Query psy5025
Match_columns 533
No_of_seqs 194 out of 2040
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 23:55:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5025.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5025hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qcw_A Neurexin-1-alpha; synap 100.0 1.4E-55 4.7E-60 515.8 45.6 343 107-511 859-1216(1245)
2 3qcw_A Neurexin-1-alpha; synap 100.0 1.4E-54 4.8E-59 507.3 41.6 449 1-529 72-629 (1245)
3 3asi_A Neurexin-1-alpha; beta- 100.0 8.1E-52 2.8E-56 431.1 37.8 361 86-510 7-383 (410)
4 2wjs_A Laminin subunit alpha-2 100.0 2.4E-47 8.2E-52 416.9 44.4 413 5-513 86-550 (608)
5 2jd4_A Laminin subunit alpha-1 100.0 9.9E-47 3.4E-51 389.6 39.9 340 86-513 21-369 (383)
6 1dyk_A Laminin alpha 2 chain; 100.0 2E-46 6.8E-51 388.4 41.0 353 71-513 17-382 (394)
7 1h30_A GAS6, growth-arrest-spe 100.0 3.4E-45 1.2E-49 382.3 31.3 381 46-527 15-419 (422)
8 2wjs_A Laminin subunit alpha-2 100.0 2.4E-42 8.2E-47 377.4 39.4 342 86-512 12-373 (608)
9 3asi_A Neurexin-1-alpha; beta- 100.0 1.1E-32 3.7E-37 286.8 25.0 229 3-244 79-378 (410)
10 1pz7_A Agrin; structural prote 100.0 1.2E-26 4.2E-31 217.5 23.3 185 71-260 3-202 (204)
11 2jd4_A Laminin subunit alpha-1 99.9 4.2E-27 1.4E-31 242.6 20.9 243 2-250 94-367 (383)
12 3v64_A Low-density lipoprotein 99.9 1.1E-25 3.9E-30 208.5 22.5 174 86-260 4-189 (191)
13 3pve_A Agrin, AGRN protein; mR 99.9 1.5E-25 5.2E-30 207.4 20.8 170 86-255 11-183 (189)
14 1pz7_A Agrin; structural prote 99.9 2.8E-25 9.6E-30 208.3 22.3 186 287-513 4-193 (204)
15 3sh4_A LG3 peptide; actin disa 99.9 1.3E-25 4.5E-30 208.8 18.6 168 297-513 6-185 (195)
16 1dyk_A Laminin alpha 2 chain; 99.9 2.5E-25 8.5E-30 230.1 21.9 242 2-250 108-380 (394)
17 3v64_A Low-density lipoprotein 99.9 9.8E-25 3.4E-29 202.2 21.3 176 298-515 4-182 (191)
18 3sh4_A LG3 peptide; actin disa 99.9 4.3E-25 1.5E-29 205.4 17.4 174 86-260 7-194 (195)
19 3pve_A Agrin, AGRN protein; mR 99.9 3E-24 1E-28 198.7 22.3 167 297-513 10-179 (189)
20 2h0b_A Neurexin-1-alpha; B-san 99.9 8.3E-24 2.8E-28 195.0 20.4 159 297-508 6-166 (184)
21 2r16_A Neurexin-1-alpha; beta- 99.9 1.4E-23 4.8E-28 192.9 19.2 153 86-244 7-159 (182)
22 1d2s_A SHBG, sex hormone-bindi 99.9 1.7E-23 5.7E-28 190.1 18.2 137 338-512 27-163 (170)
23 2r16_A Neurexin-1-alpha; beta- 99.9 2.9E-23 9.9E-28 190.8 19.0 160 296-511 5-165 (182)
24 1h30_A GAS6, growth-arrest-spe 99.9 2.1E-23 7.1E-28 217.5 18.8 199 262-523 15-219 (422)
25 3bod_A Neurexin-1-alpha; neure 99.9 5E-23 1.7E-27 188.5 18.1 158 297-512 5-165 (178)
26 1f5f_A SHBG, sex hormone-bindi 99.9 5.6E-23 1.9E-27 192.7 18.6 151 338-523 39-193 (205)
27 1d2s_A SHBG, sex hormone-bindi 99.9 4.5E-23 1.5E-27 187.2 17.2 155 87-251 8-164 (170)
28 2h0b_A Neurexin-1-alpha; B-san 99.9 8E-23 2.7E-27 188.4 16.8 155 86-245 7-165 (184)
29 2r1b_A Neurexin-1-beta, neurex 99.9 2.5E-22 8.6E-27 189.9 16.3 157 298-511 12-200 (220)
30 3bod_A Neurexin-1-alpha; neure 99.9 8.6E-22 2.9E-26 180.3 18.6 149 86-245 6-160 (178)
31 1f5f_A SHBG, sex hormone-bindi 99.9 1.2E-21 4E-26 183.6 17.5 149 93-248 28-179 (205)
32 2r1b_A Neurexin-1-beta, neurex 99.9 1.3E-21 4.4E-26 185.0 17.6 148 86-244 12-194 (220)
33 2r1d_A Neurexin-1-beta, neurex 99.9 1.2E-21 4E-26 185.7 17.1 133 337-510 63-197 (226)
34 2r1d_A Neurexin-1-beta, neurex 99.9 1.5E-21 5E-26 185.0 17.7 159 74-244 30-192 (226)
35 3u7u_G Neuregulin 1; signaling 99.3 1.3E-12 4.5E-17 93.0 3.3 44 39-82 1-51 (55)
36 1edm_B Factor IX; epidermal gr 99.0 3E-10 1E-14 75.5 3.9 37 44-80 3-39 (39)
37 2gy5_A Angiopoietin-1 receptor 98.8 1.1E-09 3.6E-14 113.0 4.2 122 267-406 294-420 (423)
38 1hae_A Heregulin-alpha; growth 98.8 8.9E-10 3.1E-14 81.6 2.0 45 45-89 7-56 (63)
39 1a3p_A Epidermal growth factor 98.8 2.1E-09 7.1E-14 73.7 3.4 38 45-82 1-43 (45)
40 1egf_A Epidermal growth factor 98.8 3.5E-09 1.2E-13 75.3 4.0 39 44-82 3-46 (53)
41 2k2s_B Micronemal protein 6; m 98.8 9E-10 3.1E-14 80.1 0.9 43 39-81 5-51 (61)
42 3u7u_G Neuregulin 1; signaling 98.8 3.4E-09 1.2E-13 75.4 3.3 41 261-301 9-55 (55)
43 1k36_A Epiregulin; EGF-like fo 98.6 9.2E-09 3.2E-13 70.5 2.0 37 44-81 3-44 (46)
44 1tpg_A T-plasminogen activator 98.6 2.1E-08 7.2E-13 80.1 3.6 48 35-83 37-89 (91)
45 3flp_A SAP-like pentraxin; phy 98.6 1.4E-06 4.8E-11 81.4 16.0 144 336-512 31-179 (217)
46 1edm_B Factor IX; epidermal gr 98.5 8.2E-08 2.8E-12 63.5 4.4 34 261-294 4-38 (39)
47 1nql_B Epidermal growth factor 98.5 3.4E-08 1.2E-12 69.9 1.7 34 49-82 11-46 (53)
48 2erf_A Thrombospondin-1; TSP-1 98.5 4.3E-06 1.5E-10 77.6 16.3 123 337-500 62-193 (209)
49 3kqr_A Serum amyloid P-compone 98.5 7.3E-06 2.5E-10 75.7 17.7 140 336-513 30-171 (204)
50 1za4_A Thrombospondin 1; TSP-1 98.4 4.1E-06 1.4E-10 79.8 15.7 123 337-500 72-203 (251)
51 3pvn_A C-reactive protein; pen 98.4 9.9E-06 3.4E-10 75.0 17.8 140 336-513 30-173 (206)
52 2v73_A CBM40, putative EXO-alp 98.4 1.3E-05 4.3E-10 71.8 16.9 134 336-509 39-181 (191)
53 4fbr_A Lectin, myxobacterial h 98.3 1.8E-08 6.3E-13 95.6 -3.6 47 39-85 93-140 (267)
54 3ca7_A Protein spitz; argos, E 98.3 1.2E-07 4.1E-12 66.9 1.1 33 49-81 13-49 (52)
55 3flp_A SAP-like pentraxin; phy 98.3 1.9E-05 6.4E-10 73.8 16.2 151 91-245 16-174 (217)
56 2gy5_A Angiopoietin-1 receptor 98.3 1.6E-07 5.6E-12 96.6 1.2 121 35-162 268-407 (423)
57 2vj3_A Neurogenic locus notch 98.2 6.2E-07 2.1E-11 77.3 4.5 51 35-85 33-86 (135)
58 3pvn_A C-reactive protein; pen 98.2 5E-05 1.7E-09 70.2 17.5 151 86-245 8-167 (206)
59 1nfu_B Coagulation factor XA, 98.2 1.5E-07 5E-12 85.9 0.2 51 36-86 33-85 (195)
60 1a3p_A Epidermal growth factor 98.2 5.9E-07 2E-11 61.3 3.2 34 262-295 2-41 (45)
61 1egf_A Epidermal growth factor 98.2 1.2E-06 3.9E-11 62.1 4.2 36 261-296 4-45 (53)
62 3kqr_A Serum amyloid P-compone 98.2 7.9E-05 2.7E-09 68.7 17.4 151 86-245 8-165 (204)
63 1q4g_A Prostaglandin G/H synth 98.2 5E-07 1.7E-11 95.8 2.7 40 44-83 2-43 (553)
64 1x7a_L Coagulation factor IX, 98.2 8.5E-07 2.9E-11 77.4 3.5 48 38-86 41-89 (146)
65 3ltf_D Protein spitz; receptor 98.2 3.1E-07 1E-11 66.2 0.5 31 51-81 15-49 (58)
66 2vh0_B Activated factor XA lig 98.1 3.6E-07 1.2E-11 78.6 0.2 51 36-86 33-85 (134)
67 1g1s_A P-selectin; selectin, l 98.1 4.8E-07 1.6E-11 80.6 1.0 41 42-82 117-157 (162)
68 2vj3_A Neurogenic locus notch 98.1 1.9E-06 6.4E-11 74.3 4.5 43 44-86 5-49 (135)
69 2k2s_B Micronemal protein 6; m 98.1 4.7E-07 1.6E-11 65.7 0.4 36 260-295 11-50 (61)
70 2uur_A Collagen alpha-1(IX) ch 98.1 5.6E-05 1.9E-09 71.6 14.8 125 336-500 85-217 (245)
71 1yo8_A Thrombospondin-2; EGF, 98.1 5.4E-06 1.8E-10 88.6 8.2 42 44-86 3-48 (634)
72 2c4f_L Coagulation factor VII 98.1 1.3E-06 4.3E-11 76.0 2.7 45 40-84 42-87 (142)
73 1k36_A Epiregulin; EGF-like fo 98.1 2.3E-06 7.9E-11 58.4 3.4 34 261-295 4-43 (46)
74 1hae_A Heregulin-alpha; growth 98.1 8.6E-07 2.9E-11 65.3 1.1 36 261-296 7-48 (63)
75 4d90_A EGF-like repeat and dis 98.1 2.7E-06 9.1E-11 74.0 4.4 48 35-82 85-135 (143)
76 2v73_A CBM40, putative EXO-alp 98.0 0.00025 8.5E-09 63.4 16.3 133 106-245 40-179 (191)
77 4d90_A EGF-like repeat and dis 98.0 2.4E-06 8.3E-11 74.2 3.3 52 35-86 28-101 (143)
78 3nt1_A Prostaglandin-endoperox 98.0 2E-06 6.9E-11 91.2 3.1 39 44-82 1-41 (587)
79 3h5c_B Vitamin K-dependent pro 97.9 3.8E-06 1.3E-10 83.4 3.6 44 44-87 5-48 (317)
80 1nql_B Epidermal growth factor 97.9 4E-06 1.4E-10 59.1 2.3 32 265-296 11-45 (53)
81 1g1t_A E-selectin; EGF, adhesi 97.9 1.9E-06 6.4E-11 76.2 0.2 40 42-81 117-156 (157)
82 4dqa_A Uncharacterized protein 97.8 0.00039 1.3E-08 69.8 16.4 126 336-510 160-297 (355)
83 1za4_A Thrombospondin 1; TSP-1 97.8 0.00064 2.2E-08 64.6 16.8 124 106-240 72-204 (251)
84 2erf_A Thrombospondin-1; TSP-1 97.8 0.00052 1.8E-08 63.4 15.7 123 106-239 62-193 (209)
85 1aut_L Activated protein C; se 97.8 6.3E-06 2.1E-10 68.6 2.1 39 44-82 6-52 (114)
86 4dqa_A Uncharacterized protein 97.7 0.00032 1.1E-08 70.4 13.7 141 86-245 142-294 (355)
87 1emn_A Fibrillin; extracellula 97.7 2E-05 6.7E-10 61.3 3.2 43 42-86 2-48 (82)
88 1tpg_A T-plasminogen activator 97.6 2.9E-05 1E-09 61.6 3.7 35 261-295 49-86 (91)
89 3ca7_A Protein spitz; argos, E 97.6 1.4E-05 4.9E-10 56.1 1.4 31 265-295 13-48 (52)
90 3ltf_D Protein spitz; receptor 97.6 1.7E-05 5.7E-10 57.0 1.0 39 258-296 6-49 (58)
91 2vj2_A Jagged-1; signalling, p 97.6 2.7E-05 9.4E-10 69.6 2.7 46 35-80 119-169 (169)
92 2fd6_A Urokinase-type plasmino 97.5 3.8E-05 1.3E-09 64.5 3.0 33 51-83 2-37 (122)
93 1z6c_A Vitamin K-dependent pro 97.5 2.9E-05 1E-09 61.1 1.8 40 44-85 3-48 (87)
94 1xdt_R Hbegf, heparin-binding 97.5 2.8E-05 9.6E-10 58.8 1.3 37 44-81 37-78 (79)
95 1emn_A Fibrillin; extracellula 97.5 4.3E-05 1.5E-09 59.4 2.4 42 35-77 31-77 (82)
96 3e50_C Protransforming growth 97.5 7E-05 2.4E-09 51.6 3.1 39 40-81 6-46 (50)
97 1q4g_A Prostaglandin G/H synth 97.5 3.7E-05 1.3E-09 81.5 2.5 36 261-296 3-41 (553)
98 1lmj_A Fibrillin 1; EGF, calci 97.4 4.3E-05 1.5E-09 60.0 2.2 41 44-86 3-50 (86)
99 2uur_A Collagen alpha-1(IX) ch 97.4 0.0015 5E-08 61.9 13.0 126 106-242 86-220 (245)
100 3cfw_A L-selectin; EGF, cell a 97.4 4.4E-05 1.5E-09 67.8 2.1 41 42-82 117-157 (164)
101 3nt1_A Prostaglandin-endoperox 97.3 9.4E-05 3.2E-09 78.5 3.4 36 261-296 2-40 (587)
102 1x7a_L Coagulation factor IX, 97.3 0.00012 4.2E-09 63.6 3.6 37 260-296 48-85 (146)
103 2ygo_A WIF-1, WNT inhibitory f 97.3 0.00011 3.8E-09 65.2 3.3 39 39-81 143-181 (188)
104 2rnl_A Amphiregulin; AR, color 97.2 0.00018 6.3E-09 49.6 3.1 36 44-80 9-49 (50)
105 1g1s_A P-selectin; selectin, l 97.2 0.00011 3.7E-09 65.0 2.4 36 261-296 120-156 (162)
106 2i9a_A Urokinase-type plasmino 97.2 0.00019 6.6E-09 62.0 3.6 33 51-83 14-49 (145)
107 2c4f_L Coagulation factor VII 97.2 0.00014 4.9E-09 62.9 2.5 36 260-295 47-83 (142)
108 1iox_A Betacellulin; EGF-like 97.1 0.00018 6.1E-09 49.8 2.0 32 49-81 13-46 (50)
109 2wg3_C Hedgehog-interacting pr 97.1 7.8E-05 2.7E-09 77.7 -0.0 42 35-81 382-424 (463)
110 1z1y_A Ookinete surface protei 97.1 8.4E-05 2.9E-09 67.5 0.1 51 35-85 30-94 (186)
111 2bou_A EGF-like module contain 97.1 0.00017 5.7E-09 62.5 1.8 40 41-80 92-134 (143)
112 2bou_A EGF-like module contain 97.0 0.00019 6.5E-09 62.1 1.9 41 40-80 39-83 (143)
113 2w86_A Fibrillin-1, fibrillin1 97.0 0.00021 7.1E-09 62.2 1.9 35 44-79 4-38 (147)
114 1aut_L Activated protein C; se 97.0 0.00024 8.2E-09 58.9 2.1 36 261-296 7-51 (114)
115 1nfu_B Coagulation factor XA, 97.0 0.00012 4.1E-09 66.6 0.0 36 260-295 42-78 (195)
116 2jkb_A Sialidase B; intramolec 97.0 0.012 4.2E-07 64.0 15.7 136 336-510 56-208 (686)
117 1z6c_A Vitamin K-dependent pro 96.9 0.00018 6.2E-09 56.5 0.8 42 39-83 39-81 (87)
118 4fbr_A Lectin, myxobacterial h 96.9 4.1E-05 1.4E-09 72.7 -3.6 46 39-84 160-206 (267)
119 2w2n_E LDL receptor, low-densi 96.9 0.00029 1E-08 57.6 1.9 52 32-86 16-73 (107)
120 1yo8_A Thrombospondin-2; EGF, 96.9 0.00045 1.5E-08 73.9 3.8 45 35-79 31-85 (634)
121 1lmj_A Fibrillin 1; EGF, calci 96.8 0.00027 9.3E-09 55.3 1.2 37 39-76 40-79 (86)
122 2vh0_B Activated factor XA lig 96.8 0.00017 5.9E-09 61.7 0.0 36 260-295 42-78 (134)
123 2sli_A Intramolecular trans-si 96.8 0.015 5.3E-07 63.2 15.3 137 336-508 34-184 (679)
124 1g1t_A E-selectin; EGF, adhesi 96.8 0.00044 1.5E-08 60.7 2.3 36 261-296 120-156 (157)
125 1apq_A Complement protease C1R 96.8 0.00078 2.7E-08 47.2 3.0 30 44-75 4-43 (53)
126 2w86_A Fibrillin-1, fibrillin1 96.8 0.00024 8.2E-09 61.8 0.3 42 35-77 93-141 (147)
127 1xdt_R Hbegf, heparin-binding 96.6 0.0006 2E-08 51.5 1.5 34 261-295 38-77 (79)
128 3h5c_B Vitamin K-dependent pro 96.6 0.00068 2.3E-08 67.0 2.2 34 261-294 6-40 (317)
129 1z1y_A Ookinete surface protei 96.6 0.00048 1.7E-08 62.4 1.0 47 35-82 121-177 (186)
130 1a8d_A Tetanus neurotoxin; clo 96.6 0.069 2.4E-06 53.4 16.3 131 337-510 85-237 (452)
131 1uzk_A Fibrillin-1; glycoprote 96.4 0.0011 3.7E-08 58.6 2.3 35 44-79 3-42 (162)
132 3p5b_L Low density lipoprotein 96.4 0.0012 4.1E-08 67.5 3.0 41 45-86 1-44 (400)
133 2rnl_A Amphiregulin; AR, color 96.4 0.0023 8E-08 44.0 3.4 29 266-295 18-49 (50)
134 3e50_C Protransforming growth 96.4 0.0021 7E-08 44.2 3.0 31 265-296 13-46 (50)
135 1dx5_I Thrombomodulin; serine 96.4 0.0011 3.7E-08 55.2 1.8 33 44-78 4-37 (118)
136 3cfw_A L-selectin; EGF, cell a 96.3 0.0024 8.1E-08 56.4 3.9 36 261-296 120-156 (164)
137 1iox_A Betacellulin; EGF-like 96.2 0.0022 7.4E-08 44.3 2.2 31 265-296 13-46 (50)
138 2ygq_A WIF-1, WNT inhibitory f 96.1 0.0026 8.8E-08 62.9 3.2 39 39-81 143-181 (324)
139 2ygq_A WIF-1, WNT inhibitory f 96.1 0.0027 9.1E-08 62.8 3.1 43 35-81 170-213 (324)
140 2fd6_A Urokinase-type plasmino 96.0 0.0029 9.9E-08 52.9 2.7 30 267-296 2-35 (122)
141 1gl4_A Nidogen-1, entactin; im 96.0 0.0014 4.8E-08 62.5 0.6 37 44-80 5-45 (285)
142 2w2n_E LDL receptor, low-densi 95.9 0.00094 3.2E-08 54.6 -0.9 40 35-76 55-100 (107)
143 1dx5_I Thrombomodulin; serine 95.8 0.0015 5.2E-08 54.3 0.2 30 44-75 80-110 (118)
144 2kl7_A Fibulin-4; secreted, ca 95.7 0.004 1.4E-07 46.5 1.9 31 44-74 3-36 (71)
145 4b1m_A Levanase; hydrolase, CB 95.5 0.22 7.7E-06 44.5 13.4 87 338-457 65-158 (185)
146 2sli_A Intramolecular trans-si 95.5 0.18 6.1E-06 54.8 14.8 153 87-245 12-183 (679)
147 2i9a_A Urokinase-type plasmino 95.5 0.007 2.4E-07 52.1 3.0 30 267-296 14-47 (145)
148 1uzk_A Fibrillin-1; glycoprote 95.3 0.0048 1.6E-07 54.4 1.4 36 41-77 118-156 (162)
149 2jkb_A Sialidase B; intramolec 95.3 0.26 8.9E-06 53.6 15.3 134 106-245 57-205 (686)
150 2ygo_A WIF-1, WNT inhibitory f 95.3 0.0077 2.6E-07 53.4 2.6 35 258-296 145-181 (188)
151 3v65_B Low-density lipoprotein 95.0 0.004 1.4E-07 63.2 0.0 42 44-86 3-48 (386)
152 3fcs_B Integrin beta-3; beta p 94.8 0.0089 3E-07 64.8 2.1 40 36-79 514-559 (690)
153 3k6s_B Integrin beta-2; cell r 94.7 0.013 4.4E-07 63.4 3.0 43 35-81 543-593 (687)
154 2jkh_L Factor X light chain; p 94.7 0.012 4.1E-07 41.4 1.9 34 45-80 2-41 (55)
155 3v65_B Low-density lipoprotein 94.7 0.0085 2.9E-07 60.7 1.5 45 35-81 29-84 (386)
156 1szb_A Mannose binding lectin- 94.7 0.013 4.5E-07 51.9 2.5 43 36-80 113-167 (170)
157 3fcs_B Integrin beta-3; beta p 94.5 0.021 7.1E-07 61.9 4.0 42 35-80 550-600 (690)
158 1a8d_A Tetanus neurotoxin; clo 94.5 0.82 2.8E-05 45.7 14.8 128 106-245 85-234 (452)
159 2vj2_A Jagged-1; signalling, p 94.4 0.014 4.9E-07 51.7 2.0 43 35-81 22-66 (169)
160 2wg3_C Hedgehog-interacting pr 94.1 0.0071 2.4E-07 62.8 -0.6 43 35-81 413-456 (463)
161 4b1m_A Levanase; hydrolase, CB 94.0 0.53 1.8E-05 42.0 11.7 82 106-190 64-153 (185)
162 1klo_A Laminin; glycoprotein; 93.6 0.032 1.1E-06 49.0 2.7 30 51-80 2-34 (162)
163 2p28_B Integrin beta-2; hybrid 93.6 0.023 7.9E-07 52.4 1.7 40 38-81 168-215 (217)
164 1apq_A Complement protease C1R 93.4 0.055 1.9E-06 37.5 3.1 25 266-291 20-44 (53)
165 1nzi_A Complement C1S componen 93.2 0.078 2.7E-06 46.2 4.5 64 15-80 83-158 (159)
166 3zyj_B Netrin-G1; cell adhesio 93.2 0.016 5.6E-07 58.6 0.0 29 50-81 371-399 (426)
167 3p5b_L Low density lipoprotein 92.9 0.045 1.5E-06 55.7 2.9 34 261-294 1-38 (400)
168 3v0a_B NTNH; botulinum neuroto 92.5 5.9 0.0002 43.0 18.0 88 336-457 901-992 (1196)
169 3k6s_B Integrin beta-2; cell r 91.6 0.072 2.5E-06 57.6 2.6 47 35-85 451-519 (687)
170 1gl4_A Nidogen-1, entactin; im 91.5 0.047 1.6E-06 52.0 0.9 35 261-295 6-45 (285)
171 2p28_B Integrin beta-2; hybrid 91.4 0.042 1.4E-06 50.7 0.5 47 35-85 112-180 (217)
172 4aqs_A Laminin subunit beta-1; 91.4 0.036 1.2E-06 58.6 0.0 37 44-80 487-525 (525)
173 1epw_A Bontoxilysin B, botulin 90.6 3.7 0.00013 45.7 14.4 128 337-508 923-1067(1290)
174 2e26_A Reelin, reeler protein; 90.2 0.14 4.8E-06 54.9 3.1 67 11-82 492-567 (725)
175 2nyy_A Botulinum neurotoxin ty 90.0 3.1 0.00011 46.3 13.2 128 337-508 938-1080(1295)
176 2kl7_A Fibulin-4; secreted, ca 89.8 0.16 5.4E-06 37.7 2.3 30 261-290 4-37 (71)
177 4aqs_A Laminin subunit beta-1; 89.8 0.15 5.3E-06 53.7 3.1 46 35-80 424-475 (525)
178 3m0c_C LDL receptor, low-densi 88.3 0.24 8.3E-06 54.9 3.4 39 46-85 309-355 (791)
179 3t5o_A Complement component C6 87.8 0.26 8.9E-06 55.6 3.3 39 44-82 497-535 (913)
180 3m0c_C LDL receptor, low-densi 87.6 1.1 3.6E-05 49.7 8.0 45 35-80 338-391 (791)
181 1kig_L Factor XA; glycoprotein 87.6 0.19 6.7E-06 34.5 1.4 29 50-80 6-38 (51)
182 2jkh_L Factor X light chain; p 87.5 0.34 1.1E-05 33.8 2.6 28 261-289 2-31 (55)
183 1n7d_A LDL receptor, low-densi 87.2 0.38 1.3E-05 52.6 4.1 40 46-86 291-338 (699)
184 4azz_A Levanase; hydrolase; 1. 86.7 0.13 4.4E-06 45.4 0.0 74 350-456 61-136 (172)
185 1kli_L Factor VIIA; extrinsic 85.7 0.41 1.4E-05 35.2 2.3 35 44-80 5-46 (69)
186 3rsj_A BONT/F; clostridium bot 85.4 24 0.00083 34.6 15.1 130 336-510 66-211 (413)
187 1n7d_A LDL receptor, low-densi 84.3 0.7 2.4E-05 50.5 4.4 44 35-80 320-373 (699)
188 1klo_A Laminin; glycoprotein; 81.3 0.72 2.5E-05 40.2 2.5 29 267-295 2-34 (162)
189 2nyy_A Botulinum neurotoxin ty 80.8 19 0.00065 40.3 13.5 126 106-245 938-1079(1295)
190 3zyj_B Netrin-G1; cell adhesio 80.7 0.32 1.1E-05 49.1 0.0 34 262-298 365-401 (426)
191 2bz6_L Blood coagulation facto 80.2 0.71 2.4E-05 31.9 1.6 28 51-80 8-40 (53)
192 1szb_A Mannose binding lectin- 79.6 1 3.6E-05 39.3 3.0 21 267-289 136-157 (170)
193 3zr5_A Galactocerebrosidase; h 79.4 16 0.00055 39.2 12.6 59 365-456 565-624 (656)
194 1ijq_A LDL receptor, low-densi 79.2 2.6 8.8E-05 40.8 6.0 36 44-79 267-315 (316)
195 3rsj_A BONT/F; clostridium bot 77.1 59 0.002 32.0 14.9 126 106-245 67-208 (413)
196 2wph_E Coagulation factor IXA 75.7 1.6 5.6E-05 30.7 2.5 28 51-80 8-40 (59)
197 1epw_A Bontoxilysin B, botulin 75.4 40 0.0014 37.7 14.1 126 106-245 923-1066(1290)
198 3t5o_A Complement component C6 70.2 2.1 7.3E-05 48.1 3.0 36 261-296 498-534 (913)
199 3v64_C Agrin; beta propeller, 68.4 2 6.9E-05 42.3 2.1 35 45-81 2-41 (349)
200 4azz_A Levanase; hydrolase; 1. 70.3 1.2 4E-05 39.1 0.0 29 162-190 104-132 (172)
201 3v0a_B NTNH; botulinum neuroto 63.7 59 0.002 35.5 11.9 83 106-193 902-990 (1196)
202 3zr5_A Galactocerebrosidase; h 63.5 61 0.0021 34.6 12.6 55 136-191 565-621 (656)
203 1kig_L Factor XA; glycoprotein 63.4 2.7 9.1E-05 28.6 1.3 18 272-289 11-28 (51)
204 2bz6_L Blood coagulation facto 63.0 3.6 0.00012 28.2 1.9 18 272-289 12-30 (53)
205 3sov_A LRP-6, low-density lipo 61.5 4.3 0.00015 39.3 3.0 25 57-81 280-310 (318)
206 3fby_A COMP, cartilage oligome 61.0 4.8 0.00017 41.6 3.2 39 44-82 18-62 (551)
207 2zzj_A Glucuronan lyase A; bet 57.4 42 0.0014 30.7 8.5 66 365-457 109-181 (238)
208 2pe4_A Hyaluronidase-1; hyalur 57.3 1.2 4.2E-05 44.4 -1.8 19 64-82 396-414 (424)
209 1nzi_A Complement C1S componen 55.5 8.4 0.00029 32.8 3.5 23 267-290 127-149 (159)
210 3vuo_A NTNHA; protection of bo 55.4 93 0.0032 34.9 12.1 86 337-457 899-989 (1196)
211 3f1s_B Vitamin K-dependent pro 49.4 8.7 0.0003 36.4 2.8 35 44-80 2-43 (283)
212 1ijq_A LDL receptor, low-densi 47.7 11 0.00038 36.1 3.4 31 260-290 267-307 (316)
213 2ddu_A Reelin; beta-jelly-roll 47.1 7 0.00024 38.7 1.7 28 51-82 197-226 (387)
214 1kli_L Factor VIIA; extrinsic 46.5 12 0.00041 27.2 2.5 18 272-289 18-36 (69)
215 2pe4_A Hyaluronidase-1; hyalur 44.1 2.9 9.9E-05 41.7 -1.6 19 279-297 396-414 (424)
216 3zyp_A CIP1; metal binding pro 43.4 1.5E+02 0.0052 26.3 10.2 86 337-455 65-162 (218)
217 3v64_C Agrin; beta propeller, 43.0 32 0.0011 33.4 5.9 25 57-81 317-344 (349)
218 3ffz_A Botulinum neurotoxin ty 41.6 3.3E+02 0.011 30.6 13.5 89 336-457 912-1016(1252)
219 3u1x_A Putative glycosyl hydro 41.4 36 0.0012 31.3 5.6 89 338-458 80-188 (236)
220 3n7l_A Neurotoxin; HCR/D-SA, g 40.7 2.7E+02 0.0091 27.2 12.4 86 336-457 70-168 (424)
221 4a0p_A LRP6, LRP-6, low-densit 39.9 32 0.0011 36.7 5.7 35 44-80 265-306 (628)
222 3imm_A Putative secreted glyco 39.5 44 0.0015 29.8 5.7 87 106-192 47-144 (201)
223 3ojy_A Complement component C8 37.1 17 0.00059 38.1 2.9 37 45-81 465-501 (554)
224 2vxr_A Botulinum neurotoxin ty 35.2 3.5E+02 0.012 26.9 12.1 88 336-457 113-218 (482)
225 3u1x_A Putative glycosyl hydro 33.9 53 0.0018 30.1 5.4 32 164-195 156-187 (236)
226 2y38_A Laminin subunit alpha-5 31.7 28 0.00096 34.8 3.3 37 45-81 320-374 (403)
227 3fby_A COMP, cartilage oligome 31.0 25 0.00084 36.4 2.8 26 265-290 26-53 (551)
228 3ojy_B Complement component C8 30.9 20 0.00067 37.5 2.1 37 46-82 448-484 (537)
229 2p26_A Integrin beta-2; hybrid 30.7 21 0.00071 33.8 2.1 28 50-81 196-223 (280)
230 1ms9_A Trans-sialidase; trans- 30.6 48 0.0016 35.4 5.0 77 393-509 551-629 (648)
231 3sek_C Follistatin-related pro 30.6 31 0.0011 31.1 3.1 32 259-290 60-92 (209)
232 3s94_A LRP-6, low-density lipo 30.4 54 0.0018 34.8 5.5 24 56-79 590-617 (619)
233 3pme_A Type C neurotoxin; stru 29.9 4E+02 0.014 25.9 14.7 88 336-457 66-166 (420)
234 1lr7_A Follistatin, FS1; hepar 29.6 33 0.0011 25.0 2.6 27 45-71 2-29 (74)
235 1ob1_C Major merozoite surface 28.9 21 0.00072 27.9 1.4 37 45-81 5-44 (99)
236 2vu9_A Botulinum neurotoxin A 28.7 4.3E+02 0.015 26.0 13.3 88 336-457 85-187 (444)
237 3imm_A Putative secreted glyco 27.7 61 0.0021 28.8 4.6 86 338-456 48-146 (201)
238 3t3p_B Integrin beta-3; integr 27.6 21 0.00073 36.3 1.7 14 66-79 459-472 (472)
239 4aqt_A Laminin subunit gamma-1 25.8 37 0.0013 33.6 2.9 27 55-81 261-288 (375)
240 1n1i_A Merozoite surface prote 24.0 41 0.0014 26.5 2.3 38 44-81 10-50 (105)
241 3vuo_A NTNHA; protection of bo 24.0 8.2E+02 0.028 27.6 13.5 84 106-193 899-987 (1196)
242 1lr7_A Follistatin, FS1; hepar 23.5 59 0.002 23.6 3.1 29 261-289 2-32 (74)
243 2e26_A Reelin, reeler protein; 21.8 27 0.00092 37.5 1.1 27 266-296 539-566 (725)
244 1nl1_A Prothrombin; hydrolase; 21.7 21 0.00071 30.3 0.2 29 52-81 61-90 (147)
245 3v4v_B Integrin beta-7; cell a 21.6 57 0.002 33.4 3.4 28 54-81 465-495 (503)
246 4aqt_A Laminin subunit gamma-1 21.1 30 0.001 34.3 1.2 19 63-81 332-351 (375)
247 1nt0_A MAsp2, mannose-binding 20.8 3.1E+02 0.011 25.3 8.5 22 51-74 132-153 (286)
248 1oq1_A Protein YESU; structura 20.7 3.1E+02 0.011 24.6 7.6 66 162-239 152-217 (223)
249 3nsj_A Perforin-1; pore formin 20.3 43 0.0015 34.9 2.3 36 45-81 351-390 (540)
No 1
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=100.00 E-value=1.4e-55 Score=515.77 Aligned_cols=343 Identities=25% Similarity=0.487 Sum_probs=267.2
Q ss_pred eeEEEEEEEecCCCeeEEEccccCCCCCCeEEEEEECCEEEEEEEcCCCceEEE--eeccccCCCcEEEEEEEECC-EEE
Q psy5025 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR--SSNPISLGEWHKLRLTRTGR-HAY 183 (533)
Q Consensus 107 ~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~~~v~--s~~~lnDg~Wh~V~v~~~~~-~~~ 183 (533)
.++|+|+|||.+++|+|||.... ..||++|+|.+|+|++.++.|+++..++ +...++||+||+|.+.+..+ ...
T Consensus 859 ~~~is~~frT~~~~GlLly~~~~---~~dfi~l~L~~G~l~~~~~~G~g~~~~~~~s~~~vnDg~WH~V~~~~~~~~~~~ 935 (1245)
T 3qcw_A 859 SMHLFFQFKTTSLDGLILYNSGD---GNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHT 935 (1245)
T ss_dssp CEEEEEEEECSCSCEEEEEEEES---TTCEEEEEEETTEEEEEEESSSCCEEEECCCSSCSCSSSCEEEEEEECTTCEEE
T ss_pred eEEEEEEEEeCCCCEEEEEeCCC---CCCEEEEEEeCCEEEEEEECCCCcEEEEecCcccccCCCeEEEEEEEeCCeeEE
Confidence 57899999999999999998643 2799999999999999999998877665 67899999999999999886 467
Q ss_pred EEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCc--cCCCcccccCceeeeeeEEECcEEcccccccccC--CCccCC
Q psy5025 184 LQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNI--VSPKVKIKSSFIGCIQKVLINNHELNILGEAIQG--VNVVNC 259 (533)
Q Consensus 184 L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~--~~~~~~~~~~F~GCI~~l~in~~~l~~~~~~~~~--~~~~~C 259 (533)
|.||+....... .....++...++||||+|.... .+.......+|.|||++|+||++.+++...+... ....+|
T Consensus 936 L~VD~~~~~~~~--~~~~~l~~~~~lylGG~p~~~~~~~~~~~~~~~~F~GCi~~l~ing~~~~l~~~~~~~~~~v~~gC 1013 (1245)
T 3qcw_A 936 VKIDTKITTQIT--AGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGC 1013 (1245)
T ss_dssp EEETTEEEEEEC--CCCCCCCEEEEEEESCCCGGGGGGCCTTCCCSSBCCEEEEEEEETTBCCCTTTTCSEEESCEEESS
T ss_pred EEECCEeeeecc--CCcceeccCCCeEECcccccchhhhcccccccCCcEEEeeeEEECCEEcccccchhccccceeeee
Confidence 999996433222 2234566677899999986421 2222334578999999999999987754433222 223578
Q ss_pred C---CCCCCCCC-CCCeeeecCCceEEecC-CCCCcCcccceee-eeecCCCeeEEecCccccccccccceeeeeeeeee
Q psy5025 260 A---HPCITQPC-GSGSCVPLYDGYKCVCT-QSCKESHLTEVMC-ASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFR 333 (533)
Q Consensus 260 ~---~~C~~~pC-ngg~C~~~~~~~~C~C~-~g~~G~~c~~~~~-~~f~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (533)
+ +.|.++|| |+|+|++.|++|.|+|+ ++|.|..|+.... ..|..+.+++.|...... +
T Consensus 1014 ~~~~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~~~~~~f~~~~~~v~y~~~~~~----------------~ 1077 (1245)
T 3qcw_A 1014 EGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPPND----------------R 1077 (1245)
T ss_dssp SCCCCCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBCCCEEEEEEEEEEEEEECCTTC----------------C
T ss_pred ecccCceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCCCceEEEcCCCcEEEEecCCCC----------------c
Confidence 5 68999999 99999999999999999 5999999987543 345345678877644321 1
Q ss_pred ecceeeEEEEEEEeCCCCeEEEEeccCC-CCCeEEEEEECCEEEEEEEcCCceEEEeeCceeecCCCeEEEEEEEeeeee
Q psy5025 334 ITGYEFNIDMRIKTSSSSGLILWTGSSQ-SKDFLALGIHNGYAHVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVV 412 (533)
Q Consensus 334 ~~~~~~~i~~~~rt~~~~g~ll~~~~~~-~~~~l~l~l~~g~l~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~~~ 412 (533)
......+|+|.|||++++|+||++.+.. ..+||+|+|.+|+|.+.+++|.+...+..+...++||+||+|++.|
T Consensus 1078 ~~~~~~~i~l~FrT~~~~g~Ll~~~s~~~~~~~l~l~l~~G~l~~~~~~g~~~~~~~~~~~~v~DG~wH~V~i~r----- 1152 (1245)
T 3qcw_A 1078 PSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRFTR----- 1152 (1245)
T ss_dssp CCBSEEEEEEEEEBCCSSEEEEEEEECTTCCCEEEEEEETTEEEEEEESSSCCEEEECCSCCCBSSSCEEEEEEE-----
T ss_pred cccccceEEEEEEEcCCCeEEEEEeccCCCCceEEEEEECCEEEEEEECCCCceEEecCCcEecCCCeEEEEEEE-----
Confidence 1223468999999999999999986543 3699999999999999999998777666677889999999999999
Q ss_pred ecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEecCC-cceeeccCCceEEcCCCCcccccccccccCc
Q psy5025 413 MHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGG-KFEQLNTDSGLYVGGVEDIEELTRSKYHHSF 491 (533)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~~~-~~~~l~~~~~l~lGg~~~~~~~~~~~~~~~f 491 (533)
.++.+.|+||+.........+ ....++....|||||.+. ..+|
T Consensus 1153 ---------------------------~~~~~~l~VD~~~~~~~~~~g~~~~~~~~~~~l~lGg~~~---------~~~F 1196 (1245)
T 3qcw_A 1153 ---------------------------SGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQ---------GQPF 1196 (1245)
T ss_dssp ---------------------------ETTEEEEEETTSCCEEECCCSCCCCCBCSEEEEEESSTTT---------TCCC
T ss_pred ---------------------------CCCEEEEEECCeeeeeccCCcceeEEeccCceEEECCccC---------CCCC
Confidence 889999999998655433222 223455666799999764 2689
Q ss_pred eeeEEEEEEcCceEEeeccc
Q psy5025 492 KGWISNLILSNDYQVKLPLS 511 (533)
Q Consensus 492 ~GCi~~l~i~~~~~l~~~~~ 511 (533)
.|||++|++|+-.+|+++..
T Consensus 1197 ~Gcls~v~~n~~~pl~~a~~ 1216 (1245)
T 3qcw_A 1197 QGQLSGLYYNGLKVLNMAAE 1216 (1245)
T ss_dssp CEEEEEEEETTBCHHHHHHT
T ss_pred EEEEceEEECChHHHHHhhc
Confidence 99999999977777776554
No 2
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=100.00 E-value=1.4e-54 Score=507.26 Aligned_cols=449 Identities=22% Similarity=0.416 Sum_probs=273.2
Q ss_pred CccCCccccCCCceEEEEEEeCceeEEEEcCCCC-------------------c----------------------eee-
Q psy5025 1 MVKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNK-------------------I----------------------KGR- 38 (533)
Q Consensus 1 ~~~s~~~v~d~~WH~v~~~r~~~~~~l~vd~~~~-------------------~----------------------~G~- 38 (533)
++++..+|+||+||+|.|.|+++.++|+||+.+. + .+|
T Consensus 72 ~~~~~~~v~dg~Wh~v~v~r~~~~~~L~Vd~~~~~~~~~~~~~~~~~~~~~l~vGG~p~~~~~~~~~l~~~~v~~~~~F~ 151 (1245)
T 3qcw_A 72 TLLTDTPVNDGAWHNVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPFK 151 (1245)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEecCceeCCCCcEEEEEEEecCeEEEEECCccceeeeecCCcccccccCceeeeeCChHHhcccccccCccccccCCcc
Confidence 4678899999999999999999999999999431 0 122
Q ss_pred c--------------------------------CCCC-CCCCCCCCCCCCCeeeeCCCCceecCCC-CCCCCCccccccc
Q psy5025 39 S--------------------------------KECL-EDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDL 84 (533)
Q Consensus 39 ~--------------------------------~~C~-~d~C~~~pC~NggtC~~~~~~y~C~C~~-g~~G~~Ce~~~~~ 84 (533)
| ..|. .++|..+||+|||+|+..+++|.|+|+. +|.|++||.....
T Consensus 152 Gci~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~pC~~~~~~~~~~C~ngg~C~~~~~~~~C~C~~~g~~G~~Ce~~~~~ 231 (1245)
T 3qcw_A 152 GWIRDVRVQSSLALPVDSGEVKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQGKEE 231 (1245)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred eEEEEEEECCcccccccccCcccccccccccCCCCcCCcccCCCCCCCCCCCCccCCCCceeECCCCCccCCccccCccc
Confidence 0 0144 3457778999999999999999999996 9999999976554
Q ss_pred cccccCCceeEEEcCCccc-ccceeEEEEEEEecCCCeeEEEccccCCCCCCeEEEEEECCEEEEEEEcCCCceE-EE--
Q psy5025 85 QVPQFNGSSYLRYQGLGEQ-YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAAT-LR-- 160 (533)
Q Consensus 85 ~~~~F~g~syl~~~~~~~~-~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~~~-v~-- 160 (533)
..+.|+|.+|+.|+..... ......|+|+|||.+++|+|||.+. ..||++|+|++|+|.+.+++|++... +.
T Consensus 232 ~~~~F~G~~~~~y~~~~~~~~~~~~~i~l~FrT~~~~GlLl~~g~----~~d~l~L~L~~G~l~l~~~lG~g~~~~~~~~ 307 (1245)
T 3qcw_A 232 YIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGK----SADYVNLALKNGAVSLVINLGSGAFEALVEP 307 (1245)
T ss_dssp CEEEECSSCEEEEECTTSCEEESEEEEEEEEECSCSCEEEEEECS----SSEEEEEEEETTEEEEEEEESSCCEEEEECC
T ss_pred ceeeeCCcEEEEEccccCcccccccEEEEEEEeCCCCceEEEecC----CCCEEEEEEECCEEEEEEEcCCCeEEEEEcc
Confidence 5789999999999865433 2235789999999999999999864 28999999999999999999987754 22
Q ss_pred eeccccCCCcEEEEEEEECCEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEEC
Q psy5025 161 SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240 (533)
Q Consensus 161 s~~~lnDg~Wh~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in 240 (533)
....++||+||+|.+.|.++.+.|.||+........++....++....+||||+|....++. .....+|.|||+++.+|
T Consensus 308 ~~~~l~Dg~WH~V~v~r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~-~~~~~~F~GCi~~l~~n 386 (1245)
T 3qcw_A 308 VNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPG-SPVSNNFMGCLKEVVYK 386 (1245)
T ss_dssp CSSCSSSSSCEEEEEEEETTEEEEEESSSCCEEEECSSSCCCEEECSEEEESCCSSTTTSTT-CCCCCCCCEEEEEEEEE
T ss_pred CCcccCCCCEEEEEEEEeCCEEEEEECCcceeeeecCCCcccccCCCCEEECCcCChhhccC-CccCCCceeEeeeeEEC
Confidence 34689999999999999999999999997766666677777777778899999997654322 23457999999999999
Q ss_pred cEEcccccccccCCCccCCCCCCCCCCCCCCeeeecCCceEEecCCCCCcCcccceeeeeecCCCeeEEecCcccccccc
Q psy5025 241 NHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSG 320 (533)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~C~~~C~~~pCngg~C~~~~~~~~C~C~~g~~G~~c~~~~~~~f~~~~s~~~~~~~~~~~~~~ 320 (533)
++.+++........ .. | ..+......|.|.+. ....+++|..+.||+.++.+..
T Consensus 387 ~~~i~l~~~~~~~~---~~-------~---~~~~~g~~~~~C~~~--------~~~~~vsF~~~~syl~lp~~~~----- 440 (1245)
T 3qcw_A 387 NNDVRLELSRLAKQ---GD-------P---KMKIHGVVAFKCENV--------ATLDPITFETPESFISLPKWNA----- 440 (1245)
T ss_dssp ESSCEECHHHHHHS---CC-------T---TEEEESSCCCCCSCC--------CCCCCEEECSTTCCEEECCCCC-----
T ss_pred Cccccccchhhhhc---CC-------C---ccccCCceeecccCC--------CccccceeCCCCeEEEecCCCc-----
Confidence 98876321111100 00 0 001111112333221 1234678977889999987653
Q ss_pred ccceeeeeeeeeeecceeeEEEEEEEeCCCCeEEEEeccCC------------CCCeEEEEEECCEEEEEEEcCCceEEE
Q psy5025 321 LLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQ------------SKDFLALGIHNGYAHVMYNLGNGEVLL 388 (533)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~rt~~~~g~ll~~~~~~------------~~~~l~l~l~~g~l~~~~~~g~~~~~~ 388 (533)
....+|+|.|||.+++|+|||.+... ..+|++|+|.+|++++.++.|++...+
T Consensus 441 ---------------~~~~~is~~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~df~~LeL~~G~l~l~~~~G~g~~~l 505 (1245)
T 3qcw_A 441 ---------------KKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKI 505 (1245)
T ss_dssp ---------------SSEEEEEEEEECCCSCEEEEEEECCCCSSCCSSCTTSCCCCEEEEEEETTEEEEEEESSSCEEEE
T ss_pred ---------------cCceEEEEEEEeCCCCeEEEEecCccccccccccccccCCCEEEEEEeCCeEEEEEECCCCeEEE
Confidence 23578999999999999999985331 258999999999999999999888777
Q ss_pred eeCceeecCCCeEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEecCCcceeeccC
Q psy5025 389 ENNQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTD 468 (533)
Q Consensus 389 ~~~~~~~~dg~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~ 468 (533)
..+..+++||+||+|.+.| .++.++|.||+..... ..++....++..
T Consensus 506 ~~s~~~vnDG~WH~V~l~r--------------------------------~~~~~~L~VD~~~~~~-~~~~~~~~l~~~ 552 (1245)
T 3qcw_A 506 KALQKKVNDGEWYHVDFQR--------------------------------DGRSGTISVNTLRTPY-TAPGESEILDLD 552 (1245)
T ss_dssp ESCSSCCCSSCCEEEEEEE--------------------------------ETTEEEEEETTEEEEE-ECSSSCCCCCCC
T ss_pred eecccEecCCCEEEEEEEE--------------------------------ecCEEEEEEccccccc-ccCCCcceeccC
Confidence 7677899999999999999 8899999999976543 345555678888
Q ss_pred CceEEcCCCCcccccc-------cccccCceeeEEEEEEcCceEEeecccCc--C----CCCcc----cceeeecCCc
Q psy5025 469 SGLYVGGVEDIEELTR-------SKYHHSFKGWISNLILSNDYQVKLPLSRS--Q----GSSCQ----LTCETLNTGQ 529 (533)
Q Consensus 469 ~~l~lGg~~~~~~~~~-------~~~~~~f~GCi~~l~i~~~~~l~~~~~~~--~----~~~c~----~~~~~~~~~~ 529 (533)
..|||||+|....... .....+|+|||++|+| |++++|+...+. . ..+|. ..|.+-+|.+
T Consensus 553 ~~lylGG~p~~~~~~~~p~~~~~~~~~~gF~GCir~l~i-ng~~~dl~~~~~~~~~~gv~~gC~~~~~~~C~~~pC~n 629 (1245)
T 3qcw_A 553 DELYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFI-DGQSKDIRQMAEVQSTAGVKPSCSRETAKPCLSNPCKN 629 (1245)
T ss_dssp SCEEESSCCSSCTTCCCCTTCHHHHTTCBCCEEEEEEEE-TTEEECHHHHTTTTTCTTEESSCCCCSSCGGGSCCCCT
T ss_pred CceEEcccccccccccccccccccccccCceEEEEEEEE-CCEEcCchhhhhhhccccccccccccCCCCCCccCCCC
Confidence 8899999997643111 1235789999999999 889999864321 1 13564 4566666543
No 3
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=100.00 E-value=8.1e-52 Score=431.13 Aligned_cols=361 Identities=25% Similarity=0.488 Sum_probs=282.2
Q ss_pred ccccC-CceeEEEcCCcccccceeEEEEEEEecCCCeeEEEccccCCCCCCeEEEEEECCEEEEEEEcCCCceEEE--ee
Q psy5025 86 VPQFN-GSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR--SS 162 (533)
Q Consensus 86 ~~~F~-g~syl~~~~~~~~~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~~~v~--s~ 162 (533)
.++|. +.||++++.+... ..++|+|+|||.+++|+|||.+.. ..||++|+|.+|+|++.++.|+++..++ +.
T Consensus 7 ~v~F~~~~Syl~~p~~~~~--~~~~is~~frT~~~~GlLly~~~~---~~dfi~l~L~~G~l~~~~~~G~g~~~~~~~s~ 81 (410)
T 3asi_A 7 PVTFKTKSSYVALATLQAY--TSMHLFFQFKTTSLDGLILYNSGD---GNDFIVVELVKGYLHYVFDLGNGANLIKGSSN 81 (410)
T ss_dssp CEEECSTTCEEEESCCCCS--SCEEEEEEEECSCSCEEEEEEEBS---TTCEEEEEEETTEEEEEEESSSCEEEEECCCS
T ss_pred ccEeCCCCeeEEeCCCCCC--ceEEEEEEEEeCCCCeEEEEeCCC---CCCEEEEEEECCEEEEEEECCCCcEEEEeccC
Confidence 45785 6899999987643 368999999999999999998643 2799999999999999999998887776 66
Q ss_pred ccccCCCcEEEEEEEECCE-EEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCC--ccCCCcccccCceeeeeeEEE
Q psy5025 163 NPISLGEWHKLRLTRTGRH-AYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYN--IVSPKVKIKSSFIGCIQKVLI 239 (533)
Q Consensus 163 ~~lnDg~Wh~V~v~~~~~~-~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~--~~~~~~~~~~~F~GCI~~l~i 239 (533)
..++||+||+|.+.+..+. +.|.||+..... ..++ ...+++...+||||+|... .++.......+|.|||+++.+
T Consensus 82 ~~vnDg~WH~V~v~r~~~~~~~l~VD~~~~~~-~~~~-~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~~~F~GCi~~l~i 159 (410)
T 3asi_A 82 KPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ-ITAG-ARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDL 159 (410)
T ss_dssp SCSCSSSCEEEEEEECTTCEEEEEETTEEEEE-ECTT-CCCCCBCSCEEESCCCGGGGGGSCTTCCCSSBCCEEEEEEES
T ss_pred cEeCCCCeEEEEEEEcCCceEEEEECCEecee-ccCC-ccceecCCceEECccccchhhhhhhhcccccCchhheeheee
Confidence 8999999999999999864 789999965332 2232 3456777899999999753 223333345789999999999
Q ss_pred CcEEccccccccc-C-CCccCCC---CCCCCCCC-CCCeeeecCCceEEecCC-CCCcCccccee-eeeecCCCeeEEec
Q psy5025 240 NNHELNILGEAIQ-G-VNVVNCA---HPCITQPC-GSGSCVPLYDGYKCVCTQ-SCKESHLTEVM-CASFDHGASFLHYL 311 (533)
Q Consensus 240 n~~~l~~~~~~~~-~-~~~~~C~---~~C~~~pC-ngg~C~~~~~~~~C~C~~-g~~G~~c~~~~-~~~f~~~~s~~~~~ 311 (533)
|++.+++...+.. . ....+|+ +.|.++|| |+|+|++.|++|.|+|+. +|.|..|+... ...|..+.+|+.|.
T Consensus 160 ng~~~dl~~~~~~~~~~v~~gC~~~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~~~~~~f~~~~~~~~~~ 239 (410)
T 3asi_A 160 NGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYK 239 (410)
T ss_dssp SSCCCCTTTTCSEEESSEEESCCCCSSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEECCEEEEEEEEEEEEEE
T ss_pred CCcccCchhhhhccCCccCCCCCCCCCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCCCcccccccCCCceEEEe
Confidence 9998885443322 1 1235784 68999999 999999999999999996 99999998643 45675567898886
Q ss_pred CccccccccccceeeeeeeeeeecceeeEEEEEEEeCCCCeEEEEeccCC-CCCeEEEEEECCEEEEEEEcCCceEEEee
Q psy5025 312 DPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQ-SKDFLALGIHNGYAHVMYNLGNGEVLLEN 390 (533)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~rt~~~~g~ll~~~~~~-~~~~l~l~l~~g~l~~~~~~g~~~~~~~~ 390 (533)
.+... +......+|+|.|||.+++|+|||..+.. ..+|++|+|.+|+|++.++.|.+...+..
T Consensus 240 ~~~~~----------------~~~~~~~~i~l~frT~~~~GlLl~~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~ 303 (410)
T 3asi_A 240 WPPND----------------RPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDIAIEE 303 (410)
T ss_dssp CCTTC----------------CCCBSEEEEEEEEECCCSEEEEEEEEECTTCCCEEEEEEETTEEEEEEESSSSCEEEEC
T ss_pred cCCCC----------------CccceeeEEEEEEEeCCCCEEEEEEecCCCCCceEEEEEeCCEEEEEEECCCCceEEec
Confidence 54321 11123458999999999999999986543 36999999999999999999887666664
Q ss_pred CceeecCCCeEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEecCC-cceeeccCC
Q psy5025 391 NQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGG-KFEQLNTDS 469 (533)
Q Consensus 391 ~~~~~~dg~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~~~-~~~~l~~~~ 469 (533)
....++||+||+|.+.| .++.+.|+||+........++ ....++...
T Consensus 304 ~~~~l~DG~wH~V~v~r--------------------------------~~~~~~L~VD~~~~~~~~~~g~~~~~~~~~~ 351 (410)
T 3asi_A 304 SNAIINDGKYHVVRFTR--------------------------------SGGNATLQVDSWPVIERYPAGRQLTIFNSQA 351 (410)
T ss_dssp CSCCCCSSSCEEEEEEE--------------------------------ETTEEEEEETTSCCEEECCSSCCCCCBCCEE
T ss_pred CccCcCCCCeEEEEEEE--------------------------------ECCEEEEEECCcceecccCCCccceeeeccc
Confidence 55889999999999999 889999999998766543333 223455667
Q ss_pred ceEEcCCCCcccccccccccCceeeEEEEEEcCceEEeecc
Q psy5025 470 GLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLPL 510 (533)
Q Consensus 470 ~l~lGg~~~~~~~~~~~~~~~f~GCi~~l~i~~~~~l~~~~ 510 (533)
.|||||+|.. .+|+|||++|+||+...+++..
T Consensus 352 ~lylGG~p~~---------~~F~GCi~~v~ing~~~l~~a~ 383 (410)
T 3asi_A 352 TIIIGGKEQG---------QPFQGQLSGLYYNGLKVLNMAA 383 (410)
T ss_dssp EEEESSTTTT---------CCCCEEEEEEEETTBCHHHHHH
T ss_pred eEEECCcccC---------CCCEEEEEEEEECCHHHHHHHh
Confidence 8999999863 5899999999995544567653
No 4
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=100.00 E-value=2.4e-47 Score=416.94 Aligned_cols=413 Identities=20% Similarity=0.308 Sum_probs=281.9
Q ss_pred CccccCCCceEEEEEEeCceeEEEEcCCCCc-------------ee------------e-cCCCC-------------CC
Q psy5025 5 DNQVILDDWNTVRVFRHRWDAWIQLNDGNKI-------------KG------------R-SKECL-------------ED 45 (533)
Q Consensus 5 ~~~v~d~~WH~v~~~r~~~~~~l~vd~~~~~-------------~G------------~-~~~C~-------------~d 45 (533)
..++|||+||+|.++|+++.++|+||+.... .| . ..+-+ ..
T Consensus 86 ~~~~~dg~WH~V~v~r~~~~~~l~Vd~~~~~~~~~~~~~~~~~~~g~~~~L~l~~~~~l~vGG~p~~~~~~~~~~~~~F~ 165 (608)
T 2wjs_A 86 DLTIDDSYWYRIEASRTGRNGSISVRALDGPKASMVPSTYHSVSPPGYTILDVDANAMLFVGGLTGKIKKADAVRVITFT 165 (608)
T ss_dssp SCCCTTSCCEEEEEEEETTEEEEEEEESSSTTTTSCCCCEEEECCSSCCSCCCCSSCEEEESSCCTTSCCCTTCCCCCCC
T ss_pred CccccCCceEEEEEEEeCCEEEEEEecccCccccccccccccccCCcceeeccCCCCcEEeCCcCccccCCcccccCCcc
Confidence 5689999999999999999999999987520 00 1 11111 11
Q ss_pred CCCCCCCCCCCeeeeCCC--CceecCCCCCCCCCccccccccccccCCceeEEEcCCcccccceeEEEEEEEecCCCeeE
Q psy5025 46 KCNKTPCEHGGKCITTPG--SSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGIL 123 (533)
Q Consensus 46 ~C~~~pC~NggtC~~~~~--~y~C~C~~g~~G~~Ce~~~~~~~~~F~g~syl~~~~~~~~~~~~~~ls~~FrT~~~dGlL 123 (533)
.|..+-..|+.. ++.++ .....|..-..++.|+.... ..+|.|.+|+.++...........|+|+|||.+++|+|
T Consensus 166 GCi~~l~in~~~-i~l~~~~~~~g~~~gC~~~p~~~~~~~--~~~F~g~sy~~~~~~~~~~~~~~~isl~FrT~~~~GlL 242 (608)
T 2wjs_A 166 GCMGETYFDNKP-IGLWNFREKEGDCKGCTVSPQVEDSEG--TIQFDGEGYALVSRPIRWYPNISTVMFKFRTFSSSALL 242 (608)
T ss_dssp EEECCCEESSSB-C----CCEEESCCCCC--------CCC--CEEEEEEEEEEEECCTTCBTTEEEEEEEEEESCSEEEE
T ss_pred EEEEEEEECCEE-ccccccccccCCCCCCCCCcccccCCc--ceEECCCcceEEeccccCCCcceEEEEEEEeCCCCeEE
Confidence 233333333322 12221 11223332223455664321 47899999999975332223468999999999999999
Q ss_pred EEccccCCCCCCeEEEEEECCEEEEEEEcCCCceEEEeeccccCCCcEEEEEEEECCEEEEEEcCccCc-----eeeCCC
Q psy5025 124 LYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSS-----QILSPG 198 (533)
Q Consensus 124 l~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~~~v~s~~~lnDg~Wh~V~v~~~~~~~~L~VD~~~~~-----~~~~~~ 198 (533)
||.+... ..||++|+|.+|+|++.++.|++...+.+...++||+||+|.+.+.++.+.|.||+.... ....++
T Consensus 243 l~~~~~~--~~d~l~L~L~~G~l~~~~~~g~~~~~l~s~~~~nDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~g 320 (608)
T 2wjs_A 243 MYLATRD--LKDFMSVELSDGHVKVSYDLGSGMTSVVSNQNHNDGKWKAFTLSRIQKQANISIVDIDSNQEENVATSSSG 320 (608)
T ss_dssp EEEECTT--SSSEEEEEEETTEEEEEEECSSCEEEEEEEEECCSSSCEEEEEEEETTEEEEEEEETTTCCEEEEEEECCS
T ss_pred EEecCCC--CCceEEEEEECCEEEEEEECCCCcEEEEcCccccCCceEEEEEEEecceEEEEEeccccccccccccccCC
Confidence 9987542 389999999999999999999888788888899999999999999999999999985421 123344
Q ss_pred Cceeee--cCCCEEEcCcCCCCccCCCcccccCceeeeeeEEECcEEcccccccccCCCc-cCCCCCCCCCCCCCCeeee
Q psy5025 199 PFTQLS--LSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNV-VNCAHPCITQPCGSGSCVP 275 (533)
Q Consensus 199 ~~~~l~--~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in~~~l~~~~~~~~~~~~-~~C~~~C~~~pCngg~C~~ 275 (533)
....++ ....+||||+|....++. .....+|.|||+++.+|++.+++. ......++ .+|+.
T Consensus 321 ~~~~l~~~~~~~lylGG~p~~~~~~~-~~~~~~F~GCi~~v~in~~~~~l~-~~~~~~~v~~gC~~-------------- 384 (608)
T 2wjs_A 321 NNFGLDLKADDKIYFGGLPTLRNLRP-EVNVKKYSGCLKDIEISRTPYNIL-SSPDYVGVTKGCSL-------------- 384 (608)
T ss_dssp SCCCCCCCTTCEEEESCCCCCSCCCT-TCCCCCCEEEEEEEEETTEEECGG-GCSSCEEEEESCCC--------------
T ss_pred ccccccccCCCceEEeccCcccccCc-ccccCCceEEeeeEEECCEecCcc-ccccccccccCCCc--------------
Confidence 444454 357899999998654321 234578999999999999999843 32222222 23321
Q ss_pred cCCceEEecCCCCCcCcccceeeeeecCCCeeEEecCccccccccccceeeeeeeeeeecceeeEEEEEEEeCCCCeEEE
Q psy5025 276 LYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLIL 355 (533)
Q Consensus 276 ~~~~~~C~C~~g~~G~~c~~~~~~~f~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~rt~~~~g~ll 355 (533)
+....+.| .+.+|+.++.... ...++|+|.|||++++|+||
T Consensus 385 ------------------~~~~~~~F-~~~g~~~~~~~~~--------------------~~~~~i~~~FRT~~~~GlLl 425 (608)
T 2wjs_A 385 ------------------ENVYTVSF-PKPGFVELAAVSI--------------------DVGTEINLSFSTRNESGIIL 425 (608)
T ss_dssp ------------------CCTTEEEC-SSSCEEEECCCCB--------------------CTTEEEEEEEEESCSSEEEE
T ss_pred ------------------cccccccc-CCCCeEEecCccC--------------------CCCcEEEEEEEeCCCCeEEE
Confidence 01134677 6789999875432 23478999999999999999
Q ss_pred EeccCCCCCeEEEEEECCEEEEEEEcCCce---EEEeeCceeecCCCeEEEEEEEeeeeeecCCcccccCCcchhhhhhh
Q psy5025 356 WTGSSQSKDFLALGIHNGYAHVMYNLGNGE---VLLENNQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCL 432 (533)
Q Consensus 356 ~~~~~~~~~~l~l~l~~g~l~~~~~~g~~~---~~~~~~~~~~~dg~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (533)
|.+.. ..+|++|+|.+|+|++.++.|++. ..+......++||+||+|.+.+
T Consensus 426 ~~~~~-~~~~l~l~L~~G~l~~~~~~g~~~~~~~~l~~~~~~l~DG~WH~V~v~~------------------------- 479 (608)
T 2wjs_A 426 LGSGG-GQAYYAIFLNKGRLEVHLSSGTRTMRKIVIKPEPNRFHDGREHSVHVER------------------------- 479 (608)
T ss_dssp EEC----CCEEEEEEETTEEEEEEEC----CEEEEECCCSSCSSSSSCEEEEEEE-------------------------
T ss_pred EEcCC-CCceEEEEEECCEEEEEEECCCCceeEEEEeCCCcccCCCCeEEEEEEE-------------------------
Confidence 98643 479999999999999999988653 2233246789999999999999
Q ss_pred hhccccccCcEEEEEECCceeeeEecCCcceeeccCCceEEcCCCCcccccccccccCceeeEEEEEEcCceEEeecccC
Q psy5025 433 SIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLPLSR 512 (533)
Q Consensus 433 ~~~~~~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~lGg~~~~~~~~~~~~~~~f~GCi~~l~i~~~~~l~~~~~~ 512 (533)
.++.+.|+||+........ .....++. ..|||||+|............+|+|||++|+| |++++++...+
T Consensus 480 -------~~~~~~L~VD~~~~~~~~~-~~~~~l~~-~~lylGG~p~~~~~~~~~~~~~F~GCi~~v~i-n~~~ldl~~~~ 549 (608)
T 2wjs_A 480 -------TRGIFTVQIDEDRRHMQNL-TEEQPIEV-KKLFVGGAPPEFQPSPLRNIPAFQGCVWNLVI-NSIPMDFAQPI 549 (608)
T ss_dssp -------CSSEEEEEESSSCCEEEEC-CCCSCBCC-SCEEESCCCC--------CCCCCCEEEEEEEE-TTEECCCSSCS
T ss_pred -------eCCEEEEEECCcccccccC-Cccccccc-CceEEeCCCccccccccccCCCCcEEEEEEEE-CCEEccchhhh
Confidence 8899999999987644322 22233443 46999999987543333466789999999999 88999998776
Q ss_pred c
Q psy5025 513 S 513 (533)
Q Consensus 513 ~ 513 (533)
.
T Consensus 550 ~ 550 (608)
T 2wjs_A 550 A 550 (608)
T ss_dssp E
T ss_pred h
Confidence 3
No 5
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=100.00 E-value=9.9e-47 Score=389.55 Aligned_cols=340 Identities=22% Similarity=0.393 Sum_probs=260.1
Q ss_pred ccccC--CceeEEEcCCcccccceeEEEEEEEecCCCeeEEEccccCCCCCCeEEEEEECCEEEEEEEcCCCceEEEeec
Q psy5025 86 VPQFN--GSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163 (533)
Q Consensus 86 ~~~F~--g~syl~~~~~~~~~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~~~v~s~~ 163 (533)
..+|. +.||+.|+.........+.|+|+|||.+++|+|||.+... ..||++|+|.+|+|++.+++|++...+.++.
T Consensus 21 a~~Fg~~~~S~~~~~~~~~~~~~~~~is~~frT~~~~GlLly~~~~~--~~d~~~l~L~~G~l~~~~~~g~~~~~~~~~~ 98 (383)
T 2jd4_A 21 AHQFGLSQNSHLVLPLQQSDVRKRLQVQLSIRTFASSGLIYYVAHQN--QMDYATLQLQEGRLHFMFDLGKGRTKVSHPA 98 (383)
T ss_dssp CEECCSSTTCEEEEECCSCCCSSEEEEEEEEEECCSCEEEEEEECTT--SSSEEEEEEETTEEEEEEECSSCEEEEECCC
T ss_pred ccccCCCCCeeEEEeCCchhcccceEEEEEEEcCCCCeEEEEeCCCC--CCcEEEEEEECCEEEEEEECCCCeEEEeCcc
Confidence 45565 4899999865443345789999999999999999987542 3799999999999999999998888888889
Q ss_pred cccCCCcEEEEEEEECCEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEECcEE
Q psy5025 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHE 243 (533)
Q Consensus 164 ~lnDg~Wh~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in~~~ 243 (533)
.++||+||+|.+.|.++.+.|.||+........++....++....+||||+|.............+|.|||+++.+|++.
T Consensus 99 ~~~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCi~~l~in~~~ 178 (383)
T 2jd4_A 99 LLSDGKWHTVKTEYIKRKAFMTVDGQESPSVTVVGKATTLDVERKLYLGGLPSHYRARNIGTITHSIPACIGEIMVNGQQ 178 (383)
T ss_dssp CCTTSSCEEEEEEEETTEEEEEETTEECCCEECCSSCCCCCCCSEEEESSCCTTCCCCSSCSCCSBCCEEEEEEEETTEE
T ss_pred eecCCCcEEEEEEEeCCEEEEEEcCccccceecCCCcceecCCCCeEEeccCcccccccccccCCCceEEeEEEEECCEE
Confidence 99999999999999999999999997766555556666677778999999997543222223457899999999999999
Q ss_pred cccccccccCCCccCCCCCCCCCCC-CCCeeeecCCceEEecCCCCCcCcccceeeeeecCCCeeEEecCcccccccccc
Q psy5025 244 LNILGEAIQGVNVVNCAHPCITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLL 322 (533)
Q Consensus 244 l~~~~~~~~~~~~~~C~~~C~~~pC-ngg~C~~~~~~~~C~C~~g~~G~~c~~~~~~~f~~~~s~~~~~~~~~~~~~~~~ 322 (533)
++ +.+.. .| |.+.|.+.+ .....| .+.+|+.|......
T Consensus 179 l~-l~~~~---------------~~~~~~~C~~~~------------------~~g~~F-~g~sy~~~~~~~~~------ 217 (383)
T 2jd4_A 179 LD-KDRPL---------------SASAVDRCYVVA------------------QEGTFF-EGSGYAALVKEGYK------ 217 (383)
T ss_dssp CC-TTSCS---------------EEESCBCCBSSE------------------ESSEEE-EEEEEEEEEEEEEC------
T ss_pred ec-cCCcc---------------ccCccccccCcC------------------ccCceE-CCCeEEEEecCccc------
Confidence 88 33221 23 445554321 123456 78899988422211
Q ss_pred ceeeeeeeeeeecceeeEEEEEEEeCCCCeEEEEeccCCCCCeEEEEEECCEEEEEEEcCCceEEEeeC---ceeecCCC
Q psy5025 323 HYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYNLGNGEVLLENN---QTKINNGV 399 (533)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~i~~~~rt~~~~g~ll~~~~~~~~~~l~l~l~~g~l~~~~~~g~~~~~~~~~---~~~~~dg~ 399 (533)
....++|+|+|||.+++|+|||.+.. ..+|++|+|.+|+|++.++.|.+...+... ...++||+
T Consensus 218 ------------~~~~~~isl~frT~~~~GlLl~~~~~-~~d~l~l~L~~G~l~~~~~~g~g~~~~~~~~~~~~~l~DG~ 284 (383)
T 2jd4_A 218 ------------VRLDLQITLEFRTTSKNGVLLGISSA-KVDAIGLEIVDGKVLFHVNNGAGRITATYQPRAARALCDGK 284 (383)
T ss_dssp ------------CBSCEEEEEEEEESCSCEEEEEEECS-SSCEEEEEEETTEEEEEEESSSCEEEEEECCSSTTGGGSSS
T ss_pred ------------cCCceEEEEEEEeCCCCEEEEEecCC-CCcEEEEEEECCEEEEEEECCCCcEEEEEecCCCccccCCC
Confidence 13457999999999999999998643 479999999999999999998876655432 46799999
Q ss_pred eEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEecCCcceeeccCCceEEcCCCCc
Q psy5025 400 WHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDI 479 (533)
Q Consensus 400 wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~lGg~~~~ 479 (533)
||+|.+.| .++.+.|+||+........+.....++....|||||+|..
T Consensus 285 WH~V~l~~--------------------------------~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~ 332 (383)
T 2jd4_A 285 WHTLQAHK--------------------------------SKHRIVLTVDGNSVRAESPHTHSTSADTNDPIYVGGYPAH 332 (383)
T ss_dssp CEEEEEEE--------------------------------ETTEEEEEETTEEEEEC----CCCCBCCCEEEEESCCCTT
T ss_pred cEEEEEEE--------------------------------cCCEEEEEECCeecccccCCCCcccccCCCCEEEeccccc
Confidence 99999999 8899999999987655333333346777778999999987
Q ss_pred ccccccccccCceeeEEEEEEcCc---eEEeecccCc
Q psy5025 480 EELTRSKYHHSFKGWISNLILSND---YQVKLPLSRS 513 (533)
Q Consensus 480 ~~~~~~~~~~~f~GCi~~l~i~~~---~~l~~~~~~~ 513 (533)
..........+|+|||++|+||+. ..+|+...+.
T Consensus 333 ~~~~~~~~~~~F~GCi~~v~in~~~~~~~~dl~~~~~ 369 (383)
T 2jd4_A 333 IKQNSLSSRASFRGCVRNLRLSRGSQVQSLDLSRAFD 369 (383)
T ss_dssp SCCTTCSCCCBCEEEEEEEEEC---CCEECCGGGCSE
T ss_pred cccCCccccCCCceEccEEEECCCCcccccChhhHHh
Confidence 544444567899999999999433 2588876654
No 6
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=100.00 E-value=2e-46 Score=388.44 Aligned_cols=353 Identities=20% Similarity=0.338 Sum_probs=262.6
Q ss_pred CCCCCCCccccccc----ccccc--CCceeEEEcCCcccccceeEEEEEEEecCCCeeEEEccccCCCCCCeEEEEEECC
Q psy5025 71 LGFTGDLCQTRLDL----QVPQF--NGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDR 144 (533)
Q Consensus 71 ~g~~G~~Ce~~~~~----~~~~F--~g~syl~~~~~~~~~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~l~L~~G 144 (533)
..|.|+ |...... ....| ...||+.++.........+.|+|+|||.+++|+|||.+... ..||++|+|.+|
T Consensus 17 ~~~~~~-C~~~~~~~~~~~a~~Fg~~~~s~~~~~~~~~~~~~~~~is~~frT~~~~GlLly~~~~~--~~dfi~l~L~~G 93 (394)
T 1dyk_A 17 TMVHGP-CVAESEPALLTGSKQFGLSRNSHIAIAFDDTKVKNRLTIELEVRTEAESGLLFYMARIN--HADFATVQLRNG 93 (394)
T ss_dssp ---CCS-SCCCCCCCBCTTCEECCSSTTCEEEEECCGGGGSSEEEEEEEEEECCSCEEEEEEECTT--SSSEEEEEEETT
T ss_pred CCCCCc-cCCCccccccccceecCCCCCcEEEEEcCccccccceEEEEEEEeCCCCeEEEEcCCCC--CCceEEEEEECC
Confidence 356666 8765421 12334 34799888754444445789999999999999999987632 389999999999
Q ss_pred EEEEEEEcCCCceEEEeeccccCCCcEEEEEEEECCEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCccCCCc
Q psy5025 145 YVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKV 224 (533)
Q Consensus 145 ~l~~~~~~g~~~~~v~s~~~lnDg~Wh~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~ 224 (533)
+|++.++.|++...+.+...++||+||+|.+.+.++.+.|.||+....... ++....+++...+||||+|.........
T Consensus 94 ~l~~~~~~g~g~~~~~~~~~~~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~-~g~~~~l~~~~~l~vGG~p~~~~~~~~~ 172 (394)
T 1dyk_A 94 FPYFSYDLGSGDTSTMIPTKINDGQWHKIKIVRVKQEGILYVDDASSQTIS-PKKADILDVVGILYVGGLPINYTTRRIG 172 (394)
T ss_dssp EEEEEEESSSCEEEEECCSCCCSSSCEEEEEEEETTEEEEEETTEEEEEEC-STTCCCCCCCSEEEESSCCTTCCCCSSC
T ss_pred EEEEEEECCCCceEEEcccccCCCCEEEEEEEEeCCEEEEEEcCcccceec-CCCCceecCCCCEEEcccCCcccccccc
Confidence 999999999888888888999999999999999999999999997644433 5556667777899999999764322222
Q ss_pred ccccCceeeeeeEEECcEEcccccccccCCCccCCCCCCCCCCCCCCeeeecCCceEEecCCCCCcCcccceeeeeecCC
Q psy5025 225 KIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHG 304 (533)
Q Consensus 225 ~~~~~F~GCI~~l~in~~~l~~~~~~~~~~~~~~C~~~C~~~pCngg~C~~~~~~~~C~C~~g~~G~~c~~~~~~~f~~~ 304 (533)
....+|.|||+++++|++.+++ .......++ +.|... ......| .+
T Consensus 173 ~~~~~F~GCi~~l~in~~~~~l-~~~~~~~~~--------------~~C~~~------------------~~~g~~F-~g 218 (394)
T 1dyk_A 173 PVTYSLDGCVRNLHMEQAPVDL-DQPTSSFHV--------------GTCFAN------------------AESGTYF-DG 218 (394)
T ss_dssp SCCSBCSEEEEEEEESSSCCCT-TSCSEEESC--------------BCCBSS------------------EEESEEE-EE
T ss_pred cCCCCccEeeeEEEECCEEecC-CCccccCcC--------------CCCCCC------------------CccCcee-CC
Confidence 3457899999999999999883 332222222 222110 0123456 67
Q ss_pred CeeEEecCccccccccccceeeeeeeeeeecceeeEEEEEEEeCCCCeEEEEeccCCCCCeEEEEEECCEEEEEEEcCCc
Q psy5025 305 ASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYNLGNG 384 (533)
Q Consensus 305 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~rt~~~~g~ll~~~~~~~~~~l~l~l~~g~l~~~~~~g~~ 384 (533)
.+|+.+..... ....++|+|.|||.+++|+|||... ...+|++|+|.+|+|++.++.|.+
T Consensus 219 ~gy~~~~~~~~-------------------~~~~~~is~~frT~~~~GlLl~~~~-~~~~~l~l~L~~G~l~~~~~~g~~ 278 (394)
T 1dyk_A 219 TGFAKAVGGFK-------------------VGLDLLVEFEFRTTRPTGVLLGVSS-QKMDGMGIEMIDEKLMFHVDNGAG 278 (394)
T ss_dssp EEEEECCSSBC-------------------CBSEEEEEEEEEESCSCEEEEEEEC-SSSCEEEEEEETTEEEEEEESSSC
T ss_pred CceeEEcCCcc-------------------cCCceEEEEEEEeCCCCEEEEEecC-CCCCEEEEEEECCEEEEEEECCCC
Confidence 88888652111 1346799999999999999999853 347999999999999999999877
Q ss_pred eEEEee---CceeecCCCeEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEecCCc
Q psy5025 385 EVLLEN---NQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGK 461 (533)
Q Consensus 385 ~~~~~~---~~~~~~dg~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~~~~ 461 (533)
...+.. ....++||+||+|.+.+ .++.+.|+||+...........
T Consensus 279 ~~~~~~~~~~~~~l~DG~WH~V~v~~--------------------------------~~~~~~L~VD~~~~~~~~~~~~ 326 (394)
T 1dyk_A 279 RFTAIYDAEIPGHMCNGQWHKVTAKK--------------------------------IKNRLELVVDGNQVDAQSPNSA 326 (394)
T ss_dssp CEEEEECCCSTTSTTSSSCEEEEEEE--------------------------------ETTEEEEEETTEEEEEECCCTT
T ss_pred cEEEEEecCCCccccCCceEEEEEEE--------------------------------eCCEEEEEECCcccccccCCCc
Confidence 655543 25789999999999999 8899999999987655443333
Q ss_pred ceeeccCCceEEcCCCCcccccccccccCceeeEEEEEEcC----ceEEeecccCc
Q psy5025 462 FEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSN----DYQVKLPLSRS 513 (533)
Q Consensus 462 ~~~l~~~~~l~lGg~~~~~~~~~~~~~~~f~GCi~~l~i~~----~~~l~~~~~~~ 513 (533)
...++....|||||+|............+|+|||++|+||+ .+++|+.....
T Consensus 327 ~~~l~~~~~lylGG~p~~~~~~~~~~~~~F~GCi~~v~in~~~~~~~~~d~~~a~~ 382 (394)
T 1dyk_A 327 STSADTNDPVFVGGFPGGLNQFGLTTNIRFRGCIRSLKLTKGTGKPLEVNFAKALE 382 (394)
T ss_dssp CCCBCCCBCCEESCCCTTCCCTTCSCCCCCEEEEEEEEEECTTSCCEECCGGGCSE
T ss_pred ceecccCCCEEEcCCCccccccccccCCCCceeeeEEEECCccCcccccchhHhhh
Confidence 45567777899999998654333346789999999999954 17888877654
No 7
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=100.00 E-value=3.4e-45 Score=382.30 Aligned_cols=381 Identities=17% Similarity=0.272 Sum_probs=256.6
Q ss_pred CCCCCCCCCCCeeeeCCCCceecCCCC-CCCCCccccccccccccCCceeEEEcCCcccccceeEEEEEEEecCCCeeEE
Q psy5025 46 KCNKTPCEHGGKCITTPGSSYCLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILL 124 (533)
Q Consensus 46 ~C~~~pC~NggtC~~~~~~y~C~C~~g-~~G~~Ce~~~~~~~~~F~g~syl~~~~~~~~~~~~~~ls~~FrT~~~dGlLl 124 (533)
.|+.++|+++++|++.... .|+.. |. ..+|.|.+|+.++..... ...+.|+|+|||.+++|+||
T Consensus 15 ~~~~~~C~~~~~C~p~~~~---~~~~~~~~-----------~~~F~g~~~~~~~f~~~~-~~~~~is~~FrT~~~~GlLl 79 (422)
T 1h30_A 15 SQDMDTCEDILPCVPFSVA---KSVKSLYL-----------GRMFSGTPVIRLRFKRLQ-PTRLVAEFDFRTFDPEGILL 79 (422)
T ss_dssp ETTTTEEEECCCSSCBCCC---EETTEEEC-----------CC-----CCEEEECCBSS-CCCCEEEEEEEECCSSEEEE
T ss_pred ccccCcCCCCCccCCcccc---cCccccee-----------eeEECCCceEEEEccCCC-CCceEEEEEEEeCCCCeEEE
Confidence 4778899999999887532 23332 22 358999988888653322 35789999999999999999
Q ss_pred EccccCCCCCCeEEEEEECCEEEEEEEcCCCceEEEeeccccCCCcEEEEEEEECCEEEEEEcCccCceeeCCCCceeee
Q psy5025 125 YNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLS 204 (533)
Q Consensus 125 ~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~~~v~s~~~lnDg~Wh~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~ 204 (533)
|.+... ..||++|+|.+|+|++.++.|++...+.+...++||+||+|.+.+.++.+.|.||+........++....++
T Consensus 80 y~~~~~--~~df~~l~L~~G~l~~~~~~g~~~~~~~~~~~~nDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~ 157 (422)
T 1h30_A 80 FAGGHQ--DSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPE 157 (422)
T ss_dssp EEESCT--TSEEEEEEEETTEEEEEEEETTEEEEEEEEEECCSSCCEEEEEEECSSEEEEEETTEEEEEEECCSCSSEEE
T ss_pred EECCCC--CCcEEEEEEECCEEEEEEECCCCcEEEecCceecCCCCEEEEEEEcCCEEEEEECCeeeEEeecCCcccccc
Confidence 998742 379999999999999999999877667778899999999999999999999999997655555666555565
Q ss_pred ---cCCCEEEcCcCCCCccCCCcccccCceeeeeeEEECcEEc-ccccccccCCCccCCCCCCCCCCCCCCeeeecCCce
Q psy5025 205 ---LSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHEL-NILGEAIQGVNVVNCAHPCITQPCGSGSCVPLYDGY 280 (533)
Q Consensus 205 ---~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in~~~l-~~~~~~~~~~~~~~C~~~C~~~pCngg~C~~~~~~~ 280 (533)
+...+||||+|.... ....+...+|.|||+++.+|+..+ + +.+......... | ...
T Consensus 158 ~~~~~~~lyvGG~p~~~~-~~~~~~~~~F~GCi~~v~i~~~~~~~-l~~~~~~~~~~~---------C-----~~~---- 217 (422)
T 1h30_A 158 RGLYHLNLTVGGIPFHEK-DLVQPINPRLDGCMRSWNWLNGEDTT-IQETVKVNTRMQ---------C-----FSV---- 217 (422)
T ss_dssp TTEEECEEEESSCSSCGG-GSSSCCCCCCCEEEEEEEEC----------CCCCCGGGS---------E-----ESS----
T ss_pred cccccceEEEecCccccc-ccccccCCCCeEEEEEeEECCccccc-hhhhhhcccCCC---------C-----CCc----
Confidence 567899999997653 222234578999999999966543 4 333222211222 2 110
Q ss_pred EEecCCCCCcCcccceeeeeecCCCeeEEecCccccccccccceeeeeeeeeeecceeeEEEEEEEeCCCCeEEEEeccC
Q psy5025 281 KCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSS 360 (533)
Q Consensus 281 ~C~C~~g~~G~~c~~~~~~~f~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~rt~~~~g~ll~~~~~ 360 (533)
++ ....| .+.+|+.|..+... +.... .......++|+|.|||++++|+|||.++.
T Consensus 218 ------------~~--~g~~F-~g~s~~~~~~~~~~---------lp~~~-~~~~~~~~~is~~fRT~~~~GlLl~~~~~ 272 (422)
T 1h30_A 218 ------------TE--RGSFY-PGSGFAFYSLDYMR---------TPLDV-GTESTWEVEVVAHIRPAADTGVLFALWAP 272 (422)
T ss_dssp ------------CB--SSEEE-CSSCCEEECCCCBC------------------CCBCEEEEEEEEESSSCEEEEEEEEG
T ss_pred ------------CC--CCceE-CCCeEEEEecCccc---------ccccc-ccccccceEEEEEEecCCCCEEEEEecCC
Confidence 00 12355 88899999754321 00000 00112467999999999999999998643
Q ss_pred CC-CCeEEEEEECCEE-------EEEEEcCCceEEEeeCceeecCCCeEEE--EEEEeeeeeecCCcccccCCcchhhhh
Q psy5025 361 QS-KDFLALGIHNGYA-------HVMYNLGNGEVLLENNQTKINNGVWHRL--TVHRNFMVVMHGSSHTRSNKSSKIEFK 430 (533)
Q Consensus 361 ~~-~~~l~l~l~~g~l-------~~~~~~g~~~~~~~~~~~~~~dg~wH~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (533)
.. .+|++|+|.+|++ .+.++.+++.. +. ....++||+||+| .+.+
T Consensus 273 ~~~~d~l~l~L~~G~le~~~~~~~l~~~~~~g~~-~~-~~~~l~DG~WH~V~~~l~~----------------------- 327 (422)
T 1h30_A 273 DLRAVPLSVALVDYHSTKKLKKQLVVLAVEHTAL-AL-MEIKVCDGQEHVVTVSLRD----------------------- 327 (422)
T ss_dssp GGTEEEEEEEEESCC-----CCCEEEEEETTEEE-EE-EECCTTSSCCEEEEEEEET-----------------------
T ss_pred CcCCCcEEEEEEcCccccccccceEEEEeCCeeE-EE-eeecccCCCEeEeEEEEEE-----------------------
Confidence 21 5899999999987 46777776653 33 3478999999999 7777
Q ss_pred hhhhccccccCcEEEEEECCceeeeEecC----Ccce----eeccCCceEEcCCCCcccccccccccCceeeEEEEEEcC
Q psy5025 431 CLSIQRLHRTGKQCLIRIDTDYSMQSISG----GKFE----QLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSN 502 (533)
Q Consensus 431 ~~~~~~~~~~~~~~~l~vD~~~~~~~~~~----~~~~----~l~~~~~l~lGg~~~~~~~~~~~~~~~f~GCi~~l~i~~ 502 (533)
.++. |+||+......... +... .++....|||||+|... ....+...+|+||| +|+| |
T Consensus 328 ---------~~~~--L~vD~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lyiGG~p~~~-~~~~~~~~~F~GCi-~l~i-n 393 (422)
T 1h30_A 328 ---------GEAT--LEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVP-VTSAPVTAFYRGCM-TLEV-N 393 (422)
T ss_dssp ---------TEEE--EEETTEECEESSCHHHHHHHHHHHHHHHTSCCEEEESCCCSCC-TTSSSCCSBCCEEE-EEEE-T
T ss_pred ---------eccE--EEEeCCccceeechhhcccchhhhhhhhccCCceEEcccCCCC-ccccCccCCccccE-EEEE-C
Confidence 5544 89998765442111 1111 14566689999999743 22334567899999 7999 8
Q ss_pred ceEEeecccCc-CCCCcccceeeecC
Q psy5025 503 DYQVKLPLSRS-QGSSCQLTCETLNT 527 (533)
Q Consensus 503 ~~~l~~~~~~~-~~~~c~~~~~~~~~ 527 (533)
+.++++..+.. ++..-.++|++...
T Consensus 394 g~~ldl~~a~~~~~~v~~~~Cp~~~~ 419 (422)
T 1h30_A 394 RRLLDLDEAAYKHSDITAHSCPPVEP 419 (422)
T ss_dssp TEECCGGGSSEECTTSBTTCBCCBCC
T ss_pred CEEecHHHHHHhcCCeecCCCCCccc
Confidence 89999987654 33222456655443
No 8
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=100.00 E-value=2.4e-42 Score=377.39 Aligned_cols=342 Identities=21% Similarity=0.376 Sum_probs=252.1
Q ss_pred ccccCCceeEEEcCCcccccceeEEEEEEEecCCCeeEEEccccCCCCCCeEEEEEECCEEEEEEEcCCCceEEEe-ecc
Q psy5025 86 VPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRS-SNP 164 (533)
Q Consensus 86 ~~~F~g~syl~~~~~~~~~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~~~v~s-~~~ 164 (533)
..+|+|++|+.|++ .........|+|+|||.+++|+|||.+... ..||++|+|.+|+|++.+++|++...+.. ...
T Consensus 12 ~~~F~g~~~~~y~p-~~~~~~~~~isl~FrT~~~~glLly~~~~~--~~dfl~l~L~~G~l~~~~~~G~g~~~l~~~~~~ 88 (608)
T 2wjs_A 12 SVSSGGDCVRTYRP-EIKKGSYNNIVVHVKTAVADNLLFYLGSAK--FIDFLAIEMRKGKVSFLWDVGSGVGRVEYPDLT 88 (608)
T ss_dssp BCC----CEEEECC-CCSCTTEEEEEEEEEESCSCEEEEEEECSS--CSCEEEEEEETTEEEEEEESSSCEEEEECCSCC
T ss_pred EEEcCCCeEEEecC-CCCCcccceEEEEEecCCCceEEEEeCCCC--CCcEEEEEEECCEEEEEEECCCCceEEeeCCcc
Confidence 46899999999986 334446789999999999999999998752 48999999999999999999998888876 468
Q ss_pred ccCCCcEEEEEEEECCEEEEEEcCccCc---------eeeCCCCceeeecC--CCEEEcCcCCCCccCCCcccccCceee
Q psy5025 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSS---------QILSPGPFTQLSLS--LSLYLGGVPDYNIVSPKVKIKSSFIGC 233 (533)
Q Consensus 165 lnDg~Wh~V~v~~~~~~~~L~VD~~~~~---------~~~~~~~~~~l~~~--~~l~vGG~p~~~~~~~~~~~~~~F~GC 233 (533)
++||+||+|.+.|.++.+.|.||+.... ....++....+++. ..+||||+|.....+... ...+|.||
T Consensus 89 ~~dg~WH~V~v~r~~~~~~l~Vd~~~~~~~~~~~~~~~~~~~g~~~~L~l~~~~~l~vGG~p~~~~~~~~~-~~~~F~GC 167 (608)
T 2wjs_A 89 IDDSYWYRIEASRTGRNGSISVRALDGPKASMVPSTYHSVSPPGYTILDVDANAMLFVGGLTGKIKKADAV-RVITFTGC 167 (608)
T ss_dssp CTTSCCEEEEEEEETTEEEEEEEESSSTTTTSCCCCEEEECCSSCCSCCCCSSCEEEESSCCTTSCCCTTC-CCCCCCEE
T ss_pred ccCCceEEEEEEEeCCEEEEEEecccCccccccccccccccCCcceeeccCCCCcEEeCCcCccccCCccc-ccCCccEE
Confidence 9999999999999999999999986532 23445555556654 569999999865443322 23789999
Q ss_pred eeeEEECcEEcccccccccCCCccCCCCCCCCCCCCCCeeeecCCceEEecCCCCCcCcccce-eeeeecCCCeeEEecC
Q psy5025 234 IQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPLYDGYKCVCTQSCKESHLTEV-MCASFDHGASFLHYLD 312 (533)
Q Consensus 234 I~~l~in~~~l~~~~~~~~~~~~~~C~~~C~~~pCngg~C~~~~~~~~C~C~~g~~G~~c~~~-~~~~f~~~~s~~~~~~ 312 (533)
|+++.+|++.+++ .+..... ..|. .| .+. ..|+.. ..++| .+.+|+.+..
T Consensus 168 i~~l~in~~~i~l-~~~~~~~--g~~~------gC--------------~~~-----p~~~~~~~~~~F-~g~sy~~~~~ 218 (608)
T 2wjs_A 168 MGETYFDNKPIGL-WNFREKE--GDCK------GC--------------TVS-----PQVEDSEGTIQF-DGEGYALVSR 218 (608)
T ss_dssp ECCCEESSSBC-----CCEEE--SCCC------CC---------------------------CCCCEEE-EEEEEEEEEC
T ss_pred EEEEEECCEEccc-ccccccc--CCCC------CC--------------CCC-----cccccCCcceEE-CCCcceEEec
Confidence 9999999999873 3322111 1221 12 111 122221 24788 6889998874
Q ss_pred ccccccccccceeeeeeeeeeecceeeEEEEEEEeCCCCeEEEEeccCCCCCeEEEEEECCEEEEEEEcCCceEEEeeCc
Q psy5025 313 PEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYNLGNGEVLLENNQ 392 (533)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~rt~~~~g~ll~~~~~~~~~~l~l~l~~g~l~~~~~~g~~~~~~~~~~ 392 (533)
+... .....+|+|+|||.+++|+|||.+.....+|++|+|.+|+|++.+++|++...+. +.
T Consensus 219 ~~~~------------------~~~~~~isl~FrT~~~~GlLl~~~~~~~~d~l~L~L~~G~l~~~~~~g~~~~~l~-s~ 279 (608)
T 2wjs_A 219 PIRW------------------YPNISTVMFKFRTFSSSALLMYLATRDLKDFMSVELSDGHVKVSYDLGSGMTSVV-SN 279 (608)
T ss_dssp CTTC------------------BTTEEEEEEEEEESCSEEEEEEEECTTSSSEEEEEEETTEEEEEEECSSCEEEEE-EE
T ss_pred cccC------------------CCcceEEEEEEEeCCCCeEEEEecCCCCCceEEEEEECCEEEEEEECCCCcEEEE-cC
Confidence 3210 1235789999999999999999875555799999999999999999998876655 56
Q ss_pred eeecCCCeEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCce-----eeeEecCCcceeec-
Q psy5025 393 TKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDY-----SMQSISGGKFEQLN- 466 (533)
Q Consensus 393 ~~~~dg~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~-----~~~~~~~~~~~~l~- 466 (533)
..++||+||+|.+.| .++.+.|+||+.. ......++....++
T Consensus 280 ~~~nDg~WH~V~v~r--------------------------------~~~~~~L~VD~~~~~~~~~~~~~~~g~~~~l~~ 327 (608)
T 2wjs_A 280 QNHNDGKWKAFTLSR--------------------------------IQKQANISIVDIDSNQEENVATSSSGNNFGLDL 327 (608)
T ss_dssp EECCSSSCEEEEEEE--------------------------------ETTEEEEEEEETTTCCEEEEEEECCSSCCCCCC
T ss_pred ccccCCceEEEEEEE--------------------------------ecceEEEEEeccccccccccccccCCccccccc
Confidence 789999999999999 8899999999743 22333444444555
Q ss_pred -cCCceEEcCCCCcccccccccccCceeeEEEEEEcCceEEeecccC
Q psy5025 467 -TDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLPLSR 512 (533)
Q Consensus 467 -~~~~l~lGg~~~~~~~~~~~~~~~f~GCi~~l~i~~~~~l~~~~~~ 512 (533)
....|||||+|.....+......+|+|||++|+| |+..+++....
T Consensus 328 ~~~~~lylGG~p~~~~~~~~~~~~~F~GCi~~v~i-n~~~~~l~~~~ 373 (608)
T 2wjs_A 328 KADDKIYFGGLPTLRNLRPEVNVKKYSGCLKDIEI-SRTPYNILSSP 373 (608)
T ss_dssp CTTCEEEESCCCCCSCCCTTCCCCCCEEEEEEEEE-TTEEECGGGCS
T ss_pred cCCCceEEeccCcccccCcccccCCceEEeeeEEE-CCEecCccccc
Confidence 3567999999986543333456799999999999 78889887653
No 9
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=100.00 E-value=1.1e-32 Score=286.84 Aligned_cols=229 Identities=22% Similarity=0.460 Sum_probs=181.5
Q ss_pred cCCccccCCCceEEEEEEeCce-eEEEEcCCCC---------------------c--------------eee--------
Q psy5025 3 KSDNQVILDDWNTVRVFRHRWD-AWIQLNDGNK---------------------I--------------KGR-------- 38 (533)
Q Consensus 3 ~s~~~v~d~~WH~v~~~r~~~~-~~l~vd~~~~---------------------~--------------~G~-------- 38 (533)
.++.+||||+||+|.++|+++. ++|.||+... + .||
T Consensus 79 ~s~~~vnDg~WH~V~v~r~~~~~~~l~VD~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~~~F~GCi~~l~ 158 (410)
T 3asi_A 79 SSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVD 158 (410)
T ss_dssp CCSSCSCSSSCEEEEEEECTTCEEEEEETTEEEEEECTTCCCCCBCSCEEESCCCGGGGGGSCTTCCCSSBCCEEEEEEE
T ss_pred ccCcEeCCCCeEEEEEEEcCCceEEEEECCEeceeccCCccceecCCceEECccccchhhhhhhhcccccCchhheehee
Confidence 3788999999999999999875 7899997432 0 011
Q ss_pred -------------------cCCCC--CCCCCCCCCCCCCeeeeCCCCceecCCC-CCCCCCccccccccccccC-CceeE
Q psy5025 39 -------------------SKECL--EDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFN-GSSYL 95 (533)
Q Consensus 39 -------------------~~~C~--~d~C~~~pC~NggtC~~~~~~y~C~C~~-g~~G~~Ce~~~~~~~~~F~-g~syl 95 (533)
..+|+ .+.|.++||+|||+|++.|++|.|.|+. +|+|+.|+.... ...|. +.+|+
T Consensus 159 ing~~~dl~~~~~~~~~~v~~gC~~~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~~~--~~~f~~~~~~~ 236 (410)
T 3asi_A 159 LNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGT--TYIFSKGGGQI 236 (410)
T ss_dssp SSSCCCCTTTTCSEEESSEEESCCCCSSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEECC--EEEEEEEEEEE
T ss_pred eCCcccCchhhhhccCCccCCCCCCCCCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCCCcc--cccccCCCceE
Confidence 13575 4789999999999999999999999996 999999998653 34564 67899
Q ss_pred EEcCCcc--cccceeEEEEEEEecCCCeeEEEccccCCCCCCeEEEEEECCEEEEEEEcCCCceEEEee-ccccCCCcEE
Q psy5025 96 RYQGLGE--QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS-NPISLGEWHK 172 (533)
Q Consensus 96 ~~~~~~~--~~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~~~v~s~-~~lnDg~Wh~ 172 (533)
.|..... .......++|.|||.+++|+|||.+.. .+..+|++|+|.+|+|++.++.|.+...+.+. ..++||+||+
T Consensus 237 ~~~~~~~~~~~~~~~~i~l~frT~~~~GlLl~~~~~-~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~~~~~l~DG~wH~ 315 (410)
T 3asi_A 237 TYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSS-SGLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHV 315 (410)
T ss_dssp EEECCTTCCCCBSEEEEEEEEECCCSEEEEEEEEEC-TTCCCEEEEEEETTEEEEEEESSSSCEEEECCSCCCCSSSCEE
T ss_pred EEecCCCCCccceeeEEEEEEEeCCCCEEEEEEecC-CCCCceEEEEEeCCEEEEEEECCCCceEEecCccCcCCCCeEE
Confidence 8864322 122346899999999999999998653 23479999999999999999998877777654 7899999999
Q ss_pred EEEEEECCEEEEEEcCccCceeeCCCC-ceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEECcEEc
Q psy5025 173 LRLTRTGRHAYLQVDRFPSSQILSPGP-FTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHEL 244 (533)
Q Consensus 173 V~v~~~~~~~~L~VD~~~~~~~~~~~~-~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in~~~l 244 (533)
|.+.+.++.+.|.||+........++. ...++....+||||.|.. .+|.|||+++.+|+..+
T Consensus 316 V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~~~~~~~~lylGG~p~~----------~~F~GCi~~v~ing~~~ 378 (410)
T 3asi_A 316 VRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQG----------QPFQGQLSGLYYNGLKV 378 (410)
T ss_dssp EEEEEETTEEEEEETTSCCEEECCSSCCCCCBCCEEEEEESSTTTT----------CCCCEEEEEEEETTBCH
T ss_pred EEEEEECCEEEEEECCcceecccCCCccceeeeccceEEECCcccC----------CCCEEEEEEEEECCHHH
Confidence 999999999999999976544433321 223444567999999853 68999999999999864
No 10
>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A
Probab=99.95 E-value=1.2e-26 Score=217.53 Aligned_cols=185 Identities=26% Similarity=0.494 Sum_probs=145.0
Q ss_pred CCCCCCCccccccccccccCCceeEEEcCCcc--------------cccceeEEEEEEEecCCCeeEEEccccCCCCCCe
Q psy5025 71 LGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGE--------------QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDF 136 (533)
Q Consensus 71 ~g~~G~~Ce~~~~~~~~~F~g~syl~~~~~~~--------------~~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~f 136 (533)
.+|.++.|+.. .++|+|.||++|+.... .....++|+|+|||.+++|+|||.+.. .+..||
T Consensus 3 ~~~e~~~~~~~----~~~F~G~sy~~~~~~~~~~~~~l~~~~~~~~~~~~~~~is~~frT~~~~GlLl~~g~~-~~~~df 77 (204)
T 1pz7_A 3 VIIEKAAGDAE----AIAFDGRTYMEYHNAVTKSPDALDYPAEPSEKALQSNHFELSIKTEATQGLILWSGKG-LERSDY 77 (204)
T ss_dssp ----CTTSSSC----CEEEESSCCEEEECCSCCC-------CCSSCEEESEEEEEEEEEECCSSEEEEEESCC-STTCCE
T ss_pred ccccccccccc----ceeECCceeEEEcCcccccccccccccccccccceeEEEEEEEEcCCCCeEEEEeCCC-CCCCCe
Confidence 46788999987 68999999999985421 112467899999999999999998753 124799
Q ss_pred EEEEEECCEEEEEEEcCCCceEEEeeccccCCCcEEEEEEEECCEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCC
Q psy5025 137 IALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPD 216 (533)
Q Consensus 137 l~l~L~~G~l~~~~~~g~~~~~v~s~~~lnDg~Wh~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~ 216 (533)
++|+|.+|+|++.++.|+++..+.+...++||+||+|.+.+.++.+.|.||+........++....++....+||||+|.
T Consensus 78 l~l~L~~G~l~~~~~~G~g~~~v~s~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~ 157 (204)
T 1pz7_A 78 IALAIVDGFVQMMYDLGSKPVVLRSTVPINTNHWTHIKAYRVQREGSLQVGNEAPITGSSPLGATQLDTDGALWLGGMER 157 (204)
T ss_dssp EEEEEETTEEEEEEESSSCCEEEEEEEECCSSSCEEEEEEEETTEEEEEETTSCCEEEECCSSCCCEEECCEEEESSCSC
T ss_pred EEEEEECCEEEEEEECCCCeEEEECCcccCCCCeEEEEEEEeCCEEEEEECCcceEEEECCCCCceEcCCCCEEEecCCC
Confidence 99999999999999999888888888999999999999999999999999997766666666677788888999999997
Q ss_pred CCccCC-CcccccCceeeeeeEEECcEEcccccccccCCCccCCC
Q psy5025 217 YNIVSP-KVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA 260 (533)
Q Consensus 217 ~~~~~~-~~~~~~~F~GCI~~l~in~~~l~~~~~~~~~~~~~~C~ 260 (533)
...... ......+|.|||++|++|++.+++...+....++.+||
T Consensus 158 ~~~~~~~~~~~~~~F~GCi~~l~in~~~~dl~~~~~~~~~v~~C~ 202 (204)
T 1pz7_A 158 LSVAHKLPKAYSTGFIGCIRDVIVDRQELHLVEDALNNPTILHCS 202 (204)
T ss_dssp CSTTTTSCGGGGSBCEEEEEEEEETTEECCTTTSCSSCCCCCBC-
T ss_pred cccccccccccCCCceEEEEEEEECCEEccchhhhhcCCCCCCCC
Confidence 542111 11235789999999999999999544444444455564
No 11
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=99.95 E-value=4.2e-27 Score=242.59 Aligned_cols=243 Identities=21% Similarity=0.254 Sum_probs=160.1
Q ss_pred ccCCccccCCCceEEEEEEeCceeEEEEcCCCCceee---------------cCCCCCCCCC---CCCCCCCCeeeeCC-
Q psy5025 2 VKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGR---------------SKECLEDKCN---KTPCEHGGKCITTP- 62 (533)
Q Consensus 2 ~~s~~~v~d~~WH~v~~~r~~~~~~l~vd~~~~~~G~---------------~~~C~~d~C~---~~pC~NggtC~~~~- 62 (533)
|+++.+|+||+||+|.+.|+++.++|.||+.....+. ..+-+.+.=. ...-.+---|+...
T Consensus 94 ~~~~~~~~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCi~~l~ 173 (383)
T 2jd4_A 94 VSHPALLSDGKWHTVKTEYIKRKAFMTVDGQESPSVTVVGKATTLDVERKLYLGGLPSHYRARNIGTITHSIPACIGEIM 173 (383)
T ss_dssp EECCCCCTTSSCEEEEEEEETTEEEEEETTEECCCEECCSSCCCCCCCSEEEESSCCTTCCCCSSCSCCSBCCEEEEEEE
T ss_pred EeCcceecCCCcEEEEEEEeCCEEEEEEcCccccceecCCCcceecCCCCeEEeccCcccccccccccCCCceEEeEEEE
Confidence 5678899999999999999999999999996551110 1111100000 00011223444432
Q ss_pred -CCceecC--C-CCCCCCCccccccccccccCCceeEEEcCCcccccceeEEEEEEEecCCCeeEEEccccCCCCCCeEE
Q psy5025 63 -GSSYCLC--P-LGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIA 138 (533)
Q Consensus 63 -~~y~C~C--~-~g~~G~~Ce~~~~~~~~~F~g~syl~~~~~~~~~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~ 138 (533)
++-.-.= + ..+.+..|..... ....|.|.+|+.+..........+.|+|+|||.+++|+|||.+.. ..+|++
T Consensus 174 in~~~l~l~~~~~~~~~~~C~~~~~-~g~~F~g~sy~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~~~~---~~d~l~ 249 (383)
T 2jd4_A 174 VNGQQLDKDRPLSASAVDRCYVVAQ-EGTFFEGSGYAALVKEGYKVRLDLQITLEFRTTSKNGVLLGISSA---KVDAIG 249 (383)
T ss_dssp ETTEECCTTSCSEEESCBCCBSSEE-SSEEEEEEEEEEEEEEEECCBSCEEEEEEEEESCSCEEEEEEECS---SSCEEE
T ss_pred ECCEEeccCCccccCccccccCcCc-cCceECCCeEEEEecCccccCCceEEEEEEEeCCCCEEEEEecCC---CCcEEE
Confidence 1110000 0 0112334654321 145789999999942222233467999999999999999998653 379999
Q ss_pred EEEECCEEEEEEEcCCCceEEEe----eccccCCCcEEEEEEEECCEEEEEEcCccCceeeCCCCceeeecCCCEEEcCc
Q psy5025 139 LYLNDRYVDFTFDLGTGAATLRS----SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGV 214 (533)
Q Consensus 139 l~L~~G~l~~~~~~g~~~~~v~s----~~~lnDg~Wh~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~ 214 (533)
|+|.+|+|++.++.|.+...+.. ...++||+||+|.+.+.++.+.|.||+........+.....++....+||||+
T Consensus 250 l~L~~G~l~~~~~~g~g~~~~~~~~~~~~~l~DG~WH~V~l~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~ 329 (383)
T 2jd4_A 250 LEIVDGKVLFHVNNGAGRITATYQPRAARALCDGKWHTLQAHKSKHRIVLTVDGNSVRAESPHTHSTSADTNDPIYVGGY 329 (383)
T ss_dssp EEEETTEEEEEEESSSCEEEEEECCSSTTGGGSSSCEEEEEEEETTEEEEEETTEEEEEC----CCCCBCCCEEEEESCC
T ss_pred EEEECCEEEEEEECCCCcEEEEEecCCCccccCCCcEEEEEEEcCCEEEEEECCeecccccCCCCcccccCCCCEEEecc
Confidence 99999999999999877655543 35799999999999999999999999975443333323345666678999999
Q ss_pred CCCCccCCCcccccCceeeeeeEEECcEE----ccccccc
Q psy5025 215 PDYNIVSPKVKIKSSFIGCIQKVLINNHE----LNILGEA 250 (533)
Q Consensus 215 p~~~~~~~~~~~~~~F~GCI~~l~in~~~----l~~~~~~ 250 (533)
|..... .......+|.|||+++++|+.+ ++ +.++
T Consensus 330 p~~~~~-~~~~~~~~F~GCi~~v~in~~~~~~~~d-l~~~ 367 (383)
T 2jd4_A 330 PAHIKQ-NSLSSRASFRGCVRNLRLSRGSQVQSLD-LSRA 367 (383)
T ss_dssp CTTSCC-TTCSCCCBCEEEEEEEEEC---CCEECC-GGGC
T ss_pred cccccc-CCccccCCCceEccEEEECCCCcccccC-hhhH
Confidence 976432 2234457899999999999974 66 4443
No 12
>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} PDB: 3v65_A
Probab=99.94 E-value=1.1e-25 Score=208.53 Aligned_cols=174 Identities=25% Similarity=0.472 Sum_probs=142.6
Q ss_pred ccccCCceeEEEcCCccc-----------ccceeEEEEEEEecCCCeeEEEccccCCCCCCeEEEEEECCEEEEEEEcCC
Q psy5025 86 VPQFNGSSYLRYQGLGEQ-----------YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT 154 (533)
Q Consensus 86 ~~~F~g~syl~~~~~~~~-----------~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~ 154 (533)
.++|+|+||++|+..... ......|+|+|||.+++|+|||.+... +..||++|+|.+|+|++.++.|+
T Consensus 4 ~~~F~G~sy~~y~~~~~~~~~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~~~~~-~~~d~l~l~L~~G~l~~~~~~G~ 82 (191)
T 3v64_A 4 TLAFDGRTYIEYLNAVIESELTNEIPAEKALQSNHFELSLRTEATQGLVLWIGKAA-ERADYMALAIVDGHLQLSYDLGS 82 (191)
T ss_dssp EEEEESSCCEEEECSCCCHHHHCCCCCCEEESEEEEEEEEECSCSSEEEEEESCCS-TTCCEEEEEEETTEEEEEEESSS
T ss_pred cceecCceeEEEccccccccccccccccccccceEEEEEEEeCCCCeEEEEeCCCC-CCCcEEEEEEECCEEEEEEECCC
Confidence 578999999999864221 234689999999999999999987631 24799999999999999999998
Q ss_pred CceEEEeeccccCCCcEEEEEEEECCEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCccCC-CcccccCceee
Q psy5025 155 GAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSP-KVKIKSSFIGC 233 (533)
Q Consensus 155 ~~~~v~s~~~lnDg~Wh~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~-~~~~~~~F~GC 233 (533)
+...+++..+++||+||+|.+.+.++.+.|.||+........++....++....+||||+|....... ......+|.||
T Consensus 83 ~~~~l~s~~~v~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~~~~~~~~~~~~~~F~GC 162 (191)
T 3v64_A 83 QPVVLRSTVKVNTNRWLRIRAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQALPKAYGTGFVGC 162 (191)
T ss_dssp CCEEEEEEEECTTSSCEEEEEEEETTEEEEEETTSCCEEEECCTTCCCEEECSEEEESCCSSCCSSCCSCGGGTSBCEEE
T ss_pred ccEEEecCccccCCCCEEEEEEEeCCEEEEEECCeeeEeEECCCCcceeccCCceEEcccCcccccccccccccCCceEE
Confidence 88888888899999999999999999999999998766666777777788888999999997543211 11245789999
Q ss_pred eeeEEECcEEcccccccccCCCccCCC
Q psy5025 234 IQKVLINNHELNILGEAIQGVNVVNCA 260 (533)
Q Consensus 234 I~~l~in~~~l~~~~~~~~~~~~~~C~ 260 (533)
|+++++|++++++...+....++.+|+
T Consensus 163 i~~l~in~~~l~l~~~~~~~~~~~gC~ 189 (191)
T 3v64_A 163 LRDVVVGHRQLHLLEDAVTKPELRPCP 189 (191)
T ss_dssp EEEEEETTEECCTTTTCSBCCCCCCCS
T ss_pred eeEEEECCEEccchhHHhcCCCCCCCC
Confidence 999999999999666555556666775
No 13
>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus}
Probab=99.94 E-value=1.5e-25 Score=207.39 Aligned_cols=170 Identities=41% Similarity=0.709 Sum_probs=137.6
Q ss_pred ccccCCceeEEEcCCccc---ccceeEEEEEEEecCCCeeEEEccccCCCCCCeEEEEEECCEEEEEEEcCCCceEEEee
Q psy5025 86 VPQFNGSSYLRYQGLGEQ---YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162 (533)
Q Consensus 86 ~~~F~g~syl~~~~~~~~---~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~~~v~s~ 162 (533)
+++|.|.||++|+.+... ....+.|+|+|||.+++|+|||.+....+..||++|+|.+|+|.+.++.|++...+++.
T Consensus 11 ~~~F~g~syl~~~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~~~~~~~~~d~l~l~L~~G~l~~~~~~G~g~~~l~s~ 90 (189)
T 3pve_A 11 LADFNGFSYLELKGLHTFERDLGEKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHNRHLEFRYDLGKGAAIIRSK 90 (189)
T ss_dssp CEEEESSCEEEECCGGGC-------CEEEEEEEESSSCEEEEEEESCC-CCSCEEEEEEETTEEEEEEESSSCEEEEECS
T ss_pred eeEECCCceEEEcCcccccccccceEEEEEEEEeCCCCEEEEEecCCCCCCCCeEEEEEECCEEEEEEecCCCCEEEEcC
Confidence 689999999999987531 13468999999999999999999864233489999999999999999999888888888
Q ss_pred ccccCCCcEEEEEEEECCEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEECcE
Q psy5025 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNH 242 (533)
Q Consensus 163 ~~lnDg~Wh~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in~~ 242 (533)
..++||+||+|.+.+.++.+.|.||+........++....+++...+||||+|.....+.......+|.|||+++++|++
T Consensus 91 ~~l~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~GCi~~v~ing~ 170 (189)
T 3pve_A 91 EPIALGTWVRVFLERNGRKGALQVGDGPRVLGESPVPHTMLNLKEPLYVGGAPDFSKLARGAAVASGFDGAIQLVSLRGH 170 (189)
T ss_dssp SCCCTTSEEEEEEEEETTEEEEEETTSCCEEEECCSSCCCCCCCSCEEESCCSCGGGSCGGGCCCSBCEEEEEEEEETTE
T ss_pred cccCCCCEEEEEEEEeCCEEEEEECCceeEeEEcCCCcceecCCCCEEECCcCchhhcccccccCCCCcEEceEEEECCE
Confidence 99999999999999999999999999876666666667777888899999999765433333456899999999999999
Q ss_pred EcccccccccCCC
Q psy5025 243 ELNILGEAIQGVN 255 (533)
Q Consensus 243 ~l~~~~~~~~~~~ 255 (533)
.+++........+
T Consensus 171 ~l~~~~~~~~~~~ 183 (189)
T 3pve_A 171 QLLTQEHVLRAVD 183 (189)
T ss_dssp ECCBGGGEEEEES
T ss_pred EccChhhcccccc
Confidence 9963333333333
No 14
>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A
Probab=99.94 E-value=2.8e-25 Score=208.26 Aligned_cols=186 Identities=24% Similarity=0.466 Sum_probs=137.8
Q ss_pred CCCcCcccceeeeeecCCCeeEEecCccccccccccce-eeeeeeeeeecceeeEEEEEEEeCCCCeEEEEeccC-CCCC
Q psy5025 287 SCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHY-KFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSS-QSKD 364 (533)
Q Consensus 287 g~~G~~c~~~~~~~f~~~~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~rt~~~~g~ll~~~~~-~~~~ 364 (533)
+|+++.|+. ..++| .+.||+.|........ ..+++ .++ .......++|+|+|||.+++|+|||.+.. ...+
T Consensus 4 ~~e~~~~~~-~~~~F-~G~sy~~~~~~~~~~~-~~l~~~~~~----~~~~~~~~~is~~frT~~~~GlLl~~g~~~~~~d 76 (204)
T 1pz7_A 4 IIEKAAGDA-EAIAF-DGRTYMEYHNAVTKSP-DALDYPAEP----SEKALQSNHFELSIKTEATQGLILWSGKGLERSD 76 (204)
T ss_dssp ---CTTSSS-CCEEE-ESSCCEEEECCSCCC--------CCS----SCEEESEEEEEEEEEECCSSEEEEEESCCSTTCC
T ss_pred ccccccccc-cceeE-CCceeEEEcCcccccc-ccccccccc----ccccceeEEEEEEEEcCCCCeEEEEeCCCCCCCC
Confidence 567777775 35788 8899999985421000 00000 000 00112467899999999999999998642 2479
Q ss_pred eEEEEEECCEEEEEEEcCCceEEEeeCceeecCCCeEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEE
Q psy5025 365 FLALGIHNGYAHVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQC 444 (533)
Q Consensus 365 ~l~l~l~~g~l~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (533)
|++|+|.+|+|++.++.|++...+. +..+++||+||+|.+.| .++.+
T Consensus 77 fl~l~L~~G~l~~~~~~G~g~~~v~-s~~~lnDg~WH~V~v~r--------------------------------~~~~~ 123 (204)
T 1pz7_A 77 YIALAIVDGFVQMMYDLGSKPVVLR-STVPINTNHWTHIKAYR--------------------------------VQREG 123 (204)
T ss_dssp EEEEEEETTEEEEEEESSSCCEEEE-EEEECCSSSCEEEEEEE--------------------------------ETTEE
T ss_pred eEEEEEECCEEEEEEECCCCeEEEE-CCcccCCCCeEEEEEEE--------------------------------eCCEE
Confidence 9999999999999999998876665 66899999999999999 88999
Q ss_pred EEEECCceeeeEecCCcceeeccCCceEEcCCCCcccccc--cccccCceeeEEEEEEcCceEEeecccCc
Q psy5025 445 LIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTR--SKYHHSFKGWISNLILSNDYQVKLPLSRS 513 (533)
Q Consensus 445 ~l~vD~~~~~~~~~~~~~~~l~~~~~l~lGg~~~~~~~~~--~~~~~~f~GCi~~l~i~~~~~l~~~~~~~ 513 (533)
+|+||+........++....++....|||||+|....... .....+|+|||++|+| |++.+++...+.
T Consensus 124 ~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~~~~~~~~~~~~~~F~GCi~~l~i-n~~~~dl~~~~~ 193 (204)
T 1pz7_A 124 SLQVGNEAPITGSSPLGATQLDTDGALWLGGMERLSVAHKLPKAYSTGFIGCIRDVIV-DRQELHLVEDAL 193 (204)
T ss_dssp EEEETTSCCEEEECCSSCCCEEECCEEEESSCSCCSTTTTSCGGGGSBCEEEEEEEEE-TTEECCTTTSCS
T ss_pred EEEECCcceEEEECCCCCceEcCCCCEEEecCCCcccccccccccCCCceEEEEEEEE-CCEEccchhhhh
Confidence 9999998776666666667788888999999998643211 1246789999999999 789999987654
No 15
>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} PDB: 3sh5_A
Probab=99.94 E-value=1.3e-25 Score=208.82 Aligned_cols=168 Identities=31% Similarity=0.583 Sum_probs=135.6
Q ss_pred eeeeecCCCeeEEecCccccccccccceeeeeeeeeeecceeeEEEEEEEeCCCCeEEEEecc-----CCCCCeEEEEEE
Q psy5025 297 MCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGS-----SQSKDFLALGIH 371 (533)
Q Consensus 297 ~~~~f~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~rt~~~~g~ll~~~~-----~~~~~~l~l~l~ 371 (533)
..+.| .++||++++.+... ........+|+|+|||.+++|+|||.+. ....+|++|+|.
T Consensus 6 ~~~~F-~G~syl~lp~~~~~---------------~~~~~~~~~is~~frT~~~~GlLl~~~~~~~~~~~~~d~l~l~L~ 69 (195)
T 3sh4_A 6 YGAYF-HDDGFLAFPGHVFS---------------RSLPEVPETIELEVRTSTASGLLLWQGVEVGEAGQGKDFISLGLQ 69 (195)
T ss_dssp TEEEE-EEEEEEEECGGGGC---------------CCSTTCCEEEEEEEEECCSSEEEEEECCCTTCTTSTTCEEEEEEE
T ss_pred ccCEE-CCCEEEEEcccccc---------------ccccccceEEEEEEEeCCCCcEEEEecccccCCCCCCcEEEEEEe
Confidence 35677 78999999976432 1111335799999999999999999863 234789999999
Q ss_pred CCEEEEEEEcCCceEEEeeCceeecCCCeEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCc
Q psy5025 372 NGYAHVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTD 451 (533)
Q Consensus 372 ~g~l~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~ 451 (533)
+|+|++.++.|++...+. +...++||+||+|.+.| .++.+.|+||+.
T Consensus 70 ~G~l~~~~~~G~g~~~~~-s~~~l~Dg~WH~V~v~r--------------------------------~~~~~~L~VD~~ 116 (195)
T 3sh4_A 70 DGHLVFRYQLGSGEARLV-SEDPINDGEWHRVTALR--------------------------------EGRRGSIQVDGE 116 (195)
T ss_dssp TTEEEEEEECSSCEEEEE-EEEECCSSSCEEEEEEE--------------------------------ETTEEEEEETTC
T ss_pred CCEEEEEEECCCCcEEEE-cCceeCCCCeEEEEEEE--------------------------------eCCEEEEEECCe
Confidence 999999999998876665 67889999999999999 999999999999
Q ss_pred eeeeEecCCcceeeccCCceEEcCCCCcccccccccccCceeeEEEEEEcC-------ceEEeecccCc
Q psy5025 452 YSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSN-------DYQVKLPLSRS 513 (533)
Q Consensus 452 ~~~~~~~~~~~~~l~~~~~l~lGg~~~~~~~~~~~~~~~f~GCi~~l~i~~-------~~~l~~~~~~~ 513 (533)
.......++....++.+..|||||+|.....+......+|.|||++|+||+ ++.||+...+.
T Consensus 117 ~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~F~GCi~~l~in~~~~~~~~~~~ldl~~~a~ 185 (195)
T 3sh4_A 117 ELVSGRSPGPNVAVNAKGSVYIGGAPDVATLTGGRFSSGITGCVKNLVLHSARPGAPPPQPLDLQHRAQ 185 (195)
T ss_dssp CCEEEECCSSCCCCCCCSCEEESCCTTHHHHTTTSCCCCCSEEEEEEEEEECCTTCCCCCCCCTTTSCS
T ss_pred eeeeeeCCCCcccccCCCCEEECCCCCcccccccccccCCEEEEEEEEECCcCCCCCCceeecchhhhc
Confidence 877666666666788888899999997654334456789999999999964 67888887654
No 16
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=99.93 E-value=2.5e-25 Score=230.08 Aligned_cols=242 Identities=17% Similarity=0.248 Sum_probs=162.8
Q ss_pred ccCCccccCCCceEEEEEEeCceeEEEEcCCCCcee--------------ecCCCCCCCCC---CCCCCCCCeeeeCC--
Q psy5025 2 VKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKG--------------RSKECLEDKCN---KTPCEHGGKCITTP-- 62 (533)
Q Consensus 2 ~~s~~~v~d~~WH~v~~~r~~~~~~l~vd~~~~~~G--------------~~~~C~~d~C~---~~pC~NggtC~~~~-- 62 (533)
|+++.+||||+||+|.+.|+++.++|.||+...... |..+-+...=. ...-.+.--|+...
T Consensus 108 ~~~~~~~~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~g~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCi~~l~i 187 (394)
T 1dyk_A 108 TMIPTKINDGQWHKIKIVRVKQEGILYVDDASSQTISPKKADILDVVGILYVGGLPINYTTRRIGPVTYSLDGCVRNLHM 187 (394)
T ss_dssp EECCSCCCSSSCEEEEEEEETTEEEEEETTEEEEEECSTTCCCCCCCSEEEESSCCTTCCCCSSCSCCSBCSEEEEEEEE
T ss_pred EEcccccCCCCEEEEEEEEeCCEEEEEEcCcccceecCCCCceecCCCCEEEcccCCcccccccccCCCCccEeeeEEEE
Confidence 567889999999999999999999999998544100 11111100000 00011233455432
Q ss_pred CCceec-C-C-CCCCCCCccccccccccccCCceeEEEcCCcccccceeEEEEEEEecCCCeeEEEccccCCCCCCeEEE
Q psy5025 63 GSSYCL-C-P-LGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIAL 139 (533)
Q Consensus 63 ~~y~C~-C-~-~g~~G~~Ce~~~~~~~~~F~g~syl~~~~~~~~~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~l 139 (533)
++..=. = + ..+.+..|..... ....|.+.+|+.+.. .........|+|+|||.+++|+|||.... ..+|++|
T Consensus 188 n~~~~~l~~~~~~~~~~~C~~~~~-~g~~F~g~gy~~~~~-~~~~~~~~~is~~frT~~~~GlLl~~~~~---~~~~l~l 262 (394)
T 1dyk_A 188 EQAPVDLDQPTSSFHVGTCFANAE-SGTYFDGTGFAKAVG-GFKVGLDLLVEFEFRTTRPTGVLLGVSSQ---KMDGMGI 262 (394)
T ss_dssp SSSCCCTTSCSEEESCBCCBSSEE-ESEEEEEEEEEECCS-SBCCBSEEEEEEEEEESCSCEEEEEEECS---SSCEEEE
T ss_pred CCEEecCCCccccCcCCCCCCCCc-cCceeCCCceeEEcC-CcccCCceEEEEEEEeCCCCEEEEEecCC---CCCEEEE
Confidence 111000 0 0 0122345764421 135688999998752 22223468999999999999999998532 3799999
Q ss_pred EEECCEEEEEEEcCCCceEEEe----eccccCCCcEEEEEEEECCEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcC
Q psy5025 140 YLNDRYVDFTFDLGTGAATLRS----SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVP 215 (533)
Q Consensus 140 ~L~~G~l~~~~~~g~~~~~v~s----~~~lnDg~Wh~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p 215 (533)
+|.+|+|.+.++.+.+...+.. ...++||+||+|.+.+.++.+.|.||+..............++....+||||.|
T Consensus 263 ~L~~G~l~~~~~~g~~~~~~~~~~~~~~~l~DG~WH~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p 342 (394)
T 1dyk_A 263 EMIDEKLMFHVDNGAGRFTAIYDAEIPGHMCNGQWHKVTAKKIKNRLELVVDGNQVDAQSPNSASTSADTNDPVFVGGFP 342 (394)
T ss_dssp EEETTEEEEEEESSSCCEEEEECCCSTTSTTSSSCEEEEEEEETTEEEEEETTEEEEEECCCTTCCCBCCCBCCEESCCC
T ss_pred EEECCEEEEEEECCCCcEEEEEecCCCccccCCceEEEEEEEeCCEEEEEECCcccccccCCCcceecccCCCEEEcCCC
Confidence 9999999999999877655543 568999999999999999999999999654433333334445666789999999
Q ss_pred CCCccCCCcccccCceeeeeeEEECc-----EEccccccc
Q psy5025 216 DYNIVSPKVKIKSSFIGCIQKVLINN-----HELNILGEA 250 (533)
Q Consensus 216 ~~~~~~~~~~~~~~F~GCI~~l~in~-----~~l~~~~~~ 250 (533)
.... ........+|.|||+++++|+ ++++ +.++
T Consensus 343 ~~~~-~~~~~~~~~F~GCi~~v~in~~~~~~~~~d-~~~a 380 (394)
T 1dyk_A 343 GGLN-QFGLTTNIRFRGCIRSLKLTKGTGKPLEVN-FAKA 380 (394)
T ss_dssp TTCC-CTTCSCCCCCEEEEEEEEEECTTSCCEECC-GGGC
T ss_pred cccc-ccccccCCCCceeeeEEEECCccCcccccc-hhHh
Confidence 7643 222345688999999999988 6787 4443
No 17
>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} PDB: 3v65_A
Probab=99.93 E-value=9.8e-25 Score=202.24 Aligned_cols=176 Identities=23% Similarity=0.466 Sum_probs=136.7
Q ss_pred eeeecCCCeeEEecCccccccccccceeeeeeeeeeecceeeEEEEEEEeCCCCeEEEEeccC-CCCCeEEEEEECCEEE
Q psy5025 298 CASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSS-QSKDFLALGIHNGYAH 376 (533)
Q Consensus 298 ~~~f~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~rt~~~~g~ll~~~~~-~~~~~l~l~l~~g~l~ 376 (533)
.++| .|.||+.|........... .+ .........+|+|+|||.+++|+|||.+.. ...+|++|+|.+|+|+
T Consensus 4 ~~~F-~G~sy~~y~~~~~~~~~~~---~~----~~~~~~~~~~isl~frT~~~~GlLl~~~~~~~~~d~l~l~L~~G~l~ 75 (191)
T 3v64_A 4 TLAF-DGRTYIEYLNAVIESELTN---EI----PAEKALQSNHFELSLRTEATQGLVLWIGKAAERADYMALAIVDGHLQ 75 (191)
T ss_dssp EEEE-ESSCCEEEECSCCCHHHHC---CC----CCCEEESEEEEEEEEECSCSSEEEEEESCCSTTCCEEEEEEETTEEE
T ss_pred ccee-cCceeEEEccccccccccc---cc----cccccccceEEEEEEEeCCCCeEEEEeCCCCCCCcEEEEEEECCEEE
Confidence 5788 8999999986532100000 00 001123468999999999999999998752 2479999999999999
Q ss_pred EEEEcCCceEEEeeCceeecCCCeEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeE
Q psy5025 377 VMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQS 456 (533)
Q Consensus 377 ~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~ 456 (533)
+.++.|++...+. +..+++||+||+|.+.| .++.+.|+||+......
T Consensus 76 ~~~~~G~~~~~l~-s~~~v~Dg~WH~V~v~r--------------------------------~~~~~~L~VD~~~~~~~ 122 (191)
T 3v64_A 76 LSYDLGSQPVVLR-STVKVNTNRWLRIRAHR--------------------------------EHREGSLQVGNEAPVTG 122 (191)
T ss_dssp EEEESSSCCEEEE-EEEECTTSSCEEEEEEE--------------------------------ETTEEEEEETTSCCEEE
T ss_pred EEEECCCccEEEe-cCccccCCCCEEEEEEE--------------------------------eCCEEEEEECCeeeEeE
Confidence 9999998877666 56789999999999999 88999999999877666
Q ss_pred ecCCcceeeccCCceEEcCCCCccccc--ccccccCceeeEEEEEEcCceEEeecccCcCC
Q psy5025 457 ISGGKFEQLNTDSGLYVGGVEDIEELT--RSKYHHSFKGWISNLILSNDYQVKLPLSRSQG 515 (533)
Q Consensus 457 ~~~~~~~~l~~~~~l~lGg~~~~~~~~--~~~~~~~f~GCi~~l~i~~~~~l~~~~~~~~~ 515 (533)
..++....++.+..|||||+|...... ......+|+|||++|+| |+.++++...+...
T Consensus 123 ~~~~~~~~l~~~~~lylGG~p~~~~~~~~~~~~~~~F~GCi~~l~i-n~~~l~l~~~~~~~ 182 (191)
T 3v64_A 123 SSPLGATQLDTDGALWLGGLQKLPVGQALPKAYGTGFVGCLRDVVV-GHRQLHLLEDAVTK 182 (191)
T ss_dssp ECCTTCCCEEECSEEEESCCSSCCSSCCSCGGGTSBCEEEEEEEEE-TTEECCTTTTCSBC
T ss_pred ECCCCcceeccCCceEEcccCcccccccccccccCCceEEeeEEEE-CCEEccchhHHhcC
Confidence 666667778888899999998864321 11346789999999999 89999999887543
No 18
>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} PDB: 3sh5_A
Probab=99.93 E-value=4.3e-25 Score=205.35 Aligned_cols=174 Identities=29% Similarity=0.520 Sum_probs=138.8
Q ss_pred ccccCCceeEEEcCCcccc---cceeEEEEEEEecCCCeeEEEcccc---CCCCCCeEEEEEECCEEEEEEEcCCCceEE
Q psy5025 86 VPQFNGSSYLRYQGLGEQY---LSLLDLTIVFKAIEPNGILLYNGHR---ADGVGDFIALYLNDRYVDFTFDLGTGAATL 159 (533)
Q Consensus 86 ~~~F~g~syl~~~~~~~~~---~~~~~ls~~FrT~~~dGlLl~~~~~---~~~~~~fl~l~L~~G~l~~~~~~g~~~~~v 159 (533)
.+.|.|+||++++.+.... .....|+|+|||.+++|+|||.+.. .....||++|+|.+|+|++.++.|++...+
T Consensus 7 ~~~F~G~syl~lp~~~~~~~~~~~~~~is~~frT~~~~GlLl~~~~~~~~~~~~~d~l~l~L~~G~l~~~~~~G~g~~~~ 86 (195)
T 3sh4_A 7 GAYFHDDGFLAFPGHVFSRSLPEVPETIELEVRTSTASGLLLWQGVEVGEAGQGKDFISLGLQDGHLVFRYQLGSGEARL 86 (195)
T ss_dssp EEEEEEEEEEEECGGGGCCCSTTCCEEEEEEEEECCSSEEEEEECCCTTCTTSTTCEEEEEEETTEEEEEEECSSCEEEE
T ss_pred cCEECCCEEEEEccccccccccccceEEEEEEEeCCCCcEEEEecccccCCCCCCcEEEEEEeCCEEEEEEECCCCcEEE
Confidence 4689999999999763321 2357999999999999999998742 112379999999999999999999888888
Q ss_pred EeeccccCCCcEEEEEEEECCEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEE
Q psy5025 160 RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLI 239 (533)
Q Consensus 160 ~s~~~lnDg~Wh~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~i 239 (533)
.+...++||+||+|.+.+.++.+.|.||+........++....++....+||||+|...... ......+|.|||+++++
T Consensus 87 ~s~~~l~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~-~~~~~~~F~GCi~~l~i 165 (195)
T 3sh4_A 87 VSEDPINDGEWHRVTALREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGGAPDVATLT-GGRFSSGITGCVKNLVL 165 (195)
T ss_dssp EEEEECCSSSCEEEEEEEETTEEEEEETTCCCEEEECCSSCCCCCCCSCEEESCCTTHHHHT-TTSCCCCCSEEEEEEEE
T ss_pred EcCceeCCCCeEEEEEEEeCCEEEEEECCeeeeeeeCCCCcccccCCCCEEECCCCCccccc-ccccccCCEEEEEEEEE
Confidence 88899999999999999999999999999876666666666667778899999998643221 12345789999999999
Q ss_pred C--------cEEcccccccccCCCccCCC
Q psy5025 240 N--------NHELNILGEAIQGVNVVNCA 260 (533)
Q Consensus 240 n--------~~~l~~~~~~~~~~~~~~C~ 260 (533)
| ++++++...+..+.++..||
T Consensus 166 n~~~~~~~~~~~ldl~~~a~~~~nv~~C~ 194 (195)
T 3sh4_A 166 HSARPGAPPPQPLDLQHRAQAGANTRPCP 194 (195)
T ss_dssp EECCTTCCCCCCCCTTTSCSEEEEEEECC
T ss_pred CCcCCCCCCceeecchhhhccCCccCCCC
Confidence 7 46677544466666776664
No 19
>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus}
Probab=99.93 E-value=3e-24 Score=198.67 Aligned_cols=167 Identities=26% Similarity=0.424 Sum_probs=134.1
Q ss_pred eeeeecCCCeeEEecCccccccccccceeeeeeeeeeecceeeEEEEEEEeCCCCeEEEEeccC--CCCCeEEEEEECCE
Q psy5025 297 MCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSS--QSKDFLALGIHNGY 374 (533)
Q Consensus 297 ~~~~f~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~rt~~~~g~ll~~~~~--~~~~~l~l~l~~g~ 374 (533)
..++| .+.||++|+..... .+.....++|+|+|||.+++|+|||.+.. ...+|++|+|.+|+
T Consensus 10 ~~~~F-~g~syl~~~~~~~~---------------~~~~~~~~~isl~frT~~~~GlLl~~~~~~~~~~d~l~l~L~~G~ 73 (189)
T 3pve_A 10 FLADF-NGFSYLELKGLHTF---------------ERDLGEKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHNRH 73 (189)
T ss_dssp CCEEE-ESSCEEEECCGGGC----------------------CEEEEEEEESSSCEEEEEEESCC-CCSCEEEEEEETTE
T ss_pred eeeEE-CCCceEEEcCcccc---------------cccccceEEEEEEEEeCCCCEEEEEecCCCCCCCCeEEEEEECCE
Confidence 34788 78999999976531 01113467999999999999999999752 34799999999999
Q ss_pred EEEEEEcCCceEEEeeCceeecCCCeEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceee
Q psy5025 375 AHVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSM 454 (533)
Q Consensus 375 l~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~ 454 (533)
+++.++.|++...+. +..+++||+||+|.+.| .++.+.|+||+....
T Consensus 74 l~~~~~~G~g~~~l~-s~~~l~Dg~WH~V~v~r--------------------------------~~~~~~L~VD~~~~~ 120 (189)
T 3pve_A 74 LEFRYDLGKGAAIIR-SKEPIALGTWVRVFLER--------------------------------NGRKGALQVGDGPRV 120 (189)
T ss_dssp EEEEEESSSCEEEEE-CSSCCCTTSEEEEEEEE--------------------------------ETTEEEEEETTSCCE
T ss_pred EEEEEecCCCCEEEE-cCcccCCCCEEEEEEEE--------------------------------eCCEEEEEECCceeE
Confidence 999999998877666 77899999999999999 899999999998776
Q ss_pred eEecCCcceeeccCCceEEcCCCCccccc-ccccccCceeeEEEEEEcCceEEeecccCc
Q psy5025 455 QSISGGKFEQLNTDSGLYVGGVEDIEELT-RSKYHHSFKGWISNLILSNDYQVKLPLSRS 513 (533)
Q Consensus 455 ~~~~~~~~~~l~~~~~l~lGg~~~~~~~~-~~~~~~~f~GCi~~l~i~~~~~l~~~~~~~ 513 (533)
....++....++.+..|||||+|...... ......+|+|||++|+| |+..++++..+.
T Consensus 121 ~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~GCi~~v~i-ng~~l~~~~~~~ 179 (189)
T 3pve_A 121 LGESPVPHTMLNLKEPLYVGGAPDFSKLARGAAVASGFDGAIQLVSL-RGHQLLTQEHVL 179 (189)
T ss_dssp EEECCSSCCCCCCCSCEEESCCSCGGGSCGGGCCCSBCEEEEEEEEE-TTEECCBGGGEE
T ss_pred eEEcCCCcceecCCCCEEECCcCchhhcccccccCCCCcEEceEEEE-CCEEccChhhcc
Confidence 66666666778888889999999865422 23466899999999999 789888877654
No 20
>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus}
Probab=99.92 E-value=8.3e-24 Score=195.02 Aligned_cols=159 Identities=28% Similarity=0.484 Sum_probs=127.0
Q ss_pred eeeeecCCCeeEEecCccccccccccceeeeeeeeeeecceeeEEEEEEEeCCCCeEEEEeccCCCCCeEEEEEECCEEE
Q psy5025 297 MCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAH 376 (533)
Q Consensus 297 ~~~~f~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~rt~~~~g~ll~~~~~~~~~~l~l~l~~g~l~ 376 (533)
..++| .+.+|+.|...... .....++|+|+|||.+++|+|||.+. ..+|++|+|.+|+|+
T Consensus 6 ~~~~F-~G~sy~~~~~~~~~-----------------~~~~~~~isl~frT~~~~GlLl~~g~--~~d~l~l~L~~G~l~ 65 (184)
T 2h0b_A 6 YIATF-KGSEYFCYDLSQNP-----------------IQSSSDEITLSFKTLQRNGLMLHTGK--SADYVNLALKNGAVS 65 (184)
T ss_dssp CEEEE-ESSEEEEEECSSSC-----------------EEESEEEEEEEEEESCSCEEEEEECC--TTEEEEEEEETTEEE
T ss_pred ceeEE-CCceEEEEccccCc-----------------cccCccEEEEEEEeCCCCEEEEEeCC--CCCEEEEEEECCEEE
Confidence 35678 78999999865321 12346799999999999999999853 379999999999999
Q ss_pred EEEEcCCceEEE--eeCceeecCCCeEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceee
Q psy5025 377 VMYNLGNGEVLL--ENNQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSM 454 (533)
Q Consensus 377 ~~~~~g~~~~~~--~~~~~~~~dg~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~ 454 (533)
+.++.|++.... ......++||+||+|.+.| .++.++|+||+....
T Consensus 66 ~~~~~G~g~~~~~~~~~~~~l~Dg~WH~V~v~r--------------------------------~~~~~~L~VD~~~~~ 113 (184)
T 2h0b_A 66 LVINLGSGAFEALVEPVNGKFNDNAWHDVKVTR--------------------------------NLRQVTISVDGILTT 113 (184)
T ss_dssp EEEEESSCEEEEEECCSSSCSSSSSCEEEEEEE--------------------------------ETTEEEEEETTTEEE
T ss_pred EEEECCCCeEEEEEecCCcccCCCCeEEEEEEE--------------------------------eCCEEEEEEcCceee
Confidence 999998875432 2356789999999999999 889999999998776
Q ss_pred eEecCCcceeeccCCceEEcCCCCcccccccccccCceeeEEEEEEcCceEEee
Q psy5025 455 QSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKL 508 (533)
Q Consensus 455 ~~~~~~~~~~l~~~~~l~lGg~~~~~~~~~~~~~~~f~GCi~~l~i~~~~~l~~ 508 (533)
....++....++.+..|||||+|.....+......+|+|||++|+| |+..+++
T Consensus 114 ~~~~~~~~~~l~~~~~l~lGG~p~~~~~~~~~~~~~F~GCi~~v~i-n~~~~~l 166 (184)
T 2h0b_A 114 TGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVY-KNNDVRL 166 (184)
T ss_dssp EEECSTTCCCEEECSEEEESCCTTGGGSTTCSCCCBCEEEEEEEEE-EESSCEE
T ss_pred eeECCCCceeccCCCCEEECCCCccccCcCCcccCCCEEEeeEEEE-CCEEcch
Confidence 6555655556777778999999987655555577899999999999 5555443
No 21
>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus}
Probab=99.91 E-value=1.4e-23 Score=192.91 Aligned_cols=153 Identities=25% Similarity=0.398 Sum_probs=127.7
Q ss_pred ccccCCceeEEEcCCcccccceeEEEEEEEecCCCeeEEEccccCCCCCCeEEEEEECCEEEEEEEcCCCceEEEeeccc
Q psy5025 86 VPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPI 165 (533)
Q Consensus 86 ~~~F~g~syl~~~~~~~~~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~~~v~s~~~l 165 (533)
.++|+|.||+.+..+.......+.|+|+|||.+++|+|||.+.. ...||++|+|.+|+|.+.++.|++...+.+...+
T Consensus 7 ~~~F~G~sy~~~~~~~~~~~~~~~isl~FrT~~~~GlLl~~~~~--~~~d~l~L~L~~G~l~~~~~~G~~~~~~~~~~~l 84 (182)
T 2r16_A 7 VLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSR--DSADTLRLELDAGRVKLTVNLGKGPETLFAGYNL 84 (182)
T ss_dssp EEEEESSCCEEEEEEEEEEESEEEEEEEEECSCSSEEEEEEECS--SSCCEEEEEEETTEEEEEEESSSCCEEEEECSSC
T ss_pred cEEECCCceEEEECCCcCCccceEEEEEEEECCCCEEEEEeCCC--CCCCEEEEEEECCEEEEEEECCCCceEEEcCccc
Confidence 67899999998764333334578999999999999999999763 2389999999999999999999888888888999
Q ss_pred cCCCcEEEEEEEECCEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEECcEEc
Q psy5025 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHEL 244 (533)
Q Consensus 166 nDg~Wh~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in~~~l 244 (533)
+||+||+|.+.+.++.+.|.||+........++....+++. .+|+||.|..... .....+|.|||+++++|+.++
T Consensus 85 nDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~-~l~iGG~~~~~~~---~~~~~~F~GCi~~l~in~~~~ 159 (182)
T 2r16_A 85 NDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFH-NIETGIITERRYL---SSVPSNFIGHLQSLTFNGMAY 159 (182)
T ss_dssp CSSSCEEEEEEEETTEEEEEETTCCEEEEECCSSCCCEEEE-EEEESSCCCCTTC---SSCCCCCEEEEEEEEETTEEH
T ss_pred CCCCeEEEEEEEECCEEEEEECCceeEeEECCCCccEEecc-CeEECCccccccc---CCCCCCCEEEEeEEEECCEEh
Confidence 99999999999999999999999876555666666667766 6999999874321 123468999999999999985
No 22
>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A*
Probab=99.91 E-value=1.7e-23 Score=190.06 Aligned_cols=137 Identities=15% Similarity=0.298 Sum_probs=110.1
Q ss_pred eeEEEEEEEeCCCCeEEEEeccCCCCCeEEEEEECCEEEEEEEcCCceEEEeeCceeecCCCeEEEEEEEeeeeeecCCc
Q psy5025 338 EFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVVMHGSS 417 (533)
Q Consensus 338 ~~~i~~~~rt~~~~g~ll~~~~~~~~~~l~l~l~~g~l~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~~~~~~~~ 417 (533)
.++|+|.|||.+++|+|||.+.....+|++|+|.+|+|++.++.|++...+. +..++|||+||+|.+.|
T Consensus 27 ~~~is~~FrT~~~~GlLly~~~~~~~df~~l~L~~G~l~~~~~~g~~~~~~~-s~~~vnDG~WH~V~v~~---------- 95 (170)
T 1d2s_A 27 KTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVG-AGPRLDDGRWHQVEVKM---------- 95 (170)
T ss_dssp CCEEEEEEEESCSSEEEEEEEEETTTEEEEEEEETTEEEEEEESSSCEEEEE-CSCCCCSSSCEEEEEEE----------
T ss_pred ceEEEEEEEeCCCCEEEEEecCCCCCCEEEEEEeCCEEEEEEECCCceEEEe-CCCccCCCCCEEEEEEE----------
Confidence 4689999999999999999976545799999999999999999988766653 67889999999999999
Q ss_pred ccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEecCCcceeeccCCceEEcCCCCcccccccccccCceeeEEE
Q psy5025 418 HTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISN 497 (533)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~lGg~~~~~~~~~~~~~~~f~GCi~~ 497 (533)
.++.+.|+||+........... ++. ..|||||+|........+...+|+|||++
T Consensus 96 ----------------------~~~~~~L~VD~~~~~~~~~~~~---l~~-~~lylGG~p~~~~~~~~~~~~~F~GCi~~ 149 (170)
T 1d2s_A 96 ----------------------EGDSVLLEVDGEEVLRLRQVSG---HPI-MRIALGGLLFPASNLRLPLVPALDGCLRR 149 (170)
T ss_dssp ----------------------ETTEEEEEETTEEEEEETTCCC---CCE-EEEEESSCSSCGGGSSSCCCCCCCEEEEE
T ss_pred ----------------------eCCEEEEEECCeeeeeeccCCC---ccc-ccEEEECcccchhhcccCCCCCeeeEeEE
Confidence 8899999999987665432222 333 57999999986543333567899999999
Q ss_pred EEEcCceEEeecccC
Q psy5025 498 LILSNDYQVKLPLSR 512 (533)
Q Consensus 498 l~i~~~~~l~~~~~~ 512 (533)
|+| ++..+++...+
T Consensus 150 l~i-n~~~~~l~~~~ 163 (170)
T 1d2s_A 150 DSW-LDKQAEISASA 163 (170)
T ss_dssp EEE-SCGGGEEEEEC
T ss_pred eEE-CCccceeeecc
Confidence 999 56666555444
No 23
>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus}
Probab=99.91 E-value=2.9e-23 Score=190.79 Aligned_cols=160 Identities=23% Similarity=0.395 Sum_probs=127.5
Q ss_pred eeeeeecCCCeeEEecCccccccccccceeeeeeeeeeecceeeEEEEEEEeCCCCeEEEEeccCCCCCeEEEEEECCEE
Q psy5025 296 VMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYA 375 (533)
Q Consensus 296 ~~~~~f~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~rt~~~~g~ll~~~~~~~~~~l~l~l~~g~l 375 (533)
...++| ++.||+.+..+... ....++|+|+|||.+++|+|||.+.....+|++|+|.+|+|
T Consensus 5 ~~~~~F-~G~sy~~~~~~~~~------------------~~~~~~isl~FrT~~~~GlLl~~~~~~~~d~l~L~L~~G~l 65 (182)
T 2r16_A 5 ATVLSY-DGSMFMKIQLPVVM------------------HTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRV 65 (182)
T ss_dssp CCEEEE-ESSCCEEEEEEEEE------------------EESEEEEEEEEECSCSSEEEEEEECSSSCCEEEEEEETTEE
T ss_pred cccEEE-CCCceEEEECCCcC------------------CccceEEEEEEEECCCCEEEEEeCCCCCCCEEEEEEECCEE
Confidence 345788 78899887543221 13467899999999999999998764557999999999999
Q ss_pred EEEEEcCCceEEEeeCceeecCCCeEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeee
Q psy5025 376 HVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQ 455 (533)
Q Consensus 376 ~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~ 455 (533)
++.++.|++...+. +...+|||+||+|.+.| .++.+.|+||+.....
T Consensus 66 ~~~~~~G~~~~~~~-~~~~lnDg~WH~V~v~r--------------------------------~~~~~~L~VD~~~~~~ 112 (182)
T 2r16_A 66 KLTVNLGKGPETLF-AGYNLNDNEWHTVRVVR--------------------------------RGKSLKLTVDDQQAMT 112 (182)
T ss_dssp EEEEESSSCCEEEE-ECSSCCSSSCEEEEEEE--------------------------------ETTEEEEEETTCCEEE
T ss_pred EEEEECCCCceEEE-cCcccCCCCeEEEEEEE--------------------------------ECCEEEEEECCceeEe
Confidence 99999998876665 67889999999999999 8899999999998776
Q ss_pred EecCCcceeeccCCceEEcCCCCcccccccccccCceeeEEEEEEcCceE-Eeeccc
Q psy5025 456 SISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ-VKLPLS 511 (533)
Q Consensus 456 ~~~~~~~~~l~~~~~l~lGg~~~~~~~~~~~~~~~f~GCi~~l~i~~~~~-l~~~~~ 511 (533)
...++....++.+ .+|+||+|..... .....+|.|||++|+| |+.+ +++...
T Consensus 113 ~~~~g~~~~l~~~-~l~iGG~~~~~~~--~~~~~~F~GCi~~l~i-n~~~~~~~~~~ 165 (182)
T 2r16_A 113 GQMAGDHTRLEFH-NIETGIITERRYL--SSVPSNFIGHLQSLTF-NGMAYIDLCKN 165 (182)
T ss_dssp EECCSSCCCEEEE-EEEESSCCCCTTC--SSCCCCCEEEEEEEEE-TTEEHHHHHHH
T ss_pred EECCCCccEEecc-CeEECCccccccc--CCCCCCCEEEEeEEEE-CCEEhHHHHhc
Confidence 6666666667766 5999999875321 2345789999999999 6666 455443
No 24
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=99.90 E-value=2.1e-23 Score=217.48 Aligned_cols=199 Identities=17% Similarity=0.282 Sum_probs=138.6
Q ss_pred CCCCCCC-CCCeeeecCCceEEecCCCCCcCcccceeeeeecCCCeeEEecCccccccccccceeeeeeeeeeecceeeE
Q psy5025 262 PCITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFN 340 (533)
Q Consensus 262 ~C~~~pC-ngg~C~~~~~~~~C~C~~g~~G~~c~~~~~~~f~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (533)
.|..++| +++.|+..... .|.+. ...+.+| .+.+|+.+..... ....++
T Consensus 15 ~~~~~~C~~~~~C~p~~~~---~~~~~-------~~~~~~F-~g~~~~~~~f~~~-------------------~~~~~~ 64 (422)
T 1h30_A 15 SQDMDTCEDILPCVPFSVA---KSVKS-------LYLGRMF-SGTPVIRLRFKRL-------------------QPTRLV 64 (422)
T ss_dssp ETTTTEEEECCCSSCBCCC---EETTE-------EECCC------CCEEEECCBS-------------------SCCCCE
T ss_pred ccccCcCCCCCccCCcccc---cCccc-------ceeeeEE-CCCceEEEEccCC-------------------CCCceE
Confidence 4677899 88999875532 22221 0124577 6677777654222 134578
Q ss_pred EEEEEEeCCCCeEEEEeccCCCCCeEEEEEECCEEEEEEEcCCceEEEeeCceeecCCCeEEEEEEEeeeeeecCCcccc
Q psy5025 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVVMHGSSHTR 420 (533)
Q Consensus 341 i~~~~rt~~~~g~ll~~~~~~~~~~l~l~l~~g~l~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~~~~~~~~~~~ 420 (533)
|+|+|||.+++|+|||.+.....+|++|+|.+|+|++.++.|++...+. ...+++||+||+|.+.|
T Consensus 65 is~~FrT~~~~GlLly~~~~~~~df~~l~L~~G~l~~~~~~g~~~~~~~-~~~~~nDg~WH~V~v~r------------- 130 (422)
T 1h30_A 65 AEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRVTS-SGPVINHGMWQTISVEE------------- 130 (422)
T ss_dssp EEEEEEECCSSEEEEEEESCTTSEEEEEEEETTEEEEEEEETTEEEEEE-EEEECCSSCCEEEEEEE-------------
T ss_pred EEEEEEeCCCCeEEEEECCCCCCcEEEEEEECCEEEEEEECCCCcEEEe-cCceecCCCCEEEEEEE-------------
Confidence 9999999999999999986555799999999999999999998765543 67899999999999999
Q ss_pred cCCcchhhhhhhhhccccccCcEEEEEECCceeeeEecCCcceeec---cCCceEEcCCCCcccccccccccCceeeEEE
Q psy5025 421 SNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLN---TDSGLYVGGVEDIEELTRSKYHHSFKGWISN 497 (533)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~~~~~~~l~---~~~~l~lGg~~~~~~~~~~~~~~~f~GCi~~ 497 (533)
.++.++|+||+........++....++ .+..|||||+|........+...+|+|||++
T Consensus 131 -------------------~~~~~~L~VD~~~~~~~~~~g~~~~l~~~~~~~~lyvGG~p~~~~~~~~~~~~~F~GCi~~ 191 (422)
T 1h30_A 131 -------------------LARNLVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRS 191 (422)
T ss_dssp -------------------CSSEEEEEETTEEEEEEECCSCSSEEETTEEECEEEESSCSSCGGGSSSCCCCCCCEEEEE
T ss_pred -------------------cCCEEEEEECCeeeEEeecCCcccccccccccceEEEecCcccccccccccCCCCeEEEEE
Confidence 999999999999877665666666665 4578999999987643223456789999999
Q ss_pred EEEcCceEEeecccCc--CCCCccccee
Q psy5025 498 LILSNDYQVKLPLSRS--QGSSCQLTCE 523 (533)
Q Consensus 498 l~i~~~~~l~~~~~~~--~~~~c~~~~~ 523 (533)
|+|+++..+++..... ...+|...++
T Consensus 192 v~i~~~~~~~l~~~~~~~~~~~C~~~~~ 219 (422)
T 1h30_A 192 WNWLNGEDTTIQETVKVNTRMQCFSVTE 219 (422)
T ss_dssp EEEC---------CCCCCGGGSEESSCB
T ss_pred eEECCccccchhhhhhcccCCCCCCcCC
Confidence 9996665556654332 3346765544
No 25
>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} PDB: 2vh8_C 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A*
Probab=99.90 E-value=5e-23 Score=188.48 Aligned_cols=158 Identities=22% Similarity=0.412 Sum_probs=123.5
Q ss_pred eeeeecCCCeeEEecCccccccccccceeeeeeeeeeecceeeEEEEEEEeCCCCeEEEEecc-CCCCCeEEEEEECCEE
Q psy5025 297 MCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGS-SQSKDFLALGIHNGYA 375 (533)
Q Consensus 297 ~~~~f~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~rt~~~~g~ll~~~~-~~~~~~l~l~l~~g~l 375 (533)
.+.+|..+.+|+.|...... +......+|+|.|||.+++|+|||..+ ....+|++|+|.+|+|
T Consensus 5 t~~~F~~~~s~l~y~~~~~~----------------~~~~~~~~isl~FrT~~~~GlLl~~~~~~~~~dfi~l~L~~G~l 68 (178)
T 3bod_A 5 STYIFSKGGGQITYKWPPND----------------RPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKI 68 (178)
T ss_dssp CEEEEEEEEEEEEEECCTTS----------------CCCBSEEEEEEEEECCCSSEEEEEEEESSSSCCEEEEEEETTEE
T ss_pred eEEEECCCCcEEEEECCCcC----------------CCCccccEEEEEEEECCCCEEEEEEcCCCCCCCEEEEEEECCEE
Confidence 35788656789888654310 112345789999999999999999642 2347999999999999
Q ss_pred EEEEEcCCceEEEeeCceeecCCCeEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeee
Q psy5025 376 HVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQ 455 (533)
Q Consensus 376 ~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~ 455 (533)
++.++.|++...+..+...++||+||+|.+.| .++.++|+||+.....
T Consensus 69 ~~~~~~G~~~~~~~~~~~~vnDg~WH~V~v~r--------------------------------~~~~~~L~VD~~~~~~ 116 (178)
T 3bod_A 69 GVKFNVGTDDIAIEESNAIINDGKYHVVRFTR--------------------------------SGGNATLQVDSWPVIE 116 (178)
T ss_dssp EEEEESSSCCEEEECCSSCCCSSSCEEEEEEE--------------------------------ETTEEEEEETTSCCEE
T ss_pred EEEEECCCCceEEecCCcCccCCCeEEEEEEE--------------------------------eCCEEEEEEeCCceee
Confidence 99999998877766566889999999999999 8899999999987655
Q ss_pred EecCC-cceeeccCCceEEcCCCCcccccccccccCceeeEEEEEEcCceE-EeecccC
Q psy5025 456 SISGG-KFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ-VKLPLSR 512 (533)
Q Consensus 456 ~~~~~-~~~~l~~~~~l~lGg~~~~~~~~~~~~~~~f~GCi~~l~i~~~~~-l~~~~~~ 512 (533)
...++ ....++.+..|||||+|. ..+|+|||++|+| |+.. +++....
T Consensus 117 ~~~~~~~~~~l~~~~~lylGG~p~---------~~~F~GCi~~v~i-n~~~vl~l~~~~ 165 (178)
T 3bod_A 117 RYPAGRQLTIFNSQATIIIGGKEQ---------GQPFQGQLSGLYY-NGLKVLNMAAEN 165 (178)
T ss_dssp ECCCSCCCCCBCCEEEEEESCCTT---------SCBCCEEEEEEEE-TTEEHHHHHHTT
T ss_pred eecCCCcceEEeCCCcEEEecccC---------CCCCEEEEEEEEE-CCEehHhHhhcC
Confidence 43333 234577777899999986 2689999999999 6665 7776554
No 26
>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A*
Probab=99.90 E-value=5.6e-23 Score=192.69 Aligned_cols=151 Identities=16% Similarity=0.315 Sum_probs=113.4
Q ss_pred eeEEEEEEEeCCCCeEEEEeccCCCCCeEEEEEECCEEEEEEEcCCceEEEeeCceeecCCCeEEEEEEEeeeeeecCCc
Q psy5025 338 EFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVVMHGSS 417 (533)
Q Consensus 338 ~~~i~~~~rt~~~~g~ll~~~~~~~~~~l~l~l~~g~l~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~~~~~~~~ 417 (533)
..+|+|.|||.+++|+|||.+.....+|++|+|.+|+|+++++.|++...+. +..++|||+||+|.+.|
T Consensus 39 ~~~is~~frT~~~~GlLly~~~~~~~d~~~l~L~~G~l~~~~~~g~~~~~~~-s~~~vnDG~WH~V~v~r---------- 107 (205)
T 1f5f_A 39 KTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVG-AGPRLDDGRWHQVEVKM---------- 107 (205)
T ss_dssp CCEEEEEEEESCSSEEEEEEEEETTTEEEEEEEETTEEEEEEESSSCEEEEE-CSCCCCSSSCEEEEEEE----------
T ss_pred ceEEEEEEEeCCCCEEEEEeCCCCCCCEEEEEEECCEEEEEEECCCceEEEe-cCCccCCCCCEEEEEEE----------
Confidence 3789999999999999999976544699999999999999999988776664 67889999999999999
Q ss_pred ccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEe-cCCc--ceeeccCCceEEcCCCCcccccccccccCceee
Q psy5025 418 HTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSI-SGGK--FEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGW 494 (533)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~-~~~~--~~~l~~~~~l~lGg~~~~~~~~~~~~~~~f~GC 494 (533)
.++.+.|+||+....... .... ...+. ...|||||+|........+...+|+||
T Consensus 108 ----------------------~~~~~~L~VD~~~~~~~~~~~~~~~~~~~~-~~~lyiGG~p~~~~~~~~~~~~~F~GC 164 (205)
T 1f5f_A 108 ----------------------EGDSVLLEVDGEEVLRLRQVSGPLTSKRHP-IMRIALGGLLFPASNLRLPLVPALDGC 164 (205)
T ss_dssp ----------------------ETTEEEEEETTEEEEEECSCCCCC----CC-EEEEEESSCSSCGGGSSSCCCCCCCEE
T ss_pred ----------------------eCCEEEEEECCeeeeeeeccCCCcccccCC-CceEEEeCccCccccccccCCCCeeEE
Confidence 889999999998766542 1111 11222 257999999976543334567899999
Q ss_pred EEEEEEcCceEEeecccC-cCCCCccccee
Q psy5025 495 ISNLILSNDYQVKLPLSR-SQGSSCQLTCE 523 (533)
Q Consensus 495 i~~l~i~~~~~l~~~~~~-~~~~~c~~~~~ 523 (533)
|++|+| ++..+++.... ....+|+...|
T Consensus 165 i~~l~i-~~~~~~l~~~~~~~v~~C~~~~e 193 (205)
T 1f5f_A 165 LRRDSW-LDKQAEISASAPTSLRSCDVESN 193 (205)
T ss_dssp EEEEEC-SCGGGEEEEECSSCCCBC-----
T ss_pred eeeeEE-CCeeccccccCcccCCCCCCcCC
Confidence 999999 45567776543 35567876544
No 27
>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A*
Probab=99.90 E-value=4.5e-23 Score=187.22 Aligned_cols=155 Identities=14% Similarity=0.242 Sum_probs=122.0
Q ss_pred cccCCce--eEEEcCCcccccceeEEEEEEEecCCCeeEEEccccCCCCCCeEEEEEECCEEEEEEEcCCCceEEEeecc
Q psy5025 87 PQFNGSS--YLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNP 164 (533)
Q Consensus 87 ~~F~g~s--yl~~~~~~~~~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~~~v~s~~~ 164 (533)
..|.|.+ |+.|+.+.. ...+|+|+|||.+++|+|||.+... ..||++|+|.+|+|++.++.|++...+.+...
T Consensus 8 ~~F~g~s~~~l~f~~~~~---~~~~is~~FrT~~~~GlLly~~~~~--~~df~~l~L~~G~l~~~~~~g~~~~~~~s~~~ 82 (170)
T 1d2s_A 8 NGPGQEPIAVMTFDLTKI---TKTSSSFEVRTWDPEGVIFYGDTNP--KDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPR 82 (170)
T ss_dssp CTTCCSCSEEEEEEGGGC---CCCEEEEEEEESCSSEEEEEEEEET--TTEEEEEEEETTEEEEEEESSSCEEEEECSCC
T ss_pred cCCCCCceEEEEecCCCC---CceEEEEEEEeCCCCEEEEEecCCC--CCCEEEEEEeCCEEEEEEECCCceEEEeCCCc
Confidence 4677766 577765443 3579999999999999999997642 27999999999999999999888777777889
Q ss_pred ccCCCcEEEEEEEECCEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEECcEEc
Q psy5025 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHEL 244 (533)
Q Consensus 165 lnDg~Wh~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in~~~l 244 (533)
+|||+||+|.+.+.++.+.|.||+.........+. +.. ..+||||+|...... ......+|.|||+++.+|+..+
T Consensus 83 vnDG~WH~V~v~~~~~~~~L~VD~~~~~~~~~~~~---l~~-~~lylGG~p~~~~~~-~~~~~~~F~GCi~~l~in~~~~ 157 (170)
T 1d2s_A 83 LDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSG---HPI-MRIALGGLLFPASNL-RLPLVPALDGCLRRDSWLDKQA 157 (170)
T ss_dssp CCSSSCEEEEEEEETTEEEEEETTEEEEEETTCCC---CCE-EEEEESSCSSCGGGS-SSCCCCCCCEEEEEEEESCGGG
T ss_pred cCCCCCEEEEEEEeCCEEEEEECCeeeeeeccCCC---ccc-ccEEEECcccchhhc-ccCCCCCeeeEeEEeEECCccc
Confidence 99999999999999999999999976443322222 223 579999999754321 2244688999999999999988
Q ss_pred ccccccc
Q psy5025 245 NILGEAI 251 (533)
Q Consensus 245 ~~~~~~~ 251 (533)
+++.++.
T Consensus 158 ~l~~~~~ 164 (170)
T 1d2s_A 158 EISASAP 164 (170)
T ss_dssp EEEEECS
T ss_pred eeeeccc
Confidence 7666555
No 28
>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus}
Probab=99.90 E-value=8e-23 Score=188.42 Aligned_cols=155 Identities=26% Similarity=0.519 Sum_probs=125.7
Q ss_pred ccccCCceeEEEcCCccc-ccceeEEEEEEEecCCCeeEEEccccCCCCCCeEEEEEECCEEEEEEEcCCCceE-E--Ee
Q psy5025 86 VPQFNGSSYLRYQGLGEQ-YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAAT-L--RS 161 (533)
Q Consensus 86 ~~~F~g~syl~~~~~~~~-~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~~~-v--~s 161 (533)
.+.|+|++|+.|+..... ....++|+|+|||.+++|+|||.+. ..||++|+|.+|+|.+.++.|++... + .+
T Consensus 7 ~~~F~G~sy~~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~g~----~~d~l~l~L~~G~l~~~~~~G~g~~~~~~~~~ 82 (184)
T 2h0b_A 7 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGK----SADYVNLALKNGAVSLVINLGSGAFEALVEPV 82 (184)
T ss_dssp EEEEESSEEEEEECSSSCEEESEEEEEEEEEESCSCEEEEEECC----TTEEEEEEEETTEEEEEEEESSCEEEEEECCS
T ss_pred eeEECCceEEEEccccCccccCccEEEEEEEeCCCCEEEEEeCC----CCCEEEEEEECCEEEEEEECCCCeEEEEEecC
Confidence 578999999999865422 2246899999999999999999854 27999999999999999999887643 2 24
Q ss_pred eccccCCCcEEEEEEEECCEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEECc
Q psy5025 162 SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINN 241 (533)
Q Consensus 162 ~~~lnDg~Wh~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in~ 241 (533)
...++||+||+|.+.+.++.+.|.||+........++....++....+||||.|.....+ ......+|.|||+++++|+
T Consensus 83 ~~~l~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~lGG~p~~~~~~-~~~~~~~F~GCi~~v~in~ 161 (184)
T 2h0b_A 83 NGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLP-GSPVSNNFMGCLKEVVYKN 161 (184)
T ss_dssp SSCSSSSSCEEEEEEEETTEEEEEETTTEEEEEECSTTCCCEEECSEEEESCCTTGGGST-TCSCCCBCEEEEEEEEEEE
T ss_pred CcccCCCCeEEEEEEEeCCEEEEEEcCceeeeeECCCCceeccCCCCEEECCCCccccCc-CCcccCCCEEEeeEEEECC
Confidence 578999999999999999999999999765555556555567777789999999864432 2345678999999999999
Q ss_pred EEcc
Q psy5025 242 HELN 245 (533)
Q Consensus 242 ~~l~ 245 (533)
..++
T Consensus 162 ~~~~ 165 (184)
T 2h0b_A 162 NDVR 165 (184)
T ss_dssp SSCE
T ss_pred EEcc
Confidence 8764
No 29
>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} PDB: 3mw2_A* 3b3q_E* 3mw3_A*
Probab=99.88 E-value=2.5e-22 Score=189.85 Aligned_cols=157 Identities=22% Similarity=0.396 Sum_probs=117.4
Q ss_pred eeeecCCCeeEEecCccccccccccceeeeeeeeeeecceeeEEEEEEEeCCCCeEEEEeccCC-CCCeEEEEEECCEEE
Q psy5025 298 CASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQ-SKDFLALGIHNGYAH 376 (533)
Q Consensus 298 ~~~f~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~rt~~~~g~ll~~~~~~-~~~~l~l~l~~g~l~ 376 (533)
.++|..+.||+.|...... +......+|+|.|||.+++|+|||.+... ..+|++|+|.+|+|+
T Consensus 12 ~~~F~~g~s~l~y~~~~~~----------------~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~dfi~LeL~~G~l~ 75 (220)
T 2r1b_A 12 TYIFSKGGGQITYKWPPND----------------RPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIG 75 (220)
T ss_dssp EEEEEEEEEEEEEECCGGG----------------CCCBSEEEEEEEEECCCSSEEEEEEEESTTCCCEEEEEEETTEEE
T ss_pred eEEECCCCeEEEEECCCCC----------------cccccCcEEEEEEEeCCCCEEEEEecCCCCCCCeEEEEEECCEEE
Confidence 4688666799988654311 11233468999999999999999965432 479999999999999
Q ss_pred EEEEcCCceEEEeeCceeecCCCeEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeE
Q psy5025 377 VMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQS 456 (533)
Q Consensus 377 ~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~ 456 (533)
+.++.|++...+......++||+||+|.+.| .++.++|+||+......
T Consensus 76 ~~~~~G~~~~~~~~~~~~vnDG~WH~V~v~r--------------------------------~~~~~~L~VD~~~~~~~ 123 (220)
T 2r1b_A 76 VKFNVGTDDIAIEESNAIINDGKYHVVRFTR--------------------------------SGGNATLQVDSWPVIER 123 (220)
T ss_dssp EEEESSSSCEEEECTTCCCCSSSCEEEEEEE--------------------------------ETTEEEEEETTSCCEEE
T ss_pred EEEECCCCceEEEeCceEecCCceEEEEEEE--------------------------------eCCEEEEEECCcceeee
Confidence 9999999887777555789999999999999 88999999999865443
Q ss_pred ecCCcce--e-----------------------------eccCCceEEcCCCCcccccccccccCceeeEEEEEEcCceE
Q psy5025 457 ISGGKFE--Q-----------------------------LNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ 505 (533)
Q Consensus 457 ~~~~~~~--~-----------------------------l~~~~~l~lGg~~~~~~~~~~~~~~~f~GCi~~l~i~~~~~ 505 (533)
...+... . ++....|||||+|. ..+|+|||++|+||+...
T Consensus 124 ~~~g~~~~~~l~~~~~~ip~~~~~~~~~~~~~~~~~~~~~n~~~~l~lGG~p~---------~~~F~GCi~~l~ing~~v 194 (220)
T 2r1b_A 124 YPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQATIIIGGKEQ---------GQPFQGQLSGLYYNGLKV 194 (220)
T ss_dssp CC-----------------CHHHHHHHHHHHHHHHGGGSBCCEEEEEESSTTT---------TCCCCEEEEEEEETTBCH
T ss_pred ccCCCccchheeccccccccccccccccccccccccceEecCCCcEEECCccC---------CCCCEEEEeEEEECCChH
Confidence 2222111 1 22356799999982 468999999999944344
Q ss_pred Eeeccc
Q psy5025 506 VKLPLS 511 (533)
Q Consensus 506 l~~~~~ 511 (533)
+++...
T Consensus 195 l~la~~ 200 (220)
T 2r1b_A 195 LNMAAE 200 (220)
T ss_dssp HHHHHT
T ss_pred HhHhhc
Confidence 577655
No 30
>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} PDB: 2vh8_C 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A*
Probab=99.88 E-value=8.6e-22 Score=180.27 Aligned_cols=149 Identities=25% Similarity=0.448 Sum_probs=119.8
Q ss_pred ccccC-CceeEEEcCCcc--cccceeEEEEEEEecCCCeeEEEccccCCCCCCeEEEEEECCEEEEEEEcCCCceEEE-e
Q psy5025 86 VPQFN-GSSYLRYQGLGE--QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR-S 161 (533)
Q Consensus 86 ~~~F~-g~syl~~~~~~~--~~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~~~v~-s 161 (533)
+..|. +.+|+.|..... .......|+|+|||.+++|+|||.+.. .+..||++|+|.+|+|.+.++.|++...+. +
T Consensus 6 ~~~F~~~~s~l~y~~~~~~~~~~~~~~isl~FrT~~~~GlLl~~~~~-~~~~dfi~l~L~~G~l~~~~~~G~~~~~~~~~ 84 (178)
T 3bod_A 6 TYIFSKGGGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSS-SGLGDYLELHIHQGKIGVKFNVGTDDIAIEES 84 (178)
T ss_dssp EEEEEEEEEEEEEECCTTSCCCBSEEEEEEEEECCCSSEEEEEEEES-SSSCCEEEEEEETTEEEEEEESSSCCEEEECC
T ss_pred EEEECCCCcEEEEECCCcCCCCccccEEEEEEEECCCCEEEEEEcCC-CCCCCEEEEEEECCEEEEEEECCCCceEEecC
Confidence 46786 569998875441 223467999999999999999996532 234899999999999999999998877776 4
Q ss_pred eccccCCCcEEEEEEEECCEEEEEEcCccCceeeCCCC-ceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEEC
Q psy5025 162 SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGP-FTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240 (533)
Q Consensus 162 ~~~lnDg~Wh~V~v~~~~~~~~L~VD~~~~~~~~~~~~-~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in 240 (533)
...++||+||+|.+.+.++.+.|.||+........++. ...++....+||||+|. ..+|.|||+++++|
T Consensus 85 ~~~vnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~p~----------~~~F~GCi~~v~in 154 (178)
T 3bod_A 85 NAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQ----------GQPFQGQLSGLYYN 154 (178)
T ss_dssp SSCCCSSSCEEEEEEEETTEEEEEETTSCCEEECCCSCCCCCBCCEEEEEESCCTT----------SCBCCEEEEEEEET
T ss_pred CcCccCCCeEEEEEEEeCCEEEEEEeCCceeeeecCCCcceEEeCCCcEEEecccC----------CCCCEEEEEEEEEC
Confidence 57899999999999999999999999976554433332 24466667899999986 27899999999999
Q ss_pred cEE-cc
Q psy5025 241 NHE-LN 245 (533)
Q Consensus 241 ~~~-l~ 245 (533)
+.. ++
T Consensus 155 ~~~vl~ 160 (178)
T 3bod_A 155 GLKVLN 160 (178)
T ss_dssp TEEHHH
T ss_pred CEehHh
Confidence 998 55
No 31
>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A*
Probab=99.88 E-value=1.2e-21 Score=183.65 Aligned_cols=149 Identities=15% Similarity=0.285 Sum_probs=115.3
Q ss_pred eeEEEcCCcccccceeEEEEEEEecCCCeeEEEccccCCCCCCeEEEEEECCEEEEEEEcCCCceEEEeeccccCCCcEE
Q psy5025 93 SYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHK 172 (533)
Q Consensus 93 syl~~~~~~~~~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~~~v~s~~~lnDg~Wh~ 172 (533)
+|+.++.... ...+|+|+|||.+++|+|||.+... ..||++|+|.+|+|++.++.+++...+.+...+|||+||+
T Consensus 28 ~y~~~~~~~~---~~~~is~~frT~~~~GlLly~~~~~--~~d~~~l~L~~G~l~~~~~~g~~~~~~~s~~~vnDG~WH~ 102 (205)
T 1f5f_A 28 AVMTFDLTKI---TKTSSSFEVRTWDPEGVIFYGDTNP--KDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQ 102 (205)
T ss_dssp EEEEEEGGGC---CCCEEEEEEEESCSSEEEEEEEEET--TTEEEEEEEETTEEEEEEESSSCEEEEECSCCCCSSSCEE
T ss_pred EEEEECCCCC---CceEEEEEEEeCCCCEEEEEeCCCC--CCCEEEEEEECCEEEEEEECCCceEEEecCCccCCCCCEE
Confidence 6677764332 2479999999999999999998643 2699999999999999999988877777788999999999
Q ss_pred EEEEEECCEEEEEEcCccCceee-CCCC--ceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEECcEEccccc
Q psy5025 173 LRLTRTGRHAYLQVDRFPSSQIL-SPGP--FTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILG 248 (533)
Q Consensus 173 V~v~~~~~~~~L~VD~~~~~~~~-~~~~--~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in~~~l~~~~ 248 (533)
|.+.+.++.+.|.||+....... ...+ ...+ ....+||||+|...... ......+|.|||+++.+++..+++.+
T Consensus 103 V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~~~~-~~~~lyiGG~p~~~~~~-~~~~~~~F~GCi~~l~i~~~~~~l~~ 179 (205)
T 1f5f_A 103 VEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRH-PIMRIALGGLLFPASNL-RLPLVPALDGCLRRDSWLDKQAEISA 179 (205)
T ss_dssp EEEEEETTEEEEEETTEEEEEECSCCCCC----C-CEEEEEESSCSSCGGGS-SSCCCCCCCEEEEEEECSCGGGEEEE
T ss_pred EEEEEeCCEEEEEECCeeeeeeeccCCCcccccC-CCceEEEeCccCccccc-cccCCCCeeEEeeeeEECCeeccccc
Confidence 99999999999999997644332 1111 1222 22679999999754221 23456889999999999998888543
No 32
>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} PDB: 3mw2_A* 3b3q_E* 3mw3_A*
Probab=99.87 E-value=1.3e-21 Score=184.96 Aligned_cols=148 Identities=24% Similarity=0.431 Sum_probs=113.9
Q ss_pred ccccC-CceeEEEcCCcc--cccceeEEEEEEEecCCCeeEEEccccCCCCCCeEEEEEECCEEEEEEEcCCCceEEEee
Q psy5025 86 VPQFN-GSSYLRYQGLGE--QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162 (533)
Q Consensus 86 ~~~F~-g~syl~~~~~~~--~~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~~~v~s~ 162 (533)
+..|. +.+|+.|..... .......|+|+|||.+++|+|||.+.. .+..||++|+|.+|+|++.++.|++...+...
T Consensus 12 ~~~F~~g~s~l~y~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~-~~~~dfi~LeL~~G~l~~~~~~G~~~~~~~~~ 90 (220)
T 2r1b_A 12 TYIFSKGGGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSS-SGLGDYLELHIHQGKIGVKFNVGTDDIAIEES 90 (220)
T ss_dssp EEEEEEEEEEEEEECCGGGCCCBSEEEEEEEEECCCSSEEEEEEEES-TTCCCEEEEEEETTEEEEEEESSSSCEEEECT
T ss_pred eEEECCCCeEEEEECCCCCcccccCcEEEEEEEeCCCCEEEEEecCC-CCCCCeEEEEEECCEEEEEEECCCCceEEEeC
Confidence 46785 569998875441 222356899999999999999996543 12479999999999999999999888877765
Q ss_pred -ccccCCCcEEEEEEEECCEEEEEEcCccCceeeCCCCce--ee-----------------------------ecCCCEE
Q psy5025 163 -NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFT--QL-----------------------------SLSLSLY 210 (533)
Q Consensus 163 -~~lnDg~Wh~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~--~l-----------------------------~~~~~l~ 210 (533)
..++||+||+|.+.|.++.+.|.||+........++... .+ +....+|
T Consensus 91 ~~~vnDG~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~~~l~~~~~~ip~~~~~~~~~~~~~~~~~~~~~n~~~~l~ 170 (220)
T 2r1b_A 91 NAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQATII 170 (220)
T ss_dssp TCCCCSSSCEEEEEEEETTEEEEEETTSCCEEECC-----------------CHHHHHHHHHHHHHHHGGGSBCCEEEEE
T ss_pred ceEecCCceEEEEEEEeCCEEEEEECCcceeeeccCCCccchheeccccccccccccccccccccccccceEecCCCcEE
Confidence 579999999999999999999999998654432222111 11 1145799
Q ss_pred EcCcCCCCccCCCcccccCceeeeeeEEECcEEc
Q psy5025 211 LGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHEL 244 (533)
Q Consensus 211 vGG~p~~~~~~~~~~~~~~F~GCI~~l~in~~~l 244 (533)
|||+|. ..+|.|||+++.+|+..+
T Consensus 171 lGG~p~----------~~~F~GCi~~l~ing~~v 194 (220)
T 2r1b_A 171 IGGKEQ----------GQPFQGQLSGLYYNGLKV 194 (220)
T ss_dssp ESSTTT----------TCCCCEEEEEEEETTBCH
T ss_pred ECCccC----------CCCCEEEEeEEEECCChH
Confidence 999982 378999999999999864
No 33
>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E*
Probab=99.87 E-value=1.2e-21 Score=185.69 Aligned_cols=133 Identities=22% Similarity=0.411 Sum_probs=108.5
Q ss_pred eeeEEEEEEEeCCCCeEEEEeccC-CCCCeEEEEEECCEEEEEEEcCCceEEEeeCceeecCCCeEEEEEEEeeeeeecC
Q psy5025 337 YEFNIDMRIKTSSSSGLILWTGSS-QSKDFLALGIHNGYAHVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVVMHG 415 (533)
Q Consensus 337 ~~~~i~~~~rt~~~~g~ll~~~~~-~~~~~l~l~l~~g~l~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~~~~~~ 415 (533)
...+|+|.|||.+++|+|||.++. ...+|++|+|.+|+|++.+++|++...+.....+++||+||.|.+.|
T Consensus 63 ~~~~isl~FrT~~~~GlLl~~~~~~~~~dfi~L~L~~G~l~~~~~~G~~~~~~~~~~~~vnDG~WH~V~v~r-------- 134 (226)
T 2r1d_A 63 RADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRFTR-------- 134 (226)
T ss_dssp SEEEEEEEEECCCSSEEEEEEEECTTCCCEEEEEEETTEEEEEEESSSCEEEEECCSSCCCSSSCEEEEEEE--------
T ss_pred cccEEEEEEEeCCCCEEEEEecCCCCCCCEEEEEEECCEEEEEEECCCCcEEEEeCCeEecCCCCEEEEEEE--------
Confidence 346899999999999999997543 24799999999999999999999887777556789999999999999
Q ss_pred CcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeE-ecCCcceeeccCCceEEcCCCCcccccccccccCceee
Q psy5025 416 SSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQS-ISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGW 494 (533)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~-~~~~~~~~l~~~~~l~lGg~~~~~~~~~~~~~~~f~GC 494 (533)
.++.+.|+||+...... ..++....++.+..|||||+|.. .+|+||
T Consensus 135 ------------------------~~~~~~L~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~p~~---------~~F~GC 181 (226)
T 2r1d_A 135 ------------------------SGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQG---------QPFQGQ 181 (226)
T ss_dssp ------------------------ETTEEEEEETTSCCEEECCSSCCCCCBCSEEEEEESSTTTT---------CCCCEE
T ss_pred ------------------------eCCEEEEEEcCccceEEecCCCcceeccCCCeEEEccccCC---------CCCeEE
Confidence 89999999999864432 33444566777778999999862 689999
Q ss_pred EEEEEEcCceEEeecc
Q psy5025 495 ISNLILSNDYQVKLPL 510 (533)
Q Consensus 495 i~~l~i~~~~~l~~~~ 510 (533)
|++|+||+...+++..
T Consensus 182 i~~v~ing~~vl~la~ 197 (226)
T 2r1d_A 182 LSGLYYNGLKVLNMAA 197 (226)
T ss_dssp EEEEEETTBCHHHHHH
T ss_pred EeeEEECCEeHHhhhh
Confidence 9999995444456544
No 34
>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E*
Probab=99.87 E-value=1.5e-21 Score=185.04 Aligned_cols=159 Identities=21% Similarity=0.333 Sum_probs=120.5
Q ss_pred CCCCccccccccccccCCceeEEEcCCcc--cccceeEEEEEEEecCCCeeEEEccccCCCCCCeEEEEEECCEEEEEEE
Q psy5025 74 TGDLCQTRLDLQVPQFNGSSYLRYQGLGE--QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151 (533)
Q Consensus 74 ~G~~Ce~~~~~~~~~F~g~syl~~~~~~~--~~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~ 151 (533)
.|..|+..-..-...|++ +|+.|..... .......|+|+|||.+++|+|||.+.. .+..||++|+|.+|+|.+.++
T Consensus 30 ~g~r~~~~gc~y~f~~~g-s~i~y~~~~~~~~~~~~~~isl~FrT~~~~GlLl~~~~~-~~~~dfi~L~L~~G~l~~~~~ 107 (226)
T 2r1d_A 30 ASLRGGHAGTTYIFSKGG-GQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSS-SGLGDYLELHIHQGKIGVKFN 107 (226)
T ss_dssp -----CCCSSEEEEEEEE-EEEEEECCGGGCCCBSEEEEEEEEECCCSSEEEEEEEEC-TTCCCEEEEEEETTEEEEEEE
T ss_pred cccCcccCCeEEEEecCC-cEEEEECCccccccccccEEEEEEEeCCCCEEEEEecCC-CCCCCEEEEEEECCEEEEEEE
Confidence 355555421111467788 9999875542 122356899999999999999997643 124899999999999999999
Q ss_pred cCCCceEEEee-ccccCCCcEEEEEEEECCEEEEEEcCccCce-eeCCCCceeeecCCCEEEcCcCCCCccCCCcccccC
Q psy5025 152 LGTGAATLRSS-NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQ-ILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSS 229 (533)
Q Consensus 152 ~g~~~~~v~s~-~~lnDg~Wh~V~v~~~~~~~~L~VD~~~~~~-~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~ 229 (533)
.|++...+... ..++||+||+|.+.|.++.+.|.||+..... ...++....++....+||||+|.. .+
T Consensus 108 ~G~~~~~~~~~~~~vnDG~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~p~~----------~~ 177 (226)
T 2r1d_A 108 VGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQG----------QP 177 (226)
T ss_dssp SSSCEEEEECCSSCCCSSSCEEEEEEEETTEEEEEETTSCCEEECCSSCCCCCBCSEEEEEESSTTTT----------CC
T ss_pred CCCCcEEEEeCCeEecCCCCEEEEEEEeCCEEEEEEcCccceEEecCCCcceeccCCCeEEEccccCC----------CC
Confidence 99888777764 6799999999999999999999999975433 233444556666678999999851 78
Q ss_pred ceeeeeeEEECcEEc
Q psy5025 230 FIGCIQKVLINNHEL 244 (533)
Q Consensus 230 F~GCI~~l~in~~~l 244 (533)
|.|||+++.+|+..+
T Consensus 178 F~GCi~~v~ing~~v 192 (226)
T 2r1d_A 178 FQGQLSGLYYNGLKV 192 (226)
T ss_dssp CCEEEEEEEETTBCH
T ss_pred CeEEEeeEEECCEeH
Confidence 999999999999864
No 35
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=99.28 E-value=1.3e-12 Score=93.03 Aligned_cols=44 Identities=39% Similarity=0.808 Sum_probs=37.1
Q ss_pred cCCCC--CCCCCCCCCCCCCee-----eeCCCCceecCCCCCCCCCccccc
Q psy5025 39 SKECL--EDKCNKTPCEHGGKC-----ITTPGSSYCLCPLGFTGDLCQTRL 82 (533)
Q Consensus 39 ~~~C~--~d~C~~~pC~NggtC-----~~~~~~y~C~C~~g~~G~~Ce~~~ 82 (533)
|++|+ +|+|.++||+|||+| ++..++|+|.|++||+|++||..+
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v 51 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYV 51 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEEC
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccC
Confidence 35676 799999999999999 567799999999999999999986
No 36
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.98 E-value=3e-10 Score=75.48 Aligned_cols=37 Identities=41% Similarity=1.039 Sum_probs=35.0
Q ss_pred CCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCccc
Q psy5025 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQT 80 (533)
Q Consensus 44 ~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~ 80 (533)
+|+|.++||+|||+|++..++|+|.|++||+|++||.
T Consensus 3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp CCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred cccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccCC
Confidence 5889999999999999999999999999999999984
No 37
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.85 E-value=1.1e-09 Score=112.96 Aligned_cols=122 Identities=10% Similarity=0.095 Sum_probs=73.4
Q ss_pred CC-CCCeeeecCCceEEecCCCCCcCccccee----eeeecCCCeeEEecCccccccccccceeeeeeeeeeecceeeEE
Q psy5025 267 PC-GSGSCVPLYDGYKCVCTQSCKESHLTEVM----CASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNI 341 (533)
Q Consensus 267 pC-ngg~C~~~~~~~~C~C~~g~~G~~c~~~~----~~~f~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 341 (533)
|| |+|+|.... .|.|++||.|..|+... ...|....+|..+.....- . .-++. .. ....++
T Consensus 294 ~C~ngg~C~~~~---~C~C~~G~~G~~Ce~~~~~~~~~~~~~~~~~~~c~~g~~g---~----~C~~~--~~--~~~~~~ 359 (423)
T 2gy5_A 294 SCNNGEMCDRFQ---GCLCSPGWQGLQCEREGIPRMTPKIVDLPDHIEVNSGKFN---P----ICKAS--GW--PLPTNE 359 (423)
T ss_dssp CCTTCCEEETTT---EEECCTTCBSTTSCBCSSCCCCCEECSCCSBCCEESEEEC---C----EEEEE--CT--TCCCGG
T ss_pred cCCCCCEecCCC---ceECCCCCcCCCCccCccCCcCcceecCCCeEEeCCCccC---C----ccccc--CC--cCCCCc
Confidence 79 999998653 39999999999998752 2233233444433321100 0 00000 00 001122
Q ss_pred EEEEEeCCCCeEEEEeccCCCCCeEEEEEECCEEEEEEEcCCceEEEeeCceeecCCCeEEEEEE
Q psy5025 342 DMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYNLGNGEVLLENNQTKINNGVWHRLTVH 406 (533)
Q Consensus 342 ~~~~rt~~~~g~ll~~~~~~~~~~l~l~l~~g~l~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~ 406 (533)
++.+ .+++|++|+.......+|++|+|.+|++.+.+++|+....+......+. +++.|.|.
T Consensus 360 ~~~~--~~~~G~cl~~~~~~~~d~ial~l~~G~v~~syd~G~~~~~v~t~~~~~e--~~~~i~Vk 420 (423)
T 2gy5_A 360 EMTL--VKPDGTVLHPKDFNHTDHFSVAIFTIHRILPPDSGVWVCSVNTVAGMVE--KPFNISVK 420 (423)
T ss_dssp GEEE--ECTTSCEECCSEEEECSSCEEEECCEEEECGGGCEEEEEEEEETTEEEE--EEEEECEE
T ss_pred eEEE--ECCCeEEEeCCCcCcccceeeeEEeeeEEEeecCCCcceEEEecCcEEe--cCceEEee
Confidence 2233 4779999998654458999999999999999998877666654443333 34555443
No 38
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=98.83 E-value=8.9e-10 Score=81.58 Aligned_cols=45 Identities=33% Similarity=0.751 Sum_probs=38.8
Q ss_pred CCCCCCCCCCCCeeee-----CCCCceecCCCCCCCCCcccccccccccc
Q psy5025 45 DKCNKTPCEHGGKCIT-----TPGSSYCLCPLGFTGDLCQTRLDLQVPQF 89 (533)
Q Consensus 45 d~C~~~pC~NggtC~~-----~~~~y~C~C~~g~~G~~Ce~~~~~~~~~F 89 (533)
+.|.++||+|||+|++ ..++|+|.|++||+|++|+.+++.+...|
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~~~~~ 56 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQ 56 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSCTTC
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCcccccc
Confidence 5788999999999997 56899999999999999998877654443
No 39
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.81 E-value=2.1e-09 Score=73.68 Aligned_cols=38 Identities=34% Similarity=0.681 Sum_probs=33.8
Q ss_pred CCCCCC---CCCCCCeee--eCCCCceecCCCCCCCCCccccc
Q psy5025 45 DKCNKT---PCEHGGKCI--TTPGSSYCLCPLGFTGDLCQTRL 82 (533)
Q Consensus 45 d~C~~~---pC~NggtC~--~~~~~y~C~C~~g~~G~~Ce~~~ 82 (533)
++|.++ ||+|||+|+ +..++|+|.|++||+|++||..+
T Consensus 1 ~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 43 (45)
T 1a3p_A 1 PGXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRD 43 (45)
T ss_dssp CCCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTCEEC
T ss_pred CCcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCCccc
Confidence 367777 999999998 67799999999999999999864
No 40
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.79 E-value=3.5e-09 Score=75.30 Aligned_cols=39 Identities=38% Similarity=0.840 Sum_probs=35.4
Q ss_pred CCCCCCC---CCCCCCeee--eCCCCceecCCCCCCCCCccccc
Q psy5025 44 EDKCNKT---PCEHGGKCI--TTPGSSYCLCPLGFTGDLCQTRL 82 (533)
Q Consensus 44 ~d~C~~~---pC~NggtC~--~~~~~y~C~C~~g~~G~~Ce~~~ 82 (533)
+++|.++ ||+|||+|+ +..++|.|.|+.||+|.+||..+
T Consensus 3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 46 (53)
T 1egf_A 3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRD 46 (53)
T ss_dssp ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCS
T ss_pred cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccC
Confidence 4788887 999999999 78899999999999999999864
No 41
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.79 E-value=9e-10 Score=80.13 Aligned_cols=43 Identities=21% Similarity=0.454 Sum_probs=37.9
Q ss_pred cCCCC-CCCCCCCCCCCC--CeeeeCCCCceecCCCCCC-CCCcccc
Q psy5025 39 SKECL-EDKCNKTPCEHG--GKCITTPGSSYCLCPLGFT-GDLCQTR 81 (533)
Q Consensus 39 ~~~C~-~d~C~~~pC~Ng--gtC~~~~~~y~C~C~~g~~-G~~Ce~~ 81 (533)
...|. +|+|.++||+|| |+|++..++|+|.|++||+ |.+|+..
T Consensus 5 ~~~~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~~ 51 (61)
T 2k2s_B 5 VQLSETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTGN 51 (61)
T ss_dssp --CTTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSSC
T ss_pred hhhcCCCCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCCCC
Confidence 44566 789999999999 8999999999999999999 9999865
No 42
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.77 E-value=3.4e-09 Score=75.36 Aligned_cols=41 Identities=22% Similarity=0.439 Sum_probs=33.9
Q ss_pred CCCCCCCC-CCCee-----eecCCceEEecCCCCCcCcccceeeeee
Q psy5025 261 HPCITQPC-GSGSC-----VPLYDGYKCVCTQSCKESHLTEVMCASF 301 (533)
Q Consensus 261 ~~C~~~pC-ngg~C-----~~~~~~~~C~C~~g~~G~~c~~~~~~~f 301 (533)
++|.++|| |||+| ++..++|+|.|++||.|.+|+....++|
T Consensus 9 ~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~~sF 55 (55)
T 3u7u_G 9 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVMASF 55 (55)
T ss_dssp CSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECCCC-
T ss_pred CCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCccCC
Confidence 68999999 99999 4667899999999999999997665554
No 43
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=98.63 E-value=9.2e-09 Score=70.50 Aligned_cols=37 Identities=38% Similarity=0.890 Sum_probs=32.8
Q ss_pred CCCCCC---CCCCCCCeeeeCC--CCceecCCCCCCCCCcccc
Q psy5025 44 EDKCNK---TPCEHGGKCITTP--GSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 44 ~d~C~~---~pC~NggtC~~~~--~~y~C~C~~g~~G~~Ce~~ 81 (533)
++.|.+ +||+| |+|++.. ++|.|.|++||+|++||..
T Consensus 3 i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred cccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 467888 99999 7999865 7899999999999999975
No 44
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.60 E-value=2.1e-08 Score=80.09 Aligned_cols=48 Identities=31% Similarity=0.803 Sum_probs=42.5
Q ss_pred ceeecCCCC---CCCCCCCCCCCCCeeeeCC--CCceecCCCCCCCCCcccccc
Q psy5025 35 IKGRSKECL---EDKCNKTPCEHGGKCITTP--GSSYCLCPLGFTGDLCQTRLD 83 (533)
Q Consensus 35 ~~G~~~~C~---~d~C~~~pC~NggtC~~~~--~~y~C~C~~g~~G~~Ce~~~~ 83 (533)
..||. .|+ ++.|.++||+|||+|++.. ++|+|.|++||+|++||.+++
T Consensus 37 ~~G~~-~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~id 89 (91)
T 1tpg_A 37 NSGRA-QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTR 89 (91)
T ss_dssp SSSCC-BCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCBCSS
T ss_pred CCCCc-ccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCCCCcCCcCCcCCC
Confidence 55665 786 5889999999999999987 999999999999999998765
No 45
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A
Probab=98.57 E-value=1.4e-06 Score=81.43 Aligned_cols=144 Identities=14% Similarity=0.138 Sum_probs=91.9
Q ss_pred ceeeEEEEEEEeCC-CCeEEEEeccCCCCCeEEEEEE-C--CEEEEEEEcCCce-EEEeeCceeecCCCeEEEEEEEeee
Q psy5025 336 GYEFNIDMRIKTSS-SSGLILWTGSSQSKDFLALGIH-N--GYAHVMYNLGNGE-VLLENNQTKINNGVWHRLTVHRNFM 410 (533)
Q Consensus 336 ~~~~~i~~~~rt~~-~~g~ll~~~~~~~~~~l~l~l~-~--g~l~~~~~~g~~~-~~~~~~~~~~~dg~wH~v~~~~~~~ 410 (533)
...++|.+++|+.. ..+.||........+.|.|... + |...+.+..++.. .... ....+.||+||+|.+.++.
T Consensus 31 l~~fTvc~wv~~~~~~~~~lfSy~~~~~~n~l~l~~~~~~~g~~~~~l~i~g~~~~~~~-~~~~~~~g~W~Hv~~t~d~- 108 (217)
T 3flp_A 31 VRQLTVCQRIKPFHRNTGYIFSCATSNQDNQFITSMYVKSDGTLNLGLQVNASSNKYIS-CPIEIELGQWYHVCHVWSG- 108 (217)
T ss_dssp BSEEEEEEEEEESCSSCEEEEEEEETTEEEEEEEEEEECTTSEEEEEEEETTCCCEEEE-EEEECCTTSCEEEEEEEET-
T ss_pred CccEEEEEEEEecCCCCeeEEEEECCCCCceEEEEEeCCCCcceEEEEEECCccceeEE-cccccCCCCEEEEEEEEEC-
Confidence 35689999999554 4567776544433456667665 3 3344444443332 2232 3467999999999999921
Q ss_pred eeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEecCCcceeeccCCceEEcCCCCcccccccccccC
Q psy5025 411 VVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHS 490 (533)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~lGg~~~~~~~~~~~~~~~ 490 (533)
....+.|+|||..............+...+.+.||.-..... -.......
T Consensus 109 -----------------------------~~G~~~lYvdG~~~~~~~~~~~g~~i~~~g~l~lG~~~~~~g-g~f~~~~~ 158 (217)
T 3flp_A 109 -----------------------------VDGRMAVYANGSPCGTMENVGKGHQISAGGTVVIGQEQDKIG-GGFEEQES 158 (217)
T ss_dssp -----------------------------TTTEEEEEETTEEEEEESCSSTTCCBCSCBEEEESSCCSBTT-BCCCGGGC
T ss_pred -----------------------------CCCEEEEEECCEEecceeccccCcEECCCCEEEeCCcccCCC-CccCCCCc
Confidence 346899999999876533222223455567788987544211 01113468
Q ss_pred ceeeEEEEEEcCceEEeecccC
Q psy5025 491 FKGWISNLILSNDYQVKLPLSR 512 (533)
Q Consensus 491 f~GCi~~l~i~~~~~l~~~~~~ 512 (533)
|.|-|.+++| .++.|...+..
T Consensus 159 f~G~i~~v~i-w~~aLs~~eI~ 179 (217)
T 3flp_A 159 WSGELSDLQV-WDEALTTHQVS 179 (217)
T ss_dssp CCEEEEEEEE-ESSCCCHHHHH
T ss_pred eEEEEeeEEE-ECccCCHHHHH
Confidence 9999999999 78877766544
No 46
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.52 E-value=8.2e-08 Score=63.48 Aligned_cols=34 Identities=26% Similarity=0.721 Sum_probs=31.9
Q ss_pred CCCCCCCC-CCCeeeecCCceEEecCCCCCcCccc
Q psy5025 261 HPCITQPC-GSGSCVPLYDGYKCVCTQSCKESHLT 294 (533)
Q Consensus 261 ~~C~~~pC-ngg~C~~~~~~~~C~C~~g~~G~~c~ 294 (533)
++|.++|| |+|+|++...+|.|.|++||.|..|+
T Consensus 4 d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 4 DQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred ccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 57889999 99999999999999999999999886
No 47
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=98.48 E-value=3.4e-08 Score=69.87 Aligned_cols=34 Identities=32% Similarity=0.740 Sum_probs=31.0
Q ss_pred CCCCCCCCeee--eCCCCceecCCCCCCCCCccccc
Q psy5025 49 KTPCEHGGKCI--TTPGSSYCLCPLGFTGDLCQTRL 82 (533)
Q Consensus 49 ~~pC~NggtC~--~~~~~y~C~C~~g~~G~~Ce~~~ 82 (533)
++||+|||+|+ +..++|.|.|++||+|++||..+
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~~ 46 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRD 46 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEEC
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcCC
Confidence 68999999998 66789999999999999999863
No 48
>2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A
Probab=98.47 E-value=4.3e-06 Score=77.57 Aligned_cols=123 Identities=11% Similarity=0.179 Sum_probs=88.3
Q ss_pred eeeEEEEEEEeC-CCCeEEEEeccCCC-CCeEEEEEE--CCEEEEEEEcCCceEEEeeCceeecCCCeEEEEEEEeeeee
Q psy5025 337 YEFNIDMRIKTS-SSSGLILWTGSSQS-KDFLALGIH--NGYAHVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVV 412 (533)
Q Consensus 337 ~~~~i~~~~rt~-~~~g~ll~~~~~~~-~~~l~l~l~--~g~l~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~~~ 412 (533)
.++.|.+.||.. ...|.||...+... ..+|.|.+. ...+.+.|...+....+.+....+.||+||+|.+..
T Consensus 62 ~eFsi~~t~r~~~~~~~~LfsI~~~~~~~~ql~l~l~g~~~~l~~~y~~~g~~~~~~f~~v~l~dg~WH~l~l~V----- 136 (209)
T 2erf_A 62 KGFLLLASLRQMKKTRGTLLALERKDHSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSVEEALLATGQWKSITLFV----- 136 (209)
T ss_dssp TEEEEEEEEEECTTCEEEEEEEEETTSSCEEEEEEEETTTTEEEEEEEETTEEEEEEESSCCCCSSSEEEEEEEE-----
T ss_pred CCEEEEEEEEcCCCCCceEEEEEcCCCCEEEEEEEEcCCCCEEEEEEcCCCCEEEEEEeccccCCCcEEEEEEEE-----
Confidence 678899999966 45677887766554 567777775 347888886655555555566779999999999999
Q ss_pred ecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEecCCcceee-cc----CCceEEcCCCCccccccccc
Q psy5025 413 MHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQL-NT----DSGLYVGGVEDIEELTRSKY 487 (533)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~~~~~~~l-~~----~~~l~lGg~~~~~~~~~~~~ 487 (533)
.+..++|+||-..............+ .. .+.++||-....
T Consensus 137 ---------------------------~~~~v~L~vDC~~~~~~~l~~~~~~~~~~~~~~~~~~~iGq~~~~-------- 181 (209)
T 2erf_A 137 ---------------------------QEDRAQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVN-------- 181 (209)
T ss_dssp ---------------------------ETTEEEEEETTTEEEEEECSSCGGGTCCTTHHHHEEEEESCCTTT--------
T ss_pred ---------------------------ECCEEEEEEcCeEeEeEEccCCchhccccccCCceEEEEecCCCC--------
Confidence 89999999999987765443322222 11 346889854321
Q ss_pred ccCceeeEEEEEE
Q psy5025 488 HHSFKGWISNLIL 500 (533)
Q Consensus 488 ~~~f~GCi~~l~i 500 (533)
.. |+|=|++|+|
T Consensus 182 ~~-F~G~lq~l~i 193 (209)
T 2erf_A 182 DN-FQGVLQNVRF 193 (209)
T ss_dssp CB-CCEEEEEEEE
T ss_pred CC-CeEEeEEEEE
Confidence 23 9999999998
No 49
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A*
Probab=98.47 E-value=7.3e-06 Score=75.67 Aligned_cols=140 Identities=12% Similarity=0.003 Sum_probs=91.0
Q ss_pred ceeeEEEEEEEeCC-CCeEEEEeccCCCCCeEEEEE-ECCEEEEEEEcCCceEEEeeCceeecCCCeEEEEEEEeeeeee
Q psy5025 336 GYEFNIDMRIKTSS-SSGLILWTGSSQSKDFLALGI-HNGYAHVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVVM 413 (533)
Q Consensus 336 ~~~~~i~~~~rt~~-~~g~ll~~~~~~~~~~l~l~l-~~g~l~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~~~~ 413 (533)
...+++.++++|.. ..+.||..+.....+-|.|.. .+|.+.+.+ ++....+. ..+.||+||+|.+.++.
T Consensus 30 l~~fTvc~wv~~~~~~~~tlfSy~~~~~~nel~l~~~~~~~~~l~i--~g~~~~~~---~~~~~g~W~Hv~~twd~---- 100 (204)
T 3kqr_A 30 LQNFTLCFRAYSDLSRAYSLFSYNTQGRDNELLVYKERVGEYSLYI--GRHKVTSK---VIEKFPAPVHICVSWES---- 100 (204)
T ss_dssp BSEEEEEEEEECCCCSCEEEEEEEETTEEEEEEEEEEETTEEEEEE--TTEEEEEE---CCCCSSCCEEEEEEEET----
T ss_pred cCCEEEEEEEEeCCCCCeEEEEEECCCCCceEEEEEcCCCeEEEEE--CCeEEEEe---cccCCCceEEEEEEEEC----
Confidence 35689999999875 467777655443334555555 357766665 33333332 57899999999999921
Q ss_pred cCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEecCCcceeeccCCceEEcCCCCcccccccccccCcee
Q psy5025 414 HGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKG 493 (533)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~lGg~~~~~~~~~~~~~~~f~G 493 (533)
....+.|+|||........ .....++..+.+.||.-.+... -.......|.|
T Consensus 101 --------------------------~~G~~~lyvdG~~~~~~~~-~~g~~i~~~g~l~lGq~qd~~g-g~f~~~~~f~G 152 (204)
T 3kqr_A 101 --------------------------SSGIAEFWINGTPLVKKGL-RQGYFVEAQPKIVLGQEQDSYG-GKFDRSQSFVG 152 (204)
T ss_dssp --------------------------TTCEEEEEETTEECCCEEC-CTTCCBCSSCEEEESSCCSSSS-CCCCGGGCCCE
T ss_pred --------------------------CCCeEEEEECCEEeeeecc-CCCCEECCCcEEEEcccccCCC-CCcCcccceeE
Confidence 3568999999987654222 2222355556788886544311 01123468999
Q ss_pred eEEEEEEcCceEEeecccCc
Q psy5025 494 WISNLILSNDYQVKLPLSRS 513 (533)
Q Consensus 494 Ci~~l~i~~~~~l~~~~~~~ 513 (533)
-|.+++| +++.|...+...
T Consensus 153 ~i~~v~i-W~~aLs~~eI~~ 171 (204)
T 3kqr_A 153 EIGDLYM-WDSVLPPENILS 171 (204)
T ss_dssp EEEEEEE-ESSCCCHHHHHH
T ss_pred EEeeEEE-ECccCCHHHHHH
Confidence 9999999 888887665443
No 50
>1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A
Probab=98.45 E-value=4.1e-06 Score=79.84 Aligned_cols=123 Identities=11% Similarity=0.183 Sum_probs=86.3
Q ss_pred eeeEEEEEEEeCC-CCeEEEEeccCCC-CCeEEEEEEC--CEEEEEEEcCCceEEEeeCceeecCCCeEEEEEEEeeeee
Q psy5025 337 YEFNIDMRIKTSS-SSGLILWTGSSQS-KDFLALGIHN--GYAHVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVV 412 (533)
Q Consensus 337 ~~~~i~~~~rt~~-~~g~ll~~~~~~~-~~~l~l~l~~--g~l~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~~~ 412 (533)
.+|.|.+.||... ..|.||...+... ..+|.|.+.. ..|.+.|...++...+.+....+.||+||+|.+..
T Consensus 72 ~eFsil~tlr~~~~~~g~LfsI~~~~g~~~ql~l~~~G~~~~l~~~Y~~~g~~~~~~f~~~~L~Dg~WH~lalsV----- 146 (251)
T 1za4_A 72 KGFLLLASLRQMKKTRGTLLALERKDHSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSVEEALLATGQWKSITLFV----- 146 (251)
T ss_dssp TEEEEEEEEEECTTCEEEEEEEEETTSSCEEEEEEEETTTTEEEEEEEETTEEEEEEESSCCCCSSSCEEEEEEE-----
T ss_pred CcEEEEEEEEecCCCCeEEEEEEeCCCCEEEEEEEECCCCcEEEEEEEcCCCeeeEEEecccccCCCEEEEEEEE-----
Confidence 5788999999765 5568887765543 3466555432 37888887655555455566789999999999999
Q ss_pred ecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEecCCcceee-----ccCCceEEcCCCCccccccccc
Q psy5025 413 MHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQL-----NTDSGLYVGGVEDIEELTRSKY 487 (533)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~~~~~~~l-----~~~~~l~lGg~~~~~~~~~~~~ 487 (533)
.+..++|+||-..............+ ...+.++||-....
T Consensus 147 ---------------------------~~~~VtLyvDC~~~~~~~l~~~~~~i~~~~~~~~~~~~iGq~~~~-------- 191 (251)
T 1za4_A 147 ---------------------------QEDRAQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVN-------- 191 (251)
T ss_dssp ---------------------------ETTEEEEEETTSCCEEEECSSCGGGTSCTTGGGTEEEEESCCSTT--------
T ss_pred ---------------------------ECCEEEEEECCcccceeeccCccccccccccCCCcEEEEEecCCC--------
Confidence 99999999999987665443322222 12456889854321
Q ss_pred ccCceeeEEEEEE
Q psy5025 488 HHSFKGWISNLIL 500 (533)
Q Consensus 488 ~~~f~GCi~~l~i 500 (533)
.. |+|=|.+|+|
T Consensus 192 ~~-F~G~lq~l~i 203 (251)
T 1za4_A 192 DN-FQGVLQNVRF 203 (251)
T ss_dssp CB-CCEEEEEEEE
T ss_pred CC-CeEEeEEEEE
Confidence 23 9999999999
No 51
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A
Probab=98.44 E-value=9.9e-06 Score=74.98 Aligned_cols=140 Identities=11% Similarity=0.030 Sum_probs=91.5
Q ss_pred ceeeEEEEEEEeCC---CCeEEEEeccCCCCCeEEEEEE-CCEEEEEEEcCCceEEEeeCceeecCCCeEEEEEEEeeee
Q psy5025 336 GYEFNIDMRIKTSS---SSGLILWTGSSQSKDFLALGIH-NGYAHVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMV 411 (533)
Q Consensus 336 ~~~~~i~~~~rt~~---~~g~ll~~~~~~~~~~l~l~l~-~g~l~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~~ 411 (533)
...+++.++++|.. ..+.||........+-|.|... +|.+.+.+ ++....+. ..+.||+||+|.+.++.
T Consensus 30 l~~fTvc~wv~~~~~~~~~~~lfSy~~~~~~n~l~l~~~~~g~~~l~i--~g~~~~~~---~~~~~g~W~Hv~~twd~-- 102 (206)
T 3pvn_A 30 LKAFTVCLHFYTELSSTRGYSIFSYATKRQDNEILIFWSKDIGYSFTV--GGSEILFE---VPEVTVAPVHICTSWES-- 102 (206)
T ss_dssp BSEEEEEEEEEESGGGTCCEEEEEEEETTEEEEEEEEEETTTEEEEEE--TTEEEEEE---CSSCCSSCEEEEEEEET--
T ss_pred cCCEEEEEEEEecCCCCCcEEEEEEEcCCCCCEEEEEEcCCCeEEEEE--CCeEEEEe---ccCCCCceEEEEEEEEC--
Confidence 35689999999985 4677876654433445666664 57766655 33333332 56899999999999921
Q ss_pred eecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEecCCcceeeccCCceEEcCCCCcccccccccccCc
Q psy5025 412 VMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSF 491 (533)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~lGg~~~~~~~~~~~~~~~f 491 (533)
....+.|+|||........ .....+...+.+.||.-.+... -.......|
T Consensus 103 ----------------------------~~G~~~lyvdG~~~~~~~~-~~g~~i~~~g~l~lGq~qd~~g-g~f~~~~~f 152 (206)
T 3pvn_A 103 ----------------------------ASGIVEFWVDGKPRVRKSL-KKGYTVGAEASIILGQEQDSFG-GNFEGSQSL 152 (206)
T ss_dssp ----------------------------TTCEEEEEETTEECCCEEC-CTTCCBCSSCEEEESSCCSBTT-BCCCGGGCC
T ss_pred ----------------------------CCCeEEEEECCEEcccccc-cCCcEECCCCEEEEccccccCC-CCcCCccce
Confidence 3468999999987654222 2222345566788886543211 011234689
Q ss_pred eeeEEEEEEcCceEEeecccCc
Q psy5025 492 KGWISNLILSNDYQVKLPLSRS 513 (533)
Q Consensus 492 ~GCi~~l~i~~~~~l~~~~~~~ 513 (533)
.|-|.+++| +++.|...+...
T Consensus 153 ~G~i~~v~i-w~~aLs~~eI~~ 173 (206)
T 3pvn_A 153 VGDIGNVNM-WDFVLSPDEINT 173 (206)
T ss_dssp CEEEEEEEE-ESSCCCHHHHHH
T ss_pred EEEEeeEEE-ECccCCHHHHHH
Confidence 999999999 888777655443
No 52
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=98.41 E-value=1.3e-05 Score=71.80 Aligned_cols=134 Identities=12% Similarity=0.112 Sum_probs=94.1
Q ss_pred ceeeEEEEEEEeCCCCe--EEEEeccC-CCCCeEEEEEECCEEEEEEEcCCce--EEE-eeCceeecCCCeEEEEEEEee
Q psy5025 336 GYEFNIDMRIKTSSSSG--LILWTGSS-QSKDFLALGIHNGYAHVMYNLGNGE--VLL-ENNQTKINNGVWHRLTVHRNF 409 (533)
Q Consensus 336 ~~~~~i~~~~rt~~~~g--~ll~~~~~-~~~~~l~l~l~~g~l~~~~~~g~~~--~~~-~~~~~~~~dg~wH~v~~~~~~ 409 (533)
..+.+|.|+||+.+ ++ -||.+.+. ....||.|+|.+|.+.+.++...+. ... ...... .+++||.|++..
T Consensus 39 L~~gTI~v~fks~~-~~~q~LfSIsN~k~~n~yf~lyi~~g~lg~e~R~~~~~~~~~~~~~a~v~-~~~~wntvaf~~-- 114 (191)
T 2v73_A 39 LEEGTIVTRFNMND-TSIQSLIGLSDGNKANNYFSLYVSGGKVGYELRRQEGNGDFNVHHSADVT-FNRGINTLALKI-- 114 (191)
T ss_dssp CSSEEEEEEEEECC-CSCEEEEEEECTTCSSCEEEEEECSSEEEEEEEECTTSSCEEEEEEEECC-CCSSCEEEEEEE--
T ss_pred cCCcEEEEEEecCC-CcceEEEEccCCCCccceEEEEEeCCEEEEEEecCCCceeeeeeccccee-cCCceEEEEEEE--
Confidence 35688999999998 43 45555433 2479999999999999998874432 121 212233 445999999999
Q ss_pred eeeecCCcccccCCcchhhhhhhhhccccccC-cEEEEEECCceeeeEecC--CcceeeccCCceEEcCCCCcccccccc
Q psy5025 410 MVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTG-KQCLIRIDTDYSMQSISG--GKFEQLNTDSGLYVGGVEDIEELTRSK 486 (533)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~vD~~~~~~~~~~--~~~~~l~~~~~l~lGg~~~~~~~~~~~ 486 (533)
++ ..+.|++||..+.+...+ .....++. ..+.|||..... ..
T Consensus 115 ------------------------------d~~~~~~ly~NG~~V~t~~~~~~~fi~~i~l-n~~~IG~~~r~s----g~ 159 (191)
T 2v73_A 115 ------------------------------EKGIGAKIFLNGSLVKTVSDPNIKFLNAINL-NSGFIGKTDRAN----GY 159 (191)
T ss_dssp ------------------------------ETTTEEEEEETTEEEEEEECTTCCCGGGSCC-CEEEESSCCCCS----SS
T ss_pred ------------------------------cCCccEEEEECCEEEEEEecccccceeecCC-ceEEEcceeecC----Cc
Confidence 54 699999999998887543 23344433 459999988752 23
Q ss_pred cccCceeeEEEEEEcCceEEeec
Q psy5025 487 YHHSFKGWISNLILSNDYQVKLP 509 (533)
Q Consensus 487 ~~~~f~GCi~~l~i~~~~~l~~~ 509 (533)
....|.|=|++++| -+++|.-.
T Consensus 160 ~~y~F~G~Id~~~i-Yn~aLs~e 181 (191)
T 2v73_A 160 NEYLFRGNIDFMNI-YDKPVSDN 181 (191)
T ss_dssp CCCCCCEEEEEEEE-ESSCCCHH
T ss_pred eeeccCCeEEEEEE-EcCcCCHH
Confidence 55689999999999 66666443
No 53
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.33 E-value=1.8e-08 Score=95.58 Aligned_cols=47 Identities=15% Similarity=0.143 Sum_probs=40.2
Q ss_pred cCCCC-CCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCcccccccc
Q psy5025 39 SKECL-EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQ 85 (533)
Q Consensus 39 ~~~C~-~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~~~~~ 85 (533)
+..|+ .++|.++||+|||+|++...+|+|.||.||+|.+|+.+++.+
T Consensus 93 G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C 140 (267)
T 4fbr_A 93 GARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSV 140 (267)
T ss_dssp CCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEE
T ss_pred cCccccccccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCCcccc
Confidence 34454 346888999999999999999999999999999999987754
No 54
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=98.31 E-value=1.2e-07 Score=66.93 Aligned_cols=33 Identities=24% Similarity=0.648 Sum_probs=29.4
Q ss_pred CCCCCCCCeeee----CCCCceecCCCCCCCCCcccc
Q psy5025 49 KTPCEHGGKCIT----TPGSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 49 ~~pC~NggtC~~----~~~~y~C~C~~g~~G~~Ce~~ 81 (533)
++||+|||+|++ ..++|.|.|+.||+|++||..
T Consensus 13 ~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 13 AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (52)
T ss_dssp HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCEE
T ss_pred CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCccc
Confidence 569999999997 357899999999999999975
No 55
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A
Probab=98.30 E-value=1.9e-05 Score=73.76 Aligned_cols=151 Identities=11% Similarity=0.158 Sum_probs=94.2
Q ss_pred CceeEEEcCC-cccccceeEEEEEEEecC-CCeeEEEccccCCCCCCeEEEEEE-CCE--EEEEEEcCCC-ceEEEeecc
Q psy5025 91 GSSYLRYQGL-GEQYLSLLDLTIVFKAIE-PNGILLYNGHRADGVGDFIALYLN-DRY--VDFTFDLGTG-AATLRSSNP 164 (533)
Q Consensus 91 g~syl~~~~~-~~~~~~~~~ls~~FrT~~-~dGlLl~~~~~~~~~~~fl~l~L~-~G~--l~~~~~~g~~-~~~v~s~~~ 164 (533)
..+|+.+.+. ..+....+++.+++++.. ..+.||-.+... ..+-+.|... ++. ..+.+..++. ...+..+..
T Consensus 16 ~~~yv~l~~~~~~p~l~~fTvc~wv~~~~~~~~~lfSy~~~~--~~n~l~l~~~~~~~g~~~~~l~i~g~~~~~~~~~~~ 93 (217)
T 3flp_A 16 NPKFPHLRFMQTLPAVRQLTVCQRIKPFHRNTGYIFSCATSN--QDNQFITSMYVKSDGTLNLGLQVNASSNKYISCPIE 93 (217)
T ss_dssp TTBCCEEEESSCBCCBSEEEEEEEEEESCSSCEEEEEEEETT--EEEEEEEEEEECTTSEEEEEEEETTCCCEEEEEEEE
T ss_pred CCCEEEEecCCCCCCCccEEEEEEEEecCCCCeeEEEEECCC--CCceEEEEEeCCCCcceEEEEEECCccceeEEcccc
Confidence 3689988753 333456799999999544 455666443321 1345556554 333 3344443322 234556678
Q ss_pred ccCCCcEEEEEEEEC--CEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEECcE
Q psy5025 165 ISLGEWHKLRLTRTG--RHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNH 242 (533)
Q Consensus 165 lnDg~Wh~V~v~~~~--~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in~~ 242 (533)
+.+|+||+|.+++++ +.+.|+|||..............+.....+.||....... ..+.....|.|-|.+++|.++
T Consensus 94 ~~~g~W~Hv~~t~d~~~G~~~lYvdG~~~~~~~~~~~g~~i~~~g~l~lG~~~~~~g--g~f~~~~~f~G~i~~v~iw~~ 171 (217)
T 3flp_A 94 IELGQWYHVCHVWSGVDGRMAVYANGSPCGTMENVGKGHQISAGGTVVIGQEQDKIG--GGFEEQESWSGELSDLQVWDE 171 (217)
T ss_dssp CCTTSCEEEEEEEETTTTEEEEEETTEEEEEESCSSTTCCBCSCBEEEESSCCSBTT--BCCCGGGCCCEEEEEEEEESS
T ss_pred cCCCCEEEEEEEEECCCCEEEEEECCEEecceeccccCcEECCCCEEEeCCcccCCC--CccCCCCceEEEEeeEEEECc
Confidence 999999999999996 5789999997654322221122233345688887543211 122245789999999999998
Q ss_pred Ecc
Q psy5025 243 ELN 245 (533)
Q Consensus 243 ~l~ 245 (533)
.++
T Consensus 172 aLs 174 (217)
T 3flp_A 172 ALT 174 (217)
T ss_dssp CCC
T ss_pred cCC
Confidence 876
No 56
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.26 E-value=1.6e-07 Score=96.63 Aligned_cols=121 Identities=17% Similarity=0.321 Sum_probs=74.8
Q ss_pred ceee-cCCCCC--------CCCC-CCCCCCCCeeeeCCCCceecCCCCCCCCCccccccc-ccccc-CCceeEEEcCC--
Q psy5025 35 IKGR-SKECLE--------DKCN-KTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDL-QVPQF-NGSSYLRYQGL-- 100 (533)
Q Consensus 35 ~~G~-~~~C~~--------d~C~-~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~~~~-~~~~F-~g~syl~~~~~-- 100 (533)
..|| +..|+. +.|. ..+|.|+|+|.+.. .|.|++||+|++||..... ..+.| ...+++.+..-
T Consensus 268 ~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~---~C~C~~G~~G~~Ce~~~~~~~~~~~~~~~~~~~c~~g~~ 344 (423)
T 2gy5_A 268 ATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQ---GCLCSPGWQGLQCEREGIPRMTPKIVDLPDHIEVNSGKF 344 (423)
T ss_dssp CBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTT---EEECCTTCBSTTSCBCSSCCCCCEECSCCSBCCEESEEE
T ss_pred CCCcccccccCccCCCCcCCcccccccCCCCCEecCCC---ceECCCCCcCCCCccCccCCcCcceecCCCeEEeCCCcc
Confidence 4566 555552 2343 23899999998764 4999999999999986321 11222 12333332210
Q ss_pred c----cc-ccceeEEEEEEEecCCCeeEEEccccCCCCCCeEEEEEECCEEEEEEEcCCCceEEEee
Q psy5025 101 G----EQ-YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162 (533)
Q Consensus 101 ~----~~-~~~~~~ls~~FrT~~~dGlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~~~v~s~ 162 (533)
. .. ......+++.| .+++|+++|.+.... .+|++|+|.+|++.+.+++|.....+++.
T Consensus 345 g~~C~~~~~~~~~~~~~~~--~~~~G~cl~~~~~~~--~d~ial~l~~G~v~~syd~G~~~~~v~t~ 407 (423)
T 2gy5_A 345 NPICKASGWPLPTNEEMTL--VKPDGTVLHPKDFNH--TDHFSVAIFTIHRILPPDSGVWVCSVNTV 407 (423)
T ss_dssp CCEEEEECTTCCCGGGEEE--ECTTSCEECCSEEEE--CSSCEEEECCEEEECGGGCEEEEEEEEET
T ss_pred CCcccccCCcCCCCceEEE--ECCCeEEEeCCCcCc--ccceeeeEEeeeEEEeecCCCcceEEEec
Confidence 0 00 00011122233 578999999876433 89999999999999999887665555433
No 57
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.25 E-value=6.2e-07 Score=77.28 Aligned_cols=51 Identities=25% Similarity=0.734 Sum_probs=35.0
Q ss_pred ceee-cCCCC--CCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCcccccccc
Q psy5025 35 IKGR-SKECL--EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQ 85 (533)
Q Consensus 35 ~~G~-~~~C~--~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~~~~~ 85 (533)
..|| +..|+ +++|..+||+|+++|++..++|.|.|++||+|..|+.+++.+
T Consensus 33 ~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C 86 (135)
T 2vj3_A 33 LQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDEC 86 (135)
T ss_dssp CTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEECCTT
T ss_pred CCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceecCCcc
Confidence 5566 66665 566777777777777777777777777777777777655444
No 58
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A
Probab=98.24 E-value=5e-05 Score=70.19 Aligned_cols=151 Identities=15% Similarity=0.086 Sum_probs=96.5
Q ss_pred ccccCC---ceeEEEcCCcccccceeEEEEEEEecC---CCeeEEEccccCCCCCCeEEEEEE-CCEEEEEEEcCCCceE
Q psy5025 86 VPQFNG---SSYLRYQGLGEQYLSLLDLTIVFKAIE---PNGILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGAAT 158 (533)
Q Consensus 86 ~~~F~g---~syl~~~~~~~~~~~~~~ls~~FrT~~---~dGlLl~~~~~~~~~~~fl~l~L~-~G~l~~~~~~g~~~~~ 158 (533)
...|.+ .+|+.+.+.-......+++.+++++.. .++.||-.+... ..+-+.|... +|.+.+.+ ++. .
T Consensus 8 ~l~Fp~~s~~~yv~l~~~~~~~l~~fTvc~wv~~~~~~~~~~~lfSy~~~~--~~n~l~l~~~~~g~~~l~i--~g~--~ 81 (206)
T 3pvn_A 8 AFVFPKESDTSYVSLKAPLTKPLKAFTVCLHFYTELSSTRGYSIFSYATKR--QDNEILIFWSKDIGYSFTV--GGS--E 81 (206)
T ss_dssp EEEECSCCSSCEEEECCCCCSCBSEEEEEEEEEESGGGTCCEEEEEEEETT--EEEEEEEEEETTTEEEEEE--TTE--E
T ss_pred EEEcCCCCCCCEEEEecCCCCCcCCEEEEEEEEecCCCCCcEEEEEEEcCC--CCCEEEEEEcCCCeEEEEE--CCe--E
Confidence 345554 589999864433356899999999875 466666544432 1334555554 56766665 222 2
Q ss_pred EEeeccccCCCcEEEEEEEEC--CEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCccCCCcccccCceeeeee
Q psy5025 159 LRSSNPISLGEWHKLRLTRTG--RHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQK 236 (533)
Q Consensus 159 v~s~~~lnDg~Wh~V~v~~~~--~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~ 236 (533)
.....++++|+||+|.+++++ +.+.|+|||......... ....+.....+.||...... ...+.....|.|-|.+
T Consensus 82 ~~~~~~~~~g~W~Hv~~twd~~~G~~~lyvdG~~~~~~~~~-~g~~i~~~g~l~lGq~qd~~--gg~f~~~~~f~G~i~~ 158 (206)
T 3pvn_A 82 ILFEVPEVTVAPVHICTSWESASGIVEFWVDGKPRVRKSLK-KGYTVGAEASIILGQEQDSF--GGNFEGSQSLVGDIGN 158 (206)
T ss_dssp EEEECSSCCSSCEEEEEEEETTTCEEEEEETTEECCCEECC-TTCCBCSSCEEEESSCCSBT--TBCCCGGGCCCEEEEE
T ss_pred EEEeccCCCCceEEEEEEEECCCCeEEEEECCEEccccccc-CCcEECCCCEEEEccccccC--CCCcCCccceEEEEee
Confidence 233467899999999999986 478999999765432221 11123334568888654321 1122345789999999
Q ss_pred EEECcEEcc
Q psy5025 237 VLINNHELN 245 (533)
Q Consensus 237 l~in~~~l~ 245 (533)
+++.++.++
T Consensus 159 v~iw~~aLs 167 (206)
T 3pvn_A 159 VNMWDFVLS 167 (206)
T ss_dssp EEEESSCCC
T ss_pred EEEECccCC
Confidence 999998876
No 59
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.24 E-value=1.5e-07 Score=85.90 Aligned_cols=51 Identities=29% Similarity=0.620 Sum_probs=2.1
Q ss_pred eeecCCCC-CCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCccccc-cccc
Q psy5025 36 KGRSKECL-EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL-DLQV 86 (533)
Q Consensus 36 ~G~~~~C~-~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~~-~~~~ 86 (533)
.+|...|. +|.|.++||+|||+|++..++|.|.|++||+|+.|+..+ +.|.
T Consensus 33 ~~fw~~c~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~ 85 (195)
T 1nfu_B 33 NEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCS 85 (195)
T ss_dssp ------------------------------------------------CCGGG
T ss_pred ccccccCCCCcccCCCCCCCCCEeECCCCCeeEeCCCCceecccccccccccc
Confidence 45666777 899999999999999999999999999999999999876 5554
No 60
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.24 E-value=5.9e-07 Score=61.28 Aligned_cols=34 Identities=18% Similarity=0.408 Sum_probs=30.3
Q ss_pred CCCCC---CC-CCCeee--ecCCceEEecCCCCCcCcccc
Q psy5025 262 PCITQ---PC-GSGSCV--PLYDGYKCVCTQSCKESHLTE 295 (533)
Q Consensus 262 ~C~~~---pC-ngg~C~--~~~~~~~C~C~~g~~G~~c~~ 295 (533)
+|.++ || |||+|+ +...+|+|.|++||.|..|+.
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence 57777 99 999998 567899999999999999975
No 61
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.20 E-value=1.2e-06 Score=62.12 Aligned_cols=36 Identities=22% Similarity=0.573 Sum_probs=31.6
Q ss_pred CCCCCC---CC-CCCeee--ecCCceEEecCCCCCcCcccce
Q psy5025 261 HPCITQ---PC-GSGSCV--PLYDGYKCVCTQSCKESHLTEV 296 (533)
Q Consensus 261 ~~C~~~---pC-ngg~C~--~~~~~~~C~C~~g~~G~~c~~~ 296 (533)
++|.++ || |||+|+ +...+|+|.|++||.|..|+..
T Consensus 4 ~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ 45 (53)
T 1egf_A 4 PGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTR 45 (53)
T ss_dssp CCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCC
T ss_pred ccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCcc
Confidence 467776 99 999999 6778999999999999999864
No 62
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A*
Probab=98.18 E-value=7.9e-05 Score=68.70 Aligned_cols=151 Identities=13% Similarity=0.005 Sum_probs=95.2
Q ss_pred ccccCC---ceeEEEcCCcccccceeEEEEEEEecC-CCeeEEEccccCCCCCCeEEEEE-ECCEEEEEEEcCCCceEEE
Q psy5025 86 VPQFNG---SSYLRYQGLGEQYLSLLDLTIVFKAIE-PNGILLYNGHRADGVGDFIALYL-NDRYVDFTFDLGTGAATLR 160 (533)
Q Consensus 86 ~~~F~g---~syl~~~~~~~~~~~~~~ls~~FrT~~-~dGlLl~~~~~~~~~~~fl~l~L-~~G~l~~~~~~g~~~~~v~ 160 (533)
...|.. .+|+.+.+.-......+++.++++|.. ..+.||-.+... ..+-+.|.. ..+.+.+.+ ++.. ..
T Consensus 8 ~l~Fp~~s~~~yv~l~~~~~~~l~~fTvc~wv~~~~~~~~tlfSy~~~~--~~nel~l~~~~~~~~~l~i--~g~~--~~ 81 (204)
T 3kqr_A 8 VFVFPRESVTDHVNLITPLEKPLQNFTLCFRAYSDLSRAYSLFSYNTQG--RDNELLVYKERVGEYSLYI--GRHK--VT 81 (204)
T ss_dssp EEEECSCCSSCEEEEECCCCSCBSEEEEEEEEECCCCSCEEEEEEEETT--EEEEEEEEEEETTEEEEEE--TTEE--EE
T ss_pred EEEcCCCCCCCEEEEeCCCCCCcCCEEEEEEEEeCCCCCeEEEEEECCC--CCceEEEEEcCCCeEEEEE--CCeE--EE
Confidence 344543 589998764333356899999999865 455666444321 122344444 456776665 2222 23
Q ss_pred eeccccCCCcEEEEEEEEC--CEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEE
Q psy5025 161 SSNPISLGEWHKLRLTRTG--RHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVL 238 (533)
Q Consensus 161 s~~~lnDg~Wh~V~v~~~~--~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~ 238 (533)
...++++|+||+|.+++.+ +...|+|||......... ....+.....+.||....... ..+.....|.|-|.+++
T Consensus 82 ~~~~~~~g~W~Hv~~twd~~~G~~~lyvdG~~~~~~~~~-~g~~i~~~g~l~lGq~qd~~g--g~f~~~~~f~G~i~~v~ 158 (204)
T 3kqr_A 82 SKVIEKFPAPVHICVSWESSSGIAEFWINGTPLVKKGLR-QGYFVEAQPKIVLGQEQDSYG--GKFDRSQSFVGEIGDLY 158 (204)
T ss_dssp EECCCCSSCCEEEEEEEETTTCEEEEEETTEECCCEECC-TTCCBCSSCEEEESSCCSSSS--CCCCGGGCCCEEEEEEE
T ss_pred EecccCCCceEEEEEEEECCCCeEEEEECCEEeeeeccC-CCCEECCCcEEEEcccccCCC--CCcCcccceeEEEeeEE
Confidence 3467899999999999986 478999999764432211 111233345688887654321 22334578999999999
Q ss_pred ECcEEcc
Q psy5025 239 INNHELN 245 (533)
Q Consensus 239 in~~~l~ 245 (533)
+.++.++
T Consensus 159 iW~~aLs 165 (204)
T 3kqr_A 159 MWDSVLP 165 (204)
T ss_dssp EESSCCC
T ss_pred EECccCC
Confidence 9998876
No 63
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=98.18 E-value=5e-07 Score=95.80 Aligned_cols=40 Identities=28% Similarity=0.669 Sum_probs=37.3
Q ss_pred CCCCCCCCCCCCCeeee-CCCCceecCC-CCCCCCCcccccc
Q psy5025 44 EDKCNKTPCEHGGKCIT-TPGSSYCLCP-LGFTGDLCQTRLD 83 (533)
Q Consensus 44 ~d~C~~~pC~NggtC~~-~~~~y~C~C~-~g~~G~~Ce~~~~ 83 (533)
.|.|.++||+|||+|++ .+++|+|.|+ .||+|++||....
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~~~ 43 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIPEI 43 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEECH
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCCch
Confidence 58899999999999999 8999999999 9999999998753
No 64
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.16 E-value=8.5e-07 Score=77.41 Aligned_cols=48 Identities=31% Similarity=0.679 Sum_probs=36.7
Q ss_pred ecCCCC-CCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCccccccccc
Q psy5025 38 RSKECL-EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQV 86 (533)
Q Consensus 38 ~~~~C~-~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~~~~~~ 86 (533)
|...|. +|.|.++||+|||+|++..++|.|.|++||+|..|+.. +.|.
T Consensus 41 ~~~~c~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~-deC~ 89 (146)
T 1x7a_L 41 FWKQYVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELD-ATCN 89 (146)
T ss_dssp ---------CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCEE-CCTT
T ss_pred hhccCCCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCCC-cccc
Confidence 345676 79999999999999999999999999999999999875 4443
No 65
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=98.16 E-value=3.1e-07 Score=66.22 Aligned_cols=31 Identities=26% Similarity=0.726 Sum_probs=27.9
Q ss_pred CCCCCCeee--e--CCCCceecCCCCCCCCCcccc
Q psy5025 51 PCEHGGKCI--T--TPGSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 51 pC~NggtC~--~--~~~~y~C~C~~g~~G~~Ce~~ 81 (533)
||+|||+|+ + ..++|.|.|++||+|++||..
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~ 49 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCccc
Confidence 999999999 4 457899999999999999975
No 66
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.12 E-value=3.6e-07 Score=78.63 Aligned_cols=51 Identities=29% Similarity=0.620 Sum_probs=1.9
Q ss_pred eeecCCCC-CCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCccccc-cccc
Q psy5025 36 KGRSKECL-EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL-DLQV 86 (533)
Q Consensus 36 ~G~~~~C~-~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~~-~~~~ 86 (533)
.+|...|. +|.|.++||+|+|+|++..++|.|.|++||+|+.|+..+ +.|.
T Consensus 33 ~~~~~~c~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~ 85 (134)
T 2vh0_B 33 NEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCS 85 (134)
T ss_dssp ------------------------------------------------CCGGG
T ss_pred ccccccCCCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccc
Confidence 45556676 799999999999999999999999999999999999865 5454
No 67
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=98.12 E-value=4.8e-07 Score=80.56 Aligned_cols=41 Identities=32% Similarity=0.797 Sum_probs=37.5
Q ss_pred CCCCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCccccc
Q psy5025 42 CLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL 82 (533)
Q Consensus 42 C~~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~~ 82 (533)
|+.+.|.++||+++|+|++..++|.|.|++||+|.+||...
T Consensus 117 Ce~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~~ 157 (162)
T 1g1s_A 117 CYTASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVR 157 (162)
T ss_dssp EEECCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEEC
T ss_pred EEeCCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccCc
Confidence 44577999999999999999999999999999999999874
No 68
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.11 E-value=1.9e-06 Score=74.25 Aligned_cols=43 Identities=47% Similarity=0.967 Sum_probs=36.8
Q ss_pred CCCCC--CCCCCCCCeeeeCCCCceecCCCCCCCCCccccccccc
Q psy5025 44 EDKCN--KTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQV 86 (533)
Q Consensus 44 ~d~C~--~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~~~~~~ 86 (533)
+|+|. .+||.|+|+|++..++|+|.|++||+|+.|+.+++.+.
T Consensus 5 ideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~ 49 (135)
T 2vj3_A 5 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECV 49 (135)
T ss_dssp CCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTT
T ss_pred cccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCC
Confidence 78888 78999999999999999999999999999987766553
No 69
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.10 E-value=4.7e-07 Score=65.71 Aligned_cols=36 Identities=31% Similarity=0.736 Sum_probs=32.8
Q ss_pred CCCCCCCCC-CC--CeeeecCCceEEecCCCCC-cCcccc
Q psy5025 260 AHPCITQPC-GS--GSCVPLYDGYKCVCTQSCK-ESHLTE 295 (533)
Q Consensus 260 ~~~C~~~pC-ng--g~C~~~~~~~~C~C~~g~~-G~~c~~ 295 (533)
.++|.++|| || |+|++...+|.|.|++||. |..|+.
T Consensus 11 ~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 11 PAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTG 50 (61)
T ss_dssp CCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSS
T ss_pred CCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCCC
Confidence 367999999 99 8999999999999999999 999865
No 70
>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens}
Probab=98.09 E-value=5.6e-05 Score=71.62 Aligned_cols=125 Identities=12% Similarity=0.078 Sum_probs=85.8
Q ss_pred ceeeEEEEEEE-eCCCC---eEEEEeccCCCCCeEEEEEE--CCEEEEEEEcCC-ceEEEeeCce-eecCCCeEEEEEEE
Q psy5025 336 GYEFNIDMRIK-TSSSS---GLILWTGSSQSKDFLALGIH--NGYAHVMYNLGN-GEVLLENNQT-KINNGVWHRLTVHR 407 (533)
Q Consensus 336 ~~~~~i~~~~r-t~~~~---g~ll~~~~~~~~~~l~l~l~--~g~l~~~~~~g~-~~~~~~~~~~-~~~dg~wH~v~~~~ 407 (533)
..++.|.+.|| ..... ..||...+.....+|.|.+. ...+.+.+.... ....+.+... ++.||+||+|.+..
T Consensus 85 p~eFsil~tlr~~~~~~~~~~~L~sI~d~~~~~qlgv~l~g~~~~l~~~y~~~~g~~q~v~F~~~~~L~Dg~WHklalsV 164 (245)
T 2uur_A 85 PEEYSFLTTFRMTGSTLKKNWNIWQIQDSSGKEQVGIKINGQTQSVVFSYKGLDGSLQTAAFSNLSSLFDSQWHKIMIGV 164 (245)
T ss_dssp CSSEEEEEEEECCGGGGGCEEEEEEEECTTSCEEEEEEEEGGGTEEEEEEEBTTSCEEEEEECCCGGGCSSSCEEEEEEE
T ss_pred CCCEEEEEEEEcCCCCCCcceEEEEEECCCCcEEEEEEEcCCCCEEEEEecCCCCCeeEEEecCCccccCCCEEEEEEEE
Confidence 45688888888 34333 34777766554557777776 456777775443 3344555543 59999999999999
Q ss_pred eeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEecCCcceeeccCCceEEcCCCCccccccccc
Q psy5025 408 NFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKY 487 (533)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~lGg~~~~~~~~~~~~ 487 (533)
.+..++|+||=.......... ...++.++.++||-.... .
T Consensus 165 --------------------------------~~~~VtLyvDC~~~~~~~l~~-~~~i~~~G~~~lG~~~~~-------~ 204 (245)
T 2uur_A 165 --------------------------------ERSSATLFVDCNRIESLPIKP-RGPIDIDGFAVLGKLADN-------P 204 (245)
T ss_dssp --------------------------------ETTEEEEEETTEEEEEEECCC-BCCCCCSSEEEEEEESSC-------T
T ss_pred --------------------------------ECCEEEEEEecCcccccccCC-CCccccCCEEEEEEecCC-------C
Confidence 899999999998876654432 244566777888854211 1
Q ss_pred ccCceeeEEEEEE
Q psy5025 488 HHSFKGWISNLIL 500 (533)
Q Consensus 488 ~~~f~GCi~~l~i 500 (533)
...|+|=|++|+|
T Consensus 205 ~~~f~g~lQ~l~i 217 (245)
T 2uur_A 205 QVSVPFELQWMLI 217 (245)
T ss_dssp TCBCCEEEEEEEE
T ss_pred CCceEEEeEEEEE
Confidence 2379999999998
No 71
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.08 E-value=5.4e-06 Score=88.63 Aligned_cols=42 Identities=38% Similarity=0.910 Sum_probs=35.9
Q ss_pred CCCCCCCCCCCCCeeeeCCCC-cee-cCCCCCCC--CCccccccccc
Q psy5025 44 EDKCNKTPCEHGGKCITTPGS-SYC-LCPLGFTG--DLCQTRLDLQV 86 (533)
Q Consensus 44 ~d~C~~~pC~NggtC~~~~~~-y~C-~C~~g~~G--~~Ce~~~~~~~ 86 (533)
+++|..+||+++++|++...+ |+| .|++||+| ..|+ .+++|.
T Consensus 3 IDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~Ce-DiDEC~ 48 (634)
T 1yo8_A 3 PDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDECA 48 (634)
T ss_dssp -CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCC-BCCTTT
T ss_pred ccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCcc-cccccc
Confidence 588999999999999999865 999 99999998 8998 566654
No 72
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.07 E-value=1.3e-06 Score=76.02 Aligned_cols=45 Identities=33% Similarity=0.746 Sum_probs=39.8
Q ss_pred CCCC-CCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCccccccc
Q psy5025 40 KECL-EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDL 84 (533)
Q Consensus 40 ~~C~-~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~~~~ 84 (533)
..|. +|.|.++||+|+|+|++..++|.|.|++||+|+.|+..++.
T Consensus 42 ~~c~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~ 87 (142)
T 2c4f_L 42 ISYSDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDD 87 (142)
T ss_dssp HHHTTCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGG
T ss_pred ccCCccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccc
Confidence 3454 78999999999999999999999999999999999986443
No 73
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=98.07 E-value=2.3e-06 Score=58.43 Aligned_cols=34 Identities=21% Similarity=0.496 Sum_probs=29.2
Q ss_pred CCCCC---CCC-CCCeeeecC--CceEEecCCCCCcCcccc
Q psy5025 261 HPCIT---QPC-GSGSCVPLY--DGYKCVCTQSCKESHLTE 295 (533)
Q Consensus 261 ~~C~~---~pC-ngg~C~~~~--~~~~C~C~~g~~G~~c~~ 295 (533)
++|.+ +|| | |+|+... ++|+|.|++||+|.+|+.
T Consensus 4 ~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 4 TKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp ECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred ccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence 45777 999 9 8999754 689999999999999985
No 74
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=98.06 E-value=8.6e-07 Score=65.33 Aligned_cols=36 Identities=22% Similarity=0.381 Sum_probs=31.5
Q ss_pred CCCCCCCC-CCCeeee-----cCCceEEecCCCCCcCcccce
Q psy5025 261 HPCITQPC-GSGSCVP-----LYDGYKCVCTQSCKESHLTEV 296 (533)
Q Consensus 261 ~~C~~~pC-ngg~C~~-----~~~~~~C~C~~g~~G~~c~~~ 296 (533)
++|.++|| |||+|++ ...+|+|.|++||.|..|+..
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~ 48 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTEN 48 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEE
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcC
Confidence 46788999 9999997 567899999999999999853
No 75
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.05 E-value=2.7e-06 Score=73.97 Aligned_cols=48 Identities=31% Similarity=0.724 Sum_probs=43.9
Q ss_pred ceee-cCCCC--CCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCccccc
Q psy5025 35 IKGR-SKECL--EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL 82 (533)
Q Consensus 35 ~~G~-~~~C~--~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~~ 82 (533)
..|| +..|+ +++|..+||.|+++|++..++|+|.|++||+|++|+...
T Consensus 85 ~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~~~ 135 (143)
T 4d90_A 85 PRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYKG 135 (143)
T ss_dssp CTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTSCBC-
T ss_pred cCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCceecC
Confidence 6788 88996 799999999999999999999999999999999999864
No 76
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=98.01 E-value=0.00025 Score=63.44 Aligned_cols=133 Identities=14% Similarity=0.138 Sum_probs=93.0
Q ss_pred ceeEEEEEEEecCCCee-EEEccccCCCCCCeEEEEEECCEEEEEEEcCCCce--EEEee-ccccCCCcEEEEEEEEC-C
Q psy5025 106 SLLDLTIVFKAIEPNGI-LLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAA--TLRSS-NPISLGEWHKLRLTRTG-R 180 (533)
Q Consensus 106 ~~~~ls~~FrT~~~dGl-Ll~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~~--~v~s~-~~lnDg~Wh~V~v~~~~-~ 180 (533)
...+|.++||+..+... ||-..+. .....|+.|+|.+|++.+.+....+.. ....+ ....+++||+|.+..+. .
T Consensus 40 ~~gTI~v~fks~~~~~q~LfSIsN~-k~~n~yf~lyi~~g~lg~e~R~~~~~~~~~~~~~a~v~~~~~wntvaf~~d~~~ 118 (191)
T 2v73_A 40 EEGTIVTRFNMNDTSIQSLIGLSDG-NKANNYFSLYVSGGKVGYELRRQEGNGDFNVHHSADVTFNRGINTLALKIEKGI 118 (191)
T ss_dssp SSEEEEEEEEECCCSCEEEEEEECT-TCSSCEEEEEECSSEEEEEEEECTTSSCEEEEEEEECCCCSSCEEEEEEEETTT
T ss_pred CCcEEEEEEecCCCcceEEEEccCC-CCccceEEEEEeCCEEEEEEecCCCceeeeeecccceecCCceEEEEEEEcCCc
Confidence 46889999999884433 4444443 346899999999999999988754432 22222 22234599999999886 5
Q ss_pred EEEEEEcCccCceeeCCC--CceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEECcEEcc
Q psy5025 181 HAYLQVDRFPSSQILSPG--PFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELN 245 (533)
Q Consensus 181 ~~~L~VD~~~~~~~~~~~--~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in~~~l~ 245 (533)
..+|++||........+. ....+++ ..+.||+...... ....+|.|-|+++.+-+++++
T Consensus 119 ~~~ly~NG~~V~t~~~~~~~fi~~i~l-n~~~IG~~~r~sg-----~~~y~F~G~Id~~~iYn~aLs 179 (191)
T 2v73_A 119 GAKIFLNGSLVKTVSDPNIKFLNAINL-NSGFIGKTDRANG-----YNEYLFRGNIDFMNIYDKPVS 179 (191)
T ss_dssp EEEEEETTEEEEEEECTTCCCGGGSCC-CEEEESSCCCCSS-----SCCCCCCEEEEEEEEESSCCC
T ss_pred cEEEEECCEEEEEEecccccceeecCC-ceEEEcceeecCC-----ceeeccCCeEEEEEEEcCcCC
Confidence 999999998766554332 2333333 4799999886521 233679999999999888876
No 77
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.01 E-value=2.4e-06 Score=74.24 Aligned_cols=52 Identities=33% Similarity=0.711 Sum_probs=44.1
Q ss_pred ceee-cCCCCC--------------CCCCCCCCCCCCeee-------eCCCCceecCCCCCCCCCccccccccc
Q psy5025 35 IKGR-SKECLE--------------DKCNKTPCEHGGKCI-------TTPGSSYCLCPLGFTGDLCQTRLDLQV 86 (533)
Q Consensus 35 ~~G~-~~~C~~--------------d~C~~~pC~NggtC~-------~~~~~y~C~C~~g~~G~~Ce~~~~~~~ 86 (533)
..|| +..|+. +.|..+||+|+|+|+ +..++|.|.|++||+|..|+.+++.|.
T Consensus 28 ~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~i~~C~ 101 (143)
T 4d90_A 28 PDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECE 101 (143)
T ss_dssp CTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSCEECCTTT
T ss_pred CCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcccCCCcCC
Confidence 5677 777753 779999999999999 566899999999999999998777664
No 78
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=98.00 E-value=2e-06 Score=91.21 Aligned_cols=39 Identities=31% Similarity=0.801 Sum_probs=35.3
Q ss_pred CCCCCCCCCCCCCeeee-CCCCceecCC-CCCCCCCccccc
Q psy5025 44 EDKCNKTPCEHGGKCIT-TPGSSYCLCP-LGFTGDLCQTRL 82 (533)
Q Consensus 44 ~d~C~~~pC~NggtC~~-~~~~y~C~C~-~g~~G~~Ce~~~ 82 (533)
.|.|.++||+|||+|++ .+++|.|.|+ .||+|++||...
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~~ 41 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTPE 41 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCEEC
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCCch
Confidence 37899999999999996 5699999999 999999999863
No 79
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.93 E-value=3.8e-06 Score=83.36 Aligned_cols=44 Identities=27% Similarity=0.650 Sum_probs=40.3
Q ss_pred CCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCcccccccccc
Q psy5025 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVP 87 (533)
Q Consensus 44 ~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~~~~~~~ 87 (533)
.|+|.++||+|+|+|++..++|.|.|++||+|+.|+.++++|..
T Consensus 5 ~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~ 48 (317)
T 3h5c_B 5 GSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHP 48 (317)
T ss_dssp -CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCT
T ss_pred CCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCC
Confidence 58899999999999999999999999999999999988887754
No 80
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.91 E-value=4e-06 Score=59.12 Aligned_cols=32 Identities=22% Similarity=0.474 Sum_probs=28.7
Q ss_pred CCCC-CCCeee--ecCCceEEecCCCCCcCcccce
Q psy5025 265 TQPC-GSGSCV--PLYDGYKCVCTQSCKESHLTEV 296 (533)
Q Consensus 265 ~~pC-ngg~C~--~~~~~~~C~C~~g~~G~~c~~~ 296 (533)
++|| |||+|+ +..++|+|.|++||+|.+|+..
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~ 45 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR 45 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcC
Confidence 6899 999998 5678899999999999999864
No 81
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=97.88 E-value=1.9e-06 Score=76.18 Aligned_cols=40 Identities=33% Similarity=0.827 Sum_probs=36.8
Q ss_pred CCCCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCcccc
Q psy5025 42 CLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 42 C~~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~ 81 (533)
|+.+.|.++||+++|+|.+.+..|.|.|.++|+|++||..
T Consensus 117 Ce~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 117 CYTAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp EEECCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred eCcCCCCCCCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence 4457788999999999999999999999999999999975
No 82
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus}
Probab=97.84 E-value=0.00039 Score=69.77 Aligned_cols=126 Identities=17% Similarity=0.163 Sum_probs=83.1
Q ss_pred ceeeEEEEEEEeCC--CCeEEEEeccCCCCCeEEEEEE--------CCEEEEEEEcCCceEEEeeCceeecCCCeEEEEE
Q psy5025 336 GYEFNIDMRIKTSS--SSGLILWTGSSQSKDFLALGIH--------NGYAHVMYNLGNGEVLLENNQTKINNGVWHRLTV 405 (533)
Q Consensus 336 ~~~~~i~~~~rt~~--~~g~ll~~~~~~~~~~l~l~l~--------~g~l~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~ 405 (533)
...++++++||... ....|+-. ...+.+.+. .++|.+. .+ +. +. +...+.+|+||+|.+
T Consensus 160 ~~~~T~eawv~~~~~~~~~ti~g~-----e~~~~lr~gd~~~g~~~~~~Lq~~--~~-~~--~~-s~~~l~~g~W~HvA~ 228 (355)
T 4dqa_A 160 FSSFTYEALINVDYFLDNNTIMGT-----EGVMILRIGDAGGGITPKDYLEVA--GG-QN--YR-VTKPLLTNRWYHVAL 228 (355)
T ss_dssp BSSEEEEEEEEESCCCSSEEEEEE-----TTTEEEEEEEGGGTSEEEEEEEEE--ES-SC--EE-CSSCCCSSCEEEEEE
T ss_pred CCcEEEEEEEECCcCCCcceEEeC-----CCeEEEEEecCCCCCCcCCeEEEe--cC-Cc--cc-cCCcccCCCEEEEEE
Confidence 45789999999975 34455432 234455553 3455553 22 22 22 456899999999999
Q ss_pred EEeeeeeecCCcccccCCcchhhhhhhhhcccccc--CcEEEEEECCceeeeEecCCcceeeccCCceEEcCCCCccccc
Q psy5025 406 HRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRT--GKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELT 483 (533)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~lGg~~~~~~~~ 483 (533)
.+ + +..+.|+|||..............+.....++||+......
T Consensus 229 t~--------------------------------d~~~~~~~lYvNG~~~~~~~~~~~~~~~~~~~~l~IG~~~~~~~-- 274 (355)
T 4dqa_A 229 TY--------------------------------DQPTGKTGIYVNGEKWAGSDWGIDGFDPNSDMGFYIGRIYGFKW-- 274 (355)
T ss_dssp EE--------------------------------ETTTTEEEEEETTEEEEEEECCCCCBCTTSTTCEEESCCTTCTT--
T ss_pred EE--------------------------------ECCCCEEEEEECCEEEEEEecCCCccccCCCceEEECCCCCCCC--
Confidence 99 6 78999999999877654332222333345699998643210
Q ss_pred ccccccCceeeEEEEEEcCceEEeecc
Q psy5025 484 RSKYHHSFKGWISNLILSNDYQVKLPL 510 (533)
Q Consensus 484 ~~~~~~~f~GCi~~l~i~~~~~l~~~~ 510 (533)
....|.|-|.+++| ..+.|...+
T Consensus 275 ---~~~~f~G~IdevrI-w~~aLs~~e 297 (355)
T 4dqa_A 275 ---GERPFHGKMSEVRV-WSVARTENQ 297 (355)
T ss_dssp ---CCCCCEEEEEEEEE-ESSCCCHHH
T ss_pred ---CCcceeEEEEEEEE-ECCcCCHHH
Confidence 24689999999999 677665544
No 83
>1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A
Probab=97.83 E-value=0.00064 Score=64.60 Aligned_cols=124 Identities=15% Similarity=0.197 Sum_probs=84.4
Q ss_pred ceeEEEEEEEec-CCCeeEEEccccCCCCCCeEEEEEEC--CEEEEEEEcCCCceEEE-eeccccCCCcEEEEEEEECCE
Q psy5025 106 SLLDLTIVFKAI-EPNGILLYNGHRADGVGDFIALYLND--RYVDFTFDLGTGAATLR-SSNPISLGEWHKLRLTRTGRH 181 (533)
Q Consensus 106 ~~~~ls~~FrT~-~~dGlLl~~~~~~~~~~~fl~l~L~~--G~l~~~~~~g~~~~~v~-s~~~lnDg~Wh~V~v~~~~~~ 181 (533)
..+.|...||.. ...|.||...+.. +...++.|.+.. ..|.+.|...++...+. ....+.||+||+|.+...+..
T Consensus 72 ~eFsil~tlr~~~~~~g~LfsI~~~~-g~~~ql~l~~~G~~~~l~~~Y~~~g~~~~~~f~~~~L~Dg~WH~lalsV~~~~ 150 (251)
T 1za4_A 72 KGFLLLASLRQMKKTRGTLLALERKD-HSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSVEEALLATGQWKSITLFVQEDR 150 (251)
T ss_dssp TEEEEEEEEEECTTCEEEEEEEEETT-SSCEEEEEEEETTTTEEEEEEEETTEEEEEEESSCCCCSSSCEEEEEEEETTE
T ss_pred CcEEEEEEEEecCCCCeEEEEEEeCC-CCEEEEEEEECCCCcEEEEEEEcCCCeeeEEEecccccCCCEEEEEEEEECCE
Confidence 468888899965 5667888766542 224566666544 36888886554333333 246799999999999999999
Q ss_pred EEEEEcCccCceeeCCCCceee-----ecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEEC
Q psy5025 182 AYLQVDRFPSSQILSPGPFTQL-----SLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240 (533)
Q Consensus 182 ~~L~VD~~~~~~~~~~~~~~~l-----~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in 240 (533)
+.|+||...........+...+ .....++||..... .. |.|=|+++++-
T Consensus 151 VtLyvDC~~~~~~~l~~~~~~i~~~~~~~~~~~~iGq~~~~---------~~-F~G~lq~l~i~ 204 (251)
T 1za4_A 151 AQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVN---------DN-FQGVLQNVRFV 204 (251)
T ss_dssp EEEEETTSCCEEEECSSCGGGTSCTTGGGTEEEEESCCSTT---------CB-CCEEEEEEEEE
T ss_pred EEEEECCcccceeeccCccccccccccCCCcEEEEEecCCC---------CC-CeEEeEEEEEE
Confidence 9999999876655443322222 11346889966532 14 99999999883
No 84
>2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A
Probab=97.82 E-value=0.00052 Score=63.42 Aligned_cols=123 Identities=16% Similarity=0.226 Sum_probs=84.9
Q ss_pred ceeEEEEEEEec-CCCeeEEEccccCCCCCCeEEEEEECC--EEEEEEEcCCCceEEEe-eccccCCCcEEEEEEEECCE
Q psy5025 106 SLLDLTIVFKAI-EPNGILLYNGHRADGVGDFIALYLNDR--YVDFTFDLGTGAATLRS-SNPISLGEWHKLRLTRTGRH 181 (533)
Q Consensus 106 ~~~~ls~~FrT~-~~dGlLl~~~~~~~~~~~fl~l~L~~G--~l~~~~~~g~~~~~v~s-~~~lnDg~Wh~V~v~~~~~~ 181 (533)
..+.|.+.||.. ...|.||-..+. .+...++.|.+... .|.+.|...+....+.. ...+.||+||+|.+...+..
T Consensus 62 ~eFsi~~t~r~~~~~~~~LfsI~~~-~~~~~ql~l~l~g~~~~l~~~y~~~g~~~~~~f~~v~l~dg~WH~l~l~V~~~~ 140 (209)
T 2erf_A 62 KGFLLLASLRQMKKTRGTLLALERK-DHSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSVEEALLATGQWKSITLFVQEDR 140 (209)
T ss_dssp TEEEEEEEEEECTTCEEEEEEEEET-TSSCEEEEEEEETTTTEEEEEEEETTEEEEEEESSCCCCSSSEEEEEEEEETTE
T ss_pred CCEEEEEEEEcCCCCCceEEEEEcC-CCCEEEEEEEEcCCCCEEEEEEcCCCCEEEEEEeccccCCCcEEEEEEEEECCE
Confidence 468888899954 567777766554 22357888888643 78888865433333433 35699999999999999999
Q ss_pred EEEEEcCccCceeeCCCCceee-e----cCCCEEEcCcCCCCccCCCcccccCceeeeeeEEE
Q psy5025 182 AYLQVDRFPSSQILSPGPFTQL-S----LSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLI 239 (533)
Q Consensus 182 ~~L~VD~~~~~~~~~~~~~~~l-~----~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~i 239 (533)
++|+||...........+...+ + ....+++|..... .. |.|=|++++|
T Consensus 141 v~L~vDC~~~~~~~l~~~~~~~~~~~~~~~~~~~iGq~~~~---------~~-F~G~lq~l~i 193 (209)
T 2erf_A 141 AQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVN---------DN-FQGVLQNVRF 193 (209)
T ss_dssp EEEEETTTEEEEEECSSCGGGTCCTTHHHHEEEEESCCTTT---------CB-CCEEEEEEEE
T ss_pred EEEEEcCeEeEeEEccCCchhccccccCCceEEEEecCCCC---------CC-CeEEeEEEEE
Confidence 9999999775544443322222 1 1346889976532 14 9999999988
No 85
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.80 E-value=6.3e-06 Score=68.63 Aligned_cols=39 Identities=38% Similarity=0.832 Sum_probs=34.7
Q ss_pred CCCCCCCC--------CCCCCeeeeCCCCceecCCCCCCCCCccccc
Q psy5025 44 EDKCNKTP--------CEHGGKCITTPGSSYCLCPLGFTGDLCQTRL 82 (533)
Q Consensus 44 ~d~C~~~p--------C~NggtC~~~~~~y~C~C~~g~~G~~Ce~~~ 82 (533)
+|+|..+| |.|+|+|++..++|+|.|++||+|+.|+...
T Consensus 6 ~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~ 52 (114)
T 1aut_L 6 GDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREV 52 (114)
T ss_dssp --CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEEC
T ss_pred cccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCC
Confidence 57898888 9999999999999999999999999999764
No 86
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus}
Probab=97.73 E-value=0.00032 Score=70.37 Aligned_cols=141 Identities=13% Similarity=0.158 Sum_probs=89.9
Q ss_pred ccccCCceeEEEcCCcccccceeEEEEEEEecCC--CeeEEEccccCCCCCCeEEEEE--------ECCEEEEEEEcCCC
Q psy5025 86 VPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEP--NGILLYNGHRADGVGDFIALYL--------NDRYVDFTFDLGTG 155 (533)
Q Consensus 86 ~~~F~g~syl~~~~~~~~~~~~~~ls~~FrT~~~--dGlLl~~~~~~~~~~~fl~l~L--------~~G~l~~~~~~g~~ 155 (533)
++.|.+ .|+.++.........++++.+++...- ...|+- . ...+.+.+ ..++|++. .+
T Consensus 142 ~~~~~~-~~~~~~~~~~~~~~~~T~eawv~~~~~~~~~ti~g--~-----e~~~~lr~gd~~~g~~~~~~Lq~~--~~-- 209 (355)
T 4dqa_A 142 AGNFSN-HYISVKFPVGTFFSSFTYEALINVDYFLDNNTIMG--T-----EGVMILRIGDAGGGITPKDYLEVA--GG-- 209 (355)
T ss_dssp EEEEES-CCEEECCCTTCCBSSEEEEEEEEESCCCSSEEEEE--E-----TTTEEEEEEEGGGTSEEEEEEEEE--ES--
T ss_pred cceecC-CEEEcccCCCCCCCcEEEEEEEECCcCCCcceEEe--C-----CCeEEEEEecCCCCCCcCCeEEEe--cC--
Confidence 345665 677776433334567899999998653 333432 1 23344444 33455553 22
Q ss_pred ceEEEeeccccCCCcEEEEEEEE--CCEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCccCCCcccccCceee
Q psy5025 156 AATLRSSNPISLGEWHKLRLTRT--GRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGC 233 (533)
Q Consensus 156 ~~~v~s~~~lnDg~Wh~V~v~~~--~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GC 233 (533)
..+.+...+.+|+||||.+++. +..+.|+|||..............+.-...++||...... . ....|.|-
T Consensus 210 -~~~~s~~~l~~g~W~HvA~t~d~~~~~~~lYvNG~~~~~~~~~~~~~~~~~~~~l~IG~~~~~~-----~-~~~~f~G~ 282 (355)
T 4dqa_A 210 -QNYRVTKPLLTNRWYHVALTYDQPTGKTGIYVNGEKWAGSDWGIDGFDPNSDMGFYIGRIYGFK-----W-GERPFHGK 282 (355)
T ss_dssp -SCEECSSCCCSSCEEEEEEEEETTTTEEEEEETTEEEEEEECCCCCBCTTSTTCEEESCCTTCT-----T-CCCCCEEE
T ss_pred -CccccCCcccCCCEEEEEEEEECCCCEEEEEECCEEEEEEecCCCccccCCCceEEECCCCCCC-----C-CCcceeEE
Confidence 2455667899999999999999 8899999999765544332211111112569999865321 0 13689999
Q ss_pred eeeEEECcEEcc
Q psy5025 234 IQKVLINNHELN 245 (533)
Q Consensus 234 I~~l~in~~~l~ 245 (533)
|.+++|.++.+.
T Consensus 283 IdevrIw~~aLs 294 (355)
T 4dqa_A 283 MSEVRVWSVART 294 (355)
T ss_dssp EEEEEEESSCCC
T ss_pred EEEEEEECCcCC
Confidence 999999998876
No 87
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.69 E-value=2e-05 Score=61.33 Aligned_cols=43 Identities=40% Similarity=0.940 Sum_probs=35.9
Q ss_pred CC-CCCCCC-CCCCCCCeeeeCCCCceecCCCCCC--CCCccccccccc
Q psy5025 42 CL-EDKCNK-TPCEHGGKCITTPGSSYCLCPLGFT--GDLCQTRLDLQV 86 (533)
Q Consensus 42 C~-~d~C~~-~pC~NggtC~~~~~~y~C~C~~g~~--G~~Ce~~~~~~~ 86 (533)
|. +|+|.. +||.| |+|++..++|+|.|++||+ |..|+ +++++.
T Consensus 2 C~dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~-dideC~ 48 (82)
T 1emn_A 2 AVDMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNECV-DTDECS 48 (82)
T ss_dssp CCCCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEEE-ECCGGG
T ss_pred CCccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCccC-Cccccc
Confidence 44 789985 89987 8999999999999999997 99995 455553
No 88
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=97.64 E-value=2.9e-05 Score=61.63 Aligned_cols=35 Identities=17% Similarity=0.570 Sum_probs=31.8
Q ss_pred CCCCCCCC-CCCeeeecC--CceEEecCCCCCcCcccc
Q psy5025 261 HPCITQPC-GSGSCVPLY--DGYKCVCTQSCKESHLTE 295 (533)
Q Consensus 261 ~~C~~~pC-ngg~C~~~~--~~~~C~C~~g~~G~~c~~ 295 (533)
++|.++|| |+|+|++.. .+|.|.|++||.|..|+.
T Consensus 49 ~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 86 (91)
T 1tpg_A 49 KSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEI 86 (91)
T ss_dssp EECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCB
T ss_pred CcccCCCCCCCCEeecCCCCCCeEeECCCCCcCCcCCc
Confidence 46888999 999999987 899999999999999974
No 89
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.62 E-value=1.4e-05 Score=56.11 Aligned_cols=31 Identities=16% Similarity=0.356 Sum_probs=27.1
Q ss_pred CCCC-CCCeeee----cCCceEEecCCCCCcCcccc
Q psy5025 265 TQPC-GSGSCVP----LYDGYKCVCTQSCKESHLTE 295 (533)
Q Consensus 265 ~~pC-ngg~C~~----~~~~~~C~C~~g~~G~~c~~ 295 (533)
++|| |||+|+. ...+|.|.|++||.|.+|+.
T Consensus 13 ~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 13 AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 5699 9999996 34689999999999999985
No 90
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=97.56 E-value=1.7e-05 Score=57.05 Aligned_cols=39 Identities=15% Similarity=0.334 Sum_probs=29.7
Q ss_pred CCCCCCCCCCC-CCCeee--e--cCCceEEecCCCCCcCcccce
Q psy5025 258 NCAHPCITQPC-GSGSCV--P--LYDGYKCVCTQSCKESHLTEV 296 (533)
Q Consensus 258 ~C~~~C~~~pC-ngg~C~--~--~~~~~~C~C~~g~~G~~c~~~ 296 (533)
.|++....+|| |||+|+ + ..+.|.|.|++||.|.+|+..
T Consensus 6 ~C~~~~~~~pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~ 49 (58)
T 3ltf_D 6 KCPETFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (58)
T ss_dssp CCCHHHHHHTSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEE
T ss_pred cCCccccCCcCCCCCEEeCCccCCCCCEEeECCCCCccCCCccc
Confidence 34433334499 999998 3 446799999999999999863
No 91
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=97.56 E-value=2.7e-05 Score=69.60 Aligned_cols=46 Identities=33% Similarity=0.827 Sum_probs=39.3
Q ss_pred ceee-cCCCC--CCCCCC-CCCCCCCeeeeC-CCCceecCCCCCCCCCccc
Q psy5025 35 IKGR-SKECL--EDKCNK-TPCEHGGKCITT-PGSSYCLCPLGFTGDLCQT 80 (533)
Q Consensus 35 ~~G~-~~~C~--~d~C~~-~pC~NggtC~~~-~~~y~C~C~~g~~G~~Ce~ 80 (533)
..|| +..|+ +++|.. +||+|+|+|++. .++|.|.|++||+|++||.
T Consensus 119 ~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 119 ETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEI 169 (169)
T ss_dssp CTTEETTTTCEESCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTTSCC
T ss_pred CCCCCCCcccCCCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcCcCC
Confidence 5678 88887 678875 899999999996 6889999999999999974
No 92
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=97.53 E-value=3.8e-05 Score=64.52 Aligned_cols=33 Identities=30% Similarity=0.895 Sum_probs=29.8
Q ss_pred CCCCCCeeeeCC--CCc-eecCCCCCCCCCcccccc
Q psy5025 51 PCEHGGKCITTP--GSS-YCLCPLGFTGDLCQTRLD 83 (533)
Q Consensus 51 pC~NggtC~~~~--~~y-~C~C~~g~~G~~Ce~~~~ 83 (533)
||+|||+|++.. .+| +|.|+.+|+|++||.++.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~ 37 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS 37 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc
Confidence 899999999985 667 999999999999998764
No 93
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.50 E-value=2.9e-05 Score=61.08 Aligned_cols=40 Identities=33% Similarity=0.823 Sum_probs=35.1
Q ss_pred CCCCCCCC--CCCCCeeeeCCCCceecCCCCCC----CCCcccccccc
Q psy5025 44 EDKCNKTP--CEHGGKCITTPGSSYCLCPLGFT----GDLCQTRLDLQ 85 (533)
Q Consensus 44 ~d~C~~~p--C~NggtC~~~~~~y~C~C~~g~~----G~~Ce~~~~~~ 85 (533)
+|+|..+| | ++++|++..++|+|.|++||+ |+.|+ ++++|
T Consensus 3 ideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~-dideC 48 (87)
T 1z6c_A 3 VDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDEC 48 (87)
T ss_dssp SCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEE-CCCHH
T ss_pred cccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCC-CcCee
Confidence 58899888 9 889999999999999999998 88996 56655
No 94
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=97.48 E-value=2.8e-05 Score=58.76 Aligned_cols=37 Identities=32% Similarity=0.802 Sum_probs=29.6
Q ss_pred CCCCC---CCCCCCCCeeee--CCCCceecCCCCCCCCCcccc
Q psy5025 44 EDKCN---KTPCEHGGKCIT--TPGSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 44 ~d~C~---~~pC~NggtC~~--~~~~y~C~C~~g~~G~~Ce~~ 81 (533)
.+.|. .++|.|| +|.- ..+.+.|.|++||+|..||..
T Consensus 37 ~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE~l 78 (79)
T 1xdt_R 37 RDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGERCHGL 78 (79)
T ss_dssp --CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEESTTCCEE
T ss_pred CCCCCccccCcCCCC-EeeeecCCCCeEEEcCCCccccccccc
Confidence 46677 7899997 9953 347899999999999999964
No 95
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.47 E-value=4.3e-05 Score=59.40 Aligned_cols=42 Identities=33% Similarity=0.775 Sum_probs=36.6
Q ss_pred ceee---cCCCC-CCCCC-CCCCCCCCeeeeCCCCceecCCCCCCCCC
Q psy5025 35 IKGR---SKECL-EDKCN-KTPCEHGGKCITTPGSSYCLCPLGFTGDL 77 (533)
Q Consensus 35 ~~G~---~~~C~-~d~C~-~~pC~NggtC~~~~~~y~C~C~~g~~G~~ 77 (533)
..|| +..|+ +|+|. .+||.| |+|++..++|.|.|++||+|..
T Consensus 31 ~~Gy~~~g~~C~dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 31 PFGYILAGNECVDTDECSVGNPCGN-GTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp CTTEEEETTEEEECCGGGTCCTTSS-SCEEECSSSEEECCSSSSCCCS
T ss_pred CCCeECCCCccCCcccccCCCCCCC-CEeECCCCCEEeECCCCeEeCC
Confidence 5677 67887 89997 799998 5999999999999999998853
No 96
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=97.47 E-value=7e-05 Score=51.61 Aligned_cols=39 Identities=26% Similarity=0.727 Sum_probs=31.3
Q ss_pred CCCCCCCCCCCCCCCCCeeeeCC--CCceecCCCCCCCCCcccc
Q psy5025 40 KECLEDKCNKTPCEHGGKCITTP--GSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 40 ~~C~~d~C~~~pC~NggtC~~~~--~~y~C~C~~g~~G~~Ce~~ 81 (533)
..|.++. .++|.|| +|.-.. +.+.|.|+.||+|.+||..
T Consensus 6 ~~C~~~~--~~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 3e50_C 6 NDCPDSH--TQFCFHG-TCRFLVQEDKPACVCHSGYVGARCEHA 46 (50)
T ss_pred cccChhh--cCcccCC-EEeeccCCCCeEEECCCCCcccCCCce
Confidence 4455433 6899998 999643 8899999999999999974
No 97
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=97.46 E-value=3.7e-05 Score=81.46 Aligned_cols=36 Identities=36% Similarity=0.748 Sum_probs=33.6
Q ss_pred CCCCCCCC-CCCeeee-cCCceEEecC-CCCCcCcccce
Q psy5025 261 HPCITQPC-GSGSCVP-LYDGYKCVCT-QSCKESHLTEV 296 (533)
Q Consensus 261 ~~C~~~pC-ngg~C~~-~~~~~~C~C~-~g~~G~~c~~~ 296 (533)
++|.++|| |||+|++ .+++|+|.|+ .||.|..|+..
T Consensus 3 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 41 (553)
T 1q4g_A 3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP 41 (553)
T ss_dssp CGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred CcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCC
Confidence 57999999 9999999 8999999999 99999999864
No 98
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.45 E-value=4.3e-05 Score=59.95 Aligned_cols=41 Identities=34% Similarity=0.831 Sum_probs=34.5
Q ss_pred CCCCCCCC--CCCCCeeeeCCCCceecCCCCCC-----CCCccccccccc
Q psy5025 44 EDKCNKTP--CEHGGKCITTPGSSYCLCPLGFT-----GDLCQTRLDLQV 86 (533)
Q Consensus 44 ~d~C~~~p--C~NggtC~~~~~~y~C~C~~g~~-----G~~Ce~~~~~~~ 86 (533)
+|+|..+| |.|+ +|++..++|+|.|++||+ |..|+ ++++|.
T Consensus 3 ideC~~~~~~C~~g-~C~n~~g~y~C~C~~Gy~~~~~~g~~C~-dideC~ 50 (86)
T 1lmj_A 3 IDECRISPDLCGRG-QCVNTPGDFECKCDEGYESGFMMMKNCM-DIDECQ 50 (86)
T ss_dssp CCTTTTCSSTTTTS-CEEEETTEEEECCCSSEEECTTTSSSEE-ECCHHH
T ss_pred cccccCCCCCCCCC-EEECCCCCEEeeCCCCcCccCCCCCccC-Cccccc
Confidence 68898766 9875 999999999999999997 88897 566553
No 99
>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens}
Probab=97.44 E-value=0.0015 Score=61.86 Aligned_cols=126 Identities=17% Similarity=0.125 Sum_probs=83.3
Q ss_pred ceeEEEEEEE-ecCCCe---eEEEccccCCCCCCeEEEEEEC--CEEEEEEEcCCC-ceEEEeec--cccCCCcEEEEEE
Q psy5025 106 SLLDLTIVFK-AIEPNG---ILLYNGHRADGVGDFIALYLND--RYVDFTFDLGTG-AATLRSSN--PISLGEWHKLRLT 176 (533)
Q Consensus 106 ~~~~ls~~Fr-T~~~dG---lLl~~~~~~~~~~~fl~l~L~~--G~l~~~~~~g~~-~~~v~s~~--~lnDg~Wh~V~v~ 176 (533)
..+.|.+.|| .....+ .||-..+.. ...++.|.+.. ..|.+.+....+ ...+.... ++.||+||+|.+.
T Consensus 86 ~eFsil~tlr~~~~~~~~~~~L~sI~d~~--~~~qlgv~l~g~~~~l~~~y~~~~g~~q~v~F~~~~~L~Dg~WHklals 163 (245)
T 2uur_A 86 EEYSFLTTFRMTGSTLKKNWNIWQIQDSS--GKEQVGIKINGQTQSVVFSYKGLDGSLQTAAFSNLSSLFDSQWHKIMIG 163 (245)
T ss_dssp SSEEEEEEEECCGGGGGCEEEEEEEECTT--SCEEEEEEEEGGGTEEEEEEEBTTSCEEEEEECCCGGGCSSSCEEEEEE
T ss_pred CCEEEEEEEEcCCCCCCcceEEEEEECCC--CcEEEEEEEcCCCCEEEEEecCCCCCeeEEEecCCccccCCCEEEEEEE
Confidence 4678888888 443333 366655442 25688888874 456666654433 33444444 5899999999999
Q ss_pred EECCEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEECcE
Q psy5025 177 RTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNH 242 (533)
Q Consensus 177 ~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in~~ 242 (533)
..+..+.|+||-.......... ...++..+.++||-..... ...|.|=|+++.|-..
T Consensus 164 V~~~~VtLyvDC~~~~~~~l~~-~~~i~~~G~~~lG~~~~~~--------~~~f~g~lQ~l~i~~d 220 (245)
T 2uur_A 164 VERSSATLFVDCNRIESLPIKP-RGPIDIDGFAVLGKLADNP--------QVSVPFELQWMLIHCD 220 (245)
T ss_dssp EETTEEEEEETTEEEEEEECCC-BCCCCCSSEEEEEEESSCT--------TCBCCEEEEEEEEESC
T ss_pred EECCEEEEEEecCcccccccCC-CCccccCCEEEEEEecCCC--------CCceEEEeEEEEEEcC
Confidence 9999999999987655443332 2345556778888653221 1379999999988443
No 100
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=97.42 E-value=4.4e-05 Score=67.78 Aligned_cols=41 Identities=27% Similarity=0.722 Sum_probs=36.5
Q ss_pred CCCCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCccccc
Q psy5025 42 CLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL 82 (533)
Q Consensus 42 C~~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~~ 82 (533)
|+...|.+++|+++|+|.+.+.+|.|.|++||.|.+||...
T Consensus 117 Ce~~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~~ 157 (164)
T 3cfw_A 117 CYTASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQFVQ 157 (164)
T ss_dssp EEECCCCTTSSCSSEEEEEETTEEEEEECTTCBSSSSCBC-
T ss_pred EccCCCCCCcCCCCCeecccCCCceeeeCCCcccccccccc
Confidence 44567889999999999999999999999999999999764
No 101
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=97.31 E-value=9.4e-05 Score=78.49 Aligned_cols=36 Identities=36% Similarity=0.890 Sum_probs=32.6
Q ss_pred CCCCCCCC-CCCeeee-cCCceEEecC-CCCCcCcccce
Q psy5025 261 HPCITQPC-GSGSCVP-LYDGYKCVCT-QSCKESHLTEV 296 (533)
Q Consensus 261 ~~C~~~pC-ngg~C~~-~~~~~~C~C~-~g~~G~~c~~~ 296 (533)
++|.++|| |||+|++ .+++|.|.|+ +||.|..|+..
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 40 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTP 40 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCEE
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCCc
Confidence 57999999 9999995 5799999999 99999999863
No 102
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.31 E-value=0.00012 Score=63.57 Aligned_cols=37 Identities=22% Similarity=0.574 Sum_probs=32.7
Q ss_pred CCCCCCCCC-CCCeeeecCCceEEecCCCCCcCcccce
Q psy5025 260 AHPCITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEV 296 (533)
Q Consensus 260 ~~~C~~~pC-ngg~C~~~~~~~~C~C~~g~~G~~c~~~ 296 (533)
.+.|.++|| |+|+|++...+|.|.|++||.|..|+.+
T Consensus 48 ideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~ 85 (146)
T 1x7a_L 48 GDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELD 85 (146)
T ss_dssp --CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCEE
T ss_pred cCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCCC
Confidence 368999999 9999999999999999999999988754
No 103
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=97.31 E-value=0.00011 Score=65.18 Aligned_cols=39 Identities=36% Similarity=0.890 Sum_probs=34.4
Q ss_pred cCCCCCCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCcccc
Q psy5025 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 39 ~~~C~~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~ 81 (533)
.+.|....|. .+|.|||.|+. -..|.||.||+|+.|+..
T Consensus 143 ~K~C~~~~C~-~~C~ngG~Cv~---P~~C~C~~Gw~G~~C~~~ 181 (188)
T 2ygo_A 143 FKTCQQAECP-GGCRNGGFCNE---RRICECPDGFHGPHCEGT 181 (188)
T ss_dssp EEEECCCCCT-TCCCTTCEECT---TSCEECCTTCBTTTTCBC
T ss_pred cccccCCccC-CCCCCCCEeCC---CCcccCcCCCCCCCCcCC
Confidence 6788888897 59999999986 358999999999999986
No 104
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=97.24 E-value=0.00018 Score=49.58 Aligned_cols=36 Identities=28% Similarity=0.756 Sum_probs=29.6
Q ss_pred CCCCC---CCCCCCCCeee--eCCCCceecCCCCCCCCCccc
Q psy5025 44 EDKCN---KTPCEHGGKCI--TTPGSSYCLCPLGFTGDLCQT 80 (533)
Q Consensus 44 ~d~C~---~~pC~NggtC~--~~~~~y~C~C~~g~~G~~Ce~ 80 (533)
.+.|. .+.|.|| +|. ...+.+.|.|+.+|+|..||.
T Consensus 9 ~~~C~~~~~~yC~nG-~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 9 KNPCNAEFQNFCIHG-ECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp CCTTTTTGGGTCSSS-EEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcccCchhhCcCCCC-EEEEecCCCCeeEECCCCcccccccc
Confidence 35666 4899995 998 445789999999999999985
No 105
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=97.23 E-value=0.00011 Score=65.04 Aligned_cols=36 Identities=22% Similarity=0.572 Sum_probs=33.6
Q ss_pred CCCCCCCC-CCCeeeecCCceEEecCCCCCcCcccce
Q psy5025 261 HPCITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEV 296 (533)
Q Consensus 261 ~~C~~~pC-ngg~C~~~~~~~~C~C~~g~~G~~c~~~ 296 (533)
++|.++|| ++|+|++..++|.|.|++||.|..|+..
T Consensus 120 ~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 120 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYV 156 (162)
T ss_dssp CCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred CCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccC
Confidence 57999999 9999999999999999999999999864
No 106
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=97.20 E-value=0.00019 Score=61.98 Aligned_cols=33 Identities=30% Similarity=0.863 Sum_probs=29.1
Q ss_pred CCCCCCeeeeC--CCCc-eecCCCCCCCCCcccccc
Q psy5025 51 PCEHGGKCITT--PGSS-YCLCPLGFTGDLCQTRLD 83 (533)
Q Consensus 51 pC~NggtC~~~--~~~y-~C~C~~g~~G~~Ce~~~~ 83 (533)
||+|||+|++. ...+ .|.|+.+|.|++|+.+..
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~ 49 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS 49 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESS
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceecccc
Confidence 99999999887 3667 899999999999998754
No 107
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.18 E-value=0.00014 Score=62.87 Aligned_cols=36 Identities=25% Similarity=0.721 Sum_probs=33.3
Q ss_pred CCCCCCCCC-CCCeeeecCCceEEecCCCCCcCcccc
Q psy5025 260 AHPCITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTE 295 (533)
Q Consensus 260 ~~~C~~~pC-ngg~C~~~~~~~~C~C~~g~~G~~c~~ 295 (533)
.+.|.++|| |+|+|++...+|.|.|++||.|..|+.
T Consensus 47 id~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~ 83 (142)
T 2c4f_L 47 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCET 83 (142)
T ss_dssp CCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCE
T ss_pred cCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCcccc
Confidence 367999999 999999999999999999999999975
No 108
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=97.12 E-value=0.00018 Score=49.76 Aligned_cols=32 Identities=28% Similarity=0.773 Sum_probs=27.7
Q ss_pred CCCCCCCCeee--eCCCCceecCCCCCCCCCcccc
Q psy5025 49 KTPCEHGGKCI--TTPGSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 49 ~~pC~NggtC~--~~~~~y~C~C~~g~~G~~Ce~~ 81 (533)
.+.|.| |+|. ...+.+.|.|+.||+|..||..
T Consensus 13 ~~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 13 KHYCIK-GRCRFVVAEQTPSCVCDEGYIGARCERV 46 (50)
T ss_dssp TTSCTT-CCEEEETTTTEEEECCCTTEETTTTCEE
T ss_pred cCcccC-CEEEeEcCCCCeEEECCCCcccCCCCee
Confidence 589999 7997 4447899999999999999975
No 109
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.09 E-value=7.8e-05 Score=77.72 Aligned_cols=42 Identities=31% Similarity=0.801 Sum_probs=32.8
Q ss_pred ceee-cCCCCCCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCcccc
Q psy5025 35 IKGR-SKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 35 ~~G~-~~~C~~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~ 81 (533)
..|+ +..|+.+.|.. +|+| |+|++. +.|.|++||+|..|+..
T Consensus 382 ~~~~~g~~c~~~~C~~-~C~n-G~C~~~---~~C~C~~G~~G~~C~~~ 424 (463)
T 2wg3_C 382 RATVQPAQTLTSECSR-LCRN-GYCTPT---GKCCCSPGWEGDFCRTA 424 (463)
T ss_dssp CCCCCCCCCCCCHHHH-HCCS-EEECTT---SCEEECTTEESTTSCEE
T ss_pred CCCCcCCCCccccccC-CCCC-CccCCC---CeECCCCCcCCCcCCcC
Confidence 4566 77888888876 6988 799863 48999999999999753
No 110
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=97.08 E-value=8.4e-05 Score=67.50 Aligned_cols=51 Identities=27% Similarity=0.508 Sum_probs=41.3
Q ss_pred ceee-cC---CCC-CCCCC----CCCCCCCCeeeeCC-----CCceecCCCCCCCCCcccccccc
Q psy5025 35 IKGR-SK---ECL-EDKCN----KTPCEHGGKCITTP-----GSSYCLCPLGFTGDLCQTRLDLQ 85 (533)
Q Consensus 35 ~~G~-~~---~C~-~d~C~----~~pC~NggtC~~~~-----~~y~C~C~~g~~G~~Ce~~~~~~ 85 (533)
..|| +. .|+ +++|. .+||+|+|+|++.. ++|+|.|++||+|..|+-.++.|
T Consensus 30 ~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C 94 (186)
T 1z1y_A 30 NEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVC 94 (186)
T ss_dssp CTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGG
T ss_pred CCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcC
Confidence 5677 44 787 79999 78999999999999 89999999999998654334433
No 111
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=97.06 E-value=0.00017 Score=62.48 Aligned_cols=40 Identities=28% Similarity=0.637 Sum_probs=35.4
Q ss_pred CCC-CCCCCC--CCCCCCCeeeeCCCCceecCCCCCCCCCccc
Q psy5025 41 ECL-EDKCNK--TPCEHGGKCITTPGSSYCLCPLGFTGDLCQT 80 (533)
Q Consensus 41 ~C~-~d~C~~--~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~ 80 (533)
.|+ +|+|.. +||.++++|++..++|+|.|++||+|..+..
T Consensus 92 ~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~ 134 (143)
T 2bou_A 92 TCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIP 134 (143)
T ss_dssp CEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCC
T ss_pred CcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCc
Confidence 566 788984 8999999999999999999999999987654
No 112
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=97.03 E-value=0.00019 Score=62.13 Aligned_cols=41 Identities=24% Similarity=0.560 Sum_probs=36.0
Q ss_pred CCCC-CCCCCCC---CCCCCCeeeeCCCCceecCCCCCCCCCccc
Q psy5025 40 KECL-EDKCNKT---PCEHGGKCITTPGSSYCLCPLGFTGDLCQT 80 (533)
Q Consensus 40 ~~C~-~d~C~~~---pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~ 80 (533)
..|+ +|+|... ||.++++|++..++|+|.|++||+|..|+.
T Consensus 39 ~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~ 83 (143)
T 2bou_A 39 ETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAK 83 (143)
T ss_dssp CCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCS
T ss_pred CcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCcc
Confidence 5786 8999875 999999999999999999999999987664
No 113
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=97.00 E-value=0.00021 Score=62.20 Aligned_cols=35 Identities=37% Similarity=0.766 Sum_probs=31.6
Q ss_pred CCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCcc
Q psy5025 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79 (533)
Q Consensus 44 ~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce 79 (533)
+|+|.++||.| |+|++..++|+|.|++||+|..|.
T Consensus 4 ideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~ 38 (147)
T 2w86_A 4 IDECESSPCIN-GVCKNSPGSFICECSSESTLDPTK 38 (147)
T ss_dssp CCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTS
T ss_pred CccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCC
Confidence 68999999998 699999999999999999987654
No 114
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=96.99 E-value=0.00024 Score=58.91 Aligned_cols=36 Identities=22% Similarity=0.718 Sum_probs=31.5
Q ss_pred CCCCCCC--------C-CCCeeeecCCceEEecCCCCCcCcccce
Q psy5025 261 HPCITQP--------C-GSGSCVPLYDGYKCVCTQSCKESHLTEV 296 (533)
Q Consensus 261 ~~C~~~p--------C-ngg~C~~~~~~~~C~C~~g~~G~~c~~~ 296 (533)
++|.++| | |+|+|++...+|+|.|++||.|..|+..
T Consensus 7 d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~ 51 (114)
T 1aut_L 7 DQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQRE 51 (114)
T ss_dssp -CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEE
T ss_pred ccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcC
Confidence 4677777 9 9999999999999999999999998764
No 115
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=96.96 E-value=0.00012 Score=66.59 Aligned_cols=36 Identities=25% Similarity=0.656 Sum_probs=0.0
Q ss_pred CCCCCCCCC-CCCeeeecCCceEEecCCCCCcCcccc
Q psy5025 260 AHPCITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTE 295 (533)
Q Consensus 260 ~~~C~~~pC-ngg~C~~~~~~~~C~C~~g~~G~~c~~ 295 (533)
.+.|.++|| |+|+|++...+|.|.|++||.|..|+.
T Consensus 42 ideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~ 78 (195)
T 1nfu_B 42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCEL 78 (195)
T ss_dssp -------------------------------------
T ss_pred CcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccc
Confidence 368999999 999999999999999999999999975
No 116
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=96.95 E-value=0.012 Score=64.04 Aligned_cols=136 Identities=14% Similarity=0.145 Sum_probs=89.6
Q ss_pred ceeeEEEEEEEeCCCC--eEEEEeccCCC---CCeEEEEEE-CCEEEEEEEcCCc--eEEEeeCceeec---CC--CeEE
Q psy5025 336 GYEFNIDMRIKTSSSS--GLILWTGSSQS---KDFLALGIH-NGYAHVMYNLGNG--EVLLENNQTKIN---NG--VWHR 402 (533)
Q Consensus 336 ~~~~~i~~~~rt~~~~--g~ll~~~~~~~---~~~l~l~l~-~g~l~~~~~~g~~--~~~~~~~~~~~~---dg--~wH~ 402 (533)
....+|.|+|++...+ -.||.+.+... ..|+.|+|. +|.+.+.++-..+ ..... ....+. .| .|++
T Consensus 56 ~~~~T~~~~~~~~~~~~~~~lfs~sn~~~~~~~~~~~~~i~~~g~~~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 134 (686)
T 2jkb_A 56 GESQTVVMKFKADKPNSLQALFGLSNSKAGFKNNYFSIFMRDSGEIGVEIRDAQKGINYLFS-RPASLWGKHKGQAVENT 134 (686)
T ss_dssp SSCEEEEEEEECSSCCSEEEEEEEECCSTTCTTCEEEEEEETTSCEEEEEEETTTTEEEEEE-ESSCCCCEETTEECCEE
T ss_pred cCceEEEEEEEccCCCCeeEEEEeecCcccccCcceEEEEcCCCeEEEEEecCCCCeeeecc-ccccccccccCCcceeE
Confidence 3568999999997644 35666544321 478999997 8888888765433 22222 233344 45 7999
Q ss_pred EEEEEeeeeeecCCcccccCCcchhhhhhhhhcccccc--CcEEEEEECCceeeeEecCCc--ceeeccCCceEEcCCCC
Q psy5025 403 LTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRT--GKQCLIRIDTDYSMQSISGGK--FEQLNTDSGLYVGGVED 478 (533)
Q Consensus 403 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~vD~~~~~~~~~~~~--~~~l~~~~~l~lGg~~~ 478 (533)
|.+.. + .+.+.|+|||..+.+...... ...++.-..+-||++..
T Consensus 135 va~~~--------------------------------d~~~~~~~lyvnG~~v~~~~~~~~~~~~~~~~~~~~~iG~~~~ 182 (686)
T 2jkb_A 135 LVFVS--------------------------------DSKDKTYTMYVNGIEVFSETVDTFLPISNINGIDKATLGAVNR 182 (686)
T ss_dssp EEEEE--------------------------------ETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEE
T ss_pred EEEEE--------------------------------ECCCCeEEEEECCEEEEeecccccceeccCCCcceeeeccccc
Confidence 99999 5 679999999999888654321 12233334688998533
Q ss_pred cccccccccccCceeeEEEEEEcCceEEeecc
Q psy5025 479 IEELTRSKYHHSFKGWISNLILSNDYQVKLPL 510 (533)
Q Consensus 479 ~~~~~~~~~~~~f~GCi~~l~i~~~~~l~~~~ 510 (533)
... ..-.|+|=|.+++| -++.|...+
T Consensus 183 ~g~-----~~~~f~G~id~~~i-y~~~Ls~~e 208 (686)
T 2jkb_A 183 EGK-----EHYLAKGSIDEISL-FNKAISDQE 208 (686)
T ss_dssp TTE-----EESCCEEEEEEEEE-ESSCCCHHH
T ss_pred CCc-----ccccccceEeEEEE-ecCCCCHHH
Confidence 211 12259999999999 666665544
No 117
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=96.94 E-value=0.00018 Score=56.46 Aligned_cols=42 Identities=31% Similarity=0.668 Sum_probs=35.9
Q ss_pred cCCCC-CCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCcccccc
Q psy5025 39 SKECL-EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83 (533)
Q Consensus 39 ~~~C~-~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~~~ 83 (533)
+..|+ +++|..+||+ ++|++..++|.|.|+ ++.|..|+.+..
T Consensus 39 g~~C~dideC~~~~C~--~~C~n~~g~y~C~C~-g~~G~~~~~~~~ 81 (87)
T 1z6c_A 39 SKSCEDIDECSENMCA--QLCVNYPGGYTCYCD-GKKGFKLAQDQK 81 (87)
T ss_dssp TTEEECCCHHHHSCCS--SEECCCSSSCCEECC-SSSCCBCCTTSS
T ss_pred CCcCCCcCeeCCCCCC--CEEEccCCCEEEECC-CCcCCcccCCCC
Confidence 46776 7899999997 799999999999999 888888877643
No 118
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=96.92 E-value=4.1e-05 Score=72.65 Aligned_cols=46 Identities=17% Similarity=0.198 Sum_probs=38.9
Q ss_pred cCCCCC-CCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCccccccc
Q psy5025 39 SKECLE-DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDL 84 (533)
Q Consensus 39 ~~~C~~-d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~~~~ 84 (533)
+.+|.. ..|.+.||+|+|+|++..++|+|.||+||+|..|+..++.
T Consensus 160 G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~~i~e 206 (267)
T 4fbr_A 160 GTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSPDTYT 206 (267)
T ss_dssp CSSTTSCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEEEETTEEE
T ss_pred ccccccccccCCCCCCCCCEeeCCCCCeEEeCCCCccccccccccce
Confidence 556663 3466789999999999999999999999999999988754
No 119
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.91 E-value=0.00029 Score=57.59 Aligned_cols=52 Identities=21% Similarity=0.328 Sum_probs=35.0
Q ss_pred CCCceee-cCCCCCCCCCCC--CCCCCCeeeeCCCCceecCCCCCCC---CCccccccccc
Q psy5025 32 GNKIKGR-SKECLEDKCNKT--PCEHGGKCITTPGSSYCLCPLGFTG---DLCQTRLDLQV 86 (533)
Q Consensus 32 ~~~~~G~-~~~C~~d~C~~~--pC~NggtC~~~~~~y~C~C~~g~~G---~~Ce~~~~~~~ 86 (533)
.....|| +..|.+++|..+ +|. .+|++..++|.|.|++||+| ..|+ ++++|.
T Consensus 16 ~~~~~~~~~~~Cd~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~-dideC~ 73 (107)
T 2w2n_E 16 PTTENLYFQGAMGTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQ 73 (107)
T ss_dssp ----CCCCSCCBSCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEE-C-----
T ss_pred cccCCCcCCCCCcCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccc-cccccC
Confidence 3335566 677777777643 564 59999999999999999988 8898 666664
No 120
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=96.91 E-value=0.00045 Score=73.88 Aligned_cols=45 Identities=29% Similarity=0.651 Sum_probs=40.5
Q ss_pred ceee---cCCCC-CCCCCCCC--CCCCC---eeeeCCCCceec-CCCCCCCCCcc
Q psy5025 35 IKGR---SKECL-EDKCNKTP--CEHGG---KCITTPGSSYCL-CPLGFTGDLCQ 79 (533)
Q Consensus 35 ~~G~---~~~C~-~d~C~~~p--C~Ngg---tC~~~~~~y~C~-C~~g~~G~~Ce 79 (533)
+.|| +..|+ +++|..+| |.+++ +|++..++|+|. |++||+|..|+
T Consensus 31 ~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~ 85 (634)
T 1yo8_A 31 PVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPV 85 (634)
T ss_dssp CTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCE
T ss_pred CCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccc
Confidence 5677 37898 89999888 99999 999999999999 99999999876
No 121
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=96.85 E-value=0.00027 Score=55.30 Aligned_cols=37 Identities=43% Similarity=1.000 Sum_probs=31.6
Q ss_pred cCCCC-CCCCCCCC--CCCCCeeeeCCCCceecCCCCCCCC
Q psy5025 39 SKECL-EDKCNKTP--CEHGGKCITTPGSSYCLCPLGFTGD 76 (533)
Q Consensus 39 ~~~C~-~d~C~~~p--C~NggtC~~~~~~y~C~C~~g~~G~ 76 (533)
+..|+ +|+|..+| |. +++|++..++|+|.|++||+|.
T Consensus 40 g~~C~dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 40 MKNCMDIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLS 79 (86)
T ss_dssp SSSEEECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCC
T ss_pred CCccCCcccccCCCCcCC-CCEeEcCCCCEEEECcCCcccC
Confidence 46677 89998777 65 5899999999999999999875
No 122
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=96.84 E-value=0.00017 Score=61.66 Aligned_cols=36 Identities=25% Similarity=0.656 Sum_probs=0.0
Q ss_pred CCCCCCCCC-CCCeeeecCCceEEecCCCCCcCcccc
Q psy5025 260 AHPCITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTE 295 (533)
Q Consensus 260 ~~~C~~~pC-ngg~C~~~~~~~~C~C~~g~~G~~c~~ 295 (533)
.+.|.++|| |+|+|++...+|+|.|++||.|..|+.
T Consensus 42 ~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~ 78 (134)
T 2vh0_B 42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCEL 78 (134)
T ss_dssp -------------------------------------
T ss_pred cCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCcccc
Confidence 368999999 999999999999999999999999876
No 123
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=96.84 E-value=0.015 Score=63.17 Aligned_cols=137 Identities=16% Similarity=0.232 Sum_probs=87.7
Q ss_pred ceeeEEEEEEEeCCCCe--EEEEeccCC---CCCeEEEEEE-CCEEEEEEEcCCc-eEEEeeCceeec---CC--CeEEE
Q psy5025 336 GYEFNIDMRIKTSSSSG--LILWTGSSQ---SKDFLALGIH-NGYAHVMYNLGNG-EVLLENNQTKIN---NG--VWHRL 403 (533)
Q Consensus 336 ~~~~~i~~~~rt~~~~g--~ll~~~~~~---~~~~l~l~l~-~g~l~~~~~~g~~-~~~~~~~~~~~~---dg--~wH~v 403 (533)
...++|.|+||+...++ .||.+.+.. ...||.|+|. +|.+.+.+....+ ..........+. .| .|++|
T Consensus 34 l~~~Ti~~~~~~~~~~~~~~lfs~s~~~~~~~~~~~~~~i~~~g~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 113 (679)
T 2sli_A 34 MTQGTIILSYKSTSENGIQSLFSVGNSTAGNQDRHFHIYITNSGGIGIELRNTDGVFNYTLDRPASVRALYKGERVFNTV 113 (679)
T ss_dssp CSSEEEEEEEEECCCCSEEEEEEEECCSTTCTTEEEEEEEETTSCEEEEEEECTTTCEEEEEESSCCCSEETTEECCEEE
T ss_pred ccCeEEEEEEEcCCCCCceEEEEeecCCccccCcceEEEEcCCCeEEEEEecCCCCeeeecccccccccccCCCceeEEE
Confidence 45789999999986553 466655432 1479999998 5788777655433 222221233343 35 69999
Q ss_pred EEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEecCC-cc-eeeccCCceEEcCCCCccc
Q psy5025 404 TVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGG-KF-EQLNTDSGLYVGGVEDIEE 481 (533)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~~~-~~-~~l~~~~~l~lGg~~~~~~ 481 (533)
.+...+ ..+.+.|+|||..+.+..... .+ ..+..-..+.||+.....
T Consensus 114 a~~~~~------------------------------~~~~~~lyvnG~~v~~~~~~~~~f~~~~~~~~~~~iG~~~~~g- 162 (679)
T 2sli_A 114 ALKADA------------------------------ANKQCRLFANGELLATLDKDAFKFISDITGVDNVTLGGTKRQG- 162 (679)
T ss_dssp EEEEET------------------------------TTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEETT-
T ss_pred EEEEEC------------------------------CCCeEEEEECCEEeEeecccccccccccCCCceEEEeeeecCC-
Confidence 999821 368999999999988865432 11 223333569999953221
Q ss_pred ccccccccCceeeEEEEEEcCceEEee
Q psy5025 482 LTRSKYHHSFKGWISNLILSNDYQVKL 508 (533)
Q Consensus 482 ~~~~~~~~~f~GCi~~l~i~~~~~l~~ 508 (533)
...-.|+|=|.+++| -.+.|..
T Consensus 163 ----~~~~~f~G~i~~~~i-y~~~Ls~ 184 (679)
T 2sli_A 163 ----KIAYPFGGTIGDIKV-YSNALSD 184 (679)
T ss_dssp ----EEESCCCEEEEEEEE-ESSCCCH
T ss_pred ----ceeccccceEeEEEE-eCCCCCH
Confidence 112259999999999 5566643
No 124
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=96.80 E-value=0.00044 Score=60.65 Aligned_cols=36 Identities=25% Similarity=0.746 Sum_probs=33.4
Q ss_pred CCCCCCCC-CCCeeeecCCceEEecCCCCCcCcccce
Q psy5025 261 HPCITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEV 296 (533)
Q Consensus 261 ~~C~~~pC-ngg~C~~~~~~~~C~C~~g~~G~~c~~~ 296 (533)
++|.++|| ++|.|.+.|..|.|.|.++|.|..|+..
T Consensus 120 ~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 120 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence 57889999 9999999999999999999999999853
No 125
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.77 E-value=0.00078 Score=47.21 Aligned_cols=30 Identities=27% Similarity=0.724 Sum_probs=25.5
Q ss_pred CCCCCC----------CCCCCCCeeeeCCCCceecCCCCCCC
Q psy5025 44 EDKCNK----------TPCEHGGKCITTPGSSYCLCPLGFTG 75 (533)
Q Consensus 44 ~d~C~~----------~pC~NggtC~~~~~~y~C~C~~g~~G 75 (533)
+|+|.. .||+ ++|++..++|.|.|++||.+
T Consensus 4 idEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~ 43 (53)
T 1apq_A 4 LDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYEL 43 (53)
T ss_dssp CCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEE
T ss_pred cccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeE
Confidence 577764 6897 49999999999999999964
No 126
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=96.77 E-value=0.00024 Score=61.81 Aligned_cols=42 Identities=40% Similarity=0.793 Sum_probs=35.1
Q ss_pred ceee----cCCCC-CCCCCCC--CCCCCCeeeeCCCCceecCCCCCCCCC
Q psy5025 35 IKGR----SKECL-EDKCNKT--PCEHGGKCITTPGSSYCLCPLGFTGDL 77 (533)
Q Consensus 35 ~~G~----~~~C~-~d~C~~~--pC~NggtC~~~~~~y~C~C~~g~~G~~ 77 (533)
..|| +..|+ +|+|..+ +|+|+ +|++..++|+|.|++||+|..
T Consensus 93 ~~Gy~~~~g~~C~dideC~~~~~~C~~g-~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 93 GKGYSRIKGTQCEDIDECEVFPGVCKNG-LCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp CTTEEEEETTEEEECCHHHHSTTCSSSS-EEEEETTEEEEECCTTCCBCT
T ss_pred CCccccCCCCccCccccccCCCCCCCCC-EEECCCCCEEeeCCCCCccCC
Confidence 5677 67887 8999854 49985 999999999999999998753
No 127
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=96.61 E-value=0.0006 Score=51.51 Aligned_cols=34 Identities=18% Similarity=0.562 Sum_probs=27.2
Q ss_pred CCCC---CCCC-CCCeee--ecCCceEEecCCCCCcCcccc
Q psy5025 261 HPCI---TQPC-GSGSCV--PLYDGYKCVCTQSCKESHLTE 295 (533)
Q Consensus 261 ~~C~---~~pC-ngg~C~--~~~~~~~C~C~~g~~G~~c~~ 295 (533)
++|. .++| || +|. .....+.|.|+++|.|++|+.
T Consensus 38 ~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 38 DPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp -CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEESTTCCE
T ss_pred CCCCccccCcCCCC-EeeeecCCCCeEEEcCCCcccccccc
Confidence 4666 6899 86 995 444689999999999999975
No 128
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=96.60 E-value=0.00068 Score=66.98 Aligned_cols=34 Identities=41% Similarity=0.947 Sum_probs=32.1
Q ss_pred CCCCCCCC-CCCeeeecCCceEEecCCCCCcCccc
Q psy5025 261 HPCITQPC-GSGSCVPLYDGYKCVCTQSCKESHLT 294 (533)
Q Consensus 261 ~~C~~~pC-ngg~C~~~~~~~~C~C~~g~~G~~c~ 294 (533)
++|.++|| |+|+|++...+|.|.|++||.|..|+
T Consensus 6 ~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~ 40 (317)
T 3h5c_B 6 SPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCE 40 (317)
T ss_dssp CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSC
T ss_pred CcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccc
Confidence 67999999 99999999999999999999999987
No 129
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=96.59 E-value=0.00048 Score=62.41 Aligned_cols=47 Identities=28% Similarity=0.555 Sum_probs=40.4
Q ss_pred ceee-c-----CCCC---CCCCCCCCC-CCCCeeeeCCCCceecCCCCCCCCCccccc
Q psy5025 35 IKGR-S-----KECL---EDKCNKTPC-EHGGKCITTPGSSYCLCPLGFTGDLCQTRL 82 (533)
Q Consensus 35 ~~G~-~-----~~C~---~d~C~~~pC-~NggtC~~~~~~y~C~C~~g~~G~~Ce~~~ 82 (533)
..|| + ..|+ +++|. +|| +++++|++..++|+|.|++||+|..|+...
T Consensus 121 ~~Gy~g~~~~~~~C~~~~~~~C~-~~C~~~~~~C~n~~g~y~C~C~~G~~g~~~~~~~ 177 (186)
T 1z1y_A 121 AIGXVPNPEDEXXCTXTGETACQ-LXCNTDNEVCXNVEGVYXCQCMEGFTFDXEXNVC 177 (186)
T ss_dssp CTEEEEETTTTTEEEEEECCCCC-CCCCTTTEEEEEETTEEEEEECTTCEEETTTTEE
T ss_pred CCCCcccCCCCCcceEcCCCccc-ccccccCcceecCCCCeeeECCCCCccCcccccC
Confidence 5577 5 6787 37898 499 999999999999999999999999998764
No 130
>1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A*
Probab=96.58 E-value=0.069 Score=53.37 Aligned_cols=131 Identities=10% Similarity=0.072 Sum_probs=81.3
Q ss_pred eeeEEEEEEEeCCCC---------e--EEEEec-cCC--CCCeEEEEEECCEEEEEEEcCCc-eEEEee--Cceeec---
Q psy5025 337 YEFNIDMRIKTSSSS---------G--LILWTG-SSQ--SKDFLALGIHNGYAHVMYNLGNG-EVLLEN--NQTKIN--- 396 (533)
Q Consensus 337 ~~~~i~~~~rt~~~~---------g--~ll~~~-~~~--~~~~l~l~l~~g~l~~~~~~g~~-~~~~~~--~~~~~~--- 396 (533)
..|+|+|++|+.+.+ + .|+-.- ... ...-..++|.++.+.+.+...++ ...+.+ ....+.
T Consensus 85 ~dFSISFWvK~~k~~~~~i~~~~~~e~TIin~k~~n~~s~nsGW~I~l~gn~liw~l~Dsng~~~~i~f~~~~~~Isd~~ 164 (452)
T 1a8d_A 85 NNFTVSFWLRVPKVSASHLEQYGTNEYSIISSMKKHSLSIGSGWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYL 164 (452)
T ss_dssp SCEEEEEEEECCCCCHHHHHHHTTCEEEEEECCEECGGGCEEEEEEEEETTEEEEEEECTTSCEEEEEEECCSBTTSCSS
T ss_pred CceEEEEEEECCCcCcccccccccCcceEEeeeccccccCCCCeEEEeCCCeEEEEEEcCCCceeeEEeccccccCcccc
Confidence 479999999998742 2 444221 110 02246678888888888876443 222222 234455
Q ss_pred CCCeEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEecCCcceeeccCCceEEc--
Q psy5025 397 NGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVG-- 474 (533)
Q Consensus 397 dg~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~lG-- 474 (533)
||+||+|+++.. |. +...++|||..+.+...... -.+.....+-||
T Consensus 165 ~nkW~fVtItvD------------------------------R~-g~~~IYING~Lv~s~~It~l-G~I~ss~~i~~gi~ 212 (452)
T 1a8d_A 165 ANKWVFITITND------------------------------RL-SSANLYINGVLMGSAEITGL-GAIREDNNITLKLD 212 (452)
T ss_dssp SSSCEEEEEEEC------------------------------TT-SEEEEEETTEEEEEEECTTC-CCCCCCSEEEEEEE
T ss_pred CCeEEEEEEEEC------------------------------CC-CCEEEEECCEEeeccchhhc-cceeecCeEEEEEc
Confidence 699999999992 13 44499999998877644322 233344444455
Q ss_pred CCCCcccccccccccCceeeEEEEEEcCceEEeecc
Q psy5025 475 GVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLPL 510 (533)
Q Consensus 475 g~~~~~~~~~~~~~~~f~GCi~~l~i~~~~~l~~~~ 510 (533)
+.+. .++.|+|.+++| =.++|+-.+
T Consensus 213 ~~~d----------~~~~~~IDef~I-ynk~Lt~~E 237 (452)
T 1a8d_A 213 RCNN----------NNQYVSIDKFRI-FCKALNPKE 237 (452)
T ss_dssp SCCC----------TTCEEEEEEEEE-ESSCCCHHH
T ss_pred ccCC----------CcccceEeeEEE-ecccCCHHH
Confidence 5444 357789999999 566665443
No 131
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=96.44 E-value=0.0011 Score=58.59 Aligned_cols=35 Identities=40% Similarity=0.885 Sum_probs=31.8
Q ss_pred CCCCC-CCCCCCCCeeeeCCCCceecCCCCCC----CCCcc
Q psy5025 44 EDKCN-KTPCEHGGKCITTPGSSYCLCPLGFT----GDLCQ 79 (533)
Q Consensus 44 ~d~C~-~~pC~NggtC~~~~~~y~C~C~~g~~----G~~Ce 79 (533)
+|+|. ++||. +|+|++..++|+|.|++||+ |+.|+
T Consensus 3 ideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~ 42 (162)
T 1uzk_A 3 VNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV 42 (162)
T ss_dssp CCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEE
T ss_pred cccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCccc
Confidence 68898 59997 58999999999999999998 88998
No 132
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.44 E-value=0.0012 Score=67.49 Aligned_cols=41 Identities=24% Similarity=0.470 Sum_probs=36.3
Q ss_pred CCCCCCCCCCCCeeeeCCCCceecCCCCCC---CCCccccccccc
Q psy5025 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFT---GDLCQTRLDLQV 86 (533)
Q Consensus 45 d~C~~~pC~NggtC~~~~~~y~C~C~~g~~---G~~Ce~~~~~~~ 86 (533)
|+|..+||.++++|++..++|.|.|++||. |..|+ ++++|.
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~-dideC~ 44 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQ 44 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEE-ECCCCS
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCccc-Cchhhh
Confidence 579999999999999999999999999997 89996 566664
No 133
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=96.41 E-value=0.0023 Score=44.00 Aligned_cols=29 Identities=24% Similarity=0.516 Sum_probs=24.9
Q ss_pred CCC-CCCeee--ecCCceEEecCCCCCcCcccc
Q psy5025 266 QPC-GSGSCV--PLYDGYKCVCTQSCKESHLTE 295 (533)
Q Consensus 266 ~pC-ngg~C~--~~~~~~~C~C~~g~~G~~c~~ 295 (533)
+.| | |+|. ...+.+.|.|+.+|.|++|+.
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 789 7 4997 556789999999999999974
No 134
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=96.40 E-value=0.0021 Score=44.23 Aligned_cols=31 Identities=26% Similarity=0.423 Sum_probs=26.2
Q ss_pred CCCC-CCCeeee--cCCceEEecCCCCCcCcccce
Q psy5025 265 TQPC-GSGSCVP--LYDGYKCVCTQSCKESHLTEV 296 (533)
Q Consensus 265 ~~pC-ngg~C~~--~~~~~~C~C~~g~~G~~c~~~ 296 (533)
.+.| || +|.- ..+.+.|.|++||.|++|+..
T Consensus 13 ~~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 3e50_C 13 TQFCFHG-TCRFLVQEDKPACVCHSGYVGARCEHA 46 (50)
T ss_pred cCcccCC-EEeeccCCCCeEEECCCCCcccCCCce
Confidence 5789 87 9984 457899999999999999853
No 135
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=96.38 E-value=0.0011 Score=55.22 Aligned_cols=33 Identities=30% Similarity=0.630 Sum_probs=29.9
Q ss_pred CCCCCCCCCCCCCeeeeC-CCCceecCCCCCCCCCc
Q psy5025 44 EDKCNKTPCEHGGKCITT-PGSSYCLCPLGFTGDLC 78 (533)
Q Consensus 44 ~d~C~~~pC~NggtC~~~-~~~y~C~C~~g~~G~~C 78 (533)
+|+|.++||++ +|++. .++|+|.|++||+|..+
T Consensus 4 ideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~ 37 (118)
T 1dx5_I 4 VDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPH 37 (118)
T ss_dssp CCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETT
T ss_pred cccCCCCCCCC--CCCCCCCCCEEeECCCCccccCC
Confidence 68999999985 99999 89999999999999754
No 136
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=96.33 E-value=0.0024 Score=56.39 Aligned_cols=36 Identities=28% Similarity=0.691 Sum_probs=33.0
Q ss_pred CCCCCCCC-CCCeeeecCCceEEecCCCCCcCcccce
Q psy5025 261 HPCITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEV 296 (533)
Q Consensus 261 ~~C~~~pC-ngg~C~~~~~~~~C~C~~g~~G~~c~~~ 296 (533)
.+|.+++| ++|+|++.+.+|.|.|++||.|..|+..
T Consensus 120 ~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~ 156 (164)
T 3cfw_A 120 ASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQFV 156 (164)
T ss_dssp CCCCTTSSCSSEEEEEETTEEEEEECTTCBSSSSCBC
T ss_pred CCCCCCcCCCCCeecccCCCceeeeCCCccccccccc
Confidence 46888999 9999999999999999999999999853
No 137
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=96.19 E-value=0.0022 Score=44.26 Aligned_cols=31 Identities=23% Similarity=0.480 Sum_probs=26.1
Q ss_pred CCCC-CCCeee--ecCCceEEecCCCCCcCcccce
Q psy5025 265 TQPC-GSGSCV--PLYDGYKCVCTQSCKESHLTEV 296 (533)
Q Consensus 265 ~~pC-ngg~C~--~~~~~~~C~C~~g~~G~~c~~~ 296 (533)
.+.| | |+|. .....+.|.|++||.|++|+..
T Consensus 13 ~~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 13 KHYCIK-GRCRFVVAEQTPSCVCDEGYIGARCERV 46 (50)
T ss_dssp TTSCTT-CCEEEETTTTEEEECCCTTEETTTTCEE
T ss_pred cCcccC-CEEEeEcCCCCeEEECCCCcccCCCCee
Confidence 4889 8 7996 4456799999999999999864
No 138
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=96.10 E-value=0.0026 Score=62.87 Aligned_cols=39 Identities=36% Similarity=0.897 Sum_probs=29.7
Q ss_pred cCCCCCCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCcccc
Q psy5025 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 39 ~~~C~~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~ 81 (533)
+..|..+.|. ++|.|+|+|.+ .+.|.|++||+|+.|+..
T Consensus 143 ~~~C~~~~C~-~~C~~~G~C~~---~~~C~C~~G~~G~~C~~~ 181 (324)
T 2ygq_A 143 FKTCQQAECP-GGCRNGGFCNE---RRICECPDGFHGPHCEKA 181 (324)
T ss_dssp EEEECCCCCS-SCCCSSCEECT---TSCEECCTTEESSSSCEE
T ss_pred cccccCCCCC-CCCCCCCEECC---CCeEECCCCCcCCCCCCC
Confidence 5566666774 68888888875 478888888888888864
No 139
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=96.06 E-value=0.0027 Score=62.80 Aligned_cols=43 Identities=35% Similarity=0.927 Sum_probs=38.3
Q ss_pred ceee-cCCCCCCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCcccc
Q psy5025 35 IKGR-SKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 35 ~~G~-~~~C~~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~ 81 (533)
..|| +..|+.+.|.+ +|.|+|+|+. .+.|.|++||+|..|+..
T Consensus 170 ~~G~~G~~C~~~~C~~-~C~~~G~C~~---~~~C~C~~G~~G~~C~~~ 213 (324)
T 2ygq_A 170 PDGFHGPHCEKALCTP-RCMNGGLCVT---PGFCICPPGFYGVNCDKA 213 (324)
T ss_dssp CTTEESSSSCEESSSS-CCCTTCEECS---SCCEECCTTCBTTTTCBC
T ss_pred CCCCcCCCCCCCCCCC-CCCCCCEEcC---CCEEeCCCCccCCCcccC
Confidence 7889 99999888975 8999999986 589999999999999974
No 140
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.04 E-value=0.0029 Score=52.90 Aligned_cols=30 Identities=23% Similarity=0.505 Sum_probs=26.3
Q ss_pred CC-CCCeeeecC--Cce-EEecCCCCCcCcccce
Q psy5025 267 PC-GSGSCVPLY--DGY-KCVCTQSCKESHLTEV 296 (533)
Q Consensus 267 pC-ngg~C~~~~--~~~-~C~C~~g~~G~~c~~~ 296 (533)
|| |||+|++.. .+| +|.|+++|.|..|+..
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~ 35 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID 35 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEE
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCcccccc
Confidence 89 999999874 666 9999999999999853
No 141
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=95.99 E-value=0.0014 Score=62.51 Aligned_cols=37 Identities=22% Similarity=0.637 Sum_probs=31.5
Q ss_pred CCCCC--CCCCCCCCeeeeCCCCceecCCCCCC--CCCccc
Q psy5025 44 EDKCN--KTPCEHGGKCITTPGSSYCLCPLGFT--GDLCQT 80 (533)
Q Consensus 44 ~d~C~--~~pC~NggtC~~~~~~y~C~C~~g~~--G~~Ce~ 80 (533)
+|+|. .++|..+++|++..++|.|.|+.||. |..|..
T Consensus 5 iDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~d 45 (285)
T 1gl4_A 5 QQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCVA 45 (285)
T ss_dssp --CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEEE
T ss_pred chhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCCC
Confidence 68897 68999999999999999999999997 677865
No 142
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=95.91 E-value=0.00094 Score=54.56 Aligned_cols=40 Identities=30% Similarity=0.690 Sum_probs=6.1
Q ss_pred ceee-c---CCCC-CCCCC-CCCCCCCCeeeeCCCCceecCCCCCCCC
Q psy5025 35 IKGR-S---KECL-EDKCN-KTPCEHGGKCITTPGSSYCLCPLGFTGD 76 (533)
Q Consensus 35 ~~G~-~---~~C~-~d~C~-~~pC~NggtC~~~~~~y~C~C~~g~~G~ 76 (533)
+.|| + ..|+ +|+|. ++||. ++|++..++|.|.|++||.|.
T Consensus 55 ~~Gy~g~~g~~C~dideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 55 PDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 100 (107)
T ss_dssp CTTCEEETTTEEEC----------------------------------
T ss_pred CCCccccCCCccccccccCCCCCcC--CeeecCCCCEEEECCCCceEC
Confidence 5677 4 6787 78998 48997 799999999999999999864
No 143
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=95.85 E-value=0.0015 Score=54.35 Aligned_cols=30 Identities=30% Similarity=0.694 Sum_probs=14.2
Q ss_pred CCCCCC-CCCCCCCeeeeCCCCceecCCCCCCC
Q psy5025 44 EDKCNK-TPCEHGGKCITTPGSSYCLCPLGFTG 75 (533)
Q Consensus 44 ~d~C~~-~pC~NggtC~~~~~~y~C~C~~g~~G 75 (533)
+|+|.. +|| +++|++..++|.|.|++||+|
T Consensus 80 ideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g 110 (118)
T 1dx5_I 80 IDECENGGFC--SGVCHNLPGTFECICGPDSAL 110 (118)
T ss_dssp CCHHHHCSSC--SSEEEECSSSEEEEECSSSSC
T ss_pred ccccCCCCCC--cCeEEeCCCCEEEECCCCCcc
Confidence 444443 444 344554444455555544443
No 144
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=95.69 E-value=0.004 Score=46.51 Aligned_cols=31 Identities=26% Similarity=0.522 Sum_probs=25.5
Q ss_pred CCCCCC--CCCCCCCeeeeCCCCceecCC-CCCC
Q psy5025 44 EDKCNK--TPCEHGGKCITTPGSSYCLCP-LGFT 74 (533)
Q Consensus 44 ~d~C~~--~pC~NggtC~~~~~~y~C~C~-~g~~ 74 (533)
+|+|.. ++|.++++|+++.++|+|.|. .||.
T Consensus 3 idEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~ 36 (71)
T 2kl7_A 3 VNECLTIPEACKGEMKCINHYGGYLCLPRSAAVI 36 (71)
T ss_dssp SCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCC
T ss_pred cccccCCCCCCCCCCEeECCCCCeEecccCCccc
Confidence 678874 789999999999999999943 4664
No 145
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=95.54 E-value=0.22 Score=44.54 Aligned_cols=87 Identities=11% Similarity=0.189 Sum_probs=55.8
Q ss_pred eeEEEEEEEeCC-----CCeEEEEeccCCCCCeEEEEEEC--CEEEEEEEcCCceEEEeeCceeecCCCeEEEEEEEeee
Q psy5025 338 EFNIDMRIKTSS-----SSGLILWTGSSQSKDFLALGIHN--GYAHVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFM 410 (533)
Q Consensus 338 ~~~i~~~~rt~~-----~~g~ll~~~~~~~~~~l~l~l~~--g~l~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~ 410 (533)
.+.+++.++... ..|++|... ....++..+.|.. +.+.+.-..++....+...+..+..|+||+++|..
T Consensus 65 Df~le~dvk~~~~~~~g~~Gi~fR~~-~d~~~gY~~~i~~~~~~~~l~k~~~g~~~~L~~~~~~~~~g~w~~l~I~~--- 140 (185)
T 4b1m_A 65 DFTYESDITIKDGNGRGAGALMFRSD-KDAKNGYLANVDAKHDLVKFFKFENGAASVIAEYKTPIDVNKKYHLKTEA--- 140 (185)
T ss_dssp SEEEEEEEEEEEEEEEEEEEEEEEEC-TTSSSEEEEEEETTTTEEEEEEEETTEEEEEEEEECCCCSSCCEEEEEEE---
T ss_pred CEEEEEEEEEcCCCCcceEEEEEEEc-CCCCCcEEEEEECCCCEEEEEEEeCCcEEEeeeccccCCCCCeEEEEEEE---
Confidence 345555555433 347777762 2335777888874 56555432333222232233568889999999999
Q ss_pred eeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEe
Q psy5025 411 VVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSI 457 (533)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~ 457 (533)
.+..++++||+..+....
T Consensus 141 -----------------------------~G~~i~~~vnG~~v~~~~ 158 (185)
T 4b1m_A 141 -----------------------------EGDRFKIYLDDRLVIDAH 158 (185)
T ss_dssp -----------------------------ETTEEEEEETTEEEEEEE
T ss_pred -----------------------------ECCEEEEEECCEEEEEEE
Confidence 999999999998766643
No 146
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=95.50 E-value=0.18 Score=54.80 Aligned_cols=153 Identities=14% Similarity=0.203 Sum_probs=94.5
Q ss_pred cccCCceeEEEcCCccc----ccceeEEEEEEEecCCCe--eEEEccccCCC-CCCeEEEEEEC-CEEEEEEEcCCCc--
Q psy5025 87 PQFNGSSYLRYQGLGEQ----YLSLLDLTIVFKAIEPNG--ILLYNGHRADG-VGDFIALYLND-RYVDFTFDLGTGA-- 156 (533)
Q Consensus 87 ~~F~g~syl~~~~~~~~----~~~~~~ls~~FrT~~~dG--lLl~~~~~~~~-~~~fl~l~L~~-G~l~~~~~~g~~~-- 156 (533)
..+++++.+.++.-... ....++|.++||+...++ .||-..+...+ ...|+.|+|.+ |++.+.+....+.
T Consensus 12 ~~~~~~~~~~l~~~~~~~~~~~l~~~Ti~~~~~~~~~~~~~~lfs~s~~~~~~~~~~~~~~i~~~g~~~~~~r~~~~~~~ 91 (679)
T 2sli_A 12 VDIAEGQGYSLDQEAGAKYVKAMTQGTIILSYKSTSENGIQSLFSVGNSTAGNQDRHFHIYITNSGGIGIELRNTDGVFN 91 (679)
T ss_dssp EEECTTTCEECTTSTTHHHHTTCSSEEEEEEEEECCCCSEEEEEEEECCSTTCTTEEEEEEEETTSCEEEEEEECTTTCE
T ss_pred EEecCCCceeCCHHHHHHhhccccCeEEEEEEEcCCCCCceEEEEeecCCccccCcceEEEEcCCCeEEEEEecCCCCee
Confidence 34566666676642211 135789999999976443 35444443211 25899999984 7888876654332
Q ss_pred eEEEeecccc---CC--CcEEEEEEEE--CCEEEEEEcCccCceeeCCCC--ceeeecCCCEEEcCcCCCCccCCCcccc
Q psy5025 157 ATLRSSNPIS---LG--EWHKLRLTRT--GRHAYLQVDRFPSSQILSPGP--FTQLSLSLSLYLGGVPDYNIVSPKVKIK 227 (533)
Q Consensus 157 ~~v~s~~~ln---Dg--~Wh~V~v~~~--~~~~~L~VD~~~~~~~~~~~~--~~~l~~~~~l~vGG~p~~~~~~~~~~~~ 227 (533)
..+..+..+. .| .|++|.+... ...+.|+|||....+...... ...+.-...+.||+...... ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~lyvnG~~v~~~~~~~~~f~~~~~~~~~~~iG~~~~~g~------~~ 165 (679)
T 2sli_A 92 YTLDRPASVRALYKGERVFNTVALKADAANKQCRLFANGELLATLDKDAFKFISDITGVDNVTLGGTKRQGK------IA 165 (679)
T ss_dssp EEEEESSCCCSEETTEECCEEEEEEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEETTE------EE
T ss_pred eecccccccccccCCCceeEEEEEEEECCCCeEEEEECCEEeEeecccccccccccCCCceEEEeeeecCCc------ee
Confidence 2222233333 24 7999999998 679999999977655443321 11122225789998532211 11
Q ss_pred cCceeeeeeEEECcEEcc
Q psy5025 228 SSFIGCIQKVLINNHELN 245 (533)
Q Consensus 228 ~~F~GCI~~l~in~~~l~ 245 (533)
-.|.|-|++++|-+.++.
T Consensus 166 ~~f~G~i~~~~iy~~~Ls 183 (679)
T 2sli_A 166 YPFGGTIGDIKVYSNALS 183 (679)
T ss_dssp SCCCEEEEEEEEESSCCC
T ss_pred ccccceEeEEEEeCCCCC
Confidence 359999999999888776
No 147
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=95.50 E-value=0.007 Score=52.12 Aligned_cols=30 Identities=23% Similarity=0.585 Sum_probs=26.0
Q ss_pred CC-CCCeeeec--CCce-EEecCCCCCcCcccce
Q psy5025 267 PC-GSGSCVPL--YDGY-KCVCTQSCKESHLTEV 296 (533)
Q Consensus 267 pC-ngg~C~~~--~~~~-~C~C~~g~~G~~c~~~ 296 (533)
|| |||+|+.. ...+ .|.|+++|.|..|+..
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~ 47 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID 47 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEE
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceecc
Confidence 89 99999876 3566 8999999999999754
No 148
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=95.33 E-value=0.0048 Score=54.37 Aligned_cols=36 Identities=39% Similarity=0.729 Sum_probs=30.3
Q ss_pred CCC-CCCCCC--CCCCCCCeeeeCCCCceecCCCCCCCCC
Q psy5025 41 ECL-EDKCNK--TPCEHGGKCITTPGSSYCLCPLGFTGDL 77 (533)
Q Consensus 41 ~C~-~d~C~~--~pC~NggtC~~~~~~y~C~C~~g~~G~~ 77 (533)
.|. +|+|.. +||+| |+|++..++|+|.|++||+|..
T Consensus 118 ~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 118 ILEDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp CEEECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCBCT
T ss_pred ccCccccccCCCCCcCC-CEeEcCCCCEEeeCCCCccCCC
Confidence 344 899985 57997 6999999999999999998754
No 149
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=95.30 E-value=0.26 Score=53.57 Aligned_cols=134 Identities=12% Similarity=0.124 Sum_probs=85.2
Q ss_pred ceeEEEEEEEecCCCe--eEEEccccCCC-CCCeEEEEEE-CCEEEEEEEcCCCce--EEEeecccc---CC--CcEEEE
Q psy5025 106 SLLDLTIVFKAIEPNG--ILLYNGHRADG-VGDFIALYLN-DRYVDFTFDLGTGAA--TLRSSNPIS---LG--EWHKLR 174 (533)
Q Consensus 106 ~~~~ls~~FrT~~~dG--lLl~~~~~~~~-~~~fl~l~L~-~G~l~~~~~~g~~~~--~v~s~~~ln---Dg--~Wh~V~ 174 (533)
..+++.|+|++..... .||-..+...+ ...|+.++|. +|++.+.+....+.. .+..+..+. .| .|++|.
T Consensus 57 ~~~T~~~~~~~~~~~~~~~lfs~sn~~~~~~~~~~~~~i~~~g~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~va 136 (686)
T 2jkb_A 57 ESQTVVMKFKADKPNSLQALFGLSNSKAGFKNNYFSIFMRDSGEIGVEIRDAQKGINYLFSRPASLWGKHKGQAVENTLV 136 (686)
T ss_dssp SCEEEEEEEECSSCCSEEEEEEEECCSTTCTTCEEEEEEETTSCEEEEEEETTTTEEEEEEESSCCCCEETTEECCEEEE
T ss_pred CceEEEEEEEccCCCCeeEEEEeecCcccccCcceEEEEcCCCeEEEEEecCCCCeeeeccccccccccccCCcceeEEE
Confidence 4689999999866432 34444433211 2589999997 788888877543322 232333343 35 799999
Q ss_pred EEEE--CCEEEEEEcCccCceeeCCCC--ceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEECcEEcc
Q psy5025 175 LTRT--GRHAYLQVDRFPSSQILSPGP--FTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELN 245 (533)
Q Consensus 175 v~~~--~~~~~L~VD~~~~~~~~~~~~--~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in~~~l~ 245 (533)
+..+ ...+.|+|||....+...... ...+.-...+.||+...... ..-.|.|-|.+++|-+.++.
T Consensus 137 ~~~d~~~~~~~lyvnG~~v~~~~~~~~~~~~~~~~~~~~~iG~~~~~g~------~~~~f~G~id~~~iy~~~Ls 205 (686)
T 2jkb_A 137 FVSDSKDKTYTMYVNGIEVFSETVDTFLPISNINGIDKATLGAVNREGK------EHYLAKGSIDEISLFNKAIS 205 (686)
T ss_dssp EEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEETTE------EESCCEEEEEEEEEESSCCC
T ss_pred EEEECCCCeEEEEECCEEEEeecccccceeccCCCcceeeecccccCCc------ccccccceEeEEEEecCCCC
Confidence 9998 669999999987655443221 11111124688998532211 11359999999999888776
No 150
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=95.27 E-value=0.0077 Score=53.43 Aligned_cols=35 Identities=23% Similarity=0.594 Sum_probs=28.4
Q ss_pred CC-CCCCCCCCC-CCCeeeecCCceEEecCCCCCcCcccce
Q psy5025 258 NC-AHPCITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEV 296 (533)
Q Consensus 258 ~C-~~~C~~~pC-ngg~C~~~~~~~~C~C~~g~~G~~c~~~ 296 (533)
.| ...|. .+| |||.|+. ...|.|+.||.|..|+..
T Consensus 145 ~C~~~~C~-~~C~ngG~Cv~---P~~C~C~~Gw~G~~C~~~ 181 (188)
T 2ygo_A 145 TCQQAECP-GGCRNGGFCNE---RRICECPDGFHGPHCEGT 181 (188)
T ss_dssp EECCCCCT-TCCCTTCEECT---TSCEECCTTCBTTTTCBC
T ss_pred cccCCccC-CCCCCCCEeCC---CCcccCcCCCCCCCCcCC
Confidence 35 34565 699 9999986 568999999999999864
No 151
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.03 E-value=0.004 Score=63.20 Aligned_cols=42 Identities=26% Similarity=0.614 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCeeeeCCCCceecCCCCCC----CCCccccccccc
Q psy5025 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFT----GDLCQTRLDLQV 86 (533)
Q Consensus 44 ~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~----G~~Ce~~~~~~~ 86 (533)
+|+|..+||....+|.+..++|.|.|++||. |+.| .++++|.
T Consensus 3 ~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C-~d~~eC~ 48 (386)
T 3v65_B 3 EENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTC-QDVNECA 48 (386)
T ss_dssp -----------------------------------------------
T ss_pred cCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCcc-CccceeC
Confidence 5789988877778998888999999999998 9999 5566664
No 152
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=94.84 E-value=0.0089 Score=64.80 Aligned_cols=40 Identities=30% Similarity=0.692 Sum_probs=35.8
Q ss_pred eee-cCCCC--CCCCCC---CCCCCCCeeeeCCCCceecCCCCCCCCCcc
Q psy5025 36 KGR-SKECL--EDKCNK---TPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79 (533)
Q Consensus 36 ~G~-~~~C~--~d~C~~---~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce 79 (533)
.|| |..|+ .+.|.. .+|.|+|+|++ +.|.|++||+|..|+
T Consensus 514 ~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~G~~Ce 559 (690)
T 3fcs_B 514 GKITGKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWTGYYCN 559 (690)
T ss_dssp CCCBSTTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTEESSSSC
T ss_pred CCeeCCCcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCCcCCCCc
Confidence 688 88897 678986 59999999987 899999999999999
No 153
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=94.74 E-value=0.013 Score=63.40 Aligned_cols=43 Identities=28% Similarity=0.682 Sum_probs=36.8
Q ss_pred ceee-cCCCC----CCCCCCC---CCCCCCeeeeCCCCceecCCCCCCCCCcccc
Q psy5025 35 IKGR-SKECL----EDKCNKT---PCEHGGKCITTPGSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 35 ~~G~-~~~C~----~d~C~~~---pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~ 81 (533)
..|| |..|+ .+.|..+ +|.++|+|+. +.|.|++||+|++|+..
T Consensus 543 ~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~----g~C~C~~Gy~G~~Ce~c 593 (687)
T 3k6s_B 543 HPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC----NVCECHSGYQLPLCQEC 593 (687)
T ss_dssp CTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS----SCBCCSTTCCTTTTCCC
T ss_pred CCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC----CEEECCCCCcCCCCCCC
Confidence 5678 88888 4789875 9999999987 57999999999999973
No 154
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=94.73 E-value=0.012 Score=41.45 Aligned_cols=34 Identities=29% Similarity=0.735 Sum_probs=27.4
Q ss_pred CCCCC--CCCCCCCeeeeCCCCceecCCCCCC----CCCccc
Q psy5025 45 DKCNK--TPCEHGGKCITTPGSSYCLCPLGFT----GDLCQT 80 (533)
Q Consensus 45 d~C~~--~pC~NggtC~~~~~~y~C~C~~g~~----G~~Ce~ 80 (533)
|+|.. .+|. ..|++..++|.|.|++||. |..|+.
T Consensus 2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~d 41 (55)
T 2jkh_L 2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLADNGKACIP 41 (55)
T ss_dssp CCTTTGGGGCS--SEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEECCCCCeecc
Confidence 56763 4686 4899999999999999994 677865
No 155
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=94.71 E-value=0.0085 Score=60.72 Aligned_cols=45 Identities=24% Similarity=0.745 Sum_probs=21.2
Q ss_pred ceee-----cCCCC-CCCCC-CCCCCCCCeeeeCCCCceecCCCCCC----CCCcccc
Q psy5025 35 IKGR-----SKECL-EDKCN-KTPCEHGGKCITTPGSSYCLCPLGFT----GDLCQTR 81 (533)
Q Consensus 35 ~~G~-----~~~C~-~d~C~-~~pC~NggtC~~~~~~y~C~C~~g~~----G~~Ce~~ 81 (533)
..|| +..|+ +++|. ..||.++ |++..++|.|.|++||. |+.|+..
T Consensus 29 ~~G~~l~~~~~~C~d~~eC~~~~~C~~~--C~~~~g~~~C~C~~g~~l~~d~~~C~~~ 84 (386)
T 3v65_B 29 HTGYRLTEDGRTCQDVNECAEEGYCSQG--CTNSEGAFQCWCEAGYELRPDRRSCKAL 84 (386)
T ss_dssp -----------------------CCTTE--EC-----CCEECCTTEEECTTSSCEEEC
T ss_pred CCCceECCCCCccCccceeCCcCcccCc--CCCCCCCCeEEECCCceEcCCCCeECCc
Confidence 5676 67897 78996 6899875 99999999999999997 8899864
No 156
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=94.70 E-value=0.013 Score=51.95 Aligned_cols=43 Identities=30% Similarity=0.757 Sum_probs=33.1
Q ss_pred eee-cCC-CC-CCCCCCCC-----CCCCCeeeeCCCCceecCCCCCC----CCCccc
Q psy5025 36 KGR-SKE-CL-EDKCNKTP-----CEHGGKCITTPGSSYCLCPLGFT----GDLCQT 80 (533)
Q Consensus 36 ~G~-~~~-C~-~d~C~~~p-----C~NggtC~~~~~~y~C~C~~g~~----G~~Ce~ 80 (533)
.|| ..- |. +++|...+ |++ .|++..++|.|.|++||+ |..|+.
T Consensus 113 ~Gf~~~~~~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~~d~~~C~~ 167 (170)
T 1szb_A 113 TGFEAFYAAEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLHRNKRTCSE 167 (170)
T ss_dssp CEEEEEEEEEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred cCceeeeeccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEECCCCCcccc
Confidence 688 333 22 68888654 886 799999999999999997 777764
No 157
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=94.54 E-value=0.021 Score=61.93 Aligned_cols=42 Identities=31% Similarity=0.658 Sum_probs=36.7
Q ss_pred ceee-cCCCC----CCCCCC---CCCCCCCeeeeCCCCceecC-CCCCCCCCccc
Q psy5025 35 IKGR-SKECL----EDKCNK---TPCEHGGKCITTPGSSYCLC-PLGFTGDLCQT 80 (533)
Q Consensus 35 ~~G~-~~~C~----~d~C~~---~pC~NggtC~~~~~~y~C~C-~~g~~G~~Ce~ 80 (533)
..|| |..|+ .+.|.. .+|.|+|+|++ ..|.| ++||+|+.|+.
T Consensus 550 ~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~----g~C~C~~~Gy~G~~Ce~ 600 (690)
T 3fcs_B 550 DSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC----GSCVCIQPGSYGDTCEK 600 (690)
T ss_dssp CTTEESSSSCEECCCTTTBCTTSSBTSSSCEEET----TEEECCSTTCBSTTSCB
T ss_pred cCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeC----CEEECCCCCccCCCcCc
Confidence 5688 88888 678986 78999999976 39999 99999999997
No 158
>1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A*
Probab=94.47 E-value=0.82 Score=45.74 Aligned_cols=128 Identities=12% Similarity=0.146 Sum_probs=78.9
Q ss_pred ceeEEEEEEEecCC---------Ce--eEEEcc-ccCCCCCCeEEEEEECCEEEEEEEcCCCce-EEE---eecccc---
Q psy5025 106 SLLDLTIVFKAIEP---------NG--ILLYNG-HRADGVGDFIALYLNDRYVDFTFDLGTGAA-TLR---SSNPIS--- 166 (533)
Q Consensus 106 ~~~~ls~~FrT~~~---------dG--lLl~~~-~~~~~~~~fl~l~L~~G~l~~~~~~g~~~~-~v~---s~~~ln--- 166 (533)
..++|+|++|+... +| .|+-.- ....+...-..+.|.+..+.+.+....+.. .+. .+..+.
T Consensus 85 ~dFSISFWvK~~k~~~~~i~~~~~~e~TIin~k~~n~~s~nsGW~I~l~gn~liw~l~Dsng~~~~i~f~~~~~~Isd~~ 164 (452)
T 1a8d_A 85 NNFTVSFWLRVPKVSASHLEQYGTNEYSIISSMKKHSLSIGSGWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYL 164 (452)
T ss_dssp SCEEEEEEEECCCCCHHHHHHHTTCEEEEEECCEECGGGCEEEEEEEEETTEEEEEEECTTSCEEEEEEECCSBTTSCSS
T ss_pred CceEEEEEEECCCcCcccccccccCcceEEeeeccccccCCCCeEEEeCCCeEEEEEEcCCCceeeEEeccccccCcccc
Confidence 37999999999764 22 333221 100000223556778889998888644432 222 234444
Q ss_pred CCCcEEEEEEEE-CCEEEEEEcCccCceeeCCCCceeeecCCCEEEc--CcCCCCccCCCcccccCceeeeeeEEECcEE
Q psy5025 167 LGEWHKLRLTRT-GRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLG--GVPDYNIVSPKVKIKSSFIGCIQKVLINNHE 243 (533)
Q Consensus 167 Dg~Wh~V~v~~~-~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vG--G~p~~~~~~~~~~~~~~F~GCI~~l~in~~~ 243 (533)
+|+||+|+++.. .+...+.|||....+....+ ...+.....+-+| +... ..+.+.|+++.+-.++
T Consensus 165 ~nkW~fVtItvDR~g~~~IYING~Lv~s~~It~-lG~I~ss~~i~~gi~~~~d-----------~~~~~~IDef~Iynk~ 232 (452)
T 1a8d_A 165 ANKWVFITITNDRLSSANLYINGVLMGSAEITG-LGAIREDNNITLKLDRCNN-----------NNQYVSIDKFRIFCKA 232 (452)
T ss_dssp SSSCEEEEEEECTTSEEEEEETTEEEEEEECTT-CCCCCCCSEEEEEEESCCC-----------TTCEEEEEEEEEESSC
T ss_pred CCeEEEEEEEECCCCCEEEEECCEEeeccchhh-ccceeecCeEEEEEcccCC-----------CcccceEeeEEEeccc
Confidence 699999999988 55669999997765544332 2233333444555 4443 3466789999998887
Q ss_pred cc
Q psy5025 244 LN 245 (533)
Q Consensus 244 l~ 245 (533)
+.
T Consensus 233 Lt 234 (452)
T 1a8d_A 233 LN 234 (452)
T ss_dssp CC
T ss_pred CC
Confidence 76
No 159
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=94.39 E-value=0.014 Score=51.71 Aligned_cols=43 Identities=16% Similarity=0.199 Sum_probs=34.7
Q ss_pred ceee-cCCCCCCCCCC-CCCCCCCeeeeCCCCceecCCCCCCCCCcccc
Q psy5025 35 IKGR-SKECLEDKCNK-TPCEHGGKCITTPGSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 35 ~~G~-~~~C~~d~C~~-~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~ 81 (533)
..|| +..|+ ..|.+ ++|.++++|.. ...|.|++||+|+.|+..
T Consensus 22 ~~g~~G~~C~-~~C~~~~~c~~~g~C~~---~g~C~C~~G~~G~~C~~~ 66 (169)
T 2vj2_A 22 DDYYYGFGCN-KFCRPRDDFFGHYACDQ---NGNKTCMEGWMGPECNRA 66 (169)
T ss_dssp CTTEETTTTC-EECCCEEETTEEEEECS---SCCEEECTTEESTTSCEE
T ss_pred CCcCcCCCcc-cccCCCCCcCCCCEeCC---CCeeECCCCCcCCCCCCC
Confidence 6788 88887 45775 37888999964 568999999999999864
No 160
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.14 E-value=0.0071 Score=62.83 Aligned_cols=43 Identities=35% Similarity=0.904 Sum_probs=11.1
Q ss_pred ceee-cCCCCCCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCcccc
Q psy5025 35 IKGR-SKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 35 ~~G~-~~~C~~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~ 81 (533)
..|| +..|+++.|.+ ||+|+|+|++. +.|.|++||+|.+|+..
T Consensus 413 ~~G~~G~~C~~~~C~~-~C~~~g~C~~~---~~C~C~~G~~G~~C~~~ 456 (463)
T 2wg3_C 413 SPGWEGDFCRTAKCEP-ACRHGGVCVRP---NKCLCKKGYLGPQCEQV 456 (463)
T ss_dssp CTTEESTTSCEECC----------------------------------
T ss_pred CCCcCCCcCCcCcCCC-CCCCCCEECCC---CEEECCCCcccCCCCCC
Confidence 5788 88999889988 99999999975 69999999999999986
No 161
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=94.04 E-value=0.53 Score=42.05 Aligned_cols=82 Identities=11% Similarity=0.088 Sum_probs=54.0
Q ss_pred ceeEEEEEEEecC-----CCeeEEEccccCCCCCCeEEEEEEC--CEEEEEEEcCCCceEEE-eeccccCCCcEEEEEEE
Q psy5025 106 SLLDLTIVFKAIE-----PNGILLYNGHRADGVGDFIALYLND--RYVDFTFDLGTGAATLR-SSNPISLGEWHKLRLTR 177 (533)
Q Consensus 106 ~~~~ls~~FrT~~-----~dGlLl~~~~~~~~~~~fl~l~L~~--G~l~~~~~~g~~~~~v~-s~~~lnDg~Wh~V~v~~ 177 (533)
..+.+++.++... ..|++|..... ...++.+.+.. +++.+.-..++....+. .+..+..|+||+++|+.
T Consensus 64 ~Df~le~dvk~~~~~~~g~~Gi~fR~~~d---~~~gY~~~i~~~~~~~~l~k~~~g~~~~L~~~~~~~~~g~w~~l~I~~ 140 (185)
T 4b1m_A 64 SDFTYESDITIKDGNGRGAGALMFRSDKD---AKNGYLANVDAKHDLVKFFKFENGAASVIAEYKTPIDVNKKYHLKTEA 140 (185)
T ss_dssp SSEEEEEEEEEEEEEEEEEEEEEEEECTT---SSSEEEEEEETTTTEEEEEEEETTEEEEEEEEECCCCSSCCEEEEEEE
T ss_pred cCEEEEEEEEEcCCCCcceEEEEEEEcCC---CCCcEEEEEECCCCEEEEEEEeCCcEEEeeeccccCCCCCeEEEEEEE
Confidence 3567777777644 23565555221 25788888875 46655332232223333 23567889999999999
Q ss_pred ECCEEEEEEcCcc
Q psy5025 178 TGRHAYLQVDRFP 190 (533)
Q Consensus 178 ~~~~~~L~VD~~~ 190 (533)
.+..++++||+..
T Consensus 141 ~G~~i~~~vnG~~ 153 (185)
T 4b1m_A 141 EGDRFKIYLDDRL 153 (185)
T ss_dssp ETTEEEEEETTEE
T ss_pred ECCEEEEEECCEE
Confidence 9999999999964
No 162
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=93.62 E-value=0.032 Score=49.00 Aligned_cols=30 Identities=37% Similarity=0.979 Sum_probs=27.4
Q ss_pred CCCCCCeeeeCC--CCcee-cCCCCCCCCCccc
Q psy5025 51 PCEHGGKCITTP--GSSYC-LCPLGFTGDLCQT 80 (533)
Q Consensus 51 pC~NggtC~~~~--~~y~C-~C~~g~~G~~Ce~ 80 (533)
||+|+++|.... +.+.| .|+.+|+|++||.
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~ 34 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCEL 34 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSCE
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCcC
Confidence 799999999876 57999 7999999999996
No 163
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=93.56 E-value=0.023 Score=52.40 Aligned_cols=40 Identities=30% Similarity=0.730 Sum_probs=34.5
Q ss_pred e-cCCCC--CCCCCCC---CCCCC--CeeeeCCCCceecCCCCCCCCCcccc
Q psy5025 38 R-SKECL--EDKCNKT---PCEHG--GKCITTPGSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 38 ~-~~~C~--~d~C~~~---pC~Ng--gtC~~~~~~y~C~C~~g~~G~~Ce~~ 81 (533)
| +..|+ .+.|..+ +|.++ |+|.. ..|.|.+||+|+.|+..
T Consensus 168 ~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~~G~~C~~~ 215 (217)
T 2p28_B 168 IYGQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGSACQHH 215 (217)
T ss_dssp EESTTSCEESSCSCEETTEETTCTTTEEEET----TEEEECTTEESTTSCEE
T ss_pred EECCCcccCCccCCCCCCCCCCCCCCcEEeC----CeeECCCCCccCCcCCC
Confidence 6 88898 6789876 89988 99986 39999999999999864
No 164
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=93.40 E-value=0.055 Score=37.46 Aligned_cols=25 Identities=24% Similarity=0.606 Sum_probs=21.4
Q ss_pred CCCCCCeeeecCCceEEecCCCCCcC
Q psy5025 266 QPCGSGSCVPLYDGYKCVCTQSCKES 291 (533)
Q Consensus 266 ~pCngg~C~~~~~~~~C~C~~g~~G~ 291 (533)
.||. ++|++...+|.|.|++||.+.
T Consensus 20 ~~C~-~~C~n~~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 20 PQCQ-HLCHNYVGGYFCSCRPGYELQ 44 (53)
T ss_dssp CTTS-SEEEEETTEEEEECSTTCEEC
T ss_pred CCCC-CEeECCCCCeEEECCCCCeEC
Confidence 5784 399999999999999999763
No 165
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=93.20 E-value=0.078 Score=46.15 Aligned_cols=64 Identities=19% Similarity=0.391 Sum_probs=41.1
Q ss_pred EEEEEEeCceeEEEEcCCCCc--eee-cC-CC-CCCCCCC---CCCCCCCeeeeCCCCceecCCCCCC----CCCccc
Q psy5025 15 TVRVFRHRWDAWIQLNDGNKI--KGR-SK-EC-LEDKCNK---TPCEHGGKCITTPGSSYCLCPLGFT----GDLCQT 80 (533)
Q Consensus 15 ~v~~~r~~~~~~l~vd~~~~~--~G~-~~-~C-~~d~C~~---~pC~NggtC~~~~~~y~C~C~~g~~----G~~Ce~ 80 (533)
.|.-..+...+.+.-|..... .|| .. .| .+++|.. .+|. ..|.+..++|.|.|++||. |+.|+.
T Consensus 83 ~~~S~~n~l~v~F~Sd~~~~~~~~GF~~~y~~~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 83 EFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp EEEESSSEEEEEEEECSCCTTCCCEEEEEEEEEECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred eEEecCCeEEEEEEecCccCcccccceeeeecccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcEECCCCCcccc
Confidence 333333444455555544332 688 22 22 2678874 3574 6899999999999999997 777764
No 166
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=93.15 E-value=0.016 Score=58.58 Aligned_cols=29 Identities=41% Similarity=1.049 Sum_probs=0.0
Q ss_pred CCCCCCCeeeeCCCCceecCCCCCCCCCcccc
Q psy5025 50 TPCEHGGKCITTPGSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 50 ~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~ 81 (533)
.||+|||+|.+.. .|.|++||+|..|+..
T Consensus 371 ~~C~ngg~C~~~~---~C~C~~G~~G~~Ce~c 399 (426)
T 3zyj_B 371 LHCQNGGTCHNNV---RCLCPAAYTGILCEKL 399 (426)
T ss_dssp --------------------------------
T ss_pred ccCCCCCCcCCCC---CCcCCCCCcCCCCcCC
Confidence 5899999999876 9999999999999874
No 167
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=92.94 E-value=0.045 Score=55.66 Aligned_cols=34 Identities=24% Similarity=0.592 Sum_probs=23.3
Q ss_pred CCCCCCCC-CCCeeeecCCceEEecCCCCC---cCccc
Q psy5025 261 HPCITQPC-GSGSCVPLYDGYKCVCTQSCK---ESHLT 294 (533)
Q Consensus 261 ~~C~~~pC-ngg~C~~~~~~~~C~C~~g~~---G~~c~ 294 (533)
++|..+|| ++++|++...+|.|.|++||. |..|+
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~ 38 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE 38 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEE
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCccc
Confidence 35777777 667777777777777777776 54443
No 168
>3v0a_B NTNH; botulinum neurotoxin, toxin, neurotoxin associated protein, progenitor toxin complex, VHH bound interlocked complex; HET: MES; 2.70A {Clostridium botulinum} PDB: 3v0b_B
Probab=92.51 E-value=5.9 Score=42.97 Aligned_cols=88 Identities=17% Similarity=0.220 Sum_probs=60.6
Q ss_pred ceeeEEEEEEEeCCCC---eEEEEeccCCCCCeEEEEEECCEEEEEEEcCCc-eEEEeeCceeecCCCeEEEEEEEeeee
Q psy5025 336 GYEFNIDMRIKTSSSS---GLILWTGSSQSKDFLALGIHNGYAHVMYNLGNG-EVLLENNQTKINNGVWHRLTVHRNFMV 411 (533)
Q Consensus 336 ~~~~~i~~~~rt~~~~---g~ll~~~~~~~~~~l~l~l~~g~l~~~~~~g~~-~~~~~~~~~~~~dg~wH~v~~~~~~~~ 411 (533)
...++|+||+|...-+ -.|+-.-....+ -.+++.++.+...+...++ ...+.++ .+.+++||+|+++..
T Consensus 901 tnnFSISFWVRipk~~~~eyTIIg~~~nNsG--W~ISf~~n~LIWtl~DsnGn~knI~f~--dy~~NkWyfITISvD--- 973 (1196)
T 3v0a_B 901 TNSFSIYFWLRNLGKDTIKSKLIGSKEDNCG--WEIYFQDTGLVFNMIDSNGNEKNIYLS--DVSNNSWHYITISVD--- 973 (1196)
T ss_dssp SCCEEEEEEEEECCCCCSCEEEEEEEETTEE--EEEEEETTEEEEEEECTTCCEEEEEEC--SCCSSSCEEEEEEEE---
T ss_pred ccceEEEEEEEcCCcCCccceEEEeecCCCC--cEEEECCCeEEEEEEcCCCcccceEec--cccCCcEEEEEEEEc---
Confidence 3479999999997533 344422222112 4677799998888875444 3344434 788999999999982
Q ss_pred eecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEe
Q psy5025 412 VMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSI 457 (533)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~ 457 (533)
|.+..+.|.|||..+....
T Consensus 974 ---------------------------RLGnalkIYINGkLv~~~s 992 (1196)
T 3v0a_B 974 ---------------------------RLKEQLLIFIDDNLVANES 992 (1196)
T ss_dssp ---------------------------TTTTEEEEEETTEEEEEEE
T ss_pred ---------------------------CCCceeEEEECCEEeechh
Confidence 2677779999999887753
No 169
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=91.60 E-value=0.072 Score=57.59 Aligned_cols=47 Identities=28% Similarity=0.577 Sum_probs=36.4
Q ss_pred ceee-cCCCC--CC---------CCCCC----CCCCCCeeeeCCCCceecCC------CCCCCCCcccccccc
Q psy5025 35 IKGR-SKECL--ED---------KCNKT----PCEHGGKCITTPGSSYCLCP------LGFTGDLCQTRLDLQ 85 (533)
Q Consensus 35 ~~G~-~~~C~--~d---------~C~~~----pC~NggtC~~~~~~y~C~C~------~g~~G~~Ce~~~~~~ 85 (533)
..|| |..|+ .+ .|... +|.|+|+|+. ..|.|+ +||+|+.||.+...|
T Consensus 451 ~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----G~C~C~~~~~~~~G~~G~~Ce~~~~~C 519 (687)
T 3k6s_B 451 DTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGKLIYGQYCECDTINC 519 (687)
T ss_dssp CSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET----TEEEECCCCSTTCCEESTTSCEESSCS
T ss_pred CCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC----CEEEcCCCCCCCCCccccccccccccc
Confidence 5677 88887 33 58754 5999999994 399999 999999999764433
No 170
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=91.49 E-value=0.047 Score=52.00 Aligned_cols=35 Identities=17% Similarity=0.544 Sum_probs=28.5
Q ss_pred CCCC--CCCC-CCCeeeecCCceEEecCCCCCc--Ccccc
Q psy5025 261 HPCI--TQPC-GSGSCVPLYDGYKCVCTQSCKE--SHLTE 295 (533)
Q Consensus 261 ~~C~--~~pC-ngg~C~~~~~~~~C~C~~g~~G--~~c~~ 295 (533)
++|. ..+| .++.|++...+|.|.|++||.| ..|..
T Consensus 6 DEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~d 45 (285)
T 1gl4_A 6 QTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCVA 45 (285)
T ss_dssp -CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEEE
T ss_pred hhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCCC
Confidence 4565 5789 8899999999999999999984 55654
No 171
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=91.43 E-value=0.042 Score=50.67 Aligned_cols=47 Identities=26% Similarity=0.591 Sum_probs=35.9
Q ss_pred ceee-cCCCC--CC---------CCC----CCCCCCCCeeeeCCCCceecCCCC------CCCCCcccccccc
Q psy5025 35 IKGR-SKECL--ED---------KCN----KTPCEHGGKCITTPGSSYCLCPLG------FTGDLCQTRLDLQ 85 (533)
Q Consensus 35 ~~G~-~~~C~--~d---------~C~----~~pC~NggtC~~~~~~y~C~C~~g------~~G~~Ce~~~~~~ 85 (533)
..|| +..|+ .+ .|. ..+|.++|+|++ ..|.|+++ |+|+.||.+...|
T Consensus 112 ~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw~~~~~~~G~~Ce~~~~~C 180 (217)
T 2p28_B 112 DTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGKLIYGQYCECDTINC 180 (217)
T ss_dssp CTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCCSTTCCEESTTSCEESSCS
T ss_pred CCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCCCCcccEECCCcccCCccC
Confidence 5677 78887 22 365 478999999995 48999999 6999999765444
No 172
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=91.42 E-value=0.036 Score=58.58 Aligned_cols=37 Identities=27% Similarity=0.579 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCeeeeCC--CCceecCCCCCCCCCccc
Q psy5025 44 EDKCNKTPCEHGGKCITTP--GSSYCLCPLGFTGDLCQT 80 (533)
Q Consensus 44 ~d~C~~~pC~NggtC~~~~--~~y~C~C~~g~~G~~Ce~ 80 (533)
.+.|.+.+|.|+|.|.+.- ..+.|.|++||+|++||+
T Consensus 487 ~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 487 LDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp ---------------------------------------
T ss_pred CCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence 3679999999999988763 455899999999999985
No 173
>1epw_A Bontoxilysin B, botulinum neurotoxin type B; zinc, metalloprotease, transmembrane, hydrolase; 1.90A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 1f31_A* 1g9a_A* 1g9b_A* 1g9c_A* 1g9d_A* 1i1e_A* 1s0b_A 1s0c_A 1s0d_A 1s0e_A 1s0f_A 1s0g_A 2np0_A 3zuq_A 2etf_A 2xhl_A 1z0h_A 2nm1_A 3g94_A 1f82_A ...
Probab=90.56 E-value=3.7 Score=45.66 Aligned_cols=128 Identities=9% Similarity=0.053 Sum_probs=78.4
Q ss_pred eeeEEEEEEEeCCC-----C------eEEEEeccCCCCCeEEEEEECCEEEEEEEcCCc-eEEEeeC---ceeec--CCC
Q psy5025 337 YEFNIDMRIKTSSS-----S------GLILWTGSSQSKDFLALGIHNGYAHVMYNLGNG-EVLLENN---QTKIN--NGV 399 (533)
Q Consensus 337 ~~~~i~~~~rt~~~-----~------g~ll~~~~~~~~~~l~l~l~~g~l~~~~~~g~~-~~~~~~~---~~~~~--dg~ 399 (533)
..++|+||+|..+- + -.|+-.-... .=-.|++.++.+...+.-.++ ...+.+. ...+. -++
T Consensus 923 ~nFSIsFWiRipk~~~~~it~y~~nEyTiIg~~~nN--sGW~Isi~~n~lIWtl~D~ng~~k~I~f~y~~~~nisdyiNk 1000 (1290)
T 1epw_A 923 LDFSVSFWIRIPKYKNDGIQNYIHNEYTIINCMKNN--SGWKISIRGNRIIWTLIDINGKTKSVFFEYNIREDISEYINR 1000 (1290)
T ss_dssp CCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEETT--EEEEEEEETTEEEEEEECTTCCEEEEEEECCSSCSSCSSTTS
T ss_pred cceeEEEEEEcCCccccccccccCCCceEEEEecCC--CCcEEEECCCeEEEEEecCCCcceeEEEecccccchhhccCc
Confidence 46899999999765 2 3444222121 225677898888888775444 3333332 12333 289
Q ss_pred eEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEecCCcceeeccCCceEEcCCCCc
Q psy5025 400 WHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDI 479 (533)
Q Consensus 400 wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~lGg~~~~ 479 (533)
||+|+++. +-+.+.|+|||..+......... .+.....+-+|=+.
T Consensus 1001 W~fVTItn--------------------------------dlg~~~IYING~Li~~~~I~~L~-dI~ss~~I~fglvn-- 1045 (1290)
T 1epw_A 1001 WFFVTITN--------------------------------NLNNAKIYINGKLESNTDIKDIR-EVIANGEIIFKLDG-- 1045 (1290)
T ss_dssp CEEEEEEE--------------------------------CSSEEEEEETTEEEEEEECSSCC-CCCCCSEEEEEEEE--
T ss_pred eEEEEEEe--------------------------------cCCceEEEECCEEeechhhhhhh-ceeecceEEEEecc--
Confidence 99999999 77799999999988775332211 22222323333111
Q ss_pred ccccccccccCceeeEEEEEEcCceEEee
Q psy5025 480 EELTRSKYHHSFKGWISNLILSNDYQVKL 508 (533)
Q Consensus 480 ~~~~~~~~~~~f~GCi~~l~i~~~~~l~~ 508 (533)
-....+.|+|++++| =+++|+-
T Consensus 1046 ------~~D~~~~i~Id~f~I-fnkeLt~ 1067 (1290)
T 1epw_A 1046 ------DIDRTQFIWMKYFSI-FNTELSQ 1067 (1290)
T ss_dssp ------SCCTTCCEEEEEEEE-ESSCCCH
T ss_pred ------CCCCCceeeEeeEEE-ecCcCCH
Confidence 134569999999999 4555543
No 174
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=90.16 E-value=0.14 Score=54.93 Aligned_cols=67 Identities=16% Similarity=0.439 Sum_probs=50.0
Q ss_pred CCceEEEEEEeC----ceeEEEEcCC---CCceee-cCCCC-CCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCcccc
Q psy5025 11 DDWNTVRVFRHR----WDAWIQLNDG---NKIKGR-SKECL-EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 11 ~~WH~v~~~r~~----~~~~l~vd~~---~~~~G~-~~~C~-~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~ 81 (533)
+.|.+|++.--. ...++...+. ..-.|+ +.+|. ...|.. .|...|.|++. .|.|.+||+|..|+..
T Consensus 492 ~~w~RiT~~lp~~~~s~~trFRw~q~~~~~C~~gw~g~dc~i~~~Cp~-~C~ghG~C~~G----~C~Cd~G~~G~~C~~~ 566 (725)
T 2e26_A 492 NKWTRITLPLPSYTRSQATRFRWHQPAPFDKQQTWAIDNVYIGDGCLD-MCSGHGRCVQG----SCVCDEQWGGLYCDEP 566 (725)
T ss_dssp SSCEEEEEECCGGGCEEEEEEEEEECSSCCTTCCEEEEEEEEESCSSG-GGGGSEEEETT----EEEECTTEESTTSCEE
T ss_pred CCceEEEEeCcccccCCcceEEeccccCCccCCCcccccccccCCCCc-ccCCCcEECCC----CEeeCCCccCCCcCcc
Confidence 699999984322 2344444443 235577 88888 578875 89999999986 8999999999999976
Q ss_pred c
Q psy5025 82 L 82 (533)
Q Consensus 82 ~ 82 (533)
.
T Consensus 567 ~ 567 (725)
T 2e26_A 567 E 567 (725)
T ss_dssp S
T ss_pred C
Confidence 4
No 175
>2nyy_A Botulinum neurotoxin type A; neurotoxin, FAB, protein antibody complex, toxin- system complex; 2.61A {Clostridium botulinum} PDB: 2nz9_A 3bta_A 3v0a_A* 3v0b_A 3v0c_A 3zus_A 3zur_A
Probab=90.02 E-value=3.1 Score=46.27 Aligned_cols=128 Identities=12% Similarity=0.045 Sum_probs=75.7
Q ss_pred eeeEEEEEEEeCCCC--------eEEE-EeccCCCCCeEEEEEECCEEEEEEEcCCc-eEEEeeC---ceeec--CCCeE
Q psy5025 337 YEFNIDMRIKTSSSS--------GLIL-WTGSSQSKDFLALGIHNGYAHVMYNLGNG-EVLLENN---QTKIN--NGVWH 401 (533)
Q Consensus 337 ~~~~i~~~~rt~~~~--------g~ll-~~~~~~~~~~l~l~l~~g~l~~~~~~g~~-~~~~~~~---~~~~~--dg~wH 401 (533)
..++|+||+|..+-+ -.|+ ... .. .=-.+++.++.+...+.-.++ ...+.+. ...+. -++||
T Consensus 938 ~nFSIsFWvRipk~~~~~~~~neyTIIg~~~-nN--sGW~Is~~~n~LIWtl~Dsng~~k~I~f~y~~~~nisdyiNkW~ 1014 (1295)
T 2nyy_A 938 ENFSTSFWIRIPKYFNSISLNNEYTIINCME-NN--SGWKVSLNYGEIIWTLQDTQEIKQRVVFKYSQMINISDYINRWI 1014 (1295)
T ss_dssp SEEEEEEEEECCCCCSGGGGGCCEEEEEEEE-TT--EEEEEEEETTEEEEEEECSSSCEEEEEEECCSBSSSCSSTTSCE
T ss_pred CceEEEEEEEcCCcccccccCCcceEEEeec-CC--CCcEEEECCCeEEEEEecCCCccceEEEecccccchhhccCceE
Confidence 479999999995311 2333 321 11 124677788888888775444 2333322 12233 28999
Q ss_pred EEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEecCCcceeeccCCceEEcCCCCccc
Q psy5025 402 RLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEE 481 (533)
Q Consensus 402 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~lGg~~~~~~ 481 (533)
+|+++.. .-+...|+|||..+......+. ..+..+..+-+|-+.
T Consensus 1015 fVTITnd-------------------------------Rlgna~IYINGkLi~~~~I~~l-~nI~~sd~Isfk~~g---- 1058 (1295)
T 2nyy_A 1015 FVTITNN-------------------------------RLNNSKIYINGRLIDQKPISNL-GNIHASNNIMFKLDG---- 1058 (1295)
T ss_dssp EEEEEEE-------------------------------TTSEEEEEETTEEEEEEECTTC-CCCCCCSEEEEEEES----
T ss_pred EEEEEEc-------------------------------CCCceeEEECCEEeecceeccc-CCcccCceEEEEecc----
Confidence 9999992 1455699999998877533221 223333334444111
Q ss_pred ccccccccCceeeEEEEEEcCceEEee
Q psy5025 482 LTRSKYHHSFKGWISNLILSNDYQVKL 508 (533)
Q Consensus 482 ~~~~~~~~~f~GCi~~l~i~~~~~l~~ 508 (533)
.....+.++|++++| =+++|+-
T Consensus 1059 ----~nD~~~~i~Id~l~I-fnkeLt~ 1080 (1295)
T 2nyy_A 1059 ----CRDTHRYIWIKYFNL-FDKELNE 1080 (1295)
T ss_dssp ----CCCTTCEEEEEEEEE-ESSCCCH
T ss_pred ----CCCCccceeEeeEEE-ecCcCCH
Confidence 113468999999999 5555543
No 176
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=89.82 E-value=0.16 Score=37.69 Aligned_cols=30 Identities=30% Similarity=0.845 Sum_probs=22.2
Q ss_pred CCCCC--CCC-CCCeeeecCCceEEecC-CCCCc
Q psy5025 261 HPCIT--QPC-GSGSCVPLYDGYKCVCT-QSCKE 290 (533)
Q Consensus 261 ~~C~~--~pC-ngg~C~~~~~~~~C~C~-~g~~G 290 (533)
++|.. ++| ++++|++...+|.|.|. .||.+
T Consensus 4 dEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~ 37 (71)
T 2kl7_A 4 NECLTIPEACKGEMKCINHYGGYLCLPRSAAVIN 37 (71)
T ss_dssp CCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCS
T ss_pred ccccCCCCCCCCCCEeECCCCCeEecccCCcccc
Confidence 45653 679 88999999999999943 34443
No 177
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=89.79 E-value=0.15 Score=53.68 Aligned_cols=46 Identities=22% Similarity=0.424 Sum_probs=35.8
Q ss_pred ceee-cCCCC-CCCCCCCCCCCCCeeeeCC----CCceecCCCCCCCCCccc
Q psy5025 35 IKGR-SKECL-EDKCNKTPCEHGGKCITTP----GSSYCLCPLGFTGDLCQT 80 (533)
Q Consensus 35 ~~G~-~~~C~-~d~C~~~pC~NggtC~~~~----~~y~C~C~~g~~G~~Ce~ 80 (533)
..|| +..|. .+.|.+.+|.++|+|.+.. ..+.|.|+++|+|++|+.
T Consensus 424 ~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~ 475 (525)
T 4aqs_A 424 KEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQ 475 (525)
T ss_dssp CTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC
T ss_pred CCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCccc
Confidence 3455 45555 4678888999999887753 567899999999999985
No 178
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=88.30 E-value=0.24 Score=54.85 Aligned_cols=39 Identities=28% Similarity=0.650 Sum_probs=31.6
Q ss_pred CCCCCCCCCCC-----eeeeCCCCceecCCCCC---CCCCcccccccc
Q psy5025 46 KCNKTPCEHGG-----KCITTPGSSYCLCPLGF---TGDLCQTRLDLQ 85 (533)
Q Consensus 46 ~C~~~pC~Ngg-----tC~~~~~~y~C~C~~g~---~G~~Ce~~~~~~ 85 (533)
.|..++|.++. +|++..++|.|.|++|| .|+.|+ ++++|
T Consensus 309 ~C~~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l~~g~~C~-dideC 355 (791)
T 3m0c_C 309 ECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDEC 355 (791)
T ss_dssp TBSCCSTTTGGGGCSSEEEECSBSEEEECCTTCEEETTTEEE-CCCCC
T ss_pred ccccccccccccCccccccCCCCCcccCCCCCCccCCCCccc-cCccc
Confidence 47777887654 99999999999999999 488997 45555
No 179
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=87.83 E-value=0.26 Score=55.56 Aligned_cols=39 Identities=26% Similarity=0.665 Sum_probs=34.6
Q ss_pred CCCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCccccc
Q psy5025 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL 82 (533)
Q Consensus 44 ~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~~ 82 (533)
.+.|.-+||+|||+|+...+...|.|+++|.|..|+...
T Consensus 497 ~~~c~C~PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~~~ 535 (913)
T 3t5o_A 497 FDPCQCAPCPNNGRPTLSGTECLCVCQSGTYGENCEKQS 535 (913)
T ss_dssp TCGGGSCCBTTTBEEEEETTEEEEECCTTBCSTTSCCBC
T ss_pred cccccCCCCCCCCEeecCCCceEEEccCCccccCccCcc
Confidence 355766799999999998899999999999999999875
No 180
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=87.63 E-value=1.1 Score=49.72 Aligned_cols=45 Identities=27% Similarity=0.658 Sum_probs=34.2
Q ss_pred ceee----cCCCC-CCCCCCCCCCCCCeeeeCCCCceecCCCCCC----CCCccc
Q psy5025 35 IKGR----SKECL-EDKCNKTPCEHGGKCITTPGSSYCLCPLGFT----GDLCQT 80 (533)
Q Consensus 35 ~~G~----~~~C~-~d~C~~~pC~NggtC~~~~~~y~C~C~~g~~----G~~Ce~ 80 (533)
..|| +..|+ +|+|. +|+..+++|++..++|.|.|++||. |+.|..
T Consensus 338 ~~Gy~l~~g~~C~dideC~-~~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~ 391 (791)
T 3m0c_C 338 PDGFQLVAQRRCEDIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKA 391 (791)
T ss_dssp CTTCEEETTTEEECCCCCS-SSSSCTTTCCBCSSCBCCCCCSSEECCSSCCCCEE
T ss_pred CCCCccCCCCccccCcccC-CCCCCCCeeecCCCCceeecCCCCEeCCCCceeee
Confidence 4566 56787 89997 3344456999999999999999994 566764
No 181
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=87.61 E-value=0.19 Score=34.47 Aligned_cols=29 Identities=21% Similarity=0.650 Sum_probs=23.7
Q ss_pred CCCCCCCeeeeCCCCceecCCCCCC----CCCccc
Q psy5025 50 TPCEHGGKCITTPGSSYCLCPLGFT----GDLCQT 80 (533)
Q Consensus 50 ~pC~NggtC~~~~~~y~C~C~~g~~----G~~Ce~ 80 (533)
.+|++ .|++..++|.|.|+.||. |+.|+.
T Consensus 6 g~C~~--~C~n~~gs~~C~C~~Gy~L~~d~~tC~d 38 (51)
T 1kig_L 6 GGCDQ--FCREERSEVRCSCAHGYVLGDDSKSCVS 38 (51)
T ss_dssp TSSSS--CCCEETTEECCCCCTTEEECTTSSCEEE
T ss_pred CCcCC--EeEcCCCCeEEeCCCCcEECCCCCcccc
Confidence 35753 699999999999999994 778875
No 182
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=87.52 E-value=0.34 Score=33.81 Aligned_cols=28 Identities=18% Similarity=0.491 Sum_probs=21.8
Q ss_pred CCCCC--CCCCCCeeeecCCceEEecCCCCC
Q psy5025 261 HPCIT--QPCGSGSCVPLYDGYKCVCTQSCK 289 (533)
Q Consensus 261 ~~C~~--~pCngg~C~~~~~~~~C~C~~g~~ 289 (533)
+.|.. .+|. ..|++...+|.|.|++||.
T Consensus 2 dEC~~~~~~C~-~~C~nt~Gsy~C~C~~Gy~ 31 (55)
T 2jkh_L 2 KLCSLDNGDCD-QFCHEEQNSVVCSCARGYT 31 (55)
T ss_dssp CCTTTGGGGCS-SEEEEETTEEEEECCTTEE
T ss_pred ccccCCCCCcC-cEeEcCCCCeEEeCCCCCE
Confidence 35653 4573 2899999999999999996
No 183
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=87.24 E-value=0.38 Score=52.63 Aligned_cols=40 Identities=28% Similarity=0.601 Sum_probs=30.6
Q ss_pred CCCCCCCCCC-----CeeeeCCCCceecCCCCCC---CCCccccccccc
Q psy5025 46 KCNKTPCEHG-----GKCITTPGSSYCLCPLGFT---GDLCQTRLDLQV 86 (533)
Q Consensus 46 ~C~~~pC~Ng-----gtC~~~~~~y~C~C~~g~~---G~~Ce~~~~~~~ 86 (533)
.|..++|.++ .+|++..++|.|.|++||. |+.|+ ++++|.
T Consensus 291 ~C~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~~~~~~C~-dideC~ 338 (699)
T 1n7d_A 291 ECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQ 338 (699)
T ss_dssp SCCCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCCCSSSCCC-CCCCCS
T ss_pred ccccccccccccCcCCCcccCCCCcEEeCCCCeEcCCCCccc-CccccC
Confidence 3555566543 5899999999999999998 88998 566553
No 184
>4azz_A Levanase; hydrolase; 1.70A {Bacillus subtilis}
Probab=86.65 E-value=0.13 Score=45.42 Aligned_cols=74 Identities=11% Similarity=0.172 Sum_probs=44.0
Q ss_pred CCeEEEEeccCCCCCeEEEEEE--CCEEEEEEEcCCceEEEeeCceeecCCCeEEEEEEEeeeeeecCCcccccCCcchh
Q psy5025 350 SSGLILWTGSSQSKDFLALGIH--NGYAHVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKI 427 (533)
Q Consensus 350 ~~g~ll~~~~~~~~~~l~l~l~--~g~l~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~~~~~~~~~~~~~~~~~~ 427 (533)
..|++|.... ...++..+.+. ++.+.+.-...+....+.....++..|+||+|+|..
T Consensus 61 ~~Gi~fR~~~-d~~~~Y~~~i~~~~~~~~l~~~~~G~~~~l~~~~~~~~~g~w~~l~I~~-------------------- 119 (172)
T 4azz_A 61 AGALMFRSDK-DAKNGYLANVDAKHDLVKFFKFENGAASVIAEYKTPIDVNKKYHLKTEA-------------------- 119 (172)
Confidence 4466666522 22345555554 334443211111112222234567899999999999
Q ss_pred hhhhhhhccccccCcEEEEEECCceeeeE
Q psy5025 428 EFKCLSIQRLHRTGKQCLIRIDTDYSMQS 456 (533)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~l~vD~~~~~~~ 456 (533)
.+..++++||+..+...
T Consensus 120 ------------~G~~i~~~vnG~~v~~~ 136 (172)
T 4azz_A 120 ------------EGDRFKIYLDDRLVIDA 136 (172)
Confidence 99999999999766553
No 185
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=85.71 E-value=0.41 Score=35.21 Aligned_cols=35 Identities=29% Similarity=0.685 Sum_probs=26.8
Q ss_pred CCCCCCC--CCCCCCeeeeCCC-CceecCCCCC----CCCCccc
Q psy5025 44 EDKCNKT--PCEHGGKCITTPG-SSYCLCPLGF----TGDLCQT 80 (533)
Q Consensus 44 ~d~C~~~--pC~NggtC~~~~~-~y~C~C~~g~----~G~~Ce~ 80 (533)
+++|..+ .|+ ..|++..+ +|.|.|+.|| .|+.|..
T Consensus 5 ~~eC~~~nggC~--h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d 46 (69)
T 1kli_L 5 QLICVNENGGCE--QYCSDHTGTKRSCRCHEGYSLLADGVSCTP 46 (69)
T ss_dssp CCCTTSGGGGCS--SEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred cccccCCCCCcC--CEeEcCCCCCEEEeCCCCCeECCCCCcccC
Confidence 5667642 465 47999998 8999999999 4778875
No 186
>3rsj_A BONT/F; clostridium botulinum type F, ganglioside binding site, GD1A; HET: NGA GAL SIA; 2.00A {Clostridium botulinum} PDB: 3fuq_A
Probab=85.38 E-value=24 Score=34.61 Aligned_cols=130 Identities=11% Similarity=0.051 Sum_probs=74.9
Q ss_pred ceeeEEEEEEEeCCCC---------eEEEEeccCCCCCeEEEEEECCEEEEEEE-cCCceEEEeeCc------eeecCCC
Q psy5025 336 GYEFNIDMRIKTSSSS---------GLILWTGSSQSKDFLALGIHNGYAHVMYN-LGNGEVLLENNQ------TKINNGV 399 (533)
Q Consensus 336 ~~~~~i~~~~rt~~~~---------g~ll~~~~~~~~~~l~l~l~~g~l~~~~~-~g~~~~~~~~~~------~~~~dg~ 399 (533)
...++|+|++|..+-. .++=... ....=-.++|.++.+....- ..+....+.+.. ..+- |.
T Consensus 66 ~~nfSiSFWvRi~k~~~~~nl~n~ytii~~wp--~NNwGW~i~~~~n~~iWtliD~ng~~~~i~fry~~~~~~~dyi-n~ 142 (413)
T 3rsj_A 66 YQNFSISFWVRIPKYFNKVNLNNEYTIIDCIR--NNNSGWKISLNYNKIIWTLQDTAGNNQKLVFNYTQMISISDYI-NK 142 (413)
T ss_dssp SCCEEEEEEEECCCCCSGGGTTCCEEEEEEEE--TTTEEEEEEEETTEEEEEEECTTSCEEEEEEECCSBSSSCSST-TS
T ss_pred ccceEEEEEEEcCCcccccccccccceeccee--ccCccceEEecCCceEEEEEcCCCCeeEEEEeecccCCccccc-cc
Confidence 4568999999997532 1121111 11222478888776665544 333444444321 1233 99
Q ss_pred eEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEecCCcceeeccCCceEEcCCCCc
Q psy5025 400 WHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDI 479 (533)
Q Consensus 400 wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~lGg~~~~ 479 (533)
|++|++..+. .+. ..|+|+|..+....-.+ ......+..+.+|....
T Consensus 143 W~hVTIT~dr------------------------------lg~-~~IYINGklv~~~~i~~-L~~I~~sn~I~fg~~~~- 189 (413)
T 3rsj_A 143 WIFVTITNNR------------------------------LGN-SRIYINGNLIDEKSISN-LGDIHVSDNILFKIVGC- 189 (413)
T ss_dssp EEEEEEEECT------------------------------TSE-EEEEETTEEEEEEECTT-CCCCCCCSEEEEEEESC-
T ss_pred eEEEEEEecC------------------------------CCC-eeEEECCEEecceehhh-ccccccccceEEeeecc-
Confidence 9999999921 333 59999999887754331 11222334455553222
Q ss_pred ccccccccccCceeeEEEEEEcCceEEeecc
Q psy5025 480 EELTRSKYHHSFKGWISNLILSNDYQVKLPL 510 (533)
Q Consensus 480 ~~~~~~~~~~~f~GCi~~l~i~~~~~l~~~~ 510 (533)
...+.|+|++|+| -+..|+-.+
T Consensus 190 --------~~~~n~~Idd~~I-fdKeLt~~E 211 (413)
T 3rsj_A 190 --------NDTRYVGIRYFKV-FDTELGKTE 211 (413)
T ss_dssp --------CSSCEEEEEEEEE-ESSCCCHHH
T ss_pred --------cCcceEEEEEEEE-EcccCCHHH
Confidence 1258999999999 666665433
No 187
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=84.32 E-value=0.7 Score=50.47 Aligned_cols=44 Identities=27% Similarity=0.707 Sum_probs=35.2
Q ss_pred ceee----cCCCC-CCCCC-CCCCCCCCeeeeCCCCceecCCCCCCC----CCccc
Q psy5025 35 IKGR----SKECL-EDKCN-KTPCEHGGKCITTPGSSYCLCPLGFTG----DLCQT 80 (533)
Q Consensus 35 ~~G~----~~~C~-~d~C~-~~pC~NggtC~~~~~~y~C~C~~g~~G----~~Ce~ 80 (533)
..|| +..|+ +++|. ..+|. .+|++..++|.|.|++||.+ +.|..
T Consensus 320 ~~G~~~~~~~~C~dideC~~~~~C~--~~C~n~~g~y~C~C~~G~~~~~~~~~C~~ 373 (699)
T 1n7d_A 320 PDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLDPHTKACKA 373 (699)
T ss_dssp CSSSCCCSSSCCCCCCCCSSSSSCT--TTCCBCSSCBCCCCCSSCBCCSSCCCCBC
T ss_pred CCCeEcCCCCcccCccccCCCCccc--cccccCCCCeeeeeecccccCCCCCcccc
Confidence 4566 45787 88997 67896 59999999999999999974 56764
No 188
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=81.29 E-value=0.72 Score=40.21 Aligned_cols=29 Identities=24% Similarity=0.568 Sum_probs=25.6
Q ss_pred CC-CCCeeeecC--CceEE-ecCCCCCcCcccc
Q psy5025 267 PC-GSGSCVPLY--DGYKC-VCTQSCKESHLTE 295 (533)
Q Consensus 267 pC-ngg~C~~~~--~~~~C-~C~~g~~G~~c~~ 295 (533)
|| |+++|.... ..++| .|+.+|.|..|+.
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~ 34 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCEL 34 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSCE
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCcC
Confidence 79 999998865 46999 7999999999986
No 189
>2nyy_A Botulinum neurotoxin type A; neurotoxin, FAB, protein antibody complex, toxin- system complex; 2.61A {Clostridium botulinum} PDB: 2nz9_A 3bta_A 3v0a_A* 3v0b_A 3v0c_A 3zus_A 3zur_A
Probab=80.77 E-value=19 Score=40.26 Aligned_cols=126 Identities=10% Similarity=-0.008 Sum_probs=74.4
Q ss_pred ceeEEEEEEEecCCC--------eeEEEccccCCCCCCeEEEEEECCEEEEEEEcCCCc-eEEEe----ecccc--CCCc
Q psy5025 106 SLLDLTIVFKAIEPN--------GILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA-ATLRS----SNPIS--LGEW 170 (533)
Q Consensus 106 ~~~~ls~~FrT~~~d--------GlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~-~~v~s----~~~ln--Dg~W 170 (533)
..++++||.|...-+ -.++-.-. . +.--.+.+.++.|...+....+. ..+.. ...+. -++|
T Consensus 938 ~nFSIsFWvRipk~~~~~~~~neyTIIg~~~--n--NsGW~Is~~~n~LIWtl~Dsng~~k~I~f~y~~~~nisdyiNkW 1013 (1295)
T 2nyy_A 938 ENFSTSFWIRIPKYFNSISLNNEYTIINCME--N--NSGWKVSLNYGEIIWTLQDTQEIKQRVVFKYSQMINISDYINRW 1013 (1295)
T ss_dssp SEEEEEEEEECCCCCSGGGGGCCEEEEEEEE--T--TEEEEEEEETTEEEEEEECSSSCEEEEEEECCSBSSSCSSTTSC
T ss_pred CceEEEEEEEcCCcccccccCCcceEEEeec--C--CCCcEEEECCCeEEEEEecCCCccceEEEecccccchhhccCce
Confidence 478999999974221 12221111 1 22256677888888887754343 22322 12333 2899
Q ss_pred EEEEEEEE-CCEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEECcEEcc
Q psy5025 171 HKLRLTRT-GRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELN 245 (533)
Q Consensus 171 h~V~v~~~-~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in~~~l~ 245 (533)
|+|+|+.. .+...+.|||.........+ ...+.....+-+|-.... ...+.++|++++|-+++++
T Consensus 1014 ~fVTITndRlgna~IYINGkLi~~~~I~~-l~nI~~sd~Isfk~~g~n---------D~~~~i~Id~l~IfnkeLt 1079 (1295)
T 2nyy_A 1014 IFVTITNNRLNNSKIYINGRLIDQKPISN-LGNIHASNNIMFKLDGCR---------DTHRYIWIKYFNLFDKELN 1079 (1295)
T ss_dssp EEEEEEEETTSEEEEEETTEEEEEEECTT-CCCCCCCSEEEEEEESCC---------CTTCEEEEEEEEEESSCCC
T ss_pred EEEEEEEcCCCceeEEECCEEeecceecc-cCCcccCceEEEEeccCC---------CCccceeEeeEEEecCcCC
Confidence 99999998 67779999997655432221 122223344555422111 1468999999999887776
No 190
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=80.70 E-value=0.32 Score=49.13 Aligned_cols=34 Identities=21% Similarity=0.622 Sum_probs=0.0
Q ss_pred CCCC--CCC-CCCeeeecCCceEEecCCCCCcCcccceee
Q psy5025 262 PCIT--QPC-GSGSCVPLYDGYKCVCTQSCKESHLTEVMC 298 (533)
Q Consensus 262 ~C~~--~pC-ngg~C~~~~~~~~C~C~~g~~G~~c~~~~~ 298 (533)
.|.. .|| |||+|.+.. .|.|++||.|..|+.-.+
T Consensus 365 ~CD~~t~~C~ngg~C~~~~---~C~C~~G~~G~~Ce~c~C 401 (426)
T 3zyj_B 365 VCDNELLHCQNGGTCHNNV---RCLCPAAYTGILCEKLRC 401 (426)
T ss_dssp ----------------------------------------
T ss_pred ccccCcccCCCCCCcCCCC---CCcCCCCCcCCCCcCCCC
Confidence 4543 699 999999876 999999999999886544
No 191
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=80.18 E-value=0.71 Score=31.88 Aligned_cols=28 Identities=32% Similarity=0.807 Sum_probs=22.8
Q ss_pred CCCCCCeeeeCCC-CceecCCCCCC----CCCccc
Q psy5025 51 PCEHGGKCITTPG-SSYCLCPLGFT----GDLCQT 80 (533)
Q Consensus 51 pC~NggtC~~~~~-~y~C~C~~g~~----G~~Ce~ 80 (533)
.|+ ..|++..+ +|.|.|+.||. |+.|+.
T Consensus 8 gC~--~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d 40 (53)
T 2bz6_L 8 GCE--QYCSDHTGTKRSCRCHEGYSLLADGVSCTP 40 (53)
T ss_dssp GCS--SEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred CcC--CEeEcCCCCCEEeeCCCCCEECCCCCcccC
Confidence 465 36999998 79999999994 778875
No 192
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=79.59 E-value=1 Score=39.34 Aligned_cols=21 Identities=24% Similarity=0.733 Sum_probs=18.7
Q ss_pred CC-CCCeeeecCCceEEecCCCCC
Q psy5025 267 PC-GSGSCVPLYDGYKCVCTQSCK 289 (533)
Q Consensus 267 pC-ngg~C~~~~~~~~C~C~~g~~ 289 (533)
+| + .|++...+|.|.|++||.
T Consensus 136 ~C~~--~C~n~~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 136 TCDH--HCHNHLGGFYCSCRAGYV 157 (170)
T ss_dssp SSSS--EEEEETTEEEEECCTTEE
T ss_pred ccCC--ccccCCCCEEEeCCCCcE
Confidence 38 5 799999999999999997
No 193
>3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A*
Probab=79.45 E-value=16 Score=39.17 Aligned_cols=59 Identities=17% Similarity=0.167 Sum_probs=44.5
Q ss_pred eEEEEEE-CCEEEEEEEcCCceEEEeeCceeecCCCeEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcE
Q psy5025 365 FLALGIH-NGYAHVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQ 443 (533)
Q Consensus 365 ~l~l~l~-~g~l~~~~~~g~~~~~~~~~~~~~~dg~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (533)
.+.+.|. +|.+.+.-+.++..+... ....+..++||+|+|.. .+..
T Consensus 565 gy~~~i~~~G~~~l~~~~~~~~vLa~-g~~~~~~~~w~~L~l~~--------------------------------~G~~ 611 (656)
T 3zr5_A 565 GVFFWIFANGSYRVTADLGGWITYAS-GHADVTAKRWYTLTLGI--------------------------------KGYF 611 (656)
T ss_dssp EEEEEEETTTEEEEEEETTCCSEEEE-EECSCCTTCEEEEEEEE--------------------------------ETTE
T ss_pred eEEEEEEcCCEEEEEEecCCeEEEEE-EEecCCCCceEEEEEEE--------------------------------ECCE
Confidence 4455554 999888876654333333 34589999999999999 9999
Q ss_pred EEEEECCceeeeE
Q psy5025 444 CLIRIDTDYSMQS 456 (533)
Q Consensus 444 ~~l~vD~~~~~~~ 456 (533)
++..|||......
T Consensus 612 i~~~ldG~~v~~~ 624 (656)
T 3zr5_A 612 AFGMLNGTILWKN 624 (656)
T ss_dssp EEEEETTEEEEEE
T ss_pred EEEEECCEEEEEE
Confidence 9999999877654
No 194
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=79.25 E-value=2.6 Score=40.75 Aligned_cols=36 Identities=31% Similarity=0.724 Sum_probs=24.9
Q ss_pred CCCCCCCCCCCCC---eeeeCC------CCceecCCCCCC----CCCcc
Q psy5025 44 EDKCNKTPCEHGG---KCITTP------GSSYCLCPLGFT----GDLCQ 79 (533)
Q Consensus 44 ~d~C~~~pC~Ngg---tC~~~~------~~y~C~C~~g~~----G~~Ce 79 (533)
.+.|..++|.||+ .|.... .+|+|.||.||. |+.|.
T Consensus 267 ~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 267 VNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 315 (316)
T ss_dssp CCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred cccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence 4677765433433 788764 589999999983 66775
No 195
>3rsj_A BONT/F; clostridium botulinum type F, ganglioside binding site, GD1A; HET: NGA GAL SIA; 2.00A {Clostridium botulinum} PDB: 3fuq_A
Probab=77.11 E-value=59 Score=31.97 Aligned_cols=126 Identities=10% Similarity=0.068 Sum_probs=72.7
Q ss_pred ceeEEEEEEEecCC-CeeE------EEccccCCCCCCeEEEEEECCEEEEEEEc-CCCceEEEee-------ccccCCCc
Q psy5025 106 SLLDLTIVFKAIEP-NGIL------LYNGHRADGVGDFIALYLNDRYVDFTFDL-GTGAATLRSS-------NPISLGEW 170 (533)
Q Consensus 106 ~~~~ls~~FrT~~~-dGlL------l~~~~~~~~~~~fl~l~L~~G~l~~~~~~-g~~~~~v~s~-------~~lnDg~W 170 (533)
..++++|++|..+- +|+= +...-+.. +---.+.|+++.+...+-. .+....+... ..+- |.|
T Consensus 67 ~nfSiSFWvRi~k~~~~~nl~n~ytii~~wp~N--NwGW~i~~~~n~~iWtliD~ng~~~~i~fry~~~~~~~dyi-n~W 143 (413)
T 3rsj_A 67 QNFSISFWVRIPKYFNKVNLNNEYTIIDCIRNN--NSGWKISLNYNKIIWTLQDTAGNNQKLVFNYTQMISISDYI-NKW 143 (413)
T ss_dssp CCEEEEEEEECCCCCSGGGTTCCEEEEEEEETT--TEEEEEEEETTEEEEEEECTTSCEEEEEEECCSBSSSCSST-TSE
T ss_pred cceEEEEEEEcCCcccccccccccceecceecc--CccceEEecCCceEEEEEcCCCCeeEEEEeecccCCccccc-cce
Confidence 47899999997443 2111 11111111 3335778887776665543 3333344322 1123 999
Q ss_pred EEEEEEEEC-CEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEECcEEcc
Q psy5025 171 HKLRLTRTG-RHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELN 245 (533)
Q Consensus 171 h~V~v~~~~-~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in~~~l~ 245 (533)
++|+++... +...|.|||......... ..........+.+|..... ..+.|+|+++++-++.++
T Consensus 144 ~hVTIT~drlg~~~IYINGklv~~~~i~-~L~~I~~sn~I~fg~~~~~----------~~~n~~Idd~~IfdKeLt 208 (413)
T 3rsj_A 144 IFVTITNNRLGNSRIYINGNLIDEKSIS-NLGDIHVSDNILFKIVGCN----------DTRYVGIRYFKVFDTELG 208 (413)
T ss_dssp EEEEEEECTTSEEEEEETTEEEEEEECT-TCCCCCCCSEEEEEEESCC----------SSCEEEEEEEEEESSCCC
T ss_pred EEEEEEecCCCCeeEEECCEEecceehh-hccccccccceEEeeeccc----------CcceEEEEEEEEEcccCC
Confidence 999999862 346899999775544332 1222223344555533322 258899999999888876
No 196
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=75.75 E-value=1.6 Score=30.75 Aligned_cols=28 Identities=25% Similarity=0.727 Sum_probs=22.6
Q ss_pred CCCCCCeeeeCC-CCceecCCCCC----CCCCccc
Q psy5025 51 PCEHGGKCITTP-GSSYCLCPLGF----TGDLCQT 80 (533)
Q Consensus 51 pC~NggtC~~~~-~~y~C~C~~g~----~G~~Ce~ 80 (533)
.|+ ..|++.. ++|.|.|++|| .|+.|+.
T Consensus 8 gC~--~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d 40 (59)
T 2wph_E 8 RCE--QFCKNSADNKVVCSCTEGYRLAENQKSCEP 40 (59)
T ss_dssp GCS--SEEEECSTTCEEEECCTTEEECTTSSCEEE
T ss_pred CcC--CEeEeCCCCCEEeeCCCCcEECCCCCcccC
Confidence 465 3799998 59999999999 4778875
No 197
>1epw_A Bontoxilysin B, botulinum neurotoxin type B; zinc, metalloprotease, transmembrane, hydrolase; 1.90A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 1f31_A* 1g9a_A* 1g9b_A* 1g9c_A* 1g9d_A* 1i1e_A* 1s0b_A 1s0c_A 1s0d_A 1s0e_A 1s0f_A 1s0g_A 2np0_A 3zuq_A 2etf_A 2xhl_A 1z0h_A 2nm1_A 3g94_A 1f82_A ...
Probab=75.36 E-value=40 Score=37.75 Aligned_cols=126 Identities=10% Similarity=0.040 Sum_probs=75.7
Q ss_pred ceeEEEEEEEecCC-----C------eeEEEccccCCCCCCeEEEEEECCEEEEEEEcCCCc-eEEEe----ecccc--C
Q psy5025 106 SLLDLTIVFKAIEP-----N------GILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA-ATLRS----SNPIS--L 167 (533)
Q Consensus 106 ~~~~ls~~FrT~~~-----d------GlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~-~~v~s----~~~ln--D 167 (533)
..++++||.|...- . -.++-.-. . +.--.+.+.++.|...+....+. ..+-. ...+. -
T Consensus 923 ~nFSIsFWiRipk~~~~~it~y~~nEyTiIg~~~--n--NsGW~Isi~~n~lIWtl~D~ng~~k~I~f~y~~~~nisdyi 998 (1290)
T 1epw_A 923 LDFSVSFWIRIPKYKNDGIQNYIHNEYTIINCMK--N--NSGWKISIRGNRIIWTLIDINGKTKSVFFEYNIREDISEYI 998 (1290)
T ss_dssp CCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEE--T--TEEEEEEEETTEEEEEEECTTCCEEEEEEECCSSCSSCSST
T ss_pred cceeEEEEEEcCCccccccccccCCCceEEEEec--C--CCCcEEEECCCeEEEEEecCCCcceeEEEecccccchhhcc
Confidence 37899999998544 1 22332211 1 22356777888888877754332 22322 13334 2
Q ss_pred CCcEEEEEEEECCEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEECcEEcc
Q psy5025 168 GEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELN 245 (533)
Q Consensus 168 g~Wh~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~in~~~l~ 245 (533)
++||+|+++..-+.+.+.|||.........+ ...+.....+-+|-+... ...+.++|+++++-+++++
T Consensus 999 NkW~fVTItndlg~~~IYING~Li~~~~I~~-L~dI~ss~~I~fglvn~~---------D~~~~i~Id~f~IfnkeLt 1066 (1290)
T 1epw_A 999 NRWFFVTITNNLNNAKIYINGKLESNTDIKD-IREVIANGEIIFKLDGDI---------DRTQFIWMKYFSIFNTELS 1066 (1290)
T ss_dssp TSCEEEEEEECSSEEEEEETTEEEEEEECSS-CCCCCCCSEEEEEEEESC---------CTTCCEEEEEEEEESSCCC
T ss_pred CceEEEEEEecCCceEEEECCEEeechhhhh-hhceeecceEEEEeccCC---------CCCceeeEeeEEEecCcCC
Confidence 8999999999988999999997654432211 111222233444422211 1568899999999887776
No 198
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=70.21 E-value=2.1 Score=48.10 Aligned_cols=36 Identities=22% Similarity=0.481 Sum_probs=31.4
Q ss_pred CCCCCCCC-CCCeeeecCCceEEecCCCCCcCcccce
Q psy5025 261 HPCITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEV 296 (533)
Q Consensus 261 ~~C~~~pC-ngg~C~~~~~~~~C~C~~g~~G~~c~~~ 296 (533)
++|.-+|| |+|+|+...+...|.|+++|.|..|+..
T Consensus 498 ~~c~C~PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~~ 534 (913)
T 3t5o_A 498 DPCQCAPCPNNGRPTLSGTECLCVCQSGTYGENCEKQ 534 (913)
T ss_dssp CGGGSCCBTTTBEEEEETTEEEEECCTTBCSTTSCCB
T ss_pred ccccCCCCCCCCEeecCCCceEEEccCCccccCccCc
Confidence 35666799 9999999889999999999999999764
No 199
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=68.36 E-value=2 Score=42.25 Aligned_cols=35 Identities=23% Similarity=0.754 Sum_probs=21.0
Q ss_pred CCCC-CCCCCCCCeeeeCCCCceecCCCCCC----CCCcccc
Q psy5025 45 DKCN-KTPCEHGGKCITTPGSSYCLCPLGFT----GDLCQTR 81 (533)
Q Consensus 45 d~C~-~~pC~NggtC~~~~~~y~C~C~~g~~----G~~Ce~~ 81 (533)
|+|. ...|.+ .|++..++|.|.|+.||. |+.|...
T Consensus 2 ~ec~~~~~C~~--~C~n~~g~~~C~C~~g~~l~~d~~~C~~~ 41 (349)
T 3v64_C 2 NECAEEGYCSQ--GCTNSEGAFQCWCEAGYELRPDRRSCKAL 41 (349)
T ss_dssp -------CCSS--EECCC---CCEECCTTEEECTTSSCEEES
T ss_pred cccCCCCCCcC--eeecCCCCeEEECCCCccCCCCCCccccc
Confidence 5675 346764 899999999999999993 6778653
No 200
>4azz_A Levanase; hydrolase; 1.70A {Bacillus subtilis}
Probab=70.28 E-value=1.2 Score=39.10 Aligned_cols=29 Identities=17% Similarity=0.231 Sum_probs=25.6
Q ss_pred eccccCCCcEEEEEEEECCEEEEEEcCcc
Q psy5025 162 SNPISLGEWHKLRLTRTGRHAYLQVDRFP 190 (533)
Q Consensus 162 ~~~lnDg~Wh~V~v~~~~~~~~L~VD~~~ 190 (533)
..++..|+||+++|+..+..++++||+..
T Consensus 104 ~~~~~~g~w~~l~I~~~G~~i~~~vnG~~ 132 (172)
T 4azz_A 104 KTPIDVNKKYHLKTEAEGDRFKIYLDDRL 132 (172)
Confidence 45677899999999999999999999954
No 201
>3v0a_B NTNH; botulinum neurotoxin, toxin, neurotoxin associated protein, progenitor toxin complex, VHH bound interlocked complex; HET: MES; 2.70A {Clostridium botulinum} PDB: 3v0b_B
Probab=63.72 E-value=59 Score=35.54 Aligned_cols=83 Identities=13% Similarity=0.222 Sum_probs=54.3
Q ss_pred ceeEEEEEEEecCCC---eeEEEccccCCCCCCeEEEEEECCEEEEEEEcCCCc-eEEEeeccccCCCcEEEEEEEE--C
Q psy5025 106 SLLDLTIVFKAIEPN---GILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA-ATLRSSNPISLGEWHKLRLTRT--G 179 (533)
Q Consensus 106 ~~~~ls~~FrT~~~d---GlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~-~~v~s~~~lnDg~Wh~V~v~~~--~ 179 (533)
..++++||.|...-+ -.++-.-. . +.--.+.+.++.|...+....+. ..+..+ .+.+++||+|+++.+ +
T Consensus 902 nnFSISFWVRipk~~~~eyTIIg~~~--n--NsGW~ISf~~n~LIWtl~DsnGn~knI~f~-dy~~NkWyfITISvDRLG 976 (1196)
T 3v0a_B 902 NSFSIYFWLRNLGKDTIKSKLIGSKE--D--NCGWEIYFQDTGLVFNMIDSNGNEKNIYLS-DVSNNSWHYITISVDRLK 976 (1196)
T ss_dssp CCEEEEEEEEECCCCCSCEEEEEEEE--T--TEEEEEEEETTEEEEEEECTTCCEEEEEEC-SCCSSSCEEEEEEEETTT
T ss_pred cceEEEEEEEcCCcCCccceEEEeec--C--CCCcEEEECCCeEEEEEEcCCCcccceEec-cccCCcEEEEEEEEcCCC
Confidence 478999999975433 22332211 1 22255677888888888754443 233333 788899999999877 4
Q ss_pred CEEEEEEcCccCce
Q psy5025 180 RHAYLQVDRFPSSQ 193 (533)
Q Consensus 180 ~~~~L~VD~~~~~~ 193 (533)
..+.+.|||.....
T Consensus 977 nalkIYINGkLv~~ 990 (1196)
T 3v0a_B 977 EQLLIFIDDNLVAN 990 (1196)
T ss_dssp TEEEEEETTEEEEE
T ss_pred ceeEEEECCEEeec
Confidence 55599999976544
No 202
>3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A*
Probab=63.53 E-value=61 Score=34.65 Aligned_cols=55 Identities=20% Similarity=0.210 Sum_probs=42.0
Q ss_pred eEEEEEE-CCEEEEEEEcCCCceEEEe-eccccCCCcEEEEEEEECCEEEEEEcCccC
Q psy5025 136 FIALYLN-DRYVDFTFDLGTGAATLRS-SNPISLGEWHKLRLTRTGRHAYLQVDRFPS 191 (533)
Q Consensus 136 fl~l~L~-~G~l~~~~~~g~~~~~v~s-~~~lnDg~Wh~V~v~~~~~~~~L~VD~~~~ 191 (533)
++.+.|. +|.+.+.-+.+. ...+.+ ...+..++||+++|+..+..+...||+...
T Consensus 565 gy~~~i~~~G~~~l~~~~~~-~~vLa~g~~~~~~~~w~~L~l~~~G~~i~~~ldG~~v 621 (656)
T 3zr5_A 565 GVFFWIFANGSYRVTADLGG-WITYASGHADVTAKRWYTLTLGIKGYFAFGMLNGTIL 621 (656)
T ss_dssp EEEEEEETTTEEEEEEETTC-CSEEEEEECSCCTTCEEEEEEEEETTEEEEEETTEEE
T ss_pred eEEEEEEcCCEEEEEEecCC-eEEEEEEEecCCCCceEEEEEEEECCEEEEEECCEEE
Confidence 4555555 899988776653 444443 357899999999999999999999999553
No 203
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=63.42 E-value=2.7 Score=28.60 Aligned_cols=18 Identities=17% Similarity=0.462 Sum_probs=16.3
Q ss_pred eeeecCCceEEecCCCCC
Q psy5025 272 SCVPLYDGYKCVCTQSCK 289 (533)
Q Consensus 272 ~C~~~~~~~~C~C~~g~~ 289 (533)
.|++...+|.|.|++||.
T Consensus 11 ~C~n~~gs~~C~C~~Gy~ 28 (51)
T 1kig_L 11 FCREERSEVRCSCAHGYV 28 (51)
T ss_dssp CCCEETTEECCCCCTTEE
T ss_pred EeEcCCCCeEEeCCCCcE
Confidence 688888999999999996
No 204
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=63.05 E-value=3.6 Score=28.21 Aligned_cols=18 Identities=17% Similarity=0.442 Sum_probs=15.9
Q ss_pred eeeecCC-ceEEecCCCCC
Q psy5025 272 SCVPLYD-GYKCVCTQSCK 289 (533)
Q Consensus 272 ~C~~~~~-~~~C~C~~g~~ 289 (533)
.|++... +|.|.|++||.
T Consensus 12 ~C~n~~ggs~~C~C~~Gy~ 30 (53)
T 2bz6_L 12 YCSDHTGTKRSCRCHEGYS 30 (53)
T ss_dssp EEEEETTTEEEEECCTTEE
T ss_pred EeEcCCCCCEEeeCCCCCE
Confidence 6888887 79999999996
No 205
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=61.55 E-value=4.3 Score=39.34 Aligned_cols=25 Identities=32% Similarity=0.854 Sum_probs=18.6
Q ss_pred eeeeCCC--CceecCCCCC----CCCCcccc
Q psy5025 57 KCITTPG--SSYCLCPLGF----TGDLCQTR 81 (533)
Q Consensus 57 tC~~~~~--~y~C~C~~g~----~G~~Ce~~ 81 (533)
.|..... +|+|.||.|| .|+.|..-
T Consensus 280 ~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~ 310 (318)
T 3sov_A 280 LCLMSPVKPFYQCACPTGVKLLENGKTCKDG 310 (318)
T ss_dssp EEEECSSTTSEEEECSTTCCBCTTSSCBCC-
T ss_pred EEecCCCCCCeEEECCCCCEECCCCCCCCCC
Confidence 6777654 7999999998 46777653
No 206
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=60.98 E-value=4.8 Score=41.60 Aligned_cols=39 Identities=28% Similarity=0.796 Sum_probs=30.7
Q ss_pred CCCCC---CCCCCCCCeeeeCC-CCceecCCCCCC--CCCccccc
Q psy5025 44 EDKCN---KTPCEHGGKCITTP-GSSYCLCPLGFT--GDLCQTRL 82 (533)
Q Consensus 44 ~d~C~---~~pC~NggtC~~~~-~~y~C~C~~g~~--G~~Ce~~~ 82 (533)
++.|. .+||.-++.|+... +.|.|.|+.||. |..|..+.
T Consensus 18 ~~~c~~~~~~~c~~~a~C~~~~~~~~~c~C~~G~ag~G~~c~~D~ 62 (551)
T 3fby_A 18 QRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGNGILCGRDT 62 (551)
T ss_dssp CCBCTTSSBCCCCTTEEEEECTTSCEEEEECTTEESSSSSCEECT
T ss_pred cccCCCCCCCCCCCCCeeEeCCCCCEecCCCCCCCCCCcccCccC
Confidence 45674 47999999999986 568999999995 55787654
No 207
>2zzj_A Glucuronan lyase A; beta-jelly roll; HET: CIT; 1.80A {Trichoderma reesei}
Probab=57.41 E-value=42 Score=30.74 Aligned_cols=66 Identities=20% Similarity=0.235 Sum_probs=41.4
Q ss_pred eEEEEEECCEEEEEEEcCC-------ceEEEeeCceeecCCCeEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccc
Q psy5025 365 FLALGIHNGYAHVMYNLGN-------GEVLLENNQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRL 437 (533)
Q Consensus 365 ~l~l~l~~g~l~~~~~~g~-------~~~~~~~~~~~~~dg~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (533)
.+++.+....|..++..+. ...........|.-|+||.|.|+. ||...
T Consensus 109 ~~~~~v~G~~l~~r~~sgt~~~p~~~~~~~~~~~l~~v~~G~Wh~iVihv----------------------kWs~d--- 163 (238)
T 2zzj_A 109 STMIWIQNNQLYSRYVNGHYRQPNCGRNIVTRPNLATVSAGAWHRVVLQI----------------------KWASD--- 163 (238)
T ss_dssp EEEEEEETTEEEEEEEEECCBTTBCCEEEEEEEEEEECCTTSCEEEEEEE----------------------EECSS---
T ss_pred ceeEEEeCCEEEEEeecccccccCcCccceeccccccccCCceEEEEEEE----------------------EEeCC---
Confidence 4556666666665554332 111111124578999999998887 44432
Q ss_pred cccCcEEEEEECCceeeeEe
Q psy5025 438 HRTGKQCLIRIDTDYSMQSI 457 (533)
Q Consensus 438 ~~~~~~~~l~vD~~~~~~~~ 457 (533)
....+.|.+||..+....
T Consensus 164 --~~Gf~~vW~dG~~v~~~~ 181 (238)
T 2zzj_A 164 --NTGYFKIWFDGAKVHEEY 181 (238)
T ss_dssp --TTEEEEEEETTEEEEEEE
T ss_pred --CCcEEEEEECCEEEEeec
Confidence 567899999999876543
No 208
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=57.34 E-value=1.2 Score=44.36 Aligned_cols=19 Identities=21% Similarity=0.590 Sum_probs=16.7
Q ss_pred CceecCCCCCCCCCccccc
Q psy5025 64 SSYCLCPLGFTGDLCQTRL 82 (533)
Q Consensus 64 ~y~C~C~~g~~G~~Ce~~~ 82 (533)
.|.|.|..||.|..|+...
T Consensus 396 ~F~C~Cy~gw~G~~C~~~~ 414 (424)
T 2pe4_A 396 EFKCRCYPGWQAPWCERKS 414 (424)
T ss_dssp HEEEEECTTBCTTTTCSBC
T ss_pred CcEeeccCCCCcccccCCC
Confidence 4789999999999999753
No 209
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=55.46 E-value=8.4 Score=32.80 Aligned_cols=23 Identities=35% Similarity=0.775 Sum_probs=19.1
Q ss_pred CCCCCeeeecCCceEEecCCCCCc
Q psy5025 267 PCGSGSCVPLYDGYKCVCTQSCKE 290 (533)
Q Consensus 267 pCngg~C~~~~~~~~C~C~~g~~G 290 (533)
+| +..|.+...+|.|.|++||..
T Consensus 127 ~C-~~~C~n~~g~~~C~C~~Gy~l 149 (159)
T 1nzi_A 127 PC-SHFCNNFIGGYFCSCPPEYFL 149 (159)
T ss_dssp CS-SSEEEEETTEEEEECCTTCEE
T ss_pred CC-CCcccCcCCCEEEecCCCcEE
Confidence 46 347998889999999999983
No 210
>3vuo_A NTNHA; protection of botulinum neurotoxin, botulinum neurotoxin, to; 3.90A {Clostridium botulinum}
Probab=55.36 E-value=93 Score=34.94 Aligned_cols=86 Identities=14% Similarity=0.074 Sum_probs=58.5
Q ss_pred eeeEEEEEEEeCCCC----eEEEEeccCCCCCeEEEEEECCEEEEEEEcCCc-eEEEeeCceeecCCCeEEEEEEEeeee
Q psy5025 337 YEFNIDMRIKTSSSS----GLILWTGSSQSKDFLALGIHNGYAHVMYNLGNG-EVLLENNQTKINNGVWHRLTVHRNFMV 411 (533)
Q Consensus 337 ~~~~i~~~~rt~~~~----g~ll~~~~~~~~~~l~l~l~~g~l~~~~~~g~~-~~~~~~~~~~~~dg~wH~v~~~~~~~~ 411 (533)
..|+|+||+|..+.+ -++=.. ....=-.++|.++.+...+.-.++ ...+.++. .-..+||.|+++-++
T Consensus 899 ~nFSISFWiRi~k~~~~~~~iI~~~---~nNSGWkIsl~~n~IIwtLqD~ngn~k~i~fs~--~i~NkW~FVTITnnR-- 971 (1196)
T 3vuo_A 899 NNFTICFWLRFTGKDDDKTRLIGNK---VNNCGWEIYFEDNGLVFEIIDSNGNQESVYLSN--VINNNWYYISISVDR-- 971 (1196)
T ss_dssp CCEEEEEEEEECCCCSSCEEEEEEE---CSSCEEEEEEETTEEEEEEECTTCCEEEEEECS--CTTSCCEEEEEEEET--
T ss_pred cceeEEEEEEccCCCCCceeEeeec---ccCCCcEEEEeCCcEEEEEEecCCceeeEEEeE--eecceEEEEEEEecc--
Confidence 459999999997532 122222 123456788999999988865444 34444443 233889999999721
Q ss_pred eecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEe
Q psy5025 412 VMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSI 457 (533)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~ 457 (533)
-+..+.|+|+|.......
T Consensus 972 ----------------------------L~~s~~IYING~Li~~~~ 989 (1196)
T 3vuo_A 972 ----------------------------LKDQLLIFINDKNVANVS 989 (1196)
T ss_dssp ----------------------------TTTEEEEEETTEEEEEEE
T ss_pred ----------------------------cCceeEEEECCEEecchh
Confidence 567889999999887753
No 211
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=49.35 E-value=8.7 Score=36.37 Aligned_cols=35 Identities=23% Similarity=0.696 Sum_probs=26.2
Q ss_pred CCCCCCC---CCCCCCeeeeCCCCceecCCCCC----CCCCccc
Q psy5025 44 EDKCNKT---PCEHGGKCITTPGSSYCLCPLGF----TGDLCQT 80 (533)
Q Consensus 44 ~d~C~~~---pC~NggtC~~~~~~y~C~C~~g~----~G~~Ce~ 80 (533)
.|+|..+ .|+ -.|.+..++|+|.|+.|| .++.|..
T Consensus 2 ~~eC~~~~~~~C~--~~C~~~~~~~~C~C~~G~~l~~d~~sC~p 43 (283)
T 3f1s_B 2 KNECHPERTDGCQ--HFCLPGQESYTCSCAQGYRLGEDHKQCVP 43 (283)
T ss_dssp -CCCCSSCSSSCS--SBCCCCTTSCCCBCCTTEEECTTSSCEEE
T ss_pred CCccCCCCCCCCC--CEeeCCCCCeEecCCCCcccCCCCCcccc
Confidence 3667643 665 579999999999999998 3667775
No 212
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=47.70 E-value=11 Score=36.08 Aligned_cols=31 Identities=16% Similarity=0.398 Sum_probs=20.4
Q ss_pred CCCCCCCCC-CC---CeeeecC------CceEEecCCCCCc
Q psy5025 260 AHPCITQPC-GS---GSCVPLY------DGYKCVCTQSCKE 290 (533)
Q Consensus 260 ~~~C~~~pC-ng---g~C~~~~------~~~~C~C~~g~~G 290 (533)
.++|..++| || -.|.... .+|+|.||.||.-
T Consensus 267 ~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l 307 (316)
T 1ijq_A 267 VNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLL 307 (316)
T ss_dssp CCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEE
T ss_pred cccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEE
Confidence 356766543 32 2677654 4799999999853
No 213
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=47.05 E-value=7 Score=38.68 Aligned_cols=28 Identities=36% Similarity=0.961 Sum_probs=22.4
Q ss_pred CCCCCCeeeeCCCCceecCCCCCCCCC--ccccc
Q psy5025 51 PCEHGGKCITTPGSSYCLCPLGFTGDL--CQTRL 82 (533)
Q Consensus 51 pC~NggtC~~~~~~y~C~C~~g~~G~~--Ce~~~ 82 (533)
.|...|.|+. -.|.|..||.|.. |....
T Consensus 197 ~CsGhG~C~~----g~C~Cd~G~~g~d~~C~~~~ 226 (387)
T 2ddu_A 197 YCSGHGDCIS----GVCFCDLGYTAAQGTCVSNT 226 (387)
T ss_dssp GGGGSEEEET----TEEEECTTEEEETTEEEESS
T ss_pred ccCCCceecC----CeEEecCCcccCCCcccccc
Confidence 5777799966 3899999999975 88664
No 214
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=46.51 E-value=12 Score=27.16 Aligned_cols=18 Identities=17% Similarity=0.442 Sum_probs=15.9
Q ss_pred eeeecCC-ceEEecCCCCC
Q psy5025 272 SCVPLYD-GYKCVCTQSCK 289 (533)
Q Consensus 272 ~C~~~~~-~~~C~C~~g~~ 289 (533)
.|++... +|.|.|+.||.
T Consensus 18 ~C~n~~g~s~~C~C~~Gy~ 36 (69)
T 1kli_L 18 YCSDHTGTKRSCRCHEGYS 36 (69)
T ss_dssp EEEEETTTEEEEECCTTEE
T ss_pred EeEcCCCCCEEEeCCCCCe
Confidence 6888887 89999999985
No 215
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=44.08 E-value=2.9 Score=41.74 Aligned_cols=19 Identities=16% Similarity=0.398 Sum_probs=16.6
Q ss_pred ceEEecCCCCCcCccccee
Q psy5025 279 GYKCVCTQSCKESHLTEVM 297 (533)
Q Consensus 279 ~~~C~C~~g~~G~~c~~~~ 297 (533)
.|.|.|-.||.|..|++..
T Consensus 396 ~F~C~Cy~gw~G~~C~~~~ 414 (424)
T 2pe4_A 396 EFKCRCYPGWQAPWCERKS 414 (424)
T ss_dssp HEEEEECTTBCTTTTCSBC
T ss_pred CcEeeccCCCCcccccCCC
Confidence 4899999999999998653
No 216
>3zyp_A CIP1; metal binding protein, calcium-binding, CBM-containing, beta sandwich jelly roll, carbohydrate-binding; HET: NAG; 1.50A {Hypocrea jecorina}
Probab=43.35 E-value=1.5e+02 Score=26.33 Aligned_cols=86 Identities=9% Similarity=0.117 Sum_probs=49.0
Q ss_pred eeeEEEEEEEeCC----CCeEEEEe-ccCCCCCeEEEEEECCEEEEEEEcCCceEEEee-------CceeecCCCeEEEE
Q psy5025 337 YEFNIDMRIKTSS----SSGLILWT-GSSQSKDFLALGIHNGYAHVMYNLGNGEVLLEN-------NQTKINNGVWHRLT 404 (533)
Q Consensus 337 ~~~~i~~~~rt~~----~~g~ll~~-~~~~~~~~l~l~l~~g~l~~~~~~g~~~~~~~~-------~~~~~~dg~wH~v~ 404 (533)
.+..+++.+|... ....|+-+ .......-+.+.-..+.+.... +........ ...++..|+||.|+
T Consensus 65 ~~~y~r~~v~~~~~~~~~~~t~~~~~~~~~~~~~~r~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~s~~l~~g~W~cvE 142 (218)
T 3zyp_A 65 GDVYVRAWIRLQTALGSNHVTFIIMPDTAQGGKHLRIGGQSQVLDYNR--ESDDATLPDLSPNGIASTVTLPTGAFQCFE 142 (218)
T ss_dssp SSEEEEEEEEESSCCCSSCEEEEEEEBGGGTTCEEEEEEETTEEEEEE--TTTCCEESCSSHHHHHHSCCCCCSSCEEEE
T ss_pred ceEEEEEEEEecccCCCCcEEEEEeecCCCCCceEEeecccceeeEEE--cCCccccCcccccccccceeecCCcEEEEE
Confidence 3456777777653 22334333 2222345555555666644433 222222210 22368899999999
Q ss_pred EEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeee
Q psy5025 405 VHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQ 455 (533)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~ 455 (533)
+... ....+.+.||+..+..
T Consensus 143 ~~~~-------------------------------~~G~~~~W~DG~~v~~ 162 (218)
T 3zyp_A 143 YHLG-------------------------------TDGTIETWLNGSLIPG 162 (218)
T ss_dssp EEEC-------------------------------SSSCEEEEETTEECGG
T ss_pred EEEC-------------------------------CCCeEEEEECCEEeee
Confidence 8871 4568999999988754
No 217
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=43.03 E-value=32 Score=33.43 Aligned_cols=25 Identities=28% Similarity=0.797 Sum_probs=20.4
Q ss_pred eeeeCCCCceecCCCCCC---CCCcccc
Q psy5025 57 KCITTPGSSYCLCPLGFT---GDLCQTR 81 (533)
Q Consensus 57 tC~~~~~~y~C~C~~g~~---G~~Ce~~ 81 (533)
.|+....+|+|.||.||. |+.|..+
T Consensus 317 lCl~~~~~~~C~C~~g~~~~d~~~C~~~ 344 (349)
T 3v64_C 317 LCLPSGQNYTCACPTGFRKINSHACALE 344 (349)
T ss_dssp EEECCTTSCEEECCTTEEEETTTEEEEG
T ss_pred EeecCCCCCeeECCCCCcCCCCCcccch
Confidence 688888999999999994 5667654
No 218
>3ffz_A Botulinum neurotoxin type E; botulinum neurotoxin serotype E, botulism, domain organization, endopeptidase, translocation, hydrolase; 2.65A {Clostridium botulinum}
Probab=41.61 E-value=3.3e+02 Score=30.63 Aligned_cols=89 Identities=13% Similarity=0.161 Sum_probs=57.8
Q ss_pred ceeeEEEEEEEeCCCC----------eEEEEeccCCCCCeEEEEEECCEEEEEEEcCCc-eEEEeeC--c-eeecC--CC
Q psy5025 336 GYEFNIDMRIKTSSSS----------GLILWTGSSQSKDFLALGIHNGYAHVMYNLGNG-EVLLENN--Q-TKINN--GV 399 (533)
Q Consensus 336 ~~~~~i~~~~rt~~~~----------g~ll~~~~~~~~~~l~l~l~~g~l~~~~~~g~~-~~~~~~~--~-~~~~d--g~ 399 (533)
...|+|+||+|....+ .+|=..+.. ..=-.++++++.+...+.-.++ ...+.++ . ..+.| .+
T Consensus 912 ~~nFSIsFWiRipk~~~~~in~~nEytII~~~~~n--NsGWkI~l~~n~iiwtl~D~ngn~k~i~f~y~~~~~isdyiNk 989 (1252)
T 3ffz_A 912 YKNFSISFWVRIPNYDNKIVNVNNEYTIINCMRDN--NSGWKVSLNHNEIIWTLQDNAGINQKLAFNYGNANGISDYINK 989 (1252)
T ss_dssp CCCCEEEEEEECCCCCSTTTCCCCCEEEEEEEETT--TEEEEEEEETTEEEEEEECSSSCEEEEEEECCCCSBCCSSTTS
T ss_pred ccceeEEEEEEcCCcCccccccCCceeEEeeccCC--CCCcEEEEecCeEEEEEEeCCCCeeeEEEecccccchhhhhcc
Confidence 3568999999996652 444454222 3445789999998888765444 3333332 1 22222 79
Q ss_pred eEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEe
Q psy5025 400 WHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSI 457 (533)
Q Consensus 400 wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~ 457 (533)
||.|+++-++ .+. ..|+|||.......
T Consensus 990 W~fITITnnR------------------------------L~~-~~IyINg~Li~~~~ 1016 (1252)
T 3ffz_A 990 WIFVTITNDR------------------------------LGD-SKLYINGNLIDQKS 1016 (1252)
T ss_dssp CEEEEEEECT------------------------------TSE-EEEEETTEEEEEEE
T ss_pred eEEEEEEecc------------------------------Ccc-ceEEECCEEeeccc
Confidence 9999999832 334 49999999877643
No 219
>3u1x_A Putative glycosyl hydrolase; glycosyl hydrolysis, carbohydrate metabolism,, structural GE joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Parabacteroides distasonis}
Probab=41.38 E-value=36 Score=31.27 Aligned_cols=89 Identities=10% Similarity=0.046 Sum_probs=52.2
Q ss_pred eeEEEEEEEeC--CCCeEEEEeccCCC-----CCeEEEEEECCEEEE------EE----EcCCceE-EE--eeCceeecC
Q psy5025 338 EFNIDMRIKTS--SSSGLILWTGSSQS-----KDFLALGIHNGYAHV------MY----NLGNGEV-LL--ENNQTKINN 397 (533)
Q Consensus 338 ~~~i~~~~rt~--~~~g~ll~~~~~~~-----~~~l~l~l~~g~l~~------~~----~~g~~~~-~~--~~~~~~~~d 397 (533)
.|.+.|.||.. ..+|+.|+...... ..-..+.|.|+.-+- .. ....+.+ .. .........
T Consensus 80 dF~L~lE~k~~~~~NSGI~~~~~~~~~~~~~~~~G~EvQIlD~~~~~~~~~~~~~~~~~~~~~GslY~~~~p~~~~~~p~ 159 (236)
T 3u1x_A 80 NFQIKWDWKIGAQGNSGFLYHVQEGPKYKAPFETGPEYQLIDDDNYPWVSETGKEGLEDWQKTGCNYAMYVPETKQVNPP 159 (236)
T ss_dssp SEEEEEEEEECTTCEEEEEEEECCSTTCSCGGGTSCEEEEECTTCCCCBCTTSCBSCCGGGSTTCBTTTBCCSSCCCCCT
T ss_pred cEEEEEEEEeCCCCCcEEEEEecCCccccccccceEEEEEecCCCCCccccccccccCccccccccccccCCccccCCCC
Confidence 46677777765 46788887653210 012567776542111 00 0001110 00 011234678
Q ss_pred CCeEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEec
Q psy5025 398 GVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSIS 458 (533)
Q Consensus 398 g~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~~ 458 (533)
|+|.+..|.. .+..+++.|+|..+.....
T Consensus 160 geWN~~~I~~--------------------------------~g~~i~v~lNG~~V~~~~~ 188 (236)
T 3u1x_A 160 GEWNSSMVLY--------------------------------KDGYVEHWLNGEKLFSFQE 188 (236)
T ss_dssp TSCEEEEEEE--------------------------------ETTEEEEEETTEEEEEEET
T ss_pred CceEEEEEEE--------------------------------ECCEEEEEECCEEEEEEec
Confidence 9999999999 8999999999998877553
No 220
>3n7l_A Neurotoxin; HCR/D-SA, ganglioside binding loop; 2.00A {Clostridium botulinum} PDB: 3azw_A 3azv_A 3n7m_A 4fvv_A* 3n7k_A 3r4s_A* 3r4u_A
Probab=40.70 E-value=2.7e+02 Score=27.16 Aligned_cols=86 Identities=14% Similarity=0.150 Sum_probs=55.7
Q ss_pred ceeeEEEEEEEeCCCCe------EEEEeccCCCCCeEEEEEECCEEEEEEEcCCc-eEEEeeCc------eeecCCCeEE
Q psy5025 336 GYEFNIDMRIKTSSSSG------LILWTGSSQSKDFLALGIHNGYAHVMYNLGNG-EVLLENNQ------TKINNGVWHR 402 (533)
Q Consensus 336 ~~~~~i~~~~rt~~~~g------~ll~~~~~~~~~~l~l~l~~g~l~~~~~~g~~-~~~~~~~~------~~~~dg~wH~ 402 (533)
-..|+|+|++|..+... +|=... ...=-.+++.++.+.+.+.-..+ ...+.++. ..+ .+||.
T Consensus 70 y~nFSIsFWiRi~k~~~n~~nytII~~~~---nNsGWkI~~~~n~iiwtL~D~ngn~k~i~fsY~~~~~isdy--NkW~f 144 (424)
T 3n7l_A 70 YESFSISFWIRINKWVSNLPGYTIIDSVK---NNSGWSIGIISNFLVFTLKQNENSEQDINFSYDISKNAAGY--NKWFF 144 (424)
T ss_dssp TTEEEEEEEEEEETCCTTCCCEEEEEEES---SSCEEEEEEETTEEEEEEEEETTEEEEEEEECCGGGCTTCC--CSCEE
T ss_pred ccceEEEEEEEccccccCCCccEEEeeec---CCCceEEEEecCcEEEEEEeCCCCeEEEEEecccccccccc--ccEEE
Confidence 34689999999975322 222321 24556789999998888764433 33343331 124 89999
Q ss_pred EEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEe
Q psy5025 403 LTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSI 457 (533)
Q Consensus 403 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~ 457 (533)
|+++-+. . +...|.|+|.......
T Consensus 145 ITITnnr------------------------------l-~n~~IyINg~Li~~~~ 168 (424)
T 3n7l_A 145 VTITTNM------------------------------M-GNMMIYINGKLIDTIK 168 (424)
T ss_dssp EEEEEET------------------------------T-SEEEEEETTEEEEEEE
T ss_pred EEEEccc------------------------------c-ccceEEECCEEecchh
Confidence 9999832 3 3448999999877643
No 221
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=39.90 E-value=32 Score=36.65 Aligned_cols=35 Identities=26% Similarity=0.804 Sum_probs=25.8
Q ss_pred CCCCCCC--CCCCCCeeeeCC-CCceecCCCCC----CCCCccc
Q psy5025 44 EDKCNKT--PCEHGGKCITTP-GSSYCLCPLGF----TGDLCQT 80 (533)
Q Consensus 44 ~d~C~~~--pC~NggtC~~~~-~~y~C~C~~g~----~G~~Ce~ 80 (533)
.++|..+ .|. -.|++.. ++|+|.|+.|| .|+.|..
T Consensus 265 ~n~C~~~ng~C~--~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~ 306 (628)
T 4a0p_A 265 WNECASSNGHCS--HLCLAVPVGGFVCGCPAHYSLNADNRTCSA 306 (628)
T ss_dssp CCTTTTTGGGCS--SEEEEETTTEEEEECSTTCEECTTSSCEEC
T ss_pred ceEeccCCCCcc--hhhhcCCCCCeeEEcCCCcEecccCCcCcc
Confidence 4666542 453 4788888 89999999998 4677875
No 222
>3imm_A Putative secreted glycosylhydrolase; YP_001301887.1, putative glycosyl hydrolase; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Probab=39.47 E-value=44 Score=29.80 Aligned_cols=87 Identities=17% Similarity=0.292 Sum_probs=47.2
Q ss_pred ceeEEEEEEEecC--CCeeEEEccccCCCCCCeEEEEEECCEEE----EEEEcCCCc-eEEE---eecccc-CCCcEEEE
Q psy5025 106 SLLDLTIVFKAIE--PNGILLYNGHRADGVGDFIALYLNDRYVD----FTFDLGTGA-ATLR---SSNPIS-LGEWHKLR 174 (533)
Q Consensus 106 ~~~~ls~~FrT~~--~dGlLl~~~~~~~~~~~fl~l~L~~G~l~----~~~~~g~~~-~~v~---s~~~ln-Dg~Wh~V~ 174 (533)
..+.|.++||... .+|+.|...........-+.++|.+..-. ..-....+. ..+. ...... .|+|.+..
T Consensus 47 ~dF~L~~e~k~~~~~NSGI~~r~~~~~~~~~~G~EvQild~~~~~~~~~~~~~~~GslY~~~~~~~~~~~kp~GeWN~~~ 126 (201)
T 3imm_A 47 ENFELDLDFKTDVGTNSGVVVYCTDTKDWIPNSVEIQIADDHCEKWGNGKPYEKCGAIYGHLGAVQDKVVKKPGEWNHMR 126 (201)
T ss_dssp CSEEEEEEEEECTTCEEEEEEEESCSSSCTTSSEEEEEECTTCCTTTTCCGGGSTTSBTTTBCCSSSCCSCCTTSEEEEE
T ss_pred ccEEEEEEEEECCCCccEEEEEecCCCCCcCcEEEEEEEcCCCCccccCCCCCceEeeccccCccccccCCCCCeeEEEE
Confidence 4689999999753 46666554322110111245555543210 000000111 0111 112233 69999999
Q ss_pred EEEECCEEEEEEcCccCc
Q psy5025 175 LTRTGRHAYLQVDRFPSS 192 (533)
Q Consensus 175 v~~~~~~~~L~VD~~~~~ 192 (533)
|+..+.++++.+||....
T Consensus 127 I~~~g~~i~v~lNG~~V~ 144 (201)
T 3imm_A 127 IKCAGQHIMVILNGKKVT 144 (201)
T ss_dssp EEEETTEEEEEETTEEEE
T ss_pred EEEECCEEEEEECCEEEE
Confidence 999999999999997644
No 223
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=37.12 E-value=17 Score=38.11 Aligned_cols=37 Identities=32% Similarity=0.665 Sum_probs=28.8
Q ss_pred CCCCCCCCCCCCeeeeCCCCceecCCCCCCCCCcccc
Q psy5025 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 45 d~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~ 81 (533)
+.|.-.||+|++.....+..=.|.|+.||.|..|+..
T Consensus 465 ~~c~c~pC~~~g~~~~~gt~C~c~C~~G~~G~~C~~~ 501 (554)
T 3ojy_A 465 NACRCGPCFNNGVPILEGTSCRCQCRLGSLGAACEQT 501 (554)
T ss_dssp CGGGSCCCTTTCCEEEETTEEEECCCSSCCSSSCC--
T ss_pred ccccccccCCCCEEcCCCCcccccCCCCCCCCCcccC
Confidence 4465569999998866667778889999999999975
No 224
>2vxr_A Botulinum neurotoxin type G; hydrolase, ganglioside, protease, recepto secreted, binding domain, metalloprotease; 1.90A {Clostridium botulinum} PDB: 3mpp_G
Probab=35.16 E-value=3.5e+02 Score=26.89 Aligned_cols=88 Identities=14% Similarity=0.127 Sum_probs=56.8
Q ss_pred ceeeEEEEEEEeCCC------------CeEEEEeccCCCCCeEEEEEECCEEEEEEEcCCc-eEEEeeC---ceeecC--
Q psy5025 336 GYEFNIDMRIKTSSS------------SGLILWTGSSQSKDFLALGIHNGYAHVMYNLGNG-EVLLENN---QTKINN-- 397 (533)
Q Consensus 336 ~~~~~i~~~~rt~~~------------~g~ll~~~~~~~~~~l~l~l~~g~l~~~~~~g~~-~~~~~~~---~~~~~d-- 397 (533)
...|+|+|++|..+. ..+|=.... ..=-.++|..+.+...+.-.++ ...+.++ ...++|
T Consensus 113 y~nFSIsFWlRipk~~~~~i~~y~~nEytII~~~~n---NsGWkIsl~~n~iIwtL~D~ngn~k~I~f~Y~~~~~isDyi 189 (482)
T 2vxr_A 113 FDNFSINFWVRTPKYNNNDIQTYLQNEYTIISCIKN---DSGWKVSIKGNRIIWTLIDVNAKSKSIFFEYSIKDNISDYI 189 (482)
T ss_dssp SCCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEET---TEEEEEEEETTEEEEEEECTTSCEEEEEEECCSCCSSCSST
T ss_pred ccceEEEEEEEcCCcccchhhcccCCceEEEEEecC---CCccEEEEecCcEEEEEEeCCCCeeEEEEecccccchhhhh
Confidence 346899999999765 223334421 3445788998888888765444 3333333 123343
Q ss_pred CCeEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEe
Q psy5025 398 GVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSI 457 (533)
Q Consensus 398 g~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~ 457 (533)
.+||.|+++-.+ .+ ...|.|+|..+....
T Consensus 190 NkW~fVTITnnR------------------------------L~-n~~IYINg~Li~~~~ 218 (482)
T 2vxr_A 190 NKWFSITITNDR------------------------------LG-NANIYINGSLKKSEK 218 (482)
T ss_dssp TSCEEEEEEECT------------------------------TS-EEEEEETTEEEEEEE
T ss_pred cceEEEEEEccc------------------------------cc-cceEEECCEEecchh
Confidence 699999999832 33 348999999877643
No 225
>3u1x_A Putative glycosyl hydrolase; glycosyl hydrolysis, carbohydrate metabolism,, structural GE joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Parabacteroides distasonis}
Probab=33.89 E-value=53 Score=30.11 Aligned_cols=32 Identities=9% Similarity=-0.028 Sum_probs=26.4
Q ss_pred cccCCCcEEEEEEEECCEEEEEEcCccCceee
Q psy5025 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQIL 195 (533)
Q Consensus 164 ~lnDg~Wh~V~v~~~~~~~~L~VD~~~~~~~~ 195 (533)
....|+|.+..|+..+..+++.|||.......
T Consensus 156 ~~p~geWN~~~I~~~g~~i~v~lNG~~V~~~~ 187 (236)
T 3u1x_A 156 VNPPGEWNSSMVLYKDGYVEHWLNGEKLFSFQ 187 (236)
T ss_dssp CCCTTSCEEEEEEEETTEEEEEETTEEEEEEE
T ss_pred CCCCCceEEEEEEEECCEEEEEECCEEEEEEe
Confidence 34569999999999999999999997655433
No 226
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=31.68 E-value=28 Score=34.78 Aligned_cols=37 Identities=27% Similarity=0.648 Sum_probs=27.7
Q ss_pred CCCCCCCCCCCC-eeee----------------CCCCceec-CCCCCCCCCcccc
Q psy5025 45 DKCNKTPCEHGG-KCIT----------------TPGSSYCL-CPLGFTGDLCQTR 81 (533)
Q Consensus 45 d~C~~~pC~Ngg-tC~~----------------~~~~y~C~-C~~g~~G~~Ce~~ 81 (533)
+.|.+-+|.+.+ .|.- ...+..|. |..+++|++||.-
T Consensus 320 ~~C~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~nt~G~~CErC 374 (403)
T 2y38_A 320 NECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINCERC 374 (403)
T ss_dssp CCCCCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCCSSEESTTSCEE
T ss_pred ccccccccCCCCcccccCcccccccccccccccCCCCCCCCCCcCcCcCCCCCcC
Confidence 468877786555 4851 13578996 9999999999975
No 227
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=31.02 E-value=25 Score=36.40 Aligned_cols=26 Identities=27% Similarity=0.595 Sum_probs=22.1
Q ss_pred CCCC-CCCeeeecCC-ceEEecCCCCCc
Q psy5025 265 TQPC-GSGSCVPLYD-GYKCVCTQSCKE 290 (533)
Q Consensus 265 ~~pC-ngg~C~~~~~-~~~C~C~~g~~G 290 (533)
.+|| .++.|+.... .|.|.|+.||.|
T Consensus 26 ~~~c~~~a~C~~~~~~~~~c~C~~G~ag 53 (551)
T 3fby_A 26 PSECHEHADCVLERDGSRSCVCAVGWAG 53 (551)
T ss_dssp BCCCCTTEEEEECTTSCEEEEECTTEES
T ss_pred CCCCCCCCeeEeCCCCCEecCCCCCCCC
Confidence 3799 8999998754 589999999988
No 228
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=30.85 E-value=20 Score=37.51 Aligned_cols=37 Identities=27% Similarity=0.751 Sum_probs=30.2
Q ss_pred CCCCCCCCCCCeeeeCCCCceecCCCCCCCCCccccc
Q psy5025 46 KCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL 82 (533)
Q Consensus 46 ~C~~~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~~ 82 (533)
.|.-.||+|++........-.|.|+.++.|.-|+...
T Consensus 448 ~c~C~pC~~~~~~~~~gt~C~c~C~~g~~G~~c~~~~ 484 (537)
T 3ojy_B 448 SCHCAPCQGNGVPVLKGSRCDCICPVGSQGLACEVSY 484 (537)
T ss_dssp GGGSCCCSTTCEEEEETTEEEEECCTTEETGGGCEES
T ss_pred cccCCCCCcCCEEecCCCceeccCCCCcccccccCCc
Confidence 3444499999998887788888999999999998753
No 229
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=30.71 E-value=21 Score=33.84 Aligned_cols=28 Identities=25% Similarity=0.656 Sum_probs=20.6
Q ss_pred CCCCCCCeeeeCCCCceecCCCCCCCCCcccc
Q psy5025 50 TPCEHGGKCITTPGSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 50 ~pC~NggtC~~~~~~y~C~C~~g~~G~~Ce~~ 81 (533)
.+|...|+|.- ..|.|.+||+|+.|+-.
T Consensus 196 ~~C~g~G~~~C----G~C~C~~g~~G~~CeC~ 223 (280)
T 2p26_A 196 SLCHGKGFLEC----GICRCDTGYIGKNCECQ 223 (280)
T ss_dssp TGGGGSEEEET----TEEEECTTEESTTSCEE
T ss_pred CccCCCCeECC----CceeCCCCCcCCcceec
Confidence 34655566653 37999999999999843
No 230
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=30.60 E-value=48 Score=35.35 Aligned_cols=77 Identities=16% Similarity=0.085 Sum_probs=46.4
Q ss_pred eeecCCCeEEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceee-eEe-cCCcceeeccCCc
Q psy5025 393 TKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSM-QSI-SGGKFEQLNTDSG 470 (533)
Q Consensus 393 ~~~~dg~wH~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~-~~~-~~~~~~~l~~~~~ 470 (533)
....-++-|+|.+.. .+++..++|||+.+. ... ........ .-+.
T Consensus 551 ~~we~~~~~qv~l~l--------------------------------~~~~~s~yvdg~~~~~~~~~~~~~~~~~-~ish 597 (648)
T 1ms9_A 551 GSWEMGKRYHVVLTM--------------------------------ANKIGSVYIDGEPLEGSGQTVVPDERTP-DISH 597 (648)
T ss_dssp SCCCTTCEEEEEEEE--------------------------------ETTEEEEEETTEECTTCCEECSCSSCCC-CCCE
T ss_pred ccccCCcceEEEEEE--------------------------------eCCcEEEEECCEEecCCcccccccCCCc-ccce
Confidence 346667889999998 666999999999762 221 11211222 2356
Q ss_pred eEEcCCCCcccccccccccCceeeEEEEEEcCceEEeec
Q psy5025 471 LYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLP 509 (533)
Q Consensus 471 l~lGg~~~~~~~~~~~~~~~f~GCi~~l~i~~~~~l~~~ 509 (533)
+||||-..... ...-.=-++||.+ -.++|+-.
T Consensus 598 fy~g~~~~~~~------~~~~~vtv~nv~l-ynr~l~~~ 629 (648)
T 1ms9_A 598 FYVGGYKRSGM------PTDSRVTVNNVLL-YNRQLNAE 629 (648)
T ss_dssp EEESSCSCTTS------CCCCCEEEEEEEE-ESSCCCHH
T ss_pred EEEcCCCCCCc------ccCCCEEEEEeeE-ecCCCCHH
Confidence 99998643321 1122235677877 55666543
No 231
>3sek_C Follistatin-related protein 3; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, follistatin domain (FSD); HET: NAG; 2.40A {Homo sapiens} PDB: 2kcx_A
Probab=30.59 E-value=31 Score=31.08 Aligned_cols=32 Identities=25% Similarity=0.681 Sum_probs=24.1
Q ss_pred CCCCCCCCCC-CCCeeeecCCceEEecCCCCCc
Q psy5025 259 CAHPCITQPC-GSGSCVPLYDGYKCVCTQSCKE 290 (533)
Q Consensus 259 C~~~C~~~pC-ngg~C~~~~~~~~C~C~~g~~G 290 (533)
|.++|....| .|++|+...+...|.|++.+..
T Consensus 60 ckd~C~~v~C~~G~~C~~~~~~p~CvC~~~C~~ 92 (209)
T 3sek_C 60 CKDSCDGVECGPGKACRMLGGRPRCECAPDCSG 92 (209)
T ss_dssp SCSSSTTCCCCTTEEEEC----CEEEECCCCSS
T ss_pred CcCcCCCCcCCCCCCCcccCCeeeccCCCcCCC
Confidence 4689999999 9999998877889999976654
No 232
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=30.35 E-value=54 Score=34.80 Aligned_cols=24 Identities=33% Similarity=0.873 Sum_probs=19.8
Q ss_pred CeeeeCCCCceecCCCCC----CCCCcc
Q psy5025 56 GKCITTPGSSYCLCPLGF----TGDLCQ 79 (533)
Q Consensus 56 gtC~~~~~~y~C~C~~g~----~G~~Ce 79 (533)
-.|.+..++|+|.||.|| .|+.|.
T Consensus 590 ~~C~~~~~~~~C~C~~g~~l~~d~~~C~ 617 (619)
T 3s94_A 590 HLCLYRPQGLRCACPIGFELISDMKTCI 617 (619)
T ss_dssp SEEEEETTEEEEECCTTCEECSSTTCEE
T ss_pred HhhccCCCCeEEECCCCCEECCCCCcCC
Confidence 478888899999999998 366675
No 233
>3pme_A Type C neurotoxin; structural genomics, seattle structural genomics center for infectious disease, ssgcid, botulinum neurotoxin; 1.56A {Clostridium botulinum} PDB: 4f83_A* 3ogg_A 3n7j_A 3obr_A 3obt_A* 3rmx_A 3rmy_A
Probab=29.93 E-value=4e+02 Score=25.94 Aligned_cols=88 Identities=17% Similarity=0.109 Sum_probs=56.6
Q ss_pred ceeeEEEEEEEeCCC-------CeEEEEeccCCCCCeEEEEEECCEEEEEEEcCCc-eEEEeeC--c-eeecC--CCeEE
Q psy5025 336 GYEFNIDMRIKTSSS-------SGLILWTGSSQSKDFLALGIHNGYAHVMYNLGNG-EVLLENN--Q-TKINN--GVWHR 402 (533)
Q Consensus 336 ~~~~~i~~~~rt~~~-------~g~ll~~~~~~~~~~l~l~l~~g~l~~~~~~g~~-~~~~~~~--~-~~~~d--g~wH~ 402 (533)
...|+|+|++|..+. ..+|=.... ..=-.+++.++.+.+.+.-.++ ...+.++ . ..++| .+||.
T Consensus 66 y~nFSIsFWlRipk~~~n~~neytII~s~~n---NsGWkIsl~~n~iIwtL~D~ngn~k~I~fsY~~~~~isdyiNkW~f 142 (420)
T 3pme_A 66 YENSSVSFWIKISKDLTNSHNEYTIINSIKQ---NSGWKLCIRNGNIEWILQDINRKYKSLIFDYSESLSHTGYTNKWFF 142 (420)
T ss_dssp GTEEEEEEEEEECHHHHTCCSEEEEEEEEET---TEEEEEEEETTEEEEEEECTTSCEEEEEEECSTTTCTTSCTTSCEE
T ss_pred ccceEEEEEEEcccccccCCcceEEEEEecC---CCceEEEEecCcEEEEEEeCCCCeeEEEEeehhccchhhhccceEE
Confidence 346899999999532 223333321 3445789999999988865444 3333333 1 22333 69999
Q ss_pred EEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEe
Q psy5025 403 LTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSI 457 (533)
Q Consensus 403 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~ 457 (533)
|++.-.+ .+. ..|.|+|.......
T Consensus 143 ITITnnR------------------------------L~n-~~IyINg~Li~~~~ 166 (420)
T 3pme_A 143 VTITNNI------------------------------MGY-MKLYINGELKQSER 166 (420)
T ss_dssp EEEEEET------------------------------TSE-EEEEETTEEEEEEE
T ss_pred EEEEccc------------------------------ccc-ceEEECCEEecchh
Confidence 9999832 333 49999999887754
No 234
>1lr7_A Follistatin, FS1; heparin-binding, cystine-rich, sucrose octasulphate, hormone/growth factor complex; HET: SO4; 1.50A {Rattus norvegicus} SCOP: g.3.11.3 g.68.1.1 PDB: 1lr8_A* 1lr9_A
Probab=29.60 E-value=33 Score=25.01 Aligned_cols=27 Identities=26% Similarity=0.789 Sum_probs=22.9
Q ss_pred CCCCCCCCCCCCeeeeCC-CCceecCCC
Q psy5025 45 DKCNKTPCEHGGKCITTP-GSSYCLCPL 71 (533)
Q Consensus 45 d~C~~~pC~NggtC~~~~-~~y~C~C~~ 71 (533)
+.|...+|..|..|+... +...|.|+.
T Consensus 2 ~~C~~~~C~~g~~C~~~~~~~~~C~C~~ 29 (74)
T 1lr7_A 2 ETCENVDCGPGKKCRMNKKNKPRCVCAP 29 (74)
T ss_dssp CCSTTCCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCCCCcCcCCCEEeECCCCCeeecCCC
Confidence 679999999999999965 557999964
No 235
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=28.93 E-value=21 Score=27.87 Aligned_cols=37 Identities=27% Similarity=0.735 Sum_probs=28.9
Q ss_pred CCCCCCCCCCCCeeeeC-CCCceecCCCCCC--CCCcccc
Q psy5025 45 DKCNKTPCEHGGKCITT-PGSSYCLCPLGFT--GDLCQTR 81 (533)
Q Consensus 45 d~C~~~pC~NggtC~~~-~~~y~C~C~~g~~--G~~Ce~~ 81 (533)
-.|...-|...+.|... .+...|.|.+||. |..|...
T Consensus 5 h~C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~ 44 (99)
T 1ob1_C 5 HQCVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVEN 44 (99)
T ss_dssp TCCCSCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEEC
T ss_pred eEeccCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeC
Confidence 35777788888999885 4889999999995 4456665
No 236
>2vu9_A Botulinum neurotoxin A heavy chain; hydrolase, metalloprotease, ganglioside, metal-B toxin, protease, membrane, receptor, secreted; HET: BGC GAL SIA NGA; 1.6A {Clostridium botulinum} PDB: 2vua_A 3fuo_A
Probab=28.71 E-value=4.3e+02 Score=26.02 Aligned_cols=88 Identities=14% Similarity=0.076 Sum_probs=56.1
Q ss_pred ceeeEEEEEEEeCCC---------CeEEEEeccCCCCCeEEEEEECCEEEEEEEcCCc-eEEEeeC--c-eeecC--CCe
Q psy5025 336 GYEFNIDMRIKTSSS---------SGLILWTGSSQSKDFLALGIHNGYAHVMYNLGNG-EVLLENN--Q-TKINN--GVW 400 (533)
Q Consensus 336 ~~~~~i~~~~rt~~~---------~g~ll~~~~~~~~~~l~l~l~~g~l~~~~~~g~~-~~~~~~~--~-~~~~d--g~w 400 (533)
...|+|+|++|..+. ..+|=... . ..=-.|+|+++.+...+.-.++ ...+.++ . ..++| .+|
T Consensus 85 ~~nFSIsFWiRipk~~~~~~~~neytII~~~~-n--NsGWkIsl~~n~iiwtL~D~ngn~k~i~f~Y~~~~~isdyiNkW 161 (444)
T 2vu9_A 85 YENFSTSFWIRIPKYFNSISLNNEYTIINCME-N--NSGWKVSLNYGEIIWTLQDTQEIKQRVVFKYSQMINISDYINRW 161 (444)
T ss_dssp SCCEEEEEEEECCCCCSGGGTTCCEEEEEEEE-T--TEEEEEEEETTEEEEEEECTTSCEEEEEEECCSBSSSCSSTTSC
T ss_pred ccceEEEEEEecCCcccccccCcceEEEEecc-C--CCCcEEEEecCcEEEEEEeCCCCeeEEEEeeccccchhhhhcce
Confidence 456899999999632 22332332 1 3445788998888888765444 3333332 1 22333 799
Q ss_pred EEEEEEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeEe
Q psy5025 401 HRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSI 457 (533)
Q Consensus 401 H~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~~ 457 (533)
|.|+++-.+ .+ ...|.|||.......
T Consensus 162 ~fITITndR------------------------------L~-n~~IyINg~Li~~~~ 187 (444)
T 2vu9_A 162 IFVTITNNR------------------------------LN-NSKIYINGRLIDQKP 187 (444)
T ss_dssp EEEEEEECT------------------------------TS-EEEEEETTEEEEEEE
T ss_pred EEEEEEccc------------------------------cc-ceeEEECCEEeeccc
Confidence 999999832 33 448999999887754
No 237
>3imm_A Putative secreted glycosylhydrolase; YP_001301887.1, putative glycosyl hydrolase; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Probab=27.72 E-value=61 Score=28.83 Aligned_cols=86 Identities=13% Similarity=0.337 Sum_probs=48.8
Q ss_pred eeEEEEEEEeC--CCCeEEEEeccCCC--CCeEEEEEECCEEE------EEEEcCCceEEEee--Cceeec-CCCeEEEE
Q psy5025 338 EFNIDMRIKTS--SSSGLILWTGSSQS--KDFLALGIHNGYAH------VMYNLGNGEVLLEN--NQTKIN-NGVWHRLT 404 (533)
Q Consensus 338 ~~~i~~~~rt~--~~~g~ll~~~~~~~--~~~l~l~l~~g~l~------~~~~~g~~~~~~~~--~~~~~~-dg~wH~v~ 404 (533)
.|.+.|.||.. ..+|+.|....... ..-..+.|.|+.-+ -.-..|+ .+.... ...... .|+|.+..
T Consensus 48 dF~L~~e~k~~~~~NSGI~~r~~~~~~~~~~G~EvQild~~~~~~~~~~~~~~~Gs-lY~~~~~~~~~~~kp~GeWN~~~ 126 (201)
T 3imm_A 48 NFELDLDFKTDVGTNSGVVVYCTDTKDWIPNSVEIQIADDHCEKWGNGKPYEKCGA-IYGHLGAVQDKVVKKPGEWNHMR 126 (201)
T ss_dssp SEEEEEEEEECTTCEEEEEEEESCSSSCTTSSEEEEEECTTCCTTTTCCGGGSTTS-BTTTBCCSSSCCSCCTTSEEEEE
T ss_pred cEEEEEEEEECCCCccEEEEEecCCCCCcCcEEEEEEEcCCCCccccCCCCCceEe-eccccCccccccCCCCCeeEEEE
Confidence 46677777765 45678877653211 11245666543210 0000111 011110 112233 79999999
Q ss_pred EEEeeeeeecCCcccccCCcchhhhhhhhhccccccCcEEEEEECCceeeeE
Q psy5025 405 VHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQS 456 (533)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vD~~~~~~~ 456 (533)
|.. .+..+++.|+|..+...
T Consensus 127 I~~--------------------------------~g~~i~v~lNG~~V~~~ 146 (201)
T 3imm_A 127 IKC--------------------------------AGQHIMVILNGKKVTEM 146 (201)
T ss_dssp EEE--------------------------------ETTEEEEEETTEEEEEE
T ss_pred EEE--------------------------------ECCEEEEEECCEEEEEE
Confidence 999 88999999999988763
No 238
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=27.61 E-value=21 Score=36.33 Aligned_cols=14 Identities=36% Similarity=1.032 Sum_probs=7.2
Q ss_pred eecCCCCCCCCCcc
Q psy5025 66 YCLCPLGFTGDLCQ 79 (533)
Q Consensus 66 ~C~C~~g~~G~~Ce 79 (533)
.|.|.+||.|+.||
T Consensus 459 ~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 459 VCRCGPGWLGSQCE 472 (472)
T ss_dssp EEEECTTC------
T ss_pred ceECcCCCCCCCCC
Confidence 67999999999997
No 239
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=25.80 E-value=37 Score=33.62 Aligned_cols=27 Identities=19% Similarity=0.445 Sum_probs=21.2
Q ss_pred CCeeeeC-CCCceecCCCCCCCCCcccc
Q psy5025 55 GGKCITT-PGSSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 55 ggtC~~~-~~~y~C~C~~g~~G~~Ce~~ 81 (533)
+..|... ..++.|.|..+|.|++|+.-
T Consensus 261 ~s~c~~~~~~~~~C~C~~nt~G~~Ce~C 288 (375)
T 4aqt_A 261 ASECVKNEFDKLMCNCKHNTYGVDCEKC 288 (375)
T ss_dssp CSCEEECTTSCEEECCCTTEESTTSCEE
T ss_pred CcccCCCCCCCeeeeCcCCCcCCCcccC
Confidence 3445433 37888999999999999986
No 240
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=24.04 E-value=41 Score=26.48 Aligned_cols=38 Identities=29% Similarity=0.586 Sum_probs=30.3
Q ss_pred CCCCCCCCCCCCCeeee-CCCCceecCCCCCC--CCCcccc
Q psy5025 44 EDKCNKTPCEHGGKCIT-TPGSSYCLCPLGFT--GDLCQTR 81 (533)
Q Consensus 44 ~d~C~~~pC~NggtC~~-~~~~y~C~C~~g~~--G~~Ce~~ 81 (533)
...|...-|.-++.|.. ..+...|.|.++|. |..|...
T Consensus 10 ~h~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~ 50 (105)
T 1n1i_A 10 AHKCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA 50 (105)
T ss_dssp TTSCCSSCCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC
T ss_pred CcEecCCCCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC
Confidence 35687778888899999 45888999999995 5567665
No 241
>3vuo_A NTNHA; protection of botulinum neurotoxin, botulinum neurotoxin, to; 3.90A {Clostridium botulinum}
Probab=24.03 E-value=8.2e+02 Score=27.64 Aligned_cols=84 Identities=11% Similarity=0.144 Sum_probs=55.6
Q ss_pred ceeEEEEEEEecCC--CeeEEEccccCCCCCCeEEEEEECCEEEEEEEcCCCc-eEEEeeccccCCCcEEEEEEEE--CC
Q psy5025 106 SLLDLTIVFKAIEP--NGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA-ATLRSSNPISLGEWHKLRLTRT--GR 180 (533)
Q Consensus 106 ~~~~ls~~FrT~~~--dGlLl~~~~~~~~~~~fl~l~L~~G~l~~~~~~g~~~-~~v~s~~~lnDg~Wh~V~v~~~--~~ 180 (533)
..++++||.|..+. +..-+..... ...--.+.|+++.|...+....+. ..+..+..++ ++||.|+++-. +.
T Consensus 899 ~nFSISFWiRi~k~~~~~~~iI~~~~---nNSGWkIsl~~n~IIwtLqD~ngn~k~i~fs~~i~-NkW~FVTITnnRL~~ 974 (1196)
T 3vuo_A 899 NNFTICFWLRFTGKDDDKTRLIGNKV---NNCGWEIYFEDNGLVFEIIDSNGNQESVYLSNVIN-NNWYYISISVDRLKD 974 (1196)
T ss_dssp CCEEEEEEEEECCCCSSCEEEEEEEC---SSCEEEEEEETTEEEEEEECTTCCEEEEEECSCTT-SCCEEEEEEEETTTT
T ss_pred cceeEEEEEEccCCCCCceeEeeecc---cCCCcEEEEeCCcEEEEEEecCCceeeEEEeEeec-ceEEEEEEEecccCc
Confidence 46899999997542 2222222211 255677889999999888765443 3444433333 89999999976 47
Q ss_pred EEEEEEcCccCce
Q psy5025 181 HAYLQVDRFPSSQ 193 (533)
Q Consensus 181 ~~~L~VD~~~~~~ 193 (533)
.+.+.++|.....
T Consensus 975 s~~IYING~Li~~ 987 (1196)
T 3vuo_A 975 QLLIFINDKNVAN 987 (1196)
T ss_dssp EEEEEETTEEEEE
T ss_pred eeEEEECCEEecc
Confidence 7899999976443
No 242
>1lr7_A Follistatin, FS1; heparin-binding, cystine-rich, sucrose octasulphate, hormone/growth factor complex; HET: SO4; 1.50A {Rattus norvegicus} SCOP: g.3.11.3 g.68.1.1 PDB: 1lr8_A* 1lr9_A
Probab=23.53 E-value=59 Score=23.57 Aligned_cols=29 Identities=24% Similarity=0.653 Sum_probs=23.2
Q ss_pred CCCCCCCC-CCCeeeecCC-ceEEecCCCCC
Q psy5025 261 HPCITQPC-GSGSCVPLYD-GYKCVCTQSCK 289 (533)
Q Consensus 261 ~~C~~~pC-ngg~C~~~~~-~~~C~C~~g~~ 289 (533)
++|...+| .|..|+...+ ...|.|+..+.
T Consensus 2 ~~C~~~~C~~g~~C~~~~~~~~~C~C~~~C~ 32 (74)
T 1lr7_A 2 ETCENVDCGPGKKCRMNKKNKPRCVCAPDCS 32 (74)
T ss_dssp CCSTTCCCCTTEEEEECTTSCEEEEECCCGG
T ss_pred CCCCCCcCcCCCEEeECCCCCeeecCCCCCC
Confidence 57899999 9999998654 47999986544
No 243
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=21.81 E-value=27 Score=37.54 Aligned_cols=27 Identities=33% Similarity=0.674 Sum_probs=23.3
Q ss_pred CCC-CCCeeeecCCceEEecCCCCCcCcccce
Q psy5025 266 QPC-GSGSCVPLYDGYKCVCTQSCKESHLTEV 296 (533)
Q Consensus 266 ~pC-ngg~C~~~~~~~~C~C~~g~~G~~c~~~ 296 (533)
..| .+|.|+.. .|.|.+||.|+.|...
T Consensus 539 ~~C~ghG~C~~G----~C~Cd~G~~G~~C~~~ 566 (725)
T 2e26_A 539 DMCSGHGRCVQG----SCVCDEQWGGLYCDEP 566 (725)
T ss_dssp GGGGGSEEEETT----EEEECTTEESTTSCEE
T ss_pred cccCCCcEECCC----CEeeCCCccCCCcCcc
Confidence 378 88999985 7999999999999764
No 244
>1nl1_A Prothrombin; hydrolase; HET: CGU NAG; 1.90A {Bos taurus} SCOP: g.14.1.1 g.32.1.1 PDB: 2pf2_A* 2pf1_A* 1nl2_A* 2spt_A*
Probab=21.74 E-value=21 Score=30.27 Aligned_cols=29 Identities=24% Similarity=0.389 Sum_probs=24.6
Q ss_pred CCCCCeeeeCCC-CceecCCCCCCCCCcccc
Q psy5025 52 CEHGGKCITTPG-SSYCLCPLGFTGDLCQTR 81 (533)
Q Consensus 52 C~NggtC~~~~~-~y~C~C~~g~~G~~Ce~~ 81 (533)
|.+ |.|....+ .|+..+.....|..|+.=
T Consensus 61 C~~-g~C~~g~G~~YRG~~s~T~sG~~Cq~W 90 (147)
T 1nl1_A 61 CLE-GNCAEGVGMNYRGNVSVTRSGIECQLW 90 (147)
T ss_dssp HHH-TSSBCTTSTTCCCCCCBBTTSCBBCCT
T ss_pred CCC-CcCCCCCCCccccccccCCCCCcCCCC
Confidence 888 78998764 499999999999999963
No 245
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=21.57 E-value=57 Score=33.45 Aligned_cols=28 Identities=32% Similarity=0.750 Sum_probs=0.0
Q ss_pred CCCeeeeCCCCc---eecCCCCCCCCCcccc
Q psy5025 54 HGGKCITTPGSS---YCLCPLGFTGDLCQTR 81 (533)
Q Consensus 54 NggtC~~~~~~y---~C~C~~g~~G~~Ce~~ 81 (533)
|...|.+..+.+ .|.|.+||.|+.||=.
T Consensus 465 ~s~~C~~g~G~~~CG~C~C~~G~~G~~CeC~ 495 (503)
T 3v4v_B 465 QAPHCSDGQGHLQCGVCSCAPGRLGRLCESR 495 (503)
T ss_dssp -------------------------------
T ss_pred CCcccCCCCeeEeCCceECcCCCcCCCCCCC
Confidence 455675444445 5689999999999954
No 246
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=21.11 E-value=30 Score=34.25 Aligned_cols=19 Identities=21% Similarity=0.448 Sum_probs=15.9
Q ss_pred CCcee-cCCCCCCCCCcccc
Q psy5025 63 GSSYC-LCPLGFTGDLCQTR 81 (533)
Q Consensus 63 ~~y~C-~C~~g~~G~~Ce~~ 81 (533)
++..| .|..+++|++||.-
T Consensus 332 ~~G~C~~C~~n~~G~~Ce~C 351 (375)
T 4aqt_A 332 HGGHCTNCRDNTDGAKCERC 351 (375)
T ss_dssp CCEEECSCTTTEESTTSCEE
T ss_pred CCCCCCCCCCCCcCCCCCCC
Confidence 55678 59999999999874
No 247
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=20.82 E-value=3.1e+02 Score=25.28 Aligned_cols=22 Identities=36% Similarity=0.993 Sum_probs=18.6
Q ss_pred CCCCCCeeeeCCCCceecCCCCCC
Q psy5025 51 PCEHGGKCITTPGSSYCLCPLGFT 74 (533)
Q Consensus 51 pC~NggtC~~~~~~y~C~C~~g~~ 74 (533)
+|. ..|.+..++|.|.|.+||.
T Consensus 132 ~c~--~~C~n~~g~~~csC~~Gy~ 153 (286)
T 1nt0_A 132 PCD--HYCHXYLGGYYCSCRVGYI 153 (286)
T ss_dssp CCS--SEEEEETTEEEEECCTTEE
T ss_pred cCC--CccccccCceEeecCCCce
Confidence 465 4699999999999999985
No 248
>1oq1_A Protein YESU; structural genomics, singleton, PSI, protein structure initi midwest center for structural genomics, MCSG, unknown funct; 1.70A {Bacillus subtilis} SCOP: b.29.1.17
Probab=20.69 E-value=3.1e+02 Score=24.59 Aligned_cols=66 Identities=9% Similarity=0.147 Sum_probs=0.0
Q ss_pred eccccCCCcEEEEEEEECCEEEEEEcCccCceeeCCCCceeeecCCCEEEcCcCCCCccCCCcccccCceeeeeeEEE
Q psy5025 162 SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLI 239 (533)
Q Consensus 162 ~~~lnDg~Wh~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCI~~l~i 239 (533)
+...+...|++|+|...+..++..||+...-....++....... ..-++| +.......+.+++++|
T Consensus 152 p~~~dan~~Y~i~i~kd~~~v~f~vNg~~lF~~~D~~~~~g~~~-~~G~fG-----------fR~m~~~~~~y~nf~V 217 (223)
T 1oq1_A 152 PSPDDADSPYRMKLIKDKGYVHFSINGLPILEWMDDGSTYGPVL-TKGKIG-----------FRQMAPMKAVYRDFAV 217 (223)
T ss_dssp CCGGGCCSCEEEEEEEETTEEEEEETTEEEEEEECCSSSSSSCC-CSBEEE-----------EEEETTCEEEEEEEEE
T ss_pred CcccCCCCcEEEEEEEeCCEEEEEECCEEEEEeeCCCcccCCCC-CCceEE-----------EEecchhhhhccceEE
No 249
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=20.34 E-value=43 Score=34.95 Aligned_cols=36 Identities=25% Similarity=0.544 Sum_probs=25.7
Q ss_pred CCC-CCC-CCCCCCeeeeCCCCceecCCCC--CCCCCcccc
Q psy5025 45 DKC-NKT-PCEHGGKCITTPGSSYCLCPLG--FTGDLCQTR 81 (533)
Q Consensus 45 d~C-~~~-pC~NggtC~~~~~~y~C~C~~g--~~G~~Ce~~ 81 (533)
+.| .-. ||+|||.- ...+.=.|.|+++ -.|..|+..
T Consensus 351 ~~c~~C~~PC~nn~~~-l~g~~C~C~C~~~~~t~~~~C~~~ 390 (540)
T 3nsj_A 351 ARWQNCSRPCRSGQHK-SSHDSCQCECQDSKVTNQDCCPRQ 390 (540)
T ss_dssp CBCCCTTSCCBTTEEE-CSSCTTCEEESCTTTBCGGGCBSS
T ss_pred CchhhhcccccCCCcc-CCCCceEeeCCCCCCccccccccc
Confidence 456 443 99999854 3346678889987 568888876
Done!