79 NMTLQRE 85 (88)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 8888775
No 282
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.81 E-value=1.2e-08 Score=89.07 Aligned_cols=65 Identities=25% Similarity=0.384 Sum_probs=57.8
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERG-GVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~-gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.++.....+.+|..|.++|||+++ ||++||+|++|||+++.+++|.+++.+++..
T Consensus 16 ~~~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (200)
T 2qt5_A 16 KEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNV 81 (200)
T ss_dssp CTTCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTC
T ss_pred CCCCCCCEEEecccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4567899999876655567899999999999998 9999999999999999999999999888754
No 283
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.81 E-value=1.4e-08 Score=78.03 Aligned_cols=62 Identities=23% Similarity=0.318 Sum_probs=51.9
Q ss_pred eccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 291 LNSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 291 ~~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
.+...+|||.+... ..+.+|..|.++ |+++||++||+|++|||+++.+++|++++++|+..+
T Consensus 17 ~~~~~g~G~~i~~~---~~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 78 (96)
T 1ujv_A 17 VKGAQGFGFTIADS---PTGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCP 78 (96)
T ss_dssp ECCSSSSSEEEEEE---TTEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred EeCCCceeEEEEcC---CCCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 34557899999642 225789999883 778999999999999999999999999999999864
No 284
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.81 E-value=1.1e-08 Score=83.06 Aligned_cols=79 Identities=19% Similarity=0.234 Sum_probs=61.6
Q ss_pred cEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH--------HHHhhcCCC
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--------YMEFLKANG 275 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--------~~~~~~~~~ 275 (359)
..++.|.|.. .+|||++.++.. ...+++|..|.++|||+++|+|++||+|++|||.++.+ +++....+.
T Consensus 19 ~~~v~l~~~~-~g~G~~i~g~~~--~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~ 95 (129)
T 2kpk_A 19 FIHTKLRKSS-RGFGFTVVGGDE--PDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGA 95 (129)
T ss_dssp EEEEEEEECS-SCCSEEEEEEEE--TTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTE
T ss_pred EEEEEEEECC-CcccEEEeCccC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 4467888874 589999985321 12368999999999999999999999999999999864 344444466
Q ss_pred eEEEEEEeCc
Q psy5022 276 IEDHSFVKEM 285 (359)
Q Consensus 276 ~v~l~v~~~~ 285 (359)
.++|.|.|..
T Consensus 96 ~v~l~v~R~~ 105 (129)
T 2kpk_A 96 SVDLELCRGY 105 (129)
T ss_dssp EEEEEEEECS
T ss_pred eEEEEEEeCC
Confidence 7999998764
No 285
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.80 E-value=2.2e-08 Score=78.42 Aligned_cols=83 Identities=22% Similarity=0.269 Sum_probs=60.9
Q ss_pred ccEEEEeeC-CCCCccceEEEecCCCC---cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-
Q psy5022 203 LQKEVVVPK-AKGEILGVVIVESGWGS---MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK- 272 (359)
Q Consensus 203 ~~~~v~l~r-~~~~~lG~~i~~~~~g~---~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~- 272 (359)
..+++.+.| ....+|||++.++.... ...+++|..|.++|||+++|+|++||+|++|||.++.+ ++..++
T Consensus 12 ~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 91 (108)
T 2jre_A 12 SLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRN 91 (108)
T ss_dssp EEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHH
T ss_pred EEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 345677853 44579999998532111 22478999999999999999999999999999999865 332222
Q ss_pred CCCeEEEEEEeCc
Q psy5022 273 ANGIEDHSFVKEM 285 (359)
Q Consensus 273 ~~~~v~l~v~~~~ 285 (359)
.+..+.|.+.|..
T Consensus 92 ~g~~v~l~v~R~~ 104 (108)
T 2jre_A 92 AGNPVRLLLIRRL 104 (108)
T ss_dssp HCSEEEEEEEECC
T ss_pred CCCeEEEEEEeCC
Confidence 4567889888753
No 286
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.79 E-value=1.5e-08 Score=76.94 Aligned_cols=57 Identities=19% Similarity=0.314 Sum_probs=50.5
Q ss_pred ccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 294 QEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
...||+.+. .+.+|.+|.++|||+++| |++||+|++|||+++.++++.++.++|++.
T Consensus 14 ~~~~g~~~~------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 71 (92)
T 3cyy_A 14 NEEYGLRLA------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERS 71 (92)
T ss_dssp TSCCCEEEE------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred CCCCCEEEe------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 356788765 268899999999999999 999999999999999988999999999864
No 287
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.79 E-value=7.4e-09 Score=82.31 Aligned_cols=84 Identities=30% Similarity=0.364 Sum_probs=62.7
Q ss_pred cccccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-C
Q psy5022 200 KKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-A 273 (359)
Q Consensus 200 ~~~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~ 273 (359)
.+...+.+.+.+.. .+|||.+.++. .....+++|..|.++|||+++|+|++||+|++|||.++.+ ++..++ .
T Consensus 14 ~~~~~~~v~l~~~~-~glG~~l~~~~-~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 91 (116)
T 2dm8_A 14 VPGQEMIIEISKGR-SGLGLSIVGGK-DTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQT 91 (116)
T ss_dssp CTTSCEEEEEECCS-SCCCCCCBCCT-TSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTC
T ss_pred CCCCEEEEEEEECC-CcccEEEeCCC-CCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 34445678888875 58999987432 1112478999999999999999999999999999999865 333333 3
Q ss_pred CCeEEEEEEeCc
Q psy5022 274 NGIEDHSFVKEM 285 (359)
Q Consensus 274 ~~~v~l~v~~~~ 285 (359)
+..+.|.|.|+.
T Consensus 92 ~~~v~l~v~R~~ 103 (116)
T 2dm8_A 92 PQKVRLVVYRDE 103 (116)
T ss_dssp CSEEEEEEECCS
T ss_pred CCeEEEEEEeCC
Confidence 467889888753
No 288
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.79 E-value=1.5e-08 Score=77.94 Aligned_cols=76 Identities=20% Similarity=0.290 Sum_probs=56.3
Q ss_pred cEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc--CCCe
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK--ANGI 276 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~--~~~~ 276 (359)
.+.+.+.|.. .+|||.+.... ...+++|..|.++|||+++| |++||+|++|||.++.+ +...++ .+..
T Consensus 10 ~~~~~l~~~~-~g~G~~~~~~~---~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 84 (98)
T 2jxo_A 10 PRLCTMKKGP-SGYGFNLHSDK---SKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDET 84 (98)
T ss_dssp CEEEEEECTT-TCCCEEEECCC---SSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred cEEEEEEeCC-CcccEEEEecC---CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcE
Confidence 4567888875 58999997432 23478999999999999999 99999999999998865 323222 3445
Q ss_pred EEEEEEeC
Q psy5022 277 EDHSFVKE 284 (359)
Q Consensus 277 v~l~v~~~ 284 (359)
+.+.+.|+
T Consensus 85 ~~l~v~R~ 92 (98)
T 2jxo_A 85 KLLVVDRE 92 (98)
T ss_dssp EEEECCHH
T ss_pred EEEEEECC
Confidence 55666553
No 289
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.79 E-value=1.1e-08 Score=89.57 Aligned_cols=66 Identities=14% Similarity=0.119 Sum_probs=56.7
Q ss_pred ccccccCcEEecccccc--cCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCC--CCHHHHHHHHHhcc
Q psy5022 292 NSQEIFGDELQMFAKKE--LQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVA--VPHEKIVNLLATSV 357 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~--~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~--~~~~~~v~~l~~s~ 357 (359)
+...+|||.+.++.... .+.+|.+|.++|||+++| |++||+|++|||+++.+ ++|.+++.+++...
T Consensus 26 ~~~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~ 96 (206)
T 3r0h_A 26 VEKKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTY 96 (206)
T ss_dssp CTTSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCC
T ss_pred eCCCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcC
Confidence 45678999998765433 367999999999999987 99999999999999999 99999999988653
No 290
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.78 E-value=1.4e-08 Score=76.84 Aligned_cols=58 Identities=22% Similarity=0.145 Sum_probs=49.8
Q ss_pred cccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 295 EIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 295 ~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
..+||.+... ..+.+|.+|.++|||+++||++||+|++|||+++.+.++.++.++|+.
T Consensus 17 ~~lG~~~~~~---~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~ 74 (90)
T 2eaq_A 17 LDFGFTIKWD---IPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAK 74 (90)
T ss_dssp SCCSEEEEEE---TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHH
T ss_pred CcccEEEEec---CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHh
Confidence 3678887632 236789999999999999999999999999999977788999999885
No 291
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.78 E-value=4.9e-09 Score=78.16 Aligned_cols=74 Identities=20% Similarity=0.346 Sum_probs=57.5
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCe
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGI 276 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~ 276 (359)
..++|.|.|.. .+|||.+... .+++|..|.++|||+++| |++||+|++|||.++.+ +...++ .+..
T Consensus 2 ~~r~v~l~~~~-~g~G~~~~~~------~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 73 (83)
T 2kv8_A 2 RVRSVEVARGR-AGYGFTLSGQ------APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCSGV 73 (83)
T ss_dssp CEEEEEECCCS-SCCSCBCCCS------SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCSSC
T ss_pred CcEEEEEEeCC-CcccEEEEcC------CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 35678999986 5899887632 257888999999999999 99999999999999866 334333 3456
Q ss_pred EEEEEEeC
Q psy5022 277 EDHSFVKE 284 (359)
Q Consensus 277 v~l~v~~~ 284 (359)
++|++.|+
T Consensus 74 v~l~v~R~ 81 (83)
T 2kv8_A 74 LHMVIAEG 81 (83)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 88888764
No 292
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.78 E-value=4.5e-08 Score=78.50 Aligned_cols=80 Identities=29% Similarity=0.414 Sum_probs=59.6
Q ss_pred cEEEEeeCCCCCccceEEEecCCCC-cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----H---HHhhcCC
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGS-MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----Y---MEFLKAN 274 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~-~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~---~~~~~~~ 274 (359)
...+.+.+.. .+|||.+....... ...+++|..|.++|||+++|+|++||+|++|||.++.+ + ++....+
T Consensus 31 ~~~v~l~~~~-~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g 109 (121)
T 2kom_A 31 RLNIQLKKGT-EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKME 109 (121)
T ss_dssp EEEEEEECCT-TCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSS
T ss_pred EEEEEEEcCC-CcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Confidence 3456677764 58999998542110 12478999999999999999999999999999998865 3 3333346
Q ss_pred CeEEEEEEeC
Q psy5022 275 GIEDHSFVKE 284 (359)
Q Consensus 275 ~~v~l~v~~~ 284 (359)
..++|+|.|+
T Consensus 110 ~~v~l~v~R~ 119 (121)
T 2kom_A 110 GTVSLLVFRQ 119 (121)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEEeC
Confidence 7889988775
No 293
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.78 E-value=1.9e-08 Score=76.30 Aligned_cols=76 Identities=18% Similarity=0.226 Sum_probs=56.7
Q ss_pred EEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCeEE
Q psy5022 205 KEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGIED 278 (359)
Q Consensus 205 ~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~v~ 278 (359)
+.+.+... .+|||.+.++.. ...+++|..|.++|||+++| |++||+|++|||.++.+ +...++ .+..+.
T Consensus 5 ~~v~~~~~--~~~G~~l~~~~~--~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 79 (91)
T 2pkt_A 5 QQIDLQGP--GPWGFRLVGGKD--FEQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLT 79 (91)
T ss_dssp EEEEEESS--SCCSEEEEEEGG--GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEE
T ss_pred EEEEECCC--CCCCEEEEccCC--CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 34555543 589999985321 12468999999999999999 99999999999999876 222222 567899
Q ss_pred EEEEeCc
Q psy5022 279 HSFVKEM 285 (359)
Q Consensus 279 l~v~~~~ 285 (359)
|.+.|+.
T Consensus 80 l~v~R~g 86 (91)
T 2pkt_A 80 LTVARSE 86 (91)
T ss_dssp EEEEEEC
T ss_pred EEEEECC
Confidence 9988753
No 294
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.78 E-value=1e-08 Score=82.86 Aligned_cols=76 Identities=22% Similarity=0.337 Sum_probs=60.3
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh---cCC
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL---KAN 274 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~---~~~ 274 (359)
...++.+.+.. .+|||.+.+. ...++|..|.++|||+++|+|++||+|++|||.++.+ +...+ ..+
T Consensus 27 ~~~~~~l~k~~-~glG~~i~~~-----~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G 100 (126)
T 1wif_A 27 KVIQTKLTVGN-LGLGLVVIQN-----GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIG 100 (126)
T ss_dssp CEEEEEEECCT-TCCCCCEEEE-----TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSS
T ss_pred ceEEEEEecCC-ceEeEEEEcC-----CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Confidence 34567788875 5899988742 2467899999999999999999999999999999952 44443 456
Q ss_pred CeEEEEEEeC
Q psy5022 275 GIEDHSFVKE 284 (359)
Q Consensus 275 ~~v~l~v~~~ 284 (359)
..++|+|.|+
T Consensus 101 ~~v~l~V~R~ 110 (126)
T 1wif_A 101 TVLQIKAYRG 110 (126)
T ss_dssp CEEEEEEESS
T ss_pred CEEEEEEEEC
Confidence 7899999886
No 295
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.77 E-value=2.3e-08 Score=79.27 Aligned_cols=79 Identities=18% Similarity=0.257 Sum_probs=62.0
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCe
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGI 276 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~ 276 (359)
..+.+.+.+...+.|||.+... ....+++|..|.++|||+++| |++||+|++|||.++.+ +...++ .+..
T Consensus 13 dp~~~~l~~~~~~~~G~~l~~~---~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 88 (114)
T 2edz_A 13 NPRECKLSKQEGQNYGFFLRIE---KDTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNS 88 (114)
T ss_dssp CCEEEEEECCTTCCCSCEEECC---TTCCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSE
T ss_pred CCEEEEEeCCCCCcccEEEEEe---cCCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 4567888888778999998742 123478999999999999999 99999999999999865 333222 4678
Q ss_pred EEEEEEeCc
Q psy5022 277 EDHSFVKEM 285 (359)
Q Consensus 277 v~l~v~~~~ 285 (359)
+.|++.|+.
T Consensus 89 v~l~v~R~~ 97 (114)
T 2edz_A 89 VTLLVLDGD 97 (114)
T ss_dssp EEEEEECHH
T ss_pred EEEEEEECC
Confidence 999998754
No 296
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.77 E-value=3.9e-08 Score=77.57 Aligned_cols=78 Identities=33% Similarity=0.372 Sum_probs=60.7
Q ss_pred cEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCC-CCCCEEEEECCccHHH-----HHHhh--cCCC
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQL-NIGDQIIAVNGVSLVA-----YMEFL--KANG 275 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L-~~GD~Il~Vng~~v~~-----~~~~~--~~~~ 275 (359)
..+|.|.|....+||+.+.... ...+++|..|.++|||+++| | ++||+|++|||.++.+ +...+ ..+.
T Consensus 2 ~~~v~l~~~~~~glG~~~~~~~---~~~~~~V~~v~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~ 77 (112)
T 1qau_A 2 VISVRLFKRKVGGLGFLVKERV---SKPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGIASE 77 (112)
T ss_dssp EEEEEEECBTTTBTSEEEEECS---SSSCEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSS
T ss_pred EEEEEEEcCCCCceeEEEEecC---CCCCEEEEEeCCCChHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 3568888876679999998532 23478999999999999999 7 9999999999998765 22222 2456
Q ss_pred eEEEEEEeCc
Q psy5022 276 IEDHSFVKEM 285 (359)
Q Consensus 276 ~v~l~v~~~~ 285 (359)
.+.|.+.|+.
T Consensus 78 ~v~l~v~R~g 87 (112)
T 1qau_A 78 THVVLILRGP 87 (112)
T ss_dssp SEEEEEEECC
T ss_pred cEEEEEEeCC
Confidence 8999998764
No 297
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.77 E-value=1.7e-08 Score=75.38 Aligned_cols=75 Identities=20% Similarity=0.240 Sum_probs=55.4
Q ss_pred EEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCeEE
Q psy5022 205 KEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGIED 278 (359)
Q Consensus 205 ~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~v~ 278 (359)
.+|.+.+ ..+|||.+.++. . ...+++|..|.++|||+++| |++||+|++|||.++.+ +...++ .+..+.
T Consensus 3 ~~v~l~~--~~~~G~~l~gg~-~-~~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 77 (85)
T 1rgw_A 3 YSVTLTG--PGPWGFRLQGGK-D-FNMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLS 77 (85)
T ss_dssp EEEEECC--SSCCCEEECCCG-G-GTSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEE
T ss_pred EEEEEeC--CCccCEEEEecc-C-CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEE
Confidence 3566743 358999997432 1 12367999999999999999 99999999999999876 333333 345688
Q ss_pred EEEEeC
Q psy5022 279 HSFVKE 284 (359)
Q Consensus 279 l~v~~~ 284 (359)
|.+.|+
T Consensus 78 l~v~R~ 83 (85)
T 1rgw_A 78 LTLQKS 83 (85)
T ss_dssp EEEESC
T ss_pred EEEEeC
Confidence 888764
No 298
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.76 E-value=3.6e-08 Score=76.66 Aligned_cols=77 Identities=23% Similarity=0.297 Sum_probs=55.5
Q ss_pred EEEeeCCC---CCccceEEEecCC--------C--CcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----H
Q psy5022 206 EVVVPKAK---GEILGVVIVESGW--------G--SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----Y 267 (359)
Q Consensus 206 ~v~l~r~~---~~~lG~~i~~~~~--------g--~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~ 267 (359)
.+.+.+.. ...|||++.++.. + ....+++|..|.++|||+++| |++||+|++|||.++.+ +
T Consensus 7 ~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~ 85 (104)
T 3sfj_A 7 RVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQA 85 (104)
T ss_dssp EEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred EEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 35555432 2369999984311 1 123478999999999999999 99999999999999855 4
Q ss_pred HHhhc--CCCeEEEEEEe
Q psy5022 268 MEFLK--ANGIEDHSFVK 283 (359)
Q Consensus 268 ~~~~~--~~~~v~l~v~~ 283 (359)
...++ .+..+.|.+.|
T Consensus 86 ~~~l~~~~g~~v~l~v~R 103 (104)
T 3sfj_A 86 RKRLTKRSEEVVRLLVTR 103 (104)
T ss_dssp HHHHTCTTCSEEEEEEEE
T ss_pred HHHHHhCCCCEEEEEEEc
Confidence 44443 45678888765
No 299
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.75 E-value=3.7e-08 Score=78.38 Aligned_cols=77 Identities=22% Similarity=0.277 Sum_probs=60.5
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH------HHHhhcCCCe
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA------YMEFLKANGI 276 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~------~~~~~~~~~~ 276 (359)
..+.|.+.+.. ..||+.+.... ..+++|..|.++|||+++| |++||+|++|||+++.+ .+.....+..
T Consensus 19 ~~~~v~l~~~~-~~lG~~~~~~~----~~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~ 92 (117)
T 1uit_A 19 EPRHVKVQKGS-EPLGISIVSGE----KGGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQCDT 92 (117)
T ss_dssp CCEEEEEECSS-CCCCEEEEECT----TSCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSCCSE
T ss_pred CCEEEEEEeCC-CCccEEEEccC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 34578888875 58999997532 2478999999999999999 99999999999999876 2222245678
Q ss_pred EEEEEEeCc
Q psy5022 277 EDHSFVKEM 285 (359)
Q Consensus 277 v~l~v~~~~ 285 (359)
+.|.+.|+.
T Consensus 93 v~l~v~r~~ 101 (117)
T 1uit_A 93 ITILAQYNP 101 (117)
T ss_dssp EEEEECCCS
T ss_pred EEEEEEECC
Confidence 899888754
No 300
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.75 E-value=6e-09 Score=82.36 Aligned_cols=64 Identities=22% Similarity=0.285 Sum_probs=54.7
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.+... ..+.+|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 23 k~~~glG~~l~~~~~-~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~ 87 (113)
T 1um7_A 23 KGSTGLGFNIVGGED-GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRA 87 (113)
T ss_dssp CCSSCSSBCCBCCST-TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSC
T ss_pred ECCCcccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 455679999876432 3467899999999999999 999999999999999999999999888753
No 301
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.75 E-value=5.3e-09 Score=80.39 Aligned_cols=56 Identities=23% Similarity=0.445 Sum_probs=50.3
Q ss_pred cccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 295 EIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 295 ~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
.+|||.+.+ ..+.+|..|.++|||+ +||++||+|++|||+++.++++.+++.+++.
T Consensus 21 ~~~G~~l~~----~~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~ 76 (96)
T 2edv_A 21 QDYGFHISE----SLPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILRE 76 (96)
T ss_dssp CSCSBCCCS----SSSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHH
T ss_pred CcccEEEec----CCCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 468998874 3478999999999996 9999999999999999999999999999986
No 302
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.75 E-value=1.4e-08 Score=78.97 Aligned_cols=76 Identities=28% Similarity=0.358 Sum_probs=57.2
Q ss_pred EEEEeeCCCCCccceEEEecCCC------CcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-c
Q psy5022 205 KEVVVPKAKGEILGVVIVESGWG------SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-K 272 (359)
Q Consensus 205 ~~v~l~r~~~~~lG~~i~~~~~g------~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~ 272 (359)
.++.+.|. .+|||++.++..+ ....+++|..|.++|||++ | |++||+|++|||.++.+ .+..+ .
T Consensus 13 ~~v~l~~~--~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 88 (103)
T 1n7t_A 13 IRVRVEKD--PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKT 88 (103)
T ss_dssp EEEEEECS--SCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEccC--CCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHHHhhc
Confidence 45777776 3799999864211 1235789999999999999 9 99999999999999865 22222 3
Q ss_pred CCCeEEEEEEeC
Q psy5022 273 ANGIEDHSFVKE 284 (359)
Q Consensus 273 ~~~~v~l~v~~~ 284 (359)
.+..++|.+.|+
T Consensus 89 ~g~~v~l~v~R~ 100 (103)
T 1n7t_A 89 FQNTVELIIVRE 100 (103)
T ss_dssp CCSEEEEEEECC
T ss_pred CCCeEEEEEEec
Confidence 467889988875
No 303
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.74 E-value=3.5e-08 Score=74.48 Aligned_cols=71 Identities=20% Similarity=0.382 Sum_probs=53.4
Q ss_pred EEeeC-CCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCeEEE
Q psy5022 207 VVVPK-AKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGIEDH 279 (359)
Q Consensus 207 v~l~r-~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~v~l 279 (359)
+.+.+ ..++.+|+.+.+ +++|..|.++|||+++|+|+.||+|++|||.++.+ +...++ .++.++|
T Consensus 4 v~l~~~~~~~~~G~~~~~--------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L 75 (88)
T 3e17_A 4 VLLMKSRANEEYGLRLGS--------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQL 75 (88)
T ss_dssp EEEECBTTBCCCCEEEEE--------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEE
T ss_pred EEEEeCCCCCCCCEEEeC--------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 44544 334688888863 68999999999999999999999999999999854 333222 3457888
Q ss_pred EEEeCc
Q psy5022 280 SFVKEM 285 (359)
Q Consensus 280 ~v~~~~ 285 (359)
++.+..
T Consensus 76 ~v~~~~ 81 (88)
T 3e17_A 76 VVLRDL 81 (88)
T ss_dssp EECCC-
T ss_pred EEeCCC
Confidence 887653
No 304
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.74 E-value=2.6e-08 Score=79.04 Aligned_cols=80 Identities=18% Similarity=0.275 Sum_probs=61.0
Q ss_pred cccEEEEeeCCCCC--ccceEEEecC-CCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhcC
Q psy5022 202 ELQKEVVVPKAKGE--ILGVVIVESG-WGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLKA 273 (359)
Q Consensus 202 ~~~~~v~l~r~~~~--~lG~~i~~~~-~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~~ 273 (359)
...+++.|.|.... .|||.+.... .+ ..+++|..|.++|||+++| |++||+|++|||.++.+ +...++.
T Consensus 14 ~~~~~v~l~k~~~~~~~~G~~v~~~~~~~--~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~ 90 (114)
T 2d8i_A 14 KVTQSIHIEKSDTAADTYGFSLSSVEEDG--IRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ 90 (114)
T ss_dssp CEEEEEEEECSCTTTCCCCCEEEEEEETT--EEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTS
T ss_pred CceEEEEEEeCCCCccccCEEEEecCcCC--cCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC
Confidence 45578899988653 6999997521 11 1468999999999999999 99999999999999876 3334443
Q ss_pred CCeEEEEEEeCc
Q psy5022 274 NGIEDHSFVKEM 285 (359)
Q Consensus 274 ~~~v~l~v~~~~ 285 (359)
..+.|+|.|..
T Consensus 91 -~~v~l~v~R~p 101 (114)
T 2d8i_A 91 -PSLGLLVRTYP 101 (114)
T ss_dssp -SEEEEEEEECC
T ss_pred -CcEEEEEEECC
Confidence 47888888753
No 305
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.74 E-value=5.1e-08 Score=78.88 Aligned_cols=81 Identities=26% Similarity=0.308 Sum_probs=63.0
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhcCCCe
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLKANGI 276 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~~~~~ 276 (359)
...+++.+.......|||.+.+... ...+++|..|.++|||+++| |++||+|++|||.++.+ ++..++.+..
T Consensus 19 g~~~~v~v~~~~~~~lG~~~~~~~~--~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 95 (128)
T 1uf1_A 19 GDEKKVNLVLGDGRSLGLTIRGGAE--YGLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSSRH 95 (128)
T ss_dssp SSEEEEEEECCSSCCCCEEEECCTT--TTCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCSE
T ss_pred CcEEEEEEEECCCCccCEEEECccc--CCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCe
Confidence 3445667766544689999975311 12378999999999999999 99999999999999876 5666777778
Q ss_pred EEEEEEeCc
Q psy5022 277 EDHSFVKEM 285 (359)
Q Consensus 277 v~l~v~~~~ 285 (359)
+.|.|.|..
T Consensus 96 v~l~v~R~g 104 (128)
T 1uf1_A 96 LILTVKDVG 104 (128)
T ss_dssp EEEEEECCS
T ss_pred EEEEEEECC
Confidence 999998764
No 306
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.73 E-value=2.5e-08 Score=78.43 Aligned_cols=75 Identities=20% Similarity=0.250 Sum_probs=57.5
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc--CC
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK--AN 274 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~--~~ 274 (359)
...+.+.|.|.. .++||.+.+. .+++|..|.++|||+++| |++||+|++|||.++.+ +...++ .+
T Consensus 22 ~~~r~v~l~k~~-~~~G~~l~~~------~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~ 93 (109)
T 2vsv_A 22 SMPRSIRFTAEE-GDLGFTLRGN------APVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGE 93 (109)
T ss_dssp HSCEEEEECCGG-GCCCEEEESS------SSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred CCCEEEEEEeCC-CceeEEEeCC------CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 455789999864 5899988631 256899999999999999 99999999999999883 333333 23
Q ss_pred CeEEEEEEeC
Q psy5022 275 GIEDHSFVKE 284 (359)
Q Consensus 275 ~~v~l~v~~~ 284 (359)
..++|+|.+.
T Consensus 94 ~~v~l~V~~~ 103 (109)
T 2vsv_A 94 DEIEMKVVSL 103 (109)
T ss_dssp SCEEEEEESC
T ss_pred CeEEEEEEEC
Confidence 3488888764
No 307
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.73 E-value=2.5e-08 Score=77.63 Aligned_cols=62 Identities=29% Similarity=0.305 Sum_probs=50.4
Q ss_pred ccEEEEeeCCCCCccceEEEecCC----C-CcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHH
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGW----G-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV 265 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~----g-~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~ 265 (359)
..+++.+.|..++.|||.+.+... + ....+++|..|.++|||+++| |++||+|++|||+++.
T Consensus 15 ~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~ 81 (104)
T 2z17_A 15 QRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTE 81 (104)
T ss_dssp CCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECT
T ss_pred cceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcC
Confidence 345688999877799999986311 1 122478999999999999999 9999999999999987
No 308
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.73 E-value=4.7e-08 Score=77.14 Aligned_cols=77 Identities=13% Similarity=0.057 Sum_probs=59.4
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH--------HHHhhcC
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--------YMEFLKA 273 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--------~~~~~~~ 273 (359)
...++|.|.|.. .+|||+|.++.. +.+|..|.+ ++..+| |++||+|++|||.++.+ +++....
T Consensus 11 ~~~~~V~L~Kg~-~G~GFsI~~~~~-----g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~ 81 (113)
T 3soe_A 11 GLLVTIPLIKGP-KGFGFAIADSPT-----GQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPV 81 (113)
T ss_dssp CEEEEEEEECBT-TBSSEEEEEETT-----EEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHSCT
T ss_pred CCEEEEEEEECC-CcccEEEeCCCC-----CcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 345689999985 599999975432 456888877 577788 99999999999999875 4444445
Q ss_pred CCeEEEEEEeCcce
Q psy5022 274 NGIEDHSFVKEMDY 287 (359)
Q Consensus 274 ~~~v~l~v~~~~~~ 287 (359)
+..++|+|.|+...
T Consensus 82 G~~v~L~V~R~g~~ 95 (113)
T 3soe_A 82 GADVPLLILRGGPP 95 (113)
T ss_dssp TCEEEEEEEESSCC
T ss_pred CCEEEEEEEECCcc
Confidence 77899999987543
No 309
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.72 E-value=3.1e-08 Score=76.33 Aligned_cols=78 Identities=22% Similarity=0.289 Sum_probs=57.5
Q ss_pred EEEeeCCCCCccceEEEecCC--CCc---CCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCC
Q psy5022 206 EVVVPKAKGEILGVVIVESGW--GSM---LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KAN 274 (359)
Q Consensus 206 ~v~l~r~~~~~lG~~i~~~~~--g~~---~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~ 274 (359)
++.+.|. +.++||++..... |.. ..+++|..|.++|||+++| |++||+|++|||.++.+ +...+ ..+
T Consensus 5 ~v~l~~~-~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 82 (99)
T 3khf_A 5 PIVIHSS-GKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKSG 82 (99)
T ss_dssp CEEEEC--CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred CEEEEeC-CCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 4677776 5699999975321 111 1256899999999999999 99999999999999874 22222 467
Q ss_pred CeEEEEEEeCc
Q psy5022 275 GIEDHSFVKEM 285 (359)
Q Consensus 275 ~~v~l~v~~~~ 285 (359)
..+.|++.|..
T Consensus 83 ~~v~l~v~r~~ 93 (99)
T 3khf_A 83 NKISLRTTALE 93 (99)
T ss_dssp SEEEEEEECSC
T ss_pred CEEEEEEEECC
Confidence 78999998754
No 310
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.71 E-value=1.6e-08 Score=79.06 Aligned_cols=78 Identities=22% Similarity=0.287 Sum_probs=60.2
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCCCe
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KANGI 276 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~~ 276 (359)
..+.+.|.|. +.+|||.+.... ...+++|..|.++|||+++| |++||+|++|||.++.+ ++..+ ..+..
T Consensus 8 ~~r~v~l~k~-~~~~G~~l~~~~---~~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 82 (106)
T 2eei_A 8 QPRLCYLVKE-GGSYGFSLKTVQ---GKKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKSGSR 82 (106)
T ss_dssp SSEEEEEECC-SSSCSCCEECCS---SCCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHHCSE
T ss_pred CCEEEEEEEC-CCCCCEEEEecc---CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 4578999996 569999997432 23468999999999999999 99999999999999864 22222 23567
Q ss_pred EEEEEEeCc
Q psy5022 277 EDHSFVKEM 285 (359)
Q Consensus 277 v~l~v~~~~ 285 (359)
+.|.+.+..
T Consensus 83 v~l~v~r~~ 91 (106)
T 2eei_A 83 VMFLLVDKE 91 (106)
T ss_dssp EEEEECCTT
T ss_pred EEEEEEcCc
Confidence 888887754
No 311
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.71 E-value=1.7e-08 Score=78.14 Aligned_cols=81 Identities=17% Similarity=0.218 Sum_probs=58.9
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhc-CCCCCCCEEEEECCccHHH----HHHhhc-CCC
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARC-GQLNIGDQIIAVNGVSLVA----YMEFLK-ANG 275 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~-G~L~~GD~Il~Vng~~v~~----~~~~~~-~~~ 275 (359)
...+++.+.+....+|||.+.++. . ...+++|..|.++|||+++ | |++||+|++|||+++.+ .+..++ .+.
T Consensus 8 ~~~~~~~v~~~~~~~~G~~~~gg~-~-~~~~v~V~~V~~~spA~~agG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~~ 84 (100)
T 2edp_A 8 GSFQYVPVQLQGGAPWGFTLKGGL-E-HCEPLTVSKIEDGGKAALSQK-MRTGDELVNINGTPLYGSRQEALILIKGSFR 84 (100)
T ss_dssp CCCEEEEEECCSCSCCCCCEEEEG-G-GTEEEEECCCCTTSHHHHHTS-CCTTCEEEEETTEECCSCSHHHHHHHHTCCS
T ss_pred CCcEEEEEEECCCCCcCEEEeccC-C-CCCCeEEEEECCCCHHHHcCC-CCCCCEEEEECCEEccchHHHHHHHHHhCCC
Confidence 344556666665568999998532 1 1235789999999999999 7 99999999999998865 333333 346
Q ss_pred eEEEEEEeCc
Q psy5022 276 IEDHSFVKEM 285 (359)
Q Consensus 276 ~v~l~v~~~~ 285 (359)
.++|+|.|+.
T Consensus 85 ~v~l~v~R~~ 94 (100)
T 2edp_A 85 ILKLIVRRRN 94 (100)
T ss_dssp SCEEEEEECC
T ss_pred eEEEEEEeCC
Confidence 7888888753
No 312
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.70 E-value=1.2e-08 Score=77.91 Aligned_cols=76 Identities=18% Similarity=0.197 Sum_probs=56.4
Q ss_pred EEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhcC-CCeEEEE
Q psy5022 207 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLKA-NGIEDHS 280 (359)
Q Consensus 207 v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~~-~~~v~l~ 280 (359)
+.+.+....+|||++.++.. ...+++|..|.++|||+++| |++||+|++|||.++.+ +...++. ...+.|.
T Consensus 8 ~~~~~~~~~~lG~~l~~g~~--~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~ 84 (94)
T 1vb7_A 8 LTVDVAGPAPWGFRISGGRD--FHTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQ 84 (94)
T ss_dssp EEEEECSSSCCSBCCEEETT--TTEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEE
T ss_pred EEEEecCCCCccEEEecccC--CCCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEE
Confidence 45555555789999975321 12367899999999999999 99999999999998865 3333332 2678898
Q ss_pred EEeCc
Q psy5022 281 FVKEM 285 (359)
Q Consensus 281 v~~~~ 285 (359)
+.|+.
T Consensus 85 v~R~g 89 (94)
T 1vb7_A 85 LDRSS 89 (94)
T ss_dssp EECCC
T ss_pred EEECC
Confidence 88764
No 313
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.70 E-value=3.7e-08 Score=75.21 Aligned_cols=77 Identities=21% Similarity=0.175 Sum_probs=56.9
Q ss_pred cEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCeE
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGIE 277 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~v 277 (359)
.+.|.+.+. .+|||.+.++. . ...+++|..|.++|||+++| |++||+|++|||+++.+ +...++ .+..+
T Consensus 9 ~~~v~l~~~--~~~G~~l~gg~-~-~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 83 (94)
T 2eeg_A 9 PHSVTLRGP--SPWGFRLVGGR-D-FSAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGCHDHL 83 (94)
T ss_dssp CEEEEECCS--SCCSCCEECCT-T-TTSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCE
T ss_pred eEEEEEeCC--CccCEEEECcc-C-CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 456777443 58999998532 1 12467899999999999999 99999999999999876 222222 45678
Q ss_pred EEEEEeCc
Q psy5022 278 DHSFVKEM 285 (359)
Q Consensus 278 ~l~v~~~~ 285 (359)
.|+|.|+.
T Consensus 84 ~l~v~R~g 91 (94)
T 2eeg_A 84 TLSVSSGP 91 (94)
T ss_dssp EEEEECCS
T ss_pred EEEEEeCC
Confidence 88887753
No 314
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.70 E-value=4.6e-08 Score=78.80 Aligned_cols=67 Identities=24% Similarity=0.307 Sum_probs=53.8
Q ss_pred CCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH--------HHHhhcCCCeEEEEEEeCc
Q psy5022 214 GEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--------YMEFLKANGIEDHSFVKEM 285 (359)
Q Consensus 214 ~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--------~~~~~~~~~~v~l~v~~~~ 285 (359)
++.||+.+.++. ..+++|..|.++|||+++| |++||+|++|||.++.+ ++.....+..++|++.|+.
T Consensus 38 ~~~lG~~l~~~~----~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 112 (124)
T 3tsv_A 38 GDSVGLRLAGGN----DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKK 112 (124)
T ss_dssp SSCCCEEEEECT----TSCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECH
T ss_pred CCceeEEEecCC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 468999998532 2478999999999999999 99999999999998765 2343346778999988753
No 315
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.68 E-value=2.7e-08 Score=79.21 Aligned_cols=61 Identities=15% Similarity=0.249 Sum_probs=51.2
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLA 354 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~ 354 (359)
+....+||.+.... ..+.+|..|.++|||+++||++||+|++|||+++.++++.+++.+++
T Consensus 27 ~~~~~lG~~~~~~~--~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~ 87 (117)
T 1uit_A 27 KGSEPLGISIVSGE--KGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIG 87 (117)
T ss_dssp CSSCCCCEEEEECT--TSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTT
T ss_pred eCCCCccEEEEccC--CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34467899987542 24789999999999999999999999999999999998888776554
No 316
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.68 E-value=5.9e-08 Score=74.60 Aligned_cols=75 Identities=19% Similarity=0.197 Sum_probs=56.8
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHH--H------HHHhh-c
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV--A------YMEFL-K 272 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~--~------~~~~~-~ 272 (359)
...+.+.+.+.. .++||.+... ..+++|..|.++|||+++| |++||+|++|||.++. + .++.. .
T Consensus 16 ~~~~~l~l~~~~-~g~G~~l~~~-----~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~ 88 (101)
T 3qik_A 16 ILAKRLLILPQE-EDYGFDIEEK-----NKAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFC 88 (101)
T ss_dssp TTEEEEEECCCS-SSSSEEEEEE-----TTEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHH
T ss_pred eecCeEEEEeCC-CcccEEEEcc-----CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhc
Confidence 344456676664 5899998742 2367899999999999999 9999999999999873 2 44443 4
Q ss_pred CCCeEEEEEEe
Q psy5022 273 ANGIEDHSFVK 283 (359)
Q Consensus 273 ~~~~v~l~v~~ 283 (359)
.++.+.|.|..
T Consensus 89 ~g~~v~LLV~~ 99 (101)
T 3qik_A 89 SRRPLRLLVAT 99 (101)
T ss_dssp TTCCEEEEEEC
T ss_pred cCCeEEEEEec
Confidence 57788888763
No 317
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.68 E-value=9.4e-08 Score=73.07 Aligned_cols=79 Identities=24% Similarity=0.328 Sum_probs=58.5
Q ss_pred EEEEeeCCCCCccceEEEecCCC--CcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCe
Q psy5022 205 KEVVVPKAKGEILGVVIVESGWG--SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGI 276 (359)
Q Consensus 205 ~~v~l~r~~~~~lG~~i~~~~~g--~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~ 276 (359)
.++.+.+.. .+|||.+...... ....+++|..|.++|||+++|+|++||+|++|||.++.+ ++..++ .+..
T Consensus 6 ~~v~l~~~~-~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 84 (97)
T 2iwn_A 6 FDVELTKNV-QGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQT 84 (97)
T ss_dssp EEEEEECBT-TBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSE
T ss_pred EEEEEecCC-CCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 457777764 5899999853110 123478999999999999999999999999999999875 233322 5667
Q ss_pred EEEEEEeC
Q psy5022 277 EDHSFVKE 284 (359)
Q Consensus 277 v~l~v~~~ 284 (359)
+.|.+.|+
T Consensus 85 v~l~v~r~ 92 (97)
T 2iwn_A 85 VLLTLMRR 92 (97)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEeC
Confidence 88888764
No 318
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.68 E-value=2.8e-08 Score=86.50 Aligned_cols=64 Identities=27% Similarity=0.252 Sum_probs=55.7
Q ss_pred ccccCcEEecccc----cccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Q psy5022 294 QEIFGDELQMFAK----KELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSV 357 (359)
Q Consensus 294 ~~~~G~~~~~~~~----~~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~ 357 (359)
..+|||.+.++.. ...+.+|..|.++|||+++| |++||+|++|||+++.+++|.++..+|+...
T Consensus 17 ~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 85 (196)
T 1p1d_A 17 VTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSS 85 (196)
T ss_dssp TTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCC
T ss_pred CCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4789999997532 23467899999999999999 9999999999999999988999999998764
No 319
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.66 E-value=1.3e-08 Score=82.20 Aligned_cols=64 Identities=22% Similarity=0.357 Sum_probs=54.9
Q ss_pred ccccCcEEecccccccCcEEEEEcCCChhhcCCC-CCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 294 QEIFGDELQMFAKKELQKEICSLLRGGIAERGGV-RVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL-~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
..++||.+.... ...+.+|..|.++|||+++|| ++||+|++|||+++.+++++++.++|+...|
T Consensus 19 ~~glG~~~~~~~-~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g 83 (127)
T 1b8q_A 19 VGGLGFLVKERV-SKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIAS 83 (127)
T ss_dssp TSCCSCCEEECT-TSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCS
T ss_pred CCcEeEEEEecC-CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 368899987542 223678999999999999998 9999999999999999999999999987654
No 320
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.66 E-value=3.4e-08 Score=95.05 Aligned_cols=63 Identities=21% Similarity=0.295 Sum_probs=55.4
Q ss_pred ccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-ccC
Q psy5022 294 QEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT-SVG 358 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~-s~g 358 (359)
..++|+.+.++. ..+.+|.+|.+||||+++||++||+|++|||.++.++++++++.+|+. .+|
T Consensus 18 ~~~lG~~i~gg~--~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g 81 (391)
T 3tsz_A 18 GDSVGLRLAGGN--DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKG 81 (391)
T ss_dssp CSSCCEEEEEET--TTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTT
T ss_pred CCceeEEEEecC--CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCC
Confidence 346999998643 247899999999999999999999999999999999999999999997 455
No 321
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.66 E-value=1.5e-08 Score=77.84 Aligned_cols=75 Identities=21% Similarity=0.232 Sum_probs=58.0
Q ss_pred ccEEEEeeCCCCC-ccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCC
Q psy5022 203 LQKEVVVPKAKGE-ILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANG 275 (359)
Q Consensus 203 ~~~~v~l~r~~~~-~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~ 275 (359)
..++|.|.|.... +|||.+.+ ..+++|..|.++|||+ +| |++||+|++|||.++.+ .+..++ .++
T Consensus 8 ~~~~v~l~~~~~~~~~G~~l~~------~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~ 79 (96)
T 2edv_A 8 VRHTVKIDKDTLLQDYGFHISE------SLPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREAED 79 (96)
T ss_dssp EEEEEEECCCSSSCSCSBCCCS------SSSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHCSS
T ss_pred ccEEEEEEECCCCCcccEEEec------CCCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 3467889888643 78988863 2367899999999996 88 99999999999999865 333333 567
Q ss_pred eEEEEEEeCc
Q psy5022 276 IEDHSFVKEM 285 (359)
Q Consensus 276 ~v~l~v~~~~ 285 (359)
.+.|++.|+.
T Consensus 80 ~v~l~v~R~~ 89 (96)
T 2edv_A 80 SLSITVVRCT 89 (96)
T ss_dssp CEEEEEEECC
T ss_pred eEEEEEEECC
Confidence 8999998764
No 322
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.66 E-value=3.2e-08 Score=78.10 Aligned_cols=79 Identities=24% Similarity=0.290 Sum_probs=61.3
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCCC
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KANG 275 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~ 275 (359)
...+.|.|.|.. .+|||++.+.. ...+++|..|.++|||+++|+|++||+|++|||+++.+ ....+ ..+.
T Consensus 14 ~~~~~v~l~k~~-~glG~~l~~~~---~~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~ 89 (113)
T 1um7_A 14 REPRKIILHKGS-TGLGFNIVGGE---DGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQ 89 (113)
T ss_dssp CSEEEEEEECCS-SCSSBCCBCCS---TTCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCCS
T ss_pred CceEEEEEEECC-CcccEEEEecc---CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 356779999875 58999987432 13577899999999999999999999999999999876 22222 3466
Q ss_pred eEEEEEEeC
Q psy5022 276 IEDHSFVKE 284 (359)
Q Consensus 276 ~v~l~v~~~ 284 (359)
.+.|.+.+.
T Consensus 90 ~v~l~v~r~ 98 (113)
T 1um7_A 90 SVTIVAQYR 98 (113)
T ss_dssp EEEEEEECC
T ss_pred cEEEEEEEC
Confidence 788888765
No 323
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.66 E-value=6.1e-08 Score=79.72 Aligned_cols=82 Identities=22% Similarity=0.327 Sum_probs=60.6
Q ss_pred ccEEEEeeCCC---CCccceEEEecC--------CC--CcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH---
Q psy5022 203 LQKEVVVPKAK---GEILGVVIVESG--------WG--SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--- 266 (359)
Q Consensus 203 ~~~~v~l~r~~---~~~lG~~i~~~~--------~g--~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--- 266 (359)
..+.|.|.+.. ...|||.+.++. ++ ....+++|..|.++|||+++| |++||+|++|||.++.+
T Consensus 23 ~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~ 101 (139)
T 2vz5_A 23 MVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTH 101 (139)
T ss_dssp EEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred ceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCCCH
Confidence 44667777642 137999997531 11 113578999999999999999 99999999999999873
Q ss_pred --HHHhhc--CCCeEEEEEEeCc
Q psy5022 267 --YMEFLK--ANGIEDHSFVKEM 285 (359)
Q Consensus 267 --~~~~~~--~~~~v~l~v~~~~ 285 (359)
+...++ .+..+.|.|.|+.
T Consensus 102 ~~~~~~l~~~~g~~v~l~v~R~g 124 (139)
T 2vz5_A 102 DQARKRLTKRSEEVVRLLVTRQS 124 (139)
T ss_dssp HHHHHHHCCTTCSEEEEEEEECC
T ss_pred HHHHHHHHhCCCCEEEEEEEECC
Confidence 444443 4568999998864
No 324
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.65 E-value=9.9e-08 Score=72.32 Aligned_cols=68 Identities=29% Similarity=0.452 Sum_probs=50.4
Q ss_pred EEEeeC-CCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCCCeEE
Q psy5022 206 EVVVPK-AKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KANGIED 278 (359)
Q Consensus 206 ~v~l~r-~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~~v~ 278 (359)
.+.+.+ .....|||.+.+ + +|..|.++|||+++| |++||+|++|||.++.+ +...+ ..+..++
T Consensus 14 ~~~i~~~~~~~~lG~~~~~--------G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~ 83 (90)
T 1y7n_A 14 TVLIRRPDLRYQLGFSVQN--------G-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIH 83 (90)
T ss_dssp EEEEEESSTTSCCCEEEET--------T-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEE
T ss_pred eEEEEeCCCccccCeEecC--------C-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 334433 335689998852 2 889999999999999 99999999999999953 33333 2456788
Q ss_pred EEEEe
Q psy5022 279 HSFVK 283 (359)
Q Consensus 279 l~v~~ 283 (359)
|++.+
T Consensus 84 l~v~p 88 (90)
T 1y7n_A 84 MKTMP 88 (90)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 88765
No 325
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.64 E-value=2.5e-08 Score=88.09 Aligned_cols=64 Identities=22% Similarity=0.268 Sum_probs=55.0
Q ss_pred ccccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 292 NSQEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 292 ~~~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+...+|||.+.+... ..+.+|..|.+||||+++||++||+|++|||+++.++++++++.+|+..
T Consensus 17 k~~~glG~~l~~~~~-~~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~ 80 (216)
T 2krg_A 17 KGPSGYGFNLHSDKS-KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAG 80 (216)
T ss_dssp CCSSSSCEEECCCSS-SCSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHH
T ss_pred eCCCCceEEEEecCC-CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 445679999976432 2368999999999999999999999999999999988999999999865
No 326
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.64 E-value=3.6e-08 Score=89.52 Aligned_cols=80 Identities=25% Similarity=0.220 Sum_probs=62.5
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhh-cCCCCCCCEEEEECCccHHH-----HHHhhc-CCC
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAAR-CGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANG 275 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~-~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~ 275 (359)
..+.|.|.|..+++|||+|.++.- ...+++|..|.++|||++ +| |++||+|++|||+++.+ ++..++ .++
T Consensus 77 ~~r~V~L~k~~~~glGf~I~gg~d--~~~gi~V~~V~~gspA~~~aG-L~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~ 153 (263)
T 1z87_A 77 QRRRVTVRKADAGGLGISIKGGRE--NKMPILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSSATHDEAVQALKKTGK 153 (263)
T ss_dssp SSEEECCCTTTTCCCCCEEEEETT--TTEEEEEEECCTTSHHHHCTT-CCSSCEEEEESSCBCTTSCHHHHHHHHHHCCS
T ss_pred ccEEEEEEeCCCCCEeEEEeeccC--CCCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCcCHHHHHHHHhcCCC
Confidence 467899999877899999986421 124689999999999999 57 99999999999999877 222222 356
Q ss_pred eEEEEEEeCc
Q psy5022 276 IEDHSFVKEM 285 (359)
Q Consensus 276 ~v~l~v~~~~ 285 (359)
.++|+|.|..
T Consensus 154 ~V~L~V~R~~ 163 (263)
T 1z87_A 154 EVVLEVKYMK 163 (263)
T ss_dssp CCCEEEECCS
T ss_pred eEEEEEEeCc
Confidence 7999998754
No 327
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.64 E-value=3.8e-08 Score=76.50 Aligned_cols=77 Identities=16% Similarity=0.239 Sum_probs=56.8
Q ss_pred cEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCCCeE
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KANGIE 277 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~~v 277 (359)
..+|.+.. ..+|||.+.++.. ...+++|..|.++|||+++| |++||+|++|||.++.+ +...+ ..+..+
T Consensus 6 ~~~v~l~~--~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 80 (103)
T 1wf7_A 6 SGSVSLVG--PAPWGFRLQGGKD--FNMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSL 80 (103)
T ss_dssp CEEEEEES--SSCCSCCEEEETT--TTEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEE
T ss_pred EEEEEEeC--CCccCEEEecccc--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 34677763 3589999985421 12357899999999999999 99999999999998865 22222 245678
Q ss_pred EEEEEeCc
Q psy5022 278 DHSFVKEM 285 (359)
Q Consensus 278 ~l~v~~~~ 285 (359)
.|++.|+.
T Consensus 81 ~l~v~R~g 88 (103)
T 1wf7_A 81 NMTLQRAS 88 (103)
T ss_dssp EEEECCCS
T ss_pred EEEEEeCC
Confidence 88887754
No 328
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.63 E-value=2.5e-08 Score=79.64 Aligned_cols=62 Identities=18% Similarity=0.208 Sum_probs=51.2
Q ss_pred cccCcEEecccc---cccCcEEEEEcC--CChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 295 EIFGDELQMFAK---KELQKEICSLLR--GGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 295 ~~~G~~~~~~~~---~~~~~~I~~v~~--gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+.+||.+..... ...+.+|..|.+ ++||+++||++||+|++|||+++.+++++++..+|+..
T Consensus 27 g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~ 93 (118)
T 2yub_A 27 CRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQT 93 (118)
T ss_dssp SSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCC
T ss_pred CCceEEEEeccccccCCCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhC
Confidence 456777663211 124678999999 99999999999999999999999999999999999875
No 329
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.62 E-value=6.6e-08 Score=77.82 Aligned_cols=62 Identities=27% Similarity=0.394 Sum_probs=51.8
Q ss_pred cccCcEEeccccc--ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 295 EIFGDELQMFAKK--ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 295 ~~~G~~~~~~~~~--~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
..+|+.+...... ..+.+|..|.++|||+++| |++||+|++|||+++.+ +.++..+|+..+|
T Consensus 32 ~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g 96 (124)
T 1wh1_A 32 DKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN--REEAVALLTSEEN 96 (124)
T ss_dssp CCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCS--HHHHHHHHTCSSC
T ss_pred CcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC--HHHHHHHHHhCCC
Confidence 4689998754321 2467999999999999999 99999999999999975 7999999987554
No 330
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.62 E-value=8.1e-08 Score=94.01 Aligned_cols=75 Identities=24% Similarity=0.263 Sum_probs=61.1
Q ss_pred cEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH--------HHHhhcCCC
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--------YMEFLKANG 275 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--------~~~~~~~~~ 275 (359)
.+.|.+.|. ++|||.+.++. ..+++|..|.+||||+++| |++||+|++|||.++.+ +++....++
T Consensus 2 ~r~V~l~k~--~~lG~~i~gg~----~~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~ 74 (468)
T 3shw_A 2 MKLVKFRKG--DSVGLRLAGGN----DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGE 74 (468)
T ss_dssp EEEEEEECC--SSCCEEEEEET----TTEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTS
T ss_pred ceEEEEecC--CccceEEEccC----cCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCC
Confidence 467888885 58999998542 2578999999999999999 99999999999999865 344444677
Q ss_pred eEEEEEEeCc
Q psy5022 276 IEDHSFVKEM 285 (359)
Q Consensus 276 ~v~l~v~~~~ 285 (359)
.++|.+.++.
T Consensus 75 ~v~L~V~r~g 84 (468)
T 3shw_A 75 EVTILAQKKK 84 (468)
T ss_dssp EEEEEEEECH
T ss_pred EEEEEEEECC
Confidence 8999998864
No 331
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.04 E-value=4.4e-09 Score=83.28 Aligned_cols=61 Identities=34% Similarity=0.497 Sum_probs=50.2
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhh-cCCCCCCCEEEEECCccHHH
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAAR-CGQLNIGDQIIAVNGVSLVA 266 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~-~G~L~~GD~Il~Vng~~v~~ 266 (359)
..+++.+.|..+++|||.+.++. . ...+++|..|.++|||++ +| |++||+|++|||.++.+
T Consensus 27 ~~~~v~l~k~~~~glG~~l~~g~-~-~~~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~ 88 (112)
T 2lob_A 27 GIRKVLLLKEDHEGLGISITGGK-E-HGVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRD 88 (112)
Confidence 45678888887789999998532 1 124679999999999999 78 99999999999999955
No 332
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.61 E-value=5.8e-08 Score=78.17 Aligned_cols=81 Identities=21% Similarity=0.286 Sum_probs=58.8
Q ss_pred EEEEeeCCC-CCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH---HHHhhc--CCCeEE
Q psy5022 205 KEVVVPKAK-GEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA---YMEFLK--ANGIED 278 (359)
Q Consensus 205 ~~v~l~r~~-~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~---~~~~~~--~~~~v~ 278 (359)
+++.+.+.. ...||+.+..........+++|..|.++|||+++|+|++||+|++|||.++.+ +...++ .+..+.
T Consensus 21 ~~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~ 100 (124)
T 1wh1_A 21 EEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTSEENKNFS 100 (124)
T ss_dssp CCBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHHHHHTCSSCCSCC
T ss_pred EEEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHHHHHHhCCCCEEE
Confidence 345555543 24799999753211123578999999999999999999999999999999866 333333 356788
Q ss_pred EEEEeCc
Q psy5022 279 HSFVKEM 285 (359)
Q Consensus 279 l~v~~~~ 285 (359)
|.|.|+.
T Consensus 101 l~v~R~g 107 (124)
T 1wh1_A 101 LLIARPE 107 (124)
T ss_dssp EEEEECS
T ss_pred EEEEECC
Confidence 8888764
No 333
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.60 E-value=1.3e-07 Score=76.38 Aligned_cols=77 Identities=19% Similarity=0.277 Sum_probs=58.7
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc--CCC
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK--ANG 275 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~--~~~ 275 (359)
..+.+.+.+.. .+|||.+.... ...+++|..|.++|||+++| |++||+|++|||.++.+ +...++ .+.
T Consensus 9 ~~r~v~l~~~~-~g~G~~l~~~~---~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 83 (128)
T 2kjd_A 9 RPRLCTMKKGP-SGYGFNLHSDK---SKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDE 83 (128)
T ss_dssp CCEEEEEECCS-SSCCEEEEECS---SSCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTCSE
T ss_pred CcEEEEEecCC-CcccEEEEecC---CCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 45678888886 58999998532 23478999999999999999 99999999999998765 333332 344
Q ss_pred eEEEEEEeC
Q psy5022 276 IEDHSFVKE 284 (359)
Q Consensus 276 ~v~l~v~~~ 284 (359)
.+.+.+.|+
T Consensus 84 ~~~l~v~R~ 92 (128)
T 2kjd_A 84 TKLLVVDRE 92 (128)
T ss_dssp EEEEEECHH
T ss_pred EEEEEEEeC
Confidence 566777764
No 334
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.59 E-value=6.9e-08 Score=94.54 Aligned_cols=61 Identities=20% Similarity=0.264 Sum_probs=54.8
Q ss_pred ccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 294 QEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
..+|||.+.++. ..+.+|.+|.+||||+++||++||+|++|||+++.++++++++.+|++.
T Consensus 10 ~~~lG~~i~gg~--~~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~ 70 (468)
T 3shw_A 10 GDSVGLRLAGGN--DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDL 70 (468)
T ss_dssp CSSCCEEEEEET--TTEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred CCccceEEEccC--cCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 478999997653 2478999999999999999999999999999999999999999999973
No 335
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.59 E-value=2e-07 Score=89.74 Aligned_cols=78 Identities=23% Similarity=0.213 Sum_probs=60.8
Q ss_pred ccccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----H---HHhhc
Q psy5022 201 KELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----Y---MEFLK 272 (359)
Q Consensus 201 ~~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~---~~~~~ 272 (359)
....+.+.+.+.. +||+++.++. ..+++|..|.+||||+++| |++||+|++|||.++.+ + ++...
T Consensus 7 ~~~~~~v~~~k~~--~lG~~i~gg~----~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~ 79 (391)
T 3tsz_A 7 RPSMKLVKFRKGD--SVGLRLAGGN----DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLP 79 (391)
T ss_dssp --CEEEEEEECCS--SCCEEEEEET----TTEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred CCCcEEEEeecCC--ceeEEEEecC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhc
Confidence 3455667787763 6999998542 2588999999999999999 99999999999999865 3 33334
Q ss_pred CCCeEEEEEEeCc
Q psy5022 273 ANGIEDHSFVKEM 285 (359)
Q Consensus 273 ~~~~v~l~v~~~~ 285 (359)
.+..++|++.++.
T Consensus 80 ~g~~v~l~v~r~~ 92 (391)
T 3tsz_A 80 KGEEVTILAQKKK 92 (391)
T ss_dssp TTSEEEEEEEECH
T ss_pred CCCeEEEEEeeCC
Confidence 6778999998764
No 336
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.58 E-value=2.9e-08 Score=76.97 Aligned_cols=78 Identities=24% Similarity=0.282 Sum_probs=58.4
Q ss_pred EEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCCCeEE
Q psy5022 205 KEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KANGIED 278 (359)
Q Consensus 205 ~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~~v~ 278 (359)
..+.+.+.. .+|||.+.++.. ...+++|..|.++|||+++|+|++||+|++|||.++.+ ++..+ ..+..++
T Consensus 13 ~~v~l~~~~-~g~G~~~~~~~~--~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~ 89 (103)
T 1wfv_A 13 FTVDMEKGA-KGFGFSIRGGRE--YKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVR 89 (103)
T ss_dssp EECCEECCT-TSSSBCCEEETT--TTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEEC
T ss_pred EEEEEecCC-CcCCEEEecccc--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 456677765 479999985321 12368899999999999999999999999999999865 33333 2456788
Q ss_pred EEEEeCc
Q psy5022 279 HSFVKEM 285 (359)
Q Consensus 279 l~v~~~~ 285 (359)
|++.|+.
T Consensus 90 l~v~R~~ 96 (103)
T 1wfv_A 90 LLLKRGT 96 (103)
T ss_dssp EEEECTT
T ss_pred EEEEECC
Confidence 9888753
No 337
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.57 E-value=5.4e-08 Score=78.59 Aligned_cols=81 Identities=32% Similarity=0.375 Sum_probs=63.1
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCC-CCCCEEEEECCccHHH-----HHHhhc--C
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQL-NIGDQIIAVNGVSLVA-----YMEFLK--A 273 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L-~~GD~Il~Vng~~v~~-----~~~~~~--~ 273 (359)
...+++.+.+....+||+.+.... ...+++|..|.++|||+++| | ++||+|++|||.++.+ +...++ .
T Consensus 7 ~~~~~v~l~~~~~~glG~~~~~~~---~~~~~~V~~V~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 82 (127)
T 1b8q_A 7 PNVISVRLFKRKVGGLGFLVKERV---SKPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGIA 82 (127)
T ss_dssp CCSEEEEEECTTTSCCSCCEEECT---TSSCEEECCCSSSSSHHHHS-SCCTTTCCCEETTEECSSSCHHHHHHHHHSCC
T ss_pred CceEEEEEEeCCCCcEeEEEEecC---CCCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 456789998887679999998532 13478999999999999999 7 9999999999998755 333332 3
Q ss_pred CCeEEEEEEeCcc
Q psy5022 274 NGIEDHSFVKEMD 286 (359)
Q Consensus 274 ~~~v~l~v~~~~~ 286 (359)
+..+.|.+.|+..
T Consensus 83 g~~v~l~v~R~g~ 95 (127)
T 1b8q_A 83 SETHVVLILRGPE 95 (127)
T ss_dssp SSCEEEEEECCCC
T ss_pred CCeEEEEEEeCCc
Confidence 5689999988654
No 338
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.56 E-value=1.4e-07 Score=79.85 Aligned_cols=62 Identities=18% Similarity=0.264 Sum_probs=52.4
Q ss_pred ccccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 294 QEIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 294 ~~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
...+|+.+... ..+.+|..|.++|||+++||++||+|++|||+++.+++++....+++...|
T Consensus 15 ~~~lG~~~~~~---~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~ 76 (166)
T 1w9e_A 15 DGKIGLRLKSI---DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFG 76 (166)
T ss_dssp TSCCSEEEEEE---TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred CCcEeEEEEeC---CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 45789988753 246799999999999999999999999999999999988677788876554
No 339
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.54 E-value=4.1e-07 Score=69.68 Aligned_cols=74 Identities=14% Similarity=0.120 Sum_probs=56.2
Q ss_pred ccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH--------HHHhhcCC
Q psy5022 203 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--------YMEFLKAN 274 (359)
Q Consensus 203 ~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--------~~~~~~~~ 274 (359)
..+++.+.|.. .+|||.+.... .+++|..|.+ +|+++| |++||+|++|||+++.+ +++....+
T Consensus 10 ~~~~v~l~~~~-~g~G~~i~~~~-----~Gv~V~~v~~--~a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g 80 (96)
T 1ujv_A 10 ELMTLTIVKGA-QGFGFTIADSP-----TGQRVKQILD--IQGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDCPIG 80 (96)
T ss_dssp CCEEEEEECCS-SSSSEEEEEET-----TEEEEEEESC--GGGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHSCTT
T ss_pred eEEEEEEEeCC-CceeEEEEcCC-----CCEEEEEEec--ccccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCC
Confidence 34568888876 58999997432 2578999988 378889 99999999999999854 34443346
Q ss_pred CeEEEEEEeCc
Q psy5022 275 GIEDHSFVKEM 285 (359)
Q Consensus 275 ~~v~l~v~~~~ 285 (359)
..++|+|.|+.
T Consensus 81 ~~v~l~v~R~g 91 (96)
T 1ujv_A 81 SETSLIIHRGS 91 (96)
T ss_dssp SEEEEEEECCS
T ss_pred CEEEEEEEECC
Confidence 78999998753
No 340
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.53 E-value=5.7e-08 Score=75.07 Aligned_cols=73 Identities=15% Similarity=0.215 Sum_probs=55.1
Q ss_pred cEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc-CCCeE
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK-ANGIE 277 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~-~~~~v 277 (359)
...+.+.+.. .+|||.+... .+++|..|.++|||+++| |++||+|++|||.++.+ +...++ .++.+
T Consensus 16 ~~~v~l~~~~-~g~G~~~~~~------~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v 87 (100)
T 1whd_A 16 KLQITIRRGK-DGFGFTICCD------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEI 87 (100)
T ss_dssp EEEEEEECCS-SSSSCBCCCS------SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEE
T ss_pred eEEEEEECCC-CeeeEEEeCC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 3457777775 4789877632 357888999999999999 99999999999999873 333332 34568
Q ss_pred EEEEEeC
Q psy5022 278 DHSFVKE 284 (359)
Q Consensus 278 ~l~v~~~ 284 (359)
.|+|.|.
T Consensus 88 ~l~v~R~ 94 (100)
T 1whd_A 88 ILLVWRV 94 (100)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 8888775
No 341
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.52 E-value=2.5e-08 Score=80.55 Aligned_cols=81 Identities=22% Similarity=0.386 Sum_probs=59.8
Q ss_pred cccEEEEeeCCCCCccceEEEec-------------------CCC-C------cCCcEEEEEECCCChhhhcCCCCCCCE
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVES-------------------GWG-S------MLPTVVIANLAPAGAAARCGQLNIGDQ 255 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~-------------------~~g-~------~~~~~~V~~v~~~s~A~~~G~L~~GD~ 255 (359)
...++|.|.|.. .+|||++.+. .++ . ...+++|..|.++|||+++| |++||+
T Consensus 7 ~~~r~v~l~r~~-~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~ 84 (126)
T 2yuy_A 7 GGPKTVTLKRTS-QGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDR 84 (126)
T ss_dssp SSCCCEEEECCS-SSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCC
T ss_pred CCCEEEEEEECC-CCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCE
Confidence 345679999886 5899999641 111 0 11357899999999999999 999999
Q ss_pred EEEECCccHHH-----HHHhhc-CCCeEEEEEEeC
Q psy5022 256 IIAVNGVSLVA-----YMEFLK-ANGIEDHSFVKE 284 (359)
Q Consensus 256 Il~Vng~~v~~-----~~~~~~-~~~~v~l~v~~~ 284 (359)
|++|||+++.+ +...++ .+..++|.|.|.
T Consensus 85 I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~ 119 (126)
T 2yuy_A 85 IIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPK 119 (126)
T ss_dssp CCEETTEECSSCCHHHHHHHHHTCTTEEEEECCCC
T ss_pred EEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEEC
Confidence 99999999862 333333 366888888765
No 342
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.46 E-value=6.9e-07 Score=65.65 Aligned_cols=69 Identities=19% Similarity=0.367 Sum_probs=51.4
Q ss_pred EeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHH--H---HHHhhc-CCCeEEEEE
Q psy5022 208 VVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV--A---YMEFLK-ANGIEDHSF 281 (359)
Q Consensus 208 ~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~--~---~~~~~~-~~~~v~l~v 281 (359)
.+.+...+.||+.+. .+++|..|.++|||+++|+|++||+|++|||.++. + +...+. .++.+.+++
T Consensus 6 ~~~~~~~~~~g~~~~--------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v 77 (81)
T 2rcz_A 6 LVKSRKNEEYGLRLA--------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVV 77 (81)
T ss_dssp EECCSTTCCCCEEEE--------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEE
T ss_pred EEECCCCCCCCEEEe--------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEE
Confidence 344555668888775 25789999999999999999999999999999988 3 333332 234778887
Q ss_pred EeC
Q psy5022 282 VKE 284 (359)
Q Consensus 282 ~~~ 284 (359)
.|+
T Consensus 78 ~R~ 80 (81)
T 2rcz_A 78 QRD 80 (81)
T ss_dssp EC-
T ss_pred EeC
Confidence 653
No 343
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.46 E-value=5e-07 Score=78.19 Aligned_cols=67 Identities=25% Similarity=0.363 Sum_probs=52.0
Q ss_pred CccceEEEecCC--CC----cCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhh-cCCCeEEEEEE
Q psy5022 215 EILGVVIVESGW--GS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFL-KANGIEDHSFV 282 (359)
Q Consensus 215 ~~lG~~i~~~~~--g~----~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~-~~~~~v~l~v~ 282 (359)
.+|||.|.++.. |. ...+++|..|.++|||++ | |++||+|++|||+++.+ .+..+ ..+..+.|.|.
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~ 79 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIV 79 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 479999997532 21 235799999999999999 9 99999999999999876 23222 23458999998
Q ss_pred e
Q psy5022 283 K 283 (359)
Q Consensus 283 ~ 283 (359)
|
T Consensus 80 r 80 (195)
T 2qbw_A 80 R 80 (195)
T ss_dssp E
T ss_pred E
Confidence 8
No 344
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.44 E-value=5e-08 Score=75.82 Aligned_cols=75 Identities=23% Similarity=0.234 Sum_probs=54.8
Q ss_pred EEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhcC-CCeEEE
Q psy5022 206 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLKA-NGIEDH 279 (359)
Q Consensus 206 ~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~~-~~~v~l 279 (359)
++.+.. ...|||.+..+.. ...+++|..|.++|||+++| |++||+|++|||.++.+ +...++. +..++|
T Consensus 8 ~v~~~~--~~~lG~~l~~g~~--~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l 82 (103)
T 1v5l_A 8 NVVLPG--PAPWGFRLSGGID--FNQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCL 82 (103)
T ss_dssp CCEEES--SSCCSBCCEEETT--TTEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEEC
T ss_pred EEEEcC--CCCcCEEEecccc--CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 344443 3589999875321 11367889999999999999 99999999999998765 3333332 678888
Q ss_pred EEEeCc
Q psy5022 280 SFVKEM 285 (359)
Q Consensus 280 ~v~~~~ 285 (359)
.+.|+.
T Consensus 83 ~v~R~g 88 (103)
T 1v5l_A 83 KIDRAE 88 (103)
T ss_dssp EECCCT
T ss_pred EEEECC
Confidence 888753
No 345
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.42 E-value=7.7e-07 Score=70.92 Aligned_cols=79 Identities=14% Similarity=0.203 Sum_probs=54.1
Q ss_pred EEeeCCCCCccceEEEecC-CCCcCCcEEEEEECC--CChhhhcCCCCCCCEEEEECCccHHH-----HHHhhcC-CCeE
Q psy5022 207 VVVPKAKGEILGVVIVESG-WGSMLPTVVIANLAP--AGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLKA-NGIE 277 (359)
Q Consensus 207 v~l~r~~~~~lG~~i~~~~-~g~~~~~~~V~~v~~--~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~~-~~~v 277 (359)
+.+.+...+.+||.+.-.. ......+++|..|.+ ++||+++| |++||+|++|||.++.+ +...+.. +..+
T Consensus 19 ~~~~~~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v 97 (118)
T 2yub_A 19 ISMPATTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTL 97 (118)
T ss_dssp EEECSCSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCE
T ss_pred eccCCccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHhCCCEE
Confidence 4444443345676665211 111235789999999 99999999 99999999999998865 3333322 5678
Q ss_pred EEEEEeCcc
Q psy5022 278 DHSFVKEMD 286 (359)
Q Consensus 278 ~l~v~~~~~ 286 (359)
.|+|.|+..
T Consensus 98 ~l~v~R~g~ 106 (118)
T 2yub_A 98 QLLIEHDPV 106 (118)
T ss_dssp EEEEEECSS
T ss_pred EEEEEECCE
Confidence 899887643
No 346
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.41 E-value=1.1e-07 Score=75.09 Aligned_cols=73 Identities=22% Similarity=0.297 Sum_probs=54.8
Q ss_pred cEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHH--H---HHHhhc--CCCe
Q psy5022 204 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV--A---YMEFLK--ANGI 276 (359)
Q Consensus 204 ~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~--~---~~~~~~--~~~~ 276 (359)
.+.|.|.|. +..|||.+.+. .+++|..|.+++||+++| |++||+|++|||.++. + +...++ .+..
T Consensus 16 ~r~v~l~~~-~~~~G~~l~~~------~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~ 87 (111)
T 1vae_A 16 PRGIHFTVE-EGDLGFTLRGN------TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEE 87 (111)
T ss_dssp CCCCCEECC-SSCCSCCEESS------SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSE
T ss_pred CeEEEEEcC-CCcccEEEeCC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCce
Confidence 456778886 46899988632 256888999999999999 9999999999999987 3 333332 2345
Q ss_pred EEEEEEeC
Q psy5022 277 EDHSFVKE 284 (359)
Q Consensus 277 v~l~v~~~ 284 (359)
+.|+|.+.
T Consensus 88 v~l~V~~~ 95 (111)
T 1vae_A 88 VEMKVVSL 95 (111)
T ss_dssp ECEEEECE
T ss_pred EEEEEEec
Confidence 88888753
No 347
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.40 E-value=4e-07 Score=69.66 Aligned_cols=47 Identities=11% Similarity=0.217 Sum_probs=41.1
Q ss_pred CcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 310 QKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 310 ~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
..+|.+|.++|||+++||++||+|++|||+++.+ ++++...|..+.+
T Consensus 3 ~p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~d~~~~l~~~~~ 49 (95)
T 3id1_A 3 RPVVGEIAANSIAAEAQIAPGTELKAVDGIETPD--WDAVRLQLVDKIG 49 (95)
T ss_dssp CCBEEEECTTSHHHHTTCCTTCEEEEETTEECSS--HHHHHHHHHHTTT
T ss_pred CCEEEeeCCCCHHHHcCCCCCCEEEEECCEECCC--HHHHHHHHHHhcC
Confidence 3579999999999999999999999999999976 5888888876543
No 348
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.38 E-value=1.6e-06 Score=65.51 Aligned_cols=72 Identities=21% Similarity=0.370 Sum_probs=52.2
Q ss_pred EEEeeC-CCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHH--H---HHHhhc-CCCeEE
Q psy5022 206 EVVVPK-AKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV--A---YMEFLK-ANGIED 278 (359)
Q Consensus 206 ~v~l~r-~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~--~---~~~~~~-~~~~v~ 278 (359)
.+.+.+ ...+.||+.+. .+++|..|.++|||+++|+|++||+|++|||.++. + +...+. .++.+.
T Consensus 5 ~v~~~~~~~~~~~g~~~~--------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~ 76 (92)
T 3cyy_A 5 KVTLVKSAKNEEYGLRLA--------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLK 76 (92)
T ss_dssp EEEEECSSTTSCCCEEEE--------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEE
T ss_pred EEEEEeCCCCCCCCEEEe--------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEE
Confidence 344444 33467887765 26789999999999999999999999999999988 3 333332 234788
Q ss_pred EEEEeCc
Q psy5022 279 HSFVKEM 285 (359)
Q Consensus 279 l~v~~~~ 285 (359)
|.+.|+.
T Consensus 77 l~v~r~g 83 (92)
T 3cyy_A 77 MVVQRDE 83 (92)
T ss_dssp EEEEC--
T ss_pred EEEEeCC
Confidence 8887653
No 349
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.36 E-value=1.3e-07 Score=91.09 Aligned_cols=64 Identities=23% Similarity=0.369 Sum_probs=53.5
Q ss_pred cccccCcEEeccccc--ccCcEEEEEcCCChhhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 293 SQEIFGDELQMFAKK--ELQKEICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 293 ~~~~~G~~~~~~~~~--~~~~~I~~v~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
..++|||.+.+...+ ..+.+|.+|.+||||+++| |++||+|++|||+++.++++++++.+|+..
T Consensus 214 ~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~ 280 (388)
T 3suz_A 214 KGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGL 280 (388)
T ss_dssp SSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTC
T ss_pred CCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhc
Confidence 356899988763321 2246899999999999998 999999999999999999999999999875
No 350
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.36 E-value=1.1e-06 Score=67.84 Aligned_cols=55 Identities=18% Similarity=0.239 Sum_probs=45.4
Q ss_pred CCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH------HHHhhcCCCeEEEEEEeCcc
Q psy5022 230 LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA------YMEFLKANGIEDHSFVKEMD 286 (359)
Q Consensus 230 ~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~------~~~~~~~~~~v~l~v~~~~~ 286 (359)
..+++|..|.++|||+. | |++||+|++|||+++.+ ++.....+..+.+++.|+..
T Consensus 6 ~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~ 66 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDK 66 (100)
T ss_dssp CCCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEETTE
T ss_pred CCCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 35789999999999995 8 99999999999999876 44444457789999988754
No 351
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.34 E-value=3.7e-07 Score=68.96 Aligned_cols=47 Identities=19% Similarity=0.372 Sum_probs=40.9
Q ss_pred CcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 310 QKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 310 ~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
+.+|..|.++|||+++||++||+|++|||+++.+ +.++...|+.+.|
T Consensus 5 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g 51 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQ--WVTFVMLVRDNPG 51 (91)
T ss_dssp -CBCSEECTTSHHHHTTCCTTCEEEEETTEECCC--HHHHHHHHHHCTT
T ss_pred CeEEEEECCCChHHhcCCCCCCEEEEECCeEcCC--HHHHHHHHhcCCC
Confidence 3568899999999999999999999999999976 5899988887654
No 352
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.33 E-value=6.7e-07 Score=68.39 Aligned_cols=53 Identities=15% Similarity=0.133 Sum_probs=43.3
Q ss_pred cEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH------HHHhhcCCCeEEEEEEeCc
Q psy5022 232 TVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA------YMEFLKANGIEDHSFVKEM 285 (359)
Q Consensus 232 ~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~------~~~~~~~~~~v~l~v~~~~ 285 (359)
..+|..|.++|||+++| |++||+|++|||+++.+ .+.....++.+.+++.|+.
T Consensus 3 ~p~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R~g 61 (95)
T 3id1_A 3 RPVVGEIAANSIAAEAQ-IAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFG 61 (95)
T ss_dssp CCBEEEECTTSHHHHTT-CCTTCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEECTT
T ss_pred CCEEEeeCCCCHHHHcC-CCCCCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEECC
Confidence 35788999999999999 99999999999998876 3333334468999998865
No 353
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.31 E-value=1.2e-06 Score=71.37 Aligned_cols=45 Identities=11% Similarity=0.111 Sum_probs=40.1
Q ss_pred cCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 309 LQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 309 ~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
.+.+|.+|.++|||+ +||++||+|++|||+++.+ +.++..+|+..
T Consensus 57 ~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v~~--~~~l~~~l~~~ 101 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIAS--STDLQSALYNH 101 (134)
T ss_dssp SCEEEEECSTTSGGG-TTSCSSCEEEEETTEECCC--HHHHHHHHHHS
T ss_pred CCEEEEEECCCCchH-HCCCCCCEEEEECCEEcCC--HHHHHHHHHhC
Confidence 367899999999999 9999999999999999976 47888888765
No 354
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.30 E-value=5.3e-07 Score=67.71 Aligned_cols=45 Identities=11% Similarity=0.116 Sum_probs=37.5
Q ss_pred CcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 310 QKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 310 ~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+..|..+.++|||+++||++||+|++|||+++.+ +.++.++++..
T Consensus 20 G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~--~~d~~~~~~~~ 64 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTD--PNVMNTLFQSM 64 (87)
T ss_dssp EEEEEECSCHHHHHHTTCCTTCEEEEETTEETTC--HHHHHHHHHTG
T ss_pred EEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCC--HHHHHHHHHhc
Confidence 3457777788888999999999999999999976 47888887754
No 355
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.29 E-value=8.3e-07 Score=78.32 Aligned_cols=78 Identities=21% Similarity=0.252 Sum_probs=58.7
Q ss_pred cccEEEEeeCCCCCccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhcC-CC
Q psy5022 202 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLKA-NG 275 (359)
Q Consensus 202 ~~~~~v~l~r~~~~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~~-~~ 275 (359)
...+.+.|.+..+ +|||.+.... ...+++|..|.++|||+++| |+.||+|++|||.++.+ +...+.. +.
T Consensus 8 ~~~r~v~l~k~~~-glG~~l~~~~---~~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~ 82 (216)
T 2krg_A 8 LRPRLCTMKKGPS-GYGFNLHSDK---SKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGD 82 (216)
T ss_dssp CCCEEEEEECCSS-SSCEEECCCS---SSCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHHCS
T ss_pred cceEEEEEEeCCC-CceEEEEecC---CCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCC
Confidence 3456788988864 8999997432 23478999999999999999 99999999999999883 3332221 55
Q ss_pred eE-EEEEEeC
Q psy5022 276 IE-DHSFVKE 284 (359)
Q Consensus 276 ~v-~l~v~~~ 284 (359)
.+ .|++.|+
T Consensus 83 ~v~~l~V~R~ 92 (216)
T 2krg_A 83 ETKLLVVDRE 92 (216)
T ss_dssp EEEEEECCHH
T ss_pred eEEEEEEEEC
Confidence 67 7777654
No 356
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.29 E-value=2.1e-07 Score=70.66 Aligned_cols=44 Identities=18% Similarity=0.324 Sum_probs=39.3
Q ss_pred CcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 310 QKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 310 ~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
+.+|..|.++|||++ ||++||+|++|||+++.+ ++++..+|+..
T Consensus 2 Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~--~~~l~~~l~~~ 45 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-KIEVGDKIISADGKNYQS--AEKLIDYISSK 45 (91)
T ss_dssp CSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSS--HHHHHHHHSSC
T ss_pred ceEEEEECCCChHHH-cCCCCCEEEEECCEECCC--HHHHHHHHHcC
Confidence 457888999999999 999999999999999976 58999998876
No 357
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.28 E-value=6.7e-07 Score=67.11 Aligned_cols=53 Identities=15% Similarity=0.146 Sum_probs=43.6
Q ss_pred cEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH------HHHhhcCCCeEEEEEEeCc
Q psy5022 232 TVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA------YMEFLKANGIEDHSFVKEM 285 (359)
Q Consensus 232 ~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~------~~~~~~~~~~v~l~v~~~~ 285 (359)
++.|..+.|+|||+++| |++||+|++|||+++.+ ++...+.++.+++++.|+.
T Consensus 20 G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g 78 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDG 78 (87)
T ss_dssp EEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEETT
T ss_pred EEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 55677788889999999 99999999999999876 4455556778999998764
No 358
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.24 E-value=1.4e-06 Score=68.58 Aligned_cols=56 Identities=20% Similarity=0.243 Sum_probs=45.8
Q ss_pred CCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH---HHHhhcCCCeEEEEEEeCcc
Q psy5022 230 LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA---YMEFLKANGIEDHSFVKEMD 286 (359)
Q Consensus 230 ~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~---~~~~~~~~~~v~l~v~~~~~ 286 (359)
..+++|..|.++|||+++| |++||+|++|||.++.+ +...+..+..+.+++.|+..
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~l~~~~~v~l~v~R~g~ 92 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQNAEDVYEAVRTQSQLAVQIRRGRE 92 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECCSHHHHHHHHHHCSSEEEEEEETTE
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCHHHHHHHHhCCCeEEEEEEECCE
Confidence 3578999999999999999 99999999999999866 33444445678999988653
No 359
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.21 E-value=1e-06 Score=67.25 Aligned_cols=54 Identities=24% Similarity=0.392 Sum_probs=44.7
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH------HHHhhcCCCeEEEEEEeCcc
Q psy5022 231 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA------YMEFLKANGIEDHSFVKEMD 286 (359)
Q Consensus 231 ~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~------~~~~~~~~~~v~l~v~~~~~ 286 (359)
.+++|..|.++|||++ | |++||+|++|||.++.+ ++...+.+..++|++.|+..
T Consensus 5 ~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~ 64 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIRDRK 64 (94)
T ss_dssp CCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEETTE
T ss_pred CcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 3678889999999999 9 99999999999999865 44444467789999998754
No 360
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.21 E-value=3e-07 Score=69.75 Aligned_cols=53 Identities=17% Similarity=0.243 Sum_probs=42.4
Q ss_pred cEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH---H---HHhhcCCCeEEEEEEeCcc
Q psy5022 232 TVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA---Y---MEFLKANGIEDHSFVKEMD 286 (359)
Q Consensus 232 ~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~---~---~~~~~~~~~v~l~v~~~~~ 286 (359)
+++|..|.++|||++ | |++||+|++|||.++.+ + +.....+..++|++.|+..
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~ 60 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIEREEK 60 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSSHHHHHHHHSSCCSSCEECEEEESSSC
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCCHHHHHHHHHcCCCCCEEEEEEEECCE
Confidence 356778999999999 9 99999999999999865 3 3333356789999988653
No 361
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.21 E-value=1.8e-06 Score=66.56 Aligned_cols=45 Identities=13% Similarity=0.166 Sum_probs=39.8
Q ss_pred cCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 309 LQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 309 ~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
.+.+|..|.++|||++ ||++||+|++|||+++.+ ++++..+|...
T Consensus 7 ~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~--~~dl~~~l~~~ 51 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKS--SQEFIDYIHSK 51 (100)
T ss_dssp CCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSS--HHHHHHHHHTS
T ss_pred CCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCC--HHHHHHHHHhC
Confidence 3678999999999996 999999999999999976 58888888764
No 362
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.21 E-value=7.2e-07 Score=68.06 Aligned_cols=45 Identities=24% Similarity=0.293 Sum_probs=39.9
Q ss_pred cCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 309 LQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 309 ~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
.+.+|.+|.++|||++ ||++||+|++|||+++.+ ..++..+|+..
T Consensus 5 ~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~--~~~l~~~l~~~ 49 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINT--SEQIVSYVREK 49 (94)
T ss_dssp CCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCC--HHHHHHHHHHS
T ss_pred CcEEEEEECCCChHHh-CCCCCCEEEEECCEECCC--HHHHHHHHHhC
Confidence 3678889999999999 999999999999999976 58888888875
No 363
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.21 E-value=2.6e-06 Score=69.38 Aligned_cols=54 Identities=11% Similarity=0.085 Sum_probs=45.2
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH------HHHhhcCCCeEEEEEEeCcc
Q psy5022 231 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA------YMEFLKANGIEDHSFVKEMD 286 (359)
Q Consensus 231 ~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~------~~~~~~~~~~v~l~v~~~~~ 286 (359)
.+++|..|.++|||+ +| |++||+|++|||+++.+ .+...+.++.+++++.|+..
T Consensus 57 ~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~ 116 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRNGK 116 (134)
T ss_dssp SCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCCHHHHHHHHHHSSTTCEEEEEEEETTE
T ss_pred CCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCCHHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 578999999999999 99 99999999999999866 34444457789999988653
No 364
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.15 E-value=2.4e-06 Score=67.22 Aligned_cols=45 Identities=29% Similarity=0.373 Sum_probs=40.2
Q ss_pred cCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 309 LQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 309 ~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
.+.+|..|.++|||+++||++||+|++|||+++.+ ..++..+|+.
T Consensus 35 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~ 79 (113)
T 2pzd_A 35 HGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN--AEDVYEAVRT 79 (113)
T ss_dssp SCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCS--HHHHHHHHHH
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCC--HHHHHHHHhC
Confidence 36789999999999999999999999999999975 5888888875
No 365
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.14 E-value=2.3e-06 Score=67.31 Aligned_cols=55 Identities=25% Similarity=0.340 Sum_probs=45.3
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH---HHHhhcCCCeEEEEEEeCcc
Q psy5022 231 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA---YMEFLKANGIEDHSFVKEMD 286 (359)
Q Consensus 231 ~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~---~~~~~~~~~~v~l~v~~~~~ 286 (359)
.+++|..|.++|||+++| |++||+|++|||.++.+ +...+..+..+.+.+.|+..
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~l~~g~~v~l~v~R~g~ 92 (112)
T 2p3w_A 35 SGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVDSSELQEAVLTESPLLLEVRRGND 92 (112)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHHHHHHHHHHCSSEEEEEEETTE
T ss_pred CCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCCHHHHHHHHhCCCeEEEEEEECCE
Confidence 478999999999999999 99999999999999866 33344456678899887643
No 366
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.13 E-value=4.4e-06 Score=80.28 Aligned_cols=63 Identities=21% Similarity=0.288 Sum_probs=51.3
Q ss_pred ccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 296 IFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 296 ~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
++|+.+........+.+|.+|.++|||+++||++||+|++|||+++.+++.+++..+|+...|
T Consensus 86 giG~~~~~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g 148 (388)
T 1fc6_A 86 GVGLEITYDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEAD 148 (388)
T ss_dssp BCSEEEEECTTCSSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCBSTT
T ss_pred EEEEEEEEeecCCCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 567776532011236789999999999999999999999999999999988999999986554
No 367
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.13 E-value=2e-06 Score=75.49 Aligned_cols=41 Identities=12% Similarity=0.074 Sum_probs=36.2
Q ss_pred ccccCcEEEEEcCCChhhcCCCCCC-CEEEEECCEECCCCCH
Q psy5022 306 KKELQKEICSLLRGGIAERGGVRVG-HRIIEINNQSVVAVPH 346 (359)
Q Consensus 306 ~~~~~~~I~~v~~gs~A~~~gL~~G-D~Il~INg~~v~~~~~ 346 (359)
....+.+|.+|.++|||+++||++| |+|++|||+++.+++.
T Consensus 13 ~~~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~ 54 (209)
T 3rle_A 13 GGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDND 54 (209)
T ss_dssp SSSEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSS
T ss_pred CCCCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHH
Confidence 3445679999999999999999999 9999999999998753
No 368
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.12 E-value=3.1e-06 Score=65.82 Aligned_cols=53 Identities=15% Similarity=0.146 Sum_probs=43.1
Q ss_pred cEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH------HHHhhcCCCeEEEEEEeCc
Q psy5022 232 TVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA------YMEFLKANGIEDHSFVKEM 285 (359)
Q Consensus 232 ~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~------~~~~~~~~~~v~l~v~~~~ 285 (359)
++.|....|+|||+++| |++||+|++|||+++.+ ++...+.++.++|++.|+.
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g 96 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDG 96 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEETT
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEECC
Confidence 34566678888899999 99999999999999876 4555566778999998764
No 369
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.03 E-value=4e-06 Score=65.19 Aligned_cols=43 Identities=12% Similarity=0.135 Sum_probs=34.9
Q ss_pred cEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 311 KEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 311 ~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
..|....++|||+++||++||+|++|||+++.++ .++..+++.
T Consensus 39 ~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~--~d~~~~~~~ 81 (105)
T 2i4s_A 39 YRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDP--NVMNTLFQS 81 (105)
T ss_dssp EEEEECSCTHHHHHHTCCTTCEEEEETTEETTST--THHHHHHHH
T ss_pred EEEecCCCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHh
Confidence 3466666777789999999999999999999886 566666664
No 370
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.02 E-value=5.7e-06 Score=64.99 Aligned_cols=44 Identities=16% Similarity=0.328 Sum_probs=39.1
Q ss_pred cCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Q psy5022 309 LQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLA 354 (359)
Q Consensus 309 ~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~ 354 (359)
.+.+|..|.++|||+++||++||+|++|||+++.+ ..++...|+
T Consensus 35 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~ 78 (112)
T 2p3w_A 35 SGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVD--SSELQEAVL 78 (112)
T ss_dssp SSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCS--HHHHHHHHH
T ss_pred CCeEEEEECCCChHHHCCCCCCCEEEEECCEECCC--HHHHHHHHh
Confidence 36789999999999999999999999999999975 578887774
No 371
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.01 E-value=3.4e-06 Score=63.59 Aligned_cols=52 Identities=25% Similarity=0.388 Sum_probs=42.0
Q ss_pred EEEEEECCCChhhhcCCCCCCCEEEEECCccHHH------HHHhhcCCCeEEEEEEeCcc
Q psy5022 233 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA------YMEFLKANGIEDHSFVKEMD 286 (359)
Q Consensus 233 ~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~------~~~~~~~~~~v~l~v~~~~~ 286 (359)
++|..|.++|||+++| |+.||+|++|||.++.+ .+.. ..+..+.+++.|+..
T Consensus 6 ~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~l~~-~~g~~v~l~v~R~g~ 63 (91)
T 2zpm_A 6 PVLENVQPNSAASXAG-LQAGDRIVXVDGQPLTQWVTFVMLVRD-NPGXSLALEIERQGS 63 (91)
T ss_dssp CBCSEECTTSHHHHTT-CCTTCEEEEETTEECCCHHHHHHHHHH-CTTCCEEEEEEETTE
T ss_pred eEEEEECCCChHHhcC-CCCCCEEEEECCeEcCCHHHHHHHHhc-CCCCeEEEEEEECCe
Confidence 4678899999999999 99999999999998866 3333 245678999988653
No 372
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.92 E-value=1.7e-05 Score=63.77 Aligned_cols=44 Identities=23% Similarity=0.142 Sum_probs=39.1
Q ss_pred cCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 309 LQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 309 ~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
.+.+|..|.++|||+++ |++||+|++|||+++.+ +.++...++.
T Consensus 25 ~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~--~~dl~~~l~~ 68 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSN--LTTYSAALKT 68 (125)
T ss_dssp CCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSS--HHHHHHHHTT
T ss_pred CceEEEEECCCChHHHh-cCCCCEEEEECCEEcCC--HHHHHHHHHh
Confidence 36789999999999999 99999999999999976 4888888874
No 373
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.88 E-value=1.8e-05 Score=73.94 Aligned_cols=48 Identities=19% Similarity=0.318 Sum_probs=42.2
Q ss_pred cCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-ccC
Q psy5022 309 LQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT-SVG 358 (359)
Q Consensus 309 ~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~-s~g 358 (359)
.+.+|.+|.++|||+++||++||+|++|||+++.+ ..++..+|+. .+|
T Consensus 244 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~--~~~l~~~l~~~~~g 292 (318)
T 1te0_A 244 QGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAIS--ALETMDQVAEIRPG 292 (318)
T ss_dssp CCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCC--HHHHHHHHHTSCTT
T ss_pred CcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCC--HHHHHHHHHhcCCC
Confidence 36789999999999999999999999999999976 5888888886 344
No 374
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.87 E-value=1.5e-05 Score=75.27 Aligned_cols=55 Identities=16% Similarity=0.323 Sum_probs=47.3
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH------HHHhhcCCCeEEEEEEeCcc
Q psy5022 231 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA------YMEFLKANGIEDHSFVKEMD 286 (359)
Q Consensus 231 ~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~------~~~~~~~~~~v~l~v~~~~~ 286 (359)
.+++|..|.++|||+++| |++||+|++|||+++.+ .+...+.++.++|++.|+.+
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~ 323 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGK 323 (345)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEECEETTEECSCHHHHHHHHHTSCTTCEEEEEEEETTE
T ss_pred ceEEEEEeccCChHHHcC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 478999999999999999 99999999999999876 44455568899999998754
No 375
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.84 E-value=4.3e-05 Score=71.44 Aligned_cols=54 Identities=17% Similarity=0.175 Sum_probs=45.3
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH------HHHhhcCCCeEEEEEEe-Cc
Q psy5022 231 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA------YMEFLKANGIEDHSFVK-EM 285 (359)
Q Consensus 231 ~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~------~~~~~~~~~~v~l~v~~-~~ 285 (359)
.+++|..|.++|||+++| |++||+|++|||+++.+ ++.....++.++|++.| +.
T Consensus 242 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~~g 302 (324)
T 1y8t_A 242 LGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSG 302 (324)
T ss_dssp SSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEECSSC
T ss_pred CceEEEEECCCChHHHcC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCC
Confidence 468999999999999999 99999999999999876 33333457789999988 54
No 376
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.82 E-value=2.8e-05 Score=62.43 Aligned_cols=53 Identities=17% Similarity=0.256 Sum_probs=43.3
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH------HHHhhcCCCeEEEEEEeCcc
Q psy5022 231 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA------YMEFLKANGIEDHSFVKEMD 286 (359)
Q Consensus 231 ~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~------~~~~~~~~~~v~l~v~~~~~ 286 (359)
.+++|..|.++|||+++ |++||+|++|||.++.+ .+.....++.+++++ |+..
T Consensus 25 ~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSNLTTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp CCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred CceEEEEECCCChHHHh--cCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 46889999999999998 99999999999998876 333334567899999 7655
No 377
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.81 E-value=3.2e-05 Score=72.32 Aligned_cols=57 Identities=19% Similarity=0.381 Sum_probs=46.0
Q ss_pred ccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 296 IFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 296 ~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
.+|+.+... ....+.+|..|.++|||+++||++||+|++|||+++.+ +.++..+|..
T Consensus 230 ~lGi~~~~~-~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~--~~~l~~~l~~ 286 (324)
T 1y8t_A 230 SLGVQVTND-KDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINS--ADALVAAVRS 286 (324)
T ss_dssp ECCEEEESC-SSSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCS--HHHHHHHHHT
T ss_pred ccceEeeec-cCCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCC--HHHHHHHHHh
Confidence 457776532 12346789999999999999999999999999999986 4788888865
No 378
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.80 E-value=1.7e-05 Score=74.99 Aligned_cols=46 Identities=20% Similarity=0.349 Sum_probs=41.6
Q ss_pred cCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy5022 309 LQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATS 356 (359)
Q Consensus 309 ~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~s 356 (359)
.+.+|.+|.++|||+++||++||+|++|||+++.+ ..++..+|+..
T Consensus 263 ~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~--~~~l~~~l~~~ 308 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNS--FAELRSRIATT 308 (345)
T ss_dssp SSEEEEEECTTSHHHHHTCCTTCEECEETTEECSC--HHHHHHHHHTS
T ss_pred ceEEEEEeccCChHHHcCCCCCCEEEEECCEECCC--HHHHHHHHHhc
Confidence 46799999999999999999999999999999975 58899888764
No 379
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.80 E-value=2.7e-05 Score=72.73 Aligned_cols=55 Identities=18% Similarity=0.419 Sum_probs=46.4
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH------HHHhhcCCCeEEEEEEeCcc
Q psy5022 231 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA------YMEFLKANGIEDHSFVKEMD 286 (359)
Q Consensus 231 ~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~------~~~~~~~~~~v~l~v~~~~~ 286 (359)
.+++|..|.++|||+++| |++||+|++|||+++.+ ++.....++.++|++.|+..
T Consensus 244 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~ 304 (318)
T 1te0_A 244 QGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDK 304 (318)
T ss_dssp CCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCCHHHHHHHHHTSCTTCEEEEEEESSSC
T ss_pred CcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 478999999999999999 99999999999999865 44444567789999998753
No 380
>2cy5_A Epidermal growth factor receptor pathway substrate 8-like protein 1; structural genomics, signal transduction, phosphorylation, PTB domain, NPPSFA; 1.90A {Mus musculus} SCOP: b.55.1.2 PDB: 2cy4_A
Probab=97.78 E-value=0.00035 Score=56.53 Aligned_cols=119 Identities=18% Similarity=0.173 Sum_probs=84.8
Q ss_pred cEEEEeeeEEEEeccCCChhhH-HHHHHHHHHHhCCCCCCCCCcEEEEEEECCeeEEEeCCccceeeccccceeeeEEec
Q psy5022 29 TLFRLKFLGSVQVDEDDPKCCK-RRVKKVMVEEAAPEGETQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADI 107 (359)
Q Consensus 29 v~f~~kylGs~~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~l~iS~~gi~~~~~~t~~~~~~~~l~~IS~~~~~ 107 (359)
-.|.+.=|=++.+....+...+ .+++++..-+++ +. -..++..|.|...+|.++|..|++.+.++||..|-.|...
T Consensus 9 ~qy~VeHL~Tf~l~~~~~~~~~~D~irkL~~ld~k--g~-iW~Q~m~L~v~~~~v~LlD~et~eelE~fpl~~I~~~~av 85 (140)
T 2cy5_A 9 SQYHVNHLVTFCLGEEDGVHTVEDASRKLAVMDSQ--GR-VWAQEMLLRVSPSQVTLLDPVSKEELESYPLDAIVRCDAV 85 (140)
T ss_dssp EEEEEEEEEEEECCTTSSCCSHHHHHHHHHHHHHT--TC-CCCEEEEEEECSSEEEEECTTTCCEEEEEEGGGEEEEEEE
T ss_pred ccEEEeeeEEEEeCCcCCcCCHHHHHHHHHhHHHc--CC-cccceeEEEECCCeEEEEccCccchhhcCChhhceecccc
Confidence 3799999999999776644444 355555432332 32 2456999999999999999999999999999999999744
Q ss_pred CCceEEeeecccccccCCCCCCCCCCCcceeeEeeccc--hhhHHhhcchhh
Q psy5022 108 GDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE--AQFIAQSIGQAF 157 (359)
Q Consensus 108 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~--a~~i~~~ig~af 157 (359)
-+.+. -+..+.++ .+.+++.+..=|+|+|.+ |+.|..-|..|.
T Consensus 86 ~~~~~--y~siLllv-----~q~~~~~~~~iH~FQc~ev~A~~v~~di~~al 130 (140)
T 2cy5_A 86 MPRGR--SRSLLLLV-----CQEPERAQPDVHFFQGLLLGAELIREDIQGAL 130 (140)
T ss_dssp CCSSC--SSCEEEEE-----ECCTTCSSCEEEEEEECTTHHHHHHHHHHHHH
T ss_pred CCccc--cCcEEEEE-----EecCCCCCccEEEEEeccccHHHHHHHHHHHH
Confidence 32111 12233444 344556678899999998 888888776653
No 381
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.77 E-value=1.2e-05 Score=77.37 Aligned_cols=42 Identities=26% Similarity=0.360 Sum_probs=36.3
Q ss_pred cEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 311 KEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 311 ~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
.+|..|.++|||+++||++||+|++|||+++.+++ +..+|+.
T Consensus 92 ~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~---~~~~l~~ 133 (403)
T 3k50_A 92 ALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV---ESELLQG 133 (403)
T ss_dssp EEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT---GGGGTSC
T ss_pred EEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh---HHHHhhC
Confidence 57999999999999999999999999999999874 4445543
No 382
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.77 E-value=2.2e-05 Score=75.62 Aligned_cols=69 Identities=19% Similarity=0.188 Sum_probs=47.9
Q ss_pred CccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH--HHHhhc-CCCeEEEEEEeC
Q psy5022 215 EILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA--YMEFLK-ANGIEDHSFVKE 284 (359)
Q Consensus 215 ~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~--~~~~~~-~~~~v~l~v~~~ 284 (359)
.++|+.+....-+...-.++|..|.++|||+++| |++||+|++|||+++.+ +...++ .+..++|++.|+
T Consensus 74 ~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~~~~~l~~~g~~v~l~v~R~ 145 (403)
T 3k50_A 74 YGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKVESELLQGSTRQLQIGVYKE 145 (403)
T ss_dssp CSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTTGGGGTSCSCEEEEEEEEEE
T ss_pred cceEEEEEEcCCCCcceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchhHHHHhhCCCCEEEEEEEeC
Confidence 4566666532211111136889999999999999 99999999999999876 222222 456788888764
No 383
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.74 E-value=4.1e-05 Score=71.71 Aligned_cols=55 Identities=20% Similarity=0.257 Sum_probs=47.1
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH---HHHhhcCCCeEEEEEEeCcc
Q psy5022 231 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA---YMEFLKANGIEDHSFVKEMD 286 (359)
Q Consensus 231 ~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~---~~~~~~~~~~v~l~v~~~~~ 286 (359)
.+++|..|.++|||+++| |++||+|++|||+++.+ +...+..++.+.|.+.|+..
T Consensus 256 ~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~~~~l~~~l~~~~~v~l~v~R~g~ 313 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQNAEDVYEAVRTQSQLAVQIRRGRE 313 (325)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHHHHHHHHTTCSSEEEEEEETTE
T ss_pred CCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCCHHHHHHHHhCCCeEEEEEEECCE
Confidence 478999999999999999 99999999999999876 55555566789999988753
No 384
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.72 E-value=5.1e-05 Score=76.77 Aligned_cols=66 Identities=18% Similarity=0.205 Sum_probs=52.2
Q ss_pred ccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhcCCCeEEEEEEeCcce
Q psy5022 216 ILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLKANGIEDHSFVKEMDY 287 (359)
Q Consensus 216 ~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~~~~~v~l~v~~~~~~ 287 (359)
.+|+.+... ..+++|..|.++|||+++| |++||+|++|||.++.. ++...+.++.++|+|.|+...
T Consensus 486 ~lG~~~~~~-----~~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 556 (597)
T 4fgm_A 486 NFGAKYKAS-----PQGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQATEQSVKRILERYIPGDTVTIHAFRRDEL 556 (597)
T ss_dssp CCSEEEEEE-----TTEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCTTTHHHHHTTCCTTCEEEEEEEETTEE
T ss_pred ccceEEecc-----CCeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECCHHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 567766532 1368999999999999999 99999999999998843 455556678999999987543
No 385
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.63 E-value=5.4e-05 Score=71.57 Aligned_cols=55 Identities=24% Similarity=0.404 Sum_probs=46.6
Q ss_pred CcEEEEEECCCChhhhcCCCCC-----------CCEEEEECCccHHH------HHHhhcCCCeEEEEEEeCcc
Q psy5022 231 PTVVIANLAPAGAAARCGQLNI-----------GDQIIAVNGVSLVA------YMEFLKANGIEDHSFVKEMD 286 (359)
Q Consensus 231 ~~~~V~~v~~~s~A~~~G~L~~-----------GD~Il~Vng~~v~~------~~~~~~~~~~v~l~v~~~~~ 286 (359)
.+++|..|.++|||+++| |++ ||+|++|||+++.+ .+...+.++.++|++.|+.+
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~ 322 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDH 322 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHTTCCTTCEEEEEEECSSS
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHHhCCCcCEEEEEEEECCE
Confidence 478999999999999999 999 99999999999876 33334457889999998754
No 386
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.60 E-value=5.1e-05 Score=71.06 Aligned_cols=45 Identities=29% Similarity=0.373 Sum_probs=40.5
Q ss_pred cCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 309 LQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 309 ~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
.+.+|.+|.++|||+++||++||+|++|||+++.+ .+++.++|+.
T Consensus 256 ~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~--~~~l~~~l~~ 300 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN--AEDVYEAVRT 300 (325)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCS--HHHHHHHHTT
T ss_pred CCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCC--HHHHHHHHhC
Confidence 36789999999999999999999999999999976 5888888875
No 387
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.53 E-value=0.00023 Score=68.18 Aligned_cols=69 Identities=25% Similarity=0.369 Sum_probs=51.3
Q ss_pred CccceEEEecCCCCcCCcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH-----HHHhhc--CCCeEEEEEEeCcc
Q psy5022 215 EILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA-----YMEFLK--ANGIEDHSFVKEMD 286 (359)
Q Consensus 215 ~~lG~~i~~~~~g~~~~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~-----~~~~~~--~~~~v~l~v~~~~~ 286 (359)
.++|+.+.... ....+++|..|.++|||+++| |++||+|++|||+++.+ +...++ .+..++|++.|...
T Consensus 85 ~giG~~~~~~~--~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 85 TGVGLEITYDG--GSGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGA 160 (388)
T ss_dssp BBCSEEEEECT--TCSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTE
T ss_pred EEEEEEEEEee--cCCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 36888876321 112468899999999999999 99999999999998865 233332 46678888887643
No 388
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.51 E-value=8.1e-05 Score=72.83 Aligned_cols=45 Identities=16% Similarity=0.273 Sum_probs=40.4
Q ss_pred cCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 309 LQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 309 ~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
.+.+|..|.++|||+++||++||+|++|||+++.++ .++...+..
T Consensus 282 ~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~--~~l~~~l~~ 326 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAGLKAGDIITQINDTKITQA--TQVKTTISL 326 (451)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHHT
T ss_pred ceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCH--HHHHHHHHh
Confidence 467999999999999999999999999999999864 788887775
No 389
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.50 E-value=0.00011 Score=71.73 Aligned_cols=45 Identities=20% Similarity=0.347 Sum_probs=39.9
Q ss_pred cCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 309 LQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 309 ~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
.+.+|.+|.++|||+++||++||+|++|||+++.++ .++...+..
T Consensus 263 ~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~--~~l~~~l~~ 307 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSF--AELRSRIAT 307 (436)
T ss_pred cceEEEEECCCChHHHCCCCCCCEEEEECCEECCCH--HHHHHHHHh
Confidence 367999999999999999999999999999999875 777777764
No 390
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.39 E-value=9.6e-05 Score=69.85 Aligned_cols=44 Identities=18% Similarity=0.259 Sum_probs=40.5
Q ss_pred CcEEEEEcCCChhhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 310 QKEICSLLRGGIAERGGVRV-----------GHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 310 ~~~I~~v~~gs~A~~~gL~~-----------GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
+.+|.+|.++|||+++||++ ||+|++|||+++.++ +++...|..
T Consensus 252 Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~ 306 (348)
T 3qo6_A 252 GVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQ 306 (348)
T ss_dssp SEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTT
T ss_pred eEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHh
Confidence 67899999999999999999 999999999999876 888888865
No 391
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.36 E-value=2.7e-05 Score=73.14 Aligned_cols=54 Identities=24% Similarity=0.328 Sum_probs=0.0
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH---HHHhhcCCCeEEEEEEeCc
Q psy5022 231 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA---YMEFLKANGIEDHSFVKEM 285 (359)
Q Consensus 231 ~~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~---~~~~~~~~~~v~l~v~~~~ 285 (359)
.+++|..|.++|||+++| |++||+|++|||+++.+ +...++.+..++|++.|+.
T Consensus 254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~l~~~~~v~l~v~R~g 310 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVVSANDVSDVIKRESTLNMVVRRGN 310 (332)
T ss_dssp ----------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcC-CCCCCEEEEECCEECCCHHHHHHHHhCCCeEEEEEEECC
Confidence 367899999999999999 99999999999999976 4444455667888888754
No 392
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.32 E-value=0.00022 Score=72.08 Aligned_cols=55 Identities=16% Similarity=0.309 Sum_probs=43.8
Q ss_pred cccCcEEecccccccCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 295 EIFGDELQMFAKKELQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 295 ~~~G~~~~~~~~~~~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
..+|+.+... ..+..|..|.+||||+++||++||+|++|||.+|.. .++.++|+.
T Consensus 485 ~~lG~~~~~~---~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v~~---~~l~~~l~~ 539 (597)
T 4fgm_A 485 VNFGAKYKAS---PQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQATE---QSVKRILER 539 (597)
T ss_dssp CCCSEEEEEE---TTEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCT---TTHHHHHTT
T ss_pred cccceEEecc---CCeEEEEEeCCCChHHHCCCCCCCEEEEECCEECCH---HHHHHHHHh
Confidence 4678877532 125789999999999999999999999999999953 566666664
No 393
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.23 E-value=4.6e-05 Score=71.58 Aligned_cols=45 Identities=29% Similarity=0.416 Sum_probs=0.0
Q ss_pred cCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 309 LQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 309 ~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
.+.+|.+|.++|||+++||++||+|++|||+++.++ +++..+|+.
T Consensus 254 ~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~ 298 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSA--NDVSDVIKR 298 (332)
T ss_dssp -----------------------------------------------
T ss_pred CceEEEEeccCCChHHcCCCCCCEEEEECCEECCCH--HHHHHHHhC
Confidence 367899999999999999999999999999999754 677776653
No 394
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.08 E-value=0.00014 Score=71.18 Aligned_cols=45 Identities=16% Similarity=0.313 Sum_probs=40.3
Q ss_pred cCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Q psy5022 309 LQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLAT 355 (359)
Q Consensus 309 ~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~~~~~~~v~~l~~ 355 (359)
.+.+|.+|.++|||+++||++||+|++|||+++.++ .++..+|..
T Consensus 286 ~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~--~~l~~~l~~ 330 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSF--AALRAQVGT 330 (448)
T ss_dssp CSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSS--HHHHHHTTS
T ss_pred CceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCH--HHHHHHHHh
Confidence 367899999999999999999999999999999886 788877765
No 395
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.57 E-value=0.0023 Score=68.77 Aligned_cols=57 Identities=18% Similarity=0.198 Sum_probs=45.8
Q ss_pred ccCcEEecccccccCcEEEEEcCC--------ChhhcCC--CCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy5022 296 IFGDELQMFAKKELQKEICSLLRG--------GIAERGG--VRVGHRIIEINNQSVVAVPHEKIVNLLATSVG 358 (359)
Q Consensus 296 ~~G~~~~~~~~~~~~~~I~~v~~g--------s~A~~~g--L~~GD~Il~INg~~v~~~~~~~~v~~l~~s~g 358 (359)
++|+.+.. ...+.+|..|.+| |||+++| |+ ||+|++|||+++.++. ++..+|+..+|
T Consensus 738 g~G~~~~~---~~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g 804 (1045)
T 1k32_A 738 RIACDFKL---DGDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAG 804 (1045)
T ss_dssp BCSEEEEE---ETTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTT
T ss_pred eecEEEEE---eCCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCC
Confidence 56666653 1235688999988 9999999 99 9999999999999874 78888887655
No 396
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=95.87 E-value=0.012 Score=63.06 Aligned_cols=64 Identities=14% Similarity=0.020 Sum_probs=48.2
Q ss_pred CccceEEEecCCCCcCCcEEEEEECCC--------ChhhhcCC-CCCCCEEEEECCccHHH------HHHhhcCCCeEEE
Q psy5022 215 EILGVVIVESGWGSMLPTVVIANLAPA--------GAAARCGQ-LNIGDQIIAVNGVSLVA------YMEFLKANGIEDH 279 (359)
Q Consensus 215 ~~lG~~i~~~~~g~~~~~~~V~~v~~~--------s~A~~~G~-L~~GD~Il~Vng~~v~~------~~~~~~~~~~v~l 279 (359)
.++|+.+.. ...+++|..+.++ |||+++|. |+ ||+|++|||+++.+ +++. ..+..++|
T Consensus 737 ~g~G~~~~~-----~~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~~~~~~~~~-~~g~~v~l 809 (1045)
T 1k32_A 737 GRIACDFKL-----DGDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGSNIYRVLSE-KAGTSARI 809 (1045)
T ss_dssp CBCSEEEEE-----ETTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTBCHHHHHHT-TTTSEEEE
T ss_pred ceecEEEEE-----eCCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchhhHHHhhcC-CCCCEEEE
Confidence 367777653 1246788899987 99999994 89 99999999998876 3333 34668888
Q ss_pred EEEeCc
Q psy5022 280 SFVKEM 285 (359)
Q Consensus 280 ~v~~~~ 285 (359)
+|.|..
T Consensus 810 ~v~r~~ 815 (1045)
T 1k32_A 810 RLSGKG 815 (1045)
T ss_dssp EEECSS
T ss_pred EEECCC
Confidence 888753
No 397
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=95.83 E-value=0.0084 Score=59.57 Aligned_cols=34 Identities=12% Similarity=0.072 Sum_probs=31.4
Q ss_pred cCcEEEEEcCCChhhcCCCCCCCEEEEECCEECCC
Q psy5022 309 LQKEICSLLRGGIAERGGVRVGHRIIEINNQSVVA 343 (359)
Q Consensus 309 ~~~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~~ 343 (359)
.+.+|.+|.++|||+++ |++||+|++|||++|.+
T Consensus 277 ~Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~ 310 (539)
T 4fln_A 277 EGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGC 310 (539)
T ss_dssp BCEEEEEECTTSGGGGT-CCTTCEEEEETTEECBS
T ss_pred CceeeecccCCChHHhC-ccCCCEEEEECCEEeCc
Confidence 47899999999999987 99999999999999965
No 398
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=90.22 E-value=0.59 Score=43.07 Aligned_cols=69 Identities=9% Similarity=0.116 Sum_probs=49.0
Q ss_pred CcEEEEEEECCeeEEEeCCccceeeccccceeeeEEecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccchhhH
Q psy5022 70 STEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDEAQFI 149 (359)
Q Consensus 70 ~~~v~l~iS~~gi~~~~~~t~~~~~~~~l~~IS~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~a~~i 149 (359)
..++.|-|+.+||.++|..|++++..++...|| ++-..+ .+.|.--. .+...+++|++..+.+|
T Consensus 241 ~~~~~LgV~~~Gv~v~~~~tk~~l~~~~~~~is-w~~s~~------~~~f~i~~---------~~~~~~~~~~t~q~~~i 304 (322)
T 4dxa_B 241 VIPVYVGVNIKGLHLLNMETKALLISLKYGCFM-WQLGDT------DTCFQIHS---------MENKMSFIVHTKQAGLV 304 (322)
T ss_dssp EEEEEEEECSSEEEEEETTTCCEEEEEETTSEE-EEECSS------TTEEEEEE---------SSSCCEEEEECTTHHHH
T ss_pred CCeEEEEEccCceEEEcCCCceeeeccccceeE-EeecCC------CCEEEEEE---------CCCCccEEEEeCcHHHH
Confidence 468999999999999999999999999999999 552211 12231110 01123788998778888
Q ss_pred Hhhcc
Q psy5022 150 AQSIG 154 (359)
Q Consensus 150 ~~~ig 154 (359)
+..|.
T Consensus 305 ~~li~ 309 (322)
T 4dxa_B 305 VKLLM 309 (322)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76553
No 399
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=83.17 E-value=2.6 Score=36.34 Aligned_cols=70 Identities=21% Similarity=0.132 Sum_probs=48.2
Q ss_pred CcEEEEEEECCeeEEEeCCccceeeccccceeeeEEecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccchhhH
Q psy5022 70 STEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDEAQFI 149 (359)
Q Consensus 70 ~~~v~l~iS~~gi~~~~~~t~~~~~~~~l~~IS~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~a~~i 149 (359)
..++.|-|+.+||.+++..|++++..++..+|.-++...+.|.+ -+. +... .+..|++..|.+|
T Consensus 142 ~~~~~LgI~~~GI~v~~~~tk~~l~~~~~~~I~~~~~~~~~f~I-------~~~------~~~~---~~~~~~T~q~~~I 205 (222)
T 4f7g_A 142 LVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTL-------DFG------DYQD---GYYSVQTTEGEQI 205 (222)
T ss_dssp EEEEEEEECSSEEEEECTTTCCEEEEEEGGGCCEEEECSSEEEE-------ECC------TTSS---SCEEEECSCHHHH
T ss_pred CCCEEEEEcCCcEEEEcCCCCceeEeccHHHeeeeccCCCEEEE-------EEC------Cccc---eEEEEECCcHHHH
Confidence 35899999999999999999999999987777655544442211 110 0111 2578888778888
Q ss_pred Hhhcch
Q psy5022 150 AQSIGQ 155 (359)
Q Consensus 150 ~~~ig~ 155 (359)
+..|..
T Consensus 206 ~~Li~~ 211 (222)
T 4f7g_A 206 AQLIAG 211 (222)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876653
No 400
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=81.21 E-value=4.3 Score=34.29 Aligned_cols=69 Identities=22% Similarity=0.135 Sum_probs=46.0
Q ss_pred CcEEEEEEECCeeEEEeCCccceeeccccceeeeEEecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccchhhH
Q psy5022 70 STEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDEAQFI 149 (359)
Q Consensus 70 ~~~v~l~iS~~gi~~~~~~t~~~~~~~~l~~IS~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~a~~i 149 (359)
..++.|-|+.+||.+++..+++++..++..+|.-++...+.|.+ .+. +.. . ....|++..|.+|
T Consensus 131 ~~~~~Lgi~~~Gi~~~~~~~~~~l~~~~~~~I~~~~~~~~~f~i-------~~~------~~~-~--~~~~~~t~~~~~i 194 (206)
T 1mix_A 131 LVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTL-------DFG------DYQ-D--GYYSVQTTEGEQI 194 (206)
T ss_dssp CEEEEEEECSSEEEEEETTTCCEEEEEEGGGCCEEEECSSEEEE-------ECG------GGS-S--SCEEEECSCHHHH
T ss_pred cCcEEEEEcccceEEeCCCCCceeeeeehhHeeecccCCCEEEE-------EeC------ccc-c--eEEEEECCcHHHH
Confidence 36899999999999999999999888887777655544432211 110 011 1 1467777668777
Q ss_pred Hhhcc
Q psy5022 150 AQSIG 154 (359)
Q Consensus 150 ~~~ig 154 (359)
+..|.
T Consensus 195 ~~Li~ 199 (206)
T 1mix_A 195 AQLIA 199 (206)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76553
No 401
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=72.17 E-value=9.4 Score=35.55 Aligned_cols=68 Identities=22% Similarity=0.134 Sum_probs=47.4
Q ss_pred cEEEEEEECCeeEEEeCCccceeeccccceeeeEEecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccchhhHH
Q psy5022 71 TEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDEAQFIA 150 (359)
Q Consensus 71 ~~v~l~iS~~gi~~~~~~t~~~~~~~~l~~IS~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~a~~i~ 150 (359)
.++.|-|+.+||.+++..+++++..++..+|.-++...+.|.+. +. +... ....|++..|.+|+
T Consensus 297 ~~~~LgI~~~GI~v~~~~~k~~l~~~~~~~I~~~~~~~~~f~I~-------~~------~~~~---~~~~~~T~~~~~I~ 360 (371)
T 3ivf_A 297 VPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTLD-------FG------DYQD---GYYSVQTTEGEQIA 360 (371)
T ss_dssp EEEEEEECSSEEEEEETTTCCEEEEEEGGGCCEEEEETTEEEEE-------CG------GGSS---SCEEEECSCHHHHH
T ss_pred ccEEEEEcCCcEEEEcCCCCceEEeeehhheeeeecCCCEEEEE-------EC------CccC---cEEEEECChHHHHH
Confidence 46899999999999999999999999888876555445433221 10 0111 35778887788887
Q ss_pred hhcc
Q psy5022 151 QSIG 154 (359)
Q Consensus 151 ~~ig 154 (359)
..|.
T Consensus 361 ~Li~ 364 (371)
T 3ivf_A 361 QLIA 364 (371)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 402
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=71.82 E-value=11 Score=38.18 Aligned_cols=71 Identities=11% Similarity=0.104 Sum_probs=47.2
Q ss_pred cEEEEEEECCeeEEEeCCccceeeccccceeeeEEecCC-ceEEeeecccccccCCCCCCCCCCCcceeeEeeccchhhH
Q psy5022 71 TEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGD-LVVLMARRRFVSQEADEPPKISRTPKMICHVFESDEAQFI 149 (359)
Q Consensus 71 ~~v~l~iS~~gi~~~~~~t~~~~~~~~l~~IS~~~~~~~-~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~a~~i 149 (359)
.++.|-|+..||.+++.+++.++ .++...|+-++...+ -. ..+.|. +. + . +-.+++|.+.+|..|
T Consensus 493 ~~l~LgVn~~GV~v~d~~~k~ll-~f~~~eI~~is~~~~~~~---~~~~ft-l~----~--~---~~~~~~F~T~~a~~I 558 (655)
T 3pvl_A 493 SDVIVAVNWTGVYFVDEQEQVLL-ELSFPEIMAVSSSRGTKM---MAPSFT-LA----T--I---KGDEYTFTSSNAEDI 558 (655)
T ss_dssp SEEEEEEETTEEEEECTTCCEEE-EEEGGGEEEEEEECCCSS---SCCEEE-EE----E--T---TSCEEEEECTTHHHH
T ss_pred ccEEEEEcCCceEEEcCCCceEE-EechhHceEEeccCcccc---cccEEE-EE----e--c---cCceEEEEcCCHHHH
Confidence 58999999999999999998554 788888777664331 00 001221 10 0 0 123799999988888
Q ss_pred Hhhcch
Q psy5022 150 AQSIGQ 155 (359)
Q Consensus 150 ~~~ig~ 155 (359)
+..|..
T Consensus 559 ~~LI~~ 564 (655)
T 3pvl_A 559 RDLVVT 564 (655)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876653
No 403
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=49.68 E-value=53 Score=32.19 Aligned_cols=69 Identities=13% Similarity=0.111 Sum_probs=49.3
Q ss_pred cEEEEEEECCeeEEEeCCccceeeccccceeeeEEe-cCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccchhhH
Q psy5022 71 TEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIAD-IGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDEAQFI 149 (359)
Q Consensus 71 ~~v~l~iS~~gi~~~~~~t~~~~~~~~l~~IS~~~~-~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~a~~i 149 (359)
.++.|-|+..||.+++..+++.+..++...|.-++. .++.|.+ .+ . ++ ..+|.+..|.+|
T Consensus 466 ~~l~LgV~~~GI~v~~~~~k~~l~~~~~~~I~~~~~~~~~~f~i-------~~--------~--~~--~l~f~T~qa~~i 526 (555)
T 3au4_A 466 QELWLGVSADAVSVYKRGEGRPLEVFQYEHILSFGAPLANTYKI-------VV--------D--ER--ELLFETSEVVDV 526 (555)
T ss_dssp SEEEEEECSSEEEEEETTCSSCSEEEEGGGEEEEEEEETTEEEE-------EE--------T--TE--EEEEECTTHHHH
T ss_pred ceEEEEEcccceEEECCCCCeeEEEEEhhheeeecCCCCCEEEE-------EE--------C--Cc--EEEEECCCHHHH
Confidence 589999999999999999999998999888865552 2332211 11 0 12 588888778888
Q ss_pred HhhcchhhH
Q psy5022 150 AQSIGQAFQ 158 (359)
Q Consensus 150 ~~~ig~af~ 158 (359)
+..|..-++
T Consensus 527 ~~LI~~Yi~ 535 (555)
T 3au4_A 527 AKLMKAYIS 535 (555)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 877765444
No 404
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=47.66 E-value=57 Score=29.24 Aligned_cols=40 Identities=13% Similarity=0.103 Sum_probs=31.0
Q ss_pred CcEEEEEEECCeeEEEeCCccc-eeeccccceeeeEEecCC
Q psy5022 70 STEVDLFISTEKIMVLNTDLKE-IMMDHALRTISYIADIGD 109 (359)
Q Consensus 70 ~~~v~l~iS~~gi~~~~~~t~~-~~~~~~l~~IS~~~~~~~ 109 (359)
..++.|-|+.+||.+++.+++. ++..++..+|.-.+...+
T Consensus 230 g~~~~LgI~~~Gi~v~~~~~k~~~~~~f~w~~I~~~~~~~~ 270 (314)
T 1h4r_A 230 GTELLLGVDALGLHIYDPENRLTPKISFPWNEIRNISYSDK 270 (314)
T ss_dssp CCEEEEEECSSEEEEECTTCSSSCSEEEEGGGEEEEEEETT
T ss_pred CCEEEEEEeCCceEEEeCCCCcccceEEecccceEEEeeCC
Confidence 4689999999999999999886 566777666655554444
No 405
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=38.33 E-value=34 Score=33.89 Aligned_cols=28 Identities=18% Similarity=0.374 Sum_probs=20.4
Q ss_pred cEEEEEcCCChhhcCCCCCCCEEEEECCEECC
Q psy5022 311 KEICSLLRGGIAERGGVRVGHRIIEINNQSVV 342 (359)
Q Consensus 311 ~~I~~v~~gs~A~~~gL~~GD~Il~INg~~v~ 342 (359)
.+|..+.... .++..||+|++|||.++.
T Consensus 98 i~V~dv~~~~----s~I~vGdEIlsING~pv~ 125 (583)
T 3dor_A 98 FYFVDIMTFS----SEIRVGDELLEVDGAPVQ 125 (583)
T ss_dssp EEEEEECSSC----CSSCTTCEEEEETTEEHH
T ss_pred EEEEeccccc----cCCCCCCEEEEECCccHH
Confidence 4565553222 279999999999999983
No 406
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=35.63 E-value=59 Score=28.76 Aligned_cols=40 Identities=10% Similarity=0.046 Sum_probs=31.0
Q ss_pred CcEEEEEEECCeeEEEeCCcc-ceeeccccceeeeEEecCC
Q psy5022 70 STEVDLFISTEKIMVLNTDLK-EIMMDHALRTISYIADIGD 109 (359)
Q Consensus 70 ~~~v~l~iS~~gi~~~~~~t~-~~~~~~~l~~IS~~~~~~~ 109 (359)
..++.|-|+.+||.+++.+++ ..+..++-..|.-++...+
T Consensus 210 g~~~~Lgv~~~Gi~v~~~~~k~~~~~~f~w~~I~~~~~~~~ 250 (294)
T 1ef1_A 210 GSELWLGVDALGLNIYEQNDRLTPKIGFPWSEIRNISFNDK 250 (294)
T ss_dssp CCEEEEEEETTEEEEEETTCSSSCSEEEEGGGEEEEEEETT
T ss_pred CCEEEEEEecCcEEEEeCCCccccceEEEcccceEeeecCC
Confidence 478999999999999999987 5566777666665554444
No 407
>1p5t_A DOK1, docking protein 1; signaling protein; 2.35A {Mus musculus} SCOP: b.55.1.2 PDB: 1uef_A*
Probab=33.54 E-value=1.7e+02 Score=22.73 Aligned_cols=72 Identities=15% Similarity=0.135 Sum_probs=49.2
Q ss_pred EEEEEEECCeeEEEeCC----ccceeeccccceeeeEEecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccchh
Q psy5022 72 EVDLFISTEKIMVLNTD----LKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDEAQ 147 (359)
Q Consensus 72 ~v~l~iS~~gi~~~~~~----t~~~~~~~~l~~IS~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~a~ 147 (359)
...|.|..+.|.+.+.. +.+.+..-|+..|==+..+.+ .|.|.+... + ...+ -=+.|.+.+++
T Consensus 26 ~y~L~vt~~~l~L~~~~~~~~~~~~l~~Wp~~~LRryG~d~~--------~FsFEaGRr-C--~tGe--G~f~F~t~~~~ 92 (127)
T 1p5t_A 26 SYILRVEAEKLTLLTLGAQSQILEPLLFWPYTLLRRYGRDKV--------MFSFEAGRR-C--PSGP--GTFTFQTSQGN 92 (127)
T ss_dssp EEEEEECSSEEEEEEECTTTCSEEEEEEEEGGGEEEEEECSS--------EEEEEECTT-S--TTCS--EEEEEECSCHH
T ss_pred cEEEEEcCCEEEEEecCcccCCCcceEEEehHHhhhcCccCC--------EEEEEecCC-C--CCCC--cEEEEEeCCHH
Confidence 68899999999999843 567888999888888887766 444443211 1 1112 24678888898
Q ss_pred hHHhhcchh
Q psy5022 148 FIAQSIGQA 156 (359)
Q Consensus 148 ~i~~~ig~a 156 (359)
+|..+|..+
T Consensus 93 ~If~~l~~~ 101 (127)
T 1p5t_A 93 DIFQAVEAA 101 (127)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 887655543
No 408
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=31.36 E-value=66 Score=31.85 Aligned_cols=40 Identities=18% Similarity=0.077 Sum_probs=31.2
Q ss_pred CcEEEEEEECCeeEEEeCCcc-ceeeccccceeeeEEecCC
Q psy5022 70 STEVDLFISTEKIMVLNTDLK-EIMMDHALRTISYIADIGD 109 (359)
Q Consensus 70 ~~~v~l~iS~~gi~~~~~~t~-~~~~~~~l~~IS~~~~~~~ 109 (359)
+..+.|-|+..||.+++..++ .++..++...|+-++...+
T Consensus 213 g~~l~LGV~~~GI~v~~~~~k~~~l~~f~w~~I~~isf~~k 253 (575)
T 2i1j_A 213 NTELWLGVDALGLNIYEKDDKLTPKIGFPWSEIRNISFNDR 253 (575)
T ss_dssp CCEEEEEECSSEEEEEETTCSSSCSEEEEGGGEEEEEEETT
T ss_pred CCEEEEEEcCCeeEEEeCCCCcccceEecHHHhhcccCCCC
Confidence 578999999999999999987 4566777777666554444
No 409
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=29.30 E-value=65 Score=31.89 Aligned_cols=30 Identities=13% Similarity=0.437 Sum_probs=22.2
Q ss_pred cEEEEEECCCChhhhcCCCCCCCEEEEECCccHHH
Q psy5022 232 TVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVA 266 (359)
Q Consensus 232 ~~~V~~v~~~s~A~~~G~L~~GD~Il~Vng~~v~~ 266 (359)
.++|..+.... ++ +..||+|++|||.++..
T Consensus 97 ~i~V~dv~~~~----s~-I~vGdEIlsING~pv~e 126 (583)
T 3dor_A 97 RFYFVDIMTFS----SE-IRVGDELLEVDGAPVQD 126 (583)
T ss_dssp CEEEEEECSSC----CS-SCTTCEEEEETTEEHHH
T ss_pred cEEEEeccccc----cC-CCCCCEEEEECCccHHH
Confidence 46666553222 25 99999999999999887
No 410
>2v76_A Docking protein 1; alternative splicing, protein-binding, PTB domain, phosphorylation, adaptor protein; HET: PGE; 1.60A {Homo sapiens}
Probab=28.25 E-value=1.9e+02 Score=21.66 Aligned_cols=72 Identities=14% Similarity=0.167 Sum_probs=49.1
Q ss_pred EEEEEEECCeeEEEeC----CccceeeccccceeeeEEecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccchh
Q psy5022 72 EVDLFISTEKIMVLNT----DLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDEAQ 147 (359)
Q Consensus 72 ~v~l~iS~~gi~~~~~----~t~~~~~~~~l~~IS~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~a~ 147 (359)
...|.+..+.|.+.+. ++...+..-|++.|==+..+.+ .|.|.+... + ...+ -=+.|.+.+++
T Consensus 24 ~y~L~v~~~~l~L~~~~~~~~~~~~~~~Wp~~~LRryG~d~~--------~FsFEaGRr-c--~tG~--G~f~F~~~~~~ 90 (107)
T 2v76_A 24 SYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKV--------MFSFEAGRR-C--PSGP--GTFTFQTAQGN 90 (107)
T ss_dssp EEEEEECSSEEEEEEEC----CEEEEEEEEGGGEEEEEECSS--------EEEEEECTT-S--TTCS--EEEEEECSCHH
T ss_pred cEEEEEcCCEEEEEecCccCCCCceeEEEEhHHhhhcCccCC--------EEEEEecCC-C--CCCC--cEEEEEeCCHH
Confidence 5889999999999974 4567888899888888887766 444443211 1 1112 24678888888
Q ss_pred hHHhhcchh
Q psy5022 148 FIAQSIGQA 156 (359)
Q Consensus 148 ~i~~~ig~a 156 (359)
+|..+|..+
T Consensus 91 ~If~~l~~~ 99 (107)
T 2v76_A 91 DIFQAVETA 99 (107)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 887766554
No 411
>2dlw_A Docking protein 2, isoform A; IRS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.76 E-value=1.2e+02 Score=23.05 Aligned_cols=72 Identities=11% Similarity=0.036 Sum_probs=50.2
Q ss_pred EEEEEEECCeeEE-EeCCccceeeccccceeeeEEecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccchhhHH
Q psy5022 72 EVDLFISTEKIMV-LNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDEAQFIA 150 (359)
Q Consensus 72 ~v~l~iS~~gi~~-~~~~t~~~~~~~~l~~IS~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~a~~i~ 150 (359)
...|.|....|.+ .+.+++..+..-|++.|==+..+.+ .|.|.+... +. ..+ -=+.|++.++++|.
T Consensus 29 ~y~L~l~~~~l~L~~~~~~~~~l~~Wpl~~LRryG~d~~--------~FsfEaGRr-C~--tGe--G~f~F~t~~~~~if 95 (113)
T 2dlw_A 29 SYTLRAGESALELWGGPEPGTQLYDWPYRFLRRFGRDKV--------TFSFEAGRR-CV--SGE--GNFEFETRQGNEIF 95 (113)
T ss_dssp EEEEEECSSBEECCCSSSSCCCSSCCBGGGCCCEEEETT--------EEEEEECSS-CS--SCS--EEEEECCSTHHHHH
T ss_pred cEEEEEcCCEEEEEecCCCCCceEEEEhHHhhhcCccCC--------EEEEEecCC-CC--CCC--CEEEEEcCCHHHHH
Confidence 6889999999999 7889999999989887777776666 444433111 11 111 13568888899887
Q ss_pred hhcchh
Q psy5022 151 QSIGQA 156 (359)
Q Consensus 151 ~~ig~a 156 (359)
.++..+
T Consensus 96 ~~l~~~ 101 (113)
T 2dlw_A 96 LALEEA 101 (113)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766553
No 412
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=24.46 E-value=1.1e+02 Score=27.25 Aligned_cols=38 Identities=11% Similarity=0.171 Sum_probs=30.9
Q ss_pred CcEEEEEEECCeeEEEeCCccceeeccccceeeeEEecCC
Q psy5022 70 STEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGD 109 (359)
Q Consensus 70 ~~~v~l~iS~~gi~~~~~~t~~~~~~~~l~~IS~~~~~~~ 109 (359)
..++.|-|+.+||.+++..++ +..++-.+|.-.+...+
T Consensus 216 ~~~~~LgV~~~Gi~v~~~~~k--l~~f~w~~I~~~s~~~k 253 (296)
T 3qij_A 216 GVDIILGVCSSGLLVYKDKLR--INRFPWPKVLKISYKRS 253 (296)
T ss_dssp SCEEEEEECSSEEEEEETTEE--EEEEEGGGEEEEEEETT
T ss_pred CCEEEEEECCCeEEEEeCCCe--EEEEEhhhcCEEEecCC
Confidence 468999999999999999875 67788777777765555
No 413
>1j0w_A Downstream of tyrosine kinase 5; beta strands, ALFA helix, transferase; 2.50A {Homo sapiens} SCOP: b.55.1.2
Probab=22.17 E-value=2.4e+02 Score=20.86 Aligned_cols=73 Identities=15% Similarity=0.149 Sum_probs=49.3
Q ss_pred cEEEEEEECCeeEEEeCCc-cceeeccccceeeeEEecCCceEEeeecccccccCCCCCCCCCCCcceeeEeeccchhhH
Q psy5022 71 TEVDLFISTEKIMVLNTDL-KEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDEAQFI 149 (359)
Q Consensus 71 ~~v~l~iS~~gi~~~~~~t-~~~~~~~~l~~IS~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~Chvf~s~~a~~i 149 (359)
-+..|.+....|.+.+..+ +..+..-+++.|==+..+.+ .|.|.+... +.. . --=+.|.+.++++|
T Consensus 21 G~~~L~l~~~~l~L~~~~~~~~~l~~Wp~~~LRRyG~~~~--------~FsFEaGRr-C~t--G--~G~f~F~~~~~~~I 87 (103)
T 1j0w_A 21 GECALQITYEYICLWDVQNPRVKLISWPLSALRRYGRDTT--------WFTFEAGRM-CET--G--EGLFIFQTRDGEAI 87 (103)
T ss_dssp EEEEEEECSSEEEEEESSSTTBEEEEEEGGGEEEEEECSS--------EEEEEECSS-SSS--C--SEEEEEECSCHHHH
T ss_pred ccEEEEECCCEEEEEecCCCCcceEEeeHHHHhhcCccCC--------EEEEEeCCC-CCC--C--CcEEEEEcCCHHHH
Confidence 3578999999999999876 46888889887777777766 444433110 111 1 12467888889888
Q ss_pred Hhhcchh
Q psy5022 150 AQSIGQA 156 (359)
Q Consensus 150 ~~~ig~a 156 (359)
..++..|
T Consensus 88 f~~v~~a 94 (103)
T 1j0w_A 88 YQKVHSA 94 (103)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766443
No 414
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=21.11 E-value=2.8e+02 Score=24.14 Aligned_cols=39 Identities=10% Similarity=0.172 Sum_probs=31.8
Q ss_pred EEEECCeeEEEeCCccceeeccccceeeeEEecCCceEE
Q psy5022 75 LFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVL 113 (359)
Q Consensus 75 l~iS~~gi~~~~~~t~~~~~~~~l~~IS~~~~~~~~~~~ 113 (359)
|.+..+.|.+.+..+++++..-++..|-.|+++..+|.|
T Consensus 182 l~l~~~~l~L~~~~~~~~~~~wpl~~lRr~G~~~~~F~f 220 (264)
T 1qqg_A 182 LCLTSKTISFVKLNSEAAAVVLQLMNIRRCGHSENFFFI 220 (264)
T ss_dssp EEECSSEEEEEETTCSSCSEEEEGGGEEEEEEETTEEEE
T ss_pred EEEeCcEEEEEecCCCcceEEeehhheecccccCcEEEE
Confidence 566777888888888889999999999999988774433
Done!